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Sample records for atlantic cod piscidin

  1. Ubiquitous presence of piscidin-1 in Atlantic cod as evidenced by immunolocalisation

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    Ruangsri Jareeporn

    2012-07-01

    Full Text Available Abstract Background Antimicrobial peptides (AMPs, the natural antibiotics bestowed upon all forms of life, consist of small molecular weight proteins with a broad spectrum antimicrobial activity against a variety of pathogenic microorganisms. Piscidins are one of the AMP families that are imperative for the innate defence mechanisms of teleosts. Atlantic cod, a basal fish belonging to the superorder Paracanthopterygii also possesses multiple piscidin peptides. Two piscidin paralogues (pis1 and pis2 and a novel alternative splice variant of pis2 of this fish were previously described by us. To shed light on other potent roles of these molecules, now we have mapped the distribution of piscidin 1 (Pis1, in different tissues and organs of cod through immunohistochemistry (IHC employing an affinity purified polyclonal antibody specific to Pis1. Results Various cell types and tissues of Atlantic cod including those from the immune organs of naïve fish are armed with Pis1 peptide. Different types of the blood leucocytes and phagocytic cells among the leucocytes examined gave a relatively strong indication of Pis1 immunopositivity. In addition, other cell types such as hematopoietic cells, epithelial cells and multi-granular cells located in the mucosal and hematopoietic tissues were also Pis1-immunoreactive. More interestingly, chondrocytes appear to produce Pis1 and this is the first report on the presence of an AMP in cartilage tissue of fish. Furthermore, Pis1 immunopositivity was detected in other tissues and organs of naïve fish including neural tissues, exocrine and endocrine glands, compound gland cells, excretory kidney, intestinal and respiratory epithelial cells, swim bladder, skin and hypodermis layer, myosepta, liver, heart, eye and oocytes. Conclusions Pis1 peptide is produced by various cell types located in different tissues and organs of Atlantic cod. It is present in all immune-related organs of naïve fish and the elevated peptide

  2. Occurrence of anisakid nematodes in Atlantic cod (Gadus morhua) and Greenland cod (Gadus ogac), West Greenland

    DEFF Research Database (Denmark)

    Mouritsen, Kim N.; Hedeholm, Rasmus; Schack, Henriette B.;

    2010-01-01

    Anisakid nematodes commonly infect gadids, and are of economic and aesthetic importance to the commercial fishing industry in Greenland as some species are pathogenic to humans. However, very little is known about the occurrence of these parasites and their impact on the hosts in Greenland waters....... During a survey in 2005, stomach sample of 227 Atlantic cod (Gadus morhua) and 64 Greenland cod (Gadus ogac) was collected in Godthaab and Sisimiut fiord systems in West Greenland waters. All cod were dissected for stomach contents and anisakid nematodes were removed from the visceral cavity. Third stage...... nematode species regarding prevalence of infection and mean infection intensity was evident, and there was no relationship between fish condition and the intensity of nematode infections. Standardised for size, capelin-eating cod were in better condition and more heavily infected than fish subsisting...

  3. Potential Use of Atlantic Cod Trypsin in Biomedicine

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    Ágústa Gudmundsdóttir

    2013-01-01

    Full Text Available Surface proteins of viruses and bacteria used for cell attachment and invasion are candidates for degradation by proteases. Trypsin from Atlantic cod (Gadus morhua was previously demonstrated to have efficacy against influenza viruses in vitro and on skin. In this paper, cod trypsin is shown to be 3–12 times more effective in degrading large native proteins than its mesophilic analogue, bovine trypsin. This is in agreement with previous findings where cod trypsin was found to be the most active among twelve different proteases in cleaving various cytokines and pathological proteins. Furthermore, our results show that cod trypsin has high efficacy against herpes simplex virus type 1 (HSV-1 and the respiratory syncytial virus (RSV in vitro. The results on the antipathogenic properties of cod trypsin are important because rhinovirus, RSV, and influenza are the most predominant pathogenic viruses in upper respiratory tract infections. Results from a clinical study presented in this paper show that a specific formulation containing cod trypsin was preferred for wound healing over other methods used in the study. Apparently, the high digestive ability of the cold-adapted cod trypsin towards large native proteins plays a role in its efficacy against pathogens and its positive effects on wounds.

  4. Structure of chymotrypsin variant B from Atlantic cod, Gadus morhua

    DEFF Research Database (Denmark)

    Leth-Larsen, Rikke; Asgeirsson, B; Thórólfsson, M

    1996-01-01

    The amino-acid sequence of chymotrypsin variant B isolated from the pyloric caeca of Atlantic cod has been elucidated. The characterization of the primary structure is based on N-terminal Edman degradation and mass spectrometry of the native protein and enzymatically derived peptides. Chymotrypsin...... side-chains may contribute to the maintenance of flexibility at low temperatures. Several amino-acid sequence differences adjacent to the catalytic site are observed in the two cod chymotrypsin variants which also differ in kinetic properties. Unlike the mammalian chymotrypsins, which contain several...

  5. Excess post hypoxic oxygen consumption in Atlantic cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Plambech, M.; Deurs, Mikael van; Steffensen, J.F.;

    2013-01-01

    Atlantic cod Gadus morhua experienced oxygen deficit (DO2 ) when exposed to oxygen levels below their critical level (c. 73% of pcrit) and subsequent excess post-hypoxic oxygen consumption (CEPHO) upon return to normoxic conditions, indicative of an oxygen debt. The mean±s.e. CEPHO:DO2 was 6·9±1·......·9±1·5, suggesting that resorting to anaerobic energy production in severe hypoxia is energetically expensive...

  6. Iodine nutrition and toxicity in Atlantic cod (Gadus morhua larvae

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    S Penglase

    2013-02-01

    Full Text Available Copepods as feed promote better growth and development in marine fish larvae than rotifers. However, unlike rotifers, copepods contain several minerals such as iodine (I, at potentially toxic levels. Iodine is an essential trace element and both under and over supply of I can inhibit the production of the I containing thyroid hormones. It is unknown whether marine fish larvae require copepod levels of I or if mechanisms are present that prevent I toxicity. In this study, larval Atlantic cod (Gadus morhua were fed rotifers enriched to intermediate (26 mg I kg-1 dry weight; MI group or copepod (129 mg I kg-1 DW; HI group I levels and compared to cod larvae fed control rotifers (0.6 mg I kg-1 DW. Larval I concentrations were increased by 3 (MI and 7 (HI fold compared to controls during the rotifer feeding period. No differences in growth were observed, but the HI diet increased thyroid follicle colloid to epithelium ratios, and affected the essential element concentrations of larvae compared to the other groups. The thyroid follicle morphology in the HI larvae is typical of colloid goitre, a condition resulting from excessive I intake, even though whole body I levels were below those found previously in copepod fed cod larvae. This is the first observation of dietary induced I toxicity in fish, and suggests I toxicity may be determined to a greater extent by bioavailability and nutrient interactions than by total body I concentrations in fish larvae. Rotifers with 0.6 mg I kg-1 DW appeared sufficient to prevent gross signs of I deficiency in cod larvae reared with continuous water exchange, while modelling of cod larvae versus rotifer I levels suggests that optimum I levels in rotifers for cod larvae is 3.5 mg I kg-1 DW.

  7. Exophiala angulospora causes systemic inflammation in atlantic cod Gadus morhua.

    Science.gov (United States)

    Gjessing, Mona Cecilie; Davey, Marie; Kvellestad, Agnar; Vrålstad, Trude

    2011-10-06

    Species of Exophiala are opportunistic fungal pathogens that may infect a broad range of warm- and cold-blooded animals, including salmonids and Atlantic cod. In the present study, we observed abnormal swimming behaviour and skin pigmentation and increased mortality in cod kept in an indoor tank. Necropsy revealed foci of different sizes with a greyish to brownish colour in internal organs of diseased fish. The foci consisted of ramifying darkly pigmented fungal hyphae surrounded by distinct layers of inflammatory cells, including macrophage-like cells. In the inner layer with many hyphae, the macrophage-like cells were dead. We observed no apparent restriction of fungal growth by the inflammatory response. A darkly pigmented fungus was repeatedly isolated in pure culture from foci of diseased fish and identified as Exophiala angulospora using morphological and molecular characters. This species has not been previously reported to cause disease in cod, but has been reported as an opportunistic pathogen of both marine and freshwater fish. Based on the morphology and sequence analysis presented here, we conclude that E. angulospora caused the observed chronic multifocal inflammation in internal organs of cod, leading to severe disease and mortality.

  8. Atlantic cod (Gadus morhua hemoglobin genes: multiplicity and polymorphism

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    Gamperl A Kurt

    2009-09-01

    Full Text Available Abstract Background Hemoglobin (Hb polymorphism, assessed by protein gel electrophoresis, has been used almost exclusively to characterize the genetic structure of Atlantic cod (Gadus morhua populations and to establish correlations with phenotypic traits such as Hb oxygen binding capacity, temperature tolerance and growth characteristics. The genetic system used to explain the results of gel electrophoresis entails the presence of one polymorphic locus with two major alleles (HbI-1; HbI-2. However, vertebrates have more than one gene encoding Hbs and recent studies have reported that more than one Hb gene is present in Atlantic cod. These observations prompted us to re-evaluate the number of Hb genes expressed in Atlantic cod, and to perform an in depth search for polymorphisms that might produce relevant phenotypes for breeding programs. Results Analysis of Expressed Sequence Tags (ESTs led to the identification of nine distinct Hb transcripts; four corresponding to the α Hb gene family and five to the β Hb gene family. To gain insights about the Hb genes encoding these transcripts, genomic sequence data was generated from heterozygous (HbI-1/2 parents and fifteen progeny; five of each HbI type, i.e., HbI-1/1, HbI-1/2 and HbI-2/2. β Hb genes displayed more polymorphism than α Hb genes. Two major allele types (β1A and β1B that differ by two linked non-synonymous substitutions (Met55Val and Lys62Ala were found in the β1 Hb gene, and the distribution of these β1A and β1B alleles among individuals was congruent with that of the HbI-1 and HbI-2 alleles determined by protein gel electrophoresis. RT-PCR and Q-PCR analysis of the nine Hb genes indicates that all genes are expressed in adult fish, but their level of expression varies greatly; higher expression of almost all Hb genes was found in individuals displaying the HbI-2/2 electrophoretic type. Conclusion This study indicates that more Hb genes are present and expressed in adult

  9. Atlantic Cod (Gadus morhua benefits from the availability of seagrass (Zostera marina nursery habitat

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    Richard J. Lilley

    2014-12-01

    Full Text Available The Atlantic cod (Gadus morhua is a species of significant economic and historic importance but infamous for its decline. Apart from overfishing, the causes of this decline and its subsequent lack of recovery remain largely unresolved. Indeed, the degree to which specific habitats are important for this species remains unquantified at the scale of North Atlantic. Here, the literature on the role of eelgrass meadows (Zostera marina as valuable nursery habitat for the Atlantic cod is reviewed and synthesized. Evidence is presented on relative densities of Atlantic cod in shallow water environments and in eelgrass meadows in comparison to alternative habitats. In addition, evidence pertaining to the ’viability gains’ attributed to the use of eelgrass meadows as nursery habitat (growth and survival by juvenile Atlantic cod is analyzed. Although juvenile Atlantic cod use of Z. marina is found to be facultative, when possible, available literatures indicates that they may select Z. marina as a nursery habitat where they are found in high density (average of at least 246 ha−1. From their use of Z. marina habitat the juvenile Atlantic cod receives viability benefits from it, improving their chances of reaching maturation. This paper provides strong evidence that eelgrass meadows are of significant importance to contributing to Atlantic cod stocks.

  10. A genomic island linked to ecotype divergence in Atlantic cod

    DEFF Research Database (Denmark)

    Hansen, Jakob Hemmer; Eg Nielsen, Einar; Therkildsen, Nina O.;

    2013-01-01

    gene flow and large effective population sizes, properties which theoretically could restrict divergence in local genomic regions. We identify a genomic region of strong population differentiation, extending over approximately 20 cM, between pairs of migratory and stationary ecotypes examined at two......The genomic architecture underlying ecological divergence and ecological speciation with gene flow is still largely unknown for most organisms. One central question is whether divergence is genome‐wide or localized in ‘genomic mosaics’ during early stages when gene flow is still pronounced....... Empirical work has so far been limited, and the relative impacts of gene flow and natural selection on genomic patterns have not been fully explored. Here, we use ecotypes of Atlantic cod to investigate genomic patterns of diversity and population differentiation in a natural system characterized by high...

  11. Proteome reference map of the skin mucus of Atlantic cod (Gadus morhua) revealing immune competent molecules

    NARCIS (Netherlands)

    Rajan, B.; Fernandes, J.M.O.; Caipang, C.M.A.; Kiron, V.; Rombout, J.H.W.M.; Brinchmann, M.

    2011-01-01

    The skin mucosal proteome of Atlantic cod (Gadus morhua) was mapped using a 2D PAGE, LC–MS/MS coupled approach. Mucosal proteins from naive fish were identified primarily by similarity searches across various cod EST databases. The identified proteins were clustered into 8 groups based on gene ontol

  12. Evaluation of Electrical Stunning of Atlantic Cod (Gadus morhua) and Turbot (Psetta maxima) in Seawater

    NARCIS (Netherlands)

    Lambooij, E.; Digre, H.; Erikson, U.; Reimert, H.G.M.; Burggraaf, D.; Vis, van de J.W.

    2013-01-01

    The aim of this study was to assess electrical stunning of Atlantic cod and turbot in seawater to develop a protocol for the process of stunning and killing. An induced general epileptiform insult (unconscious) had a duration of 40 ± 27 s (n =14) in cod (2.6 ± 0.5 kg) and 34 ± 18 s (n = 19) in turbo

  13. Characterization of Atlantic Cod Spawning Habitat and Behavior in Icelandic Coastal Waters

    OpenAIRE

    Timothy B Grabowski; Kevin M Boswell; McAdam, Bruce J.; R J David Wells; Guđrún Marteinsdóttir

    2012-01-01

    The physical habitat used during spawning may potentially be an important factor affecting reproductive output of broadcast spawning marine fishes, particularly for species with complex, substrate-oriented mating systems and behaviors, such as Atlantic cod Gadus morhua. We characterized the habitat use and behavior of spawning Atlantic cod at two locations off the coast of southwestern Iceland during a 2-d research cruise (15-16 April 2009). We simultaneously operated two different active hyd...

  14. Transferrin gene polymorphisms and population genetic studies of Atlantic cod (Gadus morhua)

    Institute of Scientific and Technical Information of China (English)

    Berhan Asmamaw

    2016-01-01

    Objective:To detect single nucleotide polymorphisms (SNPs) in the cod transferrin gene by comparing the sequences from Norwegian (North East Atlantic Ocean) and Canadian (North West Atlantic Ocean) specimen, and to quantify the genetic variation and differentiation in East and West Atlantic cod populations. Methods:cDNA sequences between individuals of Canadian (North West Atlantic Ocean) and Norwegian (North East Atlantic Ocean) origin were aligned. Allele frequencies of theSNPs were used to discriminate the different Atlantic cod populations in West/East Atlantic Ocean, and the Baltic Sea. Results: The sequence alignment detected19SNPs, of which 18 of them resulted in amino acid changes in the transferrin protein. Nonsynonymous to synonymous site substitution ratio (dn/ds) was by far greater than 1 providing an evidence for the existence of positive selection. The West Atlantic cod populations showed high values of heterozygosity and the Baltic populations were found to be inbred. Conclusions: This study identified and indicated transferrin gene polymorphisms that can be used for population differentiations.

  15. Differences in salinity tolerance and gene expression between two populations of Atlantic cod (Gadus morhua) in response to salinity stress

    DEFF Research Database (Denmark)

    Larsen, Peter Foged; Eg Nielsen, Einar; Meier, Kristian

    2012-01-01

    in salinity tolerance and gene expression among Atlantic cod (Gadus morhua) from two populations distributed across a steep salinity gradient, we observed high mortality (45% North Sea cod and 80% Baltic Sea cod) in a reciprocal common garden setup. Quantitative RT-PCR assays for expression of hsp70 and Na....... The findings strongly suggest that Atlantic cod are adapted to local saline conditions, despite relatively low levels of neutral genetic divergence between populations...

  16. Thermal niche of Atlantic cod Gadus morhua: limits, tolerance and optima

    DEFF Research Database (Denmark)

    Righton, David A.; Andersen, Ken Haste; Neat, Francis;

    2010-01-01

    , but this remains speculative because almost no information is available on the thermal tolerance of cod in its natural environment. We used electronic tags to measure the thermal experience of 384 adult Atlantic cod from 8 different stocks in the northeast Atlantic. Over 100000 d of data were collected in total....... The data demonstrate that cod is an adaptable and tolerant species capable of surviving and growing in a wide range of temperate marine climates. The total thermal niche ranged from –1.5 to 19°C; this range was narrower (1 to 8°C) during the spawning season. Cod in each of the stocks studied had a thermal...... in those cod with a mean thermal history of between 8 and 10°C. Our direct observations of habitat occupation suggest that adult cod will be able to tolerate warming seas, but that climate change will affect cod populations at earlier life-history stages as well as exerting effects on cod prey species....

