WorldWideScience

Sample records for atlantic cod piscidin

  1. Ubiquitous presence of piscidin-1 in Atlantic cod as evidenced by immunolocalisation

    Directory of Open Access Journals (Sweden)

    Ruangsri Jareeporn

    2012-07-01

    Full Text Available Abstract Background Antimicrobial peptides (AMPs, the natural antibiotics bestowed upon all forms of life, consist of small molecular weight proteins with a broad spectrum antimicrobial activity against a variety of pathogenic microorganisms. Piscidins are one of the AMP families that are imperative for the innate defence mechanisms of teleosts. Atlantic cod, a basal fish belonging to the superorder Paracanthopterygii also possesses multiple piscidin peptides. Two piscidin paralogues (pis1 and pis2 and a novel alternative splice variant of pis2 of this fish were previously described by us. To shed light on other potent roles of these molecules, now we have mapped the distribution of piscidin 1 (Pis1, in different tissues and organs of cod through immunohistochemistry (IHC employing an affinity purified polyclonal antibody specific to Pis1. Results Various cell types and tissues of Atlantic cod including those from the immune organs of naïve fish are armed with Pis1 peptide. Different types of the blood leucocytes and phagocytic cells among the leucocytes examined gave a relatively strong indication of Pis1 immunopositivity. In addition, other cell types such as hematopoietic cells, epithelial cells and multi-granular cells located in the mucosal and hematopoietic tissues were also Pis1-immunoreactive. More interestingly, chondrocytes appear to produce Pis1 and this is the first report on the presence of an AMP in cartilage tissue of fish. Furthermore, Pis1 immunopositivity was detected in other tissues and organs of naïve fish including neural tissues, exocrine and endocrine glands, compound gland cells, excretory kidney, intestinal and respiratory epithelial cells, swim bladder, skin and hypodermis layer, myosepta, liver, heart, eye and oocytes. Conclusions Pis1 peptide is produced by various cell types located in different tissues and organs of Atlantic cod. It is present in all immune-related organs of naïve fish and the elevated peptide

  2. Fisheries. Population of origin of Atlantic cod.

    Science.gov (United States)

    Nielsen, E E; Hansen, M M; Schmidt, C; Meldrup, D; Grønkjaer, P

    2001-09-20

    Most of the world's cod (Gadus morhua) fisheries are now tightly regulated or closed altogether. Being able to link individual fish to their population of origin would assist enormously in policing regulations and in identifying poachers. Here we show that microsatellite genetic markers can be used to assign individual cod from three different populations in the northeastern Atlantic Ocean to their population of origin. PMID:11565021

  3. Occurrence of anisakid nematodes in Atlantic cod (Gadus morhua) and Greenland cod (Gadus ogac), West Greenland

    DEFF Research Database (Denmark)

    Mouritsen, Kim N.; Hedeholm, Rasmus; Schack, Henriette B.;

    2010-01-01

    Anisakid nematodes commonly infect gadids, and are of economic and aesthetic importance to the commercial fishing industry in Greenland as some species are pathogenic to humans. However, very little is known about the occurrence of these parasites and their impact on the hosts in Greenland waters....... During a survey in 2005, stomach sample of 227 Atlantic cod (Gadus morhua) and 64 Greenland cod (Gadus ogac) was collected in Godthaab and Sisimiut fiord systems in West Greenland waters. All cod were dissected for stomach contents and anisakid nematodes were removed from the visceral cavity. Third stage...... nematode species regarding prevalence of infection and mean infection intensity was evident, and there was no relationship between fish condition and the intensity of nematode infections. Standardised for size, capelin-eating cod were in better condition and more heavily infected than fish subsisting...

  4. Structure of chymotrypsin variant B from Atlantic cod, Gadus morhua

    DEFF Research Database (Denmark)

    Leth-Larsen, Rikke; Asgeirsson, B; Thórólfsson, M;

    1996-01-01

    The amino-acid sequence of chymotrypsin variant B isolated from the pyloric caeca of Atlantic cod has been elucidated. The characterization of the primary structure is based on N-terminal Edman degradation and mass spectrometry of the native protein and enzymatically derived peptides. Chymotrypsi...

  5. The effects of temperature and hatchery-rearing conditions on juvenile Atlantic cod (Gadus morhua) behavior

    OpenAIRE

    Theodorou, Panagiotis, 1983-

    2010-01-01

    Atlantic cod (Gadus morhua) is a demersal gadoid that has been one of the most important species in the North Atlantic fisheries for more than 500 years, with major economic, ecological and cultural significance. However, in the past few decades many of the cod stocks have declined dramatically, because of overfishing and changes in the physical environment with major reorganizations of cod ecosystems. Early in their first year of life Atlantic cod juveniles undergo a transition from pela...

  6. Automatic grunt detector and recognizer for Atlantic cod (Gadus morhua).

    Science.gov (United States)

    Urazghildiiev, Ildar R; Van Parijs, Sofie M

    2016-05-01

    Northwest Atlantic cod (Gadus morhua) have been heavily overfished in recent years and have not yet recovered. Passive acoustic technology offers a new approach to identify the spatial location of spawning fish, as well as their seasonal and long term persistence in an area. To date, the lack of a species-specific detector has made searching for Atlantic cod grunts in large amounts of passive acoustic data cumbersome. To address this problem, an automatic grunt detection and recognition algorithm that processes yearlong passive acoustic data recordings was designed. The proposed technique is a two-stage hypothesis testing algorithm that includes detecting and recognizing all grunt-like sounds. Test results demonstrated that the algorithm provided a detection probability of 0.93 for grunts with a signal-to-noise ratio (SNR) higher than 10 dB, and a detection probability of 0.8 for grunts with the SNR ranging from 3 to 10 dB. This detector is being used to identify cod in current and historical data from U.S. waters. Its use has significantly reduced the time required to find and validate the presence of cod grunts. PMID:27250148

  7. Excess post hypoxic oxygen consumption in Atlantic cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Plambech, M.; Deurs, Mikael van; Steffensen, J.F.;

    2013-01-01

    Atlantic cod Gadus morhua experienced oxygen deficit (DO2 ) when exposed to oxygen levels below their critical level (c. 73% of pcrit) and subsequent excess post-hypoxic oxygen consumption (CEPHO) upon return to normoxic conditions, indicative of an oxygen debt. The mean±s.e. CEPHO:DO2 was 6·9±1·......·9±1·5, suggesting that resorting to anaerobic energy production in severe hypoxia is energetically expensive...

  8. Genomic characterization of the Atlantic cod sex-locus.

    Science.gov (United States)

    Star, Bastiaan; Tørresen, Ole K; Nederbragt, Alexander J; Jakobsen, Kjetill S; Pampoulie, Christophe; Jentoft, Sissel

    2016-01-01

    A variety of sex determination mechanisms can be observed in evolutionary divergent teleosts. Sex determination is genetic in Atlantic cod (Gadus morhua), however the genomic location or size of its sex-locus is unknown. Here, we characterize the sex-locus of Atlantic cod using whole genome sequence (WGS) data of 227 wild-caught specimens. Analyzing more than 55 million polymorphic loci, we identify 166 loci that are associated with sex. These loci are located in six distinct regions on five different linkage groups (LG) in the genome. The largest of these regions, an approximately 55 Kb region on LG11, contains the majority of genotypes that segregate closely according to a XX-XY system. Genotypes in this region can be used genetically determine sex, whereas those in the other regions are inconsistently sex-linked. The identified region on LG11 and its surrounding genes have no clear sequence homology with genes or regulatory elements associated with sex-determination or differentiation in other species. The functionality of this sex-locus therefore remains unknown. The WGS strategy used here proved adequate for detecting the small regions associated with sex in this species. Our results highlight the evolutionary flexibility in genomic architecture underlying teleost sex-determination and allow practical applications to genetically sex Atlantic cod. PMID:27499266

  9. Atlantic cod (Gadus morhua hemoglobin genes: multiplicity and polymorphism

    Directory of Open Access Journals (Sweden)

    Gamperl A Kurt

    2009-09-01

    Full Text Available Abstract Background Hemoglobin (Hb polymorphism, assessed by protein gel electrophoresis, has been used almost exclusively to characterize the genetic structure of Atlantic cod (Gadus morhua populations and to establish correlations with phenotypic traits such as Hb oxygen binding capacity, temperature tolerance and growth characteristics. The genetic system used to explain the results of gel electrophoresis entails the presence of one polymorphic locus with two major alleles (HbI-1; HbI-2. However, vertebrates have more than one gene encoding Hbs and recent studies have reported that more than one Hb gene is present in Atlantic cod. These observations prompted us to re-evaluate the number of Hb genes expressed in Atlantic cod, and to perform an in depth search for polymorphisms that might produce relevant phenotypes for breeding programs. Results Analysis of Expressed Sequence Tags (ESTs led to the identification of nine distinct Hb transcripts; four corresponding to the α Hb gene family and five to the β Hb gene family. To gain insights about the Hb genes encoding these transcripts, genomic sequence data was generated from heterozygous (HbI-1/2 parents and fifteen progeny; five of each HbI type, i.e., HbI-1/1, HbI-1/2 and HbI-2/2. β Hb genes displayed more polymorphism than α Hb genes. Two major allele types (β1A and β1B that differ by two linked non-synonymous substitutions (Met55Val and Lys62Ala were found in the β1 Hb gene, and the distribution of these β1A and β1B alleles among individuals was congruent with that of the HbI-1 and HbI-2 alleles determined by protein gel electrophoresis. RT-PCR and Q-PCR analysis of the nine Hb genes indicates that all genes are expressed in adult fish, but their level of expression varies greatly; higher expression of almost all Hb genes was found in individuals displaying the HbI-2/2 electrophoretic type. Conclusion This study indicates that more Hb genes are present and expressed in adult

  10. Atlantic Cod (Gadus morhua benefits from the availability of seagrass (Zostera marina nursery habitat

    Directory of Open Access Journals (Sweden)

    Richard J. Lilley

    2014-12-01

    Full Text Available The Atlantic cod (Gadus morhua is a species of significant economic and historic importance but infamous for its decline. Apart from overfishing, the causes of this decline and its subsequent lack of recovery remain largely unresolved. Indeed, the degree to which specific habitats are important for this species remains unquantified at the scale of North Atlantic. Here, the literature on the role of eelgrass meadows (Zostera marina as valuable nursery habitat for the Atlantic cod is reviewed and synthesized. Evidence is presented on relative densities of Atlantic cod in shallow water environments and in eelgrass meadows in comparison to alternative habitats. In addition, evidence pertaining to the ’viability gains’ attributed to the use of eelgrass meadows as nursery habitat (growth and survival by juvenile Atlantic cod is analyzed. Although juvenile Atlantic cod use of Z. marina is found to be facultative, when possible, available literatures indicates that they may select Z. marina as a nursery habitat where they are found in high density (average of at least 246 ha−1. From their use of Z. marina habitat the juvenile Atlantic cod receives viability benefits from it, improving their chances of reaching maturation. This paper provides strong evidence that eelgrass meadows are of significant importance to contributing to Atlantic cod stocks.

  11. A genomic island linked to ecotype divergence in Atlantic cod

    DEFF Research Database (Denmark)

    Hansen, Jakob Hemmer; Eg Nielsen, Einar; Therkildsen, Nina O.;

    2013-01-01

    gene flow and large effective population sizes, properties which theoretically could restrict divergence in local genomic regions. We identify a genomic region of strong population differentiation, extending over approximately 20 cM, between pairs of migratory and stationary ecotypes examined at two......The genomic architecture underlying ecological divergence and ecological speciation with gene flow is still largely unknown for most organisms. One central question is whether divergence is genome‐wide or localized in ‘genomic mosaics’ during early stages when gene flow is still pronounced....... Empirical work has so far been limited, and the relative impacts of gene flow and natural selection on genomic patterns have not been fully explored. Here, we use ecotypes of Atlantic cod to investigate genomic patterns of diversity and population differentiation in a natural system characterized by high...

  12. Analysing migrations of Atlantic cod Gadus morhua in the north‐east Atlantic Ocean

    DEFF Research Database (Denmark)

    Neuenfeldt, S.; Righton, D.; Neat, F.;

    2013-01-01

    descriptions, separation of reproductively isolated populations, timing and areas of spawning, tidal transport and use of protected areas. The examples are based on archival tag data from the North Sea, the Baltic Sea, the Barents Sea and Faroese and Icelandic Waters. Besides presenting the state......-of-the-art geolocations for cod Gadus morhua in the north-east Atlantic Ocean, the major aim of this review is to raise awareness of gaps in knowledge and to identify ideas for new research...

  13. Bay-scale population structure in coastal Atlantic cod in Labrador and Newfoundland, Canada

    DEFF Research Database (Denmark)

    Ruzzante, D.E.; Wroblewski, J.S.; Taggart, C.T.;

    2000-01-01

    Polymorphisms at five microsatellite DNA loci provide evidence that Atlantic cod Gadus morhua inhabiting Gilbert Bay, Labrador are genetically distinguishable from offshore cod on the north- east Newfoundland shelf and from inshore cod in Trinity Bay, Newfoundland. Antifreeze activity in the blood...... of population structure suggest that important barriers to gene flow exist among five components that include two inshore (Gilbert and Trinity Bay) and three offshore cod aggregations on the north-east Newfoundland Shelf and the Grand Bank. D-A and D-SW estimates of genetic distance that involve Gilbert Bay cod...

  14. Population genetic structure in gadoid fish with focus on Atlantic cod Gadus morhua

    OpenAIRE

    Guðni Magnús Eiríksson 1970

    2015-01-01

    In the present study genetic variation and population genetic structure in spawning Atlantic cod, Gadus morhua, around Iceland was examined. Earlier research on population genetic structure in cod has not been conclusive and the use of different molecular methods have shown different patterns. It is important to determine why different methods show different patterns in order to describe the population genetic structure in cod. In the present study both microsatellite DNA variation and mitoch...

  15. Evaluation of Electrical Stunning of Atlantic Cod (Gadus morhua) and Turbot (Psetta maxima) in Seawater

    NARCIS (Netherlands)

    Lambooij, E.; Digre, H.; Erikson, U.; Reimert, H.G.M.; Burggraaf, D.; Vis, van de J.W.

    2013-01-01

    The aim of this study was to assess electrical stunning of Atlantic cod and turbot in seawater to develop a protocol for the process of stunning and killing. An induced general epileptiform insult (unconscious) had a duration of 40 ± 27 s (n =14) in cod (2.6 ± 0.5 kg) and 34 ± 18 s (n = 19) in turbo

  16. The genome sequence of Atlantic cod reveals a unique immune system

    OpenAIRE

    Star, Bastiaan; Nederbragt, Alexander Johan; Jentoft, Sissel; Grimholt, Unni; Malmstrøm, Martin; Gregers, Tone Fredsvik; Rounge, Trine Ballestad; Paulsen, Jonas; Solbakken, Monica Hongrø; Sharma, Animesh; Wetten, Ola Frang; Lanzén, Anders; Winer, Roger; Knight, James; Vogel, Jan-Hinnerk

    2011-01-01

    Atlantic cod (Gadus morhua) is a large, cold-adapted teleost that sustains long-standing commercial fisheries and incipient aquaculture1, 2. Here we present the genome sequence of Atlantic cod, showing evidence for complex thermal adaptations in its haemoglobin gene cluster and an unusual immune architecture compared to other sequenced vertebrates. The genome assembly was obtained exclusively by 454 sequencing of shotgun and paired-end libraries, and automated annotation identified 22,154 gen...

  17. The genome sequence of Atlantic cod reveals a unique immune system

    OpenAIRE

    Star, Bastiaan; Nederbragt, Alexander Johan; Jentoft, Sissel; Grimholt, Unni; Malmstrøm, Martin; Gregers, Tone Fredsvik; Rounge, Trine Ballestad; Paulsen, Jonas; Solbakken, Monica Hongrø; Sharma, Animesh; Wetten, Ola Frang; Lanzén, Anders; Winer, Roger; Knight, James; Vogel, Jan-Hinnerk

    2011-01-01

    Atlantic cod (Gadus morhua) is a large, cold-adapted teleost that sustains long-standing commercial fisheries and incipient aquaculture. Here we present the genome sequence of Atlantic cod, showing evidence for complex thermal adaptations in its haemoglobin gene cluster and an unusual immune architecture compared to other sequenced vertebrates. The genome assembly was obtained exclusively by 454 sequencing of shotgun and paired-end libraries, and automated annotation identified 22,154 genes. ...

  18. Long Distance Linkage Disequilibrium and Limited Hybridization Suggest Cryptic Speciation in Atlantic Cod

    OpenAIRE

    Bradbury, Ian R.; Sharen Bowman; Tudor Borza; Snelgrove, Paul V. R.; Hutchings, Jeffrey A; Berg, Paul R.; Naiara Rodríguez-Ezpeleta; Jackie Lighten; Ruzzante, Daniel E.; Christopher Taggart; Paul Bentzen

    2014-01-01

    Hybrid zones provide unprecedented opportunity for the study of the evolution of reproductive isolation, and the extent of hybridization across individuals and genomes can illuminate the degree of isolation. We examine patterns of interchromosomal linkage disequilibrium (ILD) and the presence of hybridization in Atlantic cod, Gadus morhua, in previously identified hybrid zones in the North Atlantic. Here, previously identified clinal loci were mapped to the cod genome with most (∼70%) occurri...

  19. Vaccination of Atlantic cod (Gadus morhua L.) against atypical furunculosis using different adjuvants

    OpenAIRE

    Hamid, Lemia M.O

    2003-01-01

    In recent years increased attention has been focussed on fish vaccines and vaccination against diseases in farmed fish. In this study, efficacy and side effects of vaccination against atypical furunculosis in Atlantic cod (Gadus morhua L.) were studied in an experimental trial by using different adjuvants. The different adjuvanted vaccines were administered by intraperitoneal injection (i.p.) to Atlantic cod. The adjuvants used were CpG DNA, Aluminium hydroxide (Alhydrogel), an...

  20. Transferrin gene polymorphisms and population genetic studies of Atlantic cod (Gadus morhua)

    Institute of Scientific and Technical Information of China (English)

    Berhan Asmamaw

    2016-01-01

    Objective:To detect single nucleotide polymorphisms (SNPs) in the cod transferrin gene by comparing the sequences from Norwegian (North East Atlantic Ocean) and Canadian (North West Atlantic Ocean) specimen, and to quantify the genetic variation and differentiation in East and West Atlantic cod populations. Methods:cDNA sequences between individuals of Canadian (North West Atlantic Ocean) and Norwegian (North East Atlantic Ocean) origin were aligned. Allele frequencies of theSNPs were used to discriminate the different Atlantic cod populations in West/East Atlantic Ocean, and the Baltic Sea. Results: The sequence alignment detected19SNPs, of which 18 of them resulted in amino acid changes in the transferrin protein. Nonsynonymous to synonymous site substitution ratio (dn/ds) was by far greater than 1 providing an evidence for the existence of positive selection. The West Atlantic cod populations showed high values of heterozygosity and the Baltic populations were found to be inbred. Conclusions: This study identified and indicated transferrin gene polymorphisms that can be used for population differentiations.

  1. Multidimensionality of behavioural phenotypes in Atlantic cod, Gadus morhua.

    Science.gov (United States)

    Meager, Justin J; Fernö, Anders; Skjæraasen, Jon Egil; Järvi, Torbjörn; Rodewald, Petra; Sverdrup, Gisle; Winberg, Svante; Mayer, Ian

    2012-06-25

    Much of the inter-individual variation observed in animal behaviour is now attributed to the existence of behavioural phenotypes or animal personalities. Such phenotypes may be fundamental to fisheries and aquaculture, yet there have been few detailed studies of this phenomenon in exploited marine animals. We investigated the behavioural and neuroendocrine responses of Atlantic cod (Gadus morhua L.), to situations reflecting critical ecological challenges: predator attacks and territorial challenges. Both hatchery-reared and wild fish were tested and behavioural profiles were compared with baseline conditions. We then used an objective, multivariate approach, rather than assigning individuals along one-dimensional behavioural axes, to examine whether distinct behavioural phenotypes were present. Our results indicate that two distinct behavioural phenotypes were evident in fish from each background. In hatchery-reared fish, phenotypes displayed divergent locomotor activity, sheltering, brain monoamine concentrations and responses to competitive challenges. In wild fish, phenotypes were distinguished primarily by locomotor activity, sheltering and responsiveness to predator stimuli. Hatcheries presumably represent a more stressful social environment, and social behaviour and neuroendocrine responses were important in discerning behavioural phenotypes in hatchery fish, whereas antipredator responses were important in discerning phenotypes in wild fish that have previously encountered predators. In both fish types, behavioural and physiological traits that classified individuals into phenotypes were not the same as those that were correlated across situations. These results highlight the multidimensionality of animal personalities, and that the processes that regulate one suite of behavioural traits may be very different to the processes that regulate other behaviours. PMID:22465310

  2. Differences in salinity tolerance and gene expression between two populations of Atlantic cod (Gadus morhua) in response to salinity stress

    DEFF Research Database (Denmark)

    Larsen, Peter Foged; Eg Nielsen, Einar; Meier, Kristian;

    2012-01-01

    in salinity tolerance and gene expression among Atlantic cod (Gadus morhua) from two populations distributed across a steep salinity gradient, we observed high mortality (45% North Sea cod and 80% Baltic Sea cod) in a reciprocal common garden setup. Quantitative RT-PCR assays for expression of hsp70 and Na....... The findings strongly suggest that Atlantic cod are adapted to local saline conditions, despite relatively low levels of neutral genetic divergence between populations...

  3. Diel variation in feeding and movement patterns of juvenile Atlantic cod at offshore wind farms

    Science.gov (United States)

    Reubens, Jan T.; De Rijcke, Maarten; Degraer, Steven; Vincx, Magda

    2014-01-01

    Atlantic cod (Gadus morhua) is a commercially important fish species suffering from overexploitation in the North-East Atlantic. In recent years, their natural environment is being intensively altered by the construction of offshore wind farms in many coastal areas. These constructions form artificial reefs influencing local biodiversity and ecosystem functioning. It has been demonstrated that Atlantic cod is present in the vicinity of these constructions. However, empirical data concerning the diel activity and feeding behaviour of Atlantic cod in the vicinity of these artificial reefs is lacking. Atlantic cod has a flexible diel activity cycle linked to spatio-temporal variations in food availability and predation risk. In this study we integrated acoustic telemetry with stomach content analysis to quantify diel activity and evaluate diel feeding patterns at a windmill artificial reef (WAR) in the Belgian part of the North Sea. Atlantic cod exhibited crepuscular movements related to feeding activity; a 12 h cycle was found and the highest catch rates and stomach fullness were recorded close to sunset and sunrise. It is suggested that the observed diel movement pattern is related to the prey species community and to predation pressure. Foraging at low ambient light levels (i.e. at dusk and dawn) probably causes a trade-off between foraging success and reducing predation pressure. Fish did not leave the area in-between feeding periods. Hence other benefits (i.e. shelter against currents and predators) besides food availability stimulate the aggregation behaviour at the WARs.

  4. Three chromosomal rearrangements promote genomic divergence between migratory and stationary ecotypes of Atlantic cod

    OpenAIRE

    Berg, Paul R; Bastiaan Star; Christophe Pampoulie; Marte Sodeland; Julia M I Barth; Halvor Knutsen; Jakobsen, Kjetill S.; Sissel Jentoft

    2016-01-01

    Identification of genome-wide patterns of divergence provides insight on how genomes are influenced by selection and can reveal the potential for local adaptation in spatially structured populations. In Atlantic cod – historically a major marine resource – Northeast-Arctic- and Norwegian coastal cod are recognized by fundamental differences in migratory and non-migratory behavior, respectively. However, the genomic architecture underlying such behavioral ecotypes is unclear. Here, we have ana...

  5. Automatic feeding and Harvesting of Juvenile Atlantic Cod (Gadus Morhua L. in a Pond

    Directory of Open Access Journals (Sweden)

    V. Øiestad

    1987-01-01

    Full Text Available Large scale production of juvenile Atlantic cod has been carried out since 1980 in a saltwater pond. A break-through was obtained in 1983 with high survival rates of cod larvae to metamorphosis. In 1985 we made progress in two fiels, reduced cannibalism and automatic harvesting. Juvenile cod formed large schools while fed dry pellets in the currents set up by five propellers. An underwater loudspeaker was programmed to give sound pulses just before feeding. During harvesting dry pellets were released inside a fish trap while giving the sound signals the cod juveniles were conditioned to. The cod readily entered the trap and a computer-controlled fish pump transported the fish from the fish trap into a storing tank and grading grids. The trap gradually emptied the pond of fish and more than 80

  6. Demography of coastal Atlantic cod in relation to the establishment of a marine protected area

    OpenAIRE

    Nordahl, Jan-Harald

    2012-01-01

    Use a mark-recapture approach to study the demography of Atlantic cod (Gadus morhua) in a small (1 km2) marine protected area (MPA) on the Norwegian Skagerrak coast. A total of 9713 Atlantic cod where tagged during 2005-2010. Inside the MPA, only hook and line fishing is allowed. Data are partly live capture-recaptures from the research fishing activity, and partly dead recoveries from commercial and recreational fishers. A high-reward system was applied to quantify the tag reporting rate fro...

  7. The effect of external dummy transmitters on oxygen consumption and performance of swimming Atlantic cod

    DEFF Research Database (Denmark)

    Steinhausen, M.F.; Andersen, Niels Gerner; Steffensen, J.F.

    2006-01-01

    Decreased critical swimming speed and increased oxygen consumption (Mo-2) was found for externally tagged Atlantic cod Gadus morhua swimming at a high speed of 0 center dot 9 body length (total length, L-Gamma) s(-1). No difference was found in the standard metabolic rate, indicating...

  8. Atlantic Cod Show a Highly Variable Sensitivity to Electric-Induced Spinal Injuries

    NARCIS (Netherlands)

    Soetaert, M.; Haan, de D.; Verschueren, B.; Decostere, A.; Puvanendran, V.; Saunders, J.; Polet, H.; Chiers, K.

    2016-01-01

    Pulse trawling is the most promising alternative to conventional beam trawls targeting Sole Solea solea (also known as Solea vulgaris), but due to the electric fields created by electrotrawls spinal injuries are reported in gadoid round fishes such as Atlantic Cod Gadus morhua. This study aimed t

  9. Characterization of Atlantic cod spawning habitat and behavior in Icelandic coastal waters.

    Directory of Open Access Journals (Sweden)

    Timothy B Grabowski

    Full Text Available The physical habitat used during spawning may potentially be an important factor affecting reproductive output of broadcast spawning marine fishes, particularly for species with complex, substrate-oriented mating systems and behaviors, such as Atlantic cod Gadus morhua. We characterized the habitat use and behavior of spawning Atlantic cod at two locations off the coast of southwestern Iceland during a 2-d research cruise (15-16 April 2009. We simultaneously operated two different active hydroacoustic gear types, a split beam echosounder and a dual frequency imaging sonar (DIDSON, as well as a remotely operated underwater vehicle (ROV. A total of five fish species were identified through ROV surveys: including cusk Brosme brosme, Atlantic cod, haddock Melanogrammus aeglefinus, lemon sole Microstomus kitt, and Atlantic redfish Sebastes spp. Of the three habitats identified in the acoustic surveys, the transitional habitat between boulder/lava field and sand habitats was characterized by greater fish density and acoustic target strength compared to that of sand or boulder/lava field habitats independently. Atlantic cod were observed behaving in a manner consistent with published descriptions of spawning. Individuals were observed ascending 1-5 m into the water column from the bottom at an average vertical swimming speed of 0.20-0.25 m s(-1 and maintained an average spacing of 1.0-1.4 m between individuals. Our results suggest that cod do not choose spawning locations indiscriminately despite the fact that it is a broadcast spawning fish with planktonic eggs that are released well above the seafloor.

  10. Daily rhythmicity of clock gene transcripts in atlantic cod fast skeletal muscle.

    Directory of Open Access Journals (Sweden)

    Carlo C Lazado

    Full Text Available The classical notion of a centralized clock that governs circadian rhythmicity has been challenged with the discovery of peripheral oscillators that enable organisms to cope with daily changes in their environment. The present study aimed to identify the molecular clock components in Atlantic cod (Gadus morhua and to investigate their daily gene expression in fast skeletal muscle. Atlantic cod clock genes were closely related to their orthologs in teleosts and tetrapods. Synteny was conserved to varying degrees in the majority of the 18 clock genes examined. In particular, aryl hydrocarbon receptor nuclear translocator-like 2 (arntl2, RAR-related orphan receptor A (rora and timeless (tim displayed high degrees of conservation. Expression profiling during the early ontogenesis revealed that some transcripts were maternally transferred, namely arntl2, cryptochrome 1b and 2 (cry1b and cry2, and period 2a and 2b (per2a and per2b. Most clock genes were ubiquitously expressed in various tissues, suggesting the possible existence of multiple peripheral clock systems in Atlantic cod. In particular, they were all detected in fast skeletal muscle, with the exception of neuronal PAS (Per-Arnt-Single-minded domain-containing protein (npas1 and rora. Rhythmicity analysis revealed 8 clock genes with daily rhythmic expression, namely arntl2, circadian locomotor output cycles kaput (clock, npas2, cry2, cry3 per2a, nuclear receptor subfamily 1, group D, member 1 (nr1d1, and nr1d2a. Transcript levels of the myogenic genes myogenic factor 5 (myf5 and muscleblind-like 1 (mbnl1 strongly correlated with clock gene expression. This is the first study to unravel the molecular components of peripheral clocks in Atlantic cod. Taken together, our data suggest that the putative clock system in fast skeletal muscle of Atlantic cod has regulatory implications on muscle physiology, particularly in the expression of genes related to myogenesis.

  11. Preferred temperature of juvenile Atlantic cod Gadus morhua with different haemoglobin genotypes at normoxia and moderate hypoxia

    DEFF Research Database (Denmark)

    Petersen, Maria Faldborg; Steffensen, John Fleng

    2003-01-01

    was the case for HbI-1 cod, which preferred 9.8+/-1.8 degrees C during hypoxia, whereas HbI-2 cod did not show this effect. The results indicate that environmental temperature changes will lead to a distributional change in the different haemoglobin types of Atlantic cod, global warming providing an...... advantage for HbI-1 cod. However, since HbI-1 cod prefer a low temperature under hypoxic conditions, a combination of increased water temperature and hypoxia could be unfavourable for Atlantic cod stocks....... in northern regions, and the HbI(1) allele dominant in warmer areas. To determine if temperature is a selective parameter in the distribution of the haemoglobin types, the preferred temperature of the homozygous genotypes HbI-1 and HbI-2 was measured. We found that HbI-2 cod preferred a temperature...

  12. Three chromosomal rearrangements promote genomic divergence between migratory and stationary ecotypes of Atlantic cod.

    Science.gov (United States)

    Berg, Paul R; Star, Bastiaan; Pampoulie, Christophe; Sodeland, Marte; Barth, Julia M I; Knutsen, Halvor; Jakobsen, Kjetill S; Jentoft, Sissel

    2016-01-01

    Identification of genome-wide patterns of divergence provides insight on how genomes are influenced by selection and can reveal the potential for local adaptation in spatially structured populations. In Atlantic cod - historically a major marine resource - Northeast-Arctic- and Norwegian coastal cod are recognized by fundamental differences in migratory and non-migratory behavior, respectively. However, the genomic architecture underlying such behavioral ecotypes is unclear. Here, we have analyzed more than 8.000 polymorphic SNPs distributed throughout all 23 linkage groups and show that loci putatively under selection are localized within three distinct genomic regions, each of several megabases long, covering approximately 4% of the Atlantic cod genome. These regions likely represent genomic inversions. The frequency of these distinct regions differ markedly between the ecotypes, spawning in the vicinity of each other, which contrasts with the low level of divergence in the rest of the genome. The observed patterns strongly suggest that these chromosomal rearrangements are instrumental in local adaptation and separation of Atlantic cod populations, leaving footprints of large genomic regions under selection. Our findings demonstrate the power of using genomic information in further understanding the population dynamics and defining management units in one of the world's most economically important marine resources. PMID:26983361

  13. Spatiotemporal SNP analysis reveals pronounced biocomplexity at the northern range margin of Atlantic cod Gadus morhua

    DEFF Research Database (Denmark)

    Therkildsen, Nina Overgaard; Hansen, Jakob Hemmer; Hedeholm, R.B.;

    2013-01-01

    Accurate prediction of species distribution shifts in the face of climate change requires a sound understanding of population diversity and local adaptations. Previous modeling has suggested that global warming will lead to increased abundance of Atlantic cod (Gadus morhua) in the ocean around...... Greenland, but the dynamics of earlier abundance fluctuations are not well understood. We applied a retrospective spatiotemporal population genomics approach to examine the temporal stability of cod population structure in this region and to search for signatures of divergent selection over a 78-year period...

  14. Time matters: post-surgical recovery of gastric evacuation rate in Atlantic cod

    DEFF Research Database (Denmark)

    Behrens, Jane; Gräns, Albin; Andersen, Niels Gerner;

    GER was affected after surgically introducing dummies of a blood-flow biotelemetry system into the abdominal cavity of Atlantic cod. Two days post surgery the cod with implants were, together with a control group, force-fed a standardized meal and the stomach contents recovered 24h later....... This procedure was repeated for both groups of fish after one additional week of recovery. After two days GER was significantly lower in the group of fish with surgical implants compared to the control group, but the difference was not maintained after one additional week of recovery. We conclude that 10 days...... of postsurgical recovery will stabilize GER in cod. The results indicate that the presence of the implant per se did not affect GER but that the effects observed came from surgery and/or postsurgical stress. 10 days should consequently be a starting point for future studies even if longer recovery periods...

  15. Effects of Loma morhua (Microsporidia) infection on the cardiorespiratory performance of Atlantic cod Gadus morhua (L).

    Science.gov (United States)

    Powell, M D; Gamperl, A K

    2016-02-01

    The microsporidian Loma morhua infects Atlantic cod (Gadus morhua) in the wild and in culture and results in the formation of xenomas within the gill filaments, heart and spleen. Given the importance of the two former organs to metabolic capacity and thermal tolerance, the cardiorespiratory performance of cod with a naturally acquired infection of Loma was measured during an acute temperature increase (2 °C h(-1) ) from 10 °C to the fish's critical thermal maximum (CTMax ). In addition, oxygen consumption and swimming performance were measured during two successive critical swimming speed (Ucrit ) tests at 10 °C. While Loma infection had a negative impact on cod cardiac function at warm temperatures, and on metabolic capacity in both the CTMax and Ucrit tests (i.e. a reduction of 30-40%), it appears that the Atlantic cod can largely compensate for these Loma-induced cardiorespiratory limitations. For example, (i) CTMax (21.0 ± 0.3 °C) and Ucrit (~1.75 BL s(-1) ) were very comparable to those reported in previous studies using uninfected fish from the same founder population; and (ii) our data suggest that tissue oxygen extraction, and potentially the capacity for anaerobic metabolism, is enhanced in fish infected with this microsporidian. PMID:25683657

  16. The effects of WAF and CEWAF on EROD activity in juvenile Atlantic cod

    International Nuclear Information System (INIS)

    The affects of dispersed oil and hydrocarbons on Atlantic cod were examined in this study in which water accommodated fractions (WAF) of two types of oil were generated in a wave tank or in a baffled flask. Oil droplet sizes of the two systems were comparable. Chemically enhanced water accommodated fractions (CEWAF) of combinations of two oils and two dispersants were prepared in a similar manner. Juvenile Atlantic cod (Gadus morhua) were exposed to a broad range of concentrations of either WAF or CEWAF before being transferred to clean seawater. Periodic sampling of 5 fish confirmed the liver ethoxyresorufin-O-deethylas (EROD) activity. At the end of a 4 hour exposure, EROD activity was no different from the controls, but it was much higher after 20 hours at CEWAF concentrations above 2 percent v/v regardless of oil or dispersant type. Over the next 48 hours, EROD activity declined and did not return to control or pre-treatment levels even after 72 hours. EROD in livers from cod exposed to WAF was much higher after 24 hours at concentrations of 12 percent v/v or higher, reaching a maximum of 8 picomoles/mg protein/min. After 72 hours, EROD activity in WAF-exposed livers decreased to pre-treatment levels. The study showed that a brief 4 hour exposure to WAF and CEWAF can induce EROD activity in livers of juvenile cod and that the surge in enzyme activity can continue for 24-48 hours.

  17. An Integrated Approach to Gene Discovery and Marker Development in Atlantic Cod (Gadus morhua)

    OpenAIRE

    Bowman, Sharen; Hubert, Sophie; Higgins, Brent; Stone, Cynthia; Kimball, Jennifer; Borza, Tudor; Bussey, Jillian Tarrant; Simpson, Gary; Kozera, Catherine; Curtis, Bruce A.; Hall, Jennifer R.; Hori, Tiago S.; Feng, Charles Y.; Rise, Marlies; Booman, Marije

    2010-01-01

    Atlantic cod is a species that has been overexploited by the capture fishery. Programs to domesticate this species are underway in several countries, including Canada, to provide an alternative route for production. Selective breeding programs have been successfully applied in the domestication of other species, with genomics-based approaches used to augment conventional methods of animal production in recent years. Genomics tools, such as gene sequences and sets of variable markers, also hav...

  18. Male size composition affects male reproductive variance in Atlantic cod Gadus morhua L. spawning aggregations

    DEFF Research Database (Denmark)

    Bekkevold, Dorte

    2006-01-01

    Estimates of Atlantic cod Gadus morhua reproductive success, determined using experimental spawning groups and genetic paternity assignment of offspring, showed that within-group variance in male size correlated positively with the degree of male mating skew, predicting a decrease in male...... reproductive skew with decreasing size variation among males under natural conditions. (c) 2006 The Author Journal compilation (c) 2006 The Fisheries Society of the British Isles...

  19. Effects of alkylphenols (C4-C7) on the reproductive system of Atlantic cod (Gadus morhua)

    OpenAIRE

    Meier, Sonnich

    2007-01-01

    The work in this thesis is a part of a strategic work at the Institute of Marine Research, which aims to develop a variety of methods to be used in investigating potential endocrine disruption in Atlantic cod (Gadus morhua). Produced water, a by-product of offshore oil production, contains significant amounts of alkylphenols (APs). Many studies have shown that long-chain para-substituated APs cause endocrine disruption in freshwater fish, but relatively little is currently know...

  20. The effect of regulation changes and influential factors on Atlantic cod discards in the Baltic Sea demersal trawl fishery

    DEFF Research Database (Denmark)

    Feekings, Jordan; Lewy, Peter; Madsen, Niels

    2013-01-01

    The proportion of Atlantic cod (Gadus morhua) discarded in the Danish Baltic Sea cod trawl fishery has been as high as 40%. This, combined with a stock that has declined dramatically over the past 30 years, has led to numerous technical regulations being introduced to reduce the capture of juveni...

  1. Long distance linkage disequilibrium and limited hybridization suggest cryptic speciation in atlantic cod.

    Directory of Open Access Journals (Sweden)

    Ian R Bradbury

    Full Text Available Hybrid zones provide unprecedented opportunity for the study of the evolution of reproductive isolation, and the extent of hybridization across individuals and genomes can illuminate the degree of isolation. We examine patterns of interchromosomal linkage disequilibrium (ILD and the presence of hybridization in Atlantic cod, Gadus morhua, in previously identified hybrid zones in the North Atlantic. Here, previously identified clinal loci were mapped to the cod genome with most (∼70% occurring in or associated with (<5 kb coding regions representing a diverse array of possible functions and pathways. Despite the observation that clinal loci were distributed across three linkage groups, elevated ILD was observed among all groups of clinal loci and strongest in comparisons involving a region of low recombination along linkage group 7. Evidence of ILD supports a hypothesis of divergence hitchhiking transitioning to genome hitchhiking consistent with reproductive isolation. This hypothesis is supported by Bayesian characterization of hybrid classes present and we find evidence of common F1 hybrids in several regions consistent with frequent interbreeding, yet little evidence of F2 or backcrossed individuals. This work suggests that significant barriers to hybridization and introgression exist among these co-occurring groups of cod either through strong selection against hybrid individuals, or genetic incompatibility and intrinsic barriers to hybridization. In either case, the presence of strong clinal trends, and little gene flow despite extensive hybridization supports a hypothesis of reproductive isolation and cryptic speciation in Atlantic cod. Further work is required to test the degree and nature of reproductive isolation in this species.

  2. Transcriptome profiling of the antiviral immune response in Atlantic cod macrophages.

    Science.gov (United States)

    Eslamloo, Khalil; Xue, Xi; Booman, Marije; Smith, Nicole C; Rise, Matthew L

    2016-10-01

    A study was conducted to determine the transcriptome response of Atlantic cod (Gadus morhua) macrophages to the viral mimic, polyriboinosinic polyribocytidylic acid (pIC), using a 20K Atlantic cod microarray platform and qPCR. We identified 285 significantly up-regulated and 161 significantly down-regulated probes in cod macrophages 24 h after pIC stimulation. A subset of 26 microarray-identified transcripts was subjected to qPCR validation using samples treated with pIC or phosphate-buffered saline (control) over time (3, 6, 12, 24, 48 h), and 77% of them showed a significant response to pIC. The microarray and qPCR analyses in this study showed that pIC induced the expression of cod macrophage transcripts involved in RLR- and TLR-dependent pathogen recognition (e.g. tlr3, tlr7, mda5 and lgp2), as well as signal transducers (e.g. stat1 and nfkbia) and transcription activators (e.g. irf7 and irf10) in the MyD88-independent and dependent signalling pathways. Several immune effectors (e.g. isg15s, viperin, herc4, mip2 and ccl13) were significantly up-regulated in pIC-stimulated cod macrophages. The expression of some transcripts (e.g. irf7, irf10, viperin) was significantly up-regulated by pIC as early as 12 h. All pIC-induced transcripts had peak expression at either 24 h (e.g. tlr7, irf7, mip2) or 48 h (e.g. tlr3, lgp2, stat1). This study suggests possible roles of both vertebrate-conserved (e.g. tlr3 as an up-regulated gene) and fish-specific (tlr22g as a down-regulated gene) receptors in dsRNA recognition, and the importance of conserved and potentially fish-specific interferon stimulated genes in cod macrophages. PMID:27255218

  3. The effect of carbon dioxide on growth of juvenile Atlantic cod Gadus morhua L

    DEFF Research Database (Denmark)

    Moran, Damian; Støttrup, Josianne

    2011-01-01

    substantially reduced with increasing CO2 dosage. The size-specific growth trajectories of fish reared under the medium and high CO2 treatments were approximately 2.5 and 7.5 times lower (respectively) than that of fish in the low treatment. Size variance and mortality rate was not significantly different...... experiments using marine fish species. The test concentrations were recalculated from the reported carbonate chemistry conditions, and indicated that the CO2 concentration effect threshold may have been overestimated in two of these studies. Our study suggests that juvenile Atlantic cod are more susceptible...

  4. Horizontal transmission of nervous necrosis virus between turbot Scophthalmus maximus and Atlantic cod Gadus morhua using cohabitation challenge.

    Science.gov (United States)

    Korsnes, Kjetil; Karlsbakk, Egil; Nylund, Are; Nerland, Audun Helge

    2012-05-15

    Experimental horizontal transmission of nervous necrosis virus (NNV) originating from halibut Hippoglossus hippoglossus was studied through cohabitation of intraperitoneally (i.p.) injected fish with uninfected fish for 125 d. The experimental groups consisted of i.p. injected turbot Scophthalmus maximus or i.p. injected Atlantic salmon Salmo salar with turbot, salmon or Atlantic cod Gadus morhua cohabitants. The initial weights were cod 10 g, salmon 40 g and turbot 3 g. NNV was detected in brain, eye and spleen by real-time reverse transcriptase PCR (qRT-PCR) in cod cohabitated with i.p. injected turbot after 90 and 125 d, suggesting NNV infection was transmitted horizontally from the turbot to cod. NNV was not detected in salmon that were cohabitated with i.p. challenged turbot or salmon. This study shows that NNV strains belonging to the Barfin Flounder Nervous Necrosis Virus (BFNNV) clade may be transmitted from halibut to cod via water. Hence there is a potential risk of horizontal transmission of the virus from farmed halibut to farmed and wild cod. The lack of detection of NNV in cohabitant salmon suggests that this fish species is less susceptible than cod, or not susceptible, to horizontal NNV transmission. This result might be influenced by the size of salmon, viral load in i.p. injected cohabitants or insufficient duration of the experiment.

  5. Biomarker candidate discovery in Atlantic cod (Gadus morhua) continuously exposed to North Sea produced water from egg to fry

    DEFF Research Database (Denmark)

    Bohne-Kjersem, Anneli; Bache, Nicolai; Meier, Sonnich;

    2010-01-01

    In this study Atlantic cod (Gadus morhua) were exposed to different levels of North Sea produced water (PW) and 17beta-oestradiol (E(2)), a natural oestrogen, from egg to fry stage (90 days). By comparing changes in protein expression following E(2) exposure to changes induced by PW treatment, we...... changes that may be useful as biomarker candidates of produced water (PW) and oestradiol exposure in Atlantic cod fry. The biomarker candidates discovered in this study may, following validation, prove effective as diagnostic tools in monitoring exposure and effects of discharges from the petroleum...

  6. Development of a SNP resource and a genetic linkage map for Atlantic cod (Gadus morhua

    Directory of Open Access Journals (Sweden)

    Higgins Brent

    2010-03-01

    Full Text Available Abstract Background Atlantic cod (Gadus morhua is a species with increasing economic significance for the aquaculture industry. The genetic improvement of cod will play a critical role in achieving successful large-scale aquaculture. While many microsatellite markers have been developed in cod, the number of single nucleotide polymorphisms (SNPs is currently limited. Here we report the identification of SNPs from sequence data generated by a large-scale expressed sequence tag (EST program, focusing on fish originating from Canadian waters. Results A total of 97976 ESTs were assembled to generate 13448 contigs. We detected 4753 SNPs that met our selection criteria (depth of coverage ≥ 4 reads; minor allele frequency > 25%. 3072 SNPs were selected for testing. The percentage of successful assays was 75%, with 2291 SNPs amplifying correctly. Of these, 607 (26% SNPs were monomorphic for all populations tested. In total, 64 (4% of SNPs are likely to represent duplicated genes or highly similar members of gene families, rather than alternative alleles of the same gene, since they showed a high frequency of heterozygosity. The remaining polymorphic SNPs (1620 were categorised as validated SNPs. The mean minor allele frequency of the validated loci was 0.258 (± 0.141. Of the 1514 contigs from which validated SNPs were selected, 31% have a significant blast hit. For the SNPs predicted to occur in coding regions (141, we determined that 36% (51 are non-synonymous. Many loci (1033 SNPs; 64% are polymorphic in all populations tested. However a small number of SNPs (184 that are polymorphic in the Western Atlantic were monomorphic in fish tested from three European populations. A preliminary linkage map has been constructed with 23 major linkage groups and 924 mapped SNPs. Conclusions These SNPs represent powerful tools to accelerate the genetic improvement of cod aquaculture. They have been used to build a genetic linkage map that can be applied to

  7. Residency, site fidelity and habitat use of Atlantic cod (Gadus morhua) at an offshore wind farm using acoustic telemetry.

    Science.gov (United States)

    Reubens, Jan T; Pasotti, Francesca; Degraer, Steven; Vincx, Magda

    2013-09-01

    Because offshore wind energy development is fast growing in Europe it is important to investigate the changes in the marine environment and how these may influence local biodiversity and ecosystem functioning. One of the species affected by these ecosystem changes is Atlantic cod (Gadus morhua), a heavily exploited, commercially important fish species. In this research we investigated the residency, site fidelity and habitat use of Atlantic cod on a temporal scale at windmill artificial reefs in the Belgian part of the North Sea. Acoustic telemetry was used and the Vemco VR2W position system was deployed to quantify the movement behaviour. In total, 22 Atlantic cod were tagged and monitored for up to one year. Many fish were present near the artificial reefs during summer and autumn, and demonstrated strong residency and high individual detection rates. When present within the study area, Atlantic cod also showed distinct habitat selectivity. We identified aggregation near the artificial hard substrates of the wind turbines. In addition, a clear seasonal pattern in presence was observed. The high number of fish present in summer and autumn alternated with a period of very low densities during the winter period. PMID:23937893

  8. Learning from ‘apparent consensus’ in TAC disputes: Exploring knowledge overlaps in LEK and genetic categorization of Atlantic cod

    DEFF Research Database (Denmark)

    Hedeholm, R. B.; Jacobsen, R. B.; Eg Nielsen, Einar

    2016-01-01

    The rapid development of genetic science has improved the methods for fisheries stock assessments with increasing implications for management. One key accomplishment has been the identification of different sub-populations of Atlantic cod. Recognizing that local coastal fishers in the North Atlan...

  9. Electrical stunning of farmed Atlantic cod Gadus morhua L.: a comparison of an industrial and experimental method

    NARCIS (Netherlands)

    Digre, H.; Erikson, U.; Misimi, E.; Lambooij, E.; Vis, van de J.W.

    2010-01-01

    An industrial and experimental electrical method for stunning farmed Atlantic cod in air and seawater (SW), respectively, were compared. The impacts of sedation with AQUI-S™ and exercise to exhaustion before electrical stunning were also assessed to monitor the possible depletion of rested muscle en

  10. Impact of water-accommodated fractions of crude oil on Atlantic cod, Gadus morhua following chronic exposure

    International Nuclear Information System (INIS)

    This study examined the long-term effects of hydrocarbon exposure on the gonadal development of fish. Mature Atlantic cod (Gadus morhua) were exposed to low concentrations of water accommodated fractions (WAFs) of polycyclic aromatic hydrocarbons (PAHs) in an ambient flowthrough seawater system. Some PAH-exposed cod groups were depurated afterwards for 38 to 287 days. Mortality was rare, and external lesions occurred only in the PAH-exposed groups. The gonado-somatic index revealed that gonadal development was disrupted in both sexes and spawning and spermiation was delayed in the 33 depurated PAH-groups. The findings indicate that chronic exposure to WAFs in the water column may have an adverse effect on reproduction in Atlantic cod.

  11. Composition and structure of the parasite faunas of cod, Gadus morhua L. (Teleostei: Gadidae, in the North East Atlantic

    Directory of Open Access Journals (Sweden)

    Kostadinova Aneta

    2008-07-01

    Full Text Available Abstract Background Although numerous studies on parasites of the Atlantic cod, Gadus morhua L. have been conducted in the North Atlantic, comparative analyses on local cod parasite faunas are virtually lacking. The present study is based on examination of large samples of cod from six geographical areas of the North East Atlantic which yielded abundant baseline data on parasite distribution and abundance. Materials and Methods A total of 826 fish was sampled in the Baltic, Celtic, Irish and North seas, Icelandic waters and Trondheimsfjord (Norway in 2002 (spring and autumn and 2003 (spring. The gills and internal organs (oesophagus, stomach, intestine, pyloric caeca, liver, heart, spleen, gall bladder and gonads were examined for macroparasites following a standardised protocol. The taxonomic consistency of the identification was ensured thorough the entire study. Results We discuss some problems in parasite identification, outline the composition of the parasite faunas in cod in the six North East Atlantic regions, provide novel data on parasite prevalence and abundance and a comparative assessment of the structure of the regional parasite faunas with respect to the higher-level taxonomic groupings, host specificity and zoogeographical distribution of the parasites. Altogether 57 different parasite forms were found including seven new host records (Diclidophora merlangi, Rhipidocotyle sp., Fellodistomum sp., Steringotrema sp., Cucullanus sp., Spinitectus sp., and Chondracanthus ornatus. The predominant groups of cod parasites were trematodes (19 species and nematodes (13 species including larval anisakids which comprised 58.2% of the total number of individuals. Conclusion Our study reveals relatively rich regional parasite faunas in cod from the North East Atlantic which are dominated by generalist parasites with Arcto-Boreal distribution. Further, it provides more detailed data on the distribution in the North East Atlantic of the majority

  12. Prey exoskeletons influence the course of gastric evacuation in Atlantic cod Gadus morhua

    DEFF Research Database (Denmark)

    Couturier, C. S.; Andersen, N. G.; Audet, C.;

    2013-01-01

    This study examined the effects of prey exoskeleton characteristics on gastric evacuation patterns in Atlantic cod Gadus morhua. Three distinct stages were highlighted in the gastric evacuation of crustacean prey characterized by a robust exoskeleton. The experiments confirmed that the three shrimp...... of the prey exoskeleton all affected gastric evacuation: duration of initial delay, overall evacuation rate and a decreased evacuation rate at the end of the process. The power exponential function (PEF), with its shape parameter, described the course of evacuation for these prey types well, especially...... the initial delay. The PEF does not, however, allow describing evacuation by the current stomach content mass independent of meal size, which limits its usefulness in estimating consumption rates of wild G. morhua. To predict and describe gastric evacuation of prey with a robust exoskeleton, it is therefore...

  13. Chitosan as an edible invisible film for quality preservation of herring and atlantic cod.

    Science.gov (United States)

    Jeon, You-Jin; Kamil, Janak Y V A; Shahidi, Fereidoon

    2002-08-28

    The effect of chitosan with different molecular weights as coatings for shelf-life extension of fresh fillets of Atlantic cod (Gadus morhua) and herring (Clupea harengus) was evaluated over a 12-day storage at refrigerated temperature (4 +/- 1 degrees C). Three chitosan preparations from snow crab (Chinoecetes opilio) processing wastes, differing in viscosities and molecular weights, were prepared; their apparent viscosities (360, 57, and 14 cP) depended on the deacetylation time (4, 10, and 20 h, respectively) of the chitin precursor. Upon coating with chitosans, a significant (p chitosan after 4, 6, 8, 10, and 12 days of storage, respectively. Chitosan coating significantly (p chitosan were inter-related; the efficacy of chitosans with viscosities of 57 and 360 cP was superior to that of chitosan with a 14 cP viscosity. Thus, chitosan as edible coating would enhance the quality of seafoods during storage.

  14. Climate warming causes life-history evolution in a model for Atlantic cod (Gadus morhua)

    Science.gov (United States)

    Holt, Rebecca E.; Jørgensen, Christian

    2014-01-01

    Climate change influences the marine environment, with ocean warming being the foremost driving factor governing changes in the physiology and ecology of fish. At the individual level, increasing temperature influences bioenergetics and numerous physiological and life-history processes, which have consequences for the population level and beyond. We provide a state-dependent energy allocation model that predicts temperature-induced adaptations for life histories and behaviour for the North-East Arctic stock (NEA) of Atlantic cod (Gadus morhua) in response to climate warming. The key constraint is temperature-dependent respiratory physiology, and the model includes a number of trade-offs that reflect key physiological and ecological processes. Dynamic programming is used to find an evolutionarily optimal strategy of foraging and energy allocation that maximizes expected lifetime reproductive output given constraints from physiology and ecology. The optimal strategy is then simulated in a population, where survival, foraging behaviour, growth, maturation and reproduction emerge. Using current forcing, the model reproduces patterns of growth, size-at-age, maturation, gonad production and natural mortality for NEA cod. The predicted climate responses are positive for this stock; under a 2°C warming, the model predicted increased growth rates and a larger asymptotic size. Maturation age was unaffected, but gonad weight was predicted to more than double. Predictions for a wider range of temperatures, from 2 to 7°C, show that temperature responses were gradual; fish were predicted to grow faster and increase reproductive investment at higher temperatures. An emergent pattern of higher risk acceptance and increased foraging behaviour was also predicted. Our results provide important insight into the effects of climate warming on NEA cod by revealing the underlying mechanisms and drivers of change. We show how temperature-induced adaptations of behaviour and several life

  15. Ocean Acidification Effects on Atlantic Cod Larval Survival and Recruitment to the Fished Population

    Science.gov (United States)

    Stiasny, Martina H.; Mittermayer, Felix H.; Sswat, Michael; Voss, Rüdiger; Jutfelt, Fredrik; Chierici, Melissa; Puvanendran, Velmurugu; Mortensen, Atle; Reusch, Thorsten B. H.; Clemmesen, Catriona

    2016-01-01

    How fisheries will be impacted by climate change is far from understood. While some fish populations may be able to escape global warming via range shifts, they cannot escape ocean acidification (OA), an inevitable consequence of the dissolution of anthropogenic carbon dioxide (CO2) emissions in marine waters. How ocean acidification affects population dynamics of commercially important fish species is critical for adapting management practices of exploited fish populations. Ocean acidification has been shown to impair fish larvae’s sensory abilities, affect the morphology of otoliths, cause tissue damage and cause behavioural changes. Here, we obtain first experimental mortality estimates for Atlantic cod larvae under OA and incorporate these effects into recruitment models. End-of-century levels of ocean acidification (~1100 μatm according to the IPCC RCP 8.5) resulted in a doubling of daily mortality rates compared to present-day CO2 concentrations during the first 25 days post hatching (dph), a critical phase for population recruitment. These results were consistent under different feeding regimes, stocking densities and in two cod populations (Western Baltic and Barents Sea stock). When mortality data were included into Ricker-type stock-recruitment models, recruitment was reduced to an average of 8 and 24% of current recruitment for the two populations, respectively. Our results highlight the importance of including vulnerable early life stages when addressing effects of climate change on fish stocks. PMID:27551924

  16. Ocean Acidification Effects on Atlantic Cod Larval Survival and Recruitment to the Fished Population.

    Science.gov (United States)

    Stiasny, Martina H; Mittermayer, Felix H; Sswat, Michael; Voss, Rüdiger; Jutfelt, Fredrik; Chierici, Melissa; Puvanendran, Velmurugu; Mortensen, Atle; Reusch, Thorsten B H; Clemmesen, Catriona

    2016-01-01

    How fisheries will be impacted by climate change is far from understood. While some fish populations may be able to escape global warming via range shifts, they cannot escape ocean acidification (OA), an inevitable consequence of the dissolution of anthropogenic carbon dioxide (CO2) emissions in marine waters. How ocean acidification affects population dynamics of commercially important fish species is critical for adapting management practices of exploited fish populations. Ocean acidification has been shown to impair fish larvae's sensory abilities, affect the morphology of otoliths, cause tissue damage and cause behavioural changes. Here, we obtain first experimental mortality estimates for Atlantic cod larvae under OA and incorporate these effects into recruitment models. End-of-century levels of ocean acidification (~1100 μatm according to the IPCC RCP 8.5) resulted in a doubling of daily mortality rates compared to present-day CO2 concentrations during the first 25 days post hatching (dph), a critical phase for population recruitment. These results were consistent under different feeding regimes, stocking densities and in two cod populations (Western Baltic and Barents Sea stock). When mortality data were included into Ricker-type stock-recruitment models, recruitment was reduced to an average of 8 and 24% of current recruitment for the two populations, respectively. Our results highlight the importance of including vulnerable early life stages when addressing effects of climate change on fish stocks. PMID:27551924

  17. Ocean Acidification Effects on Atlantic Cod Larval Survival and Recruitment to the Fished Population.

    Science.gov (United States)

    Stiasny, Martina H; Mittermayer, Felix H; Sswat, Michael; Voss, Rüdiger; Jutfelt, Fredrik; Chierici, Melissa; Puvanendran, Velmurugu; Mortensen, Atle; Reusch, Thorsten B H; Clemmesen, Catriona

    2016-01-01

    How fisheries will be impacted by climate change is far from understood. While some fish populations may be able to escape global warming via range shifts, they cannot escape ocean acidification (OA), an inevitable consequence of the dissolution of anthropogenic carbon dioxide (CO2) emissions in marine waters. How ocean acidification affects population dynamics of commercially important fish species is critical for adapting management practices of exploited fish populations. Ocean acidification has been shown to impair fish larvae's sensory abilities, affect the morphology of otoliths, cause tissue damage and cause behavioural changes. Here, we obtain first experimental mortality estimates for Atlantic cod larvae under OA and incorporate these effects into recruitment models. End-of-century levels of ocean acidification (~1100 μatm according to the IPCC RCP 8.5) resulted in a doubling of daily mortality rates compared to present-day CO2 concentrations during the first 25 days post hatching (dph), a critical phase for population recruitment. These results were consistent under different feeding regimes, stocking densities and in two cod populations (Western Baltic and Barents Sea stock). When mortality data were included into Ricker-type stock-recruitment models, recruitment was reduced to an average of 8 and 24% of current recruitment for the two populations, respectively. Our results highlight the importance of including vulnerable early life stages when addressing effects of climate change on fish stocks.

  18. Harvest selection on Atlantic cod behavioral traits: implications for spatial management.

    Science.gov (United States)

    Olsen, Esben Moland; Heupel, Michelle R; Simpfendorfer, Colin A; Moland, Even

    2012-07-01

    Harvesting wild populations may contrast or reinforce natural agents of selection and potentially cause evolutionary changes in life-history traits such as growth and maturation. Harvest selection may also act on behavioral traits, although this field of research has so far received less attention. We used acoustic tags and a network of receivers to monitor the behavior and fate of individual Atlantic cod (Gadus morhua, N = 60) in their natural habitat on the Norwegian Skagerrak coast. Fish with a strong diel vertical migration, alternating between shallow- and deep-water habitats, had a higher risk of being captured in the fishery (traps, gillnet, hand line) as compared to fish that stayed in deeper water. There was also a significant negative correlation between fish size (30-66 cm) and the magnitude of diel vertical migration. Natural selection on behavior was less clear, but tended to favor fish with a large activity space. On a monthly time scale we found significant repeatabilities for cod behavior, meaning that individual characteristics tended to persist and therefore may be termed personality traits. We argue that an evolutionary approach to fisheries management should consider fish behavior. This would be of particular relevance for spatial management actions such as marine reserve design.

  19. Effect of produced water on feeding and metabolism of Atlantic cod (Gadus morhua)

    Energy Technology Data Exchange (ETDEWEB)

    Volkoff, H.; Parrish, C. [Memorial Univ. of Newfoundland, St. John' s, NL (Canada); Hamoutene, D.; Mabrouk, G.; Samuelson, S.; Mansour, A.; Lee, K. [Fisheries and Oceans Canada, Dartmouth, NS (Canada). Maritimes Region, Ocean Sciences Division

    2007-07-01

    This paper addressed concerns regarding potentially detrimental cumulative effects of waste products from oil industry activities on marine organisms around production sites. The metabolic capacities, feeding and digestive physiology of fish have been shown to change with environmental parameters, which could impact the growth and health status of fish populations. In this study, the effects of produced water (PW) on feeding and metabolism of Atlantic cod was investigated by exposing fish to 0.100 ppm (x 10,000 PW dilution) or 200 ppm (x 500 dilution) of PW for 76 days. Throughout the experiment, food intake and mean weight were monitored. In addition, serum lipids, metabolites and gene expression of a brain appetite regulating factor were measured at the end of the experiment. No significant differences were observed in weight gain or food intake between the 3 groups of fish. Serum metabolites and neuropeptide Y expression remained unchanged between groups. The study is ongoing to complete comparative measurements of whole blood fatty acid profiles in plasma. The preliminary results indicate that feeding and metabolism in cod is not affected by produced water.