  17. Identification and characterisation of novel SNP markers in Atlantic cod: Evidence for directional selection

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    Fjalestad Kjersti T

    2008-02-01

    Full Text Available Abstract Background The Atlantic cod (Gadus morhua is a groundfish of great economic value in fisheries and an emerging species in aquaculture. Genetic markers are needed to identify wild stocks in order to ensure sustainable management, and for marker-assisted selection and pedigree determination in aquaculture. Here, we report on the development and evaluation of a large number of Single Nucleotide Polymorphism (SNP markers from the alignment of Expressed Sequence Tag (EST sequences in Atlantic cod. We also present basic population parameters of the SNPs in samples of North-East Arctic cod and Norwegian coastal cod obtained from three different localities, and test for SNPs that may have been targeted by natural selection. Results A total of 17,056 EST sequences were used to find 724 putative SNPs, from which 318 segregating SNPs were isolated. The SNPs were tested on Atlantic cod from four different sites, comprising both North-East Arctic cod (NEAC and Norwegian coastal cod (NCC. The average heterozygosity of the SNPs was 0.25 and the average minor allele frequency was 0.18. FST values were highly variable, with the majority of SNPs displaying very little differentiation while others had FST values as high as 0.83. The FST values of 29 SNPs were found to be larger than expected under a strictly neutral model, suggesting that these loci are, or have been, influenced by natural selection. For the majority of these outlier SNPs, allele frequencies in a northern sample of NCC were intermediate between allele frequencies in a southern sample of NCC and a sample of NEAC, indicating a cline in allele frequencies similar to that found at the Pantophysin I locus. Conclusion The SNP markers presented here are powerful tools for future genetics work related to management and aquaculture. In particular, some SNPs exhibiting high levels of population divergence have potential to significantly enhance studies on the population structure of Atlantic cod.

  18. Automatic feeding and Harvesting of Juvenile Atlantic Cod (Gadus Morhua L. in a Pond

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    V. Øiestad

    1987-01-01

    Full Text Available Large scale production of juvenile Atlantic cod has been carried out since 1980 in a saltwater pond. A break-through was obtained in 1983 with high survival rates of cod larvae to metamorphosis. In 1985 we made progress in two fiels, reduced cannibalism and automatic harvesting. Juvenile cod formed large schools while fed dry pellets in the currents set up by five propellers. An underwater loudspeaker was programmed to give sound pulses just before feeding. During harvesting dry pellets were released inside a fish trap while giving the sound signals the cod juveniles were conditioned to. The cod readily entered the trap and a computer-controlled fish pump transported the fish from the fish trap into a storing tank and grading grids. The trap gradually emptied the pond of fish and more than 80

  19. Elucidation of different cold-adapted Atlantic cod (Gadus morhua) trypsin X isoenzymes.

    Science.gov (United States)

    Stefansson, Bjarki; Sandholt, Gunnar B; Gudmundsdottir, Ágústa

    2017-01-01

    Trypsins from Atlantic cod (Gadus morhua), consisting of several isoenzymes, are highly active cold-adapted serine proteases. These trypsins are isolated for biomedical use in an eco-friendly manner from underutilized seafood by-products. Our group has explored the biochemical properties of trypsins and their high potential in biomedicine. For broader utilization of cod trypsins, further characterization of biochemical properties of the individual cod trypsin isoenzymes is of importance. For that purpose, a benzamidine purified trypsin isolate from Atlantic cod was analyzed. Anion exchange chromatography revealed eight peaks containing proteins around 24kDa with tryptic activity. Based on mass spectrometric analysis, one isoenzyme gave the best match to cod trypsin I and six isoenzymes gave the best match to cod trypsin X. Amino terminal sequencing of two of these six trypsin isoenzymes showed identity to cod trypsin X. Three sequence variants of trypsin X were identified by cDNA analysis demonstrating that various forms of this enzyme exist. One trypsin X isoenzyme was selected for further characterization based on abundance and stability. Stepwise increase in catalytic efficiency (kcat/Km) of this trypsin X isoenzyme was obtained with substrates containing one to three amino acid residues. The study demonstrates that the catalytic efficiency of this trypsin X isoenzyme is comparable to that of cod trypsin I, the most abundant and highly active isoenzyme in the benzamidine cod trypsin isolate. Differences in pH stability and sensitivity to inhibitors of the trypsin X isoenzyme compared to cod trypsin I were detected that may be important for practical use.

  20. Differential expression of immune and stress genes in the skin of Atlantic cod (Gadus morhua)

    NARCIS (Netherlands)

    Caipang, C.M.A.; Lazado, C.C.; Brinchmann, M.; Rombout, J.H.W.M.; Kiron, V.

    2011-01-01

    The present study describes the transcriptional profiles of selected immune and stress genes with putative important roles in the cutaneous immune defense of Atlantic cod (Gadus morhua). In addition it shows differential expression of many genes at the dorsal and ventral sides of fish, in general ha

  1. The effect of external dummy transmitters on oxygen consumption and performance of swimming Atlantic cod

    DEFF Research Database (Denmark)

    Steinhausen, M.F.; Andersen, Niels Gerner; Steffensen, J.F.

    2006-01-01

    Decreased critical swimming speed and increased oxygen consumption (Mo-2) was found for externally tagged Atlantic cod Gadus morhua swimming at a high speed of 0 center dot 9 body length (total length, L-Gamma) s(-1). No difference was found in the standard metabolic rate, indicating...

  2. Atlantic Cod Show a Highly Variable Sensitivity to Electric-Induced Spinal Injuries

    NARCIS (Netherlands)

    Soetaert, M.; Haan, de D.; Verschueren, B.; Decostere, A.; Puvanendran, V.; Saunders, J.; Polet, H.; Chiers, K.

    2016-01-01

    Pulse trawling is the most promising alternative to conventional beam trawls targeting Sole Solea solea (also known as Solea vulgaris), but due to the electric fields created by electrotrawls spinal injuries are reported in gadoid round fishes such as Atlantic Cod Gadus morhua. This study aimed t

  3. Characterization of Atlantic cod spawning habitat and behavior in Icelandic coastal waters.

    Directory of Open Access Journals (Sweden)

    Timothy B Grabowski

    Full Text Available The physical habitat used during spawning may potentially be an important factor affecting reproductive output of broadcast spawning marine fishes, particularly for species with complex, substrate-oriented mating systems and behaviors, such as Atlantic cod Gadus morhua. We characterized the habitat use and behavior of spawning Atlantic cod at two locations off the coast of southwestern Iceland during a 2-d research cruise (15-16 April 2009. We simultaneously operated two different active hydroacoustic gear types, a split beam echosounder and a dual frequency imaging sonar (DIDSON, as well as a remotely operated underwater vehicle (ROV. A total of five fish species were identified through ROV surveys: including cusk Brosme brosme, Atlantic cod, haddock Melanogrammus aeglefinus, lemon sole Microstomus kitt, and Atlantic redfish Sebastes spp. Of the three habitats identified in the acoustic surveys, the transitional habitat between boulder/lava field and sand habitats was characterized by greater fish density and acoustic target strength compared to that of sand or boulder/lava field habitats independently. Atlantic cod were observed behaving in a manner consistent with published descriptions of spawning. Individuals were observed ascending 1-5 m into the water column from the bottom at an average vertical swimming speed of 0.20-0.25 m s(-1 and maintained an average spacing of 1.0-1.4 m between individuals. Our results suggest that cod do not choose spawning locations indiscriminately despite the fact that it is a broadcast spawning fish with planktonic eggs that are released well above the seafloor.

  4. Characterization of Atlantic cod spawning habitat and behavior in Icelandic coastal waters.

    Science.gov (United States)

    Grabowski, Timothy B; Boswell, Kevin M; McAdam, Bruce J; Wells, R J David; Marteinsdóttir, Guđrún

    2012-01-01

    The physical habitat used during spawning may potentially be an important factor affecting reproductive output of broadcast spawning marine fishes, particularly for species with complex, substrate-oriented mating systems and behaviors, such as Atlantic cod Gadus morhua. We characterized the habitat use and behavior of spawning Atlantic cod at two locations off the coast of southwestern Iceland during a 2-d research cruise (15-16 April 2009). We simultaneously operated two different active hydroacoustic gear types, a split beam echosounder and a dual frequency imaging sonar (DIDSON), as well as a remotely operated underwater vehicle (ROV). A total of five fish species were identified through ROV surveys: including cusk Brosme brosme, Atlantic cod, haddock Melanogrammus aeglefinus, lemon sole Microstomus kitt, and Atlantic redfish Sebastes spp. Of the three habitats identified in the acoustic surveys, the transitional habitat between boulder/lava field and sand habitats was characterized by greater fish density and acoustic target strength compared to that of sand or boulder/lava field habitats independently. Atlantic cod were observed behaving in a manner consistent with published descriptions of spawning. Individuals were observed ascending 1-5 m into the water column from the bottom at an average vertical swimming speed of 0.20-0.25 m s(-1) and maintained an average spacing of 1.0-1.4 m between individuals. Our results suggest that cod do not choose spawning locations indiscriminately despite the fact that it is a broadcast spawning fish with planktonic eggs that are released well above the seafloor.

  5. Daily rhythmicity of clock gene transcripts in atlantic cod fast skeletal muscle.

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    Carlo C Lazado

    Full Text Available The classical notion of a centralized clock that governs circadian rhythmicity has been challenged with the discovery of peripheral oscillators that enable organisms to cope with daily changes in their environment. The present study aimed to identify the molecular clock components in Atlantic cod (Gadus morhua and to investigate their daily gene expression in fast skeletal muscle. Atlantic cod clock genes were closely related to their orthologs in teleosts and tetrapods. Synteny was conserved to varying degrees in the majority of the 18 clock genes examined. In particular, aryl hydrocarbon receptor nuclear translocator-like 2 (arntl2, RAR-related orphan receptor A (rora and timeless (tim displayed high degrees of conservation. Expression profiling during the early ontogenesis revealed that some transcripts were maternally transferred, namely arntl2, cryptochrome 1b and 2 (cry1b and cry2, and period 2a and 2b (per2a and per2b. Most clock genes were ubiquitously expressed in various tissues, suggesting the possible existence of multiple peripheral clock systems in Atlantic cod. In particular, they were all detected in fast skeletal muscle, with the exception of neuronal PAS (Per-Arnt-Single-minded domain-containing protein (npas1 and rora. Rhythmicity analysis revealed 8 clock genes with daily rhythmic expression, namely arntl2, circadian locomotor output cycles kaput (clock, npas2, cry2, cry3 per2a, nuclear receptor subfamily 1, group D, member 1 (nr1d1, and nr1d2a. Transcript levels of the myogenic genes myogenic factor 5 (myf5 and muscleblind-like 1 (mbnl1 strongly correlated with clock gene expression. This is the first study to unravel the molecular components of peripheral clocks in Atlantic cod. Taken together, our data suggest that the putative clock system in fast skeletal muscle of Atlantic cod has regulatory implications on muscle physiology, particularly in the expression of genes related to myogenesis.

  6. Spatiotemporal SNP analysis reveals pronounced biocomplexity at the northern range margin of Atlantic cod Gadus morhua

    DEFF Research Database (Denmark)

    Therkildsen, Nina Overgaard; Hansen, Jakob Hemmer; Hedeholm, R.B.;

    2013-01-01

    Accurate prediction of species distribution shifts in the face of climate change requires a sound understanding of population diversity and local adaptations. Previous modeling has suggested that global warming will lead to increased abundance of Atlantic cod (Gadus morhua) in the ocean around...... Greenland, but the dynamics of earlier abundance fluctuations are not well understood. We applied a retrospective spatiotemporal population genomics approach to examine the temporal stability of cod population structure in this region and to search for signatures of divergent selection over a 78-year period...

  7. Time matters: post-surgical recovery of gastric evacuation rate in Atlantic cod

    DEFF Research Database (Denmark)

    Behrens, Jane; Gräns, Albin; Andersen, Niels Gerner;

    GER was affected after surgically introducing dummies of a blood-flow biotelemetry system into the abdominal cavity of Atlantic cod. Two days post surgery the cod with implants were, together with a control group, force-fed a standardized meal and the stomach contents recovered 24h later....... This procedure was repeated for both groups of fish after one additional week of recovery. After two days GER was significantly lower in the group of fish with surgical implants compared to the control group, but the difference was not maintained after one additional week of recovery. We conclude that 10 days...... of postsurgical recovery will stabilize GER in cod. The results indicate that the presence of the implant per se did not affect GER but that the effects observed came from surgery and/or postsurgical stress. 10 days should consequently be a starting point for future studies even if longer recovery periods...

  8. Distribution and drift of Atlantic cod ( Gadus morhua ) eggs and larvae in Greenland offshore waters

    DEFF Research Database (Denmark)

    Wieland, Kai; Hovgård, Holger

    2002-01-01

    Catches of Atlantic cod (Gadus morhua) eggs and larvae from 45 national and international ichthyoplankton surveys conducted in Greenland offshore waters during the period 1950 to 1984 have been compiled and re-analysed. Southeast and Southwest Greenland were identified as im- portant spawning areas...... from which eggs and early larvae drift towards the southern Davis Strait. Only a part of the larval population remained in the vicinity of favourable settling areas off West Greenland while a considerable part was obviously transported westward across the Davis Strait and thus did not contribute...... to the recruitment of the West Greenland cod stock. It is also shown that cod eggs and larvae occasionally drift from Southwest Iceland across the Denmark Strait to the East Greenland shelf from where a subsequent transport and immigration of juveniles to West Greenland waters can occur. Larval transport across...

  9. Conserving marine biodiversity: insights from life-history trait candidate genes in Atlantic cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Hansen, Jakob Hemmer; Therkildsen, Nina Overgaard; Meldrup, Dorte;

    2014-01-01

    , phenotypic studies have suggested adaptation through divergence of life-history traits among natural populations, but the distribution of adaptive genetic variation in these species is still relatively poorly known. In this study, we extract information about the geographical distribution of genetic...... variation for 33 single nucleotide polymorphisms (SNPs) associated with life-history trait candidate genes, and compare this to variation in 70 putatively neutral SNPs in Atlantic cod (Gadus morhua). We analyse samples covering the major population complexes in the eastern Atlantic and find strong evidence...

  10. The effect of carbon dioxide on growth of juvenile Atlantic cod Gadus morhua L

    DEFF Research Database (Denmark)

    Moran, Damian; Støttrup, Josianne

    2011-01-01

    A trial was undertaken to investigate how exposure to graded hypercapnia affected the growth performance of juvenile (15-80 g) Atlantic cod. Juveniles were grown at 20‰ salinity and 10 °C for 55 days under three hypercapnic regimes: low (2 ± 0.9 mg L−1 CO2, 0.6 mm Hg, 1000 μatm), medium (8 ± 0.5 ...

  11. Male size composition affects male reproductive variance in Atlantic cod Gadus morhua L. spawning aggregations

    DEFF Research Database (Denmark)

    Bekkevold, Dorte

    2006-01-01

    Estimates of Atlantic cod Gadus morhua reproductive success, determined using experimental spawning groups and genetic paternity assignment of offspring, showed that within-group variance in male size correlated positively with the degree of male mating skew, predicting a decrease in male...... reproductive skew with decreasing size variation among males under natural conditions. (c) 2006 The Author Journal compilation (c) 2006 The Fisheries Society of the British Isles...

  12. Isolation and characterisation of two cDNAs encoding transglutaminase from Atlantic cod (Gadus morhua).

    Science.gov (United States)

    Furnes, Clemens; Kileng, Øyvind; Jensen, Ingvill; Karki, Pralav; Eichacker, Lutz; Robertsen, Børre

    2014-01-01

    Two cDNAs encoding transglutaminase (TG) were identified in a subtractive cDNA library prepared from the head kidney of poly I:C stimulated Atlantic cod (Gadus morhua). Full-length TG-1 and TG-2 cDNA were cloned from the head kidney by a reverse-transcription polymerase chain reaction (RT-PCR) and rapid amplification of cDNA ends (RACE). The deduced amino acid (aa) sequence for TG-1 was 695 aa with an estimated molecular mass of 78.3 kDa, while TG-2 was a 698 aa protein with an estimated molecular mass of 78.8 kDa. The two proteins were named TG-1 and TG-2 and both possess transglutaminase/protease-like homologous domains (TGc) and full conservation of amino acids cysteine, histidine, and aspartate residues that form the catalytic triad. Sequence analysis showed high similarity (93.1%) with Alaska pollock TG, and the TGs were grouped together with TGs from chum salmon, Japanese flounder, Nile tilapia, and red sea bream in addition to Alaska pollock in phylogenetic analysis. Interestingly, they showed different tissue distribution with highest constitutive expression in reproductive and immunological organs, indicating important roles in these organs. Furthermore, the up-regulation of TG-1 and TG-2 in head kidney after stimulating Atlantic cod with poly I:C suggested a role of TGs in immune response in Atlantic cod.

  13. Molecular cloning and characterization of bloodthirsty from Atlantic cod (Gadus morhua).

    Science.gov (United States)

    Furnes, Clemens; Robertsen, Børre

    2010-12-01

    The tripartite motif (TRIM) proteins are involved in a variety of cellular functions including cell proliferation, differentiation, development, oncogenesis, apoptosis and antiviral activity. In this study, we report the identification and characterization of an Atlantic cod tripartite motif-containing protein named bloodthirsty from a poly I:C subtractive cDNA library. The Atlantic cod bloodthirsty (Acbloodthirsty) has a predicted open reading frame of 541 amino acids, encoding a putative 64-kDa protein. The N-terminal region contains the three motifs typical of TRIM proteins, a RING finger, one B-box, and a coiled-coil domain, which together form the TRIM motif found in this large family of proteins, whereas the C-terminal region contains a PRYSPRY domain. The intracellular localization of Acbloodthirsty in CHSE-214 cells showed mostly diffuse staining with some discrete compartments in the cytoplasm. The induction of bloodthirsty transcripts by poly I:C was seen in spleen using quantitative reverse transcriptase PCR (RT-qPCR). The expression pattern indicates that Acbloodthirsty is involved in antiviral immune response in Atlantic cod.

  14. Long distance linkage disequilibrium and limited hybridization suggest cryptic speciation in atlantic cod.

    Directory of Open Access Journals (Sweden)

    Ian R Bradbury

    Full Text Available Hybrid zones provide unprecedented opportunity for the study of the evolution of reproductive isolation, and the extent of hybridization across individuals and genomes can illuminate the degree of isolation. We examine patterns of interchromosomal linkage disequilibrium (ILD and the presence of hybridization in Atlantic cod, Gadus morhua, in previously identified hybrid zones in the North Atlantic. Here, previously identified clinal loci were mapped to the cod genome with most (∼70% occurring in or associated with (<5 kb coding regions representing a diverse array of possible functions and pathways. Despite the observation that clinal loci were distributed across three linkage groups, elevated ILD was observed among all groups of clinal loci and strongest in comparisons involving a region of low recombination along linkage group 7. Evidence of ILD supports a hypothesis of divergence hitchhiking transitioning to genome hitchhiking consistent with reproductive isolation. This hypothesis is supported by Bayesian characterization of hybrid classes present and we find evidence of common F1 hybrids in several regions consistent with frequent interbreeding, yet little evidence of F2 or backcrossed individuals. This work suggests that significant barriers to hybridization and introgression exist among these co-occurring groups of cod either through strong selection against hybrid individuals, or genetic incompatibility and intrinsic barriers to hybridization. In either case, the presence of strong clinal trends, and little gene flow despite extensive hybridization supports a hypothesis of reproductive isolation and cryptic speciation in Atlantic cod. Further work is required to test the degree and nature of reproductive isolation in this species.

  15. The Effects of Temperature, Hypoxia and Hypercapnia on the Metabolism of Atlantic Cod Gadus morhua

    DEFF Research Database (Denmark)

    Tirsgård, Bjørn

    suggested that cod make excursions into sever hypoxic water layers likely to search for benthic fauna (Neuenfeldt et al., 2009). The aim of paper IV was therefore to simulate a 40 min excursion into severe hypoxic water below Scrit and determine a possible additional energy cost. The study showed......The Atlantic cod (Gadus morhua L. 1758) is an important species both as a major top predator in the ecosystem and economical marine resource in the fishing industry of Northern Europe (Andersen, 2012). As an ectothermic water breather the Atlantic cod is continuously exposed to annual changes...... in the water conditions affecting their performance, growth and reproduction. Variations in the water conditions between years and due to climatic changes, affects the survival rate, population dynamic and bio-energetic distribution of the Atlantic cod (Hansson et al., 1996; Essington et al., 2001...

  16. Physiological and behavioural responses to noxious stimuli in the Atlantic cod (Gadus morhua.

    Directory of Open Access Journals (Sweden)

    Jared R Eckroth

    Full Text Available In the present study, our aim was to compare physiological and behavioural responses to different noxious stimuli to those of a standardized innocuous stimulus, to possibly identify aversive responses indicative of injury detection in a commercially important marine teleost fish, the Atlantic cod. Individual fish were administered with a noxious stimulus to the lip under short-term general anaesthesia (MS-222. The noxious treatments included injection of 0.1% or 2% acetic acid, 0.005% or 0.1% capsaicin, or piercing the lip with a commercial fishing hook. Counts of opercular beat rate (OBR at 10, 30, 60, 90 and 120 min and observations of behaviour at 30 and 90 min post-treatment were compared with pre-treatment values and with control fish injected with physiological saline, an innocuous stimulus. Circulatory levels of physiological stress indicators were determined in all fish at 120 minutes post-treatment. All treatments evoked temporarily increased OBR that returned to pre-treatment levels at 60 minutes (saline, 0.005% capsaicin, hook, 90 minutes (0.1% acetic acid, 0.1% capsaicin, or 120 minutes (2% acetic acid, but with no significant differences from the control group at any time point. Fish treated with 0.1% and 2% acetic acid and 0.1% capsaicin displayed increased hovering close to the bottom of the aquaria and fish given 2% acetic acid and 0.1% capsaicin also displayed a reduced use of shelter. The only effect seen in hooked fish was brief episodes of lateral head shaking which were not seen pre-treatment or in the other groups, possibly reflecting a resiliency to tissue damage in the mouth area related to the tough nature of the Atlantic cod diet. There were no differences between groups in circulatory stress indicators two hours after treatment. This study provides novel data on behavioural indicators that could be used to assess potentially aversive events in Atlantic cod.

  17. Bacterial composition and succession during storage of North-Atlantic cod (Gadus morhua at superchilled temperatures

    Directory of Open Access Journals (Sweden)

    Marteinsson Viggó

    2009-12-01

    Full Text Available Abstract Background The bacteriology during storage of the North-Atlantic cod has been investigated for the past decades using conventional cultivation strategies which have generated large amount of information. This paper presents a study where both conventional cultivation and cultivation independent approaches were used to investigate the bacterial succession during storage of cod loins at chilled and superchilled temperatures. Results Unbrined (0.4% NaCl and brined (2.5% NaCl cod loins were stored at chilled (0°C and superchilled (-2 and -3.6°C temperatures in air or modified atmosphere (MA, % CO2/O2/N2: 49.0 ± 0.6/7.4 ± 0.2/43.7 ± 0.4. Discrepancy was observed between cultivation enumeration and culture independent methods where the former showed a general dominance of Pseudomonas spp. (up to 59% while the latter showed a dominance of Photobacterium phosphoreum (up to 100%. Gas chromatography-mass spectrophotometry (GC-MC showed that trimethylamine was the most abundant volatile in mid- and late storage periods. Terminal restriction polymorphism (t-RFLP analysis showed that the relative abundance of P. phosphoreum increased with storage time. Conclusion The present study shows the bacteriological developments on lightly salted or non-salted cod loins during storage at superchilled temperatures. It furthermore confirms the importance of P. phosphoreum as a spoilage organism during storage of cod loins at low temperatures using molecular techniques. The methods used compensate each other, giving more detailed data on bacterial population developments during spoilage.

  18. Diet affects the redox system in developing Atlantic cod (Gadus morhua larvae

    Directory of Open Access Journals (Sweden)

    Samuel Penglase

    2015-08-01

    Full Text Available The growth and development of marine fish larvae fed copepods is superior to those fed rotifers, but the underlying molecular reasons for this are unclear. In the following study we compared the effects of such diets on redox regulation pathways during development of Atlantic cod (Gadus morhua larvae. Cod larvae were fed a control diet of copepods or the typical rotifer/Artemia diet commonly used in commercial marine fish hatcheries, from first feeding until after metamorphosis. The oxidised and reduced glutathione levels, the redox potential, and the mRNA expression of 100 genes in redox system pathways were then compared between treatments during larval development. We found that rotifer/Artemia-fed cod larvae had lower levels of oxidised glutathione, a more reduced redox potential, and altered expression of approximately half of the redox system genes when compared to copepod-fed larvae. This rotifer/Artemia diet-induced differential regulation of the redox system was greatest during periods of suboptimal growth. Upregulation of the oxidative stress response transcription factor, nrf2, and NRF2 target genes in rotifer/Artemia fed larvae suggest this diet induced an NRF2-mediated oxidative stress response. Overall, the data demonstrate that nutritional intake plays a role in regulating the redox system in developing fish larvae. This may be a factor in dietary-induced differences observed in larval growth.

  19. Horizontal transmission of nervous necrosis virus between turbot Scophthalmus maximus and Atlantic cod Gadus morhua using cohabitation challenge.

    Science.gov (United States)

    Korsnes, Kjetil; Karlsbakk, Egil; Nylund, Are; Nerland, Audun Helge

    2012-05-15

    Experimental horizontal transmission of nervous necrosis virus (NNV) originating from halibut Hippoglossus hippoglossus was studied through cohabitation of intraperitoneally (i.p.) injected fish with uninfected fish for 125 d. The experimental groups consisted of i.p. injected turbot Scophthalmus maximus or i.p. injected Atlantic salmon Salmo salar with turbot, salmon or Atlantic cod Gadus morhua cohabitants. The initial weights were cod 10 g, salmon 40 g and turbot 3 g. NNV was detected in brain, eye and spleen by real-time reverse transcriptase PCR (qRT-PCR) in cod cohabitated with i.p. injected turbot after 90 and 125 d, suggesting NNV infection was transmitted horizontally from the turbot to cod. NNV was not detected in salmon that were cohabitated with i.p. challenged turbot or salmon. This study shows that NNV strains belonging to the Barfin Flounder Nervous Necrosis Virus (BFNNV) clade may be transmitted from halibut to cod via water. Hence there is a potential risk of horizontal transmission of the virus from farmed halibut to farmed and wild cod. The lack of detection of NNV in cohabitant salmon suggests that this fish species is less susceptible than cod, or not susceptible, to horizontal NNV transmission. This result might be influenced by the size of salmon, viral load in i.p. injected cohabitants or insufficient duration of the experiment.

  20. Feasibility of Ocean Acoustic Waveguide Remote Sensing (OAWRS of Atlantic Cod with Seafloor Scattering Limitations

    Directory of Open Access Journals (Sweden)

    Ankita D. Jain

    2013-12-01

    Full Text Available Recently reported declines in the population of Atlantic cod have led to calls for additional survey methods for stock assessments. In combination with conventional line-transect methods that may have ambiguities in sampling fish populations, Ocean Acoustic Waveguide Remote Sensing (OAWRS has been shown to have a potential for providing accurate stock assessments (Makris N.C., et al. Science 2009, 323, 1,734–1,737; 54th Northeast Regional Stock Assessment Workshop (54th SAW US Department of Commerce, Northeast Fisheries Science Center, 2012. The use of OAWRS technology enables instantaneous wide-area sensing of fish aggregations over thousands of square kilometers. The ratio of the intensity of scattered returns from fish versus the seafloor in any resolution cell typically determines the maximum fish detection range of OAWRS, which then is a function of fish population density, scattering amplitude and depth distribution, as well as the level of seafloor scattering. With the knowledge of oceanographic parameters, such as bathymetry, sound speed structure and attenuation, we find that a Rayleigh–Born volume scattering approach can be used to efficiently and accurately estimate seafloor scattering over wide areas. From hundreds of OAWRS measurements of seafloor scattering, we determine the Rayleigh–Born scattering amplitude of the seafloor, which we find has a ƒ2,4 frequency dependence below roughly 2 kHz in typical continental shelf environments along the US northeast coast. We then find that it is possible to robustly detect cod aggregations across frequencies at and near swim bladder resonance for observed spawningconfigurations along the U.S. northeast coast, roughly the two octave range 150–600 Hzfor water depths up to roughly 100 m. This frequency range is also optimal for long-rangeocean acoustic waveguide propagation, because it enables multimodal acoustic waveguidepropagation with minimal acoustic absorption and forward

  1. Residency, site fidelity and habitat use of Atlantic cod (Gadus morhua) at an offshore wind farm using acoustic telemetry.

    Science.gov (United States)

    Reubens, Jan T; Pasotti, Francesca; Degraer, Steven; Vincx, Magda

    2013-09-01

    Because offshore wind energy development is fast growing in Europe it is important to investigate the changes in the marine environment and how these may influence local biodiversity and ecosystem functioning. One of the species affected by these ecosystem changes is Atlantic cod (Gadus morhua), a heavily exploited, commercially important fish species. In this research we investigated the residency, site fidelity and habitat use of Atlantic cod on a temporal scale at windmill artificial reefs in the Belgian part of the North Sea. Acoustic telemetry was used and the Vemco VR2W position system was deployed to quantify the movement behaviour. In total, 22 Atlantic cod were tagged and monitored for up to one year. Many fish were present near the artificial reefs during summer and autumn, and demonstrated strong residency and high individual detection rates. When present within the study area, Atlantic cod also showed distinct habitat selectivity. We identified aggregation near the artificial hard substrates of the wind turbines. In addition, a clear seasonal pattern in presence was observed. The high number of fish present in summer and autumn alternated with a period of very low densities during the winter period.

  2. Characterization of Francisella sp., GM2212, the first Francisella isolate from marine fish, Atlantic cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Ottem, Karl F; Nylund, Are; Karlsbakk, Egil;

    2007-01-01

    A Francisella sp., isolate GM2212(T), previously isolated from diseased farmed Atlantic cod Gadus morhua in Norway is characterized. The complete 16S rDNA, 16S-23S intergenic spacer, 23S rDNA, 23S-5S intergenic spacer, 5S rDNA, FopA, lipoprotein TUL4 (LpnA), malate dehydrogenase and a hypothetical...

  3. Electrical stunning of farmed Atlantic cod Gadus morhua L.: a comparison of an industrial and experimental method

    NARCIS (Netherlands)

    Digre, H.; Erikson, U.; Misimi, E.; Lambooij, E.; Vis, van de J.W.

    2010-01-01

    An industrial and experimental electrical method for stunning farmed Atlantic cod in air and seawater (SW), respectively, were compared. The impacts of sedation with AQUI-S™ and exercise to exhaustion before electrical stunning were also assessed to monitor the possible depletion of rested muscle en

  4. A review of the evidence for genetic structure of cod ( Gadus morhua ) populations in the NW Atlantic and population affinities of larval cod off Newfoundland and the Gulf of St. Lawrence

    DEFF Research Database (Denmark)

    Ruzzante, D.E.; Taggart, C.T.; Cook, D.

    1999-01-01

    We review our recent studies on the genetic structure of Atlantic cod (Gadus morhua) populations in the NW Atlantic. Our conclusions are based on knowledge of polymorphism at microsatellite DNA loci combined with known aspects of cod biology and ecology and with known oceanographic features...... in the NW Atlantic. Three case studies illustrate genetic heterogeneity between cod populations at the meso- and large- scales of coastal embayments and offshore banks and at the small-scale of oceanographic features. Our results generally highlight the importance of combining genetic with physiological...... as barriers to gene-flow between and among neighboring and often contiguous cod populations in the NW Atlantic. We suggest that bathymetric and hydrodynamic/oceanographic structure represents a rational starting point for developing hypotheses aimed at assessing the genetic structure of high gene-flow marine...

  5. Chitosan as an edible invisible film for quality preservation of herring and atlantic cod.

    Science.gov (United States)

    Jeon, You-Jin; Kamil, Janak Y V A; Shahidi, Fereidoon

    2002-08-28

    The effect of chitosan with different molecular weights as coatings for shelf-life extension of fresh fillets of Atlantic cod (Gadus morhua) and herring (Clupea harengus) was evaluated over a 12-day storage at refrigerated temperature (4 +/- 1 degrees C). Three chitosan preparations from snow crab (Chinoecetes opilio) processing wastes, differing in viscosities and molecular weights, were prepared; their apparent viscosities (360, 57, and 14 cP) depended on the deacetylation time (4, 10, and 20 h, respectively) of the chitin precursor. Upon coating with chitosans, a significant (p chitosan after 4, 6, 8, 10, and 12 days of storage, respectively. Chitosan coating significantly (p chitosan were inter-related; the efficacy of chitosans with viscosities of 57 and 360 cP was superior to that of chitosan with a 14 cP viscosity. Thus, chitosan as edible coating would enhance the quality of seafoods during storage.

  6. Prey exoskeletons influence the course of gastric evacuation in Atlantic cod Gadus morhua

    DEFF Research Database (Denmark)

    Couturier, C. S.; Andersen, N. G.; Audet, C.

    2013-01-01

    This study examined the effects of prey exoskeleton characteristics on gastric evacuation patterns in Atlantic cod Gadus morhua. Three distinct stages were highlighted in the gastric evacuation of crustacean prey characterized by a robust exoskeleton. The experiments confirmed that the three shrimp...... of the prey exoskeleton all affected gastric evacuation: duration of initial delay, overall evacuation rate and a decreased evacuation rate at the end of the process. The power exponential function (PEF), with its shape parameter, described the course of evacuation for these prey types well, especially...... the initial delay. The PEF does not, however, allow describing evacuation by the current stomach content mass independent of meal size, which limits its usefulness in estimating consumption rates of wild G. morhua. To predict and describe gastric evacuation of prey with a robust exoskeleton, it is therefore...

  7. Climate warming causes life-history evolution in a model for Atlantic cod (Gadus morhua)

    Science.gov (United States)

    Holt, Rebecca E.; Jørgensen, Christian

    2014-01-01

    Climate change influences the marine environment, with ocean warming being the foremost driving factor governing changes in the physiology and ecology of fish. At the individual level, increasing temperature influences bioenergetics and numerous physiological and life-history processes, which have consequences for the population level and beyond. We provide a state-dependent energy allocation model that predicts temperature-induced adaptations for life histories and behaviour for the North-East Arctic stock (NEA) of Atlantic cod (Gadus morhua) in response to climate warming. The key constraint is temperature-dependent respiratory physiology, and the model includes a number of trade-offs that reflect key physiological and ecological processes. Dynamic programming is used to find an evolutionarily optimal strategy of foraging and energy allocation that maximizes expected lifetime reproductive output given constraints from physiology and ecology. The optimal strategy is then simulated in a population, where survival, foraging behaviour, growth, maturation and reproduction emerge. Using current forcing, the model reproduces patterns of growth, size-at-age, maturation, gonad production and natural mortality for NEA cod. The predicted climate responses are positive for this stock; under a 2°C warming, the model predicted increased growth rates and a larger asymptotic size. Maturation age was unaffected, but gonad weight was predicted to more than double. Predictions for a wider range of temperatures, from 2 to 7°C, show that temperature responses were gradual; fish were predicted to grow faster and increase reproductive investment at higher temperatures. An emergent pattern of higher risk acceptance and increased foraging behaviour was also predicted. Our results provide important insight into the effects of climate warming on NEA cod by revealing the underlying mechanisms and drivers of change. We show how temperature-induced adaptations of behaviour and several life

  8. Harvest selection on Atlantic cod behavioral traits: implications for spatial management.

    Science.gov (United States)

    Olsen, Esben Moland; Heupel, Michelle R; Simpfendorfer, Colin A; Moland, Even

    2012-07-01

    Harvesting wild populations may contrast or reinforce natural agents of selection and potentially cause evolutionary changes in life-history traits such as growth and maturation. Harvest selection may also act on behavioral traits, although this field of research has so far received less attention. We used acoustic tags and a network of receivers to monitor the behavior and fate of individual Atlantic cod (Gadus morhua, N = 60) in their natural habitat on the Norwegian Skagerrak coast. Fish with a strong diel vertical migration, alternating between shallow- and deep-water habitats, had a higher risk of being captured in the fishery (traps, gillnet, hand line) as compared to fish that stayed in deeper water. There was also a significant negative correlation between fish size (30-66 cm) and the magnitude of diel vertical migration. Natural selection on behavior was less clear, but tended to favor fish with a large activity space. On a monthly time scale we found significant repeatabilities for cod behavior, meaning that individual characteristics tended to persist and therefore may be termed personality traits. We argue that an evolutionary approach to fisheries management should consider fish behavior. This would be of particular relevance for spatial management actions such as marine reserve design.