  20. Effect of moderate hypoxia at three acclimation temperatures on stress responses in Atlantic cod with different haemoglobin types

    DEFF Research Database (Denmark)

    Methling, Caroline; Aluru, Neelakanteswar; Vijayan, Mathilakath M;

    2010-01-01

    geographical distribution pattern, and differences in preferred temperature of cod with different haemoglobin types, the study was extended to include haemoglobin polymorphism. We hypothesised that the differences in temperature preference between HbI-1 and HbI-2 type cod might also be reflected in a...... difference in stress response to hypoxia exposure. Two hsp70-isoforms (labelled a and b) were detected and they differed in expression in the gills but not in the liver of Atlantic cod. Acclimation temperature significantly affected the expression of hsp70 in the liver, and in an isoform-specific manner in...... the gills. Hypoxia exposure increased the expression of hsp70 in the liver, but not the gills, of cod and this response was not influenced by the acclimation temperature. The expression of hsp70 in both tissues did not differ between fish with different haemoglobin types. Acclimation temperature...

  1. First feed affects the expressions of microRNA and their targets in Atlantic cod.

    Science.gov (United States)

    Bizuayehu, Teshome Tilahun; Furmanek, Tomasz; Karlsen, Ørjan; van der Meeren, Terje; Edvardsen, Rolf Brudvik; Rønnestad, Ivar; Hamre, Kristin; Johansen, Steinar D; Babiak, Igor

    2016-04-14

    To our knowledge, there is no report on microRNA (miRNA) expression and their target analysis in relation to the type of the first feed and its effect on the further growth of fish. Atlantic cod (Gadus morhua) larvae have better growth and development performance when fed natural zooplankton as a start-feed, as compared with those fed typical aquaculture start-feeds. In our experiment, two groups of Atlantic cod larvae were fed reference feed (zooplankton, mostly copepods, filtered from a seawater pond) v. aquaculture feeds: enriched rotifers (Brachionus sp.) and later brine shrimp (Artemia salina). We examined the miRNA expressions of six defined developmental stages as determined and standardised by body length from first feeding for both diet groups. We found eight miRNA (miR-9, miR-19a, miR-130b, miR-146, miR-181a, miR-192, miR-206 and miR-11240) differentially expressed between the two feeding groups in at least one developmental stage. We verified the next-generation sequencing data using real-time RT-PCR. We found 397 putative targets (mRNA) to the differentially expressed miRNA; eighteen of these mRNA showed differential expression in at least one stage. The patterns of differentially expressed miRNA and their putative target mRNA were mostly inverse, but sometimes also concurrent. The predicted miRNA targets were involved in different pathways, including metabolic, phototransduction and signalling pathways. The results of this study provide new nutrigenomic information on the potential role of miRNA in mediating nutritional effects on growth during the start-feeding period in fish larvae. PMID:26857476

  2. Rested and stressed farmed Atlantic cod (Gadus morhua) chilled in ice or slurry and effects on quality.

    Science.gov (United States)

    Digre, Hanne; Erikson, Ulf; Aursand, Ida G; Gallart-Jornet, Lorena; Misimi, Ekrem; Rustad, Turid

    2011-01-01

    The main objectives of this study were to investigate (1) whether rested harvest of farmed cod was better maintained by chilling with slurry rather than by traditional ice storage, (2) whether chilling with slurry would be a feasible chilling method to assure low core temperatures (≤0 °C) at packing of gutted fish, and (3) the effects of superchilling compared with traditional ice on selected quality parameters of cod during storage. In the experiment, seawater slurry at -2.0 ± 0.3 °C was used. Anesthetized (AQUI-S™), percussion stunned, and stressed cod chilled in slurry were compared. Cod stored on ice were used as reference group. The fish were evaluated at the day of slaughter, and after 7 and 14 d of storage according to handling stress (initial muscle pH, muscle twitches, rigor mortis), core temperatures, quality index method, microbial counts, weight changes, salt and water content, water distribution, pH, adenosine triphosphate-degradation products, K-value, water-holding capacity, fillet color, and texture. Chilling cod in slurry was more rapid than chilling in ice. Prechilling (1 d) of cod in slurry before subsequent ice storage resulted in lower quality 7 d postmortem compared with both ice and continuous slurry storage. The potential advantages of superchilling became more prominent after 14 d with lower microbiological activity, better maintenance of freshness (lower total quality index scores and lower K-values) compared with fish stored on ice. A drawback with slurry-stored fish was that cloudy eyes developed earlier, in addition to weight gain and salt uptake compared to ice-stored fish. Practical Application: Chilling is an essential operation in any fish-processing plant. This manuscript addresses different applications of slurry ice in the processing and storage of Atlantic cod. Cod quality was assessed after 7 and 14 d of iced and superchilled storage. PMID:21535722

  3. Effects of chronic produced water exposure on the expression of some immune-related genes of juvenile Atlantic cod

    International Nuclear Information System (INIS)

    This study assessed the impacts of exposure to processed water produced by offshore oil operators on immune-related genes of juvenile Atlantic cod exposed to processed water for a period of 22 weeks. The study investigated the influence of processed water concentrations on growth parameters; food consumption; plasma cortisol; respiratory burst activity (RB); and mRNA expression. The study showed that the RB of circulating leukocytes was significantly elevated. Significant up-regulation of the mRNA expression of microglobulin, immunoglobulin light chain, and interleukins was observed in some fish. The down-regulation of the interferon stimulated gene was also observed. The study indicated that chronic exposure to significant amounts of processed water causes modulations of the immune system of juvenile Atlantic cod.

  4. Experimental Challenge of Atlantic Cod (Gadus morhua) with a Brucella pinnipedialis Strain from Hooded Seal (Cystophora cristata).

    Science.gov (United States)

    Nymo, Ingebjørg Helena; Seppola, Marit; Al Dahouk, Sascha; Bakkemo, Kathrine Ryvold; Jiménez de Bagüés, María Pilar; Godfroid, Jacques; Larsen, Anett Kristin

    2016-01-01

    Pathology has not been observed in true seals infected with Brucella pinnipedialis. A lack of intracellular survival and multiplication of B. pinnipedialis in hooded seal (Cystophora cristata) macrophages in vitro indicates a lack of chronic infection in hooded seals. Both epidemiology and bacteriological patterns in the hooded seal point to a transient infection of environmental origin, possibly through the food chain. To analyse the potential role of fish in the transmission of B. pinnipedialis, Atlantic cod (Gadus morhua) were injected intraperitoneally with 7.5 x 107 bacteria of a hooded seal field isolate. Samples of blood, liver, spleen, muscle, heart, head kidney, female gonads and feces were collected on days 1, 7, 14 and 28 post infection to assess the bacterial load, and to determine the expression of immune genes and the specific antibody response. Challenged fish showed an extended period of bacteremia through day 14 and viable bacteria were observed in all organs sampled, except muscle, until day 28. Neither gross lesions nor mortality were recorded. Anti-Brucella antibodies were detected from day 14 onwards and the expression of hepcidin, cathelicidin, interleukin (IL)-1β, IL-10, and interferon (IFN)-γ genes were significantly increased in spleen at day 1 and 28. Primary mononuclear cells isolated from head kidneys of Atlantic cod were exposed to B. pinnipedialis reference (NCTC 12890) and hooded seal (17a-1) strain. Both bacterial strains invaded mononuclear cells and survived intracellularly without any major reduction in bacterial counts for at least 48 hours. Our study shows that the B. pinnipedialis strain isolated from hooded seal survives in Atlantic cod, and suggests that Atlantic cod could play a role in the transmission of B. pinnipedialis to hooded seals in the wild. PMID:27415626

  5. Chronic CO2 exposure markedly increases the incidence of cataracts in juvenile Atlantic cod Gadus morhua L

    DEFF Research Database (Denmark)

    Moran, Damian; Tubbs, Lincoln; Støttrup, Josianne G.

    2012-01-01

    A study was undertaken to test the affect of chronic exposure to elevated dissolved carbon dioxide on juvenile Atlantic cod. The CO2 treatment concentrations were designated as low (1–2mgL−1, 1000μatm), medium (8mgL−1, 3500μatm) and high (18mgL−1, 8500μatm), and the fish were reared at 10°C and 2...

  6. The effect of temperature and body size on metabolic scope of activity in juvenile Atlantic cod Gadus morhua L

    DEFF Research Database (Denmark)

    Tirsgaard, Bjørn; Behrens, Jane; Steffensen, John Fleng

    2015-01-01

    ), maximum metabolic rate (MMR, mg O2 h−1) and metabolic scope (MS, mg O2 h−1) of juvenile Atlantic cod. SMR increased with BM irrespectively of temperature, resulting in an average scaling exponent of 0.87 (0.82–0.92). Q10 values were 1.8–2.1 at temperatures between 5 and 15 °C but higher (2.6–4.3) between...

  7. Experimental Challenge of Atlantic Cod (Gadus morhua) with a Brucella pinnipedialis Strain from Hooded Seal (Cystophora cristata)

    Science.gov (United States)

    Nymo, Ingebjørg Helena; Seppola, Marit; Al Dahouk, Sascha; Bakkemo, Kathrine Ryvold; Jiménez de Bagüés, María Pilar; Godfroid, Jacques; Larsen, Anett Kristin

    2016-01-01

    Pathology has not been observed in true seals infected with Brucella pinnipedialis. A lack of intracellular survival and multiplication of B. pinnipedialis in hooded seal (Cystophora cristata) macrophages in vitro indicates a lack of chronic infection in hooded seals. Both epidemiology and bacteriological patterns in the hooded seal point to a transient infection of environmental origin, possibly through the food chain. To analyse the potential role of fish in the transmission of B. pinnipedialis, Atlantic cod (Gadus morhua) were injected intraperitoneally with 7.5 x 107 bacteria of a hooded seal field isolate. Samples of blood, liver, spleen, muscle, heart, head kidney, female gonads and feces were collected on days 1, 7, 14 and 28 post infection to assess the bacterial load, and to determine the expression of immune genes and the specific antibody response. Challenged fish showed an extended period of bacteremia through day 14 and viable bacteria were observed in all organs sampled, except muscle, until day 28. Neither gross lesions nor mortality were recorded. Anti-Brucella antibodies were detected from day 14 onwards and the expression of hepcidin, cathelicidin, interleukin (IL)-1β, IL-10, and interferon (IFN)-γ genes were significantly increased in spleen at day 1 and 28. Primary mononuclear cells isolated from head kidneys of Atlantic cod were exposed to B. pinnipedialis reference (NCTC 12890) and hooded seal (17a-1) strain. Both bacterial strains invaded mononuclear cells and survived intracellularly without any major reduction in bacterial counts for at least 48 hours. Our study shows that the B. pinnipedialis strain isolated from hooded seal survives in Atlantic cod, and suggests that Atlantic cod could play a role in the transmission of B. pinnipedialis to hooded seals in the wild. PMID:27415626

  8. Slaughter Methods and Processing of Farmed Atlantic Cod ( Gadus morhua ): welfare aspects and flesh quality

    OpenAIRE

    Digre, Hanne

    2011-01-01

    Atlantic cod is an important species for food production in Norway, and over the last couples of decades; Atlantic cod farming has gradually evolved as an industry in Norway. The harvesting procedures of farmed fish have gained major attention both in the aquaculture industry, research institutions and various organizations dealing with animal welfare issues. According to the legislations, the fish must be stunned before or at the same time as they are killed and remain unconscious until deat...

  9. Zschokkella hildae Auerbach, 1910: phylogenetic position, morphology, and location in cultured Atlantic cod.

    Science.gov (United States)

    Holzer, Astrid Sibylle; Wootten, Rod; Sommerville, Christina

    2010-06-01

    The myxozoan Zschokkella hildae Auerbach, 1910, was detected with a prevalence of 100% in cultured Atlantic cod, Gadus morhua L. aged 1+ from a culture facility on the west coast of Scotland. Sporogonic stages of Z. hildae, plasmodia producing 2-5 mature spores, were located predominantly in the collecting ducts and ureters of the kidney, and spores were present in the urine collected from the bladder. Less frequently, plasmodia were detected in the interstitial tissue of the kidney. The parasite prevalence in cultured fish was considerably higher than reported in wild fish but no obvious signs of pathology were detected. SSU rDNA sequencing and phylogenetic analysis showed that Z. hildae is closely related to a Sinuolinea sp. from the urinary system of turbot, Psetta maxima (L.), and that these two species, together with other myxozoans from the urinary system of marine fish cluster together in a sub-clade of the recognised marine clade of myxozoans. This sub-clade is characterised by a specific linear expansion segment, helix E23_15 in the secondary structure of variable region V4 of the SSU rDNA. Z. hildae and Sinuolinea sp. show extraordinary large linear expansion segment in both V4 and V7 and an important number of complementary base changes in the conservative regions of the SSU rDNA, indicating considerable evolutionary changes in the SSU rDNA of these species when compared with other myxozoans from the marine environment.

  10. North Atlantic ecosystem shifts revealed by cod otolith δ15N and δ13C chronologies

    DEFF Research Database (Denmark)

    Pedersen, Jens Brøgger; Nielsen, Jens Munk; Steingrund, Petur;

    Changes in climate and exploitation have caused large fluctuations in the productivity of many North Atlantic cod populations and the collapse of many cod fisheries. These fluctuations are most likely due to a combined effect of physical processes and changes in ecosystem trophic structure. To...... study the link between environmental changes and ecosystem trophic structure we developed δ15N and δ13C chronologies by analyzing the organic matrix of cod otoliths from the Faroe Shelf cod population (1950-2010) and the Nuuk Fjord cod population (1927-2009). Significant correlations between δ15N & δ13C...... annual mean values over time were seen in both ecosystems, suggesting δ15N & δ13C values were affected by the same overall processes. There were significant effects of climate variables (temperature, Atlantic Multi-decadal Oscillation (AMO) and Sub Polar Gyre index) on δ15N and δ13C chronologies in both...

  11. Photoperiod-modulated testis maturation in Atlantic cod (Gadus morhua, L.).

    Science.gov (United States)

    Almeida, Fernanda F L; Taranger, Geir Lasse; Norberg, Birgitta; Karlsen, Orjan; Bogerd, Jan; Schulz, Rüdiger W

    2009-04-01

    Precocious male puberty is a significant problem in Atlantic cod aquaculture. While photoperiod manipulation can inhibit testis growth, a detailed analysis of effects on spermatogenesis is missing. Starting July 1, 2004, prepubertal fish were exposed to different photoperiod regimens in indoor tanks for 17 mo. Testis histology, germ cell dynamics (proliferation and apoptosis), and plasma androgen levels were analyzed. In the natural light (NL) group, testis growth started in September 2004 and was completed in February 2005, when a 2-mo spawning period started. In the constant light (LL) group, none or very few spermatogenic cysts were recruited into spermatogenesis, and apoptotic germ cell loss was high. A change of photoperiod from NL to LL at winter solstice (December 21, 2004) resulted in premature (2 mo) completion of the reproductive cycle, while changing from LL to NL at winter solstice triggered faster than normal testis development. Plasma testosterone levels increased in the NL group from spermatogonial proliferation toward meiosis, while those of 11-ketotestosterone increased toward spermiogenesis and spermiation. Plasma androgen levels did not rise under LL conditions. Comparing fish with developing testes from all groups indicated that low androgen levels were associated with a high incidence of spermatogonial apoptosis; we also found that androgen receptor mRNA expression was most prominent in Sertoli cells in contact with growing spermatogonial clones. Our data show that an inhibitory photoperiod (LL) reduced or blocked differentiation of spermatogonia, increased apoptosis (particularly among proliferating spermatogonia), and was associated with reduced androgen levels, a situation possibly reflecting insufficient gonadotropic stimulation. PMID:19038862

  12. Temperature Modulates the Effects of Ocean Acidification on Intestinal Ion Transport in Atlantic Cod, Gadus morhua

    Science.gov (United States)

    Hu, Marian Y.; Michael, Katharina; Kreiss, Cornelia M.; Stumpp, Meike; Dupont, Sam; Tseng, Yung-Che; Lucassen, Magnus

    2016-01-01

    CO2-driven seawater acidification has been demonstrated to enhance intestinal bicarbonate secretion rates in teleosts, leading to an increased release of CaCO3 under simulated ocean acidification scenarios. In this study, we investigated if increasing CO2 levels stimulate the intestinal acid–base regulatory machinery of Atlantic cod (Gadus morhua) and whether temperatures at the upper limit of thermal tolerance stimulate or counteract ion regulatory capacities. Juvenile G. morhua were acclimated for 4 weeks to three CO2 levels (550, 1200, and 2200 μatm) covering present and near-future natural variability, at optimum (10°C) and summer maximum temperature (18°C), respectively. Immunohistochemical analyses revealed the subcellular localization of ion transporters, including Na+/K+-ATPase (NKA), Na+/H+-exchanger 3 (NHE3), Na+/HCO3− cotransporter (NBC1), pendrin-like Cl−/HCO3− exchanger (SLC26a6), V-type H+-ATPase subunit a (VHA), and Cl− channel 3 (CLC3) in epithelial cells of the anterior intestine. At 10°C, proteins and mRNA were generally up-regulated for most transporters in the intestinal epithelium after acclimation to higher CO2 levels. This supports recent findings demonstrating increased intestinal HCO3− secretion rates in response to CO2 induced seawater acidification. At 18°C, mRNA expression and protein concentrations of most ion transporters remained unchanged or were even decreased, suggesting thermal compensation. This response may be energetically favorable to retain blood HCO3− levels to stabilize pHe, but may negatively affect intestinal salt and water resorption of marine teleosts in future oceans. PMID:27313538

  13. Impact of dietary selenium on methylmercury toxicity in juvenile Atlantic cod: a transcriptional survey.

    Science.gov (United States)

    Olsvik, Pål A; Amlund, Heidi; Sæle, Øystein; Ellingsen, Ståle; Skjaerven, Kaja H

    2015-02-01

    Selenium (Se) and its derivatives are known to have protective effects against mercury (Hg) toxicity in mammals. In this study we wanted to evaluate whether Se co-exposure affect the transcription of methylmercury (MeHg) toxicity-relevant genes in early life stages of fish. Juvenile Atlantic cod were exposed to regular feed (control), Se-spiked feed (3mg Se kg(-1)), MeHg-spiked feed (10mg Hg kg(-1)) or to Se- and MeHg-spiked feed (3mg Se kg(-1) and 10mg Hg kg(-1), respectively) for ten weeks. Liver tissue was harvested for transcriptional analysis when the fish were weighing 11.4 ± 3.2g. Accumulated levels of Hg in liver of the two groups of fish exposed to MeHg were 1.5mg Hg kg(-1) wet weight, or 44-fold higher than in the control group, while the Se concentrations differed with less than 2-fold between the fish groups. Selenium co-exposure had no effect on the accumulated levels of Hg in liver tissue; however, MeHg co-exposure reduced the accumulated level of Se. Dietary exposure to MeHg had no effect on fish growth. Interaction effects between Se and MeHg exposure were observed for the transcriptional levels of CAT, GPX1, GPX3, NFE2L2, UBA52, SEPP1 and DNMT1. Significant effects of MeHg exposure were seen for DNMT1 and PPARG, while effects of Se exposure were seen for GPX4B and SEPP1A, as well as for DNA methyltransferase activity. The transcriptional results suggest, by considering up-regulation as a proxy for negative impact and at the tested concentrations, a pro-oxidative effect of Se co-exposure with MeHg, rather than an antioxidative effect. PMID:25062025

  14. Temperature modulates the effects of ocean acidification on intestinal ion transport in Atlantic cod, Gadus morhua

    Directory of Open Access Journals (Sweden)

    Marian Yong-An Hu

    2016-06-01

    Full Text Available CO2-driven seawater acidification has been demonstrated to enhance intestinal bicarbonate secretion rates in teleosts, leading to an increased release of CaCO3 under simulated ocean acidification scenarios. In this study, we investigated if increasing CO2 levels stimulate the intestinal acid–base regulatory machinery of Atlantic cod (Gadus morhua and whether temperatures at the upper limit of thermal tolerance stimulate or counteract ion regulatory capacities. Juvenile G. morhua were acclimated for four weeks to three CO2 levels (550, 1,200 and 2,200 μatm covering present and near-future natural variability, at optimum (10°C and summer maximum temperature (18°C, respectively. Immunohistochemical analyses revealed the subcellular localization of ion transporters, including Na+/K+-ATPase (NKA, Na+/H+-exchanger 3 (NHE3, Na+/HCO3- cotransporter (NBC1, pendrin-like Cl-/HCO3- exchanger (SLC26a6, V-type H+-ATPase subunit a (VHA and Cl- channel 3 (CLC3 in epithelial cells of the anterior intestine. At 10°C, proteins and mRNA were generally up-regulated for most transporters in the intestinal epithelium after acclimation to higher CO2 levels. This supports recent findings demonstrating increased intestinal HCO3- secretion rates in response to CO2 induced seawater acidification. At 18°C, mRNA expression and protein concentrations of most ion transporters remained unchanged or were even decreased, suggesting thermal compensation. This response may be energetically favorable to retain blood HCO3- levels to stabilize pHe, but may negatively affect intestinal salt and water resorption of marine teleosts in future oceans.

  15. Aerobic scope for activity in age 0 year Atlantic cod Gadus morhua.

    Science.gov (United States)

    Hansen, S L; von Herbing, I Hunt

    2009-05-01

    Key components of swimming metabolism: standard metabolism (R(s)), active metabolism (R(a)) and absolute aerobic scope for activity (R(a)-R(s)) were determined for small age 0 year Atlantic cod Gadus morhua. Gadus morhua juveniles grew from 0.50 to 2.89 g wet body mass (M(WB)) over the experimental period of 100 days, and growth rates (G) ranged from 1.4 to 2.9% day(-1), which decreased with increasing size. Metabolic rates were recorded by measuring changes in oxygen consumption over time at different activity levels using modified Brett-type respirometers designed to accommodate the small size and short swimming endurance of small fishes. Power performance relationships were established between oxygen consumption and swimming speed measurements were repeated for individual fish as each fish grew. Mass-specific standard metabolic rates (RsMWB-1) were calculated from the power performance relationships by extrapolating to zero swimming speed and decreased from 7.00 to 5.77 micromol O(2) g(-1) h(-1), mass-specific active metabolic rates (RaMWB-1) were calculated from extrapolation to maximum swimming speed (U(max)) and decreased from 26.18 to 14.35 micromol O(2) g(-1) h(-1) and mass-specific absolute scope for activity was calculated as the difference between active and standard metabolism (RaMWB-1-RsMWB-1) and decreased from 26.18 to 14.35 micromol O(2) g(-1) h(-1) as M(WB) increased. Small fish with low R(s) had bigger aerobic scopes but, as expected, R(s) was higher in smaller fish than larger fish. The measurements and results from this study are unique as R(s), R(a) and absolute aerobic scopes have not been previously determined for small age 0 year G. morhua.

  16. Genotype by Environment Interaction for Growth in Atlantic Cod (Gadus morhua L. in Four Farms of Norway

    Directory of Open Access Journals (Sweden)

    Rama Bangera

    2015-06-01

    Full Text Available We studied genotype by environment interaction (G × E for body weight (BW of Atlantic cod (Gadus morhua L. from the National cod breeding program in Norway. Records of 13,811 fish in a nucleus farm (NUC and two test farms (PENorth, PESouth in year-class (YC 2007, and for 9149 fish in NUC and one test farm in YC 2010 were available. Heterogeneity of variances and heritabilities ( were estimated using a univariate animal model with environmental effects common to full-sibs (full-model. Genetic correlations ( between farms were estimated using a multivariate full-model and a reduced-model (without for each YC. Heterogeneity of  was observed in both YC 2007 (0.10 to 0.16 and YC 2010 (0.08 to 0.26. The estimates of  between NUC and test farms were relatively high for both models (0.81 ± 0.19 to 0.96 ± 0.17 and (0.81 ± 0.08 to 0.86 ± 0.04, suggesting low re-ranking of genotypes. Strong re-ranking of genotypes between PESouth and PENorth may be less important because most cod producers are situated close to the breeding nucleus. In conclusion, G × E between NUC and test farms were low and at present there is no need for separate breeding programs for BW in cod.

  17. Caseins from bovine colostrum and milk strongly bind piscidin-1, an antimicrobial peptide from fish.

    Science.gov (United States)

    Kütt, Mary-Liis; Stagsted, Jan

    2014-09-01

    A model system of bovine colostrum and piscidin, a fish-derived antimicrobial peptide, was developed to study potential interactions of antimicrobial peptides in colostrum. We did not detect any antimicrobial activity of colostrum using the radial plate diffusion assay; in fact colostrum completely abrogated activity of added piscidin. This could not be explained by degradation of piscidin by colostrum, which was less than ten percent. We found that colostrum even protected piscidin against degradation by added proteases. We further observed that colostrum and milk rapidly quenched the fluorescence of fluorescein-piscidin but not that of fluorescein. This effect was not seen with BSA and the specific quenching of fluorescein-piscidin by colostrum was saturably inhibited with unlabeled piscidin. Size exclusion chromatography indicated that fluorescein-piscidin bound to casein micelles with no apparent binding to IgG or whey proteins. Further, addition of pure caseins was able to quench fluorescence of fluorescein-piscidin and to inhibit the antimicrobial activity of piscidin. The interaction between caseins and piscidin could be dissociated by guanidine hydrochloride and recovered piscidin had antimicrobial activity against bacteria. Based on our results we propose that caseins could be carriers for antimicrobial peptides in colostrum and milk. PMID:25036607

  18. Historical DNA reveals the demographic history of Atlantic cod (Gadus morhua) in medieval and early modern Iceland.

    Science.gov (United States)

    Ólafsdóttir, Guðbjörg Ásta; Westfall, Kristen M; Edvardsson, Ragnar; Pálsson, Snæbjörn

    2014-02-22

    Atlantic cod (Gadus morhua) vertebrae from archaeological sites were used to study the history of the Icelandic Atlantic cod population in the time period of 1500-1990. Specifically, we used coalescence modelling to estimate population size and fluctuations from the sequence diversity at the cytochrome b (cytb) and Pantophysin I (PanI) loci. The models are consistent with an expanding population during the warm medieval period, large historical effective population size (NE), a marked bottleneck event at 1400-1500 and a decrease in NE in early modern times. The model results are corroborated by the reduction of haplotype and nucleotide variation over time and pairwise population distance as a significant portion of nucleotide variation partitioned across the 1550 time mark. The mean age of the historical fished stock is high in medieval times with a truncation in age in early modern times. The population size crash coincides with a period of known cooling in the North Atlantic, and we conclude that the collapse may be related to climate or climate-induced ecosystem change.

  19. An estrogen-responsive plasma protein expression signature in Atlantic cod (Gadus morhua) revealed by SELDI-TOF MS

    DEFF Research Database (Denmark)

    Nielsen, Mari Mæland; Meyer, Sonnich; Larsen, Bodil Katrine;

    2011-01-01

    Compound-specific protein expression signatures( PESs) can be revealed by proteomic techniques. The SELDI-TOF MS approach is advantageous due to its simplicity and high-throughput capacity,however, there are concerns regarding the reproducibility of this method. The aim of this study was to define...... an estrogen-responsive PES in plasma of Atlantic cod (Gadus morhua) using the SELDI-TOF MS technique. Protein expression analysis of male cod exposed to 17 b-estradiol (E2) showed that 27 plasma peaks were differentially expressed following exposure.There producibility of this result was evaluated....... A targeted antibody-assisted SELDI-TOF MS approach was carried out in an attempt to identify the E2-responsive peaks. Results indicated that 2 peaks were fragments of the well-known biomarkers VTG and/or ZRP. In this study, the SELDI-TOF MS technology has shown its potential for defining compound...

  20. Distribution and drift of Atlantic cod ( Gadus morhua ) eggs and larvae in Greenland offshore waters

    DEFF Research Database (Denmark)

    Wieland, Kai; Hovgård, Holger

    2002-01-01

    recruitment of the West Greenland cod stock. It is also shown that cod eggs and larvae occasionally drift from Southwest Iceland across the Denmark Strait to the East Greenland shelf from where a subsequent transport and immigration of juveniles to West Greenland waters can occur. Larval transport across the...

  1. Microevolution in time and space: SNP analysis of historical DNA reveals dynamic signatures of selection in Atlantic cod

    DEFF Research Database (Denmark)

    Therkildsen, Nina Overgaard; Hansen, Jakob Hemmer; Als, Thomas Damm;

    2013-01-01

    of Atlantic cod (Gadus morhua) studied over an 80-year period. Screening of >1000 gene-associated single-nucleotide polymorphisms (SNPs) identified 77 loci that showed highly elevated levels of differentiation, likely as an effect of directional selection, in either time, space or both. Exploratory analysis...... the 1928 to 1960 period showed almost complete stability during later decades. The contrasting microevolutionary trajectories among populations resulted in sequential shifts in spatial outliers, with no locus maintaining elevated spatial differentiation throughout the study period. Simulations of migration...

  2. Effects of reproduction on growth and survival in Atlantic cod, Gadus morhua, assessed by comparison to triploids

    DEFF Research Database (Denmark)

    Trippel, Edward A.; Butts, Ian; Babin, Amanda;

    2014-01-01

    in captive iteroparous, batch-spawning Atlantic cod (Gadus morhua), utilizing diploids and triploids, knowing that triploid females invest little to no energy into gametogenesis. Based on annual specific growth rate, there was no evidence for a somatic cost of reproduction at ages 2 (virgin year) and 4....... years, but there was at age 3. years. At age 2. years, low investment in reproduction likely accounted for the lack of a somatic cost of reproduction, whereas at age 4 the absence was associated with heightened growth post-spawning enabling mature fish to catch up to immature fish. At age 3...

  3. Sex differentiation in Atlantic cod (Gadus morhua L.: morphological and gene expression studies

    Directory of Open Access Journals (Sweden)

    Haugen Trine

    2012-06-01

    Full Text Available Abstract Background In differentiated gonochoristic species, a bipotential gonad develops into an ovary or testis during sex differentiation. Knowledge about this process is necessary to improve methods for masculinizing genetically female Atlantic cod for the subsequent purpose of producing all-female populations. Methods Gonads were examined histologically in juveniles from 14 to 39 mm total body length (TL. Number and size of germ cells were determined in a subset of the samples. Relevant genes were cloned, and mRNA levels determined by qPCR of amh, cyp19a1a; dax1 (nr0b2; shp (nr0b2a and sox9b in a mixed-sex and an all-female population ranging from 12–49 mm TL. Results Individuals between 14–20 mm TL could be separated in two subgroups based on gonad size and germ cell number. Ovarian cavity formation was observed in some individuals from 18–20 mm TL. The mixed sex population displayed bimodal expression patterns as regards cyp19a1a (starting at 12 mm TL and amh (starting at 20 mm TL mRNA levels. After approximately 30 mm TL, cyp19a1a and amh displayed a gradual increase in both sexes. No apparent, sex-dependent expression patterns were found for dax1, shp or sox9b transcripts. However, shp levels were high until the larvae reached around 35 mm TL and then dropped to low levels, while dax1 remained low until 35 mm TL, and then increased sharply. Conclusions The morphological sex differentiation in females commenced between 14–20 mm TL, and ovarian cavities were evident by 18–20 mm TL. Testis development occurred later, and was morphologically evident after 30 mm TL. This pattern was corroborated with sexually dimorphic expression patterns of cyp19a1a from 12–13 mm TL, and a male-specific increase in amh from 20 mm TL.

  4. Copepods enhance nutritional status, growth and development in Atlantic cod (Gadus morhua L.) larvae – can we identify the underlying factors?

    OpenAIRE

    Ørjan Karlsen; Terje van der Meeren; Ivar Rønnestad; Anders Mangor-Jensen; Galloway, Trina F.; Elin Kjørsvik; Kristin Hamre

    2015-01-01

    The current commercial production protocols for Atlantic cod depend on enriched rotifers and Artemia during first-feeding, but development and growth remain inferior to fish fed natural zooplankton. Two experiments were conducted in order to identify the underlying factors for this phenomenon. In the first experiment (Exp-1), groups of cod larvae were fed either (a) natural zooplankton, mainly copepods, increasing the size of prey as the larvae grew or (b) enriched rotifers followed by Artemi...

  5. Nucleotide variation and balancing selection at the Ckma gene in Atlantic cod: analysis with multiple merger coalescent models

    Directory of Open Access Journals (Sweden)

    Einar Árnason

    2015-02-01

    Full Text Available High-fecundity organisms, such as Atlantic cod, can withstand substantial natural selection and the entailing genetic load of replacing alleles at a number of loci due to their excess reproductive capacity. High-fecundity organisms may reproduce by sweepstakes leading to highly skewed heavy-tailed offspring distribution. Under such reproduction the Kingman coalescent of binary mergers breaks down and models of multiple merger coalescent are more appropriate. Here we study nucleotide variation at the Ckma (Creatine Kinase Muscle type A gene in Atlantic cod. The gene shows extreme differentiation between the North (Canada, Greenland, Iceland, Norway, Barents Sea and the South (Faroe Islands, North-, Baltic-, Celtic-, and Irish Seas with FST > 0.8 between regions whereas neutral loci show no differentiation. This is evidence of natural selection. The protein sequence is conserved by purifying selection whereas silent and non-coding sites show extreme differentiation. The unfolded site-frequency spectrum has three modes, a mode at singleton sites and two high frequency modes at opposite frequencies representing divergent branches of the gene genealogy that is evidence for balancing selection. Analysis with multiple-merger coalescent models can account for the high frequency of singleton sites and indicate reproductive sweepstakes. Coalescent time scales vary with population size and with the inverse of variance in offspring number. Parameter estimates using multiple-merger coalescent models show that times scales are faster than under the Kingman coalescent.

  6. The responses of Atlantic cod (Gadus morhua L.) to ultrasound-emitting predators: stress, behavioural changes or debilitation?

    DEFF Research Database (Denmark)

    Schack, H.B.; Malte, H.; Madsen, Peter Teglberg

    2008-01-01

    A previous study has reported that Atlantic cod can be conditioned to detect ultrasonic sound pulses of high intensity. This capability has been proposed as a mean for detection and avoidance of echolocating toothed whales that emit intense ultrasonic clicks. In this study, we use acoustic...... playbacks to test the hypotheses that unconditioned cod can detect and respond to intense ultrasound from toothed whales and from echosounders. Intense ultrasound exposure of 210 dB re. 1µPa (pp) did not cause a short-term stress response in the form of bradycardia in unconditioned cod. Free-swimming cod...... exposed to ultrasonic clicks and echosounder pulses with received levels of more than 204 dB re. 1 µPa (pp) did not elicit flight responses as seen in ultrasound detecting Alosinae. Furthermore, we tested the debilitating effects of high intensity ultrasound on swimming cod with no detected changes in...

  7. Hierarchical modelling of temperature and habitat size effects on population dynamics of North Atlantic cod

    DEFF Research Database (Denmark)

    Mantzouni, Irene; Sorensen, H.; O'Hara, R.B.;

    2010-01-01

    and Beverton and Holt stock - recruitment (SR) models were extended by applying hierarchical methods, mixed-effects models, and Bayesian inference to incorporate the influence of these ecosystem factors on model parameters representing cod maximum reproductive rate and carrying capacity. We identified...

  8. Temperature, paternity and asynchronous hatching influence early developmental characteristics of larval Atlantic cod, Gadus morhua

    DEFF Research Database (Denmark)

    Politis, Sebastian Nikitas; Dahlke, Flemming T.; Butts, Ian A.E.;

    2014-01-01

    or if they hatched at the end of the hatching period at a specific temperature. Differences in larval morphometrics among temperatures for early hatching larvae decreased or even reversed for later hatching larvae. In light of anticipated global climate change, the present study on cod provides further insight...

  9. Amino acid sequence of the cold-active alkaline phosphatase from Atlantic cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Asgeirsson, Bjarni; Nielsen, Berit Noesgaard; Højrup, Peter

    2003-01-01

    -linked glycosylation sites were found. The glycan structure was determined as complex biantennary in type with fucose and sialic acid attached, although a trace of complex tri-antennary structure was also observed. A three-dimensional model was obtained by homology modelling using the human placental AP scaffold. Cod...

  10. Influences of potential predictor variables on gastric evacuation in Atlantic cod Gadus morhua L. feeding on fish prey

    DEFF Research Database (Denmark)

    Andersen, Niels Gerner

    2012-01-01

    The parameter values of a generic model of gastric evacuation were estimated from evacuation data on Atlantic cod Gadus morhua fed meals of four fish prey: herring Clupea harengus, sprat Sprattus sprattus, lesser sandeel Ammodytes tobianus and dab Limanda limanda. The effects on evacuation...... of photoperiod and pre-experimental treatment of prey were also tested. Freshly killed A. tobianus were evacuated from the stomach of G. morhua at a rate similar to the value estimated from conspecifics kept deep-frozen and subsequently thawed prior to the evacuation experiment. The evacuation rate in G. morhua...... exposed to continuous light did not differ from the rate obtained from fish maintained under a 12L:12D photoperiod. The evacuation rates estimated from the latter fish in the dark and light periods, respectively, were likewise similar. These results indicate that the resistance of prey to the digestive...

  11. The influence of feeding behaviour on growth of Atlantic cod (Gadus morhua, Linnaeus, 1758) in the North Sea

    DEFF Research Database (Denmark)

    Hüssy, Karin; Andersen, Niels Gerner; Pedersen, Eva Maria

    2016-01-01

    The objective of this study was to resolve key mechanisms driving individual growth patterns of Atlantic cod (Gadus morhua). Growth dynamics were analysed by linking growth patterns with stomach content composition and environmental temperature. Samples were collected in August/September of the...... years 2009, 2010 and 2011 in the north-eastern part of the central North Sea. Prey selection was assessed by identification of individual prey items in the stomach content to species. Ten feeding groups were identified consisting of individuals with one prey type dominating their stomach contents (≥75...... opportunistic in their prey selection, but at the same time indicated that the total, broad feeding niche width of the population is dominated by individual diet specialization and that many individuals temporally show a preference for a particular prey type. The contribution of invertebrates and particularly...

  12. An investigation of appetite-related peptide transcript expression in Atlantic cod (Gadus morhua) brain following a Camelina sativa meal-supplemented feeding trial.

    Science.gov (United States)

    Tuziak, Sarah M; Rise, Matthew L; Volkoff, Hélène

    2014-10-25

    Camelina sativa is a hardy oilseed crop with seeds that contain high levels of ω3 polyunsaturated fatty acids and protein, which are critical components of fish feed. Camelina might thus be used as a cheaper and more sustainable supplement to fish-based products in aquaculture. Atlantic cod, Gadus morhua, is a species of interest in the aquaculture industry due to a decrease in wild populations and subsequent collapse of some cod fisheries. As cod are carnivorous fish, it is necessary to determine how this species physiologically tolerates plant-based diets. In this study, juvenile Atlantic cod were subjected to 13 weeks of either 15 or 30% camelina meal (CM)-supplemented diets or a control fish meal feed. Growth and food intake were evaluated and the mRNA expression of appetite-related hormones [pro-melanin-concentrating hormone (pmch), hypocretin (synonym: orexin, hcrt), neuropeptide Y (npy) and cocaine- and amphetamine-regulated transcript (cart)] was assessed using quantitative real-time PCR in brain regions related to food intake regulation (telencephalon/preoptic area, optic tectum/thalamus and hypothalamus). CM inclusion diets caused decreases in both growth and food intake in Atlantic cod. Optic tectum pmch transcript expression was significantly higher in fish fed the 30% CM diet compared to fish fed the 15% CM diet. In the hypothalamus, compared to fish fed the control diet, hcrt expression was significantly higher in fish fed the 30% CM diet, while npy transcript expression was significantly higher in fish fed the 15% CM diet. cart mRNA expression was not affected by diet in any brain region. Further studies are needed to determine which factors (e.g. anti-nutritional factors, palatability and nutritional deficits) contribute to reduced feed intake and growth, as well as the maximum CM inclusion level that does not negatively influence feed intake, growth rate and the transcript expression of appetite-related factors in Atlantic cod. PMID:25151310

  13. An investigation of appetite-related peptide transcript expression in Atlantic cod (Gadus morhua) brain following a Camelina sativa meal-supplemented feeding trial.

    Science.gov (United States)

    Tuziak, Sarah M; Rise, Matthew L; Volkoff, Hélène

    2014-10-25

    Camelina sativa is a hardy oilseed crop with seeds that contain high levels of ω3 polyunsaturated fatty acids and protein, which are critical components of fish feed. Camelina might thus be used as a cheaper and more sustainable supplement to fish-based products in aquaculture. Atlantic cod, Gadus morhua, is a species of interest in the aquaculture industry due to a decrease in wild populations and subsequent collapse of some cod fisheries. As cod are carnivorous fish, it is necessary to determine how this species physiologically tolerates plant-based diets. In this study, juvenile Atlantic cod were subjected to 13 weeks of either 15 or 30% camelina meal (CM)-supplemented diets or a control fish meal feed. Growth and food intake were evaluated and the mRNA expression of appetite-related hormones [pro-melanin-concentrating hormone (pmch), hypocretin (synonym: orexin, hcrt), neuropeptide Y (npy) and cocaine- and amphetamine-regulated transcript (cart)] was assessed using quantitative real-time PCR in brain regions related to food intake regulation (telencephalon/preoptic area, optic tectum/thalamus and hypothalamus). CM inclusion diets caused decreases in both growth and food intake in Atlantic cod. Optic tectum pmch transcript expression was significantly higher in fish fed the 30% CM diet compared to fish fed the 15% CM diet. In the hypothalamus, compared to fish fed the control diet, hcrt expression was significantly higher in fish fed the 30% CM diet, while npy transcript expression was significantly higher in fish fed the 15% CM diet. cart mRNA expression was not affected by diet in any brain region. Further studies are needed to determine which factors (e.g. anti-nutritional factors, palatability and nutritional deficits) contribute to reduced feed intake and growth, as well as the maximum CM inclusion level that does not negatively influence feed intake, growth rate and the transcript expression of appetite-related factors in Atlantic cod.

  14. Effects of hypoxic exposure during feeding on SDA and postprandial cardiovascular physiology in the Atlantic cod, Gadus morhua.

    Science.gov (United States)

    Behrens, Jane W; Axelsson, Michael; Neuenfeldt, Stefan; Seth, Henrik

    2012-01-01

    Some Atlantic cod in the Bornholm Basin undertake vertical foraging migrations into severely hypoxic bottom water. Hypoxic conditions can reduce the postprandial increase in gastrointestinal blood flow (GBF). This could subsequently postpone or reduce the postprandial increase in oxygen consumption (MO(2)), i.e. the SDA, leading to a disturbed digestion. Additionally, a restricted oxygen uptake could result in an oxygen debt that needs to be compensated for upon return to normoxic waters and this may also affect the ability to process the food. Long-term cardio-respiratory measurements were made on fed G. morhua in order to understand how the cardio-respiratory system of feeding fish respond to a period of hypoxia and a subsequent return to normoxia. These were exposed to 35% water oxygen saturation for 90 minutes, equivalent to the time and oxygen level cod voluntarily endure when searching for food in the Bornholm Basin. We found that i) gastric and intestinal blood flows, cardiac output and MO(2) increased after feeding, ii) gastric and intestinal blood flows were spared in hypoxia, and iii) there were no indications of an oxygen debt at the end of the hypoxic period. The magnitude and time course of the measured variables are similar to values obtained from fish not exposed to the hypoxic period. In conclusion, when cod in the field search for and ingest prey under moderate hypoxic conditions they appear to stay within safe limits of oxygen availability as we saw no indications of an oxygen debt, or negative influence on digestive capacity, when simulating field observations.

  15. Effects of hypoxic exposure during feeding on SDA and postprandial cardiovascular physiology in the Atlantic cod, Gadus morhua.

    Directory of Open Access Journals (Sweden)

    Jane W Behrens

    Full Text Available Some Atlantic cod in the Bornholm Basin undertake vertical foraging migrations into severely hypoxic bottom water. Hypoxic conditions can reduce the postprandial increase in gastrointestinal blood flow (GBF. This could subsequently postpone or reduce the postprandial increase in oxygen consumption (MO(2, i.e. the SDA, leading to a disturbed digestion. Additionally, a restricted oxygen uptake could result in an oxygen debt that needs to be compensated for upon return to normoxic waters and this may also affect the ability to process the food. Long-term cardio-respiratory measurements were made on fed G. morhua in order to understand how the cardio-respiratory system of feeding fish respond to a period of hypoxia and a subsequent return to normoxia. These were exposed to 35% water oxygen saturation for 90 minutes, equivalent to the time and oxygen level cod voluntarily endure when searching for food in the Bornholm Basin. We found that i gastric and intestinal blood flows, cardiac output and MO(2 increased after feeding, ii gastric and intestinal blood flows were spared in hypoxia, and iii there were no indications of an oxygen debt at the end of the hypoxic period. The magnitude and time course of the measured variables are similar to values obtained from fish not exposed to the hypoxic period. In conclusion, when cod in the field search for and ingest prey under moderate hypoxic conditions they appear to stay within safe limits of oxygen availability as we saw no indications of an oxygen debt, or negative influence on digestive capacity, when simulating field observations.

  16. Copepods enhance nutritional status, growth and development in Atlantic cod (Gadus morhua L.) larvae - can we identify the underlying factors?

    Science.gov (United States)

    Karlsen, Ørjan; van der Meeren, Terje; Rønnestad, Ivar; Mangor-Jensen, Anders; Galloway, Trina F; Kjørsvik, Elin; Hamre, Kristin

    2015-01-01

    The current commercial production protocols for Atlantic cod depend on enriched rotifers and Artemia during first-feeding, but development and growth remain inferior to fish fed natural zooplankton. Two experiments were conducted in order to identify the underlying factors for this phenomenon. In the first experiment (Exp-1), groups of cod larvae were fed either (a) natural zooplankton, mainly copepods, increasing the size of prey as the larvae grew or (b) enriched rotifers followed by Artemia (the intensive group). In the second experiment (Exp-2), two groups of larvae were fed as in Exp-1, while a third group was fed copepod nauplii (approximately the size of rotifers) throughout the larval stage. In both experiments, growth was not significantly different between the groups during the first three weeks after hatching, but from the last part of the rotifer feeding period and onwards, the growth of the larvae fed copepods was higher than that of the intensive group. In Exp-2, the growth was similar between the two copepod groups during the expeimental period, indicating that nutrient composition, not prey size caused the better growth on copepods. Analyses of the prey showed that total fatty acid composition and the ratio of phospholipids to total lipids was slightly different in the prey organisms, and that protein, taurine, astaxanthin and zinc were lower on a dry weight basis in rotifers than in copepods. Other measured nutrients as DHA, all analysed vitamins, manganese, copper and selenium were similar or higher in the rotifers. When compared to the present knowledge on nutrient requirements, protein and taurine appeared to be the most likely limiting nutrients for growth in cod larvae fed rotifers and Artemia. Larvae fed rotifers/Artemia had a higher whole body lipid content than larvae fed copepods at the end of the experiment (stage 5) after the fish had been fed the same formulated diet for approximately 2 weeks. PMID:26038712

  17. Infection dynamics of two renal myxozoans in hatchery reared fry and juvenile Atlantic cod Gadus morhua L.

    Science.gov (United States)

    Holzer, A S; Stewart, S; Tildesley, A; Wootten, R; Sommerville, C

    2010-09-01

    In order to study the infection dynamics of 2 renal myxozoans, Zschokkella hildae Auerbach, 1910 and Gadimyxa atlantica Køie, Karlsbakk and Nylund, 2007 in cultured Atlantic cod, Gadus morhua L. aged 3-19 months, a specific single-round PCR assay and a double-label in situ hybridization protocol were developed. The results demonstrated that the 2 myxozoans show spatial separation of their development with regard to spore formation inside the renal tubules versus the collecting ducts and ureters, as well as temporal separation with Z. hildae proliferating and developing spores only once the G. atlantica infection decreases, despite the presence of both myxozoans in the smallest fry studied. These results strongly suggest within-host competition of the 2 myxozoans with potential suppression of Z. hildae by G. atlantica until G. morhua acquires immunity against G. atlantica. The quantification of the G. atlantica infection inside the renal tubules before and after a 29-day experimental growth performance study using fry from hatcheries with differing filtration systems showed that the intensity of infection with G. atlantica seems to be controlled if prolonged exposure to the myxozoan transmission stages takes place from hatching onwards. Surprisingly, growth rates in the trial were inversely affected suggesting that G. atlantica does not negatively influence cod fry growth performance.

  18. Single and mixture effects of aquatic micropollutants studied in precision-cut liver slices of Atlantic cod (Gadus morhua).

    Science.gov (United States)

    Bizarro, Cristina; Eide, Marta; Hitchcock, Daniel J; Goksøyr, Anders; Ortiz-Zarragoitia, Maren

    2016-08-01

    The low concentrations of most contaminants in the aquatic environment individually may not affect the normal function of the organisms on their own. However, when combined, complex mixtures may provoke unexpected effects even at low amounts. Selected aquatic micropollutants such as chlorpyrifos, bis-(2-ethylhexyl)-phthalate (DEHP), perfluorooctanoic acid (PFOA) and 17α-ethinylestradiol (EE2) were tested singly and in mixtures at nM to μM concentrations using precision-cut liver slices (PCLS) of Atlantic cod (Gadus morhua). Fish liver is a target organ for contaminants due to its crucial role in detoxification processes. In order to understand the effects on distinct key liver metabolic pathways, transcription levels of various genes were measured, including cyp1a1 and cyp3a, involved in the metabolism of organic compounds, including toxic ones, and the catabolism of bile acids and steroid hormones; cyp7a1, fabp and hmg-CoA, involved in lipid and cholesterol homeostasis; cyp24a1, involved in vitamin D metabolism; and vtg, a key gene in xenoestrogenic response. Only EE2 had significant effects on gene expression in cod liver slices when exposed singly at the concentrations tested. However, when exposed in combinations, effects not detected in single exposure conditions arose, suggesting complex interactions between studied pollutants that could not be predicted from the results of individual exposure scenarios. Thus, the present work highlights the importance of assessing mixtures when describing the toxic effects of micropollutants to fish liver metabolism. PMID:27388235

  19. Melanin-concentrating hormone (MCH) and gonadotropin-releasing hormones (GnRH) in Atlantic cod, Gadus morhua: tissue distributions, early ontogeny and effects of fasting.

    Science.gov (United States)

    Tuziak, Sarah M; Volkoff, Hélène

    2013-12-01

    Melanin-concentrating hormone (MCH) is classically known for its role in regulating teleost fish skin color change for environmental adaptation. Recent evidence suggests that MCH also has appetite-stimulating properties. The gonadotropin-releasing hormone (GnRH) peptide family has dual roles in endocrine control of reproduction and energy status in fish. Atlantic cod (Gadus morhua) are a commercially important aquaculture species inhabiting the shores of Atlantic Canada. In this study, we examine MCH and GnRH transcript expression profiles during early development as well as in central and peripheral tissues and quantify juvenile Atlantic cod MCH and GnRH hypothalamic mRNA expressions following food deprivation. MCH and GnRH3 cDNAs are maternally deposited into cod eggs, while MCH has variable expression throughout early development. GnRH2 and GnRH3 mRNAs "turn-on" during mid-segmentation once the brain is fully developed. For both MCH and GnRH, highest expression appears during the exogenous feeding stages, perhaps supporting their functions as appetite regulators during early development. MCH and GnRH transcripts are found in brain regions related to appetite regulation (telencephalon/preoptic area, optic tectum/thalamus, hypothalamus), as well as the pituitary gland and the stomach, suggesting a peripheral function in food intake regulation. Atlantic cod MCH mRNA is upregulated during fasting, while GnRH2 and GnRH3 transcripts do not appear to be influenced by food deprivation. In conclusion, MCH might be involved in stimulating food intake in juvenile Atlantic cod, while GnRHs may play a more significant role in appetite regulation during early development.

  20. Linking size and age at sexual maturation to body growth, productivity and recruitment of Atlantic cod stocks spanning the North Atlantic

    DEFF Research Database (Denmark)

    Köster, Fritz; Trippel, E.A.; Tomkiewicz, Jonna

    2013-01-01

    Sexual maturation patterns of 22 North Atlantic stocks of cod (Gadus morhua) were examined and related to geographical distribution area, ambient water temperature, growth and surplus production. Four patterns were identified, i.e. sexual maturation early in life at small size, early in life...... at large size, late in life at small size and lastly, late in life at large size. These maturation patterns were geographically clustered and associated with differences in growth and surplus production. Stocks maturing late in life at small size were characterised by slow growth and low surplus production...... (e.g. stocks in the Gulf of St. Lawrence, Labrador/Newfoundland). Stocks maturing early in life at large size exhibited high to intermediate growth and surplus production (e.g. Celtic Sea, North Sea). Stocks maturing late in life at large size had low to intermediate growth rates and surplus...

  1. A moderate increase in ambient temperature modulates the Atlantic cod (Gadus morhua spleen transcriptome response to intraperitoneal viral mimic injection

    Directory of Open Access Journals (Sweden)

    Hori Tiago S

    2012-08-01

    Full Text Available Abstract Background Atlantic cod (Gadus morhua reared in sea-cages can experience large variations in temperature, and these have been shown to affect their immune function. We used the new 20K Atlantic cod microarray to investigate how a water temperature change which, simulates that seen in Newfoundland during the spring-summer (i.e. from 10°C to 16°C, 1°C increase every 5 days impacted the cod spleen transcriptome response to the intraperitoneal injection of a viral mimic (polyriboinosinic polyribocytidylic acid, pIC. Results The temperature regime alone did not cause any significant increases in plasma cortisol levels and only minor changes in spleen gene transcription. However, it had a considerable impact on the fish spleen transcriptome response to pIC [290 and 339 significantly differentially expressed genes between 16°C and 10°C at 6 and 24 hours post-injection (HPI, respectively]. Seventeen microarray-identified transcripts were selected for QPCR validation based on immune-relevant functional annotations. Fifteen of these transcripts (i.e. 88%, including DHX58, STAT1, IRF7, ISG15, RSAD2 and IκBα, were shown by QPCR to be significantly induced by pIC. Conclusions The temperature increase appeared to accelerate the spleen immune transcriptome response to pIC. We found 41 and 999 genes differentially expressed between fish injected with PBS vs. pIC at 10°C and sampled at 6HPI and 24HPI, respectively. In contrast, there were 656 and 246 genes differentially expressed between fish injected with PBS vs. pIC at 16°C and sampled at 6HPI and 24HPI, respectively. Our results indicate that the modulation of mRNA expression of genes belonging to the NF-κB and type I interferon signal transduction pathways may play a role in controlling temperature-induced changes in the spleen’s transcript expression response to pIC. Moreover, interferon effector genes such as ISG15 and RSAD2 were differentially expressed between fish injected with

  2. The hypoxia avoidance behaviour of juvenile Atlantic cod (Gadus morhua L.) depends on the provision and pressure level of an O2 refuge

    DEFF Research Database (Denmark)

    Herbert, Neill A.; Skjaeraasen, Jon E.; Nilsen, Trygve;

    2011-01-01

    morhua L.) were exposed to a range of O(2) choices in a 2-way choice chamber at 11.4 degrees C over two different experiments. Cod in the first experiment were allowed access to a fixed O(2) refuge (fully air-saturated seawater) whilst oxygen pressure (PO(2)) on the other side was reduced in steps......The frequency of low O(2) (hypoxia) has increased in coastal marine areas but how fish avoid deleterious water masses is not yet clear. To assess whether the presence and oxygen pressure (PO(2)) level of an O(2) refuge affects the hypoxia avoidance behaviour of fish, individual Atlantic cod (Gadus...

  3. Spatiotemporal distribution and composition of mixed stock fishery of Atlantic cod (Gadus morhua) in West Greenlandic waters based on retrospective genetic analysis

    DEFF Research Database (Denmark)

    Bonanomi, Sara; Therkildsen, Nina Overgaard; Hedeholm, Rasmus Berg;

    Historical samples of fish are a unique source of DNA to investigate the temporal dynamics of fish population structure and distribution over time. During the last century Atlantic cod (Gadus morhua) stocks have declined dramatically in Greenlandic Waters. Recent genetic investigations have...... in the contribution from the different spawning groups in population mixtures of cod in West Greenland Waters in response to climate variability and fisheries. Performing genetic assignment test, we found stable genetic composition of feeding aggregations over decades in some areas, whereas shifts in composition were...

  4. Correlations between hemoglobin type and temperature preference of juvenile Atlantic cod Gadus morhua

    DEFF Research Database (Denmark)

    Behrens, Jane W.; Gräns, Albin; Therkildsen, Nina Overgaard;

    2012-01-01

    regimes. Despite this only one study has directly examined the temperature preference of the two homozygous types, HbI-1/1 and HbI-2/2, whereas the preference of the heterozygote (HbI-1/2) has never previously been addressed. By exposing fish to a 4–19 °C temperature gradient in an annular preference...... temperature (temperature span between 1st and 3rd quartile) was very similar between all 3 Hbl types with 3.2–3.5 °C. Considering the complexity of a trait like temperature preference, there are clearly many other factors besides HbI type that influence the thermal biology of cod, and therefore we also...... investigated possible associations between genotype and temperature preference for 12 variable candidate gene single nucleotide polymorphisms (SNPs) a priori expected to be related to growth and reproduction. There were, however, no significant correlations between temperature preference and any...

  5. Ocean warming and acidification modulate energy budget and gill ion regulatory mechanisms in Atlantic cod (Gadus morhua).

    Science.gov (United States)

    Kreiss, C M; Michael, K; Lucassen, M; Jutfelt, F; Motyka, R; Dupont, S; Pörtner, H-O

    2015-10-01

    Ocean warming and acidification are threatening marine ecosystems. In marine animals, acidification is thought to enhance ion regulatory costs and thereby baseline energy demand, while elevated temperature also increases baseline metabolic rate. Here we investigated standard metabolic rates (SMR) and plasma parameters of Atlantic cod (Gadus morhua) after 3-4 weeks of exposure to ambient and future PCO2 levels (550, 1200 and 2200 µatm) and at two temperatures (10, 18 °C). In vivo branchial ion regulatory costs were studied in isolated, perfused gill preparations. Animals reared at 18 °C responded to increasing CO2 by elevating SMR, in contrast to specimens at 10 °C. Isolated gills at 10 °C and elevated PCO2 (≥1200 µatm) displayed increased soft tissue mass, in parallel to increased gill oxygen demand, indicating an increased fraction of gill in whole animal energy budget. Altered gill size was not found at 18 °C, where a shift in the use of ion regulation mechanisms occurred towards enhanced Na(+)/H(+)-exchange and HCO3 (-) transport at high PCO2 (2200 µatm), paralleled by higher Na(+)/K(+)-ATPase activities. This shift did not affect total gill energy consumption leaving whole animal energy budget unaffected. Higher Na(+)/K(+)-ATPase activities in the warmth might have compensated for enhanced branchial permeability and led to reduced plasma Na(+) and/or Cl(-) concentrations and slightly lowered osmolalities seen at 18 °C and 550 or 2200 µatm PCO2 in vivo. Overall, the gill as a key ion regulation organ seems to be highly effective in supporting the resilience of cod to effects of ocean warming and acidification.

  6. Genomic signatures of local directional selection in a high gene flow marine organism; the Atlantic cod (Gadus morhua

    Directory of Open Access Journals (Sweden)

    Mittelholzer Christian

    2009-12-01

    Full Text Available Abstract Background Marine fishes have been shown to display low levels of genetic structuring and associated high levels of gene flow, suggesting shallow evolutionary trajectories and, possibly, limited or lacking adaptive divergence among local populations. We investigated variation in 98 gene-associated single nucleotide polymorphisms (SNPs for evidence of selection in local populations of Atlantic cod (Gadus morhua L. across the species distribution. Results Our global genome scan analysis identified eight outlier gene loci with very high statistical support, likely to be subject to directional selection in local demes, or closely linked to loci under selection. Likewise, on a regional south/north transect of central and eastern Atlantic populations, seven loci displayed strongly elevated levels of genetic differentiation. Selection patterns among populations appeared to be relatively widespread and complex, i.e. outlier loci were generally not only associated with one of a few divergent local populations. Even on a limited geographical scale between the proximate North Sea and Baltic Sea populations four loci displayed evidence of adaptive evolution. Temporal genome scan analysis applied to DNA from archived otoliths from a Faeroese population demonstrated stability of the intra-population variation over 24 years. An exploratory landscape genetic analysis was used to elucidate potential effects of the most likely environmental factors responsible for the signatures of local adaptation. We found that genetic variation at several of the outlier loci was better correlated with temperature and/or salinity conditions at spawning grounds at spawning time than with geographic distance per se. Conclusion These findings illustrate that adaptive population divergence may indeed be prevalent despite seemingly high levels of gene flow, as found in most marine fishes. Thus, results have important implications for our understanding of the interplay of

  7. Genomic organization and gene expression of the multiple globins in Atlantic cod: conservation of globin-flanking genes in chordates infers the origin of the vertebrate globin clusters

    OpenAIRE

    Jakobsen Kjetill S; Wilson Robert C; Nederbragt Alexander J; Wetten Ola F; Edvardsen Rolf B; Andersen Øivind

    2010-01-01

    Abstract Background The vertebrate globin genes encoding the α- and β-subunits of the tetrameric hemoglobins are clustered at two unlinked loci. The highly conserved linear order of the genes flanking the hemoglobins provides a strong anchor for inferring common ancestry of the globin clusters. In fish, the number of α-β-linked globin genes varies considerably between different sublineages and seems to be related to prevailing physico-chemical conditions. Draft sequences of the Atlantic cod g...

  8. The fate of Lernaeocera branchialis (L.) (Crustacea; Copepoda) in Atlantic cod, Gadus morhua L.

    Science.gov (United States)

    Baily, J E; Smith, J L; Wootten, R; Sommerville, C

    2011-02-01

    Lernaeocera branchialis, a copepod crustacean parasite of gadoids, represents a potential threat to both wild and farmed cod, Gadus morhua. The pathological changes associated with the early stages of experimental infection have previously been reported in detail, and this article describes the lesions associated with later chronic stages of experimental infection. Chronic infection is characterised by extravascular granuloma formation and proliferation of fibrovascular tissue around intact and fragmented, degenerate parasites within both the gill arch and cardiac region. The majority of parasite granulomas are located within connective tissues of the gill arch or pericardium; however, low numbers are present within the wall of large vessels. The intraluminal parasites and thrombi of early stage infection are largely absent in these later lesions. We propose that organisation and incorporation of the parasite thrombus into the vessel wall with subsequent granuloma formation and extrusion into the surrounding connective tissue leads to the elimination of the parasite from the vascular system. Thus, rather than being a negative consequence of infection thrombosis is protective, allowing the host to survive the substantial initial vascular insult.

  9. Evidence for synergism of the antimicrobial peptide piscidin 2 with antiparasitic and antioomycete drugs.

    Science.gov (United States)

    Zahran, E; Noga, E J

    2010-12-01

    Piscidins are potent, broad-spectrum, host-produced antimicrobial peptides (AMPs) that appear to constitute the most common AMP family in teleost fish. Here, we show that piscidin 2 has potent activity against the water mould Saprolegnia, one of the most important pathogens of freshwater fish. The minimum oomyceticidal concentration (MOC₁₀₀) of piscidin 2 against zoospores of three pathogenic isolates of Saprolegnia ranged from 12.5 to 25.0 μg mL⁻¹. This piscidin concentration is well within levels that have been estimated to be present in at least some fish (1-32.5 μg mL⁻¹). In the presence of either copper or malachite green, two drugs commonly used to treat water moulds, there was evidence for partial synergism (PSYN) with piscidin 2. There was also evidence for PSYN after exposure of the ciliate parasite Tetrahymena pyriformis to piscidin 2 plus copper. Our data provide further evidence that piscidins may be an important host defence against skin and gill pathogens and that the piscidin levels in host tissue might influence the success of drug treatments. PMID:21091726

  10. Investigation of fixed wavelength fluorescence results for biliary metabolites of polycyclic aromatic hydrocarbons formed in Atlantic cod (Gadus morhua).

    Science.gov (United States)

    Pampanin, Daniela M; Kemppainen, Eeva K; Skogland, Karianne; Jørgensen, Kåre B; Sydnes, Magne O

    2016-02-01

    Fixed wavelength fluorescence (FF) and synchronous fluorescence scanning (SFS) of fish bile are commonly used methods to analyze for exposure to polycyclic aromatic hydrocarbons (PAHs) from petrogenic and pyrogenic sources. A range of conjugated oxidation products from petrogenic PAHs are normally accumulated in the bile. Therefore their detection is important. In the present study, phenanthrene and naphthalene metabolites, formed in vivo in Atlantic cod (Gadus morhua), were used to study the response of these compounds in both FF and SFS analyses. The selected synthetic metabolites were (-)-(1R,2R)-1,2-dihydrophenanthrene-1,2-diol and (-)-(1R,2R)-1,2-dihydronaphthalene-1,2-diol. The study findings showed that the recommended excitation and emission wavelengths for FF analysis do not comprise the maximum emission wavelengths for these metabolites, providing an incorrect estimation of the PAH exposure. A method developed in our laboratory for the synthesis of (-)-(1R,2R)-1,2-dihydrophenanthrene-1,2-diol is also described. PMID:26492423

  11. Impacts of regular and random noise on the behaviour, growth and development of larval Atlantic cod (Gadus morhua).

    Science.gov (United States)

    Nedelec, Sophie L; Simpson, Stephen D; Morley, Erica L; Nedelec, Brendan; Radford, Andrew N

    2015-10-22

    Anthropogenic noise impacts behaviour and physiology in many species, but responses could change with repeat exposures. As repeat exposures can vary in regularity, identifying regimes with less impact is important for regulation. We use a 16-day split-brood experiment to compare effects of regular and random acoustic noise (playbacks of recordings of ships), relative to ambient-noise controls, on behaviour, growth and development of larval Atlantic cod (Gadus morhua). Short-term noise caused startle responses in newly hatched fish, irrespective of rearing noise. Two days of both regular and random noise regimes reduced growth, while regular noise led to faster yolk sac use. After 16 days, growth in all three sound treatments converged, although fish exposed to regular noise had lower body width-length ratios. Larvae with lower body width-length ratios were easier to catch in a predator-avoidance experiment. Our results demonstrate that the timing of acoustic disturbances can impact survival-related measures during development. Much current work focuses on sound levels, but future studies should consider the role of noise regularity and its importance for noise management and mitigation measures. PMID:26468248

  12. Fertilisation and hatching success of Atlantic cod (Gadus morhua) eggs when exposed to various concentrations of produced water

    International Nuclear Information System (INIS)

    This study investigated the fertilization and hatching success of Atlantic cod (Gadus morhua) eggs that were exposed to various dilutions of produced water from a natural gas production platform. A control group of eggs was fertilized in sea water without any produced water. Another set of eggs were fertilized in sea water with 4 different concentrations of produced water and held their respective concentrations for 24 hours to evaluate the success of the fertilization. Viable fertilized eggs were transferred to 96 well plates containing fresh sea water and incubated in the dark at approximately 6 degrees C until hatch. Eggs began hatching about 14 days after fertilization (DPF), peaked at about 17 DPF, then finished hatching by 21 DPF. Analysis of PAH content in the diluted produced water showed that at 0.32 percent, 1.08 percent and 3.6 percent concentrations, the fertilization success was greater than or equal to that of the control group. However, for the 12 percent concentration, there were no viable fertilized eggs present after the 24 hour period. Survivability of eggs during sea water incubation was similar for the 0 percent, 0.32 percent and 1.08 percent treatment groups, but egg mortality increased for the 3.60 percent concentration group, to about 61.5 percent mean cumulative mortality at 6 DPF, then remained constant. The mean hatching success for all dilutions was presented.

  13. Evidence of uptake, biotransformation and DNA binding of polyaromatic hydrocarbons in Atlantic cod and corkwing wrasse caught in the vicinity of an aluminium works.

    Science.gov (United States)

    Aas, E; Beyer, J; Jonsson, G; Reichert, W L; Andersen, O K

    2001-09-01

    Feral Atlantic cod (Gadus morhua) and corkwing wrasse (Symphodus melops) were investigated for polyaromatic hydrocarbon (PAH) contamination in the Karmsund strait, western Norway. This strait is highly contaminated with PAHs, and a main source is the chronic release of gas-scrubbing effluents from a local aluminium works. In both species, the level of biliary PAH metabolites and hepatic DNA adducts were higher in fish collected near the aluminium works. Interestingly, a significantly higher level of both biliary PAH metabolites and hepatic DNA adducts was found in corkwing wrasse as compared to cod, indicating a higher potential for genotoxic effects in this species. Hepatic cytochrome P4501A (CYP1A) in cod estimated by ethoxyresorufin-O-deethylase and an immunoassay technique (ELISA), seemed to be weakly induced at the contaminated sites. At the most contaminated site, skin ulcers and fin erosion were detected in about 70 and 45% of the cods, respectively. The data demonstrated that both cod and corkwing wrasse may be suitable target species for PAH pollution monitoring.

  14. Harvest Pressure on Coastal Atlantic Cod (Gadus morhua) from Recreational Fishing Relative to Commercial Fishing Assessed from Tag-Recovery Data.

    Science.gov (United States)

    Kleiven, Alf Ring; Fernandez-Chacon, Albert; Nordahl, Jan-Harald; Moland, Even; Espeland, Sigurd Heiberg; Knutsen, Halvor; Olsen, Esben Moland

    2016-01-01

    Marine recreational fishing is a popular outdoor activity. However, knowledge about the magnitude of recreational catches relative to commercial catches in coastal fisheries is generally sparse. Coastal Atlantic cod (Gadus morhua) is a target species for recreational fishers in the North Atlantic. In Norway, recreational fishers are allowed to use a variety of traps and nets as well as long-line and rod and line when fishing for cod. From 2005 to 2013, 9729 cod (mean size: 40 cm, range: 15-93 cm) were tagged and released in coastal Skagerrak, southeast Norway. Both high-reward (NOK 500) and low-reward tags (NOK 50) were used in this study. Because some harvested fish (even those posting high-reward tags) may go unreported by fishers, reporting rates were estimated from mark-recovery models that incorporate detection parameters in their structure, in addition to survival and mortality estimates. During 2005 to 2013, a total of 1707 tagged cod were recovered and reported by fishers. We estimate the overall annual survival to be 33% (SE 1.5). Recreational rod and line fishing were responsible for 33.7% (SE 2.4) of total mortality, followed by commercial fisheries (15.1% SE 0.8) and recreational fixed gear (6.8% SE 0.4). Natural mortality was 44.4% (SE 2.5) of total mortality. Our findings suggest that recreational fishing-rod and line fishing in particular-is responsible for a substantial part of fishing mortality exerted on coastal cod in southern Norway.

  15. Harvest Pressure on Coastal Atlantic Cod (Gadus morhua from Recreational Fishing Relative to Commercial Fishing Assessed from Tag-Recovery Data.

    Directory of Open Access Journals (Sweden)

    Alf Ring Kleiven

    Full Text Available Marine recreational fishing is a popular outdoor activity. However, knowledge about the magnitude of recreational catches relative to commercial catches in coastal fisheries is generally sparse. Coastal Atlantic cod (Gadus morhua is a target species for recreational fishers in the North Atlantic. In Norway, recreational fishers are allowed to use a variety of traps and nets as well as long-line and rod and line when fishing for cod. From 2005 to 2013, 9729 cod (mean size: 40 cm, range: 15-93 cm were tagged and released in coastal Skagerrak, southeast Norway. Both high-reward (NOK 500 and low-reward tags (NOK 50 were used in this study. Because some harvested fish (even those posting high-reward tags may go unreported by fishers, reporting rates were estimated from mark-recovery models that incorporate detection parameters in their structure, in addition to survival and mortality estimates. During 2005 to 2013, a total of 1707 tagged cod were recovered and reported by fishers. We estimate the overall annual survival to be 33% (SE 1.5. Recreational rod and line fishing were responsible for 33.7% (SE 2.4 of total mortality, followed by commercial fisheries (15.1% SE 0.8 and recreational fixed gear (6.8% SE 0.4. Natural mortality was 44.4% (SE 2.5 of total mortality. Our findings suggest that recreational fishing-rod and line fishing in particular-is responsible for a substantial part of fishing mortality exerted on coastal cod in southern Norway.

  16. Where does the cod come from? Panels of gene‐associated markers provide vastly improved origin assignment in Atlantic cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Eg Nielsen, Einar; Hansen, Jakob Hemmer; Taylor, Martin;

    2012-01-01

    Methods for determining the geographical origin of individual fish are in high demand for fighting illegal, unreported, and unregulated (IUU) fishing and for independent control of catch certificates and “eco‐labels”. Hitherto, genetic origin assignment of marine fish has been hampered...... by the general low levels of genetic differentiation among populations. By using a new concept of studying gene‐associated single nucleotide polymorphisms (SNPs), we show that individual cod can be assigned back to population of origin with unprecedented high levels of precision. We assessed pan...... relevant for controlling illegal fishing, ecolabels, and fisheries management. Our results demonstrate how application of gene‐associated markers will probably revolutionize origin assignment in cod by providing faster, cheaper, and more reliable tools for origin assignment...

  17. Validation of reference genes for quantitative RT-qPCR studies of gene expression in Atlantic cod (Gadus morhua l. during temperature stress

    Directory of Open Access Journals (Sweden)

    Karlsen Hans E

    2011-04-01

    Full Text Available Abstract Background One important physiological response to environmental stress in animals is change in gene expression. To obtain reliable data from gene expression studies using RT-qPCR it is important to evaluate a set of possible reference genes as normalizers for expression. The expression of these candidate genes should be analyzed in the relevant tissues during normal and stressed situations. To find suitable reference genes it was crucial that the genes were stably expressed also during a situation of physiological stress. For poikilotermic animals like cod, changes in temperature are normal, but if the changes are faster than physiological compensation, the animals respond with typical stress responses. It has previously been shown that Atlantic cod show stress responses when elevation of water temperature is faster than 1 degree/day, for this reason we chose hyperthermia as stress agent for this experiment. Findings We here describe the expression of eight candidate reference genes from Atlantic cod (Gadus morhua l. and their stability during thermal stress (temperature elevation of one degree C/day for 5 days. The genes investigated were: Eukaryotic elongation factor 1 alpha, ef1a; 18s ribosomal RNA; 18s, Ubiquitin conjugate protein; ubiq, cytoskeletal beta-actin; actb, major histcompatibility complex I; MHC-I light chain, beta-2 -microglobulin; b2m, cytoskeletal alpha-tubulin; tba1c, acidic ribosomal phosphoprotein; rplp1, glucose-6-phosphate dehydrogenase; g6pd. Their expression were analyzed in 6 tissues (liver, head kidney, intestine, spleen, heart and gills from cods exposed to elevated temperature and compared to a control group. Although there were variations between tissues with respect to reference gene stability, four transcripts were more consistent than the others: ubiq, ef1a, 18s and rplp1. We therefore used these to analyze the expression of stress related genes (heat shock proteins induced during hyperthermia. We found

  18. Seasonal variation in biomarkers in blue mussel (Mytilus edulis), Icelandic scallop (Chlamys islandica) and Atlantic cod (Gadus morhua)-Implications for environmental monitoring in the Barents Sea

    Energy Technology Data Exchange (ETDEWEB)

    Nahrgang, J., E-mail: jasmine.m.nahrgang@uit.no [Akvaplan-niva, FRAM Centre, NO-9296 Tromso (Norway); Brooks, S.J. [Norwegian Institute for Water Research (NIVA), NO-0349 Oslo (Norway); Evenset, A. [Akvaplan-niva, FRAM Centre, NO-9296 Tromso (Norway); Camus, L. [Akvaplan-niva, FRAM Centre, NO-9296 Tromso (Norway); University Centre In Svalbard (UNIS), NO-9171 Longyearbyen (Norway); Jonsson, M.; Smith, T.J. [Akvaplan-niva, FRAM Centre, NO-9296 Tromso (Norway); Lukina, J. [Akvaplan-niva, FRAM Centre, NO-9296 Tromso (Norway); University of Tromso, Faculty of Biosciences, Fisheries and Economics, Department of Arctic and Marine Biosciences, NO-9037 Tromso (Norway); Frantzen, M. [Akvaplan-niva, FRAM Centre, NO-9296 Tromso (Norway); Giarratano, E. [Centro Nacional Patagonico (CENPAT-CONICET), AR-9120 Puerto Madryn (Argentina); Renaud, P.E. [Akvaplan-niva, FRAM Centre, NO-9296 Tromso (Norway); University Centre In Svalbard (UNIS), NO-9171 Longyearbyen (Norway)

    2013-02-15

    In the Barents Sea, the limited data on biological relevant indicators and their responses to various anthropogenic stressors have hindered the development of a consistent scientific basis for selecting indicator species and developing practical procedures for environmental monitoring. Accordingly, the main aim of the present study was to develop a common set of baseline values for contaminants and biomarkers in three species, and to identify their strengths and limitations in monitoring of the Barents Sea. Blue mussel (Mytilus edulis), Icelandic scallop (Chlamys islandica) and Atlantic cod (Gadus morhua) were sampled from a north Norwegian fjord in March, June, September and December 2010. Digestive glands from the bivalve species and liver from Atlantic cod were analysed for biomarkers of oxidative stress (catalase [CAT], glutathione peroxidase [GPX], glutathione-S-transferase activities [GST], lipid peroxidation as thiobarbituric reactive substances [TBARS] and total oxyradical scavenging capacity [TOSC]), biotransformation (ethoxyresorufine-O-deethylase activity [EROD]) and general stress (lysosomal membrane stability [LMS]). Concentrations of polycyclic aromatic hydrocarbons (PAHs) and metals in the bivalves and PAH metabolites in fish bile were quantified. Finally, energy reserves (total lipids, proteins and carbohydrates) and electron transport system (ETS) activity in the digestive gland of the bivalves and liver of Atlantic cod provided background information for reproductive cycle and general physiological status of the organisms. Blue mussel and Icelandic scallop showed very similar trends in biological cycle, biomarker expression and seasonality. Biomarker baselines in Atlantic cod showed weaker seasonal variability. However, important biological events may have been undetected due to the large time intervals between sampling occasions. Physiological biomarkers such as energy reserves and ETS activity were recommended as complementary parameters to the

  19. Seasonal variation in biomarkers in blue mussel (Mytilus edulis), Icelandic scallop (Chlamys islandica) and Atlantic cod (Gadus morhua): implications for environmental monitoring in the Barents Sea.

    Science.gov (United States)

    Nahrgang, J; Brooks, S J; Evenset, A; Camus, L; Jonsson, M; Smith, T J; Lukina, J; Frantzen, M; Giarratano, E; Renaud, P E

    2013-02-01

    In the Barents Sea, the limited data on biological relevant indicators and their responses to various anthropogenic stressors have hindered the development of a consistent scientific basis for selecting indicator species and developing practical procedures for environmental monitoring. Accordingly, the main aim of the present study was to develop a common set of baseline values for contaminants and biomarkers in three species, and to identify their strengths and limitations in monitoring of the Barents Sea. Blue mussel (Mytilus edulis), Icelandic scallop (Chlamys islandica) and Atlantic cod (Gadus morhua) were sampled from a north Norwegian fjord in March, June, September and December 2010. Digestive glands from the bivalve species and liver from Atlantic cod were analysed for biomarkers of oxidative stress (catalase [CAT], glutathione peroxidase [GPX], glutathione-S-transferase activities [GST], lipid peroxidation as thiobarbituric reactive substances [TBARS] and total oxyradical scavenging capacity [TOSC]), biotransformation (ethoxyresorufine-O-deethylase activity [EROD]) and general stress (lysosomal membrane stability [LMS]). Concentrations of polycyclic aromatic hydrocarbons (PAHs) and metals in the bivalves and PAH metabolites in fish bile were quantified. Finally, energy reserves (total lipids, proteins and carbohydrates) and electron transport system (ETS) activity in the digestive gland of the bivalves and liver of Atlantic cod provided background information for reproductive cycle and general physiological status of the organisms. Blue mussel and Icelandic scallop showed very similar trends in biological cycle, biomarker expression and seasonality. Biomarker baselines in Atlantic cod showed weaker seasonal variability. However, important biological events may have been undetected due to the large time intervals between sampling occasions. Physiological biomarkers such as energy reserves and ETS activity were recommended as complementary parameters to the

  20. The use of multibeam and split-beam echo sounders for assessing biomass and distribution of spring-spawning Atlantic cod in the Gulf of Maine

    Science.gov (United States)

    Gurshin, Christopher William Damon

    This research focused on advancing the application of split-beam and multibeam echo sounding to remotely locate and describe spatial distribution, and to provide a relative measure of abundance of the spring-spawning Atlantic cod (Gadus morhua) in the western Gulf of Maine. Specifically, the main objectives of this research were 1) to test the feasibility of a multibeam echo sounder to detect changes in volume backscatter proportional to incrementally decreasing quantities of cod held in a submerged cage, and to compare results to a split-beam echo sounder; 2) to describe the spatio-temporal distribution and estimate biomass of spring-spawning cod in the Gulf of Maine cod spawning protection area (GOMCSPA) by repeated acoustic and trawl surveys; and 3) to determine a predictive relation between target strength and length for 38-kHz and 120-kHz split-beam echo sounders and a 300-kHz multibeam echo sounder, and characterize other factors affecting backscattering of sound. The multibeam echo sounder detected a small and large reduction in volume backscatter proportional to reductions in stocking density of caged cod, while the split-beam echo sounder only detected a large reduction in stocking density. The spatial information from the multibeam echo sounder helped interpret and explain results from the split-beam echo sounder. Repeated acoustic and trawl surveys showed cod were relatively widespread in the survey area in May, but congregated at higher densities in areas adjacent to two elevated bathymetric features. Most cod converged to a single location in June, and were at a higher concentration than observations in May. This congregation decreased in size and density in July. Survey estimates of cod biomass ranged 184-494 mt in May, 138-617 mt in June, and 39-135 mt in July, depending on the estimation method. Based on echo classification and extrapolation, cod biomass to the GOMCSPA ranged 260-466 mt in May, 196-513 mt in June, and 91-198 mt in July. The biomass

  1. Effects of oil pollution and persistent organic pollutants (POPs) on glycerophospholipids in liver and brain of male Atlantic cod (Gadus morhua).

    Science.gov (United States)

    Bratberg, Mari; Olsvik, Pål A; Edvardsen, Rolf B; Brekken, Hans Kristian; Vadla, Reidun; Meier, Sonnich

    2013-02-01

    Fish in the North Sea are exposed to relatively high levels of halogenated compounds in addition to the pollutants released by oil production activities. In this study male Atlantic cod (Gadus morhua) were orally exposed to environmental realistic levels (low and high) of weathered crude oil and/or a mixture of POPs for 4weeks. Lipid composition in brain and in liver extracts were analysed in order to assess the effects of the various pollutants on membrane lipid composition and fatty acid profiles. Transcriptional effects in the liver were studied by microarray and quantitative real-time RT-PCR. Chemical analyses confirmed uptake of polychlorinated biphenyls (PCBs) and chlorinated pesticides, polybrominated diphenyl ethers (PBDEs) and perfluorooctanesulfonate (PFOS) in the liver and excretion of metabolites of polyaromatic hydrocarbons (PAHs) in the bile. Treatment with POPs and/or crude oil did not induce significant changes in lipid composition in cod liver. Only a few minor changes were observed in the fatty acid profile of the brain and the lipid classes in the liver. The hypothesis that pollution from oil or POPs at environmental realistic levels alters the lipid composition in marine fish was therefore not confirmed in this study. However, the transcriptional data suggest that the fish were affected by the treatment at the mRNA level. This study suggests that a combination of oil and POPs induce the CYP1a detoxification system and gives an increase in the metabolism and clearing rate of PAHs and POPs, but with no effects on membrane lipids in male Atlantic cod.

  2. Differential Survival among Batches of Atlantic Cod (Gadus morhua L. from Fertilisation through to Post-Metamorphosis.

    Directory of Open Access Journals (Sweden)

    Petra E Petersen

    Full Text Available Aquaculture production of cod has decreased from over 20,000 tonnes in 2009 to less than 2,000 tonnes in 2014 and the industry faces many challenges, one of which is high and unpredictably variable mortality rates in the early life stages. Hence, full-cycle farming with hatchery produced juveniles is still considered unprofitable compared to fisheries and on-growing of wild cod. In the present study, potential batch differences in progeny survival of wild-caught, hatchery-spawned Faroe Bank cod (Gadus morhua L. were investigated at two defined periods during early life history; i the embryo stage (60 day degrees post fertilisation and ii the fry stage (110 days post hatch, post metamorphosis. The fry stage experiment was conducted in three replicates (N = 300 per replicate, and a panel of three polymorphic microsatellite markers was used for parental analysis. Mean survival rate at the embryo stage was 69% (± 20% SD. Survival was positively associated with egg diameter (P < 0.01, explaining 90% of the variation in egg survival rates. The data were too scarce to conclude either way concerning a possible correlation between survival rates between the two periods (P < 0.10. Offspring from three batches (from a total of eight dominated in the fry stage, contributing over 90% of the progeny, and results were consistent over all three replicate tanks. The skewed batch representation observed may be of relevance to the effective management of selective breeding programmes for cod.

  3. The third serine proteinase with chymotrypsin specificity isolated from Atlantic cod (Gadus morhua) is a type-II elastase

    DEFF Research Database (Denmark)

    Asgeirsson, B; Leth-Larsen, Rikke; Thórólfsson, M;

    1998-01-01

    efficiency of elastase C. The effects of several inhibitors on cod elastase C were identical to effects on chymotrypsins variants A and B, but dissimilar when compared with porcine pancreatic elastase. On the basis of the specificity and amino acid sequence, we conclude that the enzyme under study is most...

  4. In vitro and ex vivo models indicate that the molecular clock in fast skeletal muscle of Atlantic cod is not autonomous.

    Science.gov (United States)

    Lazado, Carlo C; Kumaratunga, Hiruni P S; Nagasawa, Kazue; Babiak, Igor; Caipang, Christopher Marlowe A; Fernandes, Jorge M O

    2014-10-01

    The notion that the circadian rhythm is exclusively regulated by a central clock has been challenged by the discovery of peripheral oscillators. These peripheral clocks are known to have a direct influence on the biological processes in a tissue or cell. In fish, several peripheral clocks respond directly to light, thus raising the hypothesis of autonomous regulation. Several clock genes are expressed with daily rhythmicity in Atlantic cod (Gadus morhua) fast skeletal muscle. In the present study, myosatellite cell culture and short-term cultured fast skeletal muscle explant models were developed and characterized, in order to investigate the autonomy of the clock system in skeletal muscle of Atlantic cod. Myosatellite cells proliferated and differentiated in vitro, as shown by the changes in cellular and myogenic gene markers. The high expression of myogenic differentiation 1 during the early days post-isolation implied the commitment to myogenic lineage and the increasing mRNA levels of proliferating cell nuclear antigen (pcna) indicated the proliferation of the cells in vitro. Transcript levels of myogenic marker genes such as pcna and myogenin increased during 5 days in culture of skeletal muscle explants, indicating that the muscle cells were proliferating and differentiating under ex vivo conditions. Transcript levels of the clock gene aryl hydrocarbon receptor nuclear translocator-like 2 (arntl2) in myosatellite cells showed no daily oscillation regardless of photoperiod manipulation. On the other hand, mRNA levels of the clock gene circadian locomotor output cycles kaput (clock) showed circadian rhythmicity in 5-day-old skeletal muscle explant under different photoperiod regimes. The expression of arntl2, cryptochrome2 (cry2), period 2a (per2a) and nuclear receptor subfamily 1, group D, member 1 was not rhythmic in muscle explants but photoperiod manipulation had a significant effect on mRNA levels of cry2 and per2a. Taken together, the lack of rhythmicity

  5. Northeast Regional Cod Tagging Program

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Scientific justification: Canadian and US stock assessments for Atlantic cod indicate considerable fluctuation in stock abundance and recruitment over the last 20...

  6. Industry Based Survey (IBS) Cod

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The "Gulf of Maine Atlantic Cod Industry-Based Survey" was a collaboration of the Massachusetts Division of Marine Fisheries and the fishing industry, with support...

  7. Conditions for instant electrical stunning of farmed Atlantic cod after de-watering, maintenance of unconsciousness, effects of stress, and fillet quality — A comparison with AQUI-S™

    NARCIS (Netherlands)

    Erikson, U.; Lambooij, E.; Digre, H.; Reimert, H.G.M.; Bondø, M.; Vis, van de H.

    2012-01-01

    Electrical stunning of farmed Atlantic cod is a method used to render the fish unconscious before further processing. However, evaluations of the stunning method at plants have shown that the electrical parameters need to be optimized to achieve instant stunning and prolonged duration of unconscious

  8. Productivity patterns and abundance-area relationships in 3 marine fish species (cod,herring and haddock); meta-analyses on the effects of temperature, life-history andhabitat size across the N Atlantic

    DEFF Research Database (Denmark)

    Mantzouni, Irene; MacKenzie, Brian

    on the biological and ecological characteristics of thestocks. Our aim was to identify the patterns of the temperature, habitat size and life-historyeffects on the SR dynamics across the N Atlantic range of 3 species; cod (21 stocks), herring(16 stocks) and haddock (7 stocks). Using hierarchical, Bayesian SR models...

  9. Cortisol levels and expression of stress- and apoptotic-related genes in the embryos of Atlantic cod, Gadus morhua following exposure to air

    DEFF Research Database (Denmark)

    Marlowe, Christopher; Caipang, A.; Fagutao, Ferdinand F.;

    2015-01-01

    determined before the application of the stressor and at 0.5, 1 and 24 h post-exposure. There was no significant difference in the total cortisol levels of the fertilized eggs before and after handling stress. There was high expression level of hsp70 and sod before application of the stressor and......Embryos (morula stage) of Atlantic cod, Gadus morhua L., were collected and subjected to air exposure for 2 min. followed by recovery at ambient conditions in the rearing container. Total immunoreactive cortisol and transcription of selected stress- and apoptosis-related genes of the embryos were...... significantly increased at 0.5 h postexposure. The expression levels of cat and gpx were weak to moderate and were not affected by the stressor. The apoptotic genes, mcl1 and NR-13 were highly expressed and significantly increased after exposure to air. Bcl-X1 and Bcl-X2 were moderately expressed in the control...

  10. Pituitary gonadotropin and testicular gonadotropin receptor expression in Atlantic cod (Gadusmorhua L.) during the first reproductive season: Effects of photoperiod modulation.

    Science.gov (United States)

    de Almeida, Fernanda Ferreira Loureiro; Andersson, Eva; Mittelholzer, Christian; Karlsen, Orjan; Taranger, Geir Lasse; Schulz, Rüdiger W

    2011-08-01

    Pituitary mRNA levels of gonadotropin β-subunits and of their cognate receptors in the testis were studied during puberty in Atlantic cod under normal and experimental photoperiod conditions that suppressed, delayed or accelerated testis maturation. Results are discussed in context with changes in testicular histology and plasma androgen levels, considered as end points of gonadotropic regulation. Up-regulation of fshb was closely associated with the onset of puberty, decreased when spermatogenesis was completed and reached minimum levels after spawning. These results demonstrate, for the first time using an experimental approach, that activation of Fsh-dependent signaling is associated with spermatogonial proliferation and formation of spermatogenic cysts. Changes in fshr expression were less prominent and could be explained by changes in the cellular composition and RNA content of cod testis tissue. At more advanced stages of development (spermiogenesis, spermiation and spawning), lhb and, one month later, lhcgr transcript levels increased and reached peak values in spawning fish, in a positive feedback loop involving plasma androgens and Lh/Lhcgr-dependent signaling. This loop was broken by a loss of lhb expression at the end of the spawning season. Continuous light (LL) from summer solstice, ~8 months prior to spawning, suppressed the start of testis maturation and the changes in gonadotropin and receptor mRNA levels, while LL from winter solstice initially up-regulated lhb and lhcgr expression, before resulting in a precocious termination of the spawning season and low expression of all four genes. Our studies provide experimental evidence for a clear functional discrimination of cod gonadotropins. PMID:21605561

  11. Pituitary gonadotropin and testicular gonadotropin receptor expression in Atlantic cod (Gadusmorhua L.) during the first reproductive season: Effects of photoperiod modulation.

    Science.gov (United States)

    de Almeida, Fernanda Ferreira Loureiro; Andersson, Eva; Mittelholzer, Christian; Karlsen, Orjan; Taranger, Geir Lasse; Schulz, Rüdiger W

    2011-08-01

    Pituitary mRNA levels of gonadotropin β-subunits and of their cognate receptors in the testis were studied during puberty in Atlantic cod under normal and experimental photoperiod conditions that suppressed, delayed or accelerated testis maturation. Results are discussed in context with changes in testicular histology and plasma androgen levels, considered as end points of gonadotropic regulation. Up-regulation of fshb was closely associated with the onset of puberty, decreased when spermatogenesis was completed and reached minimum levels after spawning. These results demonstrate, for the first time using an experimental approach, that activation of Fsh-dependent signaling is associated with spermatogonial proliferation and formation of spermatogenic cysts. Changes in fshr expression were less prominent and could be explained by changes in the cellular composition and RNA content of cod testis tissue. At more advanced stages of development (spermiogenesis, spermiation and spawning), lhb and, one month later, lhcgr transcript levels increased and reached peak values in spawning fish, in a positive feedback loop involving plasma androgens and Lh/Lhcgr-dependent signaling. This loop was broken by a loss of lhb expression at the end of the spawning season. Continuous light (LL) from summer solstice, ~8 months prior to spawning, suppressed the start of testis maturation and the changes in gonadotropin and receptor mRNA levels, while LL from winter solstice initially up-regulated lhb and lhcgr expression, before resulting in a precocious termination of the spawning season and low expression of all four genes. Our studies provide experimental evidence for a clear functional discrimination of cod gonadotropins.

  12. Copepods enhance nutritional status, growth and development in Atlantic cod (Gadus morhua L. larvae — can we identify the underlying factors?

    Directory of Open Access Journals (Sweden)

    Ørjan Karlsen

    2015-05-01

    Full Text Available The current commercial production protocols for Atlantic cod depend on enriched rotifers and Artemia during first-feeding, but development and growth remain inferior to fish fed natural zooplankton. Two experiments were conducted in order to identify the underlying factors for this phenomenon. In the first experiment (Exp-1, groups of cod larvae were fed either (a natural zooplankton, mainly copepods, increasing the size of prey as the larvae grew or (b enriched rotifers followed by Artemia (the intensive group. In the second experiment (Exp-2, two groups of larvae were fed as in Exp-1, while a third group was fed copepod nauplii (approximately the size of rotifers throughout the larval stage. In both experiments, growth was not significantly different between the groups during the first three weeks after hatching, but from the last part of the rotifer feeding period and onwards, the growth of the larvae fed copepods was higher than that of the intensive group. In Exp-2, the growth was similar between the two copepod groups during the expeimental period, indicating that nutrient composition, not prey size caused the better growth on copepods. Analyses of the prey showed that total fatty acid composition and the ratio of phospholipids to total lipids was slightly different in the prey organisms, and that protein, taurine, astaxanthin and zinc were lower on a dry weight basis in rotifers than in copepods. Other measured nutrients as DHA, all analysed vitamins, manganese, copper and selenium were similar or higher in the rotifers. When compared to the present knowledge on nutrient requirements, protein and taurine appeared to be the most likely limiting nutrients for growth in cod larvae fed rotifers and Artemia. Larvae fed rotifers/Artemia had a higher whole body lipid content than larvae fed copepods at the end of the experiment (stage 5 after the fish had been fed the same formulated diet for approximately 2 weeks.

  13. A Diverse Family of Host-Defense Peptides (Piscidins) Exhibit Specialized Anti-Bacterial and Anti-Protozoal Activities in Fishes.

    Science.gov (United States)

    Salger, Scott A; Cassady, Katherine R; Reading, Benjamin J; Noga, Edward J

    2016-01-01

    Conventional antibiotics and other chemical-based drugs are currently one of the most common methods used to control disease-related mortality in animal agriculture. Use of the innate immune system to decrease disease related mortalities is a novel alternative to conventional drugs. One component of the innate immune system is the host-defense peptides, also known as antimicrobial peptides. Host-defense peptides are typically small, amphipathic, α-helical peptides with a broad-spectrum of action against viral, bacterial, fungal, and/or protozoal pathogens. Piscidins are host-defense peptides first discovered in the hybrid striped bass (white bass, Morone chrysops, x striped bass, M. saxatilis). In this paper we identify four new piscidin isoforms in the hybrid striped bass and describe their tissue distributions. We also determine the progenitor species of origin of each piscidin (orthology) and propose a revised nomenclature for this newly described piscidin family based on a three class system. The Class I piscidins (22 amino acids in length; striped bass and white bass piscidin 1 and piscidin 3) show broad-spectrum activity against bacteria and ciliated protozoans, while the Class III piscidins (55 amino acids in length; striped bass and white bass piscidin 6 and striped bass piscidin 7) primarily show anti-protozoal activity. The Class II piscidins (44-46 amino acids in length; striped bass and white bass piscidin 4 and white bass piscidin 5) have a level of activity against bacteria and protozoans intermediate to Classes I and III. Knowledge of piscidin function and activity may help in the future development of disease-resistant lines of striped bass and white bass that could be used to produce superior hybrids for aquaculture. PMID:27552222

  14. Effect of sub-lethal exposure to ultraviolet radiation on the escape performance of Atlantic cod larvae (Gadus morhua.

    Directory of Open Access Journals (Sweden)

    Yuichi Fukunishi

    Full Text Available The amount of ultraviolet (UV radiation reaching the earth's surface has increased due to depletion of the ozone layer. Several studies have reported that UV radiation reduces survival of fish larvae. However, indirect and sub-lethal impacts of UV radiation on fish behavior have been given little consideration. We observed the escape performance of larval cod (24 dph, SL: 7.6±0.2 mm; 29 dph, SL: 8.2±0.3 mm that had been exposed to sub-lethal levels of UV radiation vs. unexposed controls. Two predators were used (in separate experiments: two-spotted goby (Gobiusculus flavescens; a suction predator and lion's mane jellyfish (Cyanea capillata; a "passive" ambush predator. Ten cod larvae were observed in the presence of a predator for 20 minutes using a digital video camera. Trials were replicated 4 times for goby and 5 times for jellyfish. Escape rate (total number of escapes/total number of attacks ×100, escape distance and the number of larvae remaining at the end of the experiment were measured. In the experiment with gobies, in the UV-treated larvae, both escape rate and escape distance (36%, 38±7.5 mm respectively were significantly lower than those of control larvae (75%, 69±4.7 mm respectively. There was a significant difference in survival as well (UV: 35%,63%. No apparent escape response was observed, and survival rate was not significantly different, between treatments (UV: 66%,74% in the experiment with jellyfish. We conclude that the effect and impact of exposure to sub-lethal levels of UV radiation on the escape performance of cod larvae depends on the type of predator. Our results also suggest that prediction of UV impacts on fish larvae based only on direct effects are underestimations.

  15. Effects of dietary fatty acids on the production and quality of eggs and larvae of Atlantic cod (Gadus morhua L.)

    DEFF Research Database (Denmark)

    Røjbek, Maria; Støttrup, Josianne; Jacobsen, Charlotte;

    2014-01-01

    and end of spawning. Lipid composition and egg and larval quality of 34 family crosses were investigated. Results indicated that ARA uptake into eggs from broodstock diet was highly efficient achieving proportions of ARA up to 84% higher in eggs than in the diet. EPA was 42–76% higher, and DHA was 155......–173% higher in eggs than in diets. Cod fed the diet with the lowest EPA/ARA ratio had the greatest egg production. Eggs from fish on a diet with high ARA level had significantly higher fertilization and hatching success than those fed low levels of ARA. This diet produced on average 71 viable eggs g 1 female...

  16. Early life of key fish species, capelin Mallotus villosus and Atlantic cod Gadus morhua, in West Greenland

    DEFF Research Database (Denmark)

    Malanski, Evandro

    Research involving the processes governing early life of fishes is important for understanding recruitment to the adult population. The forcing factors, like oceanographic processes and the associated plankton communities, impact the distribution and transport of fish larvae and determine...... their growth conditions, survival and recruitment to the adult stock. The temporal and spatial overlap of fish larvae and their prey is essential for their feeding, growth and survival. Investigations of the prey size spectra in fish larvae made possible to observe inter-specific prey competition and gain...... for the fish larvae during the summer. The duration of the productive season is of great importance for the early life of fish. The present thesis investigates the diets of capelin and cod in the subarctic Kapisigdlit, as well as the feeding of non-commercial larval fish in the entire Godthåbsfjord system...

  17. THE EFFECT OF HYPOXIA ON THE MAXIMUM MATABOLIC RATE AND SPECIFIC DYNAMIC ACTION IN ATLANTIC COD Gadus morhua

    DEFF Research Database (Denmark)

    Steffensen, John Fleng

    2010-01-01

    the fi sh. The fish were fed single rations of fillets of herring, equivalent to 5 % wet body mass. Hypoxia was controlled by an oxygen regulator injecting compressed nitrogen in the water via a solenoid valve. In addition the maximum metabolic rate of starved fish was measured in normoxia and 4 levels...... and fish kept at high densities. Feeding is followed by an increase in the metabolic rate. termed the specific dynamic action (SDA). SDA integrates all the energetic expenditures involved in feeding. It is generally agreed that the increased metabolic rate is caused by biochemical transformation of food...... of hypoxia compared. Maximum metabolic rate compared to standard metabolic rate is termed the Scope for Activity. The results showed that hypoxia at 6.3 kPa does influence the SDA. The effect on the SDA curve on cod fed 5 % of the wet body mass was that the peak metabolic rate was significantly depressed (44...

  18. Effects of hypoxic exposure during feeding on SDA and postprandial cardiovascular physiology in the Atlantic cod, Gadus morhua

    DEFF Research Database (Denmark)

    Behrens, Jane; Axelsson, Michael; Neuenfeldt, Stefan;

    2012-01-01

    on fed G. morhua in order to understand how the cardio-respiratory system of feeding fish respond to a period of hypoxia and a subsequent return to normoxia. These were exposed to 35% water oxygen saturation for 90 minutes, equivalent to the time and oxygen level cod voluntarily endure when searching...... for food in the Bornholm Basin. We found that i) gastric and intestinal blood flows, cardiac output and MO2 increased after feeding, ii) gastric and intestinal blood flows were spared in hypoxia, and iii) there were no indications of an oxygen debt at the end of the hypoxic period. The magnitude and time...... (MO2), i.e. the SDA, leading to a disturbed digestion. Additionally, a restricted oxygen uptake could result in an oxygen debt that needs to be compensated for upon return to normoxic waters and this may also affect the ability to process the food. Long-term cardio-respiratory measurements were made...

  19. Adjustments of molecular key components of branchial ion and pH regulation in Atlantic cod (Gadus morhua) in response to ocean acidification and warming.

    Science.gov (United States)

    Michael, Katharina; Kreiss, Cornelia M; Hu, Marian Y; Koschnick, Nils; Bickmeyer, Ulf; Dupont, Sam; Pörtner, Hans-O; Lucassen, Magnus

    2016-03-01

    Marine teleost fish sustain compensation of extracellular pH after exposure to hypercapnia by means of efficient ion and acid-base regulation. Elevated rates of ion and acid-base regulation under hypercapnia may be stimulated further by elevated temperature. Here, we characterized the regulation of transepithelial ion transporters (NKCC1, NBC1, SLC26A6, NHE1 and 2) and ATPases (Na(+)/K(+) ATPase and V-type H(+) ATPase) in gills of Atlantic cod (Gadus morhua) after 4 weeks of exposure to ambient and future PCO2 levels (550 μatm, 1200 μatm, 2200 μatm) at optimum (10 °C) and summer maximum temperature (18 °C), respectively. Gene expression of most branchial ion transporters revealed temperature- and dose-dependent responses to elevated PCO2. Transcriptional regulation resulted in stable protein expression at 10 °C, whereas expression of most transport proteins increased at medium PCO2 and 18 °C. mRNA and protein expression of distinct ion transport proteins were closely co-regulated, substantiating cellular functional relationships. Na(+)/K(+) ATPase capacities were PCO2 independent, but increased with acclimation temperature, whereas H(+) ATPase capacities were thermally compensated but decreased at medium PCO2 and 10 °C. When functional capacities of branchial ATPases were compared with mitochondrial F1Fo ATP-synthase strong correlations of F1Fo ATP-synthase and ATPase capacities generally indicate close coordination of branchial aerobic ATP demand and supply. Our data indicate physiological plasticity in the gills of cod to adjust to a warming, acidifying ocean within limits. In light of the interacting and non-linear, dose-dependent effects of both climate factors the role of these mechanisms in shaping resilience under climate change remains to be explored.

  20. Discovery of miRNAs and Their Corresponding miRNA Genes in Atlantic Cod (Gadus morhua): Use of Stable miRNAs as Reference Genes Reveals Subgroups of miRNAs That Are Highly Expressed in Particular Organs

    Science.gov (United States)

    Andreassen, Rune; Rangnes, Fredrik; Sivertsen, Maria; Chiang, Michelle; Tran, Michelle; Worren, Merete Molton

    2016-01-01

    Background Atlantic cod (Gadus morhua) is among the economically most important species in the northern Atlantic Ocean and a model species for studying development of the immune system in vertebrates. MicroRNAs (miRNAs) are an abundant class of small RNA molecules that regulate fundamental biological processes at the post-transcriptional level. Detailed knowledge about a species miRNA repertoire is necessary to study how the miRNA transcriptome modulate gene expression. We have therefore discovered and characterized mature miRNAs and their corresponding miRNA genes in Atlantic cod. We have also performed a validation study to identify suitable reference genes for RT-qPCR analysis of miRNA expression in Atlantic cod. Finally, we utilized the newly characterized miRNA repertoire and the dedicated RT-qPCR method to reveal miRNAs that are highly expressed in certain organs. Results The discovery analysis revealed 490 mature miRNAs (401 unique sequences) along with precursor sequences and genomic location of the miRNA genes. Twenty six of these were novel miRNA genes. Validation studies ranked gmo-miR-17-1—5p or the two-gene combination gmo-miR25-3p and gmo-miR210-5p as most suitable qPCR reference genes. Analysis by RT-qPCR revealed 45 miRNAs with significantly higher expression in tissues from one or a few organs. Comparisons to other vertebrates indicate that some of these miRNAs may regulate processes like growth, lipid metabolism, immune response to microbial infections and scar damage repair. Three teleost-specific and three novel Atlantic cod miRNAs were among the differentially expressed miRNAs. Conclusions The number of known mature miRNAs was considerably increased by our identification of miRNAs and miRNA genes in Atlantic cod. This will benefit further functional studies of miRNA expression using deep sequencing methods. The validation study showed that stable miRNAs are suitable reference genes for RT-qPCR analysis of miRNA expression. Applying RT-qPCR we

  1. Discovery of miRNAs and Their Corresponding miRNA Genes in Atlantic Cod (Gadus morhua: Use of Stable miRNAs as Reference Genes Reveals Subgroups of miRNAs That Are Highly Expressed in Particular Organs.

    Directory of Open Access Journals (Sweden)

    Rune Andreassen

    Full Text Available Atlantic cod (Gadus morhua is among the economically most important species in the northern Atlantic Ocean and a model species for studying development of the immune system in vertebrates. MicroRNAs (miRNAs are an abundant class of small RNA molecules that regulate fundamental biological processes at the post-transcriptional level. Detailed knowledge about a species miRNA repertoire is necessary to study how the miRNA transcriptome modulate gene expression. We have therefore discovered and characterized mature miRNAs and their corresponding miRNA genes in Atlantic cod. We have also performed a validation study to identify suitable reference genes for RT-qPCR analysis of miRNA expression in Atlantic cod. Finally, we utilized the newly characterized miRNA repertoire and the dedicated RT-qPCR method to reveal miRNAs that are highly expressed in certain organs.The discovery analysis revealed 490 mature miRNAs (401 unique sequences along with precursor sequences and genomic location of the miRNA genes. Twenty six of these were novel miRNA genes. Validation studies ranked gmo-miR-17-1-5p or the two-gene combination gmo-miR25-3p and gmo-miR210-5p as most suitable qPCR reference genes. Analysis by RT-qPCR revealed 45 miRNAs with significantly higher expression in tissues from one or a few organs. Comparisons to other vertebrates indicate that some of these miRNAs may regulate processes like growth, lipid metabolism, immune response to microbial infections and scar damage repair. Three teleost-specific and three novel Atlantic cod miRNAs were among the differentially expressed miRNAs.The number of known mature miRNAs was considerably increased by our identification of miRNAs and miRNA genes in Atlantic cod. This will benefit further functional studies of miRNA expression using deep sequencing methods. The validation study showed that stable miRNAs are suitable reference genes for RT-qPCR analysis of miRNA expression. Applying RT-qPCR we have identified

  2. Genomic signatures of local directional selection in a high gene flow marine organism, the Atlantic cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Eg Nielsen, Einar; Hansen, Jakob Hemmer; Poulsen, Nina Aagaard;

    2009-01-01

    Background: Marine fishes have been shown to display low levels of genetic structuring and associated high levels of gene flow, suggesting shallow evolutionary trajectories and, possibly, limited or lacking adaptive divergence among local populations. We investigated variation in 98 gene...... selection in local demes, or closely linked to loci under selection. Likewise, on a regional south/north transect of central and eastern Atlantic populations, seven loci displayed strongly elevated levels of genetic differentiation. Selection patterns among populations appeared to be relatively widespread...... archived otoliths from a Faeroese population demonstrated stability of the intra-population variation over 24 years. An exploratory landscape genetic analysis was used to elucidate potential effects of the most likely environmental factors responsible for the signatures of local adaptation. We found...

  3. Abolition of reflex bradycardia by cardiac vagotomy has no effect on the regulation of oxygen uptake by Atlantic cod in progressive hypoxia

    DEFF Research Database (Denmark)

    McKenzie, David; Skov, Peter Vilhelm; Taylor, E.W.T.;

    2009-01-01

    -operated cod (mean +/- s.e.m., n=9). Sham-operated cod exhibited transient profound bradycardia following oxygen chemoreceptor stimulation by bolus injection of sodium cyanide into the buccal cavity (2 mg in 2 ml seawater), but this cardiac chemoreflex was abolished in denervated cod. Both groups, however...

  4. Vitamin A and arachidonic acid altered the skeletal mineralization in Atlantic cod (Gadus morhua) larvae without any interactions on the transcriptional level.

    Science.gov (United States)

    Lie, Kai Kristoffer; Kvalheim, Karen; Rasinger, Josef Daniel; Harboe, Torstein; Nordgreen, Andreas; Moren, Mari

    2016-01-01

    The main object of this study was to evaluate the impact of different levels of vitamin A (VA) and arachidonic acid (ARA) in relation to eicosapentaenoic acid (EPA) on mineralization and gene expression in Atlantic cod larvae (Gadus morhua). First-feeding larvae were fed enriched rotifers from start-feeding until 29 days post hatch (dph). Larvae in four tanks were fed one of the following diets: control (EPA/ARA ratio: 15.8, 0.9μg VA g(-1)), control+VA (EPA/ARA ratio: 15.8, 7.8μg VA g(-1)), High ARA (EPA/ARA ratio: 0.9, 1.5μg VA g(-1)) or High ARA+VA (EPA/ARA ratio: 0.9, 12.0μg VA g(-1)). Larvae fed High ARA+VA were shorter at 29dph compared to the other groups and had significantly less mineralized bones when comparing larvae of similar size, showing interaction effects between VA and ARA. Although transcriptomic analysis did not reveal any interaction effects, a higher number of genes were differentially expressed in the high ARA fed larvae compared to control+VA fed larvae. Furthermore, bglap1, bglap2 and col10a1 were all down-regulated in larvae fed High ARA-diets and to a greater extent than larvae fed VA supplemented diet, indicating an additive effect on mineralization. In conclusion, this study showed that the dietary increase in ARA and VA altered the skeletal metabolism during larval development, most likely through signaling pathways specific for each nutrient rather than an interaction. The present study also demonstrates that VA could affect the larval response to ARA, even within the accepted non-toxic/non-deficient range.

  5. Differential impacts of elevated CO2 and acidosis on the energy budget of gill and liver cells from Atlantic cod, Gadus morhua.

    Science.gov (United States)

    Stapp, L S; Kreiss, C M; Pörtner, H O; Lannig, G

    2015-09-01

    Ocean acidification impacts fish and other marine species through increased seawater PCO2 levels (hypercapnia). Knowledge of the physiological mechanisms mediating effects in various tissues of fish is incomplete. Here we tested the effects of extracellular hypercapnia and acidosis on energy metabolism of gill and liver cells of Atlantic cod. Exposure media mimicked blood conditions in vivo, either during normo- or hypercapnia and at control or acidic extracellular pH (pHe). We determined metabolic rate and energy expenditure for protein biosynthesis, Na(+)/K(+)-ATPase and H(+)-ATPase and considered nutrition status by measurements of metabolic rate and protein biosynthesis in media with and without free amino acids (FAA). Addition of FAA stimulated hepatic but not branchial oxygen consumption. Normo- and hypercapnic acidosis as well as hypercapnia at control pHe depressed metabolic stimulation of hepatocytes. In gill cells, acidosis depressed respiration independent of PCO2 and FAA levels. For both cell types, depressed respiration was not correlated with the same reduction in energy allocated to protein biosynthesis or Na(+)/K(+)-ATPase. Hepatic energy expenditure for protein synthesis and Na(+)/K(+)-ATPase was even elevated at acidic compared to control pHe suggesting increased costs for ion regulation and cellular reorganization. Hypercapnia at control pHe strongly reduced oxygen demand of branchial Na(+)/K(+)-ATPase with a similar trend for H(+)-ATPase. We conclude that extracellular acidosis triggers metabolic depression in gill and metabolically stimulated liver cells. Additionally, hypercapnia itself seems to limit capacities for metabolic usage of amino acids in liver cells while it decreases the use and costs of ion regulatory ATPases in gill cells.

  6. How cod shapes its world

    NARCIS (Netherlands)

    A. van Leeuwen; A.M. de Roos; L. Persson

    2008-01-01

    Cod stocks in the North West Atlantic and the Baltic Sea have shown similar dynamics in recent decades with a rapid decline in abundance and a lack of stock recovery following a period of large biomass. We explore whether the lack of recovery can be ascribed to an emergent Allee effect, which is a m

  7. Comparison of protein expression in plasma from nonylphenol and bisphenol A-exposed Atlantic cod (Gadus morhua) and turbot (Scophthalmus maximus) by use of SELDI-TOF

    Energy Technology Data Exchange (ETDEWEB)

    Larsen, Bodil K. [International Research Institute of Stavanger (IRIS) AS, Mekjarvik 12, N-4070 Randaberg (Norway)]. E-mail: Bodil.larsen@irisresearch.no; Bjornstad, Anne [International Research Institute of Stavanger (IRIS) AS, Mekjarvik 12, N-4070 Randaberg (Norway); Sundt, Rolf C. [International Research Institute of Stavanger (IRIS) AS, Mekjarvik 12, N-4070 Randaberg (Norway); Taban, Ingrid C. [International Research Institute of Stavanger (IRIS) AS, Mekjarvik 12, N-4070 Randaberg (Norway); Pampanin, Daniela M. [International Research Institute of Stavanger (IRIS) AS, Mekjarvik 12, N-4070 Randaberg (Norway); Andersen, Odd Ketil [International Research Institute of Stavanger (IRIS) AS, Mekjarvik 12, N-4070 Randaberg (Norway)

    2006-06-01

    The overall objective of this study was to compare the expression of plasma proteins in juvenile cod and turbot after a 3 week exposure to two different chemicals known to be estrogenic: 4-nonylphenol (NP, 29 {mu}g/L) and bisphenol A (BPA, 59 {mu}g/L). ProteinChip[reg] array technology in combination with surfaced enhanced laser desorption ionisation-time of flight (SELDI-TOF) was used to investigate general responses in plasma proteins. In addition, an indirect enzyme-linked immunosorbent assay (ELISA) was used to analyse two specific biomarkers of estrogenic exposure, vitellogenin (Vtg) and zona radiata protein (Zrp) in plasma. Both methods revealed clear species specific responses. In cod, 67% of significantly altered proteins showed the same response (up or down regulated) in NP and BPA exposed animals (males and females combined). The rest were either specific to NP (10%), BPA (19%) or they showed opposite responses to the two chemicals (4%). In contrast, only 20% of significantly altered proteins were common for NP and BPA exposed turbot: 60% were altered only in NP and 17% only in BPA. Furthermore, in BPA exposed cod, 77% of the responses were common for male and females, whereas turbot showed only 21% similarity for the two genders. However, NP exposed male and female turbot showed 88% similarity in responses. As gender was not determined in NP exposed cod, gender specific responses could not be determined. ELISA results supported that cod responded clearly to both chemicals as a large increase was observed in Vtg and Zrp levels. Turbot responded strongly to NP, but seemed only slightly affected by BPA. Overall, the results indicated that cod are more sensitive or respond with less specificity to estrogenic chemicals than turbot. The relatively large degree of common responses in NP and BPA exposed cod may indicate that in cod BPA have similar mode of action as NP. Generally, the results show the potential of SELDI-TOF as a tool for comparing multiple

  8. Five different piscidins from Nile tilapia, Oreochromis niloticus: analysis of their expressions and biological functions.

    Directory of Open Access Journals (Sweden)

    Kuan-Chieh Peng

    Full Text Available Piscidins are antimicrobial peptides (AMPs that play important roles in helping fish resist pathogenic infections. Through comparisons of tilapia EST clones, the coding sequences of five piscidin-like AMPs (named TP1∼5 of Nile tilapia, Oreochromis niloticus, were determined. The complete piscidin coding sequences of TP1, -2, -3, -4, and -5 were respectively composed of 207, 234, 231, 270, and 195 bases, and each contained a translated region of 68, 77, 76, 89, and 64 amino acids. The tissue-specific, Vibrio vulnificus stimulation-specific, and Streptococcus agalactiae stimulation-specific expressions of TP2, -3, and -4 mRNA were determined by a comparative RT-PCR. Results of the tissue distribution analysis revealed high expression levels of TP2 mRNA in the skin, head kidneys, liver, and spleen. To study bacterial stimulation, S. agalactiae (SA47 was injected, and the TP4 transcript was upregulated by >13-fold (compared to the wild-type (WT control, without injection and was 60-fold upregulated (compared to the WT control, without injection 24 h after the S. agalactiae (SA47 injection in the spleen and gills. Synthesized TP3 and TP4 peptides showed antimicrobial activities against several bacteria in this study, while the synthesized TP1, -2, and -5 peptides did not. The synthesized TP2, -3, and -4 peptides showed hemolytic activities and synthesized TP3 and TP4 peptides inhibited tilapia ovary cell proliferation with a dose-dependent effect. In summary, the amphiphilic α-helical cationic peptides of TP3 and TP4 may represent novel and potential antimicrobial agents for further peptide drug development.

  9. Electrotransfer of the tilapia piscidin 3 and tilapia piscidin 4 genes into skeletal muscle enhances the antibacterial and immunomodulatory functions of Oreochromis niloticus.

    Science.gov (United States)

    Lin, Wen-Chun; Chang, Hsiao-Yun; Chen, Jyh-Yih

    2016-03-01

    Tilapia piscidin 3 (TP3) and tilapia piscidin 4 (TP4) are antimicrobial peptides recently isolated from Oreochromis niloticus. We previously showed that synthetic TP3 and TP4 possessed antimicrobial activities. Here, we analyzed the bactericidal abilities and immunomodulatory properties of these AMPs following the electroporation of pCMV-GFP-TP3 or pCMV-GFP-TP4 plasmid into tilapia (O. niloticus) muscle and subsequent infection with Vibrio vulnificus or Streptococcus agalactiae. Prior overexpression of TP3 or TP4 in tilapia muscle tissues efficiently reduced bacterial numbers at 24 and 48 h after V. vulnificus infection and reduced bacterial numbers at 24 h after S. agalactiae infection compared to numbers in controls expressing pCMV-GFP (EGFP). Electroporation of pCMV-EGFP-TP3 (TP3) or pCMV-EGFP-TP4 (TP4) significantly increased expression of several immune-related genes in muscle (IL-1β (12 h, TP3), IL-8 (12 h, TP3), TGFβ (3 h, TP4), and IκB (48 h, TP3, TP4)) and decreased the expression of TLR5 (12 h and 24 h, TP3) after V. vulnificus infection. Following S. agalactiae infection, expression of the following genes was significantly decreased in muscle: IL-1β (12 h, TP3), IL-8 (12 h, TP3, TP4), TLR5 (3 h-24 h, TP3, TP4), TGFβ (3 h, TP4; 24 h, TP3, TP4), and IκB (3 h, TP3). These data suggest that TP3 and TP4 exert antimicrobial effects after overexpression in the O. niloticus muscle, and also play important roles in the regulation of immune-related gene expression.

  10. Electrotransfer of the tilapia piscidin 3 and tilapia piscidin 4 genes into skeletal muscle enhances the antibacterial and immunomodulatory functions of Oreochromis niloticus.

    Science.gov (United States)

    Lin, Wen-Chun; Chang, Hsiao-Yun; Chen, Jyh-Yih

    2016-03-01

    Tilapia piscidin 3 (TP3) and tilapia piscidin 4 (TP4) are antimicrobial peptides recently isolated from Oreochromis niloticus. We previously showed that synthetic TP3 and TP4 possessed antimicrobial activities. Here, we analyzed the bactericidal abilities and immunomodulatory properties of these AMPs following the electroporation of pCMV-GFP-TP3 or pCMV-GFP-TP4 plasmid into tilapia (O. niloticus) muscle and subsequent infection with Vibrio vulnificus or Streptococcus agalactiae. Prior overexpression of TP3 or TP4 in tilapia muscle tissues efficiently reduced bacterial numbers at 24 and 48 h after V. vulnificus infection and reduced bacterial numbers at 24 h after S. agalactiae infection compared to numbers in controls expressing pCMV-GFP (EGFP). Electroporation of pCMV-EGFP-TP3 (TP3) or pCMV-EGFP-TP4 (TP4) significantly increased expression of several immune-related genes in muscle (IL-1β (12 h, TP3), IL-8 (12 h, TP3), TGFβ (3 h, TP4), and IκB (48 h, TP3, TP4)) and decreased the expression of TLR5 (12 h and 24 h, TP3) after V. vulnificus infection. Following S. agalactiae infection, expression of the following genes was significantly decreased in muscle: IL-1β (12 h, TP3), IL-8 (12 h, TP3, TP4), TLR5 (3 h-24 h, TP3, TP4), TGFβ (3 h, TP4; 24 h, TP3, TP4), and IκB (3 h, TP3). These data suggest that TP3 and TP4 exert antimicrobial effects after overexpression in the O. niloticus muscle, and also play important roles in the regulation of immune-related gene expression. PMID:26828260

  11. Rapid, economical single-nucleotide polymorphism and microsatellite discovery based on de novo assembly of a reduced representation genome in a non-model organism: a case study of Atlantic cod Gadus morhua.

    Science.gov (United States)

    Carlsson, J; Gauthier, D T; Carlsson, J E L; Coughlan, J P; Dillane, E; Fitzgerald, R D; Keating, U; McGinnity, P; Mirimin, L; Cross, T F

    2013-03-01

    By combining next-generation sequencing technology (454) and reduced representation library (RRL) construction, the rapid and economical isolation of over 25 000 potential single-nucleotide polymorphisms (SNP) and >6000 putative microsatellite loci from c. 2% of the genome of the non-model teleost, Atlantic cod Gadus morhua from the Celtic Sea, south of Ireland, was demonstrated. A small-scale validation of markers indicated that 80% (11 of 14) of SNP loci and 40% (6 of 15) of the microsatellite loci could be amplified and showed variability. The results clearly show that small-scale next-generation sequencing of RRL genomes is an economical and rapid approach for simultaneous SNP and microsatellite discovery that is applicable to any species. The low cost and relatively small investment in time allows for positive exploitation of ascertainment bias to design markers applicable to specific populations and study questions.

  12. Response of branchial Na(+)/K(+) ATPase to changes in ambient temperature in Atlantic cod (Gadus morhua) and whiting (Merlangius merlangus).

    Science.gov (United States)

    Michael, Katharina; Koschnick, Nils; Pörtner, Hans-O; Lucassen, Magnus

    2016-05-01

    The maintenance of ion and pH homeostasis despite changes in ambient temperature is crucial for ectothermic organisms. Thermal sensitivity of Na(+)/K(+) ATPase mRNA expression, protein expression and activity was determined in gills of North Sea cod (NC) and Northeastern Arctic cod (NEAC), acclimated for 6 weeks at 4 and 10 °C and compared to field samples of North Sea cod (sNC), acclimatized to early spring (4 °C) and summer (18 °C) conditions. The same analyses were conducted in gills of the confamiliar whiting, acclimated at 4 and 10 °C. Branchial Na(+)/K(+) ATPase capacities remained uncompensated at functional and protein levels in NC and NEAC at both acclimation temperatures. Na(+)/K(+) ATPase mRNA expression in NEAC acclimated at 10 °C was about twofold higher compared to NC, indicating some population-specific differentiation at this level. Lower Na(+)/K(+) ATPase capacities in gills of warm-acclimatized sNC at common assay temperatures indicate thermal compensation between seasonal extremes, and post-translational modifications contributed to this mitigation at high assay temperature. Together, cod compensates Na(+)/K(+) ATPase capacities on the warm edge of the thermal window and below 4 °C, respectively. In contrast, whiting Na(+)/K(+) ATPase capacities were cold compensated at 4 °C, supported by 1.5-fold higher mRNA and protein expression. Besides, capacities were lower in whiting compared to NC and NEAC at optimum temperature, which may be advantageous in terms of reduced maintenance cost, but at temperatures ≤4 °C, compensation may represent an energy trade-off to maintain homeostasis. The species-specific response of gadid Na(+)/K(+) ATPase indicates certain threshold temperatures beyond which compensation of the pump is elicited, possibly related to the different biogeography of these species.