  9. Ocean Acidification Effects on Atlantic Cod Larval Survival and Recruitment to the Fished Population

    Science.gov (United States)

    Stiasny, Martina H.; Mittermayer, Felix H.; Sswat, Michael; Voss, Rüdiger; Jutfelt, Fredrik; Chierici, Melissa; Puvanendran, Velmurugu; Mortensen, Atle; Reusch, Thorsten B. H.; Clemmesen, Catriona

    2016-01-01

    How fisheries will be impacted by climate change is far from understood. While some fish populations may be able to escape global warming via range shifts, they cannot escape ocean acidification (OA), an inevitable consequence of the dissolution of anthropogenic carbon dioxide (CO2) emissions in marine waters. How ocean acidification affects population dynamics of commercially important fish species is critical for adapting management practices of exploited fish populations. Ocean acidification has been shown to impair fish larvae’s sensory abilities, affect the morphology of otoliths, cause tissue damage and cause behavioural changes. Here, we obtain first experimental mortality estimates for Atlantic cod larvae under OA and incorporate these effects into recruitment models. End-of-century levels of ocean acidification (~1100 μatm according to the IPCC RCP 8.5) resulted in a doubling of daily mortality rates compared to present-day CO2 concentrations during the first 25 days post hatching (dph), a critical phase for population recruitment. These results were consistent under different feeding regimes, stocking densities and in two cod populations (Western Baltic and Barents Sea stock). When mortality data were included into Ricker-type stock-recruitment models, recruitment was reduced to an average of 8 and 24% of current recruitment for the two populations, respectively. Our results highlight the importance of including vulnerable early life stages when addressing effects of climate change on fish stocks. PMID:27551924

  10. Ocean Acidification Effects on Atlantic Cod Larval Survival and Recruitment to the Fished Population.

    Science.gov (United States)

    Stiasny, Martina H; Mittermayer, Felix H; Sswat, Michael; Voss, Rüdiger; Jutfelt, Fredrik; Chierici, Melissa; Puvanendran, Velmurugu; Mortensen, Atle; Reusch, Thorsten B H; Clemmesen, Catriona

    2016-01-01

    How fisheries will be impacted by climate change is far from understood. While some fish populations may be able to escape global warming via range shifts, they cannot escape ocean acidification (OA), an inevitable consequence of the dissolution of anthropogenic carbon dioxide (CO2) emissions in marine waters. How ocean acidification affects population dynamics of commercially important fish species is critical for adapting management practices of exploited fish populations. Ocean acidification has been shown to impair fish larvae's sensory abilities, affect the morphology of otoliths, cause tissue damage and cause behavioural changes. Here, we obtain first experimental mortality estimates for Atlantic cod larvae under OA and incorporate these effects into recruitment models. End-of-century levels of ocean acidification (~1100 μatm according to the IPCC RCP 8.5) resulted in a doubling of daily mortality rates compared to present-day CO2 concentrations during the first 25 days post hatching (dph), a critical phase for population recruitment. These results were consistent under different feeding regimes, stocking densities and in two cod populations (Western Baltic and Barents Sea stock). When mortality data were included into Ricker-type stock-recruitment models, recruitment was reduced to an average of 8 and 24% of current recruitment for the two populations, respectively. Our results highlight the importance of including vulnerable early life stages when addressing effects of climate change on fish stocks.

  11. Ocean Acidification Portends Acute Habitat Compression for Atlantic Cod (Gadus morhua) in a Physiologically-informed Metabolic Rate Model

    Science.gov (United States)

    Del Raye, G.; Weng, K.

    2011-12-01

    Ocean acidification affects organisms on a biochemical scale, yet its societal impacts manifest from changes that propagate through entire populations. Successful forecasting of the effects of ocean acidification therefore depends on at least two steps: (1) deducing systemic physiology based on subcellular stresses and (2) scaling individual physiology up to ecosystem processes. Predictions that are based on known biological processes (process-based models) may fare better than purely statistical models in both these steps because the latter are less robust to novel environmental conditions. Here we present a process-based model that uses temperature, pO2, and pCO2 to predict maximal aerobic scope in Atlantic cod. Using this model, we show that (i) experimentally-derived physiological parameters are sufficient to capture the response of cod aerobic scope to temperature and oxygen, and (ii) subcellular pH effects can be used to predict the systemic physiological response of cod to an acidified ocean. We predict that acute pH stress (on a scale of hours) could limit the mobility of Atlantic cod during diel vertical migration across a pCO2 gradient, promoting habitat compression. Finally, we use a global sensitivity analysis to identify opportunities for the improvement of model uncertainty as well as some physiological adaptations that could mitigate climate stresses on cod in the future.

  12. Effects of hypoxic exposure during feeding on SDA and postprandial cardiovascular physiology in the Atlantic cod, Gadus morhua

    DEFF Research Database (Denmark)

    Behrens, Jane; Axelsson, Michael; Neuenfeldt, Stefan;

    2012-01-01

    Some Atlantic cod in the Bornholm Basin undertake vertical foraging migrations into severely hypoxic bottom water. Hypoxic conditions can reduce the postprandial increase in gastrointestinal blood flow (GBF). This could subsequently postpone or reduce the postprandial increase in oxygen consumption...... on fed G. morhua in order to understand how the cardio-respiratory system of feeding fish respond to a period of hypoxia and a subsequent return to normoxia. These were exposed to 35% water oxygen saturation for 90 minutes, equivalent to the time and oxygen level cod voluntarily endure when searching...... course of the measured variables are similar to values obtained from fish not exposed to the hypoxic period. In conclusion, when cod in the field search for and ingest prey under moderate hypoxic conditions they appear to stay within safe limits of oxygen availability as we saw no indications...

  13. Effects of chronic produced water exposure on the expression of some immune-related genes of juvenile Atlantic cod

    Energy Technology Data Exchange (ETDEWEB)

    Perez Casanova, J.; Hamoutene, D.; Samuelson, S.; Burt, K.; King, T. [Fisheries and Oceans Canada, St. John' s, NL (Canada); Lee, K. [Fisheries and Oceans Canada, Dartmouth, NS (Canada)

    2010-07-01

    This study assessed the impacts of exposure to processed water produced by offshore oil operators on immune-related genes of juvenile Atlantic cod exposed to processed water for a period of 22 weeks. The study investigated the influence of processed water concentrations on growth parameters; food consumption; plasma cortisol; respiratory burst activity (RB); and mRNA expression. The study showed that the RB of circulating leukocytes was significantly elevated. Significant up-regulation of the mRNA expression of microglobulin, immunoglobulin light chain, and interleukins was observed in some fish. The down-regulation of the interferon stimulated gene was also observed. The study indicated that chronic exposure to significant amounts of processed water causes modulations of the immune system of juvenile Atlantic cod.

  14. Experimental Challenge of Atlantic Cod (Gadus morhua) with a Brucella pinnipedialis Strain from Hooded Seal (Cystophora cristata)

    Science.gov (United States)

    Nymo, Ingebjørg Helena; Seppola, Marit; Al Dahouk, Sascha; Bakkemo, Kathrine Ryvold; Jiménez de Bagüés, María Pilar; Godfroid, Jacques; Larsen, Anett Kristin

    2016-01-01

    Pathology has not been observed in true seals infected with Brucella pinnipedialis. A lack of intracellular survival and multiplication of B. pinnipedialis in hooded seal (Cystophora cristata) macrophages in vitro indicates a lack of chronic infection in hooded seals. Both epidemiology and bacteriological patterns in the hooded seal point to a transient infection of environmental origin, possibly through the food chain. To analyse the potential role of fish in the transmission of B. pinnipedialis, Atlantic cod (Gadus morhua) were injected intraperitoneally with 7.5 x 107 bacteria of a hooded seal field isolate. Samples of blood, liver, spleen, muscle, heart, head kidney, female gonads and feces were collected on days 1, 7, 14 and 28 post infection to assess the bacterial load, and to determine the expression of immune genes and the specific antibody response. Challenged fish showed an extended period of bacteremia through day 14 and viable bacteria were observed in all organs sampled, except muscle, until day 28. Neither gross lesions nor mortality were recorded. Anti-Brucella antibodies were detected from day 14 onwards and the expression of hepcidin, cathelicidin, interleukin (IL)-1β, IL-10, and interferon (IFN)-γ genes were significantly increased in spleen at day 1 and 28. Primary mononuclear cells isolated from head kidneys of Atlantic cod were exposed to B. pinnipedialis reference (NCTC 12890) and hooded seal (17a-1) strain. Both bacterial strains invaded mononuclear cells and survived intracellularly without any major reduction in bacterial counts for at least 48 hours. Our study shows that the B. pinnipedialis strain isolated from hooded seal survives in Atlantic cod, and suggests that Atlantic cod could play a role in the transmission of B. pinnipedialis to hooded seals in the wild. PMID:27415626

  15. Atlantic cod (Gadus morhua L.) possesses three homologues of ISG15 with different expression kinetics and conjugation properties.

    Science.gov (United States)

    Furnes, Clemens; Kileng, Øyvind; Rinaldo, Christine Hanssen; Seppola, Marit; Jensen, Ingvill; Robertsen, Børre

    2009-12-01

    Two new interferon stimulated gene 15 (ISG15) family members were identified in a subtractive cDNA library constructed from a mixture of head kidney and spleen of Atlantic cod (Gadus morhua) stimulated with polyinosinic:polycytidylic acid (poly I:C). Two full-length Atlantic cod (Ac) ISG15-2 and AcISG15-3 cDNAs were cloned with rapid amplification of cDNA ends (RACE). The cDNA sequence of AcISG15-2 encodes a 16.9kDa protein and AcISG15-3 encodes a 18.4kDa protein, both of which possess the characteristic structural features of two tandem ubiquitin-like domains and the LRGG motif necessary for conjugation. Furthermore, the AcISG15-3 protein is expressed with a C-terminal extension in common with the human ISG15 protein. Gene expression analysis using quantitative reverse transcriptase PCR (RT-qPCR) showed that AcISG15-1, AcISG15-2, and AcISG15-3 transcripts were up-regulated in head kidney after poly I:C stimulation, suggesting that these proteins may be involved in the cod immune response. However, transient expression of myc-tagged AcISG15 proteins revealed differences in their abilities to form conjugates in vitro. We show that AcISG15-2 forms covalent conjugates to a range of cellular protein as a response to poly I:C, recombinant Atlantic salmon IFNa1 (rSasaIFNa1) and infectious pancreatic necrosis virus (IPNV), whereas conjugation was absent for AcISG15-1 and AcISG15-3. Thus, these results suggest there are three ISG15 homologues in Atlantic cod and that the three proteins may play different roles in innate immunity.

  16. Severe tissue damage in Atlantic cod larvae under increasing ocean acidification

    Science.gov (United States)

    Frommel, Andrea Y.; Maneja, Rommel; Lowe, David; Malzahn, Arne M.; Geffen, Audrey J.; Folkvord, Arild; Piatkowski, Uwe; Reusch, Thorsten B. H.; Clemmesen, Catriona

    2012-01-01

    Ocean acidification, caused by increasing atmospheric concentrations of CO2 (refs , , ), is one of the most critical anthropogenicthreats to marine life. Changes in seawater carbonate chemistry have the potential to disturb calcification, acid-base regulation, blood circulation and respiration, as well as the nervous system of marine organisms, leading to long-term effects such as reduced growth rates and reproduction. In teleost fishes, early life-history stages are particularly vulnerable as they lack specialized internal pH regulatory mechanisms. So far, impacts of relevant CO2 concentrations on larval fish have been found in behaviour and otolith size, mainly in tropical, non-commercial species. Here we show detrimental effects of ocean acidification on the development of a mass-spawning fish species of high commercial importance. We reared Atlantic cod larvae at three levels of CO2, (1) present day, (2) end of next century and (3) an extreme, coastal upwelling scenario, in a long-term ( months) mesocosm experiment. Exposure to CO2 resulted in severe to lethal tissue damage in many internal organs, with the degree of damage increasing with CO2 concentration. As larval survival is the bottleneck to recruitment, ocean acidification has the potential to act as an additional source of natural mortality, affecting populations of already exploited fish stocks.

  17. Zschokkella hildae Auerbach, 1910: phylogenetic position, morphology, and location in cultured Atlantic cod.

    Science.gov (United States)

    Holzer, Astrid Sibylle; Wootten, Rod; Sommerville, Christina

    2010-06-01

    The myxozoan Zschokkella hildae Auerbach, 1910, was detected with a prevalence of 100% in cultured Atlantic cod, Gadus morhua L. aged 1+ from a culture facility on the west coast of Scotland. Sporogonic stages of Z. hildae, plasmodia producing 2-5 mature spores, were located predominantly in the collecting ducts and ureters of the kidney, and spores were present in the urine collected from the bladder. Less frequently, plasmodia were detected in the interstitial tissue of the kidney. The parasite prevalence in cultured fish was considerably higher than reported in wild fish but no obvious signs of pathology were detected. SSU rDNA sequencing and phylogenetic analysis showed that Z. hildae is closely related to a Sinuolinea sp. from the urinary system of turbot, Psetta maxima (L.), and that these two species, together with other myxozoans from the urinary system of marine fish cluster together in a sub-clade of the recognised marine clade of myxozoans. This sub-clade is characterised by a specific linear expansion segment, helix E23_15 in the secondary structure of variable region V4 of the SSU rDNA. Z. hildae and Sinuolinea sp. show extraordinary large linear expansion segment in both V4 and V7 and an important number of complementary base changes in the conservative regions of the SSU rDNA, indicating considerable evolutionary changes in the SSU rDNA of these species when compared with other myxozoans from the marine environment.

  18. Caseins from bovine colostrum and milk strongly bind piscidin-1, an antimicrobial peptide from fish.

    Science.gov (United States)

    Kütt, Mary-Liis; Stagsted, Jan

    2014-09-01

    A model system of bovine colostrum and piscidin, a fish-derived antimicrobial peptide, was developed to study potential interactions of antimicrobial peptides in colostrum. We did not detect any antimicrobial activity of colostrum using the radial plate diffusion assay; in fact colostrum completely abrogated activity of added piscidin. This could not be explained by degradation of piscidin by colostrum, which was less than ten percent. We found that colostrum even protected piscidin against degradation by added proteases. We further observed that colostrum and milk rapidly quenched the fluorescence of fluorescein-piscidin but not that of fluorescein. This effect was not seen with BSA and the specific quenching of fluorescein-piscidin by colostrum was saturably inhibited with unlabeled piscidin. Size exclusion chromatography indicated that fluorescein-piscidin bound to casein micelles with no apparent binding to IgG or whey proteins. Further, addition of pure caseins was able to quench fluorescence of fluorescein-piscidin and to inhibit the antimicrobial activity of piscidin. The interaction between caseins and piscidin could be dissociated by guanidine hydrochloride and recovered piscidin had antimicrobial activity against bacteria. Based on our results we propose that caseins could be carriers for antimicrobial peptides in colostrum and milk.

  19. Aerobic scope for activity in age 0 year Atlantic cod Gadus morhua.

    Science.gov (United States)

    Hansen, S L; von Herbing, I Hunt

    2009-05-01

    Key components of swimming metabolism: standard metabolism (R(s)), active metabolism (R(a)) and absolute aerobic scope for activity (R(a)-R(s)) were determined for small age 0 year Atlantic cod Gadus morhua. Gadus morhua juveniles grew from 0.50 to 2.89 g wet body mass (M(WB)) over the experimental period of 100 days, and growth rates (G) ranged from 1.4 to 2.9% day(-1), which decreased with increasing size. Metabolic rates were recorded by measuring changes in oxygen consumption over time at different activity levels using modified Brett-type respirometers designed to accommodate the small size and short swimming endurance of small fishes. Power performance relationships were established between oxygen consumption and swimming speed measurements were repeated for individual fish as each fish grew. Mass-specific standard metabolic rates (RsMWB-1) were calculated from the power performance relationships by extrapolating to zero swimming speed and decreased from 7.00 to 5.77 micromol O(2) g(-1) h(-1), mass-specific active metabolic rates (RaMWB-1) were calculated from extrapolation to maximum swimming speed (U(max)) and decreased from 26.18 to 14.35 micromol O(2) g(-1) h(-1) and mass-specific absolute scope for activity was calculated as the difference between active and standard metabolism (RaMWB-1-RsMWB-1) and decreased from 26.18 to 14.35 micromol O(2) g(-1) h(-1) as M(WB) increased. Small fish with low R(s) had bigger aerobic scopes but, as expected, R(s) was higher in smaller fish than larger fish. The measurements and results from this study are unique as R(s), R(a) and absolute aerobic scopes have not been previously determined for small age 0 year G. morhua.

  20. Temperature modulates the effects of ocean acidification on intestinal ion transport in Atlantic cod, Gadus morhua

    Directory of Open Access Journals (Sweden)

    Marian Yong-An Hu

    2016-06-01

    Full Text Available CO2-driven seawater acidification has been demonstrated to enhance intestinal bicarbonate secretion rates in teleosts, leading to an increased release of CaCO3 under simulated ocean acidification scenarios. In this study, we investigated if increasing CO2 levels stimulate the intestinal acid–base regulatory machinery of Atlantic cod (Gadus morhua and whether temperatures at the upper limit of thermal tolerance stimulate or counteract ion regulatory capacities. Juvenile G. morhua were acclimated for four weeks to three CO2 levels (550, 1,200 and 2,200 μatm covering present and near-future natural variability, at optimum (10°C and summer maximum temperature (18°C, respectively. Immunohistochemical analyses revealed the subcellular localization of ion transporters, including Na+/K+-ATPase (NKA, Na+/H+-exchanger 3 (NHE3, Na+/HCO3- cotransporter (NBC1, pendrin-like Cl-/HCO3- exchanger (SLC26a6, V-type H+-ATPase subunit a (VHA and Cl- channel 3 (CLC3 in epithelial cells of the anterior intestine. At 10°C, proteins and mRNA were generally up-regulated for most transporters in the intestinal epithelium after acclimation to higher CO2 levels. This supports recent findings demonstrating increased intestinal HCO3- secretion rates in response to CO2 induced seawater acidification. At 18°C, mRNA expression and protein concentrations of most ion transporters remained unchanged or were even decreased, suggesting thermal compensation. This response may be energetically favorable to retain blood HCO3- levels to stabilize pHe, but may negatively affect intestinal salt and water resorption of marine teleosts in future oceans.