  13. Climate induced temperature effects on growth performance, fecundity and recruitment in marine fish: developing a hypothesis for cause and effect relationships in Atlantic cod ( Gadus morhua) and common eelpout ( Zoarces viviparus)

    Science.gov (United States)

    Pörtner, H. O.; Berdal, B.; Blust, R.; Brix, O.; Colosimo, A.; De Wachter, B.; Giuliani, A.; Johansen, T.; Fischer, T.; Knust, R.; Lannig, G.; Naevdal, G.; Nedenes, A.; Nyhammer, G.; Sartoris, F. J.; Serendero, I.; Sirabella, P.; Thorkildsen, S.; Zakhartsev, M.

    2001-12-01

    Effects of global warming on animal distribution and performance become visible in many marine ecosystems. The present study was designed to develop a concept for a cause and effect understanding with respect to temperature changes and to explain ecological findings based on physiological processes. The concept is based on a wide comparison of invertebrate and fish species with a special focus on recent data obtained in two model species of fish. These fish species are both characterized by northern and southern distribution limits in the North Atlantic: eelpout ( Zoarces viviparus), as a typical non-migrating inhabitant of the coastal zone and the cod ( Gadus morhua), as a typical inhabitant of the continental shelf with a high importance for fisheries. Mathematical modelling demonstrates a clear significant correlation between climate induced temperature fluctuations and the recruitment of cod stocks. Growth performance in cod is optimal at temperatures close to 10°C, regardless of the population investigated in a latitudinal cline. However, temperature specific growth rates decrease at higher latitudes. Also, fecundity is less in White Sea than in North and Baltic Sea cod or eelpout populations. These findings suggest that a cold-induced shift in energy budget occurs which is unfavorable for growth performance and fecundity. Thermal tolerance limits shift depending on latitude and are characterized by oxygen limitation at both low or high temperatures. Oxygen supply to tissues is optimized at low temperature by a shift in hemoglobin isoforms and oxygen binding properties to lower affinities and higher unloading potential. Protective stimulation of heat shock protein synthesis was not observed. According to a recent model of thermal tolerance the downward shift of tolerance limits during cold adaptation is associated with rising mitochondrial densities and, thus, aerobic capacity and performance in the cold, especially in eurythermal species. At the same time

  14. Cod Liver Oil

    Science.gov (United States)

    Cod liver oil can be obtained from eating fresh cod liver or by taking supplements. Cod liver oil is used for high cholesterol, high triglycerides, ... ear infections (otitis media). Some people put cod liver oil on their skin to speed wound healing. ...

  15. A nuclear DNA basis for shelf- and bank scale population structure in northwest Atlantic cod ( Gadus morhua ) : Labrador to Georges Bank

    DEFF Research Database (Denmark)

    Ruzzante, D.E.; Taggart, C.T.; Cook, D.

    1998-01-01

    -ST measures of population structure, differences are revealed among populations at continental shelf scales (NE Newfoundland Shelf, Grand Banks, Flemish Cap, Scotian Shelf, Georges Bank) where regions are separated by submarine saddles, channels and trenches. However, we also provide evidence of genetic...... structure at spawning-bank scales consistent with variation in oceanographic features and in the spatiotemporal distribution of spawning, each of which may represent barriers to gene flow among geographically contiguous populations inhabiting a highly advective environment. The differences described...... are consistent with postdispersal spawning fidelity to natal areas,a behaviour that may be facilitated by topographically induced gyre-like circulations that can act as retention mechanisms. Significant degrees of substructure among neighbouring and contiguous cod populations may be most easily explained...

  16. Understanding climate impacts on recruitment and spatial dynamics of Atlantic cod in the Gulf of Maine: Integration of observations and modeling

    Science.gov (United States)

    Runge, Jeffrey A.; Kovach, Adrienne I.; Churchill, James H.; Kerr, Lisa A.; Morrison, John R.; Beardsley, Robert C.; Berlinsky, David L.; Chen, Changsheng; Cadrin, Steven X.; Davis, Cabell S.; Ford, Kathryn H.; Grabowski, Jonathan H.; Howell, W. Huntting; Ji, Rubao; Jones, Rebecca J.; Pershing, Andrew J.; Record, Nicholas R.; Thomas, Andrew C.; Sherwood, Graham D.; Tallack, Shelly M. L.; Townsend, David W.

    2010-10-01

    We put forward a combined observing and modeling strategy for evaluating effects of environmental forcing on the dynamics of spatially structured cod populations spawning in the western Gulf of Maine. Recent work indicates at least two genetically differentiated complexes in this region: a late spring spawning, coastal population centered in Ipswich Bay, and a population that spawns in winter inshore and on nearshore banks in the Gulf of Maine and off southern New England. The two populations likely differ in trophic interactions and in physiological and behavioral responses to different winter and spring environments. Coupled physical-biological modeling has advanced to the point where within-decade forecasting of environmental conditions for recruitment to each of the two populations is feasible. However, the modeling needs to be supported by hydrographic, primary production and zooplankton data collected by buoys, and by data from remote sensing and fixed station sampling. Forecasts of environmentally driven dispersal and growth of planktonic early life stages, combined with an understanding of possible population-specific predator fields, usage of coastal habitat by juveniles and adult resident and migratory patterns, can be used to develop scenarios for spatially explicit population responses to multiple forcings, including climate change, anthropogenic impacts on nearshore juvenile habitat, connectivity among populations and management interventions such as regional fisheries closures.

  17. New England Cod Collapse and the Climate

    Science.gov (United States)

    Meng, Kyle C.; Oremus, Kimberly L.; Gaines, Steven D.

    2016-01-01

    To improve fishery management, there is an increasing need to understand the long-term consequences of natural and anthropogenic climate variability for ecological systems. New England’s iconic cod populations have been in decline for several decades and have recently reached unprecedented lows. We find that 17% of the overall decline in Gulf of Maine cod biomass since 1980 can be attributed to positive phases of the North Atlantic Oscillation (NAO). This is a consequence of three results: i) a 1-unit increase in the NAO winter index is associated with a 17% decrease in the spring biomass of age-1 cod the following year; ii) this NAO-driven decrease persists as the affected cohort matures; iii) fishing practices appear to exacerbate NAO’s direct biological effect such that, since 1913, a 1-unit increase in the NAO index lowers subsequent cod catch for up to 19 years. The Georges Bank cod stock displays similar patterns. Because we statistically detect a delay between the NAO and subsequent declines in adult biomass, our findings imply that observed current NAO conditions can be used in stock forecasts, providing lead time for adaptive policy. More broadly, our approach can inform forecasting efforts for other fish populations strongly affected by natural and anthropogenic climatic variation. PMID:27463967

  18. Transport of North Sea cod larvae into the Skagerrak coastal populations.

    OpenAIRE

    Knutsen, Halvor; André, Carl; Jorde, Per Erik; Skogen, Morten D.; Thuróczy, Emma; Stenseth, Nils Chr.

    2004-01-01

    The Atlantic cod (Gadus morhua) is economically one of the world's most important marine species--a species presently suffering from heavy overexploitation throughout its range of distribution. Although not fully understood, the Atlantic cod is believed to be structured into populations in a rather complex manner, whereby both highly migratory and more confined ocean-spawning stocks coexist with stationary coastal populations. Owing to the complex population structure, little is presently kno...

  19. Feeding opportunities of larval and juvenile cod (Gadus morhua) in a Greenlandic fjord: temporal and spatial linkages between cod and their preferred prey

    DEFF Research Database (Denmark)

    Swalethorp, Rasmus; Kjellerup, Sanne; Malanski, Evandro;

    2014-01-01

    preferences of the early-life stages of Atlantic cod (Gadus morhua) to quantify the availability of prey during a spring-summer season in a West Greenlandic fjord. We hypothesized that abundances of larval and juvenile cod at size were synchronized to optimal availability of preferred prey in space and time....... The present analysis is based on nine cruises each covering 5 stations visited between 24 May and 5 August 2010 comparing zooplankton abundance, cod gut content and distribution patterns. Cod 4–25 mm in length preferred prey of about 5 % of their own length. During ontogeny, their preferences changed from...

  20. “Specificity Determinants” Improve Therapeutic Indices of Two Antimicrobial Peptides Piscidin 1 and Dermaseptin S4 Against the Gram-negative Pathogens Acinetobacter baumannii and Pseudomonas aeruginosa

    Directory of Open Access Journals (Sweden)

    Ziqing Jiang

    2014-03-01

    Full Text Available A new class of antimicrobial agents with lower rates of resistance and different targets is urgently needed because of the rapidly increasing resistance to classical antibiotics. Amphipathic cationic α-helical antimicrobial peptides (AMPs represent such a class of compounds. In our previous studies, using a 26-residue de novo designed antimicrobial peptide, we proposed the concept of “specificity determinant(s”: positively charged residue(s in the center of the non-polar face of AMPs that could decrease hemolytic activity/toxicity but increase or maintain the same level of antimicrobial activity to increase dramatically the therapeutic index. In the current study, we used d-enantiomers of two AMPs, Piscidin 1 isolated from fish and dermaseptin S4 isolated from frog. We substituted different positions in the center of the hydrophobic face with one or two lysine residue(s (one or two “specificity determinant(s”. This simple modification not only maintained or improved antimicrobial activity against Gram-negative pathogens Acinetobacter baumannii (11 strains and Pseudomonas aeruginosa (6 strains, but also dramatically decreased hemolytic activity of human red blood cells, as predicted. Therapeutic indices improved by 55-fold and 730-fold for piscidin 1 (I9K and dermaseptin S4 (L7K, A14K, respectively, against A. baumannii. Similarly, the therapeutic indices improved 32-fold and 980-fold for piscidin 1 (I9K and dermaseptin S4 (L7K, A14K, respectively, against P. aeruginosa.

  1. Cod reproductive ecology

    DEFF Research Database (Denmark)

    Røjbek, Maria

    In recent decades, Baltic cod has experienced a period of low recruitment. In the same period the pelagic Baltic Sea ecosystem experienced a regime shift, due to hydrographic changes, affecting all trophic levels. The rationale for the thesis is built on the hypothesis that the regime shift has r...

  2. Retention of Coastal Cod Eggs in a Fjord Caused by Interactions between Egg Buoyancy and Circulation Pattern

    OpenAIRE

    Myksvoll, Mari Skuggedal; Sundby, Svein; Ådlandsvik, Bjørn; Frode B Vikebø

    2011-01-01

    Norwegian coastal cod form a stationary population of Atlantic cod Gadus morhua consisting of several genetically separated subpopulations. A small-scale differentiation in marine populations with pelagic eggs and larvae is made possible by local retention of early life stages in coastal environments. A numerical model was used to simulate the circulation in a fjord system in northern Norway over 2 years with different river runoff patterns. The dispersal of cod eggs was calculated with a par...

  3. Tilapia Piscidin 4 (TP4 Stimulates Cell Proliferation and Wound Closure in MRSA-Infected Wounds in Mice

    Directory of Open Access Journals (Sweden)

    Hang-Ning Huang

    2015-05-01

    Full Text Available Antimicrobial peptides (AMPs are endogenous antibiotics that directly affect microorganisms, and also have a variety of receptor-mediated functions. One such AMP, Tilapia piscidin 4 (TP4, was isolated from Nile tilapia (Oreochromis niloticus; TP4 has antibacterial effects and regulates the innate immune system. The aim of the present study was to characterize the role of TP4 in the regulation of wound closure in mice and proliferation of a keratinocyte cell line (HaCaT and fibroblast cell line (Hs-68. In vitro, TP4 stimulated cell proliferation and activated collagen I, collagen III, and keratinocyte growth factor (KGF gene expression in Hs-68 cells, which induces keratin production by HaCaT cells. This effect was detectable at TP4 concentrations of 6.25 µg/mL in both cell lines. In vivo, TP4 was found to be highly effective at combating peritonitis and wound infection caused by MRSA in mouse models, without inducing adverse behavioral effects or liver or kidney toxicity. Taken together, our results indicate that TP4 enhances the survival rate of mice infected with the bacterial pathogen MRSA through both antimicrobial and wound closure activities mediated by epidermal growth factor (EGF, transforming growth factor (TGF, and vascular endothelial growth factor (VEGF. The peptide is likely involved in antibacterial processes and regulation of tissue homeostasis in infected wounds in mice. Overall, these results suggest that TP4 may be suitable for development as a novel topical agent for wound dressing.

  4. Cheating about the cod

    OpenAIRE

    Hannesson, Rögnvaldur

    2006-01-01

    The Northeast Arctic cod is managed by a total quota shared evenly between Norway and Russia. It appears that Russia has been overfishing its quota by substantial amounts for a number of years, due to insufficient monitoring of fishing vessels. This paper considers what would be the best reply by Norway to given levels of Russian overfishing. It is found that in most cases the best Norwegian reply would be also to overfish its quota. An aggregate biomass model with stochastic growth and recru...

  5. Regime shifts, resilience and recovery of a cod stock

    DEFF Research Database (Denmark)

    Lindegren, Martin; Diekmann, Rabea; Möllmann, Christian

    2010-01-01

    In the North and Baltic seas Atlantic cod Gadus morhua stocks collapsed as part or one of the major factors inducing large-scale ecosystem regime shifts. Determining the relative contribution of overfishing and climate variability in causing these shifts has proven difficult. While facing similar...... of the local cod stock to environmental change. The recovery and healthy condition of the Sound cod stock illustrate the need for adaptive marine management strategies that maximize ecosystem resilience....... and development of the Sound ecosystem, specifically testing for the occurrence of regime shifts and their potential drivers. By comparing the ecosystem development of the Sound with the neighbouring North and Baltic seas, we were able to demonstrate the positive effect of the trawl fishing ban on the resilience......In the North and Baltic seas Atlantic cod Gadus morhua stocks collapsed as part or one of the major factors inducing large-scale ecosystem regime shifts. Determining the relative contribution of overfishing and climate variability in causing these shifts has proven difficult. While facing similar...

  6. Infection of North Sea cod (Gadus morhua L.) postlarvae and juveniles with the parasites Hysterothylacium aduncum Rudolphi and Caligus sp

    DEFF Research Database (Denmark)

    Mehrdana, F.; Bahlool, Q. M.; Skovgaard, A.;

    Parasitic infections of individual juvenile and adult Atlantic cod (Gadus morhua L.) have been well studied for decades, but infections of early life stages and the impact of parasitism on population level have been less well elucidated. It is generally assumed that early developmental stages...... of fish are more vulnerable to infection compared to older age groups, but merely few investigations on parasitic infections in young cod are available. We have therefore performed a parasitological investigation of a total of 3361 specimens of Atlantic cod post larvae and juveniles sampled from the North...

  7. The ecological and evolutionary effects of harvesting Northeast Arctic cod - Insights from economics and implications for management

    OpenAIRE

    2010-01-01

    List of papers. Papers I - V are removed from the thesis due to copyright restrictions. Paper I: Destabilized population growth rate in Northeast Arctic cod. Anne Maria Eikeset, Dag Øystein Hjermann, Christian Brinch and Nils Chr. Stenseth Manuscript. Paper II: Is evolution needed to explain historical maturation trends in Northeast Atlantic cod? Anne Maria Eikeset, Erin S. Dunlop, Mikko Heino, Nils Chr. Stenseth and Ulf Dieckmann Manuscript. Paper III: The economic re...

  8. Sensory characteristics of different cod products

    DEFF Research Database (Denmark)

    Sveinsdottir, K.; Martinsdottir, E.; Hyldig, Grethe;

    2010-01-01

    Sensory characteristics of cod products available to consumers were analyzed, and different ways to analyze sensory results were viewed. Ten cod samples of different origin (wild and farmed cod), storage time (short and extended) and storage method (stored fresh, frozen or packed in modified...... the products, and principal component analysis provided an overview of the differences and similarities between the products with regard to sensory characteristics. Farmed cod had different sensory characteristics compared with wild cod, such as more meat flavor, and rubbery and meaty texture. Different...... to be more applicable for studying results of extensive data sets by handling missing values and estimating the significance of sensory attributes. The practical use of the paper is also a quantitative descriptive analysis vocabulary, which may be used as a basis for other studies with cod. It may also...

  9. Cloning of antimicrobial piscidin-like peptide and prokaryotic expressionof the putative mature peptide in Epinephelus fuscoguttatus%棕点石斑鱼Piscidin样肽基因的克隆及其成熟肽的原核表达

    Institute of Scientific and Technical Information of China (English)

    陈大玮; 邓利; 何凡; 邱聪龄; 马一见; 刘志刚

    2011-01-01

    A 388bp cDNA sequence with complete open reading frame was amplified by RT-PCR with degenerate primers from leucocytes of Epinephelus fuscoguttatus, an important commercial marine fish species. Blast analysis preliminarily suggested that the obtained sequence, which was named as Epinephelus fuscoguttatus piscidin-like peptide (GU592793), is a member of fish antimicrobial peptide piscidin family. The deduced amino acid sequence was found to have the common features for defining the fish piscidin, including: (1) signal peptide sequence had 60%~95//6 similarity to oth er piscidins; (2) six amino acid residues in N-terminal part of the putative mature peptide are rich in I soleucine, phenylalanine, and histidine; (3) the amino acid residues both at position 8 and 13 of the mature peptide are glycines. The phylogenetic neighbor-joining tree showed that the present sequence cluster within the clade of piscidin-like peptide of Epinephelus akaara and Epinephelus coioides (ACE78290, ACE78291) with 81% bootstrap support. Accordingly, the first piscidin precursor cD-NA from Epinephelus fuscoguttatus was amplified and reported here. The present putative mature peptide is an amphiphilic and cationic peptide with the calculated isoelectric points of 12. 48. A Schiffer-Edmunson plot suggested the peptide had the potential to form an amphipathic orhelix. The prokaryotic fusion expression vector of predicted mature peptide (pET-32a-pis(EF)) was constructed and expressed in E. Coli Origami (DE3). The fusion protein containing the present mature peptide was efficiently expressed in the form of inclusion body after lmmol/ml IPTG induction at 30 ℃ for 4h. KEY WORDS Antimicrobial peptide Piscidin Molecular cloning%以简并引物通过RT-PCR从重要经济海水鱼类棕点石斑鱼Epinephelus uscoguttatus白细胞中扩增出一条388bp具有完整编码框的cDNA序列.Blast分析初步显示,该序列属于鱼类抗菌肽Piscidin家族的一员,将其命

  10. Honey, I cooled the cods: Modelling the effect of temperature on the structure of Boreal/Arctic fish ecosystems

    NARCIS (Netherlands)

    Pope, J.G.; Falk-Pedersen, J.; Jennings, S.; Rice, J.C.; Gislason, H.; Daan, N.

    2009-01-01

    Historically colder regions of the North Atlantic had fisheries dominated by only a few fish species; principally cod and capelin. Possible population dynamic mechanisms that lead to such dominance are investigated by considering how a charmingly simple published multispecies model of the North Sea

  11. Cod Gadus morhua and climate change: processes, productivity and prediction

    DEFF Research Database (Denmark)

    Brander, Keith

    2010-01-01

    the causes. Investigation of cod Gadus morhua populations across the whole North Atlantic Ocean has shown large-scale patterns of change in productivity due to lower individual growth and condition, caused by large-scale climate forcing. If a population is being heavily exploited then a drop in productivity......Environmental factors act on individual fishes directly and indirectly. The direct effects on rates and behaviour can be studied experimentally and in the field, particularly with the advent of ever smarter tags for tracking fishes and their environment. Indirect effects due to changes in food......, predators, parasites and diseases are much more difficult to estimate and predict. Climate can affect all life-history stages through direct and indirect processes and although the consequences in terms of growth, survival and reproductive output can be monitored, it is often difficult to determine...

  12. AFSC/REFM: Pacific cod Localized Depletion Study

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Data from Localized Depletion study for Pacific cod 2001-2005. Study was conducted using cod pot gear to measure localized abundance of Pacific cod inside and...

  13. Alternative adaptive immunity strategies: coelacanth, cod and shark immunity.

    Science.gov (United States)

    Buonocore, Francesco; Gerdol, Marco

    2016-01-01

    The advent of high throughput sequencing has permitted to investigate the genome and the transcriptome of novel non-model species with unprecedented depth. This technological advance provided a better understanding of the evolution of adaptive immune genes in gnathostomes, revealing several unexpected features in different fish species which are of particular interest. In the present paper, we review the current understanding of the adaptive immune system of the coelacanth, the elephant shark and the Atlantic cod. The study of coelacanth, the only living extant of the long thought to be extinct Sarcopterygian lineage, is fundamental to bring new insights on the evolution of the immune system in higher vertebrates. Surprisingly, coelacanths are the only known jawed vertebrates to lack IgM, whereas two IgD/W loci are present. Cartilaginous fish are of great interest due to their basal position in the vertebrate tree of life; the genome of the elephant shark revealed the lack of several important immune genes related to T cell functions, which suggest the existence of a primordial set of TH1-like cells. Finally, the Atlantic cod lacks a functional major histocompatibility II complex, but balances this evolutionary loss with the expansion of specific gene families, including MHC I, Toll-like receptors and antimicrobial peptides. Overall, these data point out that several fish species present an unconventional adaptive immune system, but the loss of important immune genes is balanced by adaptive evolutionary strategies which still guarantee the establishment of an efficient immune response against the pathogens they have to fight during their life.

  14. Species Profiles: Life Histories and Environmental Requirements of Coastal Fishes and Invertebrates (Mid-Atlantic): Bay anchovy

    OpenAIRE

    Morton, Timothy

    1989-01-01

    The bay anchovy occurs along the Atlantic and Gulf of Mexico coasts, from Cape Cod, Massachusetts, to Yucatan, Mexico (Hildebrand 1963), except for the Florida Keys where it is apparently absent (Daly 1970). (PDF contains 22 pages)

  15. Fish stories: cod, oil and gas turn about to be hard to mix

    International Nuclear Information System (INIS)

    In 1992 the Government of Canada gave the green light for the start of construction of the Hibernia oil platform; in the same year moratorium on cod fishing was declared. Hibernia ushered in a new era of growth in Atlantic Canada, the moratorium put an end to cod exports for a period of seven years. Environmental activist believe that the two events are not unrelated; after-effects of the Hibernia development played a role in reducing fish stocks and likely to inhibit their recovery. The environmental group 'Save our Seas and Shores' (SOSS) claims that seismic work and drilling are likely to interfere with the migration patterns of young cod, forcing them to spawn in areas that are not safe for egg maturity. According to SOSS, the future of cod fishing is in danger of destruction by further exploration and development in spawning nursery and migratory areas. The group is claiming support from a Nova Scotia government review of two marine ecosystems both of which were declared too delicate to withstand the effects of oil and gas activity. SOSS, supported by a coalition of fishery, native, environmental and tourism groups is determined to halt petroleum exploration along the western coast of Cape Breton Island. In the meantime, the Atlantic Petroleum Institute, first opened in Nova Scotia, and now in the process of expanding into Newfoundland, supported by industry and the Canada Atlantic Opportunities Council, has been assured of funding for a period of five years to develop education and training programs, organize forums for discussion, debate and problem solving, and coordinate research and development. The Institute hopes that SOSS will want to participate in finding solutions to the problems of fisheries that are acceptable to both petroleum and fishing industry interests

  16. EAARL Topography-Cape Cod National Seashore

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Elevation maps (also known as Digital Elevation Models or DEMs) of Cape Cod National Seashore were produced from remotely-sensed, geographically-referenced...

  17. Who’s your mama? Riverine hybridisation of threatened freshwater Trout Cod and Murray Cod

    Science.gov (United States)

    Unmack, Peter J.; Dyer, Fiona J.; Lintermans, Mark

    2016-01-01

    Rates of hybridization and introgression are increasing dramatically worldwide because of translocations, restocking of organisms and habitat modifications; thus, determining whether hybridization is occuring after reintroducing extirpated congeneric species is commensurately important for conservation. Restocking programs are sometimes criticized because of the genetic consequences of hatchery-bred fish breeding with wild populations. These concerns are important to conservation restocking programs, including those from the Australian freshwater fish family, Percichthyidae. Two of the better known Australian Percichthyidae are the Murray Cod, Maccullochella peelii and Trout Cod, Maccullochella macquariensis which were formerly widespread over the Murray Darling Basin. In much of the Murrumbidgee River, Trout Cod and Murray Cod were sympatric until the late 1970s when Trout Cod were extirpated. Here we use genetic single nucleotide polymorphism (SNP) data together with mitochondrial sequences to examine hybridization and introgression between Murray Cod and Trout Cod in the upper Murrumbidgee River and consider implications for restocking programs. We have confirmed restocked riverine Trout Cod reproducing, but only as inter-specific matings, in the wild. We detected hybrid Trout Cod–Murray Cod in the Upper Murrumbidgee, recording the first hybrid larvae in the wild. Although hybrid larvae, juveniles and adults have been recorded in hatcheries and impoundments, and hybrid adults have been recorded in rivers previously, this is the first time fertile F1 have been recorded in a wild riverine population. The F1 backcrosses with Murray cod have also been found to be fertile. All backcrosses noted were with pure Murray Cod. Such introgression has not been recorded previously in these two species, and the imbalance in hybridization direction may have important implications for restocking programs.

  18. CHARACTERIZATION OF WESTERN NORTH ATLANTIC RIGHT WHALE SPRING FEEDING HABITAT

    Science.gov (United States)

    The Great South Channel region of the southwestern Gulf of Maine, between George's Bank and Cape Cod, is the primary spring feeding ground for the western North Atlantic population of the I northern right whale, E. glacialis .Since this whale is so endangered, it is critical to i...

  19. Walking the cod: an investigation into the relative robustness of cod, Gadus morhua, skeletal elements

    Directory of Open Access Journals (Sweden)

    Andrew K.G. Jones

    1999-12-01

    Full Text Available A simple experiment is described which details what happens to the bones of cod when they are walked on by a man. The pattern of fragmentation for various elements is illustrated and an index of robustness proposed for those elements in a cod skeleton most frequently recovered from archaeological sites.

  20. Annual and spatial variability in endo- and ectoparasite infections of North Sea cod (Gadus morhua Linnaeus, 1758) larvae, post-larvae and juveniles

    DEFF Research Database (Denmark)

    Mehrdana, Foojan; Bahlool, Qusay Z. M.; Skovgaard, Alf;

    2014-01-01

    A parasitological investigation was performed on a total of 5380 Atlantic cod larvae, post-larvae and small juveniles sampled from the North Sea during a period of five years. The copepod Caligus elongatus (Von Nordmann, 1832) and the nematode Hysterothylacium aduncum (Rudolphi, 1802) were found...

  1. Slow adaptation in the face of rapid warming leads to collapse of the Gulf of Maine cod fishery.

    Science.gov (United States)

    Pershing, Andrew J; Alexander, Michael A; Hernandez, Christina M; Kerr, Lisa A; Le Bris, Arnault; Mills, Katherine E; Nye, Janet A; Record, Nicholas R; Scannell, Hillary A; Scott, James D; Sherwood, Graham D; Thomas, Andrew C

    2015-11-13

    Several studies have documented fish populations changing in response to long-term warming. Over the past decade, sea surface temperatures in the Gulf of Maine increased faster than 99% of the global ocean. The warming, which was related to a northward shift in the Gulf Stream and to changes in the Atlantic Multidecadal Oscillation and Pacific Decadal Oscillation, led to reduced recruitment and increased mortality in the region's Atlantic cod (Gadus morhua) stock. Failure to recognize the impact of warming on cod contributed to overfishing. Recovery of this fishery depends on sound management, but the size of the stock depends on future temperature conditions. The experience in the Gulf of Maine highlights the need to incorporate environmental factors into resource management.

  2. Slow adaptation in the face of rapid warming leads to collapse of the Gulf of Maine cod fishery.

    Science.gov (United States)

    Pershing, Andrew J; Alexander, Michael A; Hernandez, Christina M; Kerr, Lisa A; Le Bris, Arnault; Mills, Katherine E; Nye, Janet A; Record, Nicholas R; Scannell, Hillary A; Scott, James D; Sherwood, Graham D; Thomas, Andrew C

    2015-11-13

    Several studies have documented fish populations changing in response to long-term warming. Over the past decade, sea surface temperatures in the Gulf of Maine increased faster than 99% of the global ocean. The warming, which was related to a northward shift in the Gulf Stream and to changes in the Atlantic Multidecadal Oscillation and Pacific Decadal Oscillation, led to reduced recruitment and increased mortality in the region's Atlantic cod (Gadus morhua) stock. Failure to recognize the impact of warming on cod contributed to overfishing. Recovery of this fishery depends on sound management, but the size of the stock depends on future temperature conditions. The experience in the Gulf of Maine highlights the need to incorporate environmental factors into resource management. PMID:26516197

  3. An Oscillating Jet in the Cape Cod Bay

    Science.gov (United States)

    Poulin, F. J.; Flierl, G. R.

    2004-05-01

    During the spring months, the Cape Cod Bay is a roaming ground for the North Atlantic right whale, perhaps the most endangered whale species in the world. The whales are observed to travel along the topographic steps that run parallel to the shore, eating plankton patches that form in the coastal water. In this region, off the coast of Provincetown, there is an oscillatory current with the same period as that of the ambient tides. The location of the current and its periodicity suggest that the topography and tides play fundamental roles in generating the jet. This current, depending on its velocity profile, may become unstable and generate vortices. It is likely that the local surface convergences and divergences in the tidal flows and vortices are related to the aggregation of the copepods (Calanus Finmarchicus), which are the right whale's primary food source. Understanding the dynamics of this jet is essential to predicting the spatial and temporal patterns of the codepods, which will in turn help us understand the likely locations and feeding history of the whales. In this talk we discuss results of the first phase of this study, that of the oscillatory jet in the Cape Cod Bay. This jet is rather complicated since it involves complex topography and coastlines, bottom and lateral friction, stratification and numerous other effects. Rather than study this system in fine detail, we investigate an idealized model that captures the essential features. In the context of this model, we first compute possible profiles for the oscillating jet. We then solve the linear stability problem to determine how the growth rates depend on the various parameters. Finally, and most importantly, we study the nonlinear problem to observe the time evolution of the instability process along with its equilibration. This provides some insight into how the instabilities are related to fluid transport across the shelf.

  4. Comment on "Slow adaptation in the face of rapid warming leads to collapse of the Gulf of Maine cod fishery".

    Science.gov (United States)

    Palmer, Michael C; Deroba, Jonathan J; Legault, Christopher M; Brooks, Elizabeth N

    2016-04-22

    Pershing et al (Reports, 13 November, p. 809) concluded that failure to account for temperature in the assessment and management of Gulf of Maine Atlantic cod caused overfishing. We argue that the "extra mortality" calculation driving this conclusion is an artifact. Environmental factors affect all stocks, but attribution of additional mortality to temperature alone by Pershing et al is unsupported by the data. PMID:27102473

  5. Restricted fish feeding reduces cod otolith opacity

    DEFF Research Database (Denmark)

    Høie, H.; Folkvord, A.; Mosegaard, Henrik;

    2008-01-01

    The purpose of this work was to examine the effect of reduced feeding and constant temperature on cod otolith opacity. Three groups of juvenile cod were given restricted food rations at different times for 4 months, resulting in depressed somatic growth. Otolith opacity was measured on pictures...... in otolith opacity were found between individual fish both within groups and between groups. In two of the three groups significantly more translucent otolith material was deposited in response to reduced feeding. Our results show that variations in feeding and hence fish growth resulted in variation...

  6. The influence of the ratio of protein energy to total energy in the feed on the activity of protein synthesis in vitro, the level of ribosomal RNA and the RNA-DNA ratio in white trunk muscle of Atlantic cod (Gadus morhua).

    Science.gov (United States)

    Lied, E; Rosenlund, G

    1984-01-01

    Cod (Gadus morhua) were fed diets containing protein energy to total energy levels (PE/TE) of 10.0, 20.6, 29.6, 38.4, 56.2 and 74.1% for 21 days. Ribosomes were isolated from the white trunk muscle tissue, the capacity for protein synthesis in vitro determined and related to muscle tissue wet weight rRNA and DNA. Protein concentrations of less than 47.4% PE/TE in the diets reduce the ribosomal capacity for protein synthesis per g wet weight and per mg DNA, and the tissue contents of rRNA and ratio of rRNA/DNA. The capacity for muscle protein synthesis in vitro is a significant and sensitive parameter of protein inadequacy in fish diets.

  7. H2O2_COD_EPA; MEC_acclimation

    Data.gov (United States)

    U.S. Environmental Protection Agency — H2O2_COD_EPA: Measurements of hydrogen peroxide and COD concentrations for water samples from the MEC reactors. MEC_acclimation: raw data for current and voltage of...

  8. Selective haddock (Melanogrammus aeglefinus) trawling: Avoiding cod (Gadus morhua) bycatch

    DEFF Research Database (Denmark)

    Krag, Ludvig Ahm; Holst, René; Madsen, Niels;

    2010-01-01

    The critical condition of the North Sea cod stocks has resulted in restrictions on not only cod, but also haddock and other species that are caught together with cod. Thus full exploitation of the haddock stock is unachievable unless cod can be excluded from the haddock catch. We designed a selec...... dependent: smaller cod escaped the trawl in greater numbers than did larger individuals. Whiting, saithe. lemon sole, and plaice were included in the analysis. (C) 2009 Elsevier B.V. All rights reserved....

  9. Particulate COD balance of particulate cod in eletrocuagulation/flotation reactor treating tannery effluent

    Directory of Open Access Journals (Sweden)

    Rodrigo Babora Borri

    2012-04-01

    Full Text Available Mass balance or particulate organic matter was studied in terms of COD, by means of electrocoagulation/flotation (ECF reactor treating tannery effluent. Reactor was operated in fill and draw (batch mode. Operating in hydraulic residence time of 65 minutes, ECF reactor reached 55 % COD removal. Although volatile solids were also removed from liquid phase (removal of 40%, fixed solids concentration, and hence total solids concentration, showed to be higher in withdrawn effluent than in ECF’s influent. This was assigned to NaCl added in order to enhance conductivity in wastewater.

  10. Dangerous dining: surface foraging of North Atlantic right whales increases risk of vessel collisions

    OpenAIRE

    Susan E Parks; Warren, Joseph D.; Stamieszkin, Karen; Mayo, Charles A.; Wiley, David

    2011-01-01

    North Atlantic right whales are critically endangered and, despite international protection from whaling, significant numbers die from collisions with ships. Large groups of right whales migrate to the coastal waters of New England during the late winter and early spring to feed in an area with large numbers of vessels. North Atlantic right whales have the largest per capita record of vessel strikes of any large whale population in the world. Right whale feeding behaviour in Cape Cod Bay (CCB...

  11. 1H NMR metabolic profiling of cod (Gadus morhua larvae: potential effects of temperature and diet composition during early developmental stages

    Directory of Open Access Journals (Sweden)

    Matilde Skogen Chauton

    2015-12-01

    Full Text Available Marine aquaculture offers a great source of protein for the increasing human population, and farming of, for example, Atlantic salmon is a global industry. Atlantic cod farming however, is an example of a promising industry where the potential is not yet realized. Research has revealed that a major bottleneck to successful farming of cod is poor quality of the larvae and juveniles. A large research program was designed to increase our understanding of how environmental factors such as temperature and nutrition affects cod larvae development. Data on larvae growth and development were used together with nuclear magnetic resonance. The NMR data indicated that the temperature influenced the metabolome of the larvae; differences were related to osmolytes such as betaine/TMAO, the amino acid taurine, and creatine and lactate which reflect muscle activity. The larvae were fed Artemia from stage 2, and this was probably reflected in a high taurine content of older larvae. Larvae fed with copepods in the nutrition experiment also displayed a high taurine content, together with higher creatine and betaine/TMAO content. Data on the cod larvae metabolome should be coupled to data on gene expression, in order to identify events which are regulated on the genetic level versus regulation resulting from temperature or nutrition during development, to fully understand how the environment affects larval development.

  12. Comment on “Slow adaptation in the face of rapid warming leads to collapse of the Gulf of Maine cod fishery”

    Science.gov (United States)

    Palmer, Michael C.; Deroba, Jonathan J.; Legault, Christopher M.; Brooks, Elizabeth N.

    2016-04-01

    Pershing et al. (Reports, 13 November, p. 809) concluded that failure to account for temperature in the assessment and management of Gulf of Maine Atlantic cod caused overfishing. We argue that the “extra mortality” calculation driving this conclusion is an artifact. Environmental factors affect all stocks, but attribution of additional mortality to temperature alone by Pershing et al. is unsupported by the data.

  13. A sensometric approach to cod-quality measurement

    DEFF Research Database (Denmark)

    Jensen, H.S.; Jørgensen, Bo

    1997-01-01

    The quality index method was used for describing the sensory quality of thawed whole cod and raw fillet and the quality of boiled fillet was assessed by profiling analysis. These data were compared to the water holding capacity of the minced cod by principal component analysis (PCA) and partial...

  14. Rationale for restocking the Eastern Baltic cod stock

    DEFF Research Database (Denmark)

    Støttrup, Josianne; Overton, Julia Lynne; Paulsen, Helge;

    2008-01-01

    The Danish Institute for Fisheries Research and Bornholm's Salmon Hatchery examined the potential for restocking Baltic cod (Gadus morhua callarias L.) in the eastern Baltic Sea. This cod population has adapted to the unique brackish water conditions where successful spawning depends on regular i...

  15. 78 FR 32612 - Collect on Delivery (COD)-Service Features

    Science.gov (United States)

    2013-05-31

    ... From the Federal Register Online via the Government Publishing Office POSTAL SERVICE 39 CFR Part 111 Collect on Delivery (COD)--Service Features AGENCY: Postal Service\\TM\\. ACTION: Proposed rule... collect on delivery (COD) service to mail an article for which the mailer has not been paid and have...

  16. Distribution of water in fresh cod

    DEFF Research Database (Denmark)

    Andersen, Charlotte Møller; Rinnan, A.

    2002-01-01

    Low-field (1)H nuclear magnetic resonance (NMR) transverse relaxation was used to measure water mobility and distribution of water in fresh cod fillets. The NMR relaxations were analysed with the so-called SLICING method giving uni-exponential profiles from which the transverse relaxation time (T(2......)-values) and the relative sizes of the water populations were calculated. Two water populations with the T(2)-values of 50 and 94 ms were obtained. The shortest relaxation time was primarily found near the head, and water with the longest relaxation time was primarily found near the tail. This variation...... can he explained by the smaller muscle cells and muscle fibers in the tail, which may influence the distributions of water into the different pools. The amount of one of the water populations was correlated to the overall water content with a correlation coefficient of -0.94. (C) 2002 Elsevier Science...

  17. The eastern Baltic cod fishery: a fleet-based management strategy evaluation framework to assess the cod recovery plan of 2008

    DEFF Research Database (Denmark)

    Bastardie, Francois; Nielsen, J. Rasmus; Kraus, Gerd

    2010-01-01

    The eastern Baltic cod fishery: a fleet-based management strategy evaluation framework to assess the cod recovery plan of 2008. - ICES Journal of Marine Science, 67: 71-86.......The eastern Baltic cod fishery: a fleet-based management strategy evaluation framework to assess the cod recovery plan of 2008. - ICES Journal of Marine Science, 67: 71-86....

  18. Could seals prevent cod recovery in the Baltic Sea?

    DEFF Research Database (Denmark)

    MacKenzie, Brian; Eero, Margit; Ojaveer, Henn

    2011-01-01

    they were formerly productive and supported sustainable fisheries. Here we investigate how a cod (Gadus morhua) population in the Baltic Sea whose biomass was reduced due to a combination of high exploitation and deteriorating environmental conditions might recover and develop in the 21st century...... in an ecosystem that likely will change due to both the already started recovery of a cod predator, the grey seal Halichoerus grypus, and projected climate impacts. Simulation modelling, assuming increased seal predation, fishing levels consistent with management plan targets and stable salinity, shows...... knowledge of cod and seal interactions, seal predation was found to have much lower impact on cod recovery, compared to the effects of exploitation and salinity. These results suggest that dual management objectives (recovery of both seal and cod populations) are realistic but success in achieving...

  19. STUDY ON THE RELATIONSHIP BETWEEN J-INTEGRAL AND COD

    Institute of Scientific and Technical Information of China (English)

    Y. G. Cao; X. Y. Sun; K. Tanaka

    2007-01-01

    J-integral and crack opening displacement δ (COD) were important parameters for characterizationof fractures in engineering materials. The relationship between J-integral and COD has beeninvestigated for a long time and was generally represented as J = mσyδ, where σy is the yield strengthand m is a function of specimen geometry and material properties. To determine the value of m,extensive studies and experiments have been performed. The method that used the fracture-surfacetopography analysis (FRASTA) for determining J-integral from fracture surfaces of materials wasintroduced. On the basis of the relationship between COD and fracture surface average profile,the relationship between J-integral and COD was deduced and compared with the generally usedequation. The method was experimentally confirmed to be able to provide a new way to determinethe relationship between J-integral and COD.

  20. Parasites of wild cod postlarvae (Gadus morhua L.) in the North Sea

    DEFF Research Database (Denmark)

    Kuhn, Jesper; Kania, Per W.; Skovgaard, Alf;

    of Denmark. Skin, fins, body cavity, gut and intestinal tract were checked and parasites were identified either through morphology or with the use of PCR. A total of 58 parasites were found counting 38 individuals of the ectoparasitic copepod Caligus elongatus, 7 individuals of the endoparasitic nematode...... gadoid species in the North Atlantic and has been the subject of several parasitological studies. Past research is however primarily concentrated around adult or juvenile fish and our knowledge concerning the larval stage is very sparse. This is in spite of the general belief that at this stage, fish...... larvae encounter highest levels of mortally and predation. In this sense effects of parasitization could be speculated to have a higher impact. In this study we investigated the occurrence of metazoan ecto- and endoparasites in a school of 209 cod post larvae (9mm – 39mm) caught in the North Sea...

  1. Does DNA extraction affect the physical and chemical composition of historical cod (Gadus morhua) otoliths?

    DEFF Research Database (Denmark)

    Therkildsen, Nina Overgaard; Eg Nielsen, Einar; Hüssy, Karin;

    2010-01-01

    conflicting interests regarding how the limited and irreplaceable otolith collections should be used. To resolve this, it is important to find out whether DNA extraction damages otoliths such that they can no longer be used for other research purposes or whether individual otoliths can be used in multiple...... applications. We examined the effects of three different DNA extraction methods on the elemental composition, the morphology, and the clarity of annual growth increments for successful age estimation of Atlantic cod (Gadus morhua) otoliths that had been archived for 0–31 years. The three extraction methods...... yielded DNA of comparable quality, and none of the methods caused major damage to the otoliths. Of the element concentrations measured, only Mg and Rb showed considerable changes resulting from DNA extraction. The physical properties of the otolith (morphology and clarity of annual growth increments) were...

  2. Farmed cod escapees and net-pen spawning left no clear genetic footprint in the local wild cod population

    Directory of Open Access Journals (Sweden)

    Rebekka Varne

    2015-11-01

    Full Text Available This study investigated a potential genetic introgression from farmed to wild cod Gadus morhua L. in the Trondheimsfjord, Norway. During the first 2 yr of operation of a cod farm in the inner part of the fjord, 2 large escape events and extensive pen spawning were reported. Analyses of 4 allozyme markers revealed no significant changes in allele frequencies between samples of wild cod before and after cod farming, although prominent allele frequency differences were demonstrated between wild and farmed samples. Analyses of 10 DNA markers showed a significant change between pre- and post-farming samples, due to contradictory allele frequency differences at Tch11, Pan I and Gmo132. Excluding those 3 markers due to null alleles (Tch11 and selection (Gmo132 and Pan I, the DNA markers paralleled the non-changed allele frequency signal from the allozymes. The topographies of the allozyme- and DNA-based dendrogram of the samples were congruent. Recaptures of tagged and released farmed cod indicated a seemingly random diffusion throughout the fjord and ended after approx. 6 mo. During an ongoing pen spawning, plankton net surveys sampling for cod eggs in the surroundings of the cod farm suggested the eggs originated from the farm. No larvae were present in the plankton samples. The apparent absence of introgression is explained relative to fitness and survival of pen-spawned larvae and adult escapees, and to a purging effect of the estuarine circulation of the Trondheimsfjord.

  3. Semiautomated Determination of COD in Environmental Water Samples

    OpenAIRE

    Korenaga, Takashi; Ikatsu, Hisayoshi; Moriwake, Toshio; Takahashi, Teruo

    1980-01-01

    A new method based on the principle of flow injection analysis is presented for the semiautomated determinationof chemical oxygen demand (COD) in environmental watersamples. The method is rapid and continuous, and suitablefor the monitoring of COD in wastewaters. The apparatusused was simply constructed by parts commercially availablefor high performance liquid chromatography. Teflon tubing heated with a boiling water was used as a reactor and simultaneously used for mixing coils and transmis...

  4. 2005 Atlantic Hurricanes Poster

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The 2005 Atlantic Hurricanes poster features high quality satellite images of 15 hurricanes which formed in the Atlantic Basin (includes Gulf of Mexico and...

  5. South Atlantic Shrimp System

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The SEFSC, in cooperation with the South Atlantic states, collects South Atlantic shrimp data from dealers and fishermen. These data are collected to provide catch,...

  6. Salted and dried Cod preserved by vacuum and modified atmosphere

    Directory of Open Access Journals (Sweden)

    Maria José Rodrigues

    2014-06-01

    Full Text Available Temperatures higher than 20ºC can boost the growth, on the salted and dried cod surface, of bacteria that present a red pigment (Rodrigues et al., 2003; Rodrigues et al., 2005. These organisms, besides the change of the food product appearance, also cause an unpleasant flavor and the product is rejected by the consumers, although does not cause any health concern. Currently, the export of salted and dried cod, to Africa, has increased and a great amount of product is rejected due to the high environmental temperature and the lack of a proper cold chain storage infrastructure. Vacuum packaging, and modified atmosphere packaging have been used for fresh and cooked seafood preservation, but, as far as the authors know, were never used to preserve salted and dried fish. In the present study it was observed the effect of vacuum packaging, packaging with 80%N2:20%CO2 and finally the addition of sodium metabisulfite on the salted and dried cod stored under temperature abuse (15ºC, 25ºC and 35ºC. Accordingly, packaging under vacum and, specially, packaging with 80%N2:20%CO2 successfuly increased the shellife of salted and dried cod . The addition of sodium metabisulfite has increased the shelflife of salted and dried cod preserved at 15ºC, but not of salted and dried cod preserved at 25ºC and 35ºC.

  7. Implications of stock recovery for a neighbouring management unit: experience from the Baltic cod

    DEFF Research Database (Denmark)

    Eero, Margit; Hansen, Jakob Hemmer; Hüssy, Karin

    2014-01-01

    Cod in the Baltic Sea is assessed and managed as two separate stocks, i.e. eastern and western Baltic cod. The eastern Baltic cod has recently started to recover after several decades of severe depletion. In the present study, we suggest that the recovery of the eastern Baltic cod population has ...

  8. Lobster and cod benefit from small-scale northern marine protected areas: inference from an empirical before–after control-impact study

    Science.gov (United States)

    Moland, Even; Olsen, Esben Moland; Knutsen, Halvor; Garrigou, Pauline; Espeland, Sigurd Heiberg; Kleiven, Alf Ring; André, Carl; Knutsen, Jan Atle

    2013-01-01

    Marine protected areas (MPAs) are increasingly implemented as tools to conserve and manage fisheries and target species. Because there are opportunity costs to conservation, there is a need for science-based assessment of MPAs. Here, we present one of the northernmost documentations of MPA effects to date, demonstrated by a replicated before–after control-impact (BACI) approach. In 2006, MPAs were implemented along the Norwegian Skagerrak coast offering complete protection to shellfish and partial protection to fish. By 2010, European lobster (Homarus gammarus) catch-per-unit-effort (CPUE) had increased by 245 per cent in MPAs, whereas CPUE in control areas had increased by 87 per cent. Mean size of lobsters increased by 13 per cent in MPAs, whereas increase in control areas was negligible. Furthermore, MPA-responses and population development in control areas varied significantly among regions. This illustrates the importance of a replicated BACI design for reaching robust conclusions and management decisions. Partial protection of Atlantic cod (Gadus morhua) was followed by an increase in population density and body size compared with control areas. By 2010, MPA cod were on average 5 cm longer than in any of the control areas. MPAs can be useful management tools in rebuilding and conserving portions of depleted lobster populations in northern temperate waters, and even for a mobile temperate fish species such as the Atlantic cod. PMID:23303544

  9. Lobster and cod benefit from small-scale northern marine protected areas: inference from an empirical before-after control-impact study.

    Science.gov (United States)

    Moland, Even; Olsen, Esben Moland; Knutsen, Halvor; Garrigou, Pauline; Espeland, Sigurd Heiberg; Kleiven, Alf Ring; André, Carl; Knutsen, Jan Atle

    2013-03-01

    Marine protected areas (MPAs) are increasingly implemented as tools to conserve and manage fisheries and target species. Because there are opportunity costs to conservation, there is a need for science-based assessment of MPAs. Here, we present one of the northernmost documentations of MPA effects to date, demonstrated by a replicated before-after control-impact (BACI) approach. In 2006, MPAs were implemented along the Norwegian Skagerrak coast offering complete protection to shellfish and partial protection to fish. By 2010, European lobster (Homarus gammarus) catch-per-unit-effort (CPUE) had increased by 245 per cent in MPAs, whereas CPUE in control areas had increased by 87 per cent. Mean size of lobsters increased by 13 per cent in MPAs, whereas increase in control areas was negligible. Furthermore, MPA-responses and population development in control areas varied significantly among regions. This illustrates the importance of a replicated BACI design for reaching robust conclusions and management decisions. Partial protection of Atlantic cod (Gadus morhua) was followed by an increase in population density and body size compared with control areas. By 2010, MPA cod were on average 5 cm longer than in any of the control areas. MPAs can be useful management tools in rebuilding and conserving portions of depleted lobster populations in northern temperate waters, and even for a mobile temperate fish species such as the Atlantic cod. PMID:23303544

  10. Paternal effects on early life history traits in Northwest Atlantic cod, Gadus morhua

    DEFF Research Database (Denmark)

    Kroll, M.-M.; Peck, M.A.; Butts, Ian A.E.;

    2013-01-01

    It is important to understand parental effects on early life history of fish as manifested, for example, in individual fitness of offspring. Immediately after fertilization, parental contributions (both genetic and non-genetic) to embryos will affect larval ontogeny, physiology, morphology and su...... that the choice of mate during spawning can play a large role in offspring fitness...

  11. The use of otolith microstructure to estimate age in adult Atlantic cod Gadus morhua

    DEFF Research Database (Denmark)

    Hüssy, Karin; Hinrichsen, H.H.; Fey, D.P.;

    2010-01-01

    be tightly coupled to the annual cycle in environmental temperature at a depth of 30–60 m, where G. morhua predominantly reside. Between 135 and 200 increments occurred within the different zones, with a non-significant trend towards lower increment numbers and widths with distance from the primary...... primordium of the otolith. Increment formation apparently ceased at temperatures <5–6° C, but growth during the cold months corresponded closely with estimated growth rates. The increment patterns seemed to reflect annual cycles in environmental temperature, and the count of the increment cycles may thus be...... a promising tool for the determination of the true age of Baltic G. morhua....

  12. Conserving marine biodiversity: insights from life-history trait candidate genes in Atlantic cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Hansen, Jakob Hemmer; Therkildsen, Nina Overgaard; Meldrup, Dorte;

    2014-01-01

    Recent technological developments have facilitated an increased focus on identifying genomic regions underlying adaptive trait variation in natural populations, and it has been advocated that this information should be important for designating population units for conservation. In marine fishes,...... only neutral markers. Accordingly, results also suggest that information about adaptive genetic variation will be useful for targeted conservation and management in this and other marine species......Recent technological developments have facilitated an increased focus on identifying genomic regions underlying adaptive trait variation in natural populations, and it has been advocated that this information should be important for designating population units for conservation. In marine fishes......, phenotypic studies have suggested adaptation through divergence of life-history traits among natural populations, but the distribution of adaptive genetic variation in these species is still relatively poorly known. In this study, we extract information about the geographical distribution of genetic...

  13. Fathers modify thermal reaction norms for hatching success in Atlantic cod, Gadus morhua

    DEFF Research Database (Denmark)

    Dahlke, Flemming T.; Politis, Sebastian Nikitas; Butts, Ian;

    2016-01-01

    Climate-driven warming is altering marine ecosystems at an unprecedented rate and evolutionary adaptation may represent the last resort for many ectothermic organisms to avoid local extinction. The first step to elucidate the potential for adaptation to unfavorable thermal conditions is to assess...... the degree of genotype-based variation in thermal reaction norms of vital fitness traits. Marine broadcast spawning fishes experience extremely high rates ofmortality during early life stages. Paternally derived (genetic) variation underlying offspring fitness in adverse environmental conditions may...

  14. A New Spectrophotometric Method for Measuring COD of Seawater

    Institute of Scientific and Technical Information of China (English)

    LIU Ying; JI Hongwei; XIN Huizhen; LIU Li

    2006-01-01

    This research studied a new spectrophotometric method for measuring the chemical oxygen demand (COD) of seawater. In this method, the COD was measured using a spectrophotometer instead of titrating with sodium thiosulphate.The measuring wavelength was selected to be 470 nm, and the COD of three standard glucose solutions (COD = 0.5, 1.5 and2.5 mgL-1, respectively) and two seawater samples (from the South Yellow Sea and Jiaozhou Bay) were measured using the spectrophotometric method and titrimetric method respectively. The results showed that the spectrophotometric method was somewhat better than the titrimetric method. The relative standard deviation (RSD) of the spectrophotometric method was less than 2.7%, and the recovery of seawater samples ranged from 96.3% to 103.8%. In addition, the spectrophotometric method has other advantages such as expeditiousness, operation simplicity, analysis automatization, etc. Therefore the spectrophotometric method can be used to measure the COD of seawater with satisfactory results.

  15. Analysis of the origin of soluble COD in Lake Sanaru

    Directory of Open Access Journals (Sweden)

    Yu Qian

    2016-01-01

    Full Text Available This study intends to investigate the origin of Sol-COD by analyzing the water quality data and the amount of detergent consumption in the Lake Sanaru region,located at Hamamatsu City in Japan. It was found that there is a correlation between the total COD in the lake and the sewer coverage in the upstream region of Lake Sanaru. This fact implies that the water quality of upstream rivers receiving untreated wastewater from homes would greatly affect the water quality of the lake. Since the value of Sol-COD in the rivers is close to that of Lake Sanaru, the main origin of the Sol-COD was supposed to be the organic components in the river water especially those of detergents, because the Sol-CODof detergent didn’t decompose completely.Thus, the amount of detergent emitted in the upstreamlakeregion was determined using the public data of the pollution from the sewer system and the national average of detergent consumption. The calculated value of the detergent concentration agreed very well with the one measured in the upstream rivers, meaning that detergents strongly affected water quality in upstream rivers and also the majority of Sol-COD in Lake Sanaru.

  16. The effects of pre-salting methods on salt and water distribution of heavily salted cod, as analyzed by 1H and 23Na MRI, 23Na NMR, low-field NMR and physicochemical analysis

    DEFF Research Database (Denmark)

    Guðjónsdóttir, María; Traoré, Amidou; Jónsson, Ásbjörn;

    2015-01-01

    The effect of different pre-salting methods (brine injection with salt with/without polyphosphates, brining and pickling) on the water and salt distribution in dry salted Atlantic cod (Gadus morhua) fillets was studied with proton and sodium NMR and MRI methods, supported by physicochemical analy...

  17. Mortality trends of stranded marine mammals on Cape Cod and southeastern Massachusetts, USA, 2000 to 2006.

    Science.gov (United States)

    Bogomolni, Andrea L; Pugliares, Katie R; Sharp, Sarah M; Patchett, Kristen; Harry, Charles T; LaRocque, Jane M; Touhey, Kathleen M; Moore, Michael

    2010-01-25

    To understand the cause of death of 405 marine mammals stranded on Cape Cod and southeastern Massachusetts between 2000 and 2006, a system for coding final diagnosis was developed and categorized as (1) disease, (2) human interaction, (3) mass-stranded with no significant findings, (4) single-stranded with no significant findings, (5) rock and/or sand ingestion, (6) predatory attack, (7) failure to thrive or dependent calf or pup, or (8) other. The cause of death for 91 animals could not be determined. For the 314 animals that could be assigned a cause of death, gross and histological pathology results and ancillary testing indicated that disease was the leading cause of mortality in the region, affecting 116/314 (37%) of cases. Human interaction, including harassment, entanglement, and vessel collision, fatally affected 31/314 (10%) of all animals. Human interaction accounted for 13/29 (45%) of all determined gray seal Halichoerus grypus mortalities. Mass strandings were most likely to occur in northeastern Cape Cod Bay; 97/106 (92%) of mass stranded animals necropsied presented with no significant pathological findings. Mass strandings were the leading cause of death in 3 of the 4 small cetacean species: 46/67 (69%) of Atlantic white-sided dolphin Lagenorhynchus acutus, 15/21 (71%) of long-finned pilot whale Globicephala melas, and 33/54 (61%) of short-beaked common dolphin Delphinus delphis. These baseline data are critical for understanding marine mammal population health and mortality trends, which in turn have significant conservation and management implications. They not only afford a better retrospective analysis of strandings, but ultimately have application for improving current and future response to live animal stranding. PMID:20225675

  18. COD removal characteristics in air-cathode microbial fuel cells

    KAUST Repository

    Zhang, Xiaoyuan

    2015-01-01

    © 2014 Elsevier Ltd. Exoelectrogenic microorganisms in microbial fuel cells (MFCs) compete with other microorganisms for substrate. In order to understand how this affects removal rates, current generation, and coulombic efficiencies (CEs), substrate removal rates were compared in MFCs fed a single, readily biodegradable compound (acetate) or domestic wastewater (WW). Removal rates based on initial test conditions fit first-order kinetics, but rate constants varied with circuit resistance. With filtered WW (100Ω), the rate constant was 0.18h- 1, which was higher than acetate or filtered WW with an open circuit (0.10h- 1), but CEs were much lower (15-24%) than acetate. With raw WW (100Ω), COD removal proceeded in two stages: a fast removal stage with high current production, followed by a slower removal with little current. While using MFCs increased COD removal rate due to current generation, secondary processes will be needed to reduce COD to levels suitable for discharge.

  19. Causes and projections of abrupt climate-driven ecosystem shifts in the North Atlantic

    DEFF Research Database (Denmark)

    Beaugrand, G.; Edwards, M.; Brander, Keith;

    2008-01-01

    Warming of the global climate is now unequivocal and its impact on Earth' functional units has become more apparent. Here, we show that marine ecosystems are not equally sensitive to climate change and reveal a critical thermal boundary where a small increase in temperature triggers abrupt...... ecosystem shifts seen across multiple trophic levels. This large-scale boundary is located in regions where abrupt ecosystem shifts have been reported in the North Atlantic sector and thereby allows us to link these shifts by a global common phenomenon. We show that these changes alter the biodiversity...... and carrying capacity of ecosystems and may, combined with fishing, precipitate the reduction of some stocks of Atlantic cod already severely impacted by exploitation. These findings offer a way to anticipate major ecosystem changes and to propose adaptive strategies for marine exploited resources such as cod...

  20. CodY-mediated regulation of Streptococcus pyogenes exoproteins

    Directory of Open Access Journals (Sweden)

    McDowell Emily J

    2012-06-01

    Full Text Available Abstract Background The production of Streptococcus pyogenes exoproteins, many of which contribute to virulence, is regulated in response to nutrient availability. CodY is a transcriptional regulator that controls gene expression in response to amino acid availability. The purpose of this study was to identify differences in the expression of streptococcal exoproteins associated with deletion of the codY gene. Results We compared the secreted proteins produced by wild-type S. pyogenes to a codY mutant in the post-exponential phase of growth. We used both one and two-dimensional gel electrophoresis to separate exoproteins. Proteins that were significantly different in abundance upon repeated analysis were identified with tandem mass spectrometry. The production of the secreted cysteine protease SpeB, a secreted chromosomally encoded nuclease (SdaB, and a putative adhesion factor (Spy49_0549 were more abundant in supernatant fluids obtained from the codY mutant. In addition, hyaluronidase (HylA, CAMP factor (Cfa, a prophage encoded nuclease (Spd-3, and an uncharacterized extracellular protein (Spy49_0015 were less abundant in supernatant fluids obtained from the codY mutant strain. Enzymatic assays showed greater DNase activity in culture supernatants isolated in the post-exponential phase of growth from the codY mutant strain compared to the wild-type strain. Because extracellular nucleases and proteases can influence biofilm formation, we also measured the ability of the strains to form biofilms during growth with both rich medium (Todd Hewitt yeast extract; THY and chemically defined media (CDM. No difference was observed with rich media but with CDM the biofilms formed by the codY mutant strain had less biomass compared to the wild-type strain. Conclusions Overall, the results indicate that CodY alters the abundance of a select group of S. pyogenes exoproteins, including DNases, a protease, and hylauronidase, which together may alleviate

  1. A wasted resource: cod discards in the North Sea

    DEFF Research Database (Denmark)

    Feekings, Jordan P.; Poos, Jan Jaap; Aarts, Geert;

    2012-01-01

    The public, political, and stakeholder perception of fisheries discards is that they are a waste of a valuable resource. In the North Sea, fisheries discards are some of the highest in the world. Cod (Gadus morhua) has contributed considerably to the amount discarded. The declining cod stock within......, spatially and temporally, in discarding over the past decade while pinpointing the major reasons to why it occurs. We discuss how such information can be used to improve future fishing activities and their subsequent catch compositions under a discard...

  2. A sensometric approach to cod-quality measurement

    DEFF Research Database (Denmark)

    Jensen, H.S.; Jørgensen, Bo

    1997-01-01

    The quality index method was used for describing the sensory quality of thawed whole cod and raw fillet and the quality of boiled fillet was assessed by profiling analysis. These data were compared to the water holding capacity of the minced cod by principal component analysis (PCA) and partial l...... by determining the ability of the assessors to predict the water holding capacity through partial least squares regression and by examining the distances between PCA-models of profiling data from the single assessors. (C) 1997 Elsevier Science Ltd. All rights reserved....

  3. Analysis of the origin of soluble COD in Lake Sanaru

    OpenAIRE

    Yu Qian; Oomae Ayaka; Futamata Hiroyuki; Matsuda Satoshi

    2016-01-01

    This study intends to investigate the origin of Sol-COD by analyzing the water quality data and the amount of detergent consumption in the Lake Sanaru region,located at Hamamatsu City in Japan. It was found that there is a correlation between the total COD in the lake and the sewer coverage in the upstream region of Lake Sanaru. This fact implies that the water quality of upstream rivers receiving untreated wastewater from homes would greatly affect the water quality of the lake. Since the va...