  1. Temperature Modulates the Effects of Ocean Acidification on Intestinal Ion Transport in Atlantic Cod, Gadus morhua

    Science.gov (United States)

    Hu, Marian Y.; Michael, Katharina; Kreiss, Cornelia M.; Stumpp, Meike; Dupont, Sam; Tseng, Yung-Che; Lucassen, Magnus

    2016-01-01

    CO2-driven seawater acidification has been demonstrated to enhance intestinal bicarbonate secretion rates in teleosts, leading to an increased release of CaCO3 under simulated ocean acidification scenarios. In this study, we investigated if increasing CO2 levels stimulate the intestinal acid–base regulatory machinery of Atlantic cod (Gadus morhua) and whether temperatures at the upper limit of thermal tolerance stimulate or counteract ion regulatory capacities. Juvenile G. morhua were acclimated for 4 weeks to three CO2 levels (550, 1200, and 2200 μatm) covering present and near-future natural variability, at optimum (10°C) and summer maximum temperature (18°C), respectively. Immunohistochemical analyses revealed the subcellular localization of ion transporters, including Na+/K+-ATPase (NKA), Na+/H+-exchanger 3 (NHE3), Na+/HCO3− cotransporter (NBC1), pendrin-like Cl−/HCO3− exchanger (SLC26a6), V-type H+-ATPase subunit a (VHA), and Cl− channel 3 (CLC3) in epithelial cells of the anterior intestine. At 10°C, proteins and mRNA were generally up-regulated for most transporters in the intestinal epithelium after acclimation to higher CO2 levels. This supports recent findings demonstrating increased intestinal HCO3− secretion rates in response to CO2 induced seawater acidification. At 18°C, mRNA expression and protein concentrations of most ion transporters remained unchanged or were even decreased, suggesting thermal compensation. This response may be energetically favorable to retain blood HCO3− levels to stabilize pHe, but may negatively affect intestinal salt and water resorption of marine teleosts in future oceans. PMID:27313538

  2. Genotype by Environment Interaction for Growth in Atlantic Cod (Gadus morhua L. in Four Farms of Norway

    Directory of Open Access Journals (Sweden)

    Rama Bangera

    2015-06-01

    Full Text Available We studied genotype by environment interaction (G × E for body weight (BW of Atlantic cod (Gadus morhua L. from the National cod breeding program in Norway. Records of 13,811 fish in a nucleus farm (NUC and two test farms (PENorth, PESouth in year-class (YC 2007, and for 9149 fish in NUC and one test farm in YC 2010 were available. Heterogeneity of variances and heritabilities ( were estimated using a univariate animal model with environmental effects common to full-sibs (full-model. Genetic correlations ( between farms were estimated using a multivariate full-model and a reduced-model (without for each YC. Heterogeneity of  was observed in both YC 2007 (0.10 to 0.16 and YC 2010 (0.08 to 0.26. The estimates of  between NUC and test farms were relatively high for both models (0.81 ± 0.19 to 0.96 ± 0.17 and (0.81 ± 0.08 to 0.86 ± 0.04, suggesting low re-ranking of genotypes. Strong re-ranking of genotypes between PESouth and PENorth may be less important because most cod producers are situated close to the breeding nucleus. In conclusion, G × E between NUC and test farms were low and at present there is no need for separate breeding programs for BW in cod.

  3. Historical DNA reveals the demographic history of Atlantic cod (Gadus morhua) in medieval and early modern Iceland.

    Science.gov (United States)

    Ólafsdóttir, Guðbjörg Ásta; Westfall, Kristen M; Edvardsson, Ragnar; Pálsson, Snæbjörn

    2014-02-22

    Atlantic cod (Gadus morhua) vertebrae from archaeological sites were used to study the history of the Icelandic Atlantic cod population in the time period of 1500-1990. Specifically, we used coalescence modelling to estimate population size and fluctuations from the sequence diversity at the cytochrome b (cytb) and Pantophysin I (PanI) loci. The models are consistent with an expanding population during the warm medieval period, large historical effective population size (NE), a marked bottleneck event at 1400-1500 and a decrease in NE in early modern times. The model results are corroborated by the reduction of haplotype and nucleotide variation over time and pairwise population distance as a significant portion of nucleotide variation partitioned across the 1550 time mark. The mean age of the historical fished stock is high in medieval times with a truncation in age in early modern times. The population size crash coincides with a period of known cooling in the North Atlantic, and we conclude that the collapse may be related to climate or climate-induced ecosystem change.

  4. Effects of dietary fatty acids on the production and quality of eggs and larvae of Atlantic cod (Gadus morhua L.)

    DEFF Research Database (Denmark)

    Røjbek, Maria; Støttrup, Josianne; Jacobsen, Charlotte;

    2014-01-01

    Cultivated Atlantic cod (Gadus morhua) entering their first year of gamete maturation were fed diets with different levels of arachidonic acid (ARA) and eicosapentaenoic acid (EPA) for 6.5 months prior to commencement of spawning. Gravid females were stripped three times: at the beginning, peak...... and end of spawning. Lipid composition and egg and larval quality of 34 family crosses were investigated. Results indicated that ARA uptake into eggs from broodstock diet was highly efficient achieving proportions of ARA up to 84% higher in eggs than in the diet. EPA was 42–76% higher, and DHA was 155...

  5. Skeletal muscle growth dynamics and the influence of first-feeding diet in Atlantic cod larvae (Gadus morhua L.

    Directory of Open Access Journals (Sweden)

    Tu A. Vo

    2016-11-01

    Full Text Available Dynamics between hypertrophy (increase in cell size and hyperplasia (increase in cell numbers of white and red muscle in relation to body size [standard length (SL], and the influence of the first-feeding diets on muscle growth were investigated in Atlantic cod larvae (Gadus morhua. Cod larvae were fed copepod nauplii or rotifers of different nutritional qualities from 4 to 29 days post hatching (dph, Artemia nauplii from 20 to 40 dph and a formulated diet from 36 to 60 dph. The short period of feeding with cultivated copepod nauplii had a positive effect on both muscle hyperplasia and hypertrophy after the copepod/rotifer phase (19 dph, and a positive long term effect on muscle hypertrophy (60 dph. The different nutritional qualities of rotifers did not significantly affect muscle growth. We suggest here a model of the dynamics between hyperplasia and hypertrophy of red and white muscle fibre cells in relation to cod SL (4 to 30 mm, where the different red and white muscle growth phases clearly coincided with different metamorphosis stages in cod larvae. These shifts could be included as biomarkers for the different stages of development during metamorphosis. The main dietary muscle effect was that hypertrophic growth of red muscle fibres was stronger in cod larvae that were fed copepods than in larvae that were fed rotifers, both in relation to larval age and size. Red muscle fibres are directly involved in larval locomotory performance, but may also play an important role in the larval myogenesis. This can have a long term effect on growth potential and fish performance.

  6. Sex differentiation in Atlantic cod (Gadus morhua L.: morphological and gene expression studies

    Directory of Open Access Journals (Sweden)

    Haugen Trine

    2012-06-01

    Full Text Available Abstract Background In differentiated gonochoristic species, a bipotential gonad develops into an ovary or testis during sex differentiation. Knowledge about this process is necessary to improve methods for masculinizing genetically female Atlantic cod for the subsequent purpose of producing all-female populations. Methods Gonads were examined histologically in juveniles from 14 to 39 mm total body length (TL. Number and size of germ cells were determined in a subset of the samples. Relevant genes were cloned, and mRNA levels determined by qPCR of amh, cyp19a1a; dax1 (nr0b2; shp (nr0b2a and sox9b in a mixed-sex and an all-female population ranging from 12–49 mm TL. Results Individuals between 14–20 mm TL could be separated in two subgroups based on gonad size and germ cell number. Ovarian cavity formation was observed in some individuals from 18–20 mm TL. The mixed sex population displayed bimodal expression patterns as regards cyp19a1a (starting at 12 mm TL and amh (starting at 20 mm TL mRNA levels. After approximately 30 mm TL, cyp19a1a and amh displayed a gradual increase in both sexes. No apparent, sex-dependent expression patterns were found for dax1, shp or sox9b transcripts. However, shp levels were high until the larvae reached around 35 mm TL and then dropped to low levels, while dax1 remained low until 35 mm TL, and then increased sharply. Conclusions The morphological sex differentiation in females commenced between 14–20 mm TL, and ovarian cavities were evident by 18–20 mm TL. Testis development occurred later, and was morphologically evident after 30 mm TL. This pattern was corroborated with sexually dimorphic expression patterns of cyp19a1a from 12–13 mm TL, and a male-specific increase in amh from 20 mm TL.

  7. Bay-scale population structure in coastal Atlantic cod in Labrador and Newfoundland, Canada

    DEFF Research Database (Denmark)

    Ruzzante, D.E.; Wroblewski, J.S.; Taggart, C.T.;

    2000-01-01

    of population structure suggest that important barriers to gene flow exist among five components that include two inshore (Gilbert and Trinity Bay) and three offshore cod aggregations on the north-east Newfoundland Shelf and the Grand Bank. D-A and D-SW estimates of genetic distance that involve Gilbert Bay cod...... fishery collapse. Harvesting strategies for northern cod should recognize the existence of genetic diversity between inshore and offshore components as well as among coastal components. (C) 2000 The Fisheries Society of the British Isles...

  8. Will you swim into my parlour? In situ observations of Atlantic cod (Gadus morhua) interactions with baited pots, with implications for gear design

    Science.gov (United States)

    Walsh, Philip; Favaro, Brett

    2017-01-01

    Pots (also known as traps) are baited fishing gears widely used in commercial fisheries, and are being considered as a tool for harvesting Atlantic cod (Gadus morhua) in Newfoundland and Labrador, Canada. Pots produce lower environmental impacts than many other fishing gears, but they will only be a viable fishing strategy if they are efficient and selective at catching their target species. To study the behaviour of cod in and around pots, and how those behaviours affect pot efficiency, we used long-duration underwater video cameras to assess two models of cod pot deployed in the nearshore waters of Fogo Island, NL. We examined the number of cod that approached the pot, the number and proportion that successfully completed entries into the pot openings, and the number that exited, and related these factors to the direction of water movement. We observed very few entry attempts relative to the number of approaches by cod, and only 22% of all entry attempts were successful. We observed that 50% of approaches, 70% of entry attempts, and 73% of successful entrances occurred against the current, and 25% of cod were able to exit the pot following capture. Based on our observations, we suggest that future cod pots should have a greater number of entrances, or a mechanism to ensure that entrances rotate in line with the current, in order to maximize their catch efficiency for cod.

  9. Hierarchical modelling of temperature and habitat size effects on population dynamics of North Atlantic cod

    DEFF Research Database (Denmark)

    Mantzouni, Irene; Sørensen, Helle; O'Hara, Robert B.;

    2010-01-01

    and Beverton and Holt stock–recruitment (SR) models were extended by applying hierarchical methods, mixed-effects models, and Bayesian inference to incorporate the influence of these ecosystem factors on model parameters representing cod maximum reproductive rate and carrying capacity. We identified...

  10. Amino acid sequence of the cold-active alkaline phosphatase from Atlantic cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Asgeirsson, Bjarni; Nielsen, Berit Noesgaard; Højrup, Peter

    2003-01-01

    -linked glycosylation sites were found. The glycan structure was determined as complex biantennary in type with fucose and sialic acid attached, although a trace of complex tri-antennary structure was also observed. A three-dimensional model was obtained by homology modelling using the human placental AP scaffold. Cod...

  11. The hypoxia avoidance behaviour of juvenile Atlantic cod (Gadus morhua L.) depends on the provision and pressure level of an O2 refuge

    DEFF Research Database (Denmark)

    Herbert, Neill A.; Skjaeraasen, Jon E.; Nilsen, Trygve

    2011-01-01

    The frequency of low O(2) (hypoxia) has increased in coastal marine areas but how fish avoid deleterious water masses is not yet clear. To assess whether the presence and oxygen pressure (PO(2)) level of an O(2) refuge affects the hypoxia avoidance behaviour of fish, individual Atlantic cod (Gadus...

  12. In vitro pH-Stat protein hydrolysis of feed ingredients for Atlantic cod, Gadus morhua. 1. Development of the method

    NARCIS (Netherlands)

    Tibbetts, S.; Milley, J.E.; Ross, N.W.; Verreth, J.A.J.; Lall, S.P.

    2011-01-01

    The method described here involves the extraction and partial purification of an enzyme fraction from the dissected pyloric caeca of commercially farmed Atlantic cod, Gadus morhua (1 kg fish) and the development of a pH-Stat method to predict protein digestibility. The various extraction and partial

  13. Functional genomic analysis of the response of Atlantic cod (Gadus morhua) spleen to the viral mimic polyriboinosinic polyribocytidylic acid (pIC).

    Science.gov (United States)

    Rise, Matthew L; Hall, Jennifer; Rise, Marlies; Hori, Tiago; Gamperl, A Kurt; Kimball, Jennifer; Hubert, Sophie; Bowman, Sharen; Johnson, Stewart C

    2008-01-01

    In order to improve our understanding of how Atlantic cod (Gadus morhua) respond to viruses, we characterized immune-related gene expression in spleen tissues following stimulation with a synthetic double-stranded RNA polyriboinosinic polyribocytidylic acid (pIC). We used reciprocal suppression subtractive hybridization (SSH) cDNA libraries and quantitative RTPCR (QPCR) to identify and quantify pIC-responsive transcripts. A total of 3874 expressed sequence tags (ESTs) were generated from SSH libraries enriched for genes responsive to pIC. Thirteen immune-relevant genes from the libraries were subjected to QPCR. Genes confirmed as up-regulated by pIC included interferon stimulated gene 15, a small inducible cytokine, interferon regulatory factors (1, 7, and 10), MHC class I, viperin, and ATP-dependent helicase LGP2. Alpha-1-microglobulin (bikunin) was down-regulated, suggesting that pIC may suppress the acute phase response. Since the SSH libraries built for this study identified genes involved in the antiviral response, they are important resources for studying the responses of Atlantic cod to viruses. Evidence is provided for the existence of a RIG-I-like RNA helicase viral recognition pathway in Atlantic cod. Taken together, our data show that Atlantic cod can recognize double-stranded RNA and mount a rapid and potent interferon pathway response that is similar to that observed in other fish species and higher vertebrates.

  14. What is the carrying capacity for fish in the ocean? A meta analysis of population dynamics of North Atlantic cod

    DEFF Research Database (Denmark)

    Myers, R.A.; MacKenzie, Brian; Bowen, K.G.;

    2001-01-01

    model 21 Atlanic cod (Gadus morhua) stocks in the North Atlantic assuming that the maximum reproductive rate and the carrying capacity per unit area are random variables. This method uses a nonlinear mixed model and is a natural approach to investigate how carrying capacity varies among populations. We...... used empirical Bayes techniques to estimate the maximum reproductive rate and carrying capacity of each stock. In all cases, the empirical Bayes estimates were biologically reasonable, whereas a stock by stock analysis occasionally yielded nonsensical parameter estimates (e.g., infinite values). Our...... analysis showed that the carrying capacity per unit area varied by more than 20-fold among populations and that much of this variation was related to temperature. That is, the carrying capacity per square kilometre declines as temperature increases....

  15. Evidence from data storage tags for the presence of lunar and semilunar behavioral cycles in spawning Atlantic cod

    Science.gov (United States)

    Grabowski, Timothy B.; McAdam, Bruce J.; Thorsteinsson, Vilhjalmur; Marteinsdóttir, Gudrún

    2015-01-01

    Understanding the environmental processes determining the timing and success of reproduction is of critical importance to developing effective management strategies of marine fishes. Unfortunately it has proven difficult to comprehensively study the reproductive behavior of broadcast-spawning fishes. The use of electronic data storage tags (DSTs) has the potential to provide insights into the behavior of fishes. These tags allow for data collection over relatively large spatial and temporal scales that can be correlated to predicted environmental conditions and ultimately be used to refine predictions of year class strength. In this paper we present data retrieved from DSTs demonstrating that events putatively identified as Atlantic cod spawning behavior is tied to a lunar cycle with a pronounced semi-lunar cycle within it. Peak activity occurs around the full and new moon with no evidence of relationship with day/night cycles.

  16. An investigation of appetite-related peptide transcript expression in Atlantic cod (Gadus morhua) brain following a Camelina sativa meal-supplemented feeding trial.

    Science.gov (United States)

    Tuziak, Sarah M; Rise, Matthew L; Volkoff, Hélène

    2014-10-25

    Camelina sativa is a hardy oilseed crop with seeds that contain high levels of ω3 polyunsaturated fatty acids and protein, which are critical components of fish feed. Camelina might thus be used as a cheaper and more sustainable supplement to fish-based products in aquaculture. Atlantic cod, Gadus morhua, is a species of interest in the aquaculture industry due to a decrease in wild populations and subsequent collapse of some cod fisheries. As cod are carnivorous fish, it is necessary to determine how this species physiologically tolerates plant-based diets. In this study, juvenile Atlantic cod were subjected to 13 weeks of either 15 or 30% camelina meal (CM)-supplemented diets or a control fish meal feed. Growth and food intake were evaluated and the mRNA expression of appetite-related hormones [pro-melanin-concentrating hormone (pmch), hypocretin (synonym: orexin, hcrt), neuropeptide Y (npy) and cocaine- and amphetamine-regulated transcript (cart)] was assessed using quantitative real-time PCR in brain regions related to food intake regulation (telencephalon/preoptic area, optic tectum/thalamus and hypothalamus). CM inclusion diets caused decreases in both growth and food intake in Atlantic cod. Optic tectum pmch transcript expression was significantly higher in fish fed the 30% CM diet compared to fish fed the 15% CM diet. In the hypothalamus, compared to fish fed the control diet, hcrt expression was significantly higher in fish fed the 30% CM diet, while npy transcript expression was significantly higher in fish fed the 15% CM diet. cart mRNA expression was not affected by diet in any brain region. Further studies are needed to determine which factors (e.g. anti-nutritional factors, palatability and nutritional deficits) contribute to reduced feed intake and growth, as well as the maximum CM inclusion level that does not negatively influence feed intake, growth rate and the transcript expression of appetite-related factors in Atlantic cod.