  4. Recovery in eastern Baltic cod: is increased recruitment caused by decreased predation on early life stages?

    DEFF Research Database (Denmark)

    Neumann, Viola; Köster, Fritz; Schaber, M.;

    2014-01-01

    Cod (Gadus morhua) recruitment in the eastern Baltic Sea is influenced by predation on early life stages by sprat (Sprattus sprattus) and herring (Clupea harengus), which is considered as one of the mechanisms preventing cod recovery in the 1990s. In the light of improved cod recruitment in the s......Cod (Gadus morhua) recruitment in the eastern Baltic Sea is influenced by predation on early life stages by sprat (Sprattus sprattus) and herring (Clupea harengus), which is considered as one of the mechanisms preventing cod recovery in the 1990s. In the light of improved cod recruitment...

  5. Clock genes in a north Atlantic key zooplankter - Expression during overwintering in a high Arctic fjord

    OpenAIRE

    Häfker, N. Sören; Meyer, Bettina; Teschke, Mathias

    2016-01-01

    The copepod Calanus finmarchicus plays a crucial role in the north Atlantic food web, channelling energy from phytoplankton primary production to higher trophic levels including commercially important fish stocks like herring and cod. The copepod species is spreading northward into the Arctic due to ocean warming. The activity phase of C. finmarchicus in spring/summer is characterized by diel vertical migration, meaning that the animals migrate to surface waters around sunset to feed, and bac...

  6. Improvement of COD control system of NewSUBARU

    International Nuclear Information System (INIS)

    At the NewSUBARU, the response matrix calculated from an optics model had been used for a closed orbit correction (COD) program. We measured the response matrix of NewSUBARU and used it in the new program. We compared performance of the new one with that of the old one. (author)

  7. 78 FR 41305 - Collect on Delivery (COD)-Service Features

    Science.gov (United States)

    2013-07-10

    ... INFORMATION: The Postal Service published a notice of proposed rulemaking on May 31, 2013 (78 FR 32612-32613... 111 Collect on Delivery (COD)--Service Features AGENCY: Postal Service TM . ACTION: Final rule... proposed rule were received, the Postal Service will adopt the proposed changes to Collect on Delivery...

  8. Modelling axisymmetric cod-ends made of different mesh types

    DEFF Research Database (Denmark)

    Priour, D.; Herrmann, Bent; O'Neill, F.G.

    2009-01-01

    Cod-ends are the rearmost part of trawl fishing gears. They collect the catch, and for many important species it is where fish selection takes place. Generally speaking they are axisymmetric, and their shape is influenced by the catch volume, the mesh shape, and the material characteristics...

  9. North Atlantic Temperature Anomaly

    OpenAIRE

    Vukcevic, M.A.

    2009-01-01

    The author postulates the existence of a high correlation between North Atlantic Temperature Anomaly and the variations of magnetic field over the Hudson Bay region. Post-glacial uplift and convection in the underlying mantle uplift (as reflected in changes of the area's magnetic intensity) are making significant contribution to the Atlantic basin climate change.

  10. Drivers of spring and summer variability in the coastal ocean offshore of Cape Cod, MA

    Science.gov (United States)

    Kirincich, Anthony R.; Gawarkiewicz, Glen G.

    2016-03-01

    The drivers of spring and summer variability within the coastal ocean east of Cape Cod, Massachusetts, a critical link between the Gulf of Maine and Mid-Atlantic Bight, are investigated using 2 years of shipboard and moored hydrographic and velocity observations from 2010 and 2011. The observations reveal sharp differences in the spring transition and along-shelf circulation due to variable freshwater and meteorological forcing, along with along-shelf pressure gradients. The role of the along-shelf pressure gradient is inferred using in situ observations of turbulent momentum flux, or Reynolds stresses, estimated from the ADCP-based velocities using recently developed methods and an inversion of the along-shelf momentum balance. During spring, the locally relevant along-shelf pressure gradient contains a sizable component that is not coupled to the along-shelf winds and often opposes the regional sea level gradient. Together with the winds, local pressure gradients dominate along-shelf transport variability during spring, while density-driven geostrophic flows appear to match the contribution of the local winds during summer. These results suggest that local effects along the Outer Cape have the potential to cause significant changes in exchange between the basins.

  11. Estimation of bacterial quality of cod fillets with the disc flotation method

    International Nuclear Information System (INIS)

    Spoilage bacteria of cod fillets were desorbed off the fillet surface by ultrasonication. Catalase activity of these bacteria was determined using the disc flotation method after selective heat inactivation of the endogenous cod catalase and then correlated with the colony forming units. The method was applied to cod fillets from ten retail sources with satisfactory results

  12. CodY of Streptococcus pneumoniae : Link between nutritional gene regulation and colonization

    NARCIS (Netherlands)

    Hendriksen, Wouter T.; Bootsma, Hester J.; Estevao, Silvia; Hoogenboezem, Theo; de Jong, Anne; de Groot, Ronald; Kuipers, Oscar P.; Hermans, Peter W. M.

    2008-01-01

    CodY is a nutritional regulator mainly involved in amino acid metabolism. It has been extensively studied in Bacillus subtilis and Lactococcus lactis. We investigated the role of CodY in gene regulation and virulence of the human pathogen Streptococcus pneumoniae. We constructed a codY mutant and ex

  13. Episodic Eolian Sand Deposition in the Past 4000 Years in Cape COD National Seashore, Massachusetts, USA in Response to Possible Hurricane/storm and Anthropogenic Disturbances

    Science.gov (United States)

    Forman, Steven

    2015-02-01

    The eolian sand depositional record for a dune field within Cape Cod National Seashore, Massachusetts is posit as a sensitive indicator of environmental disturbances in the late Holocene from a combination of factors such as hurricane/storm and forest fire occurrence, and anthropogenic activity. Stratigraphic and sedimentologic observations, particularly the burial of spodosol-like soils, and associated 14C and OSL ages that are concordant indicate at least six eolian depositional events at ca. 3750, 2500, 1800, 960, 430 and age, corresponds to documented periods of increased storminess/hurricane activity in the North Atlantic Ocean at ca. 2.0 to 1.6, and 1.0 ka and also a wetter coastal climate, which suppressed the occurrence of forest fire. Thus, local droughts are not associated with periods of dune movement in this mesic environment. Latest eolian activity on outer Cape Cod commenced in the past 300 to 500 years and may reflect multiple factors including broad-scale landscape disturbance with European colonization, an increased incidence of forest fires and heightened storminess. Eolian systems of Cape Cod appear to be sensitive to landscape disturbance and prior to European settlement may reflect predominantly hurricane/storm disturbance, despite generally mesic conditions in past 4 ka.

  14. SUBGLACIAL VOLCANO IN ATLANTIC

    OpenAIRE

    Nakamura, Shigehisa

    2010-01-01

    This is a note to satellite monitoring of the subglacial volcano in the Atlantic. The satellite data are obtained by EUMETSAT and NASA An eruption of a subglacial volcano in Iceland had issued volcanic ash, and the winds transferred the ash to the European Union in April 2010. This volcano is one of the volcanoes in the Atlantic. There are volcanoes in the north and south Atlantic. Some of them are in Azores Islands, in Canary Islands and Cape Verde Islands. Iceland is located on the zone of ...

  15. COD and Color Removal from Real Dyeing Wastewater by Ozonation.

    Science.gov (United States)

    Yang, De-min; Yuan, Jian-mei

    2016-05-01

    Ozonation of real dye wastewater for removal of color and COD reduction covering a wide range in operating parameters forms the scope of the present work. The influence of parameters such as influent pH, ozone flow rate and initial effluent concentration on ozonation efficiency has been critically examined. It has been observed from the present investigation that a maximum of COD removal efficiency of 92.5% has been achieved under optimum operating conditions (pH=11; ozone flow rate: 6×10(-3) m(3)/minute). Further the biodegradability index of the dye effluent has increased from an initial value of 0.18 to 0.49 during ozonation indicating favorable adaptation of ozonation as a primer to the biochemical technique to enhance the efficiency of biochemical treatment. PMID:27131304

  16. Ozonation of tannery effluent for removal of cod and color.

    Science.gov (United States)

    Preethi, V; Kalyani, K S Parama; Iyappan, K; Srinivasakannan, C; Balasubramaniam, N; Vedaraman, N

    2009-07-15

    Ozonation of leather dye effluent for removal of color and COD reduction covering wide range in operating parameters forms the scope of the present work. The influence of parameters such as influent pH, ozone flow rate and initial effluent concentration on ozonation efficiency has been critically examined. It has been observed from the present investigation that a maximum of COD removal efficiency of 92% has been achieved under optimum operating conditions. Further the biodegradability index of the tannery effluent has increased from an initial value of 0.18 to 0.49 during ozonation indicating favorable adaptation of ozonation as a primer to the biochemical technique to enhance the efficiency of biochemical treatment. PMID:19118944

  17. Isolation of putative probionts from cod rearing environment

    DEFF Research Database (Denmark)

    Lauzon, H.L.; Gudmundsdottir, S.; Pedersen, M.H.;

    2008-01-01

    Survival problems are encountered at early stages of intensive fish rearing and antibiotics are widely used to remedy the situation. Probiotics may provide a potential alternative method to protect larvae from opportunistic and pathogenic bacteria and promote a balanced environment. This study...... was designed to search for new probiotics to target this critical period in cod rearing. Potential probionts were selected from the naturalmicrobiota of cod aquacultural environment. The selection was based on several criteria: pathogen inhibition potential, growth characteristics, strain identification......RNA gene sequencing. Only 6 (3.2%) of 188 isolates could inhibit all three pathogens tested: Vibrio anguillarum, Aeromonas salmonicida subsp. achromogenes and Vibrio salmonicida. Differences observed in activity intensity and spectrum among inhibitory isolates emphasise the need to develop probiotic...

  18. Avoidance from petroleum hydrocarbons by the cod (Gadus morhua)

    OpenAIRE

    Bøhle, Bjørn

    1982-01-01

    In laboratory experiments cod was presented a choice situation between different concentrations of petroleum hydrocarbons, appearing as "water soluble fraction" and emulsified droplets derived from Fuel Oil No. 2. In most experiments, the fishes seemed to avoid water containing hydrocarbons, though some fishes for periods was indifferent also to considerable contaminated water. The over all results indicates that a majority of the fishes avoided water containing total hyd...

  19. COD Removal of Different Industrial Wastewater by Fenton Oxidation Process

    OpenAIRE

    Yogita Sindhi*1

    2014-01-01

    Advanced oxidation processes are possibly one of the most effective methods for the treatment of wastewater containing organic products (effluents from chemical and agrochemical industries, the textile industry, paints, dyes, etc.).Fenton process is a one of advanced oxidation process. Fenton’s process have been extensively used for the removal of COD, TOC, dyes, phenolic compounds other organic chemicals from industrial and municipal wastewater. In this study, the laboratory s...

  20. Effect of produced water on cod (Gadus morhua) immune responses

    Energy Technology Data Exchange (ETDEWEB)

    Hamoutene, D.; Mabrouk, G.; Samuelson, S.; Mansour, A.; Lee, K. [Fisheries and Oceans Canada, Dartmouth, NS (Canada). Maritimes Region, Ocean Sciences Division; Volkoff, H.; Parrish, C. [Memorial Univ. of Newfoundland, St. John' s, NL (Canada); Mathieu, A. [Oceans Ltd., St. John' s, NL (Canada)

    2007-07-01

    Studies have shown that produced water (PW) discharged from North Sea offshore platforms affects the biota at greater distances from operational platforms than originally presumed. According to PW dispersion simulations, dilution by at least 240 times occurs within 50-100 m, and up to 9000 times by 20 km from the discharge. In this study, the effect of PW on cod immunity was investigated by exposing fish to 0, 100 ppm (x 10,000 dilution) or 200 ppm (x 500) of PW for 76 days. Immune responses were evaluated at the end of the exposure. Fish from the 3 groups were injected with Aeromonas salmonicida lipopolysaccharides (LPS). Blood cell observation and flow cytometry were used to investigate the serum cortisol levels and gill histology along with ratios and respiratory burst (RB) responses of both circulating and head-kidney white blood cells (WBCs). The study revealed that baseline immunity and stress response were not affected by PW, other than an irritant-induced change in gill cells found in treated cod. In all groups, LPS injection resulted in a pronounced decrease in RB of head-kidney cells and an increase in serum cortisol and protein levels. However, the group exposed to 200 ppm of PW exhibited the most significant changes. LPS injection was also shown to influence WBC ratios, but further studies are needed to determine if this impact is stronger in fish exposed to PW. This study suggested an effect of PW on cod immunity after immune challenge with LPS.

  1. Removal of ecotoxicity and COD from tank truck cleaning wastewater.

    Science.gov (United States)

    Dries, Jan; De Schepper, Wim; Geuens, Luc; Blust, Ronny

    2013-01-01

    Tank truck cleaning (TTC) activities generate highly complex wastewater. In a previous study, we found that a significant ecotoxic effect was still present in biologically treated TTC wastewater. The aim of the present study was therefore to investigate the removal of acute toxicity from TTC wastewater by a sequence of technologies routinely applied for industrial wastewater. Acute toxicity was assayed with the widely applied and standardized Vibrio fischeri bioluminescence inhibition test. During a 5-month period, raw wastewater was grab-sampled from a full-scale TTC company and treated by the different unit operations on a laboratory scale. Chemical pretreatment of the wastewater by coagulation with FeCl3 removed approx. 38% of the influent chemical oxygen demand (COD) and reduced the bioluminescence inhibition by 8%. Biological treatment with activated sludge subsequently removed another 77% of the remaining COD. This treatment step also reduced the bioluminescence inhibition but the removal efficiency varied strongly from 5 to 92% for the different samples. Powdered activated carbon almost completely removed the remaining COD and inhibition in all samples. The results suggest that conventional technologies did not suffice for complete removal of toxicity from TTC wastewater, and that advanced wastewater treatment technologies such as activated carbon are required for a satisfactory detoxification. PMID:24292468

  2. Removal of COD from laundry wastewater by electrocoagulation/electroflotation

    Energy Technology Data Exchange (ETDEWEB)

    Wang, C.-T. [Department of Safety Health and Environmental Engineering, Chung Hwa University of Medical Technology, Tainan County, Hsien 717, Taiwan (China)], E-mail: ctwwang@mail.hwai.edu.tw; Chou, W.-L. [Department of Safety Health and Environmental Engineering and Institute of Occupational Safety and Hazard Prevention, HungKuang University, Sha-Lu, Taichung 433, Taiwan (China); Kuo, Y.-M. [Department of Safety Health and Environmental Engineering, Chung Hwa University of Medical Technology, Tainan County, Hsien 717, Taiwan (China)

    2009-05-15

    The removal efficiency of COD in the treatment of simulated laundry wastewater using electrocoagulation/electroflotation technology is described. The experimental results showed that the removal efficiency was better, reaching to about 62%, when applying ultrasound to the electrocoagulation cell. The solution pH approached neutrality in all experimental runs. The optimal removal efficiency of COD was obtained by using the applied voltage of 5 V when considering the energy efficiency and the acceptable removal efficiency simultaneously. The Cl{sup -} concentration of less than 2500 ppm had a positive effect on the removal efficiency. The performance of the monopolar connection of electrodes was better than that of the bipolar connection in this work. In addition, the removal efficiency of using Al electrodes was higher in comparison with using Fe electrodes in the study. The highest COD removal amount per joule was found to be 999 mg dm{sup -3} kW h{sup -1} while using two Al electrodes, although the removal efficiency increased with the number of Al plates.

  3. Atlantic Salmon Telemetry Monitoring

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Annual telemetry data are collected as part of specific projects (assessments within watersheds) or as opportunistic efforts to characterize Atlantic salmon smolt...

  4. Woman Swims Atlantic

    Institute of Scientific and Technical Information of China (English)

    贾庆文

    2009-01-01

    Jennifer Figge pressed her toes into the Caribbean sand, excited and exhausted as she touched land this week for the first time in almost a month. Reaching a beach in Trinidad, she became the first woman on record to s,Mm across the Atlantic Ocean-a dream she'd had since the early 1960s, when a stormy trans-Atlantic flight got her thinking she could wear a life vest and swim the rest of the way if needed.

  5. Transcriptomic analysis and biomarkers (Rag1 and Igμ) for probing the immune system development in Pacific cod, Gadus macrocephalus.

    Science.gov (United States)

    Mao, Ming-Guang; Li, Xing; Perálvarez-Marín, Alejandro; Jiang, Jie-Lan; Jiang, Zhi-Qiang; Wen, Shi-Hui; Lü, Hui-Qian

    2015-06-01

    Mortality (>90%) is a big concern in larval rearing facilities of Pacific cod, Gadus macrocephalus, limiting its culture presently still in the experimental stages. Understanding the immune system development of G. macrocephalus is crucial to optimize the aquaculture of this species, to improve the use of economic resources and to avoid abuse of antibiotics. For the transcriptome analysis, using an Illumina sequencing platform, 61,775,698 raw reads were acquired. After a de novo assembly, 77,561 unigenes were obtained. We have classified functionally these transcripts by Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG). 27 genes mainly related to hematopoietic or lymphoid organ development and somatic diversification of immune receptors have been reported for the first time in Pacific cod, and 14 Ig heavy chain (μ chain) locuses were assembled using Trinity. Based on our previous achievement, we have chosen Rag1 and Igμ as immune system development biomarkers. Full length cDNA of Rag1 and Igμ as biomarkers were obtained respectively using RACE PCR. Concerning Rag1, the deduced amino acid of Rag1 and protein immunodetection revealed a Rag1 isoform of 69 kDa, significantly different from other fish orthologs, such as Oncorhynchus mykiss (121 kDa). Phylogenetic analysis reveals a unique immune system for the Gadus genre, not exclusive for Atlantic cod, among vertebrates. Meanwhile, full length cDNA of Igμ included an ORF of 1710 bp and the deduced amino acid was composed of a leader peptide, a variable domain, CH1, CH2, Hinge, CH3, CH4 and C-terminus, which was in accordance with most teleost. Absolute quantification PCR revealed that significant expression of Rag1 appeared earlier than Igμ, 61 and 95 dph compared to 95 dph, respectively. Here we report the first transcriptomic analysis of G. macrocephalus as the starting point for genetic research on immune system development towards improving the Pacific cod aquaculture.

  6. The North Atlantic Region and Socio-Economic impacts of Global Change: Tracking Change using Arctic Social Indicators

    OpenAIRE

    Sölmundur Karl Pálsson

    2009-01-01

    The interest of social scientists on the arctic has increased steadily in recent years, because of the climate change and its impacts on resources. Scientists have predicted some environmental and social change in the arctic. The focus of this paper will be on the north Atlantic region and possible impacts of global changes. The possible impacts of climate change on Greenland and Iceland is shift in commercial species, especially on cod and shrimp. The main interest of social scientists o...

  7. Standardization of BOD₅/COD ratio as a biological stability index for MSW.

    Science.gov (United States)

    Cossu, Raffaello; Lai, Tiziana; Sandon, Annalisa

    2012-08-01

    The control of biodegradable substances is the key issue in evaluating the short and long-term emission potential and environmental impact of a landfill. Aerobic and anaerobic indices, such as respirometric index (RI) and biomethane potential production (GB21), can be used in the estimation of the stability of solid waste samples. Previous studies showed different degrees of relationship between BOD₅/COD ratio compared with RI4. Aim of this study is to standardize the parameter BOD₅/COD ratio and to test the methodology under different operating conditions (dynamic or static leaching and leaching duration, 6 and 24-h) keeping constant temperature and liquid/solid ratio (L/S=10 l/kg(TS)), with the introduction of a COD fractioning method. The COD fractioning is based on the differentiation between the soluble fraction (COD(sol)) and the colloidal fraction (COD(coll)) using a flocculation method. The BOD₅/COD and the BOD₅/COD(sol) indices are both consistent and significant and can be used as stability indices. The BOD₅/COD ratio does not seem to be influenced, for the same test duration, by the type of test, static or dynamic. In the same way the longer test duration (24-h) does not influence significantly the values of BOD₅/COD ratio. As a consequence a leaching test duration of 6-h is preferable to avoid the beginning of the hydrolysis and oxidation processes.

  8. North Atlantic Circulation

    Science.gov (United States)

    Molinari, R.; Bryan, K.; Schott, F.

    The intensity of the North Atlantic winddriven and thermohaline circulation and the close proximity of many oceanographic installations make the North Atlantic a particularly favored region of the world ocean from the standpoint of research in ocean circulation. Recent increases in available data and advances in numerical modeling techniques served as the impetus to convene a joint workshop of modelers and observers working on the North Atlantic with the Scientific Committee on Oceanic Research (SCOR) Working Group (WG) 68 (“North Atlantic Circulation”). Goals of the workshop were to provide an update on data sets and models and to discuss the poleward heat flux problem and possible monitoring strategies. The joint Workshop/SCOR WG-68 meeting was convened by F. Schott (chairman of the working group; Rosenstiel School of Marine and Atmospheric Science, Miami, Fla.), K. Bryan (National Oceanic and Atmospheric Administration/ Geophysical Fluid Dynamics Laboratory (NOAA/GFDL)), and R. Molinari (NOAA/Atlantic Oceanographic and Meteorological Laboratory (NOAA/AOML)).

  9. Review of western Baltic cod (Gadus morhua) recruitment dynamics

    DEFF Research Database (Denmark)

    Hüssy, Karin

    2011-01-01

    , with progressively later spawning towards the east. Genetic stock structure and tagging indicate some degree of natal homing for spawning. The highly variable hydrodynamic conditions and the fact that cod eggs float in the water column cause their entrainment by currents, and their destination is determined...... by the prevailing winds and currents. Drift is almost exclusively to the east, but the magnitude and its impact on the structure of the affected stocks (Kattegat, western Baltic, and eastern Baltic) remains unresolved. Salinity limits the east–west exchange of eggs as a consequence of the stocks' differential...

  10. Atlantic menhaden adult tagging study

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Atlantic menhaden are a schooling forage fish species, which are subject to a large commercial purse seine fishery. Atlantic menhaden are harvested for reduction...

  11. AMMONIA AND COD REMOVAL FROM SYNTHETIC LEACHATE USING RICE HUSK COMPOSITE ADSORBENT

    Directory of Open Access Journals (Sweden)

    Azhar Abdul Halim

    2011-06-01

    Full Text Available Ammonia and chemical oxygen demand (COD were the most two problematic parameters in the landfill leachate. In this study, a new composite adsorbent derived from rice husk ash waste is evaluated with respect to its ability to remove these contaminants from synthetic leachate. Results indicate that the new composite adsorbent is able to adsorb both ammonia and COD. It has a higher adsorption capacity for ammonia (Q = 2.2578 mg/g and an almost equal adsorption capacity for COD (Q = 2.8893 when compared with commercially activated carbon. The adsorption kinetics of this new product for ammonia and COD were primarily represented by the pseudo second-order mechanism. The overall adsorption rate of the ammonia and COD adsorption processes appears to be determined by chemisorption process. The regenerated composite adsorbent indicated higher adsorption capacities of ammonia and COD, i.e. 12.9366 mg/g and 3.1162 mg/g, respectively.

  12. Prediction of selectivity from morphological conditions: Methodology and a case study on cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Herrmann, Bent; Krag, Ludvig Ahm; Frandsen, Rikke;

    2009-01-01

    The FISHSELECT methodology. tools, and software were developed and used to measure the morphological parameters that determine the ability of cod to penetrate different mesh types, sizes, and openings. The shape of one cross-section at the cod's head was found to explain 97.6% of the mesh penetra......-haul and the between-haul variations previously reported from sea trials. Finally, based on the results obtained, ideas to improve the size selection of cod in towed gear are presented....

  13. Reproduction and winter biology of polar cod Boreogadus saida from Svalbard waters

    OpenAIRE

    Korshunova, Ekaterina

    2012-01-01

    Polar cod (Boreogadus saida) is considered to be a key species in the Arctic marine ecosystems. Yet detailed or even basic knowledge regarding its biology and adaptations, especially during the polar night, are in many cases poor. No field data is presently available on the gonad development of polar cod, its reproductive biology and associated bioenergetics. Accordingly, polar cod was sampled at different locations in Svalbard waters in August, September, November and January. Gonadosomatic ...

  14. Externally driven mortality of cod early life stages in the central Baltic: hydrography vs. predation

    DEFF Research Database (Denmark)

    Neumann, Viola; Köster, Fritz; Schaber, Matthias;

    Cod (Gadus morhua L.) recruitment success in the central Baltic Sea is influenced by various abiotic and biotic factors, which include ambient salinity and oxygen conditions as well as predation pressure on early life stages by planktivore clupeids, such as sprat (Sprattus sprattus) and herring...... pressure by clupeids on the early life stages of cod could have enhanced cod recruitment in recent years. The analyses are based on a large dataset of stomach content of clupeids, cod egg abundances from ichthyoplankton surveys, and hydrographic measurements. We investigate temporal and spatial variability...

  15. Intense habitat-specific fisheries-induced selection at the molecular Pan I locus predicts imminent collapse of a major cod fishery.

    Directory of Open Access Journals (Sweden)

    Einar Arnason

    Full Text Available Predation is a powerful agent in the ecology and evolution of predator and prey. Prey may select multiple habitats whereby different genotypes prefer different habitats. If the predator is also habitat-specific the prey may evolve different habitat occupancy. Drastic changes can occur in the relation of the predator to the evolved prey. Fisheries exert powerful predation and can be a potent evolutionary force. Fisheries-induced selection can lead to phenotypic changes that influence the collapse and recovery of the fishery. However, heritability of the phenotypic traits involved and selection intensities are low suggesting that fisheries-induced evolution occurs at moderate rates at decadal time scales. The Pantophysin I (Pan I locus in Atlantic cod (Gadus morhua, representing an ancient balanced polymorphism predating the split of cod and its sister species, is under an unusual mix of balancing and directional selection including current selective sweeps. Here we show that Pan I alleles are highly correlated with depth with a gradient of 0.44% allele frequency change per meter. AA fish are shallow-water and BB deep-water adapted in accordance with behavioral studies using data storage tags showing habitat selection by Pan I genotype. AB fish are somewhat intermediate although closer to AA. Furthermore, using a sampling design covering space and time we detect intense habitat-specific fisheries-induced selection against the shallow-water adapted fish with an average 8% allele frequency change per year within year class. Genotypic fitness estimates (0.08, 0.27, 1.00 of AA, AB, and BB respectively predict rapid disappearance of shallow-water adapted fish. Ecological and evolutionary time scales, therefore, are congruent. We hypothesize a potential collapse of the fishery. We find that probabilistic maturation reaction norms for Atlantic cod at Iceland show declining length and age at maturing comparable to changes that preceded the collapse of

  16. Treatment of COD analysis liquid wastes generated in environmental laboratories

    Directory of Open Access Journals (Sweden)

    Tatiana Mañunga

    2010-08-01

    Full Text Available COD analysis is often carried out in environmental labs. Its wastes are considered hazardous due to the content of metals such as Cr, Ag and Hg; treating these wastes is considered complex and expensive. The experimental results of metal ion precipitation in COD wastes with affordable chemical products are reported in this work. Cr (VI was chemically reduced by adding 200 mg.L-1 of glucose to Cr (III. Final Cr (VI concentration was less than 0.5 mg.L-1. Cr (III was precipitated as a metallic hydroxide by adding NaOH and Ag was reduced to less than 0.2 mg.L-1 by adding 2 g.L-1 of NaCl. Hg was reduced to less than 0.005 mg.L-1 with 10 g.L-1 of FeS. The proposed reduction-precipitation methodology allowed minimising the liquid residue’s hazardous characteristics so that it complied with the maximum allowable values established in Chapter 6, Article 74 of Decree 1594/1984 that regulates the use of water and liquid residues.

  17. Invasion of the red seaweed Heterosiphonia japonica spans biogeographic provinces in the Western North Atlantic Ocean.

    Directory of Open Access Journals (Sweden)

    Christine Newton

    Full Text Available The recent invasion of the red alga Heterosiphonia japonica in the western North Atlantic Ocean has provided a unique opportunity to study invasion dynamics across a biogeographical barrier. Native to the western North Pacific Ocean, initial collections in 2007 and 2009 restricted the western North Atlantic range of this invader to Rhode Island, USA. However, through subtidal community surveys, we document the presence of Heterosiphonia in coastal waters from Maine to New York, USA, a distance of more than 700 km. This geographical distribution spans a well-known biogeographical barrier at Cape Cod, Massachusetts. Despite significant differences in subtidal community structure north and south of Cape Cod, Heterosiphonia was found at all but two sites surveyed in both biogeographic provinces, suggesting that this invader is capable of rapid expansion over broad geographic ranges. Across all sites surveyed, Heterosiphonia comprised 14% of the subtidal benthic community. However, average abundances of nearly 80% were found at some locations. As a drifting macrophyte, Heterosiphonia was found as intertidal wrack in abundances of up to 65% of the biomass washed up along beaches surveyed. Our surveys suggest that the high abundance of Heterosiphonia has already led to marked changes in subtidal community structure; we found significantly lower species richness in recipient communities with higher Heterosiphona abundances. Based on temperature and salinity tolerances of the European populations, we believe Heterosiphonia has the potential to invade and alter subtidal communities from Florida to Newfoundland in the western North Atlantic.

  18. Atlantic City memories.

    Science.gov (United States)

    Epstein, Franklin H

    2008-04-01

    Fifty years ago, the Atlantic City meetings, held the first week in May of every year, were attended by all the elite of American academic medicine and all who wanted to join that group. Part of the magic of those meetings was that professors and neophytes took each other seriously and talked to each other. PMID:18382726

  19. L’écodéveloppement participatif en question

    Directory of Open Access Journals (Sweden)

    Lucie Dejouhanet

    2010-03-01

    Full Text Available Si les politiques forestières indiennes ont évolué d’un paradigme directif à un paradigme participatif, les aires protégées sont encore gérées par des textes de loi qui privilégient la séparation entre activités humaines et espaces à protéger. L’écodéveloppement, soutenu par la Banque Mondiale, se voulait un moyen de favoriser des activités alternatives à l’exploitation des ressources et de faire participer les populations à la protection de leur environnement. Lancé en 2001 dans la réserve naturelle de Parambikulam au Kérala, ses résultats quelques années après sont peu concluants. Alors qu’un rapport de 2003 accuse le délitement social des populations concernées, cet article insiste davantage sur l’inadaptation des projets des comités d’écodéveloppement au contexte des villages ; le cliché essentialiste attaché aux populations adivasi constitue une vision a-historique qui ne permet pas de penser le développement aujourd’hui. L’écodéveloppement, s’il veut atteindre ses objectifs, doit permettre une réelle négociation entre acteurs des aires protégées et proposer des compromis réalistes entre limitation des activités et survie des populations.While Indian forest policies have evolved from a directive paradigm to a participative one, protected areas are still managed by legislative acts, which advocate a clear separation between human activities and areas to be protected. Eco-development financed by the World Bank was planned as a tool for developing alternative activities to resource exploitation and for involving local populations in environment protection through participation. Started in 2001 in the Wildlife Sanctuary of Parambikulam in Kerala, its results few years after are rather inconclusive. While a report in 2003 was accusing the social disintegration of concerned people, I am more stressing on the inappropriateness of EDC to villages’ context. The essentialist clich

  20. Hydrolysis of Marine Cod (Gadus Morhua) Head - Utilization of rest raw material from cod for production of ingredients for human consumption

    OpenAIRE

    Meldstad, Fataneh

    2015-01-01

    The main objective of this study was to determine the possibility of utilizing frozen marine cod head for further processing into high-quality and high-yield fish protein hydrolysates. The project included determination of the effect of mincing versus whole head, frozen storage and thawing methods on the composition and yield of FPH. The results show that freezing and thawing of cod head lead to small changes in the composition of raw material and consequently the resulting ...

  1. 75 FR 44938 - Atlantic Coastal Fisheries Cooperative Management Act Provisions; Atlantic Coastal Shark Fishery

    Science.gov (United States)

    2010-07-30

    ... National Oceanic and Atmospheric Administration RIN 0648-XX28 Atlantic Coastal Fisheries Cooperative Management Act Provisions; Atlantic Coastal Shark Fishery AGENCY: National Marine Fisheries Service (NMFS... Atlantic Coastal Fisheries Cooperative Management Act (Atlantic Coastal Act), based on the...

  2. Ribosomal RNA gene sequences confirm that protistan endoparasite of larval cod Gadus morhua is Ichthyodinium sp

    DEFF Research Database (Denmark)

    Skovgaard, Alf; Meyer, Stefan; Overton, Julia Lynne;

    2010-01-01

    An enigmatic protistan endoparasite found in eggs and larvae of cod Gadus morhua and turbot Psetta maxima was isolated from Baltic cod larvae, and DNA was extracted for sequencing of the parasite's small Subunit ribosomal RNA (SSU rRNA) gene. The endoparasite has previously been suggested...

  3. Characterization of the Escherichia coli codBA operon encoding cytosine permease and cytosine deaminase

    DEFF Research Database (Denmark)

    Danielsen, S; Kilstrup, M; Barilla, K;

    1992-01-01

    The nucleotide sequence of a 3.1 kb segment carrying the cytosine deaminase gene (codA) from Escherichia coli was determined. The sequence revealed the presence of two open reading frames, the first (codB) specifying a highly hydrophobic polypeptide and the second specifying cytosine deaminase. A...

  4. Lessons for fisheries management from the EU cod recovery plan

    DEFF Research Database (Denmark)

    Kraak, S.B.M.; Bailey, N.; Cardinale, M.;

    2013-01-01

    The performance of the EU long-term management plan for cod stocks, in force since 2009, is analysed focusing on the human and institutional factors. The plan operates through landings quotas (TACs) and effort restrictions following a Harvest Control Rule, and deploys a novel instrument allowing...... and real-time temporary closures. On the negative side, ignoring the dimension of fishers as reactive agents in the design, the impact assessment, and the annual implementation of the measures has contributed to the failure to adequately implement the plan and achieve its objectives. The main problem...... in targeted fisheries, although fishers experienced them as prohibiting the full uptake of other quotas. Recommendations for future plans include (i) management through catch rather than landings quotas, (ii) the internalisation of the costs of exceeding quotas, (iii) use of more selective gear types, (iv...

  5. Nutritional condition and vertical distribution of Baltic cod larvae

    DEFF Research Database (Denmark)

    Grønkjær, P.; Clemmesen, C.; St. John, Michael

    1997-01-01

    . To lest this hypothesis, Baltic cod larvae were sampled during the spawning seasons of 1994 and 1995 with depth-resolving multiple opening/closing nets. Each larva was aged by otolith readings and its RNA/DNA ratio was determined as a measure of nutritional condition. The RNA/DNA ratios of these larvae...... aged 2-25 days (median 10 days) ranged from 0.4 to 6.2, corresponding to levels exhibited by starving and fast growing larvae in laboratory calibration studies (starvation, protein growth rate, G(pi)=-12.2% day(-1); fast-growing larvae, G(pi)=14.1% day(-1)) respectively. Seventy per cent of the field...

  6. Linking lipid dynamics with the reproductive cycle in Baltic cod Gadus morhua

    DEFF Research Database (Denmark)

    Røjbek, Maria; Jacobsen, Charlotte; Tomkiewicz, Jonna;

    2012-01-01

    of Baltic cod from spring/early summer to midsummer since the early 1990s remain unresolved and may partly be diet related. This study demonstrated that a substantial amount of lipid was invested in cod ovarian development, and that lipid composition varied substantially with the reproductive cycle......This study describes lipid composition and antioxidants of Baltic cod Gadus morhua L. during the reproductive cycle, and investigates whether they reflect its dominant prey and whether levels of fatty acids important for reproductive performance were low. Reasons for a shift in peak spawning time...... in cod diet, while the level of 16:1n-7 and astaxanthin indicated the presence of the isopod Saduria entomon in cod diet. It is likely that food web alterations in the Baltic ecosystem related to environmental and hydrographic changes caused a decrease in ARA availability. Low ARA content coincides...

  7. Long-term effects of the transient COD concentration on the performance of microbial fuel cells.

    Science.gov (United States)

    Mateo, S; Gonzalez Del Campo, A; Lobato, J; Rodrigo, M; Cañizares, P; Fernandez-Morales, F J

    2016-07-01

    In this work, the long-term effects of transient chemical oxygen demands (COD) concentrations over the performance of a microbial fuel cell were studied. From the obtained results, it was observed that the repetitive change in the COD loading rate during 12 h conditioned the behavior of the system during periods of up to 7 days. The main modifications were the enhancement of the COD consumption rate and the exerted current. These enhancements yielded increasing Coulombic efficiencies (CEs) when working with COD concentrations of 300 mg/L, but constant CEs when working with COD concentrations from 900 to 1800 mg/L. This effect could be explained by the higher affinity for the substrate of Geobacter than that of the nonelectrogenic organisms such as Clostridia. © 2016 American Institute of Chemical Engineers Biotechnol. Prog., 32:883-890, 2016. PMID:27072066

  8. Micro geographical population structure of cod Gadus morhua in the North Sea and west of Scotland: the role of sampling loci and individuals

    DEFF Research Database (Denmark)

    Eg Nielsen, Einar; Wright, Peter John; Hansen, Jakob Hemmer;

    2009-01-01

    We investigated potential microgeographical population structure among spatial and temporal samples of cod Gadus morhua L., collected in the northern North Sea and around Scotland, using microsatellite genetic markers. Results were highly dependent on the samples and microsatellite loci included...... clear isolation of 2 samples collected at Viking and pairwise grouping of temporal adult samples from the same location. On a northeast Atlantic regional scale, inferences on local populations and patterns of population structuring were more robust to the inclusion of the microsatellite under selection....... However, while loci subject to selection may provide biased results in relation to identifying populations based on an evolutionary paradigm, they may prove valuable for separating populations on ecological time scales...

  9. [Influence of substrate COD on methane production in single-chambered microbial electrolysis cell].

    Science.gov (United States)

    Teng, Wen-Kai; Liu, Guang-Li; Luo, Hai-Ping; Zhang, Ren-Duo; Fu, Shi-Yu

    2015-03-01

    The chemical oxygen demand (COD) of substrate can affect the microbial activity of both anode and cathode biofilm in the single-chamber methanogenic microbial electrolysis cell (MEC). In order to investigate the effect of COD on the performance of MEC, a single chamber MEC was constructed with biocathode. With the change of initial concentration of COD (700, 1 000 and 1 350 mg x L(-1)), the methane production rate, COD removal and energy efficiency in the MEC were examined under different applied voltages. The results showed that the methane production rate and COD removal increased with the increasing COD. With the applied voltage changing from 0.3 to 0.7 V, the methane production rate increased at the COD of 700 mg x L(-1), while it increased at first and then decreased at the COD of 1000 mg x L(-1) and 1350 mg x L(-1). A similar trend was observed for the COD removal. The cathode potential reached the minimum (- 0.694 ± 0.001) V as the applied voltage was 0.5 V, which therefore facilitated the growth of methanogenic bacteria and improved the methane production rate and energy efficiency of the MEC. The maximum energy income was 0.44 kJ ± 0.09 kJ (1450 kJ x m(-3)) in the MEC, which was obtained at the initial COD of 1000 mg x L(-1) and the applied voltage of 0.5 V. Methanogenic MECs could be used for the treatment of wastewaters containing low organic concentrations to achieve positive energy production, which might provide a new method to recover energy from low-strength domestic wastewater.

  10. Investigation of the Effects of COD/TP Ratio on the Performance of a Biological Nutrient Removal System

    OpenAIRE

    Punrattanasin, Warangkana

    1997-01-01

    The laboratory-scale University of Cape Town (UCT) process was designed to investigate the effects of changing COD/TP ratios on the performance of biological nutrient removal (BNR) processes. Specific objectives of the research were to investigate the effects of COD/TP ratio on the rates of phosphorus removal, COD removal, nitrogen removal, PHB utilization and oxygen uptake. The system was fed with municipal wastewater and operated at 20° C. The influent COD concentration was held approximat...

  11. Thawed cod fillets spoil less rapidly than unfrozen fillets when stored under modified atmosphere at 2 C

    DEFF Research Database (Denmark)

    Guldager, H.S.; Bøknæs, Niels; Østerberg, Carsten;

    1998-01-01

    The effect of two months of frozen storage at -20 degrees C on the spoilage characteristics and shelf life of thawed and modified atmosphere packed (MAP) cod fillets stored at 2 degrees C was studied. Thawed MAP cod fillets were compared with fresh cod fillets stored in CO2-containing modified at...

  12. 78 FR 18896 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Cod by Catcher Vessels Less Than 60...

    Science.gov (United States)

    2013-03-28

    ... Economic Zone Off Alaska; Pacific Cod by Catcher Vessels Less Than 60 feet (18.3 meters) Length Overall... directed fishing for Pacific cod by catcher vessels less than 60 feet (18.3 meters (m)) length overall (LOA... cod for catcher vessels less than 60 feet (18.3 m) LOA using jig or hook-and-line gear in the...

  13. Two Distinct Roles of Atlantic SSTs in ENSO Variability: North Tropical Atlantic SST and Atlantic Nino

    Science.gov (United States)

    Ham, Yoo-Geun; Kug, Jong-Seong; Park, Jong-Yeon

    2013-01-01

    Two distinct roles of the Atlantic sea surface temperatures (SSTs), namely, the North Tropical Atlantic (NTA) SST and the Atlantic Nino, on the El Nino-Southern Oscillation (ENSO) variability are investigated using the observational data from 1980 to 2010 and coupled model experiments. It appears that the NTA SST and the Atlantic Nino can be used as two independent predictors for predicting the development of ENSO events in the following season. Furthermore, they are likely to be linked to different types of El Nino events. Specifically, the NTA SST cooling during February, March, and April contributes to the central Pacific warming at the subsequent winter season, while the negative Atlantic Nino event during June, July, and August contributes to enhancing the eastern Pacific warming. The coupled model experiments support these results. With the aid of a lagged inverse relationship, the statistical forecast using two Atlantic indices can successfully predict various ENSO indices.

  14. Effect of reflux ratio on COD and nitrogen removals from coke plant wastewaters.

    Science.gov (United States)

    Shi, X L; Hu, X B; Wang, Z; Ding, L L; Ren, H Q

    2010-01-01

    A laboratory-scale anaerobic-anoxic-aerobic-moving bed biofilm reactor (A1-A2-O-MBBR) system was undertaken to treat coke plant wastewaters from two different factories (wastewater A and B). Wastewater B had higher BOD5/COD ratio and COD/TN ratio than wastewater A. The effects of reflux ratios on COD, TN and NH3-N removals were studied. Results indicated that, with the reflux ratio increased from 2 to 5, COD removals of wastewater A and wastewater B increased from 57.4% to 72.6% and 78.2% to 88.6%, respectively. Meanwhile, TN removals were also increased accompanying reflux ratio rise, from 53.1% to 74.4% for wastewater A and 64.2% to 83.5% for wastewater B. At the same reflux ratio, compared with wastewater A, higher COD and TN removal efficiencies were observed in wastewater B, which had higher BOD5/COD and COD/TN ratio. Reflux ratio had no significant influence on NH3-N removal; 99.0% of the overall NH3-N removal efficiency was achieved by the system for both coke plant wastewaters at any tested reflux ratio. MBBR was effective in NH3-N removal, and about 95% of the NH3-N was removed in the MBBR. PMID:20555197

  15. A review of the battle for food in the Barents Sea: Cod vs. marine mammals

    Directory of Open Access Journals (Sweden)

    Bjarte eBogstad

    2015-03-01

    Full Text Available Cod, harp seal and minke whale are the main top predators in the Barents Sea ecosystem. In the last decade, the abundance of cod has increased considerably, and is at a record high level. In spite of this, the growth and condition of cod has remained rather stable, although some decrease is seen in size at age of large, mature cod. During the same period, the abundance of harp seals has declined whereas the minke whale stock has been at a stable level. The body condition (blubber thickness of these two mammal stocks has, however, decreased, with the strongest decrease observed for harp seals. A possible hypothesis for explaining this is that cod outperform the marine mammal stocks in the competition for food. The main advantages for cod are most likely larger availability of food (mainly capelin during winter-spring than for marine mammals, as well as a wider range of prey species being available to cod than to marine mammals. Harp seals are more dependent on prey items found close to the ice edge than the other two predator stocks are, which could partly explain why the performance of harp seals is worse than that of the two other main top predators in the area.

  16. Penentuan Kadar COD (Chemical Oxygen Demand) Pada Limbah Cair Pabrik Kelapa Sawit, Pabrik Karet Dan Domestik

    OpenAIRE

    Nurhasanah

    2009-01-01

    Telah dilakukan penentuan kadar COD pada limbah cair pabrik kelapa sawit, industri karet, dan domestik dengan metode titrimetri. Dari hasil analisa COD diperoleh kadar limbah kelapa sawit sebesar 206,33mg/l, limbah industri karet sebesar 31,74 mg/l, dan limbah domestik sebesar 162,68 mg/l. dimana menurut Standart baku mutu yang telah ditetapkan oleh Menteri Lingkungan Hidup Nomor: Kep-51/MENLH/10/1995, kadar maksimum COD dalam air limbah industri kelapa sawit sebesar 350 mg/l, dalam indust...

  17. Sensory characteristics of different cod products related to consumer preferences and attitudes

    DEFF Research Database (Denmark)

    Sveinsdottir, K.; Martinsdottir, E.; Green-Petersen, Ditte;

    2009-01-01

    Quantitative descriptive analysis (QDA) was used to analyse the sensory quality of eight cod products, different with regard to origin (wild/farmed), Storage time (short/extended) and Storage method (fresh/frozen/packed in modified atmosphere). At the same time, 378 consumers in four European...... the liking in terms of different consumer attitudes and demographics. The QDA discriminated well between the products. The farmed cod products Were considerably different from wild cod, with More light and even colour, meaty texture, odour and flavour. Country differences were considerable with regard...

  18. Microgeographical population structure and adaptation in Atlantic cod Gadus morhua: spatio-temporal insights from gene-associated DNA markers

    DEFF Research Database (Denmark)

    Poulsen, Nina Aagaard; Hemmer-Hansen, Jakob; Loeschcke, V.;

    2011-01-01

    Recent technical advances have stimulated studies on spatial scales of adaptive genetic variation in marine fishes. However, very few studies have combined spatial and temporal sampling to investigate adaptive genetic structuring at local and microgeographical scales, i.e. scales at which neutral...

  19. The Effects of Temperature, Hypoxia and Hypercapnia on the Metabolism of Atlantic Cod Gadus morhua

    DEFF Research Database (Denmark)

    Tirsgård, Bjørn

    species can survive in relatively high dissolved CO2 concentrations (hypercapnia) (Crocker and Cech, 1996; McKenzie et al., 2003), long-term exposure to sub-lethal environmental hypercapnia is known to affect growth, feed conversion efficiency and body condition index (Smart, 1981; Fivelstad et al., 1998...

  20. Characterization of Francisella sp., GM2212, the first Francisella isolate from marine fish, Atlantic cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Ottem, Karl F; Nylund, Are; Karlsbakk, Egil;

    2007-01-01

    from F. tularensis and F. philomiragia. GM2212(T) is catalase-positive, indole positive, oxidase-negative, do not produce H(2)S in Triple Sugar Iron agar, and does not hydrolyze gelatin, is resistant to erythromycin and susceptible to ceftazidime, the latter five characteristics separating it from F...

  1. Large effective population size and temporal genetic stability in Atlantic cod (Gadus morhua) in the southern Gulf of St. Lawrence

    DEFF Research Database (Denmark)

    Therkildsen, Nina Overgaard; Eg Nielsen, Einar; Swain, Douglas P.;

    2010-01-01

    Worldwide, many commercial fish stocks have experienced dramatic declines due to overfishing. Such fisheries-induced population reductions could potentially erode the genetic diversity of marine fish populations. Based on analyses of DNA extracted from archived and contemporary samples, this paper...

  2. POP induced oxidative stress and its effect on fatty acid composition in Atlantic Cod (Gadus morhua) mitochondria

    OpenAIRE

    Tveit, Anne Mari

    2010-01-01

    The North Sea is becoming heavily contaminated by organic pollutants. The dominating sources of contamination are land-based releases, transport and offshore oil and gas industry. This creates a complex spectrum of different persistent contaminants accumulating in the fish in the North Sea. The dominating pollutants are Persistent Organic Pollutants (POPs) such as organic chlorinated (PCB, DDT), brominated (PBDE) and fluorinated (PFOS) compounds from industrial waste products. There are also ...

  3. Growth of juvenile Atlantic cod Gadus morhua in land-based recirculation systems: Effects of feeding regime, photoperiod and diet

    DEFF Research Database (Denmark)

    Fülberth, Michael; Moran, Damian; Jarlbæk, Henrik;

    2009-01-01

    . Three RAS units were used to simultaneously test three feed/photoperiod regimes that might be encountered in the wild or aquaculture; LightDark (LD) 24:0, LD12:11 (+ 1 h crepuscular periods) and LD6:6 (+ 12 h crepuscular periods). Feed was administered during the light period every 30 min for a 3 min...... feeding duration. In each RAS unit three diets (A, B and C) were tested, which were broadly similar in composition but from different manufacturers. Water exchange rate averaged 10–19% in the three recirculation systems, and key water quality parameters such as NH4+ and CO2 remained at low effect...

  4. Reconstructing historical stock development of Atlantic cod (Gadus morhua) in the eastern Baltic Sea before the beginning of intensive exploitation

    DEFF Research Database (Denmark)

    Eero, Margit; Köster, Fritz; MacKenzie, Brian

    2008-01-01

    mortality before the 1940s was below 0.2, but reached moderate levels during the Second World War. The stock size before the war may be considered as a reference level of biomass at low fishing impact, providing important information for the management of fisheries and the Baltic ecosystem....

  5. Pulse trawl fishing: characteristics of the electrical stimulation and the effect on behaviour and injuries of Atlantic cod (Gadus morhua)

    NARCIS (Netherlands)

    Haan, de D.; Fosseidengen, J.E.; Fjelldal, P.G.; Burggraaf, D.; Rijnsdorp, A.D.

    2016-01-01

    In the North Sea flatfish fishery, electric pulse trawls have been introduced to replace the conventional mechanical method. Pulse trawls reduce the fuel consumption, reduce adverse impact on the ecosystem but cause injuries in gadoids. We describe the design and electrical properties of pulse trawl

  6. What is the carrying capacity for fish in the ocean? A meta analysis of population dynamics of North Atlantic cod

    DEFF Research Database (Denmark)

    Myers, R.A.; MacKenzie, Brian; Bowen, K.G.;

    2001-01-01

    Population and community data in one study are usually analyzed in isolation from other data. Here, we introduce statistical methods that allow many data sets to be analyzed simultaneously such that different studies may "borrow strength" from each other. In the simplest case, we simultaneously m...

  7. Cod and rainbow trout as freeze-chilled meal elements

    DEFF Research Database (Denmark)

    Jensen, Louise Helene Søgaard; Nielsen, Jette; Jørgensen, Bo;

    2010-01-01

    Meal elements' are elements of a meal, e.g. portions of pre-fried meat, sauces, frozen fish or pre-processed vegetables typically prepared industrially. The meal elements are distributed to professional satellite kitchens, where the staff can combine them into complete meals. Freeze-chilling is a......Meal elements' are elements of a meal, e.g. portions of pre-fried meat, sauces, frozen fish or pre-processed vegetables typically prepared industrially. The meal elements are distributed to professional satellite kitchens, where the staff can combine them into complete meals. Freeze......-chilling is a process consisting of freezing and frozen storage followed by thawing and chilled storage. Combining the two would enable the manufacturer to produce large quantities of frozen meal elements to be released into the chill chain according to demand. We have studied the influence of freeze...... and cod and rainbow trout seem potential candidates for freeze-chilled meal elements. (C) 2009 Society of Chemical Industry...

  8. Developing Baltic cod recruitment models I : Resolving spatial and temporal dynamics of spawning stock and recruitment for cod, herring, and sprat

    DEFF Research Database (Denmark)

    Köster, Fritz; Möllmann, C.; Neuenfeldt, Stefan;

    2001-01-01

    to resolve species-specific regional reproductive success in relation to size, structure, and distribution of the spawning stock. Furthermore, as species and fisheries interactions vary between areas, it is necessary to include these interactions on an area-specific basis. Therefore, area......-disaggregated multispecies virtual population analyses (MSVPA) were performed for interacting species cod, herring (Clupea harengus), and sprat in the different subdivisions of the Central Baltic. The MSVPA runs revealed distinct spatial trends in population abundance, spawning biomass, recruitment, and predation......-induced mortality. Results, when evaluated with respect to trends in population sizes from research surveys, were similar for the cod and sprat stocks but different for herring. Horizontal distributions from MSVPA runs and research surveys indicate that cod and sprat undergo migrations between basins during...

  9. Slave to the rhythm: seasonal signals in otolith microchemistry reveal age of eastern Baltic cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Hüssy, Karin; Gröger, J.; Heidemann, F.;

    2016-01-01

    Annual growth zones in cod otoliths from the eastern Baltic stock are less discrete than in other cod stocks leading to biased age reading, which recently led to a failure of age-based assessment in the eastern Baltic cod stock. In this study, we explored the applicability of minor and trace...... element patterns in cod otoliths for age determination. By first identifying elements of interest in a stock without ageing problems, western Baltic cod, we then tested their applicability on another stock without ageing problems, North Sea cod, and finally applied this knowledge to estimate age of......, the same patterns in Cu, Zn, Rb, Mg, and Mn signals occurred. All eastern Baltic cod with low visual contrast between growth zones exhibited clearly defined synchronous cycles in Cu, Zn, Rb and Pb. Using a combined finite differencing method and structural break models approach, the statistical...

  10. Long term operation of continuous-flow system with enhanced biological phosphorus removal granules at different COD loading.

    Science.gov (United States)

    Li, Dong; Lv, Yufeng; Zeng, Huiping; Zhang, Jie

    2016-09-01

    In this study, a continuous-flow system with enhanced biological phosphorus removal (EBPR) granules was operated at different COD concentrations (200, 300 and 400mgL(-)(1)) to investigate the effect of COD loading on this system. The results showed that when the COD concentration in influent was increased to 400mgL(-)(1), the anaerobic COD removal efficiency and total phosphorus removal efficiency reduced obviously and the settling ability of granules deteriorated due to the proliferation of filamentous bacteria. Moreover, high COD loading inhibited the EPS secretion and destroyed the stability of granules. Results of high-through pyrosequencing indicated that filamentous bacteria had a competitive advantage over polyphosphate-accumulating organisms (PAOs) at high COD loading. The performance of system, settling ability of granules and proportion of PAOs gradually recovered to the initial level after the COD concentration was reduced to 200mgL(-)(1) on day 81. PMID:27295254

  11. 77 FR 9852 - Special Regulations; Areas of the National Park System, Cape Cod National Seashore

    Science.gov (United States)

    2012-02-21

    .... DATES: This rule is effective March 22, 2012. FOR FURTHER INFORMATION CONTACT: Craig Thatcher, Acting... primary authors of this regulation were Craig Thatcher, Acting Chief Ranger, Cape Cod National...

  12. Groundwater contributing areas for Cape Cod and the Plymouth-Carver Regions of Massachusetts

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This data layer contains groundwater contributing areas for streams, ponds and estuaries in the Cape Cod and the Plymouth-Carver region. Contributing areas were...

  13. Trimmed Processed Continuous Resistivity Point Data from Cape Cod National Seashore, May 17-20, 2004

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Continuous resistivity profiling (CRP) surveys were conducted at Cape Cod National Seashore in 2004 and 2006 in order to test hypotheses about groundwater flow...

  14. Trimmed Processed Continuous Resistivity Point Data from Cape Cod National Seashore, Feb. 28, 2006

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Continuous resistivity profiling (CRP) surveys were conducted at Cape Cod National Seashore in 2004 and 2006 in order to test hypotheses about groundwater flow...

  15. Processed Continuous Resistivity Point Data from Cape Cod National Seashore, May 17-20, 2004

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Continuous resistivity profiling (CRP) surveys were conducted at Cape Cod National Seashore in 2004 and 2006 in order to test hypotheses about groundwater flow...

  16. Processed Continuous Resistivity Point Data from Cape Cod National Seashore, Feb. 28, 2006

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Continuous resistivity profiling (CRP) surveys were conducted at Cape Cod National Seashore in 2004 and 2006 in order to test hypotheses about groundwater flow...

  17. Continuous Resistivity Profile Tracklines of Data Collected from Cape Cod National Seashore, Feb. 28, 2006

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Continuous resistivity profiling (CRP) surveys were conducted at Cape Cod National Seashore in 2004 and 2006 in order to test hypotheses about groundwater flow...

  18. AFSC/REFM: Pacific cod genetics in the Aleutian Islands 2004-2007

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Landscape genetics of Pacific cod Gadus macrocephalus within the Bering Sea and Aleutian Islands (BSAI) management area of Alaska was examined in samples from nine...

  19. Bedrock Data from Western Cape Cod, Massachusetts (WELLSITE shapefile, Geographic, NAD27)

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Cores collected from recent drilling in western Cape Cod, Massachusetts provide insight into the topography and petrology of the underlying bedrock. Cores from 64...

  20. Coastal Vulnerability Index (CVI) for Cape Cod National Seashore (caco_shore)

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — A coastal vulnerability index (CVI) was used to map the relative vulnerability of the coast to future sea-level rise within Cape Cod National Seashore in...

  1. Time for Fishing: Bargaining Power in the Baltic Swedish Cod Fishery

    OpenAIRE

    Blomquist , Johan; Hammarlund, Cecilia; Waldo, Staffan

    2013-01-01

    How are market conditions affected by a change in fishery regulations? Who benefits and who loses? The paper discusses the price effects of a reform in the Swedish Baltic cod fishery where vessels using active gear were given annual quotas rather than the previously applied quarterly quotas. We investigate whether the bargaining power of fishers using trawlers have improved after the reform using a difference-in-difference approach. Since fishers have more freedom to fish for cod over the yea...

  2. Removal of Sulfide and COD from a Crude Oil Wastewater Model by Aluminum and Iron Electrocoagulation

    Directory of Open Access Journals (Sweden)

    K. I. Dermentzis

    2016-04-01

    Full Text Available The treatment of petroleum wastewater was studied using the electrocoagulation process with aluminum and iron electrodes aiming to simultaneous removal of sulfide and COD. All affecting parameters, such as solution pH, applied current density, time of electroprocessing, electrode material and addition of surfactant, were investigated. Sulfide was rapidly and effectively removed using iron electrodes. The removal of COD was effectively effectively enhanced by performing the electrocoagulation process after addition of the surfactant polyethylene glycol oleate.

  3. Photocatalysis applied in the studies of decolorization and COD removal of landfill leachate

    Directory of Open Access Journals (Sweden)

    Gisselma Batista

    2014-10-01

    Full Text Available In this paper photocatalysis processes on titanium dioxide suspension in aqueous solution illuminated with UV light are described for decolorization and Chemical Oxygen Demand (COD removal of landfill leachate. Several operational parameters to achieve optimum efficiency are presented. The properties of the decolorization and COD removal were enhanced and studied by spectrophotometer methods. The results indicate that the process can be used as a pretreatment to the conventional processes.

  4. COD and Color Removal from Textile Wastewater Using Rosa damascena Watering Waste Ash

    Directory of Open Access Journals (Sweden)

    Rabbani D.1 PhD,

    2015-01-01

    Full Text Available Aims Several methods have been used for textile wastewater treatment. The aim of this study was to evaluate the efficiency of Rosa damascena watering waste ash for COD and color removal from textile wastewater. Materials & Methods Rose watering waste was gathered from one of the Kashan processing plants. The raw wastewater sample was taken from one of the textile industries in Kashan countryside. All experiments were run in the fixed volume (1L of textile wastewater, contact times (15, 30, 45, 60, 75, and 90min, pHs (3, 5, 7, and 9 and different doses of rose watering waste (500, 1000, 2000, and 4000mg at the room temperature (25°C. Moreover, biosorption kinetic studies for COD were done using the pseudo first and pseudo second order models. Findings The amount of COD and color removal were increased by contact time increasing from 15 to 60min and the maximum removal of COD (50.3% and color (31.4% were seen at minute 60. Therefore, the contact time of 60min was chosen as the optimum contact time for the first step. The maximum amount of COD (51.9% and color (32.9% removal were seen at pH=5 and biosorbent dose of 2000mg. Changes at pH and biosorbent dose had significant effects (p<0.05 on amount of COD and color removal. Conclusion The optimum condition for removing COD and color from textile wastewater is at contact time 60min, pH=5 and biosorbent dose of 2000mg. Rosa damascena watering waste ash was more effective on the COD removal than the color.

  5. Impact of hypoxia on consumption of Baltic cod in a multispecies stock assessment context

    DEFF Research Database (Denmark)

    Teschner, E.C.; Kraus, G.; Neuenfeldt, Stefan;

    2010-01-01

    The Baltic Sea is characterised by a heterogeneous oceanographic environment. The deep water layers forming the habitat of Baltic cod (Gadus morhua callarias L.) are subjected to frequently occurring pronounced anoxic conditions. Adverse oxygen conditions result in physiological stress for organi......The Baltic Sea is characterised by a heterogeneous oceanographic environment. The deep water layers forming the habitat of Baltic cod (Gadus morhua callarias L.) are subjected to frequently occurring pronounced anoxic conditions. Adverse oxygen conditions result in physiological stress...

  6. Hydroacoustic ex situ target strength measurements on juvenile cod ( Gadus morhua L.)

    DEFF Research Database (Denmark)

    Nielsen, J. Rasmus; Lundgren, Bo

    1999-01-01

    ) and length of live juvenile cod (7-10 cm and 15-20 cm) at 120 kHz. This was done by recording the variation in TS of freely swimming cod tracking single fish targets for the two size groups within the acoustic beam held. The experiment was set up in an open air 2000 m(3) tank where the small 5-10 cm long...