  17. Effects of hypoxic exposure during feeding on SDA and postprandial cardiovascular physiology in the Atlantic cod, Gadus morhua.

    Science.gov (United States)

    Behrens, Jane W; Axelsson, Michael; Neuenfeldt, Stefan; Seth, Henrik

    2012-01-01

    Some Atlantic cod in the Bornholm Basin undertake vertical foraging migrations into severely hypoxic bottom water. Hypoxic conditions can reduce the postprandial increase in gastrointestinal blood flow (GBF). This could subsequently postpone or reduce the postprandial increase in oxygen consumption (MO(2)), i.e. the SDA, leading to a disturbed digestion. Additionally, a restricted oxygen uptake could result in an oxygen debt that needs to be compensated for upon return to normoxic waters and this may also affect the ability to process the food. Long-term cardio-respiratory measurements were made on fed G. morhua in order to understand how the cardio-respiratory system of feeding fish respond to a period of hypoxia and a subsequent return to normoxia. These were exposed to 35% water oxygen saturation for 90 minutes, equivalent to the time and oxygen level cod voluntarily endure when searching for food in the Bornholm Basin. We found that i) gastric and intestinal blood flows, cardiac output and MO(2) increased after feeding, ii) gastric and intestinal blood flows were spared in hypoxia, and iii) there were no indications of an oxygen debt at the end of the hypoxic period. The magnitude and time course of the measured variables are similar to values obtained from fish not exposed to the hypoxic period. In conclusion, when cod in the field search for and ingest prey under moderate hypoxic conditions they appear to stay within safe limits of oxygen availability as we saw no indications of an oxygen debt, or negative influence on digestive capacity, when simulating field observations.

  18. Effects of hypoxic exposure during feeding on SDA and postprandial cardiovascular physiology in the Atlantic cod, Gadus morhua.

    Directory of Open Access Journals (Sweden)

    Jane W Behrens

    Full Text Available Some Atlantic cod in the Bornholm Basin undertake vertical foraging migrations into severely hypoxic bottom water. Hypoxic conditions can reduce the postprandial increase in gastrointestinal blood flow (GBF. This could subsequently postpone or reduce the postprandial increase in oxygen consumption (MO(2, i.e. the SDA, leading to a disturbed digestion. Additionally, a restricted oxygen uptake could result in an oxygen debt that needs to be compensated for upon return to normoxic waters and this may also affect the ability to process the food. Long-term cardio-respiratory measurements were made on fed G. morhua in order to understand how the cardio-respiratory system of feeding fish respond to a period of hypoxia and a subsequent return to normoxia. These were exposed to 35% water oxygen saturation for 90 minutes, equivalent to the time and oxygen level cod voluntarily endure when searching for food in the Bornholm Basin. We found that i gastric and intestinal blood flows, cardiac output and MO(2 increased after feeding, ii gastric and intestinal blood flows were spared in hypoxia, and iii there were no indications of an oxygen debt at the end of the hypoxic period. The magnitude and time course of the measured variables are similar to values obtained from fish not exposed to the hypoxic period. In conclusion, when cod in the field search for and ingest prey under moderate hypoxic conditions they appear to stay within safe limits of oxygen availability as we saw no indications of an oxygen debt, or negative influence on digestive capacity, when simulating field observations.

  19. Infection dynamics of two renal myxozoans in hatchery reared fry and juvenile Atlantic cod Gadus morhua L.

    Science.gov (United States)

    Holzer, A S; Stewart, S; Tildesley, A; Wootten, R; Sommerville, C

    2010-09-01

    In order to study the infection dynamics of 2 renal myxozoans, Zschokkella hildae Auerbach, 1910 and Gadimyxa atlantica Køie, Karlsbakk and Nylund, 2007 in cultured Atlantic cod, Gadus morhua L. aged 3-19 months, a specific single-round PCR assay and a double-label in situ hybridization protocol were developed. The results demonstrated that the 2 myxozoans show spatial separation of their development with regard to spore formation inside the renal tubules versus the collecting ducts and ureters, as well as temporal separation with Z. hildae proliferating and developing spores only once the G. atlantica infection decreases, despite the presence of both myxozoans in the smallest fry studied. These results strongly suggest within-host competition of the 2 myxozoans with potential suppression of Z. hildae by G. atlantica until G. morhua acquires immunity against G. atlantica. The quantification of the G. atlantica infection inside the renal tubules before and after a 29-day experimental growth performance study using fry from hatcheries with differing filtration systems showed that the intensity of infection with G. atlantica seems to be controlled if prolonged exposure to the myxozoan transmission stages takes place from hatching onwards. Surprisingly, growth rates in the trial were inversely affected suggesting that G. atlantica does not negatively influence cod fry growth performance.

  20. Melanin-concentrating hormone (MCH) and gonadotropin-releasing hormones (GnRH) in Atlantic cod, Gadus morhua: tissue distributions, early ontogeny and effects of fasting.

    Science.gov (United States)

    Tuziak, Sarah M; Volkoff, Hélène

    2013-12-01

    Melanin-concentrating hormone (MCH) is classically known for its role in regulating teleost fish skin color change for environmental adaptation. Recent evidence suggests that MCH also has appetite-stimulating properties. The gonadotropin-releasing hormone (GnRH) peptide family has dual roles in endocrine control of reproduction and energy status in fish. Atlantic cod (Gadus morhua) are a commercially important aquaculture species inhabiting the shores of Atlantic Canada. In this study, we examine MCH and GnRH transcript expression profiles during early development as well as in central and peripheral tissues and quantify juvenile Atlantic cod MCH and GnRH hypothalamic mRNA expressions following food deprivation. MCH and GnRH3 cDNAs are maternally deposited into cod eggs, while MCH has variable expression throughout early development. GnRH2 and GnRH3 mRNAs "turn-on" during mid-segmentation once the brain is fully developed. For both MCH and GnRH, highest expression appears during the exogenous feeding stages, perhaps supporting their functions as appetite regulators during early development. MCH and GnRH transcripts are found in brain regions related to appetite regulation (telencephalon/preoptic area, optic tectum/thalamus, hypothalamus), as well as the pituitary gland and the stomach, suggesting a peripheral function in food intake regulation. Atlantic cod MCH mRNA is upregulated during fasting, while GnRH2 and GnRH3 transcripts do not appear to be influenced by food deprivation. In conclusion, MCH might be involved in stimulating food intake in juvenile Atlantic cod, while GnRHs may play a more significant role in appetite regulation during early development.

  1. Linking size and age at sexual maturation to body growth, productivity and recruitment of Atlantic cod stocks spanning the North Atlantic

    DEFF Research Database (Denmark)

    Köster, Fritz; Trippel, E.A.; Tomkiewicz, Jonna

    2013-01-01

    Sexual maturation patterns of 22 North Atlantic stocks of cod (Gadus morhua) were examined and related to geographical distribution area, ambient water temperature, growth and surplus production. Four patterns were identified, i.e. sexual maturation early in life at small size, early in life...... at large size, late in life at small size and lastly, late in life at large size. These maturation patterns were geographically clustered and associated with differences in growth and surplus production. Stocks maturing late in life at small size were characterised by slow growth and low surplus production...... (e.g. stocks in the Gulf of St. Lawrence, Labrador/Newfoundland). Stocks maturing early in life at large size exhibited high to intermediate growth and surplus production (e.g. Celtic Sea, North Sea). Stocks maturing late in life at large size had low to intermediate growth rates and surplus...

  2. A moderate increase in ambient temperature modulates the Atlantic cod (Gadus morhua spleen transcriptome response to intraperitoneal viral mimic injection

    Directory of Open Access Journals (Sweden)

    Hori Tiago S

    2012-08-01

    Full Text Available Abstract Background Atlantic cod (Gadus morhua reared in sea-cages can experience large variations in temperature, and these have been shown to affect their immune function. We used the new 20K Atlantic cod microarray to investigate how a water temperature change which, simulates that seen in Newfoundland during the spring-summer (i.e. from 10°C to 16°C, 1°C increase every 5 days impacted the cod spleen transcriptome response to the intraperitoneal injection of a viral mimic (polyriboinosinic polyribocytidylic acid, pIC. Results The temperature regime alone did not cause any significant increases in plasma cortisol levels and only minor changes in spleen gene transcription. However, it had a considerable impact on the fish spleen transcriptome response to pIC [290 and 339 significantly differentially expressed genes between 16°C and 10°C at 6 and 24 hours post-injection (HPI, respectively]. Seventeen microarray-identified transcripts were selected for QPCR validation based on immune-relevant functional annotations. Fifteen of these transcripts (i.e. 88%, including DHX58, STAT1, IRF7, ISG15, RSAD2 and IκBα, were shown by QPCR to be significantly induced by pIC. Conclusions The temperature increase appeared to accelerate the spleen immune transcriptome response to pIC. We found 41 and 999 genes differentially expressed between fish injected with PBS vs. pIC at 10°C and sampled at 6HPI and 24HPI, respectively. In contrast, there were 656 and 246 genes differentially expressed between fish injected with PBS vs. pIC at 16°C and sampled at 6HPI and 24HPI, respectively. Our results indicate that the modulation of mRNA expression of genes belonging to the NF-κB and type I interferon signal transduction pathways may play a role in controlling temperature-induced changes in the spleen’s transcript expression response to pIC. Moreover, interferon effector genes such as ISG15 and RSAD2 were differentially expressed between fish injected with

  3. Correlation between microbiota and growth in Mangrove Killifish (Kryptolebias marmoratus) and Atlantic cod (Gadus morhua).

    Science.gov (United States)

    Forberg, Torunn; Sjulstad, Eli Bjørnø; Bakke, Ingrid; Olsen, Yngvar; Hagiwara, Atsushi; Sakakura, Yoshitaka; Vadstein, Olav

    2016-02-15

    The vertebrate gut is host to large communities of bacteria, and one of the beneficial contributions of this commensal gut microbiota is the increased nutritional gain from feed components that the host cannot degrade on its own. Fish larvae of similar age and under the same rearing conditions often diverge with regards to growth. The underlying reasons for this could be differences in genetic background, feeding behavior or digestive capacity. Both feeding behavior and digestion can be influenced by differences in the microbiota. To investigate possible correlations between the size of fish larvae and their gut microbiota, we analyzed the microbiota small and large genetically homogenous killifish and genetically heterogeneous cod larvae by Bray-Curtis Similarity measures of 16S DNA DGGE patterns. A significant difference in richness (p = 0.037) was observed in the gut microbiota of small and large killifish, but the overall gut microbiota was not found to be significantly different (p = 0.13), indicating strong genetic host selection on microbiota composition at the time of sampling. The microbiota of small and large cod larvae was significantly different with regards to evenness and diversity (p = 0.0001), and a strong correlation between microbiota and growth was observed.

  4. Ocean warming and acidification modulate energy budget and gill ion regulatory mechanisms in Atlantic cod (Gadus morhua).

    Science.gov (United States)

    Kreiss, C M; Michael, K; Lucassen, M; Jutfelt, F; Motyka, R; Dupont, S; Pörtner, H-O

    2015-10-01

    Ocean warming and acidification are threatening marine ecosystems. In marine animals, acidification is thought to enhance ion regulatory costs and thereby baseline energy demand, while elevated temperature also increases baseline metabolic rate. Here we investigated standard metabolic rates (SMR) and plasma parameters of Atlantic cod (Gadus morhua) after 3-4 weeks of exposure to ambient and future PCO2 levels (550, 1200 and 2200 µatm) and at two temperatures (10, 18 °C). In vivo branchial ion regulatory costs were studied in isolated, perfused gill preparations. Animals reared at 18 °C responded to increasing CO2 by elevating SMR, in contrast to specimens at 10 °C. Isolated gills at 10 °C and elevated PCO2 (≥1200 µatm) displayed increased soft tissue mass, in parallel to increased gill oxygen demand, indicating an increased fraction of gill in whole animal energy budget. Altered gill size was not found at 18 °C, where a shift in the use of ion regulation mechanisms occurred towards enhanced Na(+)/H(+)-exchange and HCO3 (-) transport at high PCO2 (2200 µatm), paralleled by higher Na(+)/K(+)-ATPase activities. This shift did not affect total gill energy consumption leaving whole animal energy budget unaffected. Higher Na(+)/K(+)-ATPase activities in the warmth might have compensated for enhanced branchial permeability and led to reduced plasma Na(+) and/or Cl(-) concentrations and slightly lowered osmolalities seen at 18 °C and 550 or 2200 µatm PCO2 in vivo. Overall, the gill as a key ion regulation organ seems to be highly effective in supporting the resilience of cod to effects of ocean warming and acidification.

  5. Genomic signatures of local directional selection in a high gene flow marine organism; the Atlantic cod (Gadus morhua

    Directory of Open Access Journals (Sweden)

    Mittelholzer Christian

    2009-12-01

    Full Text Available Abstract Background Marine fishes have been shown to display low levels of genetic structuring and associated high levels of gene flow, suggesting shallow evolutionary trajectories and, possibly, limited or lacking adaptive divergence among local populations. We investigated variation in 98 gene-associated single nucleotide polymorphisms (SNPs for evidence of selection in local populations of Atlantic cod (Gadus morhua L. across the species distribution. Results Our global genome scan analysis identified eight outlier gene loci with very high statistical support, likely to be subject to directional selection in local demes, or closely linked to loci under selection. Likewise, on a regional south/north transect of central and eastern Atlantic populations, seven loci displayed strongly elevated levels of genetic differentiation. Selection patterns among populations appeared to be relatively widespread and complex, i.e. outlier loci were generally not only associated with one of a few divergent local populations. Even on a limited geographical scale between the proximate North Sea and Baltic Sea populations four loci displayed evidence of adaptive evolution. Temporal genome scan analysis applied to DNA from archived otoliths from a Faeroese population demonstrated stability of the intra-population variation over 24 years. An exploratory landscape genetic analysis was used to elucidate potential effects of the most likely environmental factors responsible for the signatures of local adaptation. We found that genetic variation at several of the outlier loci was better correlated with temperature and/or salinity conditions at spawning grounds at spawning time than with geographic distance per se. Conclusion These findings illustrate that adaptive population divergence may indeed be prevalent despite seemingly high levels of gene flow, as found in most marine fishes. Thus, results have important implications for our understanding of the interplay of

  6. The fate of Lernaeocera branchialis (L.) (Crustacea; Copepoda) in Atlantic cod, Gadus morhua L.

    Science.gov (United States)

    Baily, J E; Smith, J L; Wootten, R; Sommerville, C

    2011-02-01

    Lernaeocera branchialis, a copepod crustacean parasite of gadoids, represents a potential threat to both wild and farmed cod, Gadus morhua. The pathological changes associated with the early stages of experimental infection have previously been reported in detail, and this article describes the lesions associated with later chronic stages of experimental infection. Chronic infection is characterised by extravascular granuloma formation and proliferation of fibrovascular tissue around intact and fragmented, degenerate parasites within both the gill arch and cardiac region. The majority of parasite granulomas are located within connective tissues of the gill arch or pericardium; however, low numbers are present within the wall of large vessels. The intraluminal parasites and thrombi of early stage infection are largely absent in these later lesions. We propose that organisation and incorporation of the parasite thrombus into the vessel wall with subsequent granuloma formation and extrusion into the surrounding connective tissue leads to the elimination of the parasite from the vascular system. Thus, rather than being a negative consequence of infection thrombosis is protective, allowing the host to survive the substantial initial vascular insult.

  7. Investigation of fixed wavelength fluorescence results for biliary metabolites of polycyclic aromatic hydrocarbons formed in Atlantic cod (Gadus morhua).

    Science.gov (United States)

    Pampanin, Daniela M; Kemppainen, Eeva K; Skogland, Karianne; Jørgensen, Kåre B; Sydnes, Magne O

    2016-02-01

    Fixed wavelength fluorescence (FF) and synchronous fluorescence scanning (SFS) of fish bile are commonly used methods to analyze for exposure to polycyclic aromatic hydrocarbons (PAHs) from petrogenic and pyrogenic sources. A range of conjugated oxidation products from petrogenic PAHs are normally accumulated in the bile. Therefore their detection is important. In the present study, phenanthrene and naphthalene metabolites, formed in vivo in Atlantic cod (Gadus morhua), were used to study the response of these compounds in both FF and SFS analyses. The selected synthetic metabolites were (-)-(1R,2R)-1,2-dihydrophenanthrene-1,2-diol and (-)-(1R,2R)-1,2-dihydronaphthalene-1,2-diol. The study findings showed that the recommended excitation and emission wavelengths for FF analysis do not comprise the maximum emission wavelengths for these metabolites, providing an incorrect estimation of the PAH exposure. A method developed in our laboratory for the synthesis of (-)-(1R,2R)-1,2-dihydrophenanthrene-1,2-diol is also described.

  8. Statistical analysis of North Atlantic right whale (Eubalaena glacialis) signal trains in Cape Cod Bay, spring 2012.

    Science.gov (United States)

    Urazghildiiev, Ildar R

    2014-11-01

    Statistical characteristics of signal trains produced by North Atlantic right whales (NARW) during the winter and early spring in Cape Cod Bay, MA are described. Data analysis was based on four days of acoustic recordings that were obtained with synchronized hydrophones. Based on temporal and geographical clustering of detected signals, 7264 NARW sounds were identified and associated with 559 signal trains. The detected signals were assigned to four classes of narrowband tonal calls--upcalls, downcalls, complex, and high frequency, and two classes of wideband sounds--gunshots and complex. Empirical distributions of the number of signals in trains, total duration of trains, the positions of NARW, and signal classes are presented. Results indicate that 68.9% of all signal trains consisted of 10 or fewer signals. Low and high frequency tonals that lacked wideband sounds formed 69.1% of trains; 5.0% of trains lacked tonals. Trains consisting of only upcalls comprised 44.2% of all detected trains. Because 18.3% of trains contained no upcalls, using detectors that identify all signal classes would improve right whale detection.

  9. Probiotics-pathogen interactions elicit differential regulation of cutaneous immune responses in epidermal cells of Atlantic cod Gadus morhua.

    Science.gov (United States)

    Lazado, Carlo C; Caipang, Christopher Marlowe A

    2014-01-01

    Little is known on the cutaneous immune responses during probiotics-pathogen interactions in fish. Thus, this study employed Atlantic cod primary epidermal (EP) cell cultures as a model to understand this interaction. The probiotics-pathogen interactions in the EP cell cultures were elucidated using Vibrio anguillarum 2133 (VA) as the pathogen and two host-derived bacteria (GP21 and GP12) as the probiotics. There was a regional size difference on the EP cells; i.e., EP cells from the dorsal region were significantly larger than the EP cells at the ventral side. VA significantly decreased viability of EP cells. In the presence of probiotics, this inhibition was mitigated. The probiotics reduced VA-induced cellular apoptosis and the probiotics-pathogen interactions influenced cellular myeloperoxidase activity during the latter stage of co-incubation. The probiotics-pathogen interactions triggered differential regulation of immune-related genes and the effects of the interaction were dependent on the region where the cells were isolated and the length of the co-incubation period. In most cases, the presence of probiotics alone showed no significant change on the mRNA level of immune genes in the EP cells but triggered immunostimulatory activity when incubated with VA. This study showed that the virulence of VA in EP cells could be modulated by host-derived probiotics and the immunomodulatory characteristics of the two candidate probionts advanced their immune-related probiotic potential.

  10. Evidence of uptake, biotransformation and DNA binding of polyaromatic hydrocarbons in Atlantic cod and corkwing wrasse caught in the vicinity of an aluminium works.

    Science.gov (United States)

    Aas, E; Beyer, J; Jonsson, G; Reichert, W L; Andersen, O K

    2001-09-01

    Feral Atlantic cod (Gadus morhua) and corkwing wrasse (Symphodus melops) were investigated for polyaromatic hydrocarbon (PAH) contamination in the Karmsund strait, western Norway. This strait is highly contaminated with PAHs, and a main source is the chronic release of gas-scrubbing effluents from a local aluminium works. In both species, the level of biliary PAH metabolites and hepatic DNA adducts were higher in fish collected near the aluminium works. Interestingly, a significantly higher level of both biliary PAH metabolites and hepatic DNA adducts was found in corkwing wrasse as compared to cod, indicating a higher potential for genotoxic effects in this species. Hepatic cytochrome P4501A (CYP1A) in cod estimated by ethoxyresorufin-O-deethylase and an immunoassay technique (ELISA), seemed to be weakly induced at the contaminated sites. At the most contaminated site, skin ulcers and fin erosion were detected in about 70 and 45% of the cods, respectively. The data demonstrated that both cod and corkwing wrasse may be suitable target species for PAH pollution monitoring.

  11. Where does the cod come from? Panels of gene‐associated markers provide vastly improved origin assignment in Atlantic cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Eg Nielsen, Einar; Hansen, Jakob Hemmer; Taylor, Martin

    2012-01-01

    ‐European variation in more than 1200 gene‐associated SNPs in cod and found that levels of differentiation for a subset of 132 SNPs was best explained by a model including directional selection. These high‐differentiation SNPs were used for designing “minimum panels with maximum power” for a number of case studies...

  12. Harvest Pressure on Coastal Atlantic Cod (Gadus morhua) from Recreational Fishing Relative to Commercial Fishing Assessed from Tag-Recovery Data.

    Science.gov (United States)

    Kleiven, Alf Ring; Fernandez-Chacon, Albert; Nordahl, Jan-Harald; Moland, Even; Espeland, Sigurd Heiberg; Knutsen, Halvor; Olsen, Esben Moland

    2016-01-01

    Marine recreational fishing is a popular outdoor activity. However, knowledge about the magnitude of recreational catches relative to commercial catches in coastal fisheries is generally sparse. Coastal Atlantic cod (Gadus morhua) is a target species for recreational fishers in the North Atlantic. In Norway, recreational fishers are allowed to use a variety of traps and nets as well as long-line and rod and line when fishing for cod. From 2005 to 2013, 9729 cod (mean size: 40 cm, range: 15-93 cm) were tagged and released in coastal Skagerrak, southeast Norway. Both high-reward (NOK 500) and low-reward tags (NOK 50) were used in this study. Because some harvested fish (even those posting high-reward tags) may go unreported by fishers, reporting rates were estimated from mark-recovery models that incorporate detection parameters in their structure, in addition to survival and mortality estimates. During 2005 to 2013, a total of 1707 tagged cod were recovered and reported by fishers. We estimate the overall annual survival to be 33% (SE 1.5). Recreational rod and line fishing were responsible for 33.7% (SE 2.4) of total mortality, followed by commercial fisheries (15.1% SE 0.8) and recreational fixed gear (6.8% SE 0.4). Natural mortality was 44.4% (SE 2.5) of total mortality. Our findings suggest that recreational fishing-rod and line fishing in particular-is responsible for a substantial part of fishing mortality exerted on coastal cod in southern Norway.

  13. Harvest Pressure on Coastal Atlantic Cod (Gadus morhua from Recreational Fishing Relative to Commercial Fishing Assessed from Tag-Recovery Data.

    Directory of Open Access Journals (Sweden)

    Alf Ring Kleiven

    Full Text Available Marine recreational fishing is a popular outdoor activity. However, knowledge about the magnitude of recreational catches relative to commercial catches in coastal fisheries is generally sparse. Coastal Atlantic cod (Gadus morhua is a target species for recreational fishers in the North Atlantic. In Norway, recreational fishers are allowed to use a variety of traps and nets as well as long-line and rod and line when fishing for cod. From 2005 to 2013, 9729 cod (mean size: 40 cm, range: 15-93 cm were tagged and released in coastal Skagerrak, southeast Norway. Both high-reward (NOK 500 and low-reward tags (NOK 50 were used in this study. Because some harvested fish (even those posting high-reward tags may go unreported by fishers, reporting rates were estimated from mark-recovery models that incorporate detection parameters in their structure, in addition to survival and mortality estimates. During 2005 to 2013, a total of 1707 tagged cod were recovered and reported by fishers. We estimate the overall annual survival to be 33% (SE 1.5. Recreational rod and line fishing were responsible for 33.7% (SE 2.4 of total mortality, followed by commercial fisheries (15.1% SE 0.8 and recreational fixed gear (6.8% SE 0.4. Natural mortality was 44.4% (SE 2.5 of total mortality. Our findings suggest that recreational fishing-rod and line fishing in particular-is responsible for a substantial part of fishing mortality exerted on coastal cod in southern Norway.

  14. Biological effects of polycyclic aromatic hydrocarbons (PAH) and their first metabolic products in in vivo exposed Atlantic cod (Gadus morhua).

    Science.gov (United States)

    Pampanin, Daniela M; Le Goff, Jeremie; Skogland, Karianne; Marcucci, Cristian R; Øysæd, Kjell Birger; Lorentzen, Marianne; Jørgensen, Kåre B; Sydnes, Magne O

    2016-01-01

    The monitoring of the presence of polycyclic aromatic hydrocarbons (PAH) in the aquatic environment is a worldwide activity since some of these compounds are well-established carcinogens and mutagens. Contaminants in this class are in fact regarded as priority hazardous substances for environmental pollution (Water Framework Directive 2000/60/EC). In this study, Atlantic cod (Gadus morhua) was selected to assess in vivo effects of two PAH and their first metabolic products, namely, the corresponding trans-dihydrodiols, using biological markers. Fish were exposed for 1 wk to a single PAH (naphthalene or chrysene) and its synthetic metabolites ((1R,2R)-1,2-dihydronaphthalene-1,2-diol and (1R,2R)-1,2-dihydrochrysene-1,2-diol) by intraperitoneal injection in a continuous seawater flow system. After exposure, PAH metabolism including PAH metabolites in bile and ethoxyresorufin O-deethylase (EROD) activity, oxidative stress glutathione S-transferases (GST) and catalase (CAT) activities, and genotoxicity such as DNA adducts were evaluated, as well as general health conditions including condition index (CI), hepatosomatic index (HSI), and gonadosomatic index (GSI). PAH metabolite values were low and not significantly different when measured with the fixed-wavelength fluorescence screening method, while the gas chromatography-mass spectroscopy (GC-MS) method showed an apparent dose response in fish exposed to naphthalene. DNA adduct levels ≥0.16 × 10(-8) relative adduct level (RAL) were detected. It should be noted that 0.16 × 10(-8) RAL is considered the maximal acceptable background level for this species. The other biomarkers activities of catalase, GST, and EROD did not display a particular compound- or dose-related response. The GSI values were significantly lower in some chrysene- and in both naphthalene- and naphthalene diol-exposed groups compared to control.

  15. Discrimination between Weaned and Unweaned Atlantic Cod (Gadus morhua) in Capture-Based Aquaculture (CBA) by X-Ray Imaging and Radio-Frequency Metal Detector

    Science.gov (United States)

    Misimi, Ekrem; Martinsen, Svein; Mathiassen, John Reidar; Erikson, Ulf

    2014-01-01

    The aim of this study was to investigate the feasibility of two detection methods for use in discrimination and sorting of adult Atlantic cod (about 2 kg) in the small scale capture-based aquaculture (CBA). Presently, there is no established method for discrimination of weaned and unweaned cod in CBA. Generally, 60–70% of the wild-caught cod in the CBA are weaned into commercial dry feed. To increase profitability for the fish farmers, unweaned cod must be separated from the stock, meaning the fish must be sorted into two groups – unweaned and weaned from moist feed. The challenges with handling of large numbers of fish in cages, defined the limits of the applied technology. As a result, a working model was established, focusing on implementing different marking materials added to the fish feed, and different technology for detecting the feed presence in the fish gut. X-ray imaging in two modes (planar and dual energy band) and sensitive radio-frequency metal detection were the detection methods that were chosen for the investigations. Both methods were tested in laboratory conditions using dead fish with marked feed inserted into the gut cavity. In particular, the sensitive radio-frequency metal detection method with carbonyl powder showed very promising results in detection of marked feed. Results show also that Dual energy band X-ray imaging may have potential for prediction of fat content in the feed. Based on the investigations it can be concluded that both X-ray imaging and sensitive radio-frequency metal detector technology have the potential for detecting cod having consumed marked feed. These are all technologies that may be adapted to large scale handling of fish from fish cages. Thus, it may be possible to discriminate between unweaned and weaned cod in a large scale grading situation. Based on the results of this study, a suggestion for evaluation of concept for in-situ sorting system is presented. PMID:24743448

  16. Discrimination between weaned and unweaned Atlantic cod (Gadus morhua) in capture-based aquaculture (CBA) by X-ray imaging and radio-frequency metal detector.

    Science.gov (United States)

    Misimi, Ekrem; Martinsen, Svein; Mathiassen, John Reidar; Erikson, Ulf

    2014-01-01

    The aim of this study was to investigate the feasibility of two detection methods for use in discrimination and sorting of adult Atlantic cod (about 2 kg) in the small scale capture-based aquaculture (CBA). Presently, there is no established method for discrimination of weaned and unweaned cod in CBA. Generally, 60-70% of the wild-caught cod in the CBA are weaned into commercial dry feed. To increase profitability for the fish farmers, unweaned cod must be separated from the stock, meaning the fish must be sorted into two groups - unweaned and weaned from moist feed. The challenges with handling of large numbers of fish in cages, defined the limits of the applied technology. As a result, a working model was established, focusing on implementing different marking materials added to the fish feed, and different technology for detecting the feed presence in the fish gut. X-ray imaging in two modes (planar and dual energy band) and sensitive radio-frequency metal detection were the detection methods that were chosen for the investigations. Both methods were tested in laboratory conditions using dead fish with marked feed inserted into the gut cavity. In particular, the sensitive radio-frequency metal detection method with carbonyl powder showed very promising results in detection of marked feed. Results show also that Dual energy band X-ray imaging may have potential for prediction of fat content in the feed. Based on the investigations it can be concluded that both X-ray imaging and sensitive radio-frequency metal detector technology have the potential for detecting cod having consumed marked feed. These are all technologies that may be adapted to large scale handling of fish from fish cages. Thus, it may be possible to discriminate between unweaned and weaned cod in a large scale grading situation. Based on the results of this study, a suggestion for evaluation of concept for in-situ sorting system is presented.

  17. Discrimination between weaned and unweaned Atlantic cod (Gadus morhua in capture-based aquaculture (CBA by X-ray imaging and radio-frequency metal detector.

    Directory of Open Access Journals (Sweden)

    Ekrem Misimi

    Full Text Available The aim of this study was to investigate the feasibility of two detection methods for use in discrimination and sorting of adult Atlantic cod (about 2 kg in the small scale capture-based aquaculture (CBA. Presently, there is no established method for discrimination of weaned and unweaned cod in CBA. Generally, 60-70% of the wild-caught cod in the CBA are weaned into commercial dry feed. To increase profitability for the fish farmers, unweaned cod must be separated from the stock, meaning the fish must be sorted into two groups - unweaned and weaned from moist feed. The challenges with handling of large numbers of fish in cages, defined the limits of the applied technology. As a result, a working model was established, focusing on implementing different marking materials added to the fish feed, and different technology for detecting the feed presence in the fish gut. X-ray imaging in two modes (planar and dual energy band and sensitive radio-frequency metal detection were the detection methods that were chosen for the investigations. Both methods were tested in laboratory conditions using dead fish with marked feed inserted into the gut cavity. In particular, the sensitive radio-frequency metal detection method with carbonyl powder showed very promising results in detection of marked feed. Results show also that Dual energy band X-ray imaging may have potential for prediction of fat content in the feed. Based on the investigations it can be concluded that both X-ray imaging and sensitive radio-frequency metal detector technology have the potential for detecting cod having consumed marked feed. These are all technologies that may be adapted to large scale handling of fish from fish cages. Thus, it may be possible to discriminate between unweaned and weaned cod in a large scale grading situation. Based on the results of this study, a suggestion for evaluation of concept for in-situ sorting system is presented.

  18. Validation of reference genes for quantitative RT-qPCR studies of gene expression in Atlantic cod (Gadus morhua l. during temperature stress

    Directory of Open Access Journals (Sweden)

    Karlsen Hans E

    2011-04-01

    Full Text Available Abstract Background One important physiological response to environmental stress in animals is change in gene expression. To obtain reliable data from gene expression studies using RT-qPCR it is important to evaluate a set of possible reference genes as normalizers for expression. The expression of these candidate genes should be analyzed in the relevant tissues during normal and stressed situations. To find suitable reference genes it was crucial that the genes were stably expressed also during a situation of physiological stress. For poikilotermic animals like cod, changes in temperature are normal, but if the changes are faster than physiological compensation, the animals respond with typical stress responses. It has previously been shown that Atlantic cod show stress responses when elevation of water temperature is faster than 1 degree/day, for this reason we chose hyperthermia as stress agent for this experiment. Findings We here describe the expression of eight candidate reference genes from Atlantic cod (Gadus morhua l. and their stability during thermal stress (temperature elevation of one degree C/day for 5 days. The genes investigated were: Eukaryotic elongation factor 1 alpha, ef1a; 18s ribosomal RNA; 18s, Ubiquitin conjugate protein; ubiq, cytoskeletal beta-actin; actb, major histcompatibility complex I; MHC-I light chain, beta-2 -microglobulin; b2m, cytoskeletal alpha-tubulin; tba1c, acidic ribosomal phosphoprotein; rplp1, glucose-6-phosphate dehydrogenase; g6pd. Their expression were analyzed in 6 tissues (liver, head kidney, intestine, spleen, heart and gills from cods exposed to elevated temperature and compared to a control group. Although there were variations between tissues with respect to reference gene stability, four transcripts were more consistent than the others: ubiq, ef1a, 18s and rplp1. We therefore used these to analyze the expression of stress related genes (heat shock proteins induced during hyperthermia. We found

  19. Seasonal variation in biomarkers in blue mussel (Mytilus edulis), Icelandic scallop (Chlamys islandica) and Atlantic cod (Gadus morhua)-Implications for environmental monitoring in the Barents Sea

    Energy Technology Data Exchange (ETDEWEB)

    Nahrgang, J., E-mail: jasmine.m.nahrgang@uit.no [Akvaplan-niva, FRAM Centre, NO-9296 Tromso (Norway); Brooks, S.J. [Norwegian Institute for Water Research (NIVA), NO-0349 Oslo (Norway); Evenset, A. [Akvaplan-niva, FRAM Centre, NO-9296 Tromso (Norway); Camus, L. [Akvaplan-niva, FRAM Centre, NO-9296 Tromso (Norway); University Centre In Svalbard (UNIS), NO-9171 Longyearbyen (Norway); Jonsson, M.; Smith, T.J. [Akvaplan-niva, FRAM Centre, NO-9296 Tromso (Norway); Lukina, J. [Akvaplan-niva, FRAM Centre, NO-9296 Tromso (Norway); University of Tromso, Faculty of Biosciences, Fisheries and Economics, Department of Arctic and Marine Biosciences, NO-9037 Tromso (Norway); Frantzen, M. [Akvaplan-niva, FRAM Centre, NO-9296 Tromso (Norway); Giarratano, E. [Centro Nacional Patagonico (CENPAT-CONICET), AR-9120 Puerto Madryn (Argentina); Renaud, P.E. [Akvaplan-niva, FRAM Centre, NO-9296 Tromso (Norway); University Centre In Svalbard (UNIS), NO-9171 Longyearbyen (Norway)