  7. Evaluation of COD effect on anammox process and microbial communities in the anaerobic baffled reactor (ABR).

    Science.gov (United States)

    Chen, Chongjun; Sun, Faqian; Zhang, Haiqing; Wang, Jianfang; Shen, Yaoliang; Liang, Xinqiang

    2016-09-01

    Nitrogen removal with different organic carbon effect was investigated using anaerobic baffled reactor (ABR) anammox reactor. Results indicated that organic carbon exert an important effect on nitrogen removal through anammox process. When the feeding COD concentration was lower than 99.7mgL(-1), nitrogen removal could be enhanced via the coexistence of denitrification and anammox. Elevated COD could further deteriorate the anammox activity with almost complete inhibition at the COD concentration of 284.1mgL(-1). The nitrogen removal contribution rate of anammox was varied from 92.7% to 6.9%. However, the anammox activity was recovered when the COD/TN was decreased from 2.33 to 1.25 with influent nitrite addition. And, the anammox process was again intensified from 27.0 to 51.2%. High-throughput Miseq sequencing analyses revealed that the predominant phylum changed from Chloroflexi to Proteobacteria with the elevated COD addition, which indicated COD concentration was the most important factor regulating the bacterial community structure. PMID:27285572

  8. Effect of wastewater COD/N ratio on aerobic nitrifying sludge granulation and microbial population shift

    Institute of Scientific and Technical Information of China (English)

    Lei Wu; Chengyao Peng; Yongzhen Peng; Lingyun Li; Shuying Wang; Yong Ma

    2012-01-01

    The effect of COD/N ratio on the granulation process and microbial population succession was investigated.Four identical sequencing batch reactors,R1,R2,R3 and R4,were operated with various initial COD/N ratios ranging from 0/200 to 800/200 (m/n).Ethanol was fed as the source of COD.Aerobic granules were successfully cultivated in R2 and R3,operating with the COD/N ratio of 200/200 and 400/200,respectively.Scanning electron microscope observations indicated that short rod-shaped and spherical bacteria were dominant in R2,while granules produced in R3 were surrounded with a large amount of filamentous bacteria.The average specific nitritation rate in R2 and R3 were 0.019 and 0.008 mg N/(mg MLVSS.hr),respectively.Fluorescence in situ hybridization results demonstrated that nitrifying bacteria population was enriched remarkably in R2.It indicated that nitrification ability and nitrifying bacteria population were enriched remarkably at low COD/N ratio.However,no granules were formed in R1and R4 which might attribute to either limited or excessive extracellular polymeric substances production.This study contributed to a better understanding of the role of COD/N ratio in nitrifying sludge granulation.

  9. Estimation of the maximum allowable loading amount of COD in Luoyuan Bay by a 3-D COD transport and transformation model

    Science.gov (United States)

    Wu, Jialin; Li, Keqiang; Shi, Xiaoyong; Liang, Shengkang; Han, Xiurong; Ma, Qimin; Wang, Xiulin

    2014-08-01

    The rapid economic and social developments in the Luoyuan and Lianjiang counties of Fujian Province, China, raise certain environment and ecosystem issues. The unusual phytoplankton bloom and eutrophication, for example, have increased in severity in Luoyuan Bay (LB). The constant increase of nutrient loads has largely caused the environmental degradation in LB. Several countermeasures have been implemented to solve these environmental problems. The most effective of these strategies is the reduction of pollutant loadings into the sea in accordance with total pollutant load control (TPLC) plans. A combined three-dimensional hydrodynamic transport-transformation model was constructed to estimate the marine environmental capacity of chemical oxygen demand (COD). The allowed maximum loadings for each discharge unit in LB were calculated with applicable simulation results. The simulation results indicated that the environmental capacity of COD is approximately 11×104 t year-1 when the water quality complies with the marine functional zoning standards for LB. A pollutant reduction scheme to diminish the present levels of mariculture- and domestic-based COD loadings is based on the estimated marine COD environmental capacity. The obtained values imply that the LB waters could comply with the targeted water quality criteria. To meet the revised marine functional zoning standards, discharge loadings from discharge units 1 and 11 should be reduced to 996 and 3236 t year-1, respectively.

  10. Dispersal routes and habitat utilization of juvenile Atlantic bluefin tuna, Thunnus thynnus, tracked with mini PSAT and archival tags.

    Directory of Open Access Journals (Sweden)

    Benjamin Galuardi

    Full Text Available Between 2005 and 2009, we deployed 58 miniature pop-up satellite archival tags (PSAT and 132 implanted archival tags on juvenile Atlantic bluefin tuna (age 2-5 in the northwest Atlantic Ocean. Data returned from these efforts (n = 26 PSATs, 1 archival tag revealed their dispersal routes, horizontal and vertical movements and habitat utilization. All of the tagged bluefin tuna remained in the northwest Atlantic for the duration observed, and in summer months exhibited core-use of coastal seas extending from Maryland to Cape Cod, MA, (USA out to the shelf break. Their winter distributions were more spatially disaggregated, ranging south to the South Atlantic Bight, northern Bahamas and Gulf Stream. Vertical habitat patterns showed that juvenile bluefin tuna mainly occupied shallow depths (mean= 5-12 m, sd = 15-23.7 m and relatively warm water masses in summer (mean= 17.9-20.9°C, sd= 4.2-2.6°C and had deeper and more variable depth patterns in winter (mean= 41-58 m, sd= 48.9-62.2 m. Our tagging results reveal annual dispersal patterns, behavior and oceanographic associations of juvenile Atlantic bluefin tuna that were only surmised in earlier studies. Fishery independent profiling from electronic tagging also provide spatially and temporally explicit information for evaluating dispersals rates, population structure and fisheries catch patterns.

  11. Effects of COD to Phosphorus Ratios on the Metabolism of PAOs in Enhanced Biological Phosphorus Removal with Different Carbon Sources

    Institute of Scientific and Technical Information of China (English)

    Tao Jiang; Junguo He; Xiaonan Yang; Jianzheng Li

    2015-01-01

    To elucidate the phosphorus removal and metabolism under various COD/P ratio, a sludge highly enriched in PAOs was used to investigate the impacts of COD/P in batch tests under different carbon supply conditions. Acetate, propionate and a mixture of acetate and propionate at a ratio of 3 ∶ 1 ( COD basis) was used as carbon sources with the COD/P of 20, 15,10 and 5�0 gCOD/gP, respectively. The minimum COD/P ratios for complete P removal were found to be 8�24 gCOD/gP for acetate, 11�40 gCOD/gP for propionate and 9�10 gCOD/gP for the 3 ∶ 1 mixture of acetate and propionate. Converted to a mass basis, all three cases had a very similar ratio of 7�7 gVFA/gP, which represented a useful guide for operation of EBPR plants to identify possible shortages inVFAs. The trend in PHV accumulation during the anaerobic period along with the decrease of COD/P ratios suggested that, PAOs may use the TCA pathway for anaerobic VFA uptake to maintain the required NADH production with reduced glycogen degradation. During the aerobic phase, the glycogen pool was reduced but remained enough compared to the requirement for anaerobic VFA uptake, and the synthesis and degradation of glycogen was not the inhibition factor of PAOs.

  12. 75 FR 22103 - Atlantic Coastal Fisheries Cooperative Management Act Provisions; Atlantic Coastal Shark Fishery

    Science.gov (United States)

    2010-04-27

    ... National Oceanic and Atmospheric Administration RIN 0648-XV13 Atlantic Coastal Fisheries Cooperative Management Act Provisions; Atlantic Coastal Shark Fishery AGENCY: National Marine Fisheries Service (NMFS...-compliance; Declaration of a moratorium. SUMMARY: In accordance with the Atlantic Coastal...

  13. Atlantic Offshore Seabird Dataset Catalog

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Several bureaus within the Department of Interior compiled available information from seabird observation datasets from the Atlantic Outer Continental Shelf into a...

  14. Atlantic Flyway Sea Duck Survey

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — The Atlantic Flyway Sea Duck Survey, conducted from 1991 to 2002 by the U.S. Fish and Wildlife Service, was established to record sea duck numbers using near shore...

  15. Virginia Atlantic Coast Recreational Use

    Data.gov (United States)

    Virginia Department of Environmental Quality — As a member of the Mid-Atlantic Regional Council on the Ocean (MARCO), Virginia, through its Coastal Zone Management (CZM) Program, collected information on how the...

  16. VA Atlantic Coast Recreational Use

    Data.gov (United States)

    Virginia Department of Environmental Quality — As a member of the Mid-Atlantic Regional Council on the Ocean (MARCO), Virginia, through its Coastal Zone Management (CZM) Program, collected information on how the...

  17. Atlantic Flyway Breeding Waterfowl Survey

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — The Atlantic Flyway Technical Section initiated this breeding waterfowl survey in 11 northeast states ranging from New Hampshire to Virginia.

  18. EFFEKTIFITAS SARINGAN BIOFILTER ANAEROB DAN AEROB DALAM MENURUNKAN KADAR BOD5, COD DAN NITROGEN TOTAL LIMBAH CAIR INDUSTRI KARET

    OpenAIRE

    Hasanuddin, ishak; Hatijah; Seweng, Arifin

    2008-01-01

    This study was aimed to 1) compare effectiveness of aerobic and anaerob biofilters in reducing BOD5, COD, and Total Nitrogen levels, 2) examine the interaction between immersion times and biofilter medium in reducing BOD5, COD and Total Nitrogen levels. This study was an experimental study using biofilters of brick fraction and data analysis was permormed using ANOVE tes. Study result indicated that anaerobic and aerobic biofilters medium were effective in reducing BOD5, COD and Totall Nitrog...

  19. Relation between habitat characteristics and abundance, diet and condition of 0-group cod in two northern Norwegian fjords

    OpenAIRE

    Heggland, Kristin Nymark

    2013-01-01

    There is a correlation between the vegetation coverage and the abundance of 0-group cod. The highest abundance was found between 50 – 70 %, which is consistent with previous studied and imply that there is a nonlinear relationship between vegetation coverage and abundance of 0-group cod. There was found a difference in diet between the three habitats, with the intertidal zones of Balsfjord and Porsangerfjord having a diet significantly higher diversity than the 0-group cod in the pelagic zone...

  20. Systems Level Analyses Reveal Multiple Regulatory Activities of CodY Controlling Metabolism, Motility and Virulence in Listeria monocytogenes

    OpenAIRE

    Lior Lobel; Herskovits, Anat A.

    2016-01-01

    Bacteria sense and respond to many environmental cues, rewiring their regulatory network to facilitate adaptation to new conditions/niches. Global transcription factors that co-regulate multiple pathways simultaneously are essential to this regulatory rewiring. CodY is one such global regulator, controlling expression of both metabolic and virulence genes in Gram-positive bacteria. Branch chained amino acids (BCAAs) serve as a ligand for CodY and modulate its activity. Classically, CodY was c...

  1. Characteristics of juvenile survivors reveal spatio-temporal differences in early life stage survival of Baltic cod

    DEFF Research Database (Denmark)

    Huwer, Bastian; Hinrichsen, H.H.; Böttcher, U.;

    2014-01-01

    The spatio-temporal origin of surviving juvenile Baltic cod Gadus morhua was investigated by coupling age information from otolith microstructure analysis and hydrodynamic modeling, which allowed backtracking of drift routes in time and space. The suitability of hydrodynamic modeling for drift si...... of Baltic cod, in particular with respect to the critical period and match-mismatch hypotheses, and to possible implications for the placement of a Marine Protected Area which was established to ensure undisturbed spawning of Baltic cod....

  2. Stable isotope evidence for late medieval (14th-15th C) origins of the eastern Baltic cod (Gadus morhua) fishery

    DEFF Research Database (Denmark)

    Orton, D.C.; Makowiecki, D.; de Roo, T.;

    2011-01-01

    Although recent historical ecology studies have extended quantitative knowledge of eastern Baltic cod (Gadus morhua) exploitation back as far as the 16th century, the historical origin of the modern fishery remains obscure. Widespread archaeological evidence for cod consumption around the eastern...... of a substantial late medieval fishery. Potential human impact on cod stocks in the eastern Baltic must thus be taken into account for at least the last 600 years...

  3. The effect of pH and operation mode for COD removal of slaughterhouse wastewater with Anaerobic Batch Reactor (ABR

    Directory of Open Access Journals (Sweden)

    Maria Octoviane Dyan

    2015-01-01

    Full Text Available Disposal of industrial wastes in large quantities was not in accordance with today's standards of waste into environmental issues that must be overcome with proper treatment. Similarly, the abattoir wastewater that contains too high organic compounds and suspended solids. The amount of liquid waste disposal Slaughterhouse (SW with high volume also causes pollution. The research aim to resolve this problem by lowering the levels of BOD-COD to comply with effluent quality standard. Anaerobic process is the right process for slaughterhouse wastewater treatment because of high content of organic compounds that can be utilized by anaerobic bacteria as a growth medium. Some research has been conducted among abattoir wastewater treatment using anaerobic reactors such as ABR, UASB and ASBR. Our research focuses on the search for the optimum results decline effluent COD levels to match the quality standards limbah and cow rumen fluid with biodigester ABR (Anaerobic Batch Reactor. The variables used were PH of 6, 7, and 8, as well as the concentration ratio of COD: N is 400:7; 450:7, and 500:7. COD value is set by the addition of N derived from urea [CO(NH2 2]. COD levels will be measured daily by water displacement technique. The research’s result for 20 days seen that optimum PH for biogas production was PH 7,719 ml. The optimum PH for COD removal is PH 6, 72.39 %. The operation mode COD:N for biogas production and COD removal is 500:7, with the production value is 601 ml and COD removal value is 63.85 %. The research’s conclusion, the PH optimum for biogas production was PH 7, then the optimum PH for COD removal is PH 6. The optimum operation mode COD:N for biogas production and COD removal was 500:7

  4. COD and BOD reduction from coffee processing wastewater using Avacado peel carbon.

    Science.gov (United States)

    Devi, Rani; Singh, Vijender; Kumar, Ashok

    2008-04-01

    The aim of this study was the assessment of reduction of chemical oxygen demand (COD) and biological oxygen demand (BOD) of wastewater from coffee processing plant using activated carbon made up of Avacado Peels. The complete study was done in batch mode to investigate the effect of operating parameters. The results of the COD and BOD concentration reduction with avocado peel carbon (APC) and commercial activated carbon (CAC) were compared and optimum operating conditions were determined for maximum reduction. Adsorption isotherm was also studied besides the calculation of optimum treatment parameters for maximum reduction of COD and BOD concentration from effluent of the coffee processing plant. The maximum percentage reduction of COD and BOD concentration under optimum operating conditions using APC was 98.20% and 99.18% respectively and with CAC this reduction was 99.02% and 99.35% respectively. As the adsorption capacity of APC is comparable with that of CAC for reduction of COD and BOD concentration, it could be a lucrative technique for treatment of domestic wastewater generated in decentralized sectors. PMID:17493806

  5. PENURUNAN BOD DAN COD LIMBAH CAIR INDUSTRI TEKSTIL DI KABUPATEN PEKALONGAN DENGAN METODE MULTI SOIL LAYERING

    Directory of Open Access Journals (Sweden)

    Irmanto

    2008-11-01

    Full Text Available Multi Soil Layering (MSL system is a method of wastewater treatment that increase the soils function to purify wastewater. In the construction of MSL, soils mixed with the charcoal and then filled into the box of size 50x14x50 cm in layers structured like brick pattern. The aims of this research are to determine the concentration of BOD and COD on textile industrial wastewater before and after the process by MSL method. It also determines the optimal loading rate of wastewater on the MSL system, and then it can determine the efficiency of MSL system on reducing the concentration of BOD and COD on textile industrial wastewater. The method which used in this research is an experimental method. The wastewater on the MSL system is loaded on the loading rate variety: 160, 320, 480, 640, and 800 L m-2 day-1. The efficiency of MSL system to removing BOD and COD on textile industrial wastewater are determined on optimal loading rate. The research gave result that MSL method could remove BOD and COD on textile industrial wastewater on the optimal loading rate 320 L m-2 day-1. The efficiency of MSL system in removing BOD and COD on textile industrial wastewater are 96.52 and 80.87% respectively. This indicated that the method MSL serve the purpose of effective alternative method in processing of liquid waste textile industry.

  6. Multi-decadal responses of a cod (Gadus morhua) population to human-induced trophic changes, fishing, and climate

    DEFF Research Database (Denmark)

    Eero, Margit; MacKenzie, Brian; Köster, Fritz;

    2011-01-01

    significant climate-driven variations in cod recruitment production at multi-annual timescales, which had major impacts on population dynamics and the yields to commercial fisheries. We also quantify the roles of marine mammal predation, eutrophication, and exploitation on the development of the cod......-average cod productivity coupled to a temporary reduction in fishing pressure. The Baltic cod example demonstrates how combinations of different forcings can have synergistic effects and consequently dramatic impacts on population dynamics. Our results highlight the potential and limitations of human...

  7. Environmentally driven predator-prey overlaps determine the aggregate diet of the cod Gadus morhua in the Baltic Sea

    DEFF Research Database (Denmark)

    Neuenfeldt, Stefan; Beyer, Jan

    2006-01-01

    of oxygenated and saline deep water alternating with stagnation periods affect the consumption rates of the herring Clupea harengus L. and the sprat Sprattus sprattus L. by the cod Gadus morhua in the Bornholm basin of the Baltic Sea. We developed conceptual models for the effect of predator-prey overlaps...... on the aggregate diet of the predator population to test the hypothesis that the effects of inflows on the aggregate diet are mediated by changes in cod-clupeid overlaps. After estimating salinity and oxygen thresholds of the spatial distributions of cod and clupeids and calculating cod-clupeid overlaps from March...

  8. Effects of Technological Parameters and Fishing Ground on Quality Attributes of Thawed, Chilled Cod Fillets Stored in Modified Atmosphere Packaging

    DEFF Research Database (Denmark)

    Bøknæs, Niels; Østerberg, Carsten; Sørensen, Rie;

    2001-01-01

    Effects were studied of various technological parameters and fishing ground on quality attributes of thawed, chilled cod fillets stored in modified atmosphere packaging Frozen fillets of Baltic Sea and Barents Sea cod, representing two commercial fishing grounds, were used as raw material...... of Baltic Sea cod. Therefore, addition of trimethylamine oxide and NaCl to Baltic Sea cod fillets was evaluated and shown to protect P, phosphoreum against fro::en storage inactivation and this explained the observed differences in growth of the spoilage bacteria and trimethylamine production between thawed...

  9. APPLICATION OF ELECTROCHEMICAL METHODS FOR DECREASING OF CHEMICAL OXYGEN DEMAND (COD) AND TOTAL SUSPENDED SOLID (TSS) OF TOFU INDUSTRIAL WASTEWATER

    OpenAIRE

    Suyata; Irmanto; Undri Rastuti

    2015-01-01

    Tofu industrial wastewater has high COD and TSS level, which it cause an environmental pollution. Therefore, it is necessary to decrease the value of COD and TSS of tofu industrial wastewater before discharge into the water body. Decreasing of COD and TSS values can be carried out using an electrochemical method. The purpose of this research was to determine the effect of potential, electrode distance, pH, and time to decrease of COD and TSS value of the tofu industrial wastewater. The experi...

  10. Stable isotope evidence for late medieval (14th-15th C origins of the eastern Baltic cod (Gadus morhua fishery.

    Directory of Open Access Journals (Sweden)

    David C Orton

    Full Text Available Although recent historical ecology studies have extended quantitative knowledge of eastern Baltic cod (Gadus morhua exploitation back as far as the 16th century, the historical origin of the modern fishery remains obscure. Widespread archaeological evidence for cod consumption around the eastern Baltic littoral emerges around the 13th century, three centuries before systematic documentation, but it is not clear whether this represents (1 development of a substantial eastern Baltic cod fishery, or (2 large-scale importation of preserved cod from elsewhere. To distinguish between these hypotheses we use stable carbon and nitrogen isotope analysis to determine likely catch regions of 74 cod vertebrae and cleithra from 19 Baltic archaeological sites dated from the 8th to the 16th centuries. δ(13C and δ(15N signatures for six possible catch regions were established using a larger sample of archaeological cod cranial bones (n = 249. The data strongly support the second hypothesis, revealing widespread importation of cod during the 13th to 14th centuries, most of it probably from Arctic Norway. By the 15th century, however, eastern Baltic cod dominate within our sample, indicating the development of a substantial late medieval fishery. Potential human impact on cod stocks in the eastern Baltic must thus be taken into account for at least the last 600 years.

  11. Impact of dispersed fuel oil on cardiac mitochondrial function in polar cod Boreogadus saida.

    Science.gov (United States)

    Dussauze, Matthieu; Camus, Lionel; Le Floch, Stéphane; Pichavant-Rafini, Karine; Geraudie, Perrine; Coquillé, Nathalie; Amérand, Aline; Lemaire, Philippe; Theron, Michael

    2014-12-01

    In this study, impact of dispersed oil on cardiac mitochondrial function was assessed in a key species of Arctic marine ecosystem, the polar cod Boreogadus saida. Mature polar cod were exposed during 48 h to dispersed oil (mechanically and chemically) and dispersants alone. The increase observed in ethoxyresorufin-O-deethylase activity and polycyclic aromatic hydrocarbon metabolites in bile indicated no difference in contamination level between fish exposed to chemical or mechanical dispersion of oil. Oil induced alterations of O2 consumption of permeabilised cardiac fibres showing inhibitions of complexes I and IV of the respiratory chain. Oil did not induce any modification of mitochondrial proton leak. Dispersants did not induce alteration of mitochondrial activity and did not increase oil toxicity. These data suggest that oil exposure may limit the fitness of polar cod and consequently could lead to major disruption in the energy flow of polar ecosystem.

  12. Trophodynamic control on recruitment success in Baltic cod : the influence of cannibalism

    DEFF Research Database (Denmark)

    Neuenfeldt, Stefan; Köster, Fritz

    2000-01-01

    Cod is the top piscivore predator in the Baltic Sea ecosystem. Based on stomach content data from 62427 cod collected during 1977-1994 and food consumption rates, cannibalism in the Eastern and Western Baltic cod stocks has been quantified using multispecies virtual population analysis. In the...... Eastern Baltic stock, depending on model assumptions, an average of 25-38% of the 0-group and 11-17% of the 1-group were removed by predation by adults. Thus, between age 0 and age 2 a year class may lose on average about 31% and 44% of the initial number as a result of cannibalism. Cannibalism is lower......, stock, recruitment, and cannibalism declined steadily until the early 1990s and then increased again. Problems identified in relation to data compilation and estimation procedure are discussed with respect to their impact on estimates of cannibalism and stock- recruitment relationships. (C) 2000...

  13. Study on Migration and Transformation Rule of Organic Pollutants (COD) in Aerated Zone

    Institute of Scientific and Technical Information of China (English)

    2003-01-01

    Collecting waste water with a certain concentration of organic pollutants COD (chemical oxygen demand), static adsorption, static biodegradation and dynamic soil column experiments were made in laboratory, we researched migration and transformation of COD in aerated zone, and put forward a mathematical model showing the process. The results show that adsorption of organism in aerated zone is linear, which is represented by Henry's law s=Kdc+sd, adsorption coefficient Kd =0. 069 3;biodegradation diagram accord basically with first-order kinetics equation c=c0e-K1t , biodegradation coefficient K1 = 0. 049 9 d-1; dispersion coefficient D= 0. 002 42 m2/d in experiments. The migration and transformation of organic pollutants (COD) in aerated zone jointly result from many factors such as dispersion, adsorption and biodegradation etc..

  14. Cape Cod Aquifer Management Project (CCAMP): demonstration of a geographic information system for ground water protection

    Energy Technology Data Exchange (ETDEWEB)

    Steppacher, L.

    1988-09-01

    This publication summarizes the application of GIS Technology to the project. Geographic Information systems (GIS) technology has the capability of overlaying various mapped data layers, determining distances from fixed points, automatic changing of map scales, and preparing maps from tabular point data to better understand the complex issues involved in decision making. GIS was used for a series of pilot analyses for Cape Cod. The work concentrated on the development of a digital data base and assessment at three different geographic levels of analysis: (1) the zone of contribution to nine public water-supply wells in a highly urbanized area; (2) a rural, seasonally populated, summer tourist town; and (3) the Cape Cod peninsula. The project was designed to raise issues and answer the types of ground water management questions being asked on Cape Cod, but also those faced by ground water managers in other areas of the country as well.

  15. Stock recruitment relationships for cod ( Gadus morhua L.) in the central Baltic Sea incorporating environmental variability

    DEFF Research Database (Denmark)

    Jarre, Astrid; Wieland, Kai; MacKenzie, Brian;

    2000-01-01

    egg development ('reproductive volume'); (ii) the age-structure of the spawning stock; (iii) the timing of spawning; and (iv) predation mortality on eggs due to sprat (Sprattus sprattus) and herring (Clupea harengus), as well as cod cannibalism. We relate recruitment at age 2 to parent stock size...... using updated time series of these variables, comprising the period 1966 to 1994. Spawning stock biomass and egg production are compared as measures of parent stock size. The influence of wind energy and zooplankton abundance on cod recruitment are discussed. A modified Ricker model is outlined......Recruitment of central/eastern Baltic cod critically depends on favourable oceanographic conditions in the deeper basins of the Baltic Sea creating a suitable habitat for the development of early life stages. The decline in the size of the spawning stock since the mid-1980s initiated a series...

  16. COD Removal Efficiencies of Some Aromatic Compounds in Supercritical Water Oxidation

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    Some aromatic compounds, phenol, aniline and nitrobenzene, were oxidized in supercritical water. It was experimentally found that the chemical oxygen demand (COD) removal efficiency of these organic compounds can achieve a high level more than 90% in a short residence time at temperatures high enough. As temperature, pressure and residence time increase, the COD removal efficiencies of the organic compounds would all increase. It is also found that temperature and residence time offer greater influences on the oxidation process than pressure. The difficulty in oxidizing these three compounds is in the order of nitrobenzene > aniline > Phenol. In addition, it is extremely difficult to oxidize aniline and nitrobenzene to CO2 and H2O at the temperature lower than 873.15 K and 923.15 K, respectively. Only at the temperature higher than 873.15 K and 923.15 K, respectively, the COD removal efficiencies of 90% of aniline and nitrobenzene can be achieved.

  17. Inhibition of haemoglobin-mediated lipid oxidation in washed cod muscle and cod protein isolates by Fucus vesiculosus extract and fraction

    DEFF Research Database (Denmark)

    Wang, Tao; Jonsdottir, Rosa; Kristinsson, Hordur;

    2010-01-01

    The effects of Fucus vesiculosus extract and fractions towards haemoglobin- (Hb-) catalysed lipid oxidation in washed cod muscle system and cod protein isolates during ice storage were examined. The extract and fractions were characterised in terms of total phlorotannin content (TPC), 2,2-diphenyl......-1-picrylhydrazyl (DPPH) radical scavenging activity, ferrous ion-chelating ability and reducing power. Progression of oxidation was followed by determining rancid odour, thiobarbituric acid reactive substances (TBARS), redness and volatile oxidation compounds by gas chromatography (GC). In both...... the initiation of lipid peroxidation in both systems throughout the entire study period (8 days). Its effectiveness at 300 mg/kg level was comparable to that of 100 mg/kg propyl gallate (PG), a highly effective synthetic antioxidant in muscle foods. Although polymeric phlorotannin-rich subfraction (LH-5) had...

  18. Spatio-temporal variability of the North Sea cod recruitment in relation to temperature and zooplankton.

    Directory of Open Access Journals (Sweden)

    Delphine Nicolas

    Full Text Available The North Sea cod (Gadus morhua, L. stock has continuously declined over the past four decades linked with overfishing and climate change. Changes in stock structure due to overfishing have made the stock largely dependent on its recruitment success, which greatly relies on environmental conditions. Here we focus on the spatio-temporal variability of cod recruitment in an effort to detect changes during the critical early life stages. Using International Bottom Trawl Survey (IBTS data from 1974 to 2011, a major spatio-temporal change in the distribution of cod recruits was identified in the late 1990s, characterized by a pronounced decrease in the central and southeastern North Sea stock. Other minor spatial changes were also recorded in the mid-1980s and early 1990s. We tested whether the observed changes in recruits distribution could be related with direct (i.e. temperature and/or indirect (i.e. changes in the quantity and quality of zooplankton prey effects of climate variability. The analyses were based on spatially-resolved time series, i.e. sea surface temperature (SST from the Hadley Center and zooplankton records from the Continuous Plankton Recorder Survey. We showed that spring SST increase was the main driver for the most recent decrease in cod recruitment. The late 1990s were also characterized by relatively low total zooplankton biomass, particularly of energy-rich zooplankton such as the copepod Calanus finmarchicus, which have further contributed to the decline of North Sea cod recruitment. Long-term spatially-resolved observations were used to produce regional distribution models that could further be used to predict the abundance of North Sea cod recruits based on temperature and zooplankton food availability.

  19. Bacterial Colonization of Cod (Gadus morhua L.) and Halibut (Hippoglossus hippoglossus) Eggs in Marine Aquaculture

    Science.gov (United States)

    Hansen, Geir Høvik; Olafsen, Jan A.

    1989-01-01

    Aquaculture has brought about increased interest in mass production of marine fish larvae. Problems such as poor egg quality and mass mortality of fish larvae have been prevalent. The intensive incubation techniques that often result in bacterial overgrowth on fish eggs could affect the commensal relationship between the indigenous microflora and opportunistic pathogens and subsequently hamper egg development, hatching, larval health, and ongrowth. Little information about the adherent microflora on fish eggs is available, and the present study was undertaken to describe the microbial ecology during egg development and hatching of two fish species of potential commercial importance in marine aquaculture. Attachment and development of the bacterial flora on cod (Gadus morhua L.) eggs from fertilization until hatching was studied by scanning electron microscopy. The adherent microflora on cod (G. morhua L.) and halibut (Hippoglossus hippoglossus) eggs during incubation was characterized and grouped by cluster analysis. Marked bacterial growth could be demonstrated 2 h after fertilization, and at hatching eggs were heavily overgrown. Members of the genera Pseudomonas, Alteromonas, Aeromonas, and Flavobacterium were found to dominate on the surface of both cod and halibut eggs. The filamentous bacterium Leucothrix mucor was found on eggs from both species. While growth of L. mucor on halibut eggs was sparse, cod eggs with a hairy appearance due to overgrowth by this bacterium close to hatching were frequently observed. Vibrio fischeri could be detected on cod eggs only, and pathogenic vibrios were not detected. Members of the genera Moraxella and Alcaligenes were found only on halibut eggs. Caulobacter and Seliberia spp. were observed attached to eggs dissected from cod ovaries under sterile conditions, indicating the presence of these bacteria in ovaries before spawning. Adherent strains did not demonstrate antibiotic resistance above a normal level. Attempts to

  20. Cod liver oil consumption at different periods of life and bone mineral density in old age.

    Science.gov (United States)

    Eysteinsdottir, Tinna; Halldorsson, Thorhallur I; Thorsdottir, Inga; Sigurdsson, Gunnar; Sigurdsson, Sigurdur; Harris, Tamara; Launer, Lenore J; Gudnason, Vilmundur; Gunnarsdottir, Ingibjorg; Steingrimsdottir, Laufey

    2015-07-01

    Cod liver oil is a traditional source of vitamin D in Iceland, and regular intake is recommended partly for the sake of bone health. However, the association between lifelong consumption of cod liver oil and bone mineral density (BMD) in old age is unclear. The present study attempted to assess the associations between intake of cod liver oil in adolescence, midlife, and old age, and hip BMD in old age, as well as associations between cod liver oil intake in old age and serum 25-hydroxyvitamin D (25(OH)D) concentration. Participants of the Age, Gene/Environment Susceptibility-Reykjavik Study (age 66-96 years; n 4798), reported retrospectively cod liver oil intake during adolescence and midlife, as well as the one now in old age, using a validated FFQ. BMD of femoral neck and trochanteric region was measured by volumetric quantitative computed tomography, and serum 25(OH)D concentration was measured by means of a direct, competitive chemiluminescence immunoassay. Associations were assessed using linear regression models. No significant association was seen between retrospective cod liver oil intake and hip BMD in old age. Current intake of aged men was also not associated with hip BMD, while aged women with daily intakes had z-scores on average 0.1 higher, compared with those with an intake of aged participants was positively associated with serum 25(OH)D: individuals with intakes of < once/week, one to six time(s)/week and daily intake had concentrations of approximately 40, 50 and 60 nmol/l respectively (P for trend < 0.001).

  1. Lipid and fatty acid compositions of cod ( Gadus morhua), haddock ( Melanogrammus aeglefinus) and halibut ( Hippoglossus hippoglossus)

    Science.gov (United States)

    Zeng, Duan; Mai, Kangsen; Ai, Qinghui; Milley, Joyce E.; Lall, Santosh P.

    2010-12-01

    This study was conducted to compare lipid and fatty acid composition of cod, haddock and halibut. Three groups of cod (276 g ± 61 g), haddock (538 g ± 83 g) and halibut (3704 g ± 221 g) were maintained with commercial feeds mainly based on fish meal and marine fish oil for 12 weeks prior to sampling. The fatty acid compositions of muscle and liver were determined by GC/FID after derivatization of extracted lipids into fatty acid methyl esters (FAME). Lipids were also fractionated into neutral and polar lipids using Waters silica Sep-Pak?. The phospholipid fraction was further separated by high-performance thin-layer chromatography (HPTLC) and the FAME profile was obtained. Results of the present study showed that cod and haddock were lean fish and their total muscle lipid contents were 0.8% and 0.7%, respectively, with phospholipid constituting 83.6% and 87.5% of the total muscle lipid, respectively. Halibut was a medium-fat fish and its muscle lipid content was 8%, with 84% of the total muscle lipid being neutral lipid. Total liver lipid contents of cod, haddock and halibut were 36.9%, 67.2% and 30.7%, respectively, of which the neutral lipids accounted for the major fraction (88.1%-97.1%). Polyunsaturated fatty acids were the most abundant in cod and haddock muscle neutral lipid. Monounsaturated fatty acid level was the highest in halibut muscle neutral lipid. Fatty acid compositions of phospholipid were relatively constant. In summary, the liver of cod and haddock as lean fish was the main lipid reserve organ, and structural phospholipid is the major lipid form in flesh. However, as a medium-fat fish, halibut stored lipid in both their liver and muscle.

  2. Role of Branched-Chain Amino Acid Transport in Bacillus subtilis CodY Activity

    OpenAIRE

    Belitsky, Boris R.

    2015-01-01

    CodY is a branched-chain amino acid-responsive transcriptional regulator that controls the expression of several dozen transcription units in Bacillus subtilis. The presence of isoleucine, valine, and leucine in the growth medium is essential for achieving high activity of CodY and for efficient regulation of the target genes. We identified three permeases—BcaP, BraB, and BrnQ—that are responsible for the bulk of isoleucine and valine uptake and are also involved in leucine uptake. At least o...

  3. Spatial and temporal distribution of Pacific cod Gadus macrocephalus juveniles in Mutsu Bay, Japan

    OpenAIRE

    Takatsu, Tetsuya; Yoshida, Yasuyuki; KOOKA, Kouji; Sugimoto, Kouichi; Takahashi, Toyomi

    2001-01-01

    The spatial distributions of Pacific cod (Gadus macrocephalus) juveniles and their food organisms were examined in Mutsu Bay from April to July during 1988-1997. In April, large larvae (≤25 mm in total length (TL)) and pelagic juveniles (>25 mm TL) were widely distributed in the bay, and were concentrated at the same depths as calanoid copepodites during daylight hours. Geographical changes in cod TLs might have been due to transport by the Tsugaru Warm Current. After mid- and late May, juven...

  4. Modeling the cod larvae drift in the Bornholm Basin in summer 1994

    DEFF Research Database (Denmark)

    Hinrichsen, H.H.; Lehmann, A.; St. John, Michael;

    1997-01-01

    A combined 3-D physical oceanographic model and a field sampling program was performed in July and August 1994 to investigate the potential drift of larval Baltic cod from the center of spawning effort in the Bornholm Basin, Baltic Sea. The goal of this exercise was to predict the drift......-dimensional eddy-resolving baroclinic model of the Baltic Sea based on the Bryan-Cox-Semtner code. Larval drift was simulated by the incorporation of a passive tracer into the model utilized to represent individual cod larvae. Additionally, simulated Lagrangian drift trajectories are presented. For model purposes...

  5. Degradation of ATP and glycogen in cod ( Gadus morhua ) muscle during freezing

    DEFF Research Database (Denmark)

    Cappeln, Gertrud; Jessen, Flemming

    2001-01-01

    Changes in ATP, IMP, lactate and glycogen contents in the muscle of cod were followed during freezing at temperatures of -20C and -45C. ATP degradation was accompanied by a corresponding increase in IMP content. Simultaneous measurement of temperature showed that at both freezing rates......, the greatest decrease in ATP content was observed when the temperature reached -0.8C. Glycolysis occurred during freezing of cod as indicated by an increase in lactate content. The changes found in all measured metabolites were more pronounced when freezing was performed at a slow rate compared to a fast rate...

  6. 78 FR 59878 - Atlantic Highly Migratory Species; Commercial Atlantic Aggregated Large Coastal Shark (LCS...

    Science.gov (United States)

    2013-09-30

    ... management groups is closed, even across fishing years. On July 3, 2013 (78 FR 40318), NMFS announced the... Species; Commercial Atlantic Aggregated Large Coastal Shark (LCS), Atlantic Hammerhead Shark, Atlantic Blacknose Shark, and Atlantic Non-Blacknose Small Coastal Shark (SCS) Management Groups AGENCY:...

  7. Systems Level Analyses Reveal Multiple Regulatory Activities of CodY Controlling Metabolism, Motility and Virulence in Listeria monocytogenes.

    Science.gov (United States)

    Lobel, Lior; Herskovits, Anat A

    2016-02-01

    Bacteria sense and respond to many environmental cues, rewiring their regulatory network to facilitate adaptation to new conditions/niches. Global transcription factors that co-regulate multiple pathways simultaneously are essential to this regulatory rewiring. CodY is one such global regulator, controlling expression of both metabolic and virulence genes in Gram-positive bacteria. Branch chained amino acids (BCAAs) serve as a ligand for CodY and modulate its activity. Classically, CodY was considered to function primarily as a repressor under rich growth conditions. However, our previous studies of the bacterial pathogen Listeria monocytogenes revealed that CodY is active also when the bacteria are starved for BCAAs. Under these conditions, CodY loses the ability to repress genes (e.g., metabolic genes) and functions as a direct activator of the master virulence regulator gene, prfA. This observation raised the possibility that CodY possesses multiple functions that allow it to coordinate gene expression across a wide spectrum of metabolic growth conditions, and thus better adapt bacteria to the mammalian niche. To gain a deeper understanding of CodY's regulatory repertoire and identify direct target genes, we performed a genome wide analysis of the CodY regulon and DNA binding under both rich and minimal growth conditions, using RNA-Seq and ChIP-Seq techniques. We demonstrate here that CodY is indeed active (i.e., binds DNA) under both conditions, serving as a repressor and activator of different genes. Further, we identified new genes and pathways that are directly regulated by CodY (e.g., sigB, arg, his, actA, glpF, gadG, gdhA, poxB, glnR and fla genes), integrating metabolism, stress responses, motility and virulence in L. monocytogenes. This study establishes CodY as a multifaceted factor regulating L. monocytogenes physiology in a highly versatile manner. PMID:26895237

  8. Systems Level Analyses Reveal Multiple Regulatory Activities of CodY Controlling Metabolism, Motility and Virulence in Listeria monocytogenes.

    Directory of Open Access Journals (Sweden)

    Lior Lobel

    2016-02-01

    Full Text Available Bacteria sense and respond to many environmental cues, rewiring their regulatory network to facilitate adaptation to new conditions/niches. Global transcription factors that co-regulate multiple pathways simultaneously are essential to this regulatory rewiring. CodY is one such global regulator, controlling expression of both metabolic and virulence genes in Gram-positive bacteria. Branch chained amino acids (BCAAs serve as a ligand for CodY and modulate its activity. Classically, CodY was considered to function primarily as a repressor under rich growth conditions. However, our previous studies of the bacterial pathogen Listeria monocytogenes revealed that CodY is active also when the bacteria are starved for BCAAs. Under these conditions, CodY loses the ability to repress genes (e.g., metabolic genes and functions as a direct activator of the master virulence regulator gene, prfA. This observation raised the possibility that CodY possesses multiple functions that allow it to coordinate gene expression across a wide spectrum of metabolic growth conditions, and thus better adapt bacteria to the mammalian niche. To gain a deeper understanding of CodY's regulatory repertoire and identify direct target genes, we performed a genome wide analysis of the CodY regulon and DNA binding under both rich and minimal growth conditions, using RNA-Seq and ChIP-Seq techniques. We demonstrate here that CodY is indeed active (i.e., binds DNA under both conditions, serving as a repressor and activator of different genes. Further, we identified new genes and pathways that are directly regulated by CodY (e.g., sigB, arg, his, actA, glpF, gadG, gdhA, poxB, glnR and fla genes, integrating metabolism, stress responses, motility and virulence in L. monocytogenes. This study establishes CodY as a multifaceted factor regulating L. monocytogenes physiology in a highly versatile manner.

  9. Atlantic menhaden processing plant test tagging data

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Atlantic menhaden are a schooling forage fish species, which are subject to a large commercial purse seine fishery. Atlantic menhaden are harvested for reduction...

  10. Atlantic NAD 83 OCS Planning Areas

    Data.gov (United States)

    Bureau of Ocean Energy Management, Department of the Interior — This data set contains BOEM Planning Area outlines in ESRI shapefile format for the BOEM Atlantic Region. The old Atlantic Planning Area outlines were changed as of...

  11. The North Atlantic Oscillation in the Atlantic-European SLP*

    OpenAIRE

    GLOWIENKA-HENSE, RITA

    2011-01-01

    An analysis of the signature of the North Atlantic Oscillation (NAO) in the Atlantic-European sea level pressure (SLP) is presented for observed (German Weather Service) and ECMWF T21 model data. The former time series consists of 1881–1984 January to December fields and the latter of 42 monthly fields from 3 permanent January simulations. The NAO is shown to be one of the dominant eigenmodes of SLP for all calendar months. A very similar NAO anomaly pattern is filtered from the T21 model dat...

  12. Atlantic Seaduck Project

    Science.gov (United States)

    Perry, M.C.; Hanson, Alan; Kerekes, Joseph; Paquet, Julie

    2006-01-01

    Atlantic Seaduck Project is being conducted to learn more about the breeding and moulting areas of seaducks in northern Canada and more about their feeding ecology on wintering areas, especially Chesapeake Bay. Satellite telemetry is being used to track surf scoters wintering in Chesapeake Bay, Maryland and black scoters on migrational staging areas in New Brunswick, Canada to breeding and moulting areas in northern Canada. Various techniques used to capture the scoters included mist netting, night-lighting, and net capture guns. All captured ducks were transported to a veterinary hospital where surgery was conducted following general anaesthesia procedures. A PTT100 transmitter (39 g) manufactured by Microwave, Inc., Columbia, Maryland was implanted into the duck?s abdominal cavity with an external (percutaneous) antenna. Eight of the surf scoters from Chesapeake Bay successfully migrated to possible breeding areas in Canada and all 13 of the black scoters migrated to suspected breeding areas. Ten of the 11 black scoter males migrated to James Bay presumably for moulting. Updated information from the ARGOS Systems aboard the NOAA satellites on scoter movements was made accessible on the Patuxent Website. Habitat cover types of locations using GIS (Geographical Information Systems) and aerial photographs (in conjunction with remote sensing software) are currently being analyzed to build thematic maps with varying cosmetic layer applications. Many factors related to human population increases have been implicated in causing changes in the distribution and abundance of wintering seaducks. Analyses of the gullet (oesophagus and proventriculus) and the gizzard of seaducks are currently being conducted to determine if changes from historical data have occurred. Scoters in the Bay feed predominantly on the hooked mussel and several species of clams. The long-tailed duck appears to select the gem clam in greater amounts than other seaducks, but exhibits a diverse diet of

  13. Atlantic CFC data in CARINA

    Directory of Open Access Journals (Sweden)

    R. Steinfeldt

    2010-01-01

    Full Text Available Water column data of carbon and carbon-relevant parameters have been collected and merged into a new database called CARINA (CARbon IN the Atlantic. In order to provide a consistent data set, all data have been examined for systematic biases and adjusted if necessary (secondary quality control (QC. The CARINA data set is divided into three regions: the Arctic/Nordic Seas, the Atlantic region and the Southern Ocean. Here we present the CFC data for the Atlantic region, including the chlorofluorocarbons CFC-11, CFC-12 and CFC-113 as well as carbon tetrachloride (CCl4. The methods applied for the secondary quality control, a crossover analyses, the investigation of CFC ratios in the ocean and the CFC surface saturation are presented. Based on the results, the CFC data of some cruises are adjusted by a certain factor or given a "poor'' quality flag.

  14. Atlantic versus Indo-Pacific influence on Atlantic-European climate

    OpenAIRE

    Pohlmann, Holger; Latif, Mojib

    2005-01-01

    The influence of the Atlantic and Indo-Pacific oceans on Atlantic-European climate is investigated by analyzing ensemble integrations with the atmospheric general circulation model ECHAM4 forced by anomalous sea surface temperature and sea ice conditions restricted to the Atlantic (AOGA) and Indo-Pacific (I+POGA) oceans. The forcing from both the Indo-Pacific and Atlantic oceans are important for the generation of the sea level pressure (SLP) variability in the Atlantic region in the boreal w...

  15. A spectrum of CodY activities drives metabolic reorganization and virulence gene expression in Staphylococcus aureus.

    Science.gov (United States)

    Waters, Nicholas R; Samuels, David J; Behera, Ranjan K; Livny, Jonathan; Rhee, Kyu Y; Sadykov, Marat R; Brinsmade, Shaun R

    2016-08-01

    The global regulator CodY controls the expression of dozens of metabolism and virulence genes in the opportunistic pathogen Staphylococcus aureus in response to the availability of isoleucine, leucine and valine (ILV), and GTP. Using RNA-Seq transcriptional profiling and partial activity variants, we reveal that S. aureus CodY activity grades metabolic and virulence gene expression as a function of ILV availability, mediating metabolic reorganization and controlling virulence factor production in vitro. Strains lacking CodY regulatory activity produce a PIA-dependent biofilm, but development is restricted under conditions that confer partial CodY activity. CodY regulates the expression of thermonuclease (nuc) via the Sae two-component system, revealing cascading virulence regulation and factor production as CodY activity is reduced. Proteins that mediate the host-pathogen interaction and subvert the immune response are shut off at intermediate levels of CodY activity, while genes coding for enzymes and proteins that extract nutrients from tissue, that kill host cells, and that synthesize amino acids are among the last genes to be derepressed. We conclude that S. aureus uses CodY to limit host damage to only the most severe starvation conditions, providing insight into one potential mechanism by which S. aureus transitions from a commensal bacterium to an invasive pathogen. PMID:27116338

  16. Impact of the herbicide (RS)-MCPP on an anaerobic membrane bioreactor performance under different COD/nitrate ratios.

    Science.gov (United States)

    Yuzir, Ali; Chelliapan, Shreeshivadasan; Sallis, Paul J

    2012-04-01

    The degradation of (RS)-MCPP was investigated in an anaerobic membrane bioreactor (AnMBR) using nitrate as an available electron acceptor under different COD/NO(3)(-)-N ratios. Results showed high soluble COD removal efficiency (80-93%) when the reactor was operated at high COD/NO(3)(-)-N ratios. However, the COD removal started to decline (average 15%) at high nitrate concentrations coinciding with a drop in nitrate removal efficiency to 37%, suggesting that the denitrification activity dropped and affected the AnMBR performance when nitrate was the predominant electron acceptor. Additionally, the removal efficiency of (RS)-MCPP increased from 2% to 47% with reducing COD/NO(3)(-)-N ratios, whilst the (RS)-MCPP specific utilisation rate (SUR) was inversely proportional to the COD/NO(3)(-)-N ratio, suggesting that a lower COD/NO(3)(-)-N ratios had a positive influence on the (RS)-MCPP SUR. Although nitrate had a major impact on methane production rates, the methane composition was stable (approximately 80%) for COD/NO(3)(-)-N ratios of 23 or more. PMID:22318083

  17. CodY, a pleiotropic regulator, influences multicellular behaviour and efficient production of virulence factors in Bacillus cereus

    NARCIS (Netherlands)

    Lindback, Toril; Mols, Maarten; Basset, Coraline; Granum, Per Einar; Kuipers, Oscar P.; Kovacs, Akos T.; Lindbäck, Toril

    2012-01-01

    In response to nutrient limitation in the environment, the global transcriptional regulator CodY modulates various pathways in low G+C Gram-positive bacteria. In Bacillus subtilis CodY triggers adaptation to starvation by secretion of proteases coupled to the expression of amino acid transporters. F

  18. An abundance estimate of ling ( Molva molva ) and cod ( Gadus morhua ) in the Skagerrak and the northeastern North Sea, 1872

    DEFF Research Database (Denmark)

    Poulsen, R.T.; Cooper, A.B.; Holm, P.;

    2007-01-01

    during the late 1990s-early 2000s. Dominating ling size has also declined since the late 19th century. The estimated historic abundance of cod in the Skagerrak and northeastern North Sea is similar to present abundance of cod in these areas but its spatial distribution has contracted. These changes...

  19. Larval and small juvenile cod Gadus morhua concentrated in the highly productive areas of a shelf break front

    DEFF Research Database (Denmark)

    Munk, Peter; Larsson, P.O.; Danielsen, D.;

    1995-01-01

    and the aggregations extended as a continuous band along the front. We suggest that the observed concurrence between a hydrographic front and cod larvae/juveniles is a general and recurrent phenomenon based on the spawning habits of cod and aggregation due to flow convergence at the front....

  20. Membrane bioreactors fed with different COD/N ratio wastewater: impacts on microbial community, microbial products, and membrane fouling.

    Science.gov (United States)

    Han, Xiaomeng; Wang, Zhiwei; Ma, Jinxing; Zhu, Chaowei; Li, Yaxin; Wu, Zhichao

    2015-08-01

    It is known that an increase of COD/N ratio can result in an enhanced removal of nutrients in membrane bioreactors (MBRs); however, impacts of doing so on membrane filtration performance remain unclear. In this work, comparison of membrane filtration performance, microbial community, and microbial products under low temperature was carried out in anoxic/oxic (A/O) MBRs with COD/N ratios of 9.9 and 5.5 g COD/g N in influent. There was no doubt that an improvement of nitrogen removal under high COD/N ratio was observed; however, severer membrane fouling was found compared to the MBR fed with low COD/N ratio wastewater. The increase of COD/N ratio resulted in an elevated production of humic acids in soluble microbial product (SMP) and carbohydrates, proteins, and humic acids in loosely bound extracellular polymeric substance (LB-EPS). Quartz crystal microbalance with dissipation monitoring (QCM-D) analysis showed that the adsorption capability of SMP and LB-EPS was higher in the MBR with higher COD/N ratio. Four hundred fifty four high-throughput pyrosequencing revealed that the higher COD/N ratio led to the enrichment of Bacteroidetes at phylum level and Azospira, Thauera, Zoogloea, etc. at genus level. Bacteroidetes are considered to potentially release EPS, and Azospira, Thauera, and Zoogloea, etc. have denitrification activity. The change in microbial communities is consistent with MBR performance.

  1. The effect of COD loading on the granule-based enhanced biological phosphorus removal system and the recoverability.

    Science.gov (United States)

    Yu, Shenjing; Sun, Peide; Zheng, Wei; Chen, Lujun; Zheng, Xiongliu; Han, Jingyi; Yan, Tao

    2014-11-01

    In this study, the effect of varied COD loading (200, 400, 500, 600 and 800 mg L(-1)) on stability and recoverability of granule-based enhanced biological phosphorus removal (EBPR) system was investigated during continuously 53-d operation. Results showed that COD loading higher than 500 mg L(-1) could obviously deteriorate the granular EBPR system and result in sludge bulking with filamentous bacteria. High COD loading also changed the transformation patterns of poly-β-hydroxyalkanoates (PHAs) and glycogen in metabolism process of polyphosphate-accumulating organisms (PAOs) and inhibited the EPS secretion, which completely destroyed the stability and integrality of granules. Results of FISH indicated that glycogen-accumulating organisms (GAOs) and other microorganisms had a competitive advantage over PAOs with higher COD loading. The community composition and EBPR performance were recovered irreversibly in long time operation when COD loading was higher than 500 mg L(-1). PMID:25189512

  2. Using interview-based recall surveys to estimate cod Gadus morhua and eel Anguilla anguilla harvest in Danish recreational fishing

    DEFF Research Database (Denmark)

    Sparrevohn, Claus Reedtz; Storr-Paulsen, Marie

    2012-01-01

    Using interview-based recall surveys to estimate cod Gadus morhua and eel Anguilla anguilla harvest in Danish recreational fishing. – ICES Journal of Marine Science, 69: 323–330.Marine recreational fishing is a popular outdoor activity in Denmark, practised by both anglers and passive gear fishers...... mandatory Danish fishing licence. The second survey was designed to identify those who fish without a licence. It was estimated that 1231 t of cod were harvested in 2009, corresponding to 4.8% of the entire Danish cod yield (recreational harvest + commercial landings). Area differences were found, and, in...... certain areas, the recreational harvest of cod accounted for more than 30% of the total yield. The majority (81%) of the recreational cod harvest was taken by anglers. Eels, however, are almost exclusively caught with passive gear (fykenets) and a total of 104 t year−1 was harvested, which corresponds to...

  3. Effect of sludge retention time on continuous-flow system with enhanced biological phosphorus removal granules at different COD loading.

    Science.gov (United States)

    Li, Dong; Lv, Yufeng; Zeng, Huiping; Zhang, Jie

    2016-11-01

    The effect of sludge retention time (SRT) on the continuous-flow system with enhanced biological phosphorus removal (EBPR) granules at different COD loading was investigated during the operation of more than 220days. And the results showed that when the system operated at long SRT (30days) and low COD loading (200mg·L(-1)), it could maintain excellent performance. However, long SRT and high COD loading (300mg·L(-1)) deteriorated the settling ability of granules and the performance of system and resulted in the overgrowth of filamentous bacteria. Meanwhile, the transformation of poly-β-hydroxyalkanoates (PHAs) and glycogen in metabolism process was inhibited. Moreover, the results of pyrosequencing indicated that filamentous bacteria had a competitive advantage over polyphosphate-accumulating organisms (PAOs) at high COD loading and long SRT. The PAOs specious of Candidatus_Accumlibater and system performance increased obviously when the SRT was reduced to 20days at high COD loading. PMID:27472749

  4. Change of Ecological Characteristics Due to Decrease of COD/SO42- Ratio During Sulfate-reduction

    Institute of Scientific and Technical Information of China (English)

    王爱杰; 任南琪; 刘广民; 杜大仲

    2004-01-01

    In order to investigate the change of ecological characteristics due to the decrease of COD/SO42- ratio during sulfate reduction, continuous-flew tests were conducted in an acidogenic sulfate-reducing reactor with molasses wastewater as sole organic carbon source and sodium sulfate as electron acceptor, and the change of pH value, oxidation reduction potential (ORP), volatile fat acids (VFAs), alkalinity (ALK) and the predominant populations with COD/SO42- ratio decreasing from 4. 2 to 2. 0 were investigated. The experimental results demonstrated that, with decreasing COD/SO42- ratio, ORP and ALK increased, pH value decreased, and the proportion of acetic acid in terminal products decreased significantly, and a stable - type microbial community with high COD/SO42- ratio was converted into a sub -stable -type one with low COD/SO42- ratio.

  5. 77 FR 62257 - Draft Environmental Impact Statement for the Herring River Restoration Project, Cape Cod National...

    Science.gov (United States)

    2012-10-12

    ...The National Park Service (NPS) announces the availability of a Draft Environmental Impact Statement (DEIS) for the Herring River Restoration Project in Cape Cod National Seashore, Massachusetts. The DEIS provides a systematic analysis of alternative approaches to restore the Herring River estuary to a more productive and natural condition after a century of diking and...

  6. Consumer perception of wild and farmed cod and the effect of different information conditions

    NARCIS (Netherlands)

    Kole, A.; Schelvis-Smit, A.A.M.; Veldman, M.; Luten, J.B.

    2003-01-01

    The influence of product information on the consumer perception of fillets of wild and farmed cod was examined in a real in-home environment, in order to establish the external validity of these influences. Main effects in this study were observed for information about product type and for price. In

  7. Mapping the spawning grounds of North Sea cod (Gadus morhua) by direct and indirect means

    NARCIS (Netherlands)

    Fox, C.J.; Taylor, M.; Dickey-Collas, M.; Fossum, P.; Kraus, G.; Rohlf, N.; Damme, van C.J.G.; Bolle, L.J.

    2008-01-01

    Despite recent evidence for sub-stock structuring, North Sea cod are assessed as a single unit. As a consequence, knowledge of sub-stock trends is poor. In particular, there are no recent evaluations of which spawning grounds are active. Here we report results from the first ichthyoplankton survey t

  8. Prediction of vertical distribution and ambient development temperature of Baltic cod, Gadus morhua L., eggs

    DEFF Research Database (Denmark)

    Wieland, Kai; Jarre, Astrid

    1997-01-01

    An artificial neural network (ANN) model was established to predict the vertical distribution of Baltic cod eggs. Data from vertical distribution sampling in the Bornholm Basin over the period 1986-1995 were used to train and test the network, while data sets from sampling in 1996 were used for v...

  9. Improved management based on stock identification of eastern and western Baltic cod

    DEFF Research Database (Denmark)

    Hüssy, Karin; Bastardie, Francois; Eero, Margit;

    ) within the “Western” cod’s management unit was documented using high-powered genetic tools. The majority (91%) of all spawning fish caught in SD 24 in 2011 were “Eastern” cod and only 9% were from the “Western” stock. The results suggest that the stock structure in the Arkona Basin is highly influenced...... by mixing of genetically separate stocks. Trends in mixing: Since the 1980’s where cod in SD 24 consisted primarily of “Western” type, the proportion of “Eastern” cod has increased, particularly since 2005. Throughout that period, the immigration of “Eastern” cod into SD 24 consisted primarily of adult...... with a change in “Eastern” cod’s spawning behaviour. Management: The stock mixing proportions were successfully implemented in DTU Aqua’s modeling framework for management scenarios. “Eastern” immigrants into SD 24 lead the management procedure to advice for higher TACs that enhance the pressure on the fishing...

  10. Optimization of removal of COD and color from baker’s yeast wastewater by Fenton oxidation

    Directory of Open Access Journals (Sweden)

    M. Arbabi

    2014-05-01

    Conclusion: It can be concluded that Fenton’s oxidation method can be used successfully, as an alternative option to the design and choice of color and COD removal from strength industrial wastewaters e.g., bakery’s yeast industry.

  11. The invasive ctenophore Mnemiopsis leidyi poses no direct threat to Baltic cod eggs and larvae

    DEFF Research Database (Denmark)

    Jaspers, Cornelia; Titelman, Josefin; Hansson, Lars Johan;

    2011-01-01

    conducted laboratory incubation experimentsand video observations to quantify feeding rates on Baltic cod eggs and larvae. Ingestion rates increased with codlarvae concentrations up to 8 prey L21, beyond which ingestion remained constant. Neither Mnemiopsis size noregg concentration (1–16 prey L21) affected...... feeding rates on cod eggs. Observed feeding rates pooled from allexperiments conducted at nonsaturating prey concentrations were low, with the highest volume-specific clearanceon , 4.5-d-old yolk-sac larvae (0.05 6 0.02 L (mL Mnemiopsis)21 h21), and lower rates on 4.5–8-d-old larvae(0.02 6 0.02 L (m......L Mnemiopsis)21 h21) and eggs (0.02 6 0.03 L (mL Mnemiopsis)21 h21). When offered Artemiasalina and cod eggs simultaneously, Mnemiopsis passively selected against cod eggs. Video recordings showed thateggs did not trigger the capture response that Mnemiopsis shows toward motile prey, and ingested eggs were...

  12. Evaluation of farmed cod products by a trained sensory panel and consumers in different test settings

    NARCIS (Netherlands)

    Sveinsdottir, K.; Martinsdottir, E.; Thorsdottir, F.; Schelvis-Smit, A.A.M.; Kole, A.; Thorsdottir, I.

    2010-01-01

    Sensory characteristics of farmed cod exposed to low or conventional stress levels prior to slaughter were evaluated by a trained sensory panel. Consumers in two different settings, central location test (CLT) and home-use test (HUT), also tasted the products and rated them according to overall liki

  13. Eastern Baltic cod in distress: biological changes and challenges for stock assessment

    DEFF Research Database (Denmark)

    Eero, Margit; Hjelm, Joakim; Behrens, Jane;

    2015-01-01

    The eastern Baltic (EB) cod (Gadus morhua) stock was depleted and overexploited for decades until the mid-2000s, when fishing mortality rapidly declined and biomass started to increase, as shown by stock assessments. These positive developments were partly assigned to effective management measure...

  14. 50 CFR Table 5 to Part 679 - Steller Sea Lion Protection Areas Pacific Cod Fisheries Restrictions

    Science.gov (United States)

    2010-10-01

    ... 50 Wildlife and Fisheries 9 2010-10-01 2010-10-01 false Steller Sea Lion Protection Areas Pacific Cod Fisheries Restrictions 5 Table 5 to Part 679 Wildlife and Fisheries FISHERY CONSERVATION AND... THE EXCLUSIVE ECONOMIC ZONE OFF ALASKA Pt. 679, Table 5 Table 5 to Part 679—Steller Sea...

  15. WO3/W Nanopores Sensor for Chemical Oxygen Demand (COD Determination under Visible Light

    Directory of Open Access Journals (Sweden)

    Xuejin Li

    2014-06-01

    Full Text Available A sensor of a WO3 nanopores electrode combined with a thin layer reactor was proposed to develop a Chemical Oxygen Demand (COD determination method and solve the problem that the COD values are inaccurately determined by the standard method. The visible spectrum, e.g., 420 nm, could be used as light source in the sensor we developed, which represents a breakthrough by limiting of UV light source in the photoelectrocatalysis process. The operation conditions were optimized in this work, and the results showed that taking NaNO3 solution at the concentration of 2.5 mol·L−1 as electrolyte under the light intensity of 214 μW·cm−2 and applied bias of 2.5 V, the proposed method is accurate and well reproducible, even in a wide range of pH values. Furthermore, the COD values obtained by the WO3 sensor were fitted well with the theoretical COD value in the range of 3–60 mg·L−1 with a limit value of 1 mg·L−1, which reveals that the proposed sensor may be a practical device for monitoring and controlling surface water quality as well as slightly polluted water.

  16. Low-temperature transitions in cod and tuna determined by differential scanning calorimetry

    DEFF Research Database (Denmark)

    Jensen, Kristina Nedenskov; Jørgensen, Bo; Nielsen, Jette

    2003-01-01

    Differential scanning calorimetry measurements have revealed different thermal transitions in cod and tuna samples. Transition temperatures detected Lit -11degreesC, -15degreesC and -21degreesC were highly dependent on the annealing temperature. In tuna muscle an additional transition was observed...

  17. Infection of North Sea cod, Gadus morhua L., larvae with the parasitic nematode Hysterothylacium aduncum Rudolphi

    DEFF Research Database (Denmark)

    Skovgaard, Alf; Bahlool, Qusay Z. M.; Munk, Peter;

    2011-01-01

    Investigation of 2197 cod larvae and post-larvae collected in the North Sea revealed high prevalence of infection with a parasitic anisakid nematode identified morphologically and genetically as Hysterothylacium aduncum. Nematodes were third stage larvae and were almost exclusively found...

  18. Predation rates by North Sea cod (Gadus morhua) - Predictions from models on gastric evacuation and bioenergetics

    Science.gov (United States)

    Hansson, S.; Rudstam, L. G.; Kitchell, J.F.; Hilden, M.; Johnson, B.L.; Peppard, P.E.

    1996-01-01

    We compared four different methods for estimating predation rates by North Sea cod (Gadus moi hua). Three estimates, based on gastric evacuation rates, came from an ICES multispecies working group and the fourth from a bioenergetics model. The bioenergetics model was developed from a review of literature on cod physiology. The three gastric evacuation rate models produced very different prey consumption estimates for small (2 kg) fish. For most size and age classes, the bioenergetics model predicted food consumption rates intermediate to those predicted by the gastric evacuation models. Using the standard ICES model and the average population abundance and age structure for 1974-1989, annual, prey consumption by the North Sea cod population (age greater than or equal to 1) was 840 kilotons. The other two evacuation rate models produced estimates of 1020 and 1640 kilotons, respectively. The bioenergetics model estimate was 1420 kilotons. The major differences between models were due to consumption rate estimates for younger age groups of cod. (C) 1996 International Council for the Exploration of the Sea

  19. An obstacle to China's WWTPs: the COD and BOD standards for discharge into municipal sewers.

    Science.gov (United States)

    Liao, Zhenliang; Hu, Tiantian; Roker, Scott Albert C

    2015-11-01

    In 2001, a construction campaign regarding wastewater treatment plants (WWTPs) occurred in China. Unfortunately, the treatment has not yet achieved anticipated effectiveness. A critical reason for this is that the influent chemical oxygen demand (COD) and biochemical oxygen demand (BOD) concentrations in WWTPs are unacceptably low. This paper indicates that a fundamental, but commonly overlooked contributing factor to this problem is that a large portion of easily degradable COD and BOD is degraded prematurely before entering municipal sewers, and this is directly correlated to China's standards for pollutant discharging into municipal sewers. This perspective is further unfolded through retrospection of the history of Chinese wastewater treatment and the investigation of standards among developed zones and districts. This paper suggests that in China, the standards for pollutant discharging into municipal sewers should be relaxed. Meanwhile, unnecessary pretreatment of COD and BOD should cease for the purpose of ensuring that easily degradable COD and BOD can be transferred to WWTPs to improve treatment efficiency. Moreover, additional alternatives are presented to resolve this problem.

  20. Specific inhibition of Photobacterium phosphoreum extends the shelf life of modified-atmosphere-packed cod fillets

    DEFF Research Database (Denmark)

    Dalgaard, Paw; Munoz, L.G.; Mejlholm, Ole

    1998-01-01

    Inhibition of the specific spoilage organism, Photobacterium phosphoreum, was studied in model substrates and in modified- atmosphere-packed cod fillets. The objective was to determine how inhibition of this organism influenced spoilage. The spoilage reactions limiting shelf life were studied rat...

  1. Simulations on the prediction of cod (Gadus morhua) freshness from an intelligent packaging sensor concept

    NARCIS (Netherlands)

    Heising, J.K.; Boekel, van M.A.J.S.; Dekker, M.

    2015-01-01

    A non-destructive method that monitors changes in the freshness status of packed cod fillets has potential for the development of an intelligent packaging concept. The method is based on monitoring volatile compounds that dissolve and dissociate in the sensing aqueous phase. A mathematical model was

  2. COD FRACTIONS IN THE PROCESS OF MECHANICAL-BIOLOGICAL TREATMENT SEWAGE

    Directory of Open Access Journals (Sweden)

    Joanna Smyk

    2015-11-01

    Full Text Available The aim of the research was to determine the COD fraction thereof in sewage and their changes in the effluent after further treatment processes. The study was conducted in a sewage treatment plant in Bialystok (RLM> 100000. In sewage the highest concentrations occurred in the suspension of the organic fractions slowly biodegradable XS (303.7 mg O2/l and dissolved organic compounds readily biodegradable SS (263 mg O2/l. The lower amounts were irreducible fractions dissolved in sewage and suspended SI (56 mg O2/l and XI (101.2 mg O2/l. Almost 80% of the total COD fractions were biodegradable (SS + XS. In the treated wastewater soluble fraction SI-biodegradable (56 mg O2/l occurred in the highest concentration. The flow of wastewater by components of sewage treatment plant resulted the complete removal of biologically degradable fraction of dissolved SS. More than 94.5% of the total COD in waste water purified fractions were biologically decomposable (SI + XI. Moreover, based on the analysis of studies the following soil removal was found: BOD5 – 99.4%, COD – 92.9%, total nitrogen – 93.4%, total phosphorus – 92%. After waste water treatment, ammonia nitrogen was completely removed while the nitrate concentration increased to 4.6 mg N/dm3.

  3. COD and color removal of reactive orange 16 dye solution by electrochemical oxidation and adsorption method

    Science.gov (United States)

    Zakaria, Zuhailie; Ahmad, Wan Yaacob Wan; Yusop, Muhammad Rahimi; Othman, Mohamed Rozali

    2015-09-01

    Degradation of Reactive Orange 16 (RO16) dye was investigated using electrochemical oxidation and adsorption (batch method) using mixture of coconut trunk charcoal-graphite-tin-polyvinyl chloride(PVC). In batch studies for adsorbents pellet and powder form of the charcoal mixture were used. RO16 was chosen as the model dye because of its high resistance towards conventional treatment methods. NaCl and RO16 concentration, treatment duration, weight of electrode and adsorbent and volume of solution were kept constant for both methods. The effectiveness of the treatments were compared and evaluated by percentage of RO16 decolorization and chemical oxygen demand (COD) removal and results indicated that electrochemical oxidation method ables to decolorized RO16 dye up to 98.5% after 20 minutes electrolysis time while pellet and powder in batch method only removed 17.1 and 33.6% of RO16 color respectively. However, only 45.6% of COD can be removed using electrochemical oxidation method while pellet and powder in batch method removed 47.8 and 49.6% of COD respectively. The decolorization and COD removal of RO16 was determined using UV-Vis spectrophotometer (by the changes of absorption spectrum intensity of azo chromophore (-N=N-) at λ=388 and 492.50 nm and Hach spectrophotometer respectively. FTIR was used to determine functional groups present in the coconut trunk charcoal.

  4. Sensory characteristics of different cod products related to consumer preferences and attitudes

    NARCIS (Netherlands)

    Sveinsdottir, K.; Martinsdottir, E.; Green-Petersen, D.; Hyldig, G.; Schelvis-Smit, A.A.M.

    2009-01-01

    Quantitative descriptive analysis (QDA) was used to analyse the sensory quality of eight cod products, different with regard to origin (wild/farmed), storage time (short/extended) and storage method (fresh/frozen/packed in modified atmosphere). At the same time, 378 consumers in four European countr

  5. The effects of pre-salting methods on salt and water distribution of heavily salted cod, as analyzed by (1)H and (23)Na MRI, (23)Na NMR, low-field NMR and physicochemical analysis.

    Science.gov (United States)

    Gudjónsdóttir, María; Traoré, Amidou; Jónsson, Ásbjörn; Karlsdóttir, Magnea Gudrún; Arason, Sigurjón

    2015-12-01

    The effect of different pre-salting methods (brine injection with salt with/without polyphosphates, brining and pickling) on the water and salt distribution in dry salted Atlantic cod (Gadus morhua) fillets was studied with proton and sodium NMR and MRI methods, supported by physicochemical analysis of salt and water content as well as water holding capacity. The study indicated that double head brine injection with salt and phosphates lead to the least heterogeneous water distribution, while pickle salting had the least heterogeneous salt distribution. Fillets from all treatments contained spots with unsaturated brine, increasing the risk of microbial denaturation of the fillets during storage. Since a homogeneous water and salt distribution was not achieved with the studied pre-salting methods, further optimizations of the salting process, including the pre-salting and dry salting steps, must be made in the future. PMID:26041245

  6. Penyisihan COD dari Limbah Cair Pabrik Minyak Kelapa Sawit menggunakan Nano Karbon Aktif

    Directory of Open Access Journals (Sweden)

    Aris Munandar

    2016-06-01

    Full Text Available Limbah cair pabrik minyak kelapa sawit (PMKS merupakan sumber pencemar potensial yang dapat memberikan dampak serius terhadap lingkungan, sehingga diperlukan penanganan terhadap limbah cair tersebut melalui peningkatan teknologi pengolahan. Salah satu metode yang dapat digunakan untuk menghilangkan zat pencemar tersebut adalah dengan proses adsorpsi. Dalam penelitian ini, adsorben yang digunakan adalah karbon aktif dalam skala nanometer. Nano karbon diaktivasi secara fisika (kalsinasi pada suhu 700OC untuk mendapatkan volume pori yang lebih besar. Kristalinitas nano karbon aktif dianalisis menggunakan X-Ray Diffraction (XRD, sedangkan morfologi dari nano karbon aktif dianalisis dengan Scanning Electron Microscopy (SEM. Konsentrasi COD sebelum dan setelah proses adsorbsi dilakukan dengan menggunakan spektrofotometer. Penelitian ini dilakukan dengan variasi waktu kontak (0,5; 1; 2; 3; 4; dan 8 jam, massa adsorben (0,25; 0,5; 1; dan 2 gr, konsentrasi awal (47,60; 97,04; 193,84; dan 482,82 mg/l, ukuran adsorben (nano size dan mikron size, dan jenis adsorben (nano karbon aktif dan nano zeolit. Hasil penelitian menunjukkan bahwa waktu kontak, massa adsorben, jenis adsorben, dan konsentrasi awal sampel limbah mempengaruhi penyisihan COD. Waktu kontak yang optimal antara nano karbon aktif dengan COD adalah 4 jam dengan massa adsorben 2 gr. Pada jumlah atau massa adsorben yang tetap (2 gram semakin tinggi konsentrasi awal COD di dalam sampel limbah maka persen penyisihan semakin kecil. Ukuran sampel pada skala nano memberikan hasil yang lebih baik dibandingkan ukuran sampel pada skala mikron. Hasil penyisihan COD di dalam sample PMKS untuk nano karbon aktif lebih baik dibandingkan nano zeolit. Hasil Scanning Electron Microscopy (SEM terlihat bahwa nano karbon aktif memiliki ukuran nanometer (10-9.

  7. COD removal from pulp and paper effluents by Advanced Oxidation Processes (AOP); COD:n vaehentaeminen aop-menetelmaellae metsaeteollisuuden jaetevesistae - EKY 04

    Energy Technology Data Exchange (ETDEWEB)

    Jansson, K.; Wikberg, H. [Kemira Chemicals Oy, Vaasa (Finland)

    1998-12-31

    The aim of this project is to develop a process where COD from pulp and paper industry can be removed by an AOP process. AOP is a process utilizing the oxidation power of the hydroxyl radical, which can be produced in many different ways. Compared to evaporation and membrane techniques, the benefits of this process are lack of condense, concentrate and sludge. It is a very simple process, based on adjusting the COD removal by means of hydrogen peroxide dosage. The study focuses on using heterogeneous catalyst together with hydrogen peroxide to produce hydroxyl radicals in order to remove COD at low temperatures (< 100 deg C) and normal pressures. The project started by screening catalysts able to perform this task in laboratory scale. Later on pilot scale equipment will be constructed for use in pulp and paper mill trials. The project will be carried out during 1997-1999. The study started by screening the possibilities of different catalysts together with hydrogen peroxide to remove phenols from a model water. Sofar, about hundred catalysts have been screened. These tests show that many of the heterogeneous catalysts are working, but most of them have actually dissolved in the water and `translated` to homogenous catalysts. This means that they cannot be used in this project. A few catalysts have been found to meet the targets for synthetic phenol waters. Next step will be to test these catalysts on actual water samples from pulp and paper mills, and after that a pilot and full-scale trial will be planned. In these trials we will find out which mill streams are possible to treat, and the cost/performances of a system totally based on the catalyst in use. Also, measurements of catalyst leaching and clogging will be made during these tests. The last test series is planned to be a full-scale trial. (orig.)

  8. Persistent organic pollutants (POPs) in harbor seals (Phoca vitulina concolor) from the northwestern Atlantic coast

    Energy Technology Data Exchange (ETDEWEB)

    Shaw, S.D.; Brenner, D.; Bourakovsky, A. [Marine Environmental Research Inst. (MERI), Blue Hill, ME (United States); Mahaffey, C.A. [Coll. of the Atlantic, Bar Harbor, ME (United States); Perkins, C.R. [Environmental Research Inst., Storrs, CT (United States)

    2004-09-15

    Since the 1970s, very little research has been conducted on levels and potential effects of POPs in harbor seals inhabiting the northwestern Atlantic coast. During 1979-1980, an outbreak of type A influenza virus occurred among these seals, spreading northward from Cape Cod into the Gulf of Maine and ultimately resulting in the deaths of more than 500 animals. A decade later, during the winter of 1991-1992, a morbillivirus epizootic of unknown magnitude was reported among harbor seals found stranded from southern Maine to Long Island, New York. A possible role of environmental chemicals (e.g., PCBs) in these outbreaks was not investigated, although data from the 1970s indicated that their PCBs and DDT burdens were approaching the 100 ppm range. The estimated threshold value for adverse effects in harbor seals including effects on immune function is {proportional_to}17{mu}g PCB/g lw in blubber. At present, there are an estimated 99,340 harbor seals (Phoca vitulina concolor) inhabiting New England waters from the Gulf of Maine along the Atlantic coast to New Jersey. Isolated from the deeper waters of the northeast Atlantic Ocean by Georges and Brown Banks and Nantucket Shoals, the northern portion of their range is a semi-enclosed sea with a principally estuarine circulation pattern receiving significant riverine, urban, agricultural, and industrial pollutant inputs from population centers in the Northeast as well as via long-range atmospheric transport. The harbor seal population has steadily increased since the early 1980s, although in recent years, pup production has sharply declined in southern and mid-coast Maine for reasons that are poorly understood. Here we report results of the first comprehensive analysis of organohalogen compounds in harbor seals along the northwestern Atlantic coast.

  9. Effect of COD/N ratio on nitrogen removal and microbial communities of CANON process in membrane bioreactors.

    Science.gov (United States)

    Zhang, Xiaojing; Zhang, Hongzhong; Ye, Changming; Wei, Mingbao; Du, Jingjing

    2015-08-01

    In this study, the effect of COD/N ratio on completely autotrophic nitrogen removal over nitrite (CANON) process was investigated in five identical membrane bioreactors. The five reactors were simultaneously seeded for 1L CANON sludge and be operated for more than two months under same conditions, with influent COD/N ratio of 0, 0.5, 1, 2 and 4, respectively. DGGE was used to analyze the microbial communities of aerobic ammonia-oxidizing bacteria (AOB) and anaerobic ammonia-oxidizing bacteria (AAOB) in five reactors. Results revealed the harmonious work of CANON and denitrification with low COD concentration, whereas too high COD concentration suppressed both AOB and AAOB. AOB and AAOB biodiversity both decreased with COD increasing, which then led to worse nitrogen removal. The suppressing threshold of COD/N ratio for CANON was 1.7. CANON was feasible for treating low COD/N sewage, while the high sewage should be converted by anaerobic biogas producing process in advance.

  10. Effect of netting direction and number of meshes around on size selection in the codend for Baltic cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Wienbeck, Harald; Herrmann, Bent; Moderhak, Waldemar;

    2011-01-01

    We investigated experimentally the effect that turning the netting direction 90° (T90) and halving the number of meshes around in the circumference in a diamond mesh codend had on size selection of Baltic cod. The results generally agreed with predictions of a previous simulation-based study. Both...... modifications had a significant positive effect on the size selection of cod. The best selection results were obtained for a codend in which both factors were applied together. For that codend, very little between-haul variation in cod size selection was detected, especially compared to the reference codend in...

  11. Identifying eastern Baltic cod nursery grounds using hydrodynamic modelling: knowledge for the design of Marine Protected Areas

    DEFF Research Database (Denmark)

    Hinrichsen, Hans-Harald; Kraus, Gerd; Böttcher, Uwe;

    2009-01-01

    Knowledge of the spatial and temporal distribution of juvenile cod is essential to closing the life cycle in population dynamic models, and it is a prerequisite for the design of Marine Protected Areas (MPAs) aiming at the protection of juveniles. In this study, we use a hydrodynamic model...... evidence that the final destinations of juvenile cod drift routes are affected by decadal climate variability. Application of the methodology to MPA design is discussed, e.g. identifying the overlap of areas with a high probability of successful juvenile cod settlement and regions of high fishing effort...

  12. Do North Sea cod (Gadus morhua) fisheries maintain high catch rates at low stock size?

    DEFF Research Database (Denmark)

    Rindorf, Anna; Andersen, Bo Sølgaard

    2008-01-01

    This study presents all investigation of the relationship between stock size of North Sea cod (Gadus morhua) and catch rates in seven commercial fishing fleets. The shape of the relationship was estimated using a model allowing both density-dependent changes in catchability and bias in the assess......This study presents all investigation of the relationship between stock size of North Sea cod (Gadus morhua) and catch rates in seven commercial fishing fleets. The shape of the relationship was estimated using a model allowing both density-dependent changes in catchability and bias......, the change was insufficient to compensate for the decrease in stock size, and catch rates of all fleets decreased. Two factors that could lead to nonconstant catchability were investigated: (i) the presence of decoupling between stock size and density ill high-density areas and (ii) the presence...

  13. Eel, cod and seatrout harvest in Danish recreational fishing during 2011

    DEFF Research Database (Denmark)

    Sparrevohn, Claus Reedtz; Storr-Paulsen, Marie

    Marine recreational fishing is a popular outdoor leisure activity, yet the impact on the targeted stocks is often unidentified. In order to estimate 2011 cod, eel and seatrout harvest (fish caught and kept) in the Danish angling and passive gear fishing, two interview surveys were conducted in July...... 2011 and January 2012. Recreational fishing was separated into anglers (with rod and reel) and passive gear fishing (fyke and gillnets). In 2011 a total of 157,762 anglers and 33,911 passive gear fishers had issued the annual license, which is compulsory if saltwater fishing is practiced. In total, it...... was estimated that 80 t [Relative standard error (RSE)=6%] eel, close to 1,300 t (RSE=5 %) cod and 400 t (RSE=5 %) seatrout (including freshwater catches) was harvested in the recreational fishery. Eel is almost exclusively taken in the passive gear fykenet fishery and seatrout was mainly caught by...

  14. Historical ecology provides new insights for ecosystem management: Eastern Baltic cod case study

    DEFF Research Database (Denmark)

    MacKenzie, Brian; Ojaveer, Henn; Eero, Margit

    2011-01-01

    A recent historical marine ecological case study (cod in the eastern Baltic Sea) is used to show how long-term data and knowledge of fluctuations can contribute to revisions of fishery management policy. The case study first developed new longer analytical time series of spawner biomass and recru......A recent historical marine ecological case study (cod in the eastern Baltic Sea) is used to show how long-term data and knowledge of fluctuations can contribute to revisions of fishery management policy. The case study first developed new longer analytical time series of spawner biomass...... and recruitment back to the 1920s, which extended knowledge of population dynamics into a time period when ecosystem state was characterized by temporally varying combinations of exploitation, climate-hydrographic conditions, marine mammal predation and eutrophication. Recovery of spatially resolved historical...

  15. Time changes in fishing power in the Danish cod fisheries of the Baltic Sea

    DEFF Research Database (Denmark)

    Marchal, P.; Nielsen, J. Rasmus; Hovgård, Holger;

    2001-01-01

    Using nominal fishing effort to control fishing mortality and using cpue data from commercial fisheries as abundance indices require ability to correct fishing power for temporal development. It is often assumed in ICES stock assessments that fishing power Is constant over time. However, experience...... is that their fishing power has not varied much over time. IFP is calculated for some of the Danish cod fisheries in the Baltic Sea. IFP appeared to be independent of the vessel composition of the reference sub- fleet and for the fleets fishing in the Eastern Baltic Sea. but less so for the Western Baltic Sea fleets....... Variations in IFP are analysed by a GLM (General Linear Model). Results suggest that fishing power has developed in the Eastern Baltic Sea cod fishery at an annual rate of 2% and 6% for trawlers and gillnetters respectively. Mechanisms of fishing power creeping may include increased technical efficiency...

  16. Developing Baltic cod recruitment models II : Incorporation of environmental variability and species interaction

    DEFF Research Database (Denmark)

    Köster, Fritz; Hinrichsen, H.H.; St. John, Michael;

    2001-01-01

    , predation) were also significant and when incorporated explained 69% of the variation in 0-group recruitment. In other spawning areas, variable hydrographic conditions did not allow for regular successful egg development. Hence, relatively simple models proved sufficient to predict recruitment of 0-group......We investigate whether a process-oriented approach based on the results of field, laboratory, and modelling studies can be used to develop a stock-environment-recruitment model for Central Baltic cod (Gadus morhua). Based on exploratory statistical analysis, significant variables influencing...... survival of early life stages and varying systematically among spawning sites were incorporated into stock-recruitment models, first for major cod spawning sites and then combined for the entire Central Baltic. Variables identified included potential egg production by the spawning stock, abiotic conditions...

  17. Location of and post-mortem changes in some cytoskeletal proteins in pork and cod muscle

    DEFF Research Database (Denmark)

    Morrison, E.H.; Bremner, Allan; Purslow, P.P.

    2000-01-01

    The cytoskeletal proteins actin, nebulin, spectrin, desmin, vinculin and talin were labelled immunohistochemically in sections of muscle from commercially available pigs and cod (Gadus morhua) taken pre-rigor and from samples stored for several days. Actin, nebulin and spectrin gave similar...... labelling in fish. Labelling for talin in pork muscle was intense at the sarcolemma but was not present in samples stored for 4 days. In contrast, the label for talin was concentrated at the myotendinous junction of the cod muscle throughout the storage period. These are the first reports of the detection...... and location of spectrin and vinculin in fish muscle and of the location of talin. The results are discussed in terms of muscle structure, function and post-mortem tenderisation. (C) 2000 Society of Chemical Industry....

  18. Development of new concepts for escape windows to minimise cod catches in Norway lobster fisheries

    DEFF Research Database (Denmark)

    Madsen, Niels; Frandsen, Rikke; Holst, René;

    2010-01-01

    particularly on moving the window further back, gaining more stability in the codend to avoid loss of Norway lobster through the window, making a relatively narrow section where the window is located, and testing larger mesh sizes in the window. We designed a four panel sorting section—the sorting box......—where a 300 mm window is placed at the top section at about 3–6 m from the codline. Acoustic release technology was used to avoid catch loss during gear retrieval. Sea trials were conducted in the Skagerrak and Kattegat from a commercial trawler. The sorting box yielded a high reduction of the cod catch......Gear selectivity with regard to cod (Gadus morhua) needs to be improved in the Kattegat and Skagerrak Norway lobster (Nephrops norvegicus) fishery. One way to achieve this goal is to improve the selectivity of an escape window (henceforth window) in the gear. Our gear development focused...

  19. Improving selectivity of the Baltic cod pelagic trawl fishery: Experiments to assess the next step

    DEFF Research Database (Denmark)

    Madsen, Niels; Tschernij, Vesa; Holst, René

    2010-01-01

    Due to declining cod (Gadus morhua) stocks, the Baltic Sea was one of the first areas regulated by the European Communities where selective escape windows were implemented to improve the exploitation pattern. Increasing discard rates and the potential for a significant increase of the spawning...... stock and the yield of the fishery are important reasons to further improve the selectivity of the fishery and to asses the potential next step in this process. In this study, we tested three relatively different design concepts, in the Baltic cod pelagic trawl fishery, that are relevant to past or...... present legislation and that were developed to meet requirements of increased selectivity performance. A standard nominal 135 mm diamond mesh codend, a codend with two nominal 125 mm bottom windows, and a codend with a nominal 125 mm nominal top window were tested using the covered codend method. A Danish...

  20. Larval trophodynamics, turbulence, and drift on Georges Bank : A sensitivity analysis of cod and haddock

    DEFF Research Database (Denmark)

    Werner, F.E.; MacKenzie, Brian; Perry, R.I.;

    2001-01-01

    Using an individual-based model approach we consider trophodynamic effects on the growth and survival of larval cod (Gadus morhua) and haddock (Melanogrammus aeglefinus) on Georges Bank during late winter/early spring. These studies represent an extension of results described in Werner et al. (1996......; Deep-Sea Res. lf), wherein the effect of turbulence- enhanced larval-prey contact rates increased the effective prey concentration resulting in growth of cod larvae consistent with observed rates in the field. We reformulated the feeding of the larvae to include existing relationships between maximum...... behaviour, the effect of turbulence on pursuit and capture, and vertical dispersion decrease the predicted larval growth rates compared to those observed in the earlier study. These results suggest that larval feeding behaviour, and especially the ability of larvae to pursue encountered prey, could...

  1. Effect of Algal Inoculation on COD and Nitrogen Removal, and Indigenous Bacterial Dynamics in Municipal Wastewater.

    Science.gov (United States)

    Lee, Jangho; Lee, Jaejin; Shukla, Sudheer Kumar; Park, Joonhong; Lee, Tae Kwon

    2016-05-28

    The effects of algal inoculation on chemical oxygen demand (COD) and total nitrogen (TN) removal, and indigenous bacterial dynamics were investigated in municipal wastewater. Experiments were conducted with municipal wastewater inoculated with either Chlorella vulgaris AG10032, Selenastrum gracile UTEX 325, or Scenedesmus quadricauda AG 10308. C. vulgaris and S. gracile as fast growing algae in municipal wastewater, performed high COD and TN removal in contrast to Sc. quadricauda. The indigenous bacterial dynamics revealed by 16S rRNA gene amplification showed different bacterial shifts in response to different algal inoculations. The dominant bacterial genera of either algal case were characterized as heterotrophic nitrifying bacteria. Our results suggest that selection of indigenous bacteria that symbiotically interact with algal species is important for better performance of wastewater treatment. PMID:26930350

  2. Coastal landforms and processes at the Cape Cod National Seashore, Massachusetts—A primer

    Science.gov (United States)

    Giese, Graham S.; Williams, S. Jeffress; Adams, Mark

    2015-12-17

    Anyone who spends more than a few days on Cape Cod (the Cape) quickly becomes a coastal geologist, quickly learning the rhythms of daily tides and the seasonal cycles of beaches growing and being swept away by storms; swimmers and surfers track how the breakers appear, and dog-walkers notice the hard-packed sand blanketed overnight by an airy layer that leaves deep labored tracks.

  3. Reducing COD level on oily effluent by utilizing biosurfactant-producing bacteria

    Directory of Open Access Journals (Sweden)

    Daniela Franco Carvalho Jacobucci

    2009-08-01

    Full Text Available Two bacteria isolated from crude oil contaminated soil, Pantoea agglomerans and Planococcus citreus, produced biosurfactants utilizing 1.5% of kerosene and olive oil as the sole carbon sources, respectively. The bacteria and the biosurfactants produced were introduced to oily effluent, arising from margarine and soap industry. Emulsification activities were determined by increases in the absorbance of the oil-in-water emulsions at 610 nm, whereas the water-in-oil emulsions were expressed as the height (cm of the emulsion layers formed. The 72 h incubation experiment resulted in a COD (Chemical Oxygen Demand reduction of 76% with Planococcus citreus strain and 70% with Pantoea agglomerans.The COD reduction with bacterial biosurfactants was over 50% in 24 h of incubation. The COD reduction showed that these strains and the surfactants produced could be used in bioremediation processes.Duas bactérias isoladas de solo contaminado com derivados de petróleo, Pantoea agglomerans e Planococcus citreus, produzem biosurfactantes utilizando respectivamente 1.5% de querosene e óleo de oliva como únicas fontes de carbono. As bactérias e os biosurfactantes produzidos foram adicionados a um efluente oleoso obtido de uma indústria nacional de sabão e margarina. As atividades de emulsificação foram determinadas pelo aumento da absorbância das emulsões óleo em água a 610 nm, enquanto que as emulsões do tipo água em óleo foram expressas em centímetros, pela altura do halo de espumas formado. A redução da demanda química de oxigênio (COD mostra que as linhagens e os biosurfactantes produzidos podem ser utilizados em processos de biorremediação.

  4. Factors determining variations in otolith microincrement width of demersal juvenile Baltic cod Gadus morhua

    DEFF Research Database (Denmark)

    Hüssy, Karin; Mosegaard, Henrik; Hinrichsen, H.H.;

    2003-01-01

    Pelagic and demersal juvenile Baltic cod Gadus morhua L. were collected on the slope and the top of Rønne bank in the Baltic Sea during 2 cruises in November and December 1998. The objective of this study was to evaluate distinct changes in otolith increment width observed in demersal juveniles b......, performed vertical migrations during the second interval, and stayed in association with the seafloor in the subsequent interval, corresponding to the time after the breakdown of the thermocline....

  5. Selection of Optimum Features using PSOSPG2 for Predicting COD Effluent Level in Wastewater

    OpenAIRE

    Vijayabhanu Rajagopal; V. Radha

    2013-01-01

    Wastewaters are waterborne solids and liquids which get discharged into sewers representing the wastes of public life. Wastewater Treatment is the process of removing contaminants from both runoffand domestic wastewater. Chemical Oxygen Demand (COD) is used to measure the degradable organic matter confined in wastewater effluents. An anaerobic process becomes popular method for the treatment of a number of waste streams. Up-flow Anaerobic Filter (UAF) is an anaerobic reactor which is used for...

  6. Topical Formulation Comprising Fatty Acid Extract from Cod Liver Oil: Development, Evaluation and Stability Studies

    OpenAIRE

    Ilievska, Biljana; Loftsson, Thorsteinn; Hjalmarsdottir, Martha Asdis; Asgrimsdottir, Gudrun Marta

    2016-01-01

    The purpose of this study was to develop a pharmaceutical formulation containing fatty acid extract rich in free omega-3 fatty acids such as eicosapentaenoic acid and docosahexaenoic acid for topical use. Although the health benefits of cod liver oil and other fish oils taken orally as a dietary supplement have been acknowledged and exploited, it is clear that their use can be extended further to cover their antibacterial properties. In vitro evaluation showed that 20% (v/v) fatty acid extrac...

  7. Reduction Of Cod And Bod By Oxidation: A Cetp Case Study

    OpenAIRE

    Prashant K. Lalwani, Malu D. Devadasan

    2013-01-01

    The present study is focused on a Common Effluent Treatment Plant (CETP) located at Umaraya, District Baroda. Waste water from about thirty five small and medium scale industries majorly comprising of chemical manufacturing and pharmaceutical industries are treated in this CETP. The incoming wastewater was collected and segregated into three groups as per their BOD/COD ratio. They were then oxidized independently by two oxidants Fenton’s reagent (Fe2+/H2O2) and Sodium Hypochlorite (NaOCl) and...

  8. COD FRACTIONS IN THE PROCESS OF MECHANICAL-BIOLOGICAL TREATMENT SEWAGE

    OpenAIRE

    Joanna Smyk; Katarzyna Ignatowicz

    2015-01-01

    The aim of the research was to determine the COD fraction thereof in sewage and their changes in the effluent after further treatment processes. The study was conducted in a sewage treatment plant in Bialystok (RLM> 100000). In sewage the highest concentrations occurred in the suspension of the organic fractions slowly biodegradable XS (303.7 mg O2/l) and dissolved organic compounds readily biodegradable SS (263 mg O2/l). The lower amounts were irreducible fractions dissolved in sewage and su...

  9. Three-way modelling of NMR relaxation profiles from thawed cod muscle

    DEFF Research Database (Denmark)

    Jensen, Kristina Nedenskov; Guldager, Helle Skov; Jørgensen, Bo Munk

    2002-01-01

    Low-field 1H nuclear magnetic resonance transverse relaxation was used to measure water mobility and distribution in cod stored at -20°C or -30°C for up to 12 months and subsequently from 0 to 21 days in modified atmosphere at +2°C. The relaxation profiles were decomposed by parallel factor analy......, but not the relaxation times, depended on the frozen storage temperature and on the chilled storage period....

  10. Synthesis and degradation of adenosine triphosphate in cod ( Gadus morhua ) at subzero temperatures

    DEFF Research Database (Denmark)

    Cappeln, Gertrud; Nielsen, Jette; Jessen, Flemming

    1999-01-01

    This study has demonstrated that the extraction step is very important when analysing ATP and its degradation products. An important factor is whether the sample is fresh, frozen or thawed when homogenised since thawing of the sample will lead to rapid loss of ATP. During frozen storage it was...... degrees C. Furthermore, it was found that in whole cod ATP could be synthesised at a significant rate at -7 degrees C. (C) 1999 Society of Chemical Industry....

  11. Simultaneous removal of COD and nitrogen using a novel carbon-membrane aerated biofilm reactor

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    A membrane aerated biofilm reactor is a promising technology for wastewater treatment. In this study, a carbon-membrane aerated biofilm reactor (CMABR) has been developed, to remove carbon organics and nitrogen simultaneously from one reactor. The results showed that CMABR has a high chemical oxygen demand (COD) and nitrogen removal efficiency, as it is operated with a hydraulic retention time (HRT) of 20 h, and it also showed a perfect performance, even if the HRT was shortened to 12 h. In this period, the removal efficiencies of COD, ammonia nitrogen (NH4+-N), and total nitrogen (TN) reached 86%, 94%, and 84%, respectively. However,the removal efficiencies of NH4+-N and TN declined rapidly as the HRT was shortened to 8 h. This is because of the excessive growth of biomass on the nonwoven fiber and very high organic loading rate. The fluorescence in situ hybridization (FISH) analysis indicated that the ammonia oxidizing bacteria (AOB) were mainly distributed in the inner layer of the biofilm. The coexistence of AOB and eubacteria in one biofilm can enhance the simultaneous removal of COD and nitrogen.

  12. Reduction Of Cod And Bod By Oxidation: A Cetp Case Study

    Directory of Open Access Journals (Sweden)

    Prashant K. Lalwani, Malu D. Devadasan

    2013-05-01

    Full Text Available The present study is focused on a Common Effluent Treatment Plant (CETP located at Umaraya, District Baroda. Waste water from about thirty five small and medium scale industries majorly comprising of chemical manufacturing and pharmaceutical industries are treated in this CETP. The incoming wastewater was collected and segregated into three groups as per their BOD/COD ratio. They were then oxidized independently by two oxidants Fenton’s reagent (Fe2+/H2O2 and Sodium Hypochlorite (NaOCl and reduction in COD and BOD were observed at different chlorine, H2O2, FeSO4 doses, different pH values and contact time for determining the optimum values. COD and BOD values at optimized conditions for the two oxidants were compared and observed that maximum reduction of 64.35% and 68.57% respectively was achieved by Fenton’s reagent. The results clearly indicate that conventional system should be replaced by advanced oxidation process and Fenton’s reagent is a suitable choice.

  13. Removal of colour and COD from wastewater containing acid blue 22 by electrochemical oxidation

    International Nuclear Information System (INIS)

    Electrochemical oxidation of synthetic wastewater containing acid blue 22 on a boron-doped diamond electrode (BDD) was studied, using cyclic voltammetry and bulk electrolysis. The influence of current density, dye concentration, flow rate, and temperature was investigated, in order to find the best conditions for COD and colour removal. It was found that, during oxidation, a polymeric film, causing BDD deactivation, was formed in the potential region of water stability, and that it was removed by anodic polarisation at high potentials in the region of O2 evolution. Bulk electrolysis results showed that the electrochemical process was suitable for completely removing COD and effectively decolourising wastewaters, due to the production of hydroxyl radicals on the diamond surface. In particular, under optimal experimental conditions of flow rates (i.e. 300 dm3 h-1) and current density (i.e. 20 mA cm-2), 97% of COD was removed in 12 h electrolysis, with 70 kWh m-3energy consumption

  14. Reduction of COD in wastewater from an organized tannery industrial region by Electro-Fenton process

    Energy Technology Data Exchange (ETDEWEB)

    Kurt, Ugur [Yildiz Technical University, Environmental Engineering Department, 34349 Istanbul (Turkey)]. E-mail: ukurt@yildiz.edu.tr; Apaydin, Omer [Yildiz Technical University, Environmental Engineering Department, 34349 Istanbul (Turkey)]. E-mail: apaydin@yildiz.edu.tr; Gonullu, M. Talha [Yildiz Technical University, Environmental Engineering Department, 34349 Istanbul (Turkey)]. E-mail: gonul@yildiz.edu.tr

    2007-05-08

    Advanced oxidation processes (AOPs) have led the way in the treatment of aqueous waste and are rapidly becoming the chosen technology for many applications. In this paper, COD reduction potential of leather tanning industry wastewaters by Electro-Fenton (EF) oxidation, as one of the AOPs, was experimentally evaluated. The wastewater sample was taken from an outlet of an equalization basin in a common treatment plant of an organized tannery industrial region in Istanbul, Turkey. Treatment of the wastewater was carried out by an electrochemical batch reactor equipped with two iron electrodes, which were connected parallel to each other. The oxidation process was studied for optimization of H{sub 2}O{sub 2} and the electricity consumptions were observed at different contact times under different pH conditions (3.0, 5.0 and 7.2). In each case, electricity consumption for decreased COD mass was estimated. In this process, COD was reduced by 60-70% within 10 min. By taking into consideration the local sewerage discharge limit, applicability of EF process for the tannery wastewaters was evaluated.

  15. Assessing the Impact of Policy Changes in the Icelandic Cod Fishery Using a Hybrid Simulation Model

    Directory of Open Access Journals (Sweden)

    Sigríður Sigurðardóttir

    2014-01-01

    Full Text Available Most of the Icelandic cod is caught in bottom trawlers or longliners. These two fishing methods are fundamentally different and have different economic, environmental, and even social effects. In this paper we present a hybrid-simulation framework to assess the impact of changing the ratio between cod quota allocated to vessels with longlines and vessels with bottom trawls. It makes use of conventional bioeconomic models and discrete event modelling and provides a framework for simulating life cycle assessment (LCA for a cod fishery. The model consists of two submodels, a system dynamics model describing the biological aspect of the fishery and a discrete event model for fishing activities. The model was run multiple times for different quota allocation scenarios and results are presented where different scenarios are presented in the three dimensions of sustainability: environmental, social, and economic. The optimal allocation strategy depends on weighing the three different factors. The results were encouraging first-steps towards a useful modelling method but the study would benefit greatly from better data on fishing activities.

  16. Removal of colour and COD from wastewater containing acid blue 22 by electrochemical oxidation

    Energy Technology Data Exchange (ETDEWEB)

    Panizza, Marco [Dipartimento di Ingegneria Chimica e di Processo ' G.B. Bonino' , Universita degli Studi di Genova, p.le J.F. Kennedy 1, 16129 Genova (Italy)], E-mail: marco.panizza@unige.it; Cerisola, Giacomo [Dipartimento di Ingegneria Chimica e di Processo ' G.B. Bonino' , Universita degli Studi di Genova, p.le J.F. Kennedy 1, 16129 Genova (Italy)

    2008-05-01

    Electrochemical oxidation of synthetic wastewater containing acid blue 22 on a boron-doped diamond electrode (BDD) was studied, using cyclic voltammetry and bulk electrolysis. The influence of current density, dye concentration, flow rate, and temperature was investigated, in order to find the best conditions for COD and colour removal. It was found that, during oxidation, a polymeric film, causing BDD deactivation, was formed in the potential region of water stability, and that it was removed by anodic polarisation at high potentials in the region of O{sub 2} evolution. Bulk electrolysis results showed that the electrochemical process was suitable for completely removing COD and effectively decolourising wastewaters, due to the production of hydroxyl radicals on the diamond surface. In particular, under optimal experimental conditions of flow rates (i.e. 300 dm{sup 3} h{sup -1}) and current density (i.e. 20 mA cm{sup -2}), 97% of COD was removed in 12 h electrolysis, with 70 kWh m{sup -3}energy consumption.

  17. Understanding Global Supply Chains and Seafood Markets for the Rebuilding Prospects of Northern Gulf Cod Fisheries

    Directory of Open Access Journals (Sweden)

    Ahmed S. Khan

    2012-11-01

    Full Text Available Although fisheries production and seafood trade are global in scope, with billions of dollars in exports, the rebuilding of collapsed fisheries often focus on national fisheries policy and management measures, with little attention to global supply chains and international consumer markets. Even with two moratoria and two decades of policy changes since the Northern Gulf cod fisheries collapsed in eastern Canada, rebuilding has stalled and the fishing industry and coastal communities continue to undergo challenges with economic viability and resource sustainability. This paper examines and analyzes the global supply chain and marketing dimension of Northern Gulf cod fisheries. Drawing upon fisheries bioeconomics and governance theory, a pre- and post-collapse analysis is undertaken to understand key drivers and institutional mechanisms along global fish supply chains for an effective and successful rebuilding. Findings indicate that the collapse of the cod fishery has cascading effects that go beyond ecosystem changes to new harvesting activities, industry restructuring, supply chain reorganization, new global markets and consumer preference for certified seafood. This suggests that a holistic rebuilding approach is necessary, one that integrates institutional and behavioral changes for both producers and consumers at various scales of fisheries production, political economy issues, as well as cross-scale policies on marine conservation and regional economic development.

  18. Performance evaluation of low cost adsorbents in reduction of COD in sugar industrial effluent.

    Science.gov (United States)

    Parande, Anand K; Sivashanmugam, A; Beulah, H; Palaniswamy, N

    2009-09-15

    Studies on reduction of chemical oxygen demand (COD) in effluent from sugar industry have been carried out by employing different absorbents optimizing various parameters, such as initial concentration of adsorbate, pH, adsorbent dosage and contact time. Experimental studies were carried out in batches using metakaolin, tamarind nut carbon and dates nut carbon as adsorbents by keeping initial adsorbent dosage at 1 g l(-1), agitation time over a range of 30-240 min, adsorbent dosage at 100-800 mg l(-1) by varying the pH range from 4 to 10. Characterization of there adsorbents were done using techniques such as Fourier transforms infra red spectroscopy (FTIR), X-ray diffraction (XRD) and scanning electron microscope (SEM). The experimental adsorption data fitted well to Langmuir and Freundlich adsorption isotherms. The isotherms of the adsorbents indicate appreciable adsorption capacity. Higher COD removal was observed at neutral pH conditions. Studies reveal that maximum reduction efficiency of COD takes place using metakaolin as an absorbent at a dosage of 500 mg l(-1) in a contact time of 180 min at pH 7 and it could be used as an efficient absorbent for treating sugar industrial effluent.

  19. Reduction of COD in wastewater from an organized tannery industrial region by Electro-Fenton process

    International Nuclear Information System (INIS)

    Advanced oxidation processes (AOPs) have led the way in the treatment of aqueous waste and are rapidly becoming the chosen technology for many applications. In this paper, COD reduction potential of leather tanning industry wastewaters by Electro-Fenton (EF) oxidation, as one of the AOPs, was experimentally evaluated. The wastewater sample was taken from an outlet of an equalization basin in a common treatment plant of an organized tannery industrial region in Istanbul, Turkey. Treatment of the wastewater was carried out by an electrochemical batch reactor equipped with two iron electrodes, which were connected parallel to each other. The oxidation process was studied for optimization of H2O2 and the electricity consumptions were observed at different contact times under different pH conditions (3.0, 5.0 and 7.2). In each case, electricity consumption for decreased COD mass was estimated. In this process, COD was reduced by 60-70% within 10 min. By taking into consideration the local sewerage discharge limit, applicability of EF process for the tannery wastewaters was evaluated

  20. CARINA oxygen data in the Atlantic Ocean

    OpenAIRE

    Stendardo, I.; Gruber, N.; A. Körtzinger

    2009-01-01

    In the CARINA (Carbon dioxide in the Atlantic Ocean) project, a new dataset with many previously unpublished hydrographic data from the Atlantic, Arctic and Southern Ocean was assembled and subjected to careful quality control (QC) procedures. Here, we present the dissolved oxygen measurements in the Atlantic region of the dataset and describe in detail the secondary QC procedures that aim to ensure that the data are internally consistent. This is achieved by a cross-over analysis, i.e. the c...

  1. 77 FR 69596 - Atlantic Highly Migratory Species; Advisory Panel for Atlantic Highly Migratory Species Southeast...

    Science.gov (United States)

    2012-11-20

    ... but not limited to data and models, used in stock assessments for oceanic sharks in the Atlantic Ocean... assessments for oceanic sharks in the Atlantic Ocean, Gulf of Mexico, and Caribbean Sea. While the SEDAR Pool was created specifically for Atlantic oceanic sharks, it may be expanded to include other HMS,...

  2. 76 FR 65700 - Atlantic Highly Migratory Species; Advisory Panel for Atlantic Highly Migratory Species Southeast...

    Science.gov (United States)

    2011-10-24

    ..., used in stock assessments for oceanic sharks in the Atlantic Ocean, Gulf of Mexico, and Caribbean Sea... sharks in the Atlantic Ocean, Gulf of Mexico, and Caribbean Sea. While the SEDAR Pool was created specifically for Atlantic oceanic sharks, it may be expanded to include other HMS, as needed. The...

  3. 75 FR 57698 - Atlantic Highly Migratory Species; Atlantic Billfish Management, White Marlin (Kajikia albidus

    Science.gov (United States)

    2010-09-22

    ... western Atlantic Ocean, white marlin and blue marlin from the North Atlantic Ocean, and longbill spearfish... published an interim rule (63 FR 14030) that increased the minimum size limits for Atlantic blue marlin and... Consolidated HMS FMP (71 FR 58058), which, among other things, included the annual recreational 250 blue...

  4. Crystallography Open Database (COD): an open-access collection of crystal structures and platform for world-wide collaboration.

    Science.gov (United States)

    Gražulis, Saulius; Daškevič, Adriana; Merkys, Andrius; Chateigner, Daniel; Lutterotti, Luca; Quirós, Miguel; Serebryanaya, Nadezhda R; Moeck, Peter; Downs, Robert T; Le Bail, Armel

    2012-01-01

    Using an open-access distribution model, the Crystallography Open Database (COD, http://www.crystallography.net) collects all known 'small molecule / small to medium sized unit cell' crystal structures and makes them available freely on the Internet. As of today, the COD has aggregated ~150,000 structures, offering basic search capabilities and the possibility to download the whole database, or parts thereof using a variety of standard open communication protocols. A newly developed website provides capabilities for all registered users to deposit published and so far unpublished structures as personal communications or pre-publication depositions. Such a setup enables extension of the COD database by many users simultaneously. This increases the possibilities for growth of the COD database, and is the first step towards establishing a world wide Internet-based collaborative platform dedicated to the collection and curation of structural knowledge.

  5. The influence of ozonated time on the degree of depreciation of BOD, COD, TSS and phosphate in hospital liquid waste

    International Nuclear Information System (INIS)

    The influence of ozonated time towards degree depreciation of Bode, COD, TSS and phosphate in hospital liquid waste was done. This research aim study influence of lime adding and ozone using to reduce of BOD, COD, TSS and phosphate in hospital waste. Added of lime mean for total increase ion OH-, while parameter of ozonization time mean to complete organic compounds oxidation in waste and flock formation. From this research it was found that optimum lime addition was 1.1% (% weight) and ozonization time was 20 minutes. In this condition it was achieved degree of BOD = 18.88 mg/l; COD = 25.68 mg/l, TSS = 80 mg/l and phosphate = 1.52 mg/l. This condition fulfil quality standard decided, that has to BOD = 75 mg/l; COD = 100 mg/l, TSS = 100 mg/l and phosphate = 2.0 mg/l. (author)

  6. Continuous Resistivity Profile Tracklines of Data Collected from Cape Cod National Seashore, May 17-20, 2004

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Continuous resistivity profiling (CRP) surveys were conducted at Cape Cod National Seashore in 2004 and 2006 in order to test hypotheses about groundwater flow...

  7. Point Shapefile with a Point Every 100 meters along the Cape Cod National Seashore Resistivity Survey tracklines, Feb. 28, 2006

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Continuous resistivity profiling (CRP) surveys were conducted at Cape Cod National Seashore in 2004 and 2006 in order to test hypotheses about groundwater flow...

  8. Temporal trends in age and size at maturation of four North Sea gadid populations: cod, haddock, whiting, and Norway pout

    DEFF Research Database (Denmark)

    Marty, Lise; Rochet, Marie-Joëlle; Ernande, Bruno

    2014-01-01

    We establish that age and length at 50% proportion mature decreased from the 70’s to the 2000’s in North Sea cod (Gadus morhua), haddock (Melanogrammus aeglefinus), and whiting (Merlangius merlangus), but not in Norway pout (Trisopterus esmarkii). The potential contributions of demography......, phenotypic plasticity, and evolution to these trends were assessed. First, maturation trends were extricated from demographic effects and growth-dependent plasticity by estimating probabilistic maturation reaction norms (PMRNs). PMRN midpoints have significantly shifted downwards at most ages for cod...... in response to fishing, is plausible in haddock, whiting, and male cod, unlikely for Norway pout, but not needed to explain trends in female cod maturation. In agreement with life-history theory, the maturation response was larger in fast-growing, late- and large-maturing species exhibiting moderate...

  9. AFSC/RACE/FBEP/Hurst: Contrasting coastal and shelf nursery habitats of Pacific cod in the southeastern Bering Sea

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This dataset is from a study examining the use of demersal and pelagic habitats in the southeast Bering Sea by age-0 Pacific cod, based on 4 years of demersal trawl...

  10. Connectivity of larval cod in the transition area between North Sea and Baltic Sea and potential implications for fisheries management

    DEFF Research Database (Denmark)

    Huwer, Bastian; Hinrichsen, H.-H.; Hüssy, Karin;

    2016-01-01

    distributions of juvenile cod. The transport of particles showed considerable intra- and interannual variability, but also some general patterns of retention within and dispersion todifferentmanagement areas.Good spatial overlapof particle end positions, representing potential juvenile settlement areas...

  11. Coupling of the distribution of silicon isotopes to the meridional overturning circulation of the North Atlantic Ocean

    Science.gov (United States)

    Brzezinski, Mark A.; Jones, Janice L.

    2015-06-01

    The distribution of silicon isotopes within silicic acid, δ30Si(OH)4, was examined along a section in the North Atlantic from the Cape Verde Islands off Africa to Cape Cod, Massachusetts in North America. Surface water displayed elevated δ30Si(OH)4 associated with biological fractionation of Si during silica production. Below 300 m variations in δ30Si(OH)4 were closely tied to the distribution of water masses as diagnosed through optimum multiparameter analysis, confirming a tight relationship between δ30Si(OH)4 and the meridional overturning circulation in the Atlantic. A linear relationship between δ30Si(OH)4 and the inverse of silicic acid concentration supported control of Si isotope distribution by conservative mixing of end member water masses of different isotopic composition in the Atlantic. There was a suggestion of a weak local minimum in δ30Si(OH)4 in deep waters above the Trans-Atlantic Geotraverse hydrothermal zone on the mid-Atlantic Ridge consistent with the light δ30Si(OH)4 of hydrothermal waters. The lightest δ30Si(OH)4 values were observed in the deep western and deep eastern basins where Antarctic Bottom Water (AABW) dominated. The heaviest values in subsurface waters occurred in North Atlantic Deep Water due to strong ventilation and the contribution of heavy northern source waters that are influenced by the Arctic Ocean. The concept of a silicon isotope bipole is introduced to explain how the isotopic differences between the northern and southern end-member water masses arise, and how they influence Si isotope distributions. Northern end-member water masses are heavy due to the influence of the Arctic Ocean. Bottom topography prevents light deep waters from entering the Arctic and the further removal of light isotopes through local biological productivity results in extremely heavy δ30Si(OH)4 within the Arctic. Light AABW dominates the southern end member. The Southern Ocean silicic acid trap distills heavier isotopes of Si out of the

  12. The pH-dependent expression of the urease operon in Streptococcus salivarius is mediated by CodY.

    Science.gov (United States)

    Huang, Szu-Chuan; Burne, Robert A; Chen, Yi-Ywan M

    2014-09-01

    Urease gene expression in Streptococcus salivarius 57.I, a strain of one of the major alkali producers in the mouth, is induced by acidic pH and excess amounts of carbohydrate. Expression is controlled primarily at the transcriptional level from a promoter, pureI. Recent sequencing analysis revealed a CodY box located 2 bases 5' to the -35 element of pureI. Using continuous chemostat culture, transcription from pureI was shown to be repressed by CodY, and at pH 7 the repression was more pronounced than that in cells grown at pH 5.5 under both 20 and 100 mM glucose. The direct binding of CodY to pureI was demonstrated by electrophoretic mobility shift assay and chromatin immunoprecipitation (ChIP)-quantitative real-time PCR (qPCR). The result of ChIP-qPCR also confirmed that the regulation of CodY is indeed modulated by pH and the binding of CodY at neutral pH is further enhanced by a limited supply of glucose (20 mM). In the absence of CodY, the C-terminal domain of the RNA polymerase (RNAP) α subunit interacted with the AT tracks within the CodY box, indicating that CodY and RNAP compete for the same binding region. Such regulation could ensure optimal urease expression when the enzyme is most required, i.e., at an acidic growth pH with an excess amount of carbon nutrients. PMID:24951785

  13. The Impact of CodY on Virulence Determinant Production in Community-Associated Methicillin Resistant Staphylococcus aureus

    OpenAIRE

    Rivera, Frances E.; Miller, Halie K.; Kolar, Stacey L; Stevens, Stanley M.; Shaw, Lindsey N.

    2011-01-01

    Staphylococcus aureus is a leading human pathogen of both hospital and community-associated diseases worldwide. This organism causes a wealth of infections within the human host as a result of the vast arsenal of toxins encoded within its genome. Previous transcriptomic studies have shown that toxin production in S. aureus can be strongly impacted by the negative regulator CodY. CodY acts by directly, and indirectly (via Agr), repressing toxin production during times of plentif...

  14. Using interview-based recall surveys to estimate cod Gadus morhua and eel Anguilla anguilla harvest in Danish recreational fishing

    OpenAIRE

    Sparrevohn, Claus Reedtz; Storr-Paulsen, Marie

    2012-01-01

    Using interview-based recall surveys to estimate cod Gadus morhua and eel Anguilla anguilla harvest in Danish recreational fishing. – ICES Journal of Marine Science, 69: 323–330.Marine recreational fishing is a popular outdoor activity in Denmark, practised by both anglers and passive gear fishers. However, the impact on the targeted stocks is unknown, so to estimate the 2009 harvest of cod Gadus morhua and eel Anguilla anguilla, two separate interview-based surveys were initiated and carried...

  15. Integrated photochemical and biological treatment of a commercial textile surfactant: Process optimization, process kinetics and COD fractionation

    International Nuclear Information System (INIS)

    The biodegradability of surfactants is a frequent and complex issue arising both at domestic as well as industrial treatment facilities. In the present experimental study, the integrated photochemical (H2O2/UV-C) and biochemical (activated sludge) treatment of a commercial grade nonionic/anionic textile surfactant formulation was investigated. Photochemical baseline experiments have shown that once the initial pH and H2O2 dose were optimized, practically complete COD removal (CODo = 500 ± 30 mg L-1) could be achieved. Once the COD was elevated to values being typical for the textile fabric preparation stage, treatment efficiency was seriously retarded provided that the photochemical treatment conditions remained constant. Moreover, a definite relationship existed between H2O2 consumption and COD removal for H2O2/UV-C advanced oxidation of the textile surfactant. In the second part of the study, COD abatement was modeled for the biodegradation of untreated and photochemically pretreated textile surfactant formulation according to their COD fractions. Results have indicated that the readily biodegradable and rapidly hydrolysable COD fractions of the textile surfactant solution could be appreciably increased upon exposure to an optimum H2O2 concentration (60 mM; i.e. 2.1 g H2O2 (g CODo)-1) and extended UV-C irradiation times (i.e. 90 and 120 min)

  16. The effect of microbubbles on gas-liquid mass transfer coefficient and degradation rate of COD in wastewater treatment.

    Science.gov (United States)

    Yao, Kangning; Chi, Yong; Wang, Fei; Yan, Jianhua; Ni, Mingjiang; Cen, Kefa

    2016-01-01

    A commonly used aeration device at present has the disadvantages of low mass transfer rate because the generated bubbles are several millimeters in diameter which are much bigger than microbubbles. Therefore, the effect of a microbubble on gas-liquid mass transfer and wastewater treatment process was investigated. To evaluate the effect of each bubble type, the volumetric mass transfer coefficients for microbubbles and conventional bubbles were determined. The volumetric mass transfer coefficient was 0.02905 s(-1) and 0.02191 s(-1) at a gas flow rate of 0.67 L min(-1) in tap water for microbubbles and conventional bubbles, respectively. The degradation rate of simulated municipal wastewater was also investigated, using aerobic activated sludge and ozone. Compared with the conventional bubble generator, the chemical oxygen demand (COD) removal rate was 2.04, 5.9, 3.26 times higher than those of the conventional bubble contactor at the same initial COD concentration of COD 200 mg L(-1), 400 mg L(-1), and 600 mg L(-1), while aerobic activated sludge was used. For the ozonation process, the rate of COD removal using microbubble generator was 2.38, 2.51, 2.89 times of those of the conventional bubble generator. Based on the results, the effect of initial COD concentration on the specific COD degradation rate were discussed in different systems. Thus, the results revealed that microbubbles could enhance mass transfer in wastewater treatment and be an effective method to improve the degradation of wastewater.

  17. Evaluation of feed COD/sulfate ratio as a control criterion for the biological hydrogen sulfide production and lead precipitation

    International Nuclear Information System (INIS)

    The ability of sulfate-reducing bacteria to produce hydrogen sulfide and the high affinity of sulfide to react with divalent metallic cations represent an excellent option to remove heavy metals from wastewater. Different parameters have been proposed to control the hydrogen sulfide production by anaerobic bacteria, such as the organic and sulfate loading rates and the feed COD/SO42- ratio. This work relates the feed COD/SO42- ratio with the hydrogen sulfide production and dissolved lead precipitation, using ethanol as carbon and energy source in an up-flow anaerobic sludge blanket reactor. A maximum dissolved sulfide concentration of 470 ± 7 mg S/L was obtained at a feed COD/SO42- ratio of 2.5, with sulfate and ethanol conversions of approximately 94 and 87%, respectively. The lowest dissolved sulfide concentration (145 ± 10 mg S/L) was observed with a feed COD/SO42- ratio of 0.67. Substantial amounts of acetate (510-1730 mg/L) were produced and accumulated in the bioreactor from ethanol oxidation. Although only incomplete oxidation of ethanol to acetate was observed, the consortium was able to remove 99% of the dissolved lead (200 mg/L) with a feed COD/SO42- ratio of 1.5. It was found that the feed COD/SO42- ratio could be an adequate parameter to control the hydrogen sulfide production and the consequent precipitation of dissolved lead

  18. A study on the relationship between BOD5 and COD in coastal seawater environment with a rapid BOD measurement system.

    Science.gov (United States)

    Jin, X L; Jing, M; Chen, X; Zhuang, Z X; Wang, X R; Wang, X R; Lee, Frank S C

    2009-01-01

    The dual objectives of this study are to: (1) examine the relationship between COD and BOD in seawater environment with a rapid but reliable method for the measurement of BOD in seawater, and (2) establish the relationship model between BOD(5) and COD in the firth of Dongbao River to predict the values of BOD(5). The first objective is met by the successful development of a technique utilizing bacteria-immobilized membrane flow cell for biodegradation process, coupled with fibre optic fluorescence detection for oxygen depletion quantitation. The technique has been applied to coastal seawater samples collected in the coastal area of Shenzhen, China. The BOD(5) and COD values for the samples are acquired and the results show that there is no apparent linear relationship existing between BOD(5) and COD in relatively clean seawater samples away from the shore. However, in estuary water samples containing relatively high concentration of sewage contamination, a linear correlation does exist between BOD(5) and COD. The linear relationship between the two parameters allows for the calculation of BOD(5) values based on COD data which can be measured more readily and precisely.

  19. A decade of variation of COD in the Changjiang River (Yangtze River) and its variation trend analysis

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    The average annual value of COD (chemical oxygen demand) fluxes of the Changjiang River (Yangtze River) and its main tributaries in the past decade (i.e., 1991-2000), has been evaluated. Based on the data from the Datong Hydrological Station (DHS), it was found that the Dongting Lake drainage basin contributed the greatest water discharge (35.8%) and COD flux (48.3%) among the main tributary drainage basins, followed by the Poyang Lake drainage basin with the contributions of 15.4% and 19.3%,respectively. By the end of the year of 2000, COD flux in the Changjiang River rose by almost 45% relative to that in the year of 1991, reaching about 1941000 ton/a at DHS. Statistical analysis revealed that industrial wastewater discharge, as well as COD in it, was found decreasing in the same period, due to the gradual reinforcement of environmental management. Moreover, correlation analysis indicated that non-point pollution from agriculture and increasing discharge of domestic sewages caused by rapid growth of population along the Changjiang River drainage valley should be responsible for the high COD. Furthermore, with the current trend of population growth and agricultural development in this basin, water quality of the Changjiang River, in terms of COD level, is going to deteriorate in the near future. Thus, the rational applications of fertilizers and pesticides in agriculture and the proper treatment of domestic sewages before they are discharged would be the most concerned controlling parameters.

  20. 22 CFR 120.31 - North Atlantic Treaty Organization.

    Science.gov (United States)

    2010-04-01

    ... DEFINITIONS § 120.31 North Atlantic Treaty Organization. North Atlantic Treaty Organization (NATO) is..., France, Germany, Greece, Hungary, Iceland, Italy, Latvia, Lithuania, Luxembourg, The Netherlands,...

  1. North Atlantic summers have warmed more than winters since 1353, and the response of marine zooplankton

    Science.gov (United States)

    Kamenos, Nicholas A.

    2010-01-01

    Modeling and measurements show that Atlantic marine temperatures are rising; however, the low temporal resolution of models and restricted spatial resolution of measurements (i) mask regional details critical for determining the rate and extent of climate variability, and (ii) prevent robust determination of climatic impacts on marine ecosystems. To address both issues for the North East Atlantic, a fortnightly resolution marine climate record from 1353–2006 was constructed for shallow inshore waters and compared to changes in marine zooplankton abundance. For the first time summer marine temperatures are shown to have increased nearly twice as much as winter temperatures since 1353. Additional climatic instability began in 1700 characterized by ∼5–65 year climate oscillations that appear to be a recent phenomenon. Enhanced summer-specific warming reduced the abundance of the copepod Calanus finmarchicus, a key food item of cod, and led to significantly lower projected abundances by 2040 than at present. The faster increase of summer marine temperatures has implications for climate projections and affects abundance, and thus biomass, near the base of the marine food web with potentially significant feedback effects for marine food security. PMID:21148422

  2. Parasites as biological tags in marine fisheries research: European Atlantic waters.

    Science.gov (United States)

    Mackenzie, K; Hemmingsen, W

    2015-01-01

    Studies of the use of parasites as biological tags for stock identification and to follow migrations of marine fish, mammals and invertebrates in European Atlantic waters are critically reviewed and evaluated. The region covered includes the North, Baltic, Barents and White Seas plus Icelandic waters, but excludes the Mediterranean and Black Seas. Each fish species or ecological group of species is treated separately. More parasite tag studies have been carried out on Atlantic herring Clupea harengus than on any other species, while cod Gadus morhua have also been the subject of many studies. Other species that have been the subjects of more than one study are: blue whiting Micromesistius poutassou, whiting Merlangius merlangus, haddock Melanogrammus aeglefinus, Norway pout Trisopterus esmarkii, horse mackerel Trachurus trachurus and mackerel Scomber scombrus. Other species are dealt with under the general headings redfishes, flatfish, tunas, anadromous fish, elasmobranchs, marine mammals and invertebrates. A final section highlights how parasites can be, and have been, misused as biological tags, and how this can be avoided. It also reviews recent developments in methodology and parasite genetics, considers the potential effects of climate change on the distributions of both hosts and parasites, and suggests host-parasite systems that should reward further research.

  3. Prevalence of influenza A virus in live-captured North Atlantic gray seals: a possible wild reservoir.

    Science.gov (United States)

    Puryear, Wendy Blay; Keogh, Mandy; Hill, Nichola; Moxley, Jerry; Josephson, Elizabeth; Davis, Kimberly Ryan; Bandoro, Chistopher; Lidgard, Damian; Bogomolni, Andrea; Levin, Milton; Lang, Shelley; Hammill, Michael; Bowen, Don; Johnston, David W; Romano, Tracy; Waring, Gordon; Runstadler, Jonathan

    2016-01-01

    Influenza A virus (IAV) has been associated with multiple unusual mortality events (UMEs) in North Atlantic pinnipeds, frequently attributed to spillover of virus from wild-bird reservoirs. To determine if endemic infection persists outside of UMEs, we undertook a multiyear investigation of IAV in healthy, live-captured Northwest Atlantic gray seals (Halichoerus grypus). From 2013 to 2015, we sampled 345 pups and 57 adults from Cape Cod, MA, USA and Nova Scotia, Canada consistently detecting IAV infection across all groups. There was an overall viral prevalence of 9.0% (95% confidence interval (CI): 6.4%-12.5%) in weaned pups and 5.3% (CI: 1.2%-14.6%) in adults, with seroprevalences of 19.3% (CI: 15.0%-24.5%) and 50% (CI: 33.7%-66.4%), respectively. Positive sera showed a broad reactivity to diverse influenza subtypes. IAV status did not correlate with measures of animal health nor impact animal movement or foraging. This study demonstrated that Northwest Atlantic gray seals are both permissive to and tolerant of diverse IAV, possibly representing an endemically infected wild reservoir population. PMID:27485496

  4. Impacts of COD and DCP loading rates on biological treatment of 2,4-dichlorophenol (DCP) containing wastewater in a perforated tubes biofilm reactor.

    Science.gov (United States)

    Eker, Serkan; Kargi, Fikret

    2006-08-01

    Biofilm processes offer considerable advantages for biological treatment of chlorophenol containing wastewaters since such industrial effluents are difficult to treat by conventional activated sludge processes. A rotating perforated tubes biofilm reactor (RTBR) was developed and used for treatment of 2,4-dichlorophenol (DCP) containing synthetic wastewater. Effects of COD and DCP loading rates on COD, DCP and toxicity removals were investigated. Percent COD removal decreased and effluent COD increased with increasing COD and DCP loading rates due to toxic effects of high DCP content in the feed. DCP and toxicity removals showed similar trends. As the DCP loading rate increased the effluent DCP content increased yielding high toxicity levels in the effluent. COD and DCP loading rates should be below 90gCODm(-2)d(-1) and 2.8gDCPm(-2)d(-1) in order to obtain more than 90% DCP and toxicity removals. However, DCP loading rates lower than 1gDCPm(-2)d(-1) are required to obtain more than 90% COD removal. Empirical equations were developed to estimate percent COD, DCP and toxicity removals as functions of COD and DCP loading rates. The coefficients of the empirical equations were determined by using the experimental data. Empirical model predictions for percent COD, DCP and toxicity removals were in good agreement with the experimental data.

  5. COD BO

    Institute of Scientific and Technical Information of China (English)

    华尔兹

    2011-01-01

    这张丧尸地图之所以选择香格里拉为背景,是因为相传纳粹曾经想在这里实行大屠杀。而这次专杀丧尸的4小强来到这里就是要寻找到一种藏在番格里拉的神奇力量。

  6. Electro Coagulation Efficiency in Removal of COD from the Qom Landfill Leahate

    Directory of Open Access Journals (Sweden)

    Mohammad Malakootian

    2012-10-01

    Full Text Available Normal 0 false false false EN-US X-NONE AR-SA MicrosoftInternetExplorer4 Background and Objectives: leachate from municipal solid waste landfill is a strong sewage having hazardous toxic substances. It should be treated by choosing a simple, economical, and eco-friendly method. The aim of this study is reduction of COD from the Qom City landfill leachate using electrocoagulation process.   Materials and Methods: The experimental study was carried out at bench scale using a batch reactor during 2010.  We used a Plexiglas reactor having 0.7 liter capacity, containing nine plate aluminum electrodes connected to a DC power supply (10-60V, 1-5A. Samples were collected in the middle of cell at regular (every 10 minutes time intervals. The concentration of COD was determined using a COD analyzer. The effects of different parameters including current density (52.08, 69.44 mA/cm2, electrolyte time (10, 20,30,40,50 and 60 min, and voltage range (10, 20, 30, 40, 50 and 60 volt were investigated.Results: For a voltage of 60 V and electrolysis time 60 min, the COD removal efficiency was increased from 48.7% for 52.08 mA/cm2 to 77.4% for 69.44 mA/cm2. The highest TSS removal efficiency was obtained at the largest current input when the voltage and electrolysis time were kept at 60V and 60 min respectively.Conclusion: The results showed that the highest COD removal efficiency (77.4% was obtained when the current density was 69.44 Ma/cm2 and the voltage and electrolysis time were kept at 60V and 60 min respectively. Power consumption for this removal level was measured to be 431.26 kWh per kg COD removal. The results obtained revealed that the electrocoagulation technology is an effective treatment process for landfill leachate. st1":*{behavior:url(#ieooui } /* Style Definitions */ table.MsoNormalTable {mso-style-name:"Table Normal"; mso-tstyle-rowband-size:0; mso-tstyle-colband-size:0; mso-style-noshow:yes; mso-style-priority:99; mso-style-qformat:yes; mso

  7. OPTIMASI PENURUNAN NILAI BOD, COD DAN TSS LIMBAH CAIR INDUSTRI TAPIOKA MENGGUNAKAN ARANG AKTIF DARI AMPAS KOPI

    Directory of Open Access Journals (Sweden)

    Irmanto

    2010-05-01

    Full Text Available Activated carbon from coffee dregs for TSS, BOD and COD removal of tapioca industrial wastewater has been developed. The research aimed to know the quality of activated carbon from dregs of coffee as adsorbent, consist of total rendemen, water content, ashes content and iodium adsorption; to know about the optimum contact time and optimum pH from activated carbon on reducing BOD, COD and TSS value from tapioca industrial wastewater and also to know about the decrease percentage of BOD, COD and TSS value using activated carbon from dregs of coffee. Activated carbon from dregs of coffee are activated using HCl 0,1 N and carbonization at 350°C in muffle furnace. Then, activated carbon was contacted with the tapioca industrial wastewater and used on decreasing BOD, COD and TSS value from tapioca industrial wastewater with contact time varieties 0, 10, 30, 60, 90 and 120 minutes and at pH varieties of wastewater 4, 5, 6, 7, 8, 9 and 10. The decreasing of BOD value was measured by Winkler method, decreasing of COD value measured by iodometric method and decreasing of TSS value measured by gravimetric method. The result of the research showed that the activated carbon produced characteristic consist of rendemen 14,55%; water content 3,4%; ashes content 1,88% and iodium adsorption 750,25 mg/g. It is indicated that the activated carbon that is got from dregs of coffee fulfill the criteria required by SNI No. 06-3730-1995. The result of research also showed that the activated carbon from dregs of coffee could be used for reducing the BOD, COD and TSS value in tapioca industrial wastewater at the optimum contact time of 30 minutes and pH 7. The optimum percentage of activated carbon from dregs of coffee in decreasing BOD value of tapioca industrial wastewater are 33,51%; COD value 78,96% and TSS value 61,05%.

  8. Fishing cod in the Baltic Sea - Gambling with the ecosystem services

    Science.gov (United States)

    Björkman, Sven; Nordlöf, Anders

    2014-05-01

    The population of cod in the Baltic sea has over the last decades decreased due to overfishing. To make the students aware of this problem and also to find a solution they are introduced to a game. The purpose of the game is to let the students know how to use renewable natural resources in these aspects; 1 Fishing cod without using it up 2 That solidarity is needed if you are sharing a resource 3 That cooperation is the key to keeping a natural resource healthy. The students are fishermen in group of four and are equipped with a boat. The playing board is a map over the Baltic sea. The rules of the game include the carrying capacity of the sea, how much fish one fishing boat is allowed to pick up, how much it costs to have a boat, and possibilities to buy a bigger boat. The game has two rounds: In round one the students in the group are competing against each other, they are not allowed to talk to each other and they are supposed to get as much fish as they can. As a consequence after round one the sea will become empty. In round two the groups compete with each other and they are coworking within the group. After this round the result is different from the first round. The catches are bigger than in round one and still there are cod left in the sea, which will generate a good fishing in the future.. The discussions after the game can be about why the two rounds ended so different, general discussion about "tragedy of the commons", sustainable use of ecosystem services and discussions about resources in common.

  9. Effect of Vermifiltration on COD and Color Removal from Textile Factories’ Waste Water

    Directory of Open Access Journals (Sweden)

    Rabbani D.1 PhD,

    2015-09-01

    Full Text Available Aims Textile industries are among the manufactures which produce the highly polluted waste water. The purpose of this research was to evaluate the effect of vermifiltration on COD and color removal from textile waste water. Materials & Methods This experimental research was performed March to August 2014 in one of the textile factories of Kashan region, Iran. The glass cubic kits with- without Eisenia fetida were used to filter the waste water samples. Data was analyzed using Kruskal–Wallis and two-way analysis of variance in SPSS 19 statistical software. Findings The mean of COD concentration in the raw waste water samples was 1324.24±757.01mg/l which was decreased to 598.22±349.33 and 831.32±445.19mg/l after the experimental and control kits usage, respectively (p<0.001. The mean of color intensity in raw waste water samples was 51.2±30.6% which was decreased to 27.8±15.0 and 27.4±15.1% (p=0.635 in experimental and control kits, respectively. There was a significant negative correlation between COD removal and hydraulic loads (p<0.001; r=-0.804 and a significant negative correlation between color removal and hydraulic loads (p<0.001; r=- 0.278 in both experimental and control kits. Conclusion The most important risk groups in our study were abattoir workers, butchers, housewives and students who handle infected animals.

  10. Optimization study for Pb(II) and COD sequestration by consortium of sulphate-reducing bacteria

    Science.gov (United States)

    Verma, Anamika; Bishnoi, Narsi R.; Gupta, Asha

    2016-04-01

    In this study, initial minimum inhibitory concentration (MIC) of Pb(II) ions was analysed to check optimum concentration of Pb(II) ions at which the growth of sulphate-reducing consortium (SRC) was found to be maximum. 80 ppm of Pb(II) ions was investigated as minimum inhibitory concentration for SRC. Influence of electron donors such as lactose, sucrose, glucose and sodium lactate was examined to investigate best carbon source for growth and activity of sulphate-reducing bacteria. Sodium lactate was found to be the prime carbon source for SRC. Later optimization of various parameters was executed using Box-Behnken design model of response surface methodology to explore the effectiveness of three independent operating variables, namely, pH (5.0-9.0), temperature (32-42 °C) and time (5.0-9.0 days), on dependent variables, i.e. protein content, precipitation of Pb(II) ions, and removal of COD by SRC biomass. Maximum removal of COD and Pb(II) was observed to be 91 and 98 %, respectively, at pH 7.0 and temperature 37 °C and incubation time 7 days. According to response surface analysis and analysis of variance, the experimental data were perfectly fitted to the quadratic model, and the interactive influence of pH, temperature and time on Pb(II) and COD removal was highly significant. A high regression coefficient between the variables and response (r 2 = 0.9974) corroborate eminent evaluation of experimental data by second-order polynomial regression model. SEM and Fourier transform infrared analysis was performed to investigate morphology of PbS precipitates, sorption mechanism and involved functional groups in metal-free and metal-loaded biomass of SRC for Pb(II) binding.

  11. Anodic oxidation of coke oven wastewater: Multiparameter optimization for simultaneous removal of cyanide, COD and phenol.

    Science.gov (United States)

    Sasidharan Pillai, Indu M; Gupta, Ashok K

    2016-07-01

    Anodic oxidation of industrial wastewater from a coke oven plant having cyanide including thiocyanate (280 mg L(-1)), chemical oxygen demand (COD - 1520 mg L(-1)) and phenol (900 mg L(-1)) was carried out using a novel PbO2 anode. From univariate optimization study, low NaCl concentration, acidic pH, high current density and temperature were found beneficial for the oxidation. Multivariate optimization was performed with cyanide including thiocyanate, COD and phenol removal efficiencies as a function of changes in initial pH, NaCl concentration and current density using Box-Behnken experimental design. Optimization was performed for maximizing the removal efficiencies of these three parameters simultaneously. The optimum condition was obtained as initial pH 3.95, NaCl as 1 g L(-1) and current density of 6.7 mA cm(-2), for which the predicted removal efficiencies were 99.6%, 86.7% and 99.7% for cyanide including thiocyanate, COD and phenol respectively. It was in agreement with the values obtained experimentally as 99.1%, 85.2% and 99.7% respectively for these parameters. The optimum conditions with initial pH constrained to a range of 6-8 was initial pH 6, NaCl as 1.31 g L(-1) and current density as 6.7 mA cm(-2). The predicted removal efficiencies were 99%, 86.7% and 99.6% for the three parameters. The efficiencies obtained experimentally were in agreement at 99%, 87.8% and 99.6% respectively. The cost of operation for degradation at optimum conditions was calculated as 21.4 USD m(-3). PMID:27039363

  12. SIMULASI PENGARUH KONSENTRASI BIOMASSA PADA LUMPUR AKTIF TERHADAP PENYISIHAN COD DALAM BIOREAKTOR MEMBRAN TERENDAM

    Directory of Open Access Journals (Sweden)

    A. E. Palupi

    2012-02-01

    Full Text Available Proses pengolahan limbah cair dengan bioreaktor membran terendam (BRMt, mempunyai banyak keuntungan dibandingkan proses lumpur aktif konvensional, karena prosesnya lebih sederhana, tidak memerlukan bak sedimentasi sekunder dan kandungan solid dalam efluen (permeat hampir tidak ada. Dalam proses ini melibatkan tiga fasa yaitu padat (biomassa dan komponen-komponen limbah, cair (air dan gas (udara untuk aerasi, dimana degradasi biologis yang terjadi sangat dipengaruhi oleh transfer massa lintas membran, sehingga diperlukan analisa teoritis terhadap proses degradasi limbah pada BRMt dengan model matematis yang dapat menjelaskan fenomena sistemnya, yaitu laju degradasi limbah (SS dan XS, laju pertumbuhan biomassa heterotrop (XBH, laju pembentukan SMP (soluble microbial product, kelarutan oksigen (SO, dan jumlah senyawa organik inert (SI dan XI. Penelitian ini bersifat simulasi yang menggabungkan antara model matematis aktivitas biologis dan performance membran menjadi satu model yang dapat digunakan untuk menghitung COD total pada setiap waktu. Hasil simulasi divalidasi dengan hasil analisa laboratorium dengan limbah cair domestik sintetis sebagai umpan. Secara teoritis, proses degradasi limbah BRMt terdiri dari tujuh komponen yang saling terkait yaitu Ss, Xs, XBH, SSMP, SO, SI dan XI. Model matematis yang diperoleh dapat menjelaskan fenomena terjadinya degradasi limbah domestik sintesis dan akumulasi partikulat inert. Simulasi menunjukkan hasil yang cukup bagus untuk memprediksikan pengolahan limbah cair dengan lumpur aktif dan separasi membran dalam satu reaktor. Dibandingkan dengan hasil percobaan, ditemukan nilai parameter baru untuk pengolahan limbah domestik sintesis dengan lumpur aktif, yaitu YH  = 0,46; μH = 1,5 hari-1; bH = 10,5 hari-1; KS = 1000 g COD/m3; KOH =0,5 g O2/m3; KSMP =15 g COD/m3.

  13. Evaluation of occasional nonresponse of a washed cod mince model to hemoglobin (Hb)-mediated oxidation.

    Science.gov (United States)

    Sannaveerappa, Thippeswamy; Sandberg, Ann-Sofie; Undeland, Ingrid

    2007-05-30

    An emerging model to test antioxidants for application in seafoods is washed cod mince fortified with hemoglobin (Hb) as a catalyst. This system has been used to test the antioxidative activity of certain muscle extracts and some pure compounds such as BHA, BHT, TBHQ, and propyl gallate during ice storage. However, the washed cod mince model has occasionally been resistant to Hb-mediated oxidation. This has been in cases when the moisture of the model has been minimized by washes at the protein isoelectric point (pH approximately 5.5) to allow for large additions of potentially antioxidative solutions. In this paper, noncontrollable and controllable factors for this intriguing occasional oxidation resistance were studied. Compositional analyses (lipid content, alpha-tocopherol, and lipid hydroperoxides) and structural analysis of a "normal" oxidizing model and a stable model were done to identify any differences among them. Some controllable factors related to the model preparation that were studied included different washing pH values (5.5-6.6), Hb concentrations (7.2 and 13.5 microM), final model moisture contents (75, 81, and 90%), and light exposure during ice storage (0 h, 3-4 h, or 24 h of light/day). Results revealed a 2-fold higher alpha-tocopherol content in the stable model than in the oxidizing model. Electron microscopy images showed a more and less disrupted myofibrillar structure in the stable and the oxidizing cod model, respectively. This indicated that "cold setting" (i.e., pre-gelation) of the stable model may have occurred and prevented Hb from diffusing freely in the model. Controllable factors that reduced lipid oxidation in the models were less Hb and lower moisture. PMID:17461593

  14. Atlantic hurricane response to geoengineering

    Science.gov (United States)

    Moore, John; Grinsted, Aslak; Ji, Duoying; Yu, Xiaoyong; Guo, Xiaoran

    2015-04-01

    Devastating Atlantic hurricanes are relatively rare events. However their intensity and frequency in a warming world may rapidly increase - perhaps by a factor of 5 for a 2°C mean global warming. Geoengineering by sulphate aerosol injection preferentially cools the tropics relative to the polar regions, including the hurricane main development region in the Atlantic, suggesting that geoengineering may be an effective method of controlling hurricanes. We examine this hypothesis using 6 Earth System Model simulations of climate under the GeoMIP G3 and G4 schemes that use aerosols to reduce the radiative forcing under the RCP4.5 scenario. We find that although temperatures are ameliorated by geoengineering, the numbers of storm surge events as big as that caused the 2005 Katrina hurricane are only slightly reduced compared with no geoengineering. As higher levels of sulphate aerosol injection produce diminishing returns in terms of cooling, but cause undesirable effects in various regions, it seems that stratospheric aerosol geoengineering is not an effective method of controlling hurricane damage.

  15. COMPARISON OF THE FRACTIONS OF COD IN RAW WASTEWATER INFLUENT FOR SMALL AND LARGE SEWAGE TREATMENT

    OpenAIRE

    Joanna Smyk; Katarzyna Ignatowicz

    2016-01-01

    The article presents a comparison of the share fraction of COD in raw wastewater in treatment plants which flow in a small amount of wastewater and the sewage treatment with high flow. Compared the constructed wetlands with an average capacity of 4 dm3/m,, the treatment plant with biological deposits with an average capacity of 8 dm3/m, and a sewage treatment plant with activated sludge in Bialystok with a capacity of about 70 000 dm3/m. The lowest percentages of dissolved fraction of sol...

  16. A NUMERICAL MODEL OF FAR-FIELD COD CONCENTRATION DISTRIBUTION FOR NATURAL RIVER

    Institute of Scientific and Technical Information of China (English)

    2000-01-01

    A far-field numerical model is developed to simulate jet pollution into natural rivers. Its character is to compute the velocity and pollution concentration separately. The velocity is computed by SIMPLEC algorithm in boundary-fitted coordinate systems. The pollution concentration distribution is computed by developed QUAL-IIm and QAIIL 2D program. The present model was applied to the Xiantao section of the Hanjiang River a tributary of Yangtze River, and Xiangjiang River. The flow field and COD distribution are in good agreement with field data.

  17. CONCEPT - The COsmological $N$-body CodE in PyThon

    OpenAIRE

    Dakin, Jeppe

    2015-01-01

    CO$N$CEPT (COsmological $N$-body CodE in PyThon) is a free and open-source code for cosmological $N$-body simulations on massively parallel computers with distributed memory. Collisionless dark matter is the only implemented particle species. Gravity can be computed using the PP, PM or the P$^{3}$M algorithm. The goal of CO$N$CEPT is to make it pleasant to work with cosmological $N$-body simulations - for the cosmologist as well as for the source code developer. This is the user guide. The so...

  18. Warm, windy winters drive cod north and homing of spawners keeps them there

    DEFF Research Database (Denmark)

    Rindorf, Anna; Lewy, Peter

    2006-01-01

    and human exploitation. This stock has experienced a series of poor recruitments since the late 1990s and, concomitant with the decrease in abundance, the distribution of cod has changed. While it has been suggested that the change in distribution can be linked to increasing temperatures and fishing...... shift of the spawners further augmented that of the new recruits. 4. Although fishing mortality on a North Sea scale was not directly correlated with the displacement of any of the age groups, fishing has severely decreased the number of fish in older age groups. This increased the sensitivity of the...... unlikely to result in improved recruitment to the southern North Sea....

  19. Removal of color, COD and lignin of pulp and paper wastewater using wood ash

    OpenAIRE

    Netnapid Tantemsapya; Santi Sakolchai; Wanpen Wirojanagud

    2004-01-01

    This study focused on removal of color, COD, and lignin in wastewater of pulp and paper mill using white wood ash and black wood ash that generated from boilers unit in the pulp and paper mill. Batch experiments were setup for studying the equilibrium time, pH, quantity of wood ash and adsorption isotherm. The results from the equilibrium time experiment concluded that the equilibrium time of the white wood ash is much more rapid than the black wood ash indicated as 2 minutes and 25 minutes, ...

  20. MOLECULAR IDENTIFICATION OF Pseudoterranova azarasi LARVAE IN COD (Gadus sp.) SOLD FOR HUMAN CONSUMPTION IN BRAZIL.

    Science.gov (United States)

    Marigo, Juliana; Taniwaki, Sueli Akemi; Pinto, Pedro Luiz Silva; Soares, Rodrigo Martins; Catão-Dias, José Luiz

    2015-12-01

    Anisakiasis and Pseudoterranovosis are human diseases caused by the ingestion of live Anisakidae larvae in raw, undercooked or lightly marinated fish. Larvae were collected from one salted cod sold for human consumption in a Sao Paulo market in 2013. One section of one brownish larva was used for molecular analyses. The partial COX2 gene sequence from the larva had a nucleotide identity of 99.8 % with Pseudoterranova azarasi, which belongs to the Pseudoterranova decipiens species complex. The risk of allergy when consuming dead larvae in salted fish is not well known and should be considered.

  1. Feeding habits of Pacific cod larvae and juveniles in Mutsu Bay, Japan

    OpenAIRE

    Takatsu, Tetsuya; NAKATANI, Toshikuni; MUTOH, Takashi; Takahashi, Toyomi

    1995-01-01

    The diets and prey widths of Pacific cod (Gadus macrocephalus) larvae and juveniles were examined in Mutsu Bay. In early March, 11 yolk-sac larvae were caught in midwater of the bay mouth. Five of 11 larvae captured had not opened their mouths, and the remaining six had not fed. Post-larvae ≤ 7mm in total length (TL) fed on copepod nauplii, particularly Pseudocalanus nauplii. Prey items of post-larvae >7mm TL were chiefly crustacean eggs, and Pseudocalanus spp. copepodites and adults. From Ap...

  2. Changes in the timing of spawning of Baltic cod : possible causes and implications for recruitment

    DEFF Research Database (Denmark)

    Wieland, Kai; Jarre, Astrid; Horbowa, K.

    2000-01-01

    Interannual variations in spawning time, defined as the peak in egg abundance, of cod (Gadus morhua) in the Bornholm Basin, Baltic Sea, were analysed. Effects of water temperature, size and age structure of the spawning stock, abundance of food, and timing of spawning in preceding years were...... temperature during the period of gonadal maturation, density-dependent processes related to the size of the spawning stock, and food availability. The age structure of the spawning stock is suggested to have an additional effect. A high proportion of first-time spawners and decreasing water temperature have...

  3. PENURUNAN BOD DAN COD LIMBAH CAIR INDUSTRI TEKSTIL DI KABUPATEN PEKALONGAN DENGAN METODE MULTI SOIL LAYERING

    OpenAIRE

    Irmanto; Suyata

    2008-01-01

    Multi Soil Layering (MSL) system is a method of wastewater treatment that increase the soils function to purify wastewater. In the construction of MSL, soils mixed with the charcoal and then filled into the box of size 50x14x50 cm in layers structured like brick pattern. The aims of this research are to determine the concentration of BOD and COD on textile industrial wastewater before and after the process by MSL method. It also determines the optimal loading rate of wastewater on the MSL sys...

  4. Topical Formulation Comprising Fatty Acid Extract from Cod-liver Oil: Development, Evaluation and Stability Studies

    OpenAIRE

    Ilievska, Biljana

    2016-01-01

    The current study was designed to develop a pharmaceutical formulation that contained fish oil extract rich in free omega 3 FAs such as EPA and DHA for topical use. Although the health benefits of cod-liver oil and other fish oils taken as a dietary supplement have been vastly acknowledged and exploited, it is clear that their use could be further extended to cover other biological properties. Based on in vitro evaluation, 20% (v/v) fish oil extract was found to be highly potent against gram-...

  5. Eel, cod and seatrout harvest in Danish recreational fishing during 2011

    OpenAIRE

    Sparrevohn, Claus Reedtz; Storr-Paulsen, Marie

    2012-01-01

    Marine recreational fishing is a popular outdoor leisure activity, yet the impact on the targeted stocks is often unidentified. In order to estimate 2011 cod, eel and seatrout harvest (fish caught and kept) in the Danish angling and passive gear fishing, two interview surveys were conducted in July 2011 and January 2012. Recreational fishing was separated into anglers (with rod and reel) and passive gear fishing (fyke and gillnets). In 2011 a total of 157,762 anglers and 33,911 passive gear f...

  6. CONCEPT - The COsmological $N$-body CodE in PyThon

    CERN Document Server

    Dakin, Jeppe

    2015-01-01

    CO$N$CEPT (COsmological $N$-body CodE in PyThon) is a free and open-source code for cosmological $N$-body simulations on massively parallel computers with distributed memory. Collisionless dark matter is the only implemented particle species. Gravity can be computed using the PP, PM or the P$^{3}$M algorithm. The goal of CO$N$CEPT is to make it pleasant to work with cosmological $N$-body simulations - for the cosmologist as well as for the source code developer. This is the user guide. The source code and additional documentation can be found at https://github.com/jmd-dk/concept/

  7. Localisation of nursery areas based on comparative analyses of the horizontal and vertical distribution patterns of juvenile Baltic cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Nielsen, J. Rasmus; Lundgren, Bo; Kristensen, Kasper;

    2013-01-01

    Knowledge of the spatial distribution of juvenile cod is essential for obtaining precise recruitment data to conduct sustainable management of the eastern and western Baltic cod stocks. In this study, the horizontal and vertical distribution and density patterns of settled juvenile 0- and 1-group...... and acoustic research surveys. Horizontal distribution maps for the 2001–2010 cohorts of juvenile cod are further generated by applying a statistical log-Gaussian Cox process model to the standard trawl survey data. The analyses indicate size-dependent horizontal and distinct vertical and diurnal distribution...... patterns related to the seabed topography, water layer depth, and the presence of hydrographic frontal zones (pycnoclines) as well as intraspecific patterns in relation to the presence of adult cod. The extent of the nursery areas also depends on the cod year class strength. Juvenile cod (≥3 cm...

  8. Variation in abundance, diet, otolith zone patterns and black spot disease (Cryptocotyle lingua) of 0-group coastal cod (Gadus morhua L.) in northern Norway

    OpenAIRE

    Sandneseng, Elida

    2006-01-01

    Knowledge of the early life-history and habitat requirements of coastal cod is very sparse. Young of the year cod juveniles from three different locations in northern Norway were collected monthly from August to November 2005 using beach seine. Diet analyses based on stomach contents showed that 0-group cod mainly ate copepods, gammarids, polychaetes, mysids, shrimps and isopods. The three locations differed with regard to prey composition, and copepods were generally most abun...

  9. COD and J integral toughness testing of medium strength steel as a preliminary for J integral testing of SA 533 B steel

    International Nuclear Information System (INIS)

    This report is a continuation of the initial development work towards the single specimen J integral determination for Koeberg pressure vessel steel and aims to help clarify the reproducibility and sensitivity of firstly the multiple specimen COD technique and secondly the multiple specimen J integral techniques using a medium strenght steel. The objective of this presant study was to consolidate work already done which effectively measured initiation COD in Roqtuff material, by repeating COD tests and concomitantly estimating the corresponding J integral values

  10. Comparison of COD removal from pharmaceutical wastewater by electrocoagulation, photoelectrocoagulation, peroxi-electrocoagulation and peroxi-photoelectrocoagulation processes.

    Science.gov (United States)

    Farhadi, Sajjad; Aminzadeh, Behnoush; Torabian, Ali; Khatibikamal, Vahid; Alizadeh Fard, Mohammad

    2012-06-15

    This work makes a comparison between electrocoagulation (EC), photoelectrocoagulation, peroxi-electrocoagulation and peroxi-photoelectrocoagulation processes to investigate the removal of chemical oxygen demand (COD) from pharmaceutical wastewater. The effects of operational parameters such as initial pH, current density, applied voltage, amount of hydrogen peroxide and electrolysis time on COD removal efficiency were investigated and the optimum operating range for each of these operating variables was experimentally determined. In electrocoagulation process, the optimum values of pH and voltage were determined to be 7 and 40 V, respectively. Desired pH and hydrogen peroxide concentration in the Fenton-based processes were found to be 3 and 300 mg/L, respectively. The amounts of COD, pH, electrical conductivity, temperature and total dissolved solids (TDS) were on-line monitored. Results indicated that under the optimum operating range for each process, the COD removal efficiency was in order of peroxi-electrocoagulation > peroxi-photoelectrocoagulation > photoelectrocoagulation>electrocoagulation. Finally, a kinetic study was carried out using the linear pseudo-second-order model and results showed that the pseudo-second-order equation provided the best correlation for the COD removal rate.

  11. COD removal from real semi-coke wastewater by electro-Fenton technology%电芬顿法去除兰炭废水COD

    Institute of Scientific and Technical Information of China (English)

    毕强; 薛娟琴; 郭莹娟; 李国平; 雷美美

    2012-01-01

    An improved electro-Fenton technology with stainless steel anode and cathode of graphite-based gas diffusion electrode is introuced in this work to enhance removal rate of COD in semi-coke wastewater which is famous for high treatment cost as its biodegradation is hard. By several exhaustive experiments, the optimum re- moval rate of COD is up to 78.62% at the optimized conditions in the laboratory of the oxygen sparging rates of 2.5 L/min, the optimal electrode plates distance of 2 cm, current density of 5.2 mA/cm2 , solution pH of 3, and duration of 240 min, which provides a high efficiency pretreatment for semi-coke wastewater, and an promis- ing new method for the treatment of non-biodegradable high concetration wastewater in the future.%为处理高浓度生物难降解兰炭废水,考查了利用不锈钢作阳极和石墨气体扩散电极作阴极构成的电芬顿体系对兰炭废水COD的去除效果。系统地考察了空气流速、电流密度、溶液pH值及极板间距等因素对废水COD去除率的影响。电解过程的较佳条件:空气流速为2.5L/min;电流密度为5.2mA/cm^2;溶液pH值为3;极板间距为2cm。电芬顿法处理兰炭废水240min之后,COD最高去除率可达78.62%,实现了对兰炭废水的预处理,为兰炭废水的处理提供了新的途径。

  12. PREDICTION OF BOD AND COD OF A REFINERY WASTEWATER USING MULTILAYER ARTIFICIAL NEURAL NETWORKS

    Directory of Open Access Journals (Sweden)

    Eldon Raj Rene

    2008-06-01

    Full Text Available In the recent past, artificial neural networks (ANNs have shown the ability to learn and capture non-linear static or dynamic behaviour among variables based on the given set of data. Since the knowledge of internal procedure is not necessary, the modelling can take place with minimum previous knowledge about the process through proper training of the network. In the present study, 12 ANN based models were proposed to predict the Biochemical Oxygen Demand (BOD5 and Chemical Oxygen Demand (COD concentrations of wastewater generated from the effluent treatment plant of a petrochemical industry. By employing the standard back error propagation (BEP algorithm, the network was trained with 103 data points for water quality indices such as Total Suspended Solids (TSS, Total Dissolved Solids (TDS, Phenol concentration, Ammoniacal Nitrogen (AMN, Total Organic Carbon (TOC and Kjeldahl’s Nitrogen (KJN to predict BOD and COD. After appropriate training, the network was tested with a separate test data and the best model was chosen based on the sum square error (training and percentage average relative error (% ARE for testing. The results from this study reveal that ANNs can be accurate and efficacious in predicting unknown concentrations of water quality parameters through its versatile training process.

  13. Efficacy of HRF in COD Removal from Secondary Effluent of Yasuj Municipal Wastewater

    Directory of Open Access Journals (Sweden)

    M Ehteshami

    2011-10-01

    Full Text Available Background & Aim: Re-use of wastewater is an appropriate approach for development of water resources and water supply strategies. The purpose of this study was to determine the efficacy of HRF in COD removal from secondary effluent of municipal wastewater in Yasouj. Methods: The pilot which was used in the present study was a horizontal roughing filter designed and prepared according to the Wegelin’s Design Criteria. The Samples were removed daily and instantaneous based on the predicted number of samples (28 samples at each filtration rate from the input and output filter, and then tested in the laboratory by the D5000 device. The collected data was analyzed using ANOVA and paired t-test. Results: The results indicated that the average COD removal in the filtration rate of 0.5, 1, and 1.5 were 60, 51, and 38 percent respectively. Conclusion: The average output of the HRF for all three filtration rates was lower than the maximum EPA standard of Iran.

  14. [Assessment on the COD discharge status of municipal wastewater treatment plant in a city of China].

    Science.gov (United States)

    Zhou, Yu-Hua; Lu, Yan-Na; Zhang, Yu; Zhu, Jing; Lei, Jing; Shen, Chen; Wu, Xue-Fang

    2014-10-01

    Based on the statistical theory, the paper collected routine monitoring data for 3 years of 11 municipal wastewater treatment plants with secondary treatment or enhanced secondary treatment in a northern city in China, and analysis of the discharge concentration distribution of COD showed a Delta-lognormal distribution. On this basis, referring to the formulation methods of water pollutant discharge limits used in the USA, the paper studied and assessed the discharge status of COD of the municipal wastewater treatment plants in the city, including the daily maximum and the monthly average discharge status, and came to the conclusion that the daily maximum discharge status met the first grade A class discharge standard (50 mg · L(-1)) required by the Discharge Standard of Pollutants for Municipal Wastewater Treatment Plant (GB 18918-2002). Meanwhile, the assessment conclusion was obtained for the monthly average discharge status, and the conclusions were discussed. The assessment method and the conclusions in this paper might provide reference for formulation and revision of water discharge standards. PMID:25693413

  15. Topical Formulation Comprising Fatty Acid Extract from Cod Liver Oil: Development, Evaluation and Stability Studies.

    Science.gov (United States)

    Ilievska, Biljana; Loftsson, Thorsteinn; Hjalmarsdottir, Martha Asdis; Asgrimsdottir, Gudrun Marta

    2016-06-01

    The purpose of this study was to develop a pharmaceutical formulation containing fatty acid extract rich in free omega-3 fatty acids such as eicosapentaenoic acid and docosahexaenoic acid for topical use. Although the health benefits of cod liver oil and other fish oils taken orally as a dietary supplement have been acknowledged and exploited, it is clear that their use can be extended further to cover their antibacterial properties. In vitro evaluation showed that 20% (v/v) fatty acid extract exhibits good activity against strains of the Gram-positive bacteria Staphylococcus aureus, Enterococcus faecalis, Streptoccoccus pyogenes and Streptoccoccus pneumonia. Therefore, free polyunsaturated fatty acids from cod liver oil or other fish oils can be used as safe and natural antibacterial agents. In this study, ointment compositions containing free fatty acids as active antibacterial agents were prepared by using various natural waxes and characterized. The effects of different waxes, such as carnauba wax, ozokerite wax, laurel wax, beeswax, rice bran wax, candelilla wax and microcrystalline wax, in the concentration range of 1% to 5% (w/w) on the ointment texture, consistency and stability were evaluated. The results showed significant variations in texture, sensory and rheological profiles. This was attributed to the wax's nature and chain composition. Microcrystalline wax gave the best results but laurel wax, beeswax and rice bran wax exhibited excellent texturing, similar sensory profiles and well-balanced rheological properties. PMID:27258290

  16. Topical Formulation Comprising Fatty Acid Extract from Cod Liver Oil: Development, Evaluation and Stability Studies

    Directory of Open Access Journals (Sweden)

    Biljana Ilievska

    2016-06-01

    Full Text Available The purpose of this study was to develop a pharmaceutical formulation containing fatty acid extract rich in free omega-3 fatty acids such as eicosapentaenoic acid and docosahexaenoic acid for topical use. Although the health benefits of cod liver oil and other fish oils taken orally as a dietary supplement have been acknowledged and exploited, it is clear that their use can be extended further to cover their antibacterial properties. In vitro evaluation showed that 20% (v/v fatty acid extract exhibits good activity against strains of the Gram-positive bacteria Staphylococcus aureus, Enterococcus faecalis, Streptoccoccus pyogenes and Streptoccoccus pneumonia. Therefore, free polyunsaturated fatty acids from cod liver oil or other fish oils can be used as safe and natural antibacterial agents. In this study, ointment compositions containing free fatty acids as active antibacterial agents were prepared by using various natural waxes and characterized. The effects of different waxes, such as carnauba wax, ozokerite wax, laurel wax, beeswax, rice bran wax, candelilla wax and microcrystalline wax, in the concentration range of 1% to 5% (w/w on the ointment texture, consistency and stability were evaluated. The results showed significant variations in texture, sensory and rheological profiles. This was attributed to the wax’s nature and chain composition. Microcrystalline wax gave the best results but laurel wax, beeswax and rice bran wax exhibited excellent texturing, similar sensory profiles and well-balanced rheological properties.

  17. Topical Formulation Comprising Fatty Acid Extract from Cod Liver Oil: Development, Evaluation and Stability Studies.

    Science.gov (United States)

    Ilievska, Biljana; Loftsson, Thorsteinn; Hjalmarsdottir, Martha Asdis; Asgrimsdottir, Gudrun Marta

    2016-06-01

    The purpose of this study was to develop a pharmaceutical formulation containing fatty acid extract rich in free omega-3 fatty acids such as eicosapentaenoic acid and docosahexaenoic acid for topical use. Although the health benefits of cod liver oil and other fish oils taken orally as a dietary supplement have been acknowledged and exploited, it is clear that their use can be extended further to cover their antibacterial properties. In vitro evaluation showed that 20% (v/v) fatty acid extract exhibits good activity against strains of the Gram-positive bacteria Staphylococcus aureus, Enterococcus faecalis, Streptoccoccus pyogenes and Streptoccoccus pneumonia. Therefore, free polyunsaturated fatty acids from cod liver oil or other fish oils can be used as safe and natural antibacterial agents. In this study, ointment compositions containing free fatty acids as active antibacterial agents were prepared by using various natural waxes and characterized. The effects of different waxes, such as carnauba wax, ozokerite wax, laurel wax, beeswax, rice bran wax, candelilla wax and microcrystalline wax, in the concentration range of 1% to 5% (w/w) on the ointment texture, consistency and stability were evaluated. The results showed significant variations in texture, sensory and rheological profiles. This was attributed to the wax's nature and chain composition. Microcrystalline wax gave the best results but laurel wax, beeswax and rice bran wax exhibited excellent texturing, similar sensory profiles and well-balanced rheological properties.

  18. Transgenic poplar expressing codA exhibits enhanced growth and abiotic stress tolerance.

    Science.gov (United States)

    Ke, Qingbo; Wang, Zhi; Ji, Chang Yoon; Jeong, Jae Cheol; Lee, Haeng-Soon; Li, Hongbing; Xu, Bingcheng; Deng, Xiping; Kwak, Sang-Soo

    2016-03-01

    Glycine betaine (GB), a compatible solute, effectively stabilizes the structure and function of macromolecules and enhances abiotic stress tolerance in plants. We generated transgenic poplar plants (Populus alba × Populus glandulosa) expressing a bacterial choline oxidase (codA) gene under the control of the oxidative stress-inducible SWPA2 promoter (referred to as SC plants). Among the 13 SC plants generated, three lines (SC4, SC14 and SC21) were established based on codA transcript levels, tolerance to methyl viologen-mediated oxidative stress and Southern blot analysis. Growth was better in SC plants than in non-transgenic (NT) plants, which was related to elevated transcript levels of auxin-response genes. SC plants accumulated higher levels of GB under oxidative stress compared to the NT plants. In addition, SC plants exhibited increased tolerance to drought and salt stress, which was associated with increased efficiency of photosystem II activity. Finally, SC plants maintained lower levels of ion leakage and reactive oxygen species under cold stress compared to the NT plants. These observations suggest that SC plants might be useful for reforestation on global marginal lands, including desertification and reclaimed areas. PMID:26795732

  19. Determining COD Load of Cattle Dung and Calculating COD Formation Coefficient and Total COD Amount Engendered from Cattle Dung in China%牛粪COD负荷、产污系数及原始产污总量的测算

    Institute of Scientific and Technical Information of China (English)

    张蓓; 李汉平; 张春光

    2011-01-01

    为得到牛粪COD产污系数及原始产污总量,先采用非水样品COD负荷测定方法,对单位绝干牛粪COD负荷值进行了实验测定:牛粪(含溶解态和非溶解态的全成分样)的COD负荷实测值为1.337 kg·kg-1(绝干牛粪).由排粪系数得到牛粪的COD产污系数典型值为5.35kg·d-1·头-1.根据养牛数,计算得到我国2008年牛粪的COD原始产污总量高达2.06亿t,相当于当年全国工业和生活COD排放总量的15.6倍.需要对牛粪的GOD原始产污总量与可能形成的水环境面源贡献压力及其防范予以充分重视.%Based on the established COD (Chemical Oxygen Demand) determination method to non-aqueous samples such as crop straws, several COD load experiments on cattle dung were carried out, in which the samples of cattle dung were firstly dissolved in the solution of 75 % sulphuric acid before using the COD determination method to waste water samples. The results showed that the determination method of COD load on cattle dung was feasible in practice, and were both exact and reliable. According to the experiment, the average COD load was 1.337 kg · kg-1 ( oven dry cattle dung). The COD formation coefficient from cattle dung was 5.35 kg · d-1 · cattle -1. With the statistical data on cattle, total COD amount directly engendered from cattle dung in China was about 206 million tons in 2008, which was 15.6 times to the total COD amount discharged from all industries and urban population in 2008, China. And the COD amount formed from cattle dung in the form of non-point sources had a positive linear relationship with the lost rate of total cattle dung amount emitted into the receiving waters. Therefore, more attentions should be paid on preventing and managing water environmental issues due to the cattle dung in China.

  20. Theoretical study of the influence of twine thickness on haddock selectivity in diamond mesh cod-ends

    DEFF Research Database (Denmark)

    Herrmann, Bent; O'Neill, F.G.

    2006-01-01

    Using the cod-end simulation model PRESEMO, the influence of twine thickness on cod-end selectivity is investigated. The reduction of lateral mesh opening that arises as a result of both twine bending stiffness and the physical presence of the twine is considered. While it is shown that this leads...... to a reduction in cod-end selectivity with an increase of twine thickness, it does not fully explain the relationship found in the available experimental data.The effect twine thickness may have on the ability of a fish to deform a mesh during the early part of a haul and how netting made of thicker twine may...... discourage a fish from making escape attempts is investigated. The influence that these factors may have is examined and when included in PRESEMO the resulting simulations are a much better representation of the experimental data....

  1. Development of international fisheries for the eastern Baltic cod ( Gadus morhua ) from the late 1880s until 1938

    DEFF Research Database (Denmark)

    Eero, Margit; MacKenzie, Brian; Karlsdottir, H.M.;

    2007-01-01

    The paper provides an overview of eastern Baltic cod (Gadus morhua) fisheries from the end of the 1880s until 1938, in order to improve the knowledge of long-term stock dynamics. The data compiled and included in the study comprise catches and economic values of exploited fish species, time series...... of indicators of fishing effort and qualitative information on developments in fishing technology. This information has been assembled for different countries and locations in the Baltic Sea. We first summarize the multi-decadal development of national cod fisheries and their relative importance during...... of the variations in the catches of different countries (e.g. decline in the late 1920s; increase in the late 1930s) were caused by factors other than fishery developments. These factors probably include ecosystem-induced variations in cod population dynamics and need further investigation. (c) 2007 Elsevier B...

  2. Survival probability of Baltic larval cod in relation to spatial overlap patterns with their prey obtained from drift model studies

    DEFF Research Database (Denmark)

    Hinrichsen, H.H.; Schmidt, J.O.; Petereit, C.;

    2005-01-01

    Temporal mismatch between the occurrence of larvae and their prey potentially affects the spatial overlap and thus the contact rates between predator and prey. This might have important consequences for growth and survival. We performed a case study investigating the influence of circulation...... patterns on the overlap of Baltic cod larvae with their prey. A three-dimensional hydrodynamic model was used to analyse spatio-temporally resolved drift patterns of larval Baltic cod. A coefficient of overlap between modelled larval and idealized prey distributions indicated the probability of predator......-prey overlap, dependent on the hatching time of cod larvae. By performing model runs for the years 1979-1998 investigated the intra- and interannual variability of potential spatial overlap between predator and prey. Assuming uniform prey distributions, we generally found the overlap to have decreased since...

  3. Use of selective devices in trawls to support recovery of the Kattegat cod stock: a review of experiments and experience

    DEFF Research Database (Denmark)

    Madsen, Niels; Valentinsson, Daniel

    2010-01-01

    this provides a valuable management tool for reducing the bycatch of cod and reducing mortality, and thus helping to rebuild the depleted stock. Gear research in the area has been focused on devices that allow for continued exploitation of the Norway lobster (Nephrops norvegicus) and flatfish, but minimizing......The spawning-stock biomass of cod (Gadus morhua) in the Kattegat area is at a historically low level. Throughout the past decade considerable efforts have been devoted to research on improving both species and size selectivity of the trawls used in the mixed demersal fishery in the area, because...... measures and their effectiveness in maintaining a commercial fishery on viable stocks, yet protecting cod. We discuss the results in relation to changes in legislation and experience with implementation of new selective devices in recent years. We also discuss ways to create stronger incentives for fishers...

  4. Growth and biochemical responses of juvenile cod to acute and chronic exposure to production water from the Hibernia oil rig

    International Nuclear Information System (INIS)

    A study was conducted in which the chemical characteristics of production water collected from the Hibernia oil production platform in June, 2006 were determined. Bioassays were also performed on juvenile cod in order to determine acute responses after 48 hour exposure to concentrations of production water ranging from 0.06 to 5 per cent. Of the 70 juvenile cod that were exposed continuously for 45 days to 0.05 per cent Hibernia production water, 8 were sacrificed and liver, gill muscle and plasma was collected for biochemical analysis at day 3, 14, 28 and 45 during the exposure. Length and weight data were also collected to compare growth rates of exposed fish with unexposed fish. Results did not reveal any difference in growth rate in cod exposed for 45 days to Hibernia production water compared to those held in untreated water under the same conditions. Tissues for mixed function oxygenase (MFO) induction are undergoing analysis

  5. Influence of COD/sulfate ratios on the integrated reactor system for simultaneous removal of carbon, sulfur and nitrogen.

    Science.gov (United States)

    Yuan, Ye; Chen, Chuan; Zhao, Youkang; Wang, Aijie; Sun, Dezhi; Huang, Cong; Liang, Bin; Tan, Wenbo; Xu, Xijun; Zhou, Xu; Lee, Duu-Jung; Ren, Nanqi

    2015-01-01

    An integrated reactor system was developed for the simultaneous removal of carbon, sulfur and nitrogen from sulfate-laden wastewater and for elemental sulfur (S°) reclamation. The system mainly consisted of an expanded granular sludge bed (EGSB) for sulfate reduction and organic carbon removal (SR-CR), an EGSB for denitrifying sulfide removal (DSR), a biological aerated filter for nitrification and a sedimentation tank for sulfur reclamation. This work investigated the influence of chemical oxygen demand (COD)/sulfate ratios on the performance of the system. Influent sulfate and ammonium were fixed to the level of 600 mg SO(4)(2-) L⁻¹ and 120 mg NH(4)(+) L⁻¹, respectively. Lactate was introduced to generate COD/SO(4)(2-) = 0.5:1, 1:1, 1.5:1, 2:1, 3:1, 3.5:1 and 4:1. The experimental results indicated that sulfate could be efficiently reduced in the SR-CR unit when the COD/SO(4)(2-) ratio was between 1:1 and 3:1, and sulfate reduction was inhibited by the growth of methanogenic bacteria when the COD/SO(4)(2-) ratio was between 3.5:1 and 4:1. Meanwhile, the Org-C/S²⁻/NO(3)(-) ratios affected the S(0) reclamation efficiency in the DSR unit. When the influent COD/SO(4)(2-) ratio was between 1:1 and 3:1, appropriate Org-C/S²⁻/NO(3)(-) ratios could be achieved to obtain a maximum S° recovery in the DSR unit. For the microbial community of the SR-CR unit at different COD/SO(4)(2-) ratios, 16S rRNA gene-based high throughput Illumina MiSeq sequencing was used to analyze the diversity and potential function of the dominant species. PMID:25768217

  6. Comparison of COD removal from pharmaceutical wastewater by electrocoagulation, photoelectrocoagulation, peroxi-electrocoagulation and peroxi-photoelectrocoagulation processes

    Energy Technology Data Exchange (ETDEWEB)

    Farhadi, Sajjad, E-mail: sajjadfarhadi@ut.ac.ir [Department of Civil and Environmental Engineering, Graduate Faculty of Environment, University of Tehran (Iran, Islamic Republic of); Aminzadeh, Behnoush, E-mail: bamin@ut.ac.ir [Department of Civil and Environmental Engineering, Graduate Faculty of Environment, University of Tehran (Iran, Islamic Republic of); Torabian, Ali, E-mail: atorabi@ut.ac.ir [Department of Civil and Environmental Engineering, Graduate Faculty of Environment, University of Tehran (Iran, Islamic Republic of); Khatibikamal, Vahid, E-mail: vahidkhatibi@ut.ac.ir [Department of Civil and Environmental Engineering, Graduate Faculty of Environment, University of Tehran (Iran, Islamic Republic of); Alizadeh Fard, Mohammad, E-mail: malizadeh1987@ut.ac.ir [Department of Civil and Environmental Engineering, Graduate Faculty of Environment, University of Tehran (Iran, Islamic Republic of)

    2012-06-15

    Highlights: Black-Right-Pointing-Pointer Hydrogen peroxide improves the performance of electrocoagulation process. Black-Right-Pointing-Pointer UV light can be effective on the performance on peroxi-electrocoagulation and electrocoagulation processes. Black-Right-Pointing-Pointer The optimal amount of hydrogen peroxide for peroxi-electrocoagulation process for COD removal from pharmaceutical wastewater is 300 mg/L. Black-Right-Pointing-Pointer The optimal values of pH for electrocoagulation and peroxi-electrocoagulation are 7 and 3, respectively. - Abstract: This work makes a comparison between electrocoagulation (EC), photoelectrocoagulation, peroxi-electrocoagulation and peroxi-photoelectrocoagulation processes to investigate the removal of chemical oxygen demand (COD) from pharmaceutical wastewater. The effects of operational parameters such as initial pH, current density, applied voltage, amount of hydrogen peroxide and electrolysis time on COD removal efficiency were investigated and the optimum operating range for each of these operating variables was experimentally determined. In electrocoagulation process, the optimum values of pH and voltage were determined to be 7 and 40 V, respectively. Desired pH and hydrogen peroxide concentration in the Fenton-based processes were found to be 3 and 300 mg/L, respectively. The amounts of COD, pH, electrical conductivity, temperature and total dissolved solids (TDS) were on-line monitored. Results indicated that under the optimum operating range for each process, the COD removal efficiency was in order of peroxi-electrocoagulation > peroxi-photoelectrocoagulation > photoelectrocoagulation > electrocoagulation. Finally, a kinetic study was carried out using the linear pseudo-second-order model and results showed that the pseudo-second-order equation provided the best correlation for the COD removal rate.

  7. Evaluation of feed COD/sulfate ratio as a control criterion for the biological hydrogen sulfide production and lead precipitation

    Energy Technology Data Exchange (ETDEWEB)

    Velasco, Antonio [Direccion General del Centro Nacional de Investigacion y Capacitacion Ambiental-Instituto Nacional de Ecologia, Av. San Rafael Atlixco 186, Col. Vicentina. Iztapalapa, Mexico 09340, D.F. (Mexico)], E-mail: jvelasco@ine.gob.mx; Ramirez, Martha [Direccion General del Centro Nacional de Investigacion y Capacitacion Ambiental-Instituto Nacional de Ecologia, Av. San Rafael Atlixco 186, Col. Vicentina. Iztapalapa, Mexico 09340, D.F. (Mexico); Volke-Sepulveda, Tania [Departamento de Biotecnologia, UAM-Cuajimalpa, San Rafael Atlixco 186, Col. Vicentina. Iztapalapa, Mexico 09340, D.F. (Mexico); Gonzalez-Sanchez, Armando [Departamento de Ingenieria de Procesos, Universidad Autonoma Metropolitana-Iztapalapa, UAM-Cuajimalpa, San Rafael Atlixco 186, Col. Vicentina. Iztapalapa, Mexico 09340, D.F. (Mexico); Revah, Sergio [Departamento de Procesos y Tecnologia, UAM-Cuajimalpa, San Rafael Atlixco 186, Col. Vicentina. Iztapalapa, Mexico 09340, D.F. (Mexico)

    2008-03-01

    The ability of sulfate-reducing bacteria to produce hydrogen sulfide and the high affinity of sulfide to react with divalent metallic cations represent an excellent option to remove heavy metals from wastewater. Different parameters have been proposed to control the hydrogen sulfide production by anaerobic bacteria, such as the organic and sulfate loading rates and the feed COD/SO{sub 4}{sup 2-} ratio. This work relates the feed COD/SO{sub 4}{sup 2-} ratio with the hydrogen sulfide production and dissolved lead precipitation, using ethanol as carbon and energy source in an up-flow anaerobic sludge blanket reactor. A maximum dissolved sulfide concentration of 470 {+-} 7 mg S/L was obtained at a feed COD/SO{sub 4}{sup 2-} ratio of 2.5, with sulfate and ethanol conversions of approximately 94 and 87%, respectively. The lowest dissolved sulfide concentration (145 {+-} 10 mg S/L) was observed with a feed COD/SO{sub 4}{sup 2-} ratio of 0.67. Substantial amounts of acetate (510-1730 mg/L) were produced and accumulated in the bioreactor from ethanol oxidation. Although only incomplete oxidation of ethanol to acetate was observed, the consortium was able to remove 99% of the dissolved lead (200 mg/L) with a feed COD/SO{sub 4}{sup 2-} ratio of 1.5. It was found that the feed COD/SO{sub 4}{sup 2-} ratio could be an adequate parameter to control the hydrogen sulfide production and the consequent precipitation of dissolved lead.

  8. Lipid and Fatty Acid Compositions of Cod(Gadus morhua),Haddock(Melanogrammus aeglefinus)and Halibut(Hippogiossus hippoglossus)

    Institute of Scientific and Technical Information of China (English)

    ZENG Duan; MAI Kangsen; AI Qinghui; Joyce E.Milley; Santosh P.Lall

    2010-01-01

    This study was conducted to compare lipid and fatty acid composition of cod,haddock and halibut.Three groups of cod(276 g±61 g),haddock(538 g±83 g)and halibut(3704 g±221 g)were maintained with commercial feeds mainly based on fish meal and marine fish oil for 12 weeks prior to sampling.The fatty acid compositions of muscle and liver were determined by GC/FID after derivatization of extracted lipids into fatty acid methyl esters(FAME).Lipids were also fractionated into neutral and polar lipids using Waters silica Sep-Pak(R).The phospholipid fraction was further separated by high-performance thin-layer chromatography(HPTLC)and the FAME profile was obtained.Results of the present study showed that cod and haddock were lean fish and their total muscle lipid contents were 0.8% and 0.7%,respectively,with phospholipid constituting 83.6% and 87.5% of the total muscle lipid,respectively.Halibut was a medium-fat fish and its muscle lipid content was 8%,with 84% of the total muscle lipid being neutral lipid.Total liver lipid contents of cod,haddock and halibut were 36.9%,67.2% and 30.7%,respectively,of which the neutral lipids accounted for the major fraction(88.1%-97.1%).Polyunsaturated fatty acids were the most abundant in cod and haddock muscle neutral lipid.Monounsaturated fatty acid level was the highest in halibut muscle neutral lipid.Fatty acid compositions of phospholipid were relatively constant.In summary,the liver of cod and haddock as lean fish was the main lipid reserve organ,and structural phospholipid is the major lipid form in flesh.However,as a medium-fat fish,halibut stored lipid in both their liver and muscle.

  9. Cloning and functional verification of codY promoter from Streptococcus thermophilus%嗜热链球菌codY基因启动子的克隆及功能验证

    Institute of Scientific and Technical Information of China (English)

    刘芳; 都立辉; 王道营; 徐为民; 霍贵成

    2013-01-01

    The experiment aimed to study the function of codY gene promoter. The promoter was amplified from Streptococcus thermophilus KLDS 3.0503 genome and inserted into the promoter probe vector pNZ273 to construct a recom-binant plasmid named pNZ273/codY. The plasmid p3. 8501-1 in KLDS3. 8501 was sequenced and its genetic information was analyzed. The replicated fragment of plasmid p3. 8501-1 was ligated together with the fragments including chloramphen-icol-resistance gene, codY gene promoter and gusA gene in plasmid pNZ273/codY.The ligated product was electrotrans-formed into KLDS3.0503 to construct a recombinant plasmid named pSTl. It was found that both in Lactococcus lactis and Streptococcus thermophilus, the codY gene promoter could switch on the gusA gene expression, and p-glucuronidase activity could be detected only when the strains grew to the logarithmic growth phase. These results indicated that the codY gene promoter could functioned as an inducible promoter because of its self-regulation mechanism.%为研究转录调控蛋白codY基因启动子的功能,首先从嗜热链球菌KLDS3.0503中克隆出codY基因启动子,将该启动子连入启动子探针型载体pNZ273的gusA基因上游,获得重组质粒pNZ273/codY.通过分析嗜热链球菌KLDS3.8501携带的质粒p3.8501-1的全序列后,将p3.8501-1质粒的复制区段与pNZ273/codY质粒中氯霉素抗性基因、codY基因启动子和gusA基因的片断连接到一起,电转化入嗜热链球菌KLDS3.0503中,获得重组质粒pST1.在乳酸乳球菌和嗜热链球菌中,该启动子均能启动下游gusA基因的表达,并且当菌株生长到对数生长期时,才检测到β-葡糖苷酸酶的活性.这说明codY启动子凭借自身的调控机制可以起到诱导型启动子的作用,并能控制外源基因的表达.

  10. Temperature fluctuations in the Atlantic Ocean

    International Nuclear Information System (INIS)

    The article discusses the temperature fluctuations in connection with drought in Africa, the climate in North America, the European heat waves and the frequent tropical hurricanes in the Atlantic Ocean. Problems with climate modelling and some pollution aspects are mentioned

  11. Atlantic Marine Mammal Assessment Vessel Surveys

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — These data sets are a compilation of large vessel surveys for marine mammal stock assessments in South Atlantic (Florida to Maryland) waters from 1994 to the...

  12. Atlantic energy and the strategic outlook

    Directory of Open Access Journals (Sweden)

    Paul Isbell

    2013-09-01

    Full Text Available Sweeping changes are beginning to transform energy scenarios around the world. The gas revolution, a renaissance in petroleum technology and exploration, and a chaotic but powerful movement toward the goal of low-carbon economies are three of the principal energy trends currently interacting with structural changes in the geo-economics of the Atlantic world to present new perspectives and opportunitiesfor the diverse actors in the ‘Atlantic Basin’. This article explores how changes in the energy landscape are contributing to a reassessment of the strategic horizon. The potential impacts of the shale revolution, deep-offshore oil, biofuels and other modern renewable energies on the geopolitics of the Atlantic Basin will be assessed, and the hypothesis that an Atlantic Basin energy system is now taking shape will be evaluated, along with an analysis of anticipated impacts.

  13. Northwest Atlantic Regional Climatology (NCEI Accession 0155889)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — To provide an improved oceanographic foundation and reference for multi-disciplinary studies of the Northwest Atlantic Ocean, NCEI Regional Climatology Team...

  14. Ocean science: Vagaries of Atlantic overturning

    Science.gov (United States)

    Haine, Thomas W. N.

    2016-07-01

    A weakening of the Atlantic meridional overturning circulation has emerged from noise after years of painstaking measurements. Three independent lines of evidence suggest that an anthropogenic influence on this overturning is not yet detectable.

  15. Atlantic NAD 83 Continental Shelf Boundary (CSB)

    Data.gov (United States)

    Bureau of Ocean Energy Management, Department of the Interior — This data set contains Continental Shelf Boundary (CSB) lines in ESRI shapefile format for the BOEM Atlantic Region. The CSB defines the seaward limit of federally...

  16. Atlantic NAD 83 SLA Baseline Tangents

    Data.gov (United States)

    Bureau of Ocean Energy Management, Department of the Interior — This data set contains baseline tangent lines in ArcGIS shapefile format for the BOEM Atlantic Region. Baseline tangent lines are typically bay or river closing...

  17. Atlantic NAD 83 SLA Baseline Points

    Data.gov (United States)

    Bureau of Ocean Energy Management, Department of the Interior — This data set contains baseline points in ArcGIS shapefile format for the BOEM Atlantic Region. Baseline points are the discrete coordinate points along the...

  18. Atlantic Sharpnose Shark Reproductive Biology Data

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Reproductive data from Atlantic sharpnose sharks were collected from specimens captured throughout the northern Gulf of Mexico on various research vessels. Data...

  19. North Atlantic Coastal Plain aquifer system

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This data set represents the extent of the North Atlantic Coastal Plain aquifer system in North Carolina, Virginia, Maryland, Deleware, and New Jersey.

  20. Atlantic Surfclam and Ocean Quahog Survey

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The standardized NEFSC Atlantic Surfclam and Ocean Quahog Survey has covered an area from Cape Hatteras to Georges Bank. The survey was conducted every two or three...