    2013-02-15

    In the Barents Sea, the limited data on biological relevant indicators and their responses to various anthropogenic stressors have hindered the development of a consistent scientific basis for selecting indicator species and developing practical procedures for environmental monitoring. Accordingly, the main aim of the present study was to develop a common set of baseline values for contaminants and biomarkers in three species, and to identify their strengths and limitations in monitoring of the Barents Sea. Blue mussel (Mytilus edulis), Icelandic scallop (Chlamys islandica) and Atlantic cod (Gadus morhua) were sampled from a north Norwegian fjord in March, June, September and December 2010. Digestive glands from the bivalve species and liver from Atlantic cod were analysed for biomarkers of oxidative stress (catalase [CAT], glutathione peroxidase [GPX], glutathione-S-transferase activities [GST], lipid peroxidation as thiobarbituric reactive substances [TBARS] and total oxyradical scavenging capacity [TOSC]), biotransformation (ethoxyresorufine-O-deethylase activity [EROD]) and general stress (lysosomal membrane stability [LMS]). Concentrations of polycyclic aromatic hydrocarbons (PAHs) and metals in the bivalves and PAH metabolites in fish bile were quantified. Finally, energy reserves (total lipids, proteins and carbohydrates) and electron transport system (ETS) activity in the digestive gland of the bivalves and liver of Atlantic cod provided background information for reproductive cycle and general physiological status of the organisms. Blue mussel and Icelandic scallop showed very similar trends in biological cycle, biomarker expression and seasonality. Biomarker baselines in Atlantic cod showed weaker seasonal variability. However, important biological events may have been undetected due to the large time intervals between sampling occasions. Physiological biomarkers such as energy reserves and ETS activity were recommended as complementary parameters to the

  20. Identification of single nucleotide polymorphisms in candidate genes for growth and reproduction in a nonmodel organism; the Atlantic cod, Gadus morhua

    DEFF Research Database (Denmark)

    Hansen, Jakob Hemmer; Eg Nielsen, Einar; Meldrup, Dorte;

    2011-01-01

    polymorphisms (SNPs) and on the development of a specific genotyping assay for 30 SNPs in 18 candidate genes for growth and reproduction in Atlantic cod (Gadus morhua). These markers can be used for scanning natural populations for signatures of selection in both contemporary and archived historical samples......, for example in retrospective studies assessing the effects of environmental changes, such as increasing temperatures, and selection imposed by high fishing pressure. Furthermore, these gene markers may be of interest to aquaculture, serving as a starting point for linking phenotypic traits important...

  1. Effects of oil pollution and persistent organic pollutants (POPs) on glycerophospholipids in liver and brain of male Atlantic cod (Gadus morhua).

    Science.gov (United States)

    Bratberg, Mari; Olsvik, Pål A; Edvardsen, Rolf B; Brekken, Hans Kristian; Vadla, Reidun; Meier, Sonnich

    2013-02-01

    Fish in the North Sea are exposed to relatively high levels of halogenated compounds in addition to the pollutants released by oil production activities. In this study male Atlantic cod (Gadus morhua) were orally exposed to environmental realistic levels (low and high) of weathered crude oil and/or a mixture of POPs for 4weeks. Lipid composition in brain and in liver extracts were analysed in order to assess the effects of the various pollutants on membrane lipid composition and fatty acid profiles. Transcriptional effects in the liver were studied by microarray and quantitative real-time RT-PCR. Chemical analyses confirmed uptake of polychlorinated biphenyls (PCBs) and chlorinated pesticides, polybrominated diphenyl ethers (PBDEs) and perfluorooctanesulfonate (PFOS) in the liver and excretion of metabolites of polyaromatic hydrocarbons (PAHs) in the bile. Treatment with POPs and/or crude oil did not induce significant changes in lipid composition in cod liver. Only a few minor changes were observed in the fatty acid profile of the brain and the lipid classes in the liver. The hypothesis that pollution from oil or POPs at environmental realistic levels alters the lipid composition in marine fish was therefore not confirmed in this study. However, the transcriptional data suggest that the fish were affected by the treatment at the mRNA level. This study suggests that a combination of oil and POPs induce the CYP1a detoxification system and gives an increase in the metabolism and clearing rate of PAHs and POPs, but with no effects on membrane lipids in male Atlantic cod.

  2. Industry Based Survey (IBS) Cod

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The "Gulf of Maine Atlantic Cod Industry-Based Survey" was a collaboration of the Massachusetts Division of Marine Fisheries and the fishing industry, with support...

  3. Northeast Regional Cod Tagging Program

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Scientific justification: Canadian and US stock assessments for Atlantic cod indicate considerable fluctuation in stock abundance and recruitment over the last 20...

  4. The third serine proteinase with chymotrypsin specificity isolated from Atlantic cod (Gadus morhua) is a type-II elastase

    DEFF Research Database (Denmark)

    Asgeirsson, B; Leth-Larsen, Rikke; Thórólfsson, M;

    1998-01-01

    efficiency of elastase C. The effects of several inhibitors on cod elastase C were identical to effects on chymotrypsins variants A and B, but dissimilar when compared with porcine pancreatic elastase. On the basis of the specificity and amino acid sequence, we conclude that the enzyme under study is most...

  5. Biomarker candidate discovery in Atlantic cod (Gadus morhua) continuously exposed to North Sea produced water from egg to fry

    DEFF Research Database (Denmark)

    Bohne-Kjersem, Anneli; Bache, Nicolai; Meier, Sonnich;

    2010-01-01

    spectrometry, using a newly developed cod EST database and the NCBI database. Many of the protein changes occurred at low levels (0.01% and 0.1% PW) of exposure, indicating putative biological responses at lower levels than previously detected. Using discriminant analysis, we identified a set of protein...

  6. Preferred temperature of juvenile Atlantic cod Gadus morhua with different haemoglobin genotypes at normoxia and moderate hypoxia

    DEFF Research Database (Denmark)

    Petersen, Maria Faldborg; Steffensen, John Fleng

    2003-01-01

    in northern regions, and the HbI(1) allele dominant in warmer areas. To determine if temperature is a selective parameter in the distribution of the haemoglobin types, the preferred temperature of the homozygous genotypes HbI-1 and HbI-2 was measured. We found that HbI-2 cod preferred a temperature of 8...

  7. In vitro and ex vivo models indicate that the molecular clock in fast skeletal muscle of Atlantic cod is not autonomous.

    Science.gov (United States)

    Lazado, Carlo C; Kumaratunga, Hiruni P S; Nagasawa, Kazue; Babiak, Igor; Caipang, Christopher Marlowe A; Fernandes, Jorge M O

    2014-10-01

    The notion that the circadian rhythm is exclusively regulated by a central clock has been challenged by the discovery of peripheral oscillators. These peripheral clocks are known to have a direct influence on the biological processes in a tissue or cell. In fish, several peripheral clocks respond directly to light, thus raising the hypothesis of autonomous regulation. Several clock genes are expressed with daily rhythmicity in Atlantic cod (Gadus morhua) fast skeletal muscle. In the present study, myosatellite cell culture and short-term cultured fast skeletal muscle explant models were developed and characterized, in order to investigate the autonomy of the clock system in skeletal muscle of Atlantic cod. Myosatellite cells proliferated and differentiated in vitro, as shown by the changes in cellular and myogenic gene markers. The high expression of myogenic differentiation 1 during the early days post-isolation implied the commitment to myogenic lineage and the increasing mRNA levels of proliferating cell nuclear antigen (pcna) indicated the proliferation of the cells in vitro. Transcript levels of myogenic marker genes such as pcna and myogenin increased during 5 days in culture of skeletal muscle explants, indicating that the muscle cells were proliferating and differentiating under ex vivo conditions. Transcript levels of the clock gene aryl hydrocarbon receptor nuclear translocator-like 2 (arntl2) in myosatellite cells showed no daily oscillation regardless of photoperiod manipulation. On the other hand, mRNA levels of the clock gene circadian locomotor output cycles kaput (clock) showed circadian rhythmicity in 5-day-old skeletal muscle explant under different photoperiod regimes. The expression of arntl2, cryptochrome2 (cry2), period 2a (per2a) and nuclear receptor subfamily 1, group D, member 1 was not rhythmic in muscle explants but photoperiod manipulation had a significant effect on mRNA levels of cry2 and per2a. Taken together, the lack of rhythmicity

  8. Conditions for instant electrical stunning of farmed Atlantic cod after de-watering, maintenance of unconsciousness, effects of stress, and fillet quality — A comparison with AQUI-S™

    NARCIS (Netherlands)

    Erikson, U.; Lambooij, E.; Digre, H.; Reimert, H.G.M.; Bondø, M.; Vis, van de H.

    2012-01-01

    Electrical stunning of farmed Atlantic cod is a method used to render the fish unconscious before further processing. However, evaluations of the stunning method at plants have shown that the electrical parameters need to be optimized to achieve instant stunning and prolonged duration of unconscious

  9. Productivity patterns and abundance-area relationships in 3 marine fish species (cod,herring and haddock); meta-analyses on the effects of temperature, life-history andhabitat size across the N Atlantic

    DEFF Research Database (Denmark)

    Mantzouni, Irene; MacKenzie, Brian

    on the biological and ecological characteristics of thestocks. Our aim was to identify the patterns of the temperature, habitat size and life-historyeffects on the SR dynamics across the N Atlantic range of 3 species; cod (21 stocks), herring(16 stocks) and haddock (7 stocks). Using hierarchical, Bayesian SR models...

  10. Cortisol levels and expression of stress- and apoptotic-related genes in the embryos of Atlantic cod, Gadus morhua following exposure to air

    DEFF Research Database (Denmark)

    Marlowe, Christopher; Caipang, A.; Fagutao, Ferdinand F.;

    2015-01-01

    Embryos (morula stage) of Atlantic cod, Gadus morhua L., were collected and subjected to air exposure for 2 min. followed by recovery at ambient conditions in the rearing container. Total immunoreactive cortisol and transcription of selected stress- and apoptosis-related genes of the embryos were...... determined before the application of the stressor and at 0.5, 1 and 24 h post-exposure. There was no significant difference in the total cortisol levels of the fertilized eggs before and after handling stress. There was high expression level of hsp70 and sod before application of the stressor...... as a consequence of air exposure at a time when cortisol is not fully active...

  11. Identification of Atlantic cod (Gadus morhua), ling (Molva molva), and Alaska pollock (Gadus chalcogrammus) by PCR-ELISA using duplex PCR.

    Science.gov (United States)

    Taboada, Ledicia; Sánchez, Ana; Velasco, Amaya; Santaclara, Francisco J; Pérez-Martín, Ricardo I; Sotelo, Carmen G

    2014-06-18

    Species-specific PCR-ELISA assays for the identification of Atlantic cod (Gadus morhua), Alaska pollock (Gadus chalcogrammus), and ling (Molva molva) in food products have been developed. The method, comprising a set of primers common to the first two species, a set of primers for M. molva, and a probe for each species, was designed using ND4 and cytochrome b genes as molecular markers. The sensitivity and selectivity were then determined for each assay. These assays were afterward used to analyze DNA extracted from commercial fish products. The presence of the target species was successfully detected in all analyzed samples, demonstrating the applicability of this method to the analysis of food products.

  12. Copepods enhance nutritional status, growth and development in Atlantic cod (Gadus morhua L. larvae — can we identify the underlying factors?

    Directory of Open Access Journals (Sweden)

    Ørjan Karlsen

    2015-05-01

    Full Text Available The current commercial production protocols for Atlantic cod depend on enriched rotifers and Artemia during first-feeding, but development and growth remain inferior to fish fed natural zooplankton. Two experiments were conducted in order to identify the underlying factors for this phenomenon. In the first experiment (Exp-1, groups of cod larvae were fed either (a natural zooplankton, mainly copepods, increasing the size of prey as the larvae grew or (b enriched rotifers followed by Artemia (the intensive group. In the second experiment (Exp-2, two groups of larvae were fed as in Exp-1, while a third group was fed copepod nauplii (approximately the size of rotifers throughout the larval stage. In both experiments, growth was not significantly different between the groups during the first three weeks after hatching, but from the last part of the rotifer feeding period and onwards, the growth of the larvae fed copepods was higher than that of the intensive group. In Exp-2, the growth was similar between the two copepod groups during the expeimental period, indicating that nutrient composition, not prey size caused the better growth on copepods. Analyses of the prey showed that total fatty acid composition and the ratio of phospholipids to total lipids was slightly different in the prey organisms, and that protein, taurine, astaxanthin and zinc were lower on a dry weight basis in rotifers than in copepods. Other measured nutrients as DHA, all analysed vitamins, manganese, copper and selenium were similar or higher in the rotifers. When compared to the present knowledge on nutrient requirements, protein and taurine appeared to be the most likely limiting nutrients for growth in cod larvae fed rotifers and Artemia. Larvae fed rotifers/Artemia had a higher whole body lipid content than larvae fed copepods at the end of the experiment (stage 5 after the fish had been fed the same formulated diet for approximately 2 weeks.

  13. Pre-digestion of dietary lipids has only minor effects on absorption, retention and metabolism in larval stages of Atlantic cod (Gadus morhua).

    Science.gov (United States)

    Hamre, K; Lukram, I M; Rønnestad, I; Nordgreen, A; Saele, O

    2011-03-01

    The hypothesis of the present study was that cod larvae have a limitation in lipid digestion, and that absorption of lipids would increase by pre-hydrolysation. The diets used were designed to contain 15% lipid, of which 40% was phosphatidylcholine (PC) and 60 % was TAG. Cod larvae (40d post hatch (dph)) were fed a single meal where either PC or TAG was radioactively labelled, and the labelled PC or TAG was either intact or hydrolysed (pre-digested). The larvae were then incubated individually in chambers with collection of CO2 for 10 h. The following fractions were analysed for radioactivity: the incubation water (evacuated feed); the intestine; the body; the CO2 trap. The larvae ate a 16-29 μg diet, equivalent to 3·4-5·2 % of dry body weight. In the whole population, 0-16% of the lipid was evacuated. The larvae that had eaten less than 1·9-2·7 μg lipid absorbed close to 100% of the lipid, absorption being defined conservatively as the amount contained in the carcass and CO2, excluding the intestinal tissue. In these larvae, approximately 100 % of the absorbed lipid was also catabolised. In the larvae that ingested more than 1·9-2·7 μg lipid, there was a linear reduction in lipid absorption to a minimum of 55% at the highest lipid intakes parallel to an increasing retention of lipids in the carcass. There were only minor differences in digestion, absorption, retention and metabolism of lipids between the larvae fed the different diets, and the larvae tended to retain lipid classes as they were present in the feed. The study shows that 40-dph Atlantic cod larvae have an efficient utilisation of dietary lipids supplied as intact PC and TAG.

  14. Pituitary gonadotropin and testicular gonadotropin receptor expression in Atlantic cod (Gadusmorhua L.) during the first reproductive season: Effects of photoperiod modulation.

    Science.gov (United States)

    de Almeida, Fernanda Ferreira Loureiro; Andersson, Eva; Mittelholzer, Christian; Karlsen, Orjan; Taranger, Geir Lasse; Schulz, Rüdiger W

    2011-08-01

    Pituitary mRNA levels of gonadotropin β-subunits and of their cognate receptors in the testis were studied during puberty in Atlantic cod under normal and experimental photoperiod conditions that suppressed, delayed or accelerated testis maturation. Results are discussed in context with changes in testicular histology and plasma androgen levels, considered as end points of gonadotropic regulation. Up-regulation of fshb was closely associated with the onset of puberty, decreased when spermatogenesis was completed and reached minimum levels after spawning. These results demonstrate, for the first time using an experimental approach, that activation of Fsh-dependent signaling is associated with spermatogonial proliferation and formation of spermatogenic cysts. Changes in fshr expression were less prominent and could be explained by changes in the cellular composition and RNA content of cod testis tissue. At more advanced stages of development (spermiogenesis, spermiation and spawning), lhb and, one month later, lhcgr transcript levels increased and reached peak values in spawning fish, in a positive feedback loop involving plasma androgens and Lh/Lhcgr-dependent signaling. This loop was broken by a loss of lhb expression at the end of the spawning season. Continuous light (LL) from summer solstice, ~8 months prior to spawning, suppressed the start of testis maturation and the changes in gonadotropin and receptor mRNA levels, while LL from winter solstice initially up-regulated lhb and lhcgr expression, before resulting in a precocious termination of the spawning season and low expression of all four genes. Our studies provide experimental evidence for a clear functional discrimination of cod gonadotropins.

  15. Effect of sub-lethal exposure to ultraviolet radiation on the escape performance of Atlantic cod larvae (Gadus morhua.

    Directory of Open Access Journals (Sweden)

    Yuichi Fukunishi

    Full Text Available The amount of ultraviolet (UV radiation reaching the earth's surface has increased due to depletion of the ozone layer. Several studies have reported that UV radiation reduces survival of fish larvae. However, indirect and sub-lethal impacts of UV radiation on fish behavior have been given little consideration. We observed the escape performance of larval cod (24 dph, SL: 7.6±0.2 mm; 29 dph, SL: 8.2±0.3 mm that had been exposed to sub-lethal levels of UV radiation vs. unexposed controls. Two predators were used (in separate experiments: two-spotted goby (Gobiusculus flavescens; a suction predator and lion's mane jellyfish (Cyanea capillata; a "passive" ambush predator. Ten cod larvae were observed in the presence of a predator for 20 minutes using a digital video camera. Trials were replicated 4 times for goby and 5 times for jellyfish. Escape rate (total number of escapes/total number of attacks ×100, escape distance and the number of larvae remaining at the end of the experiment were measured. In the experiment with gobies, in the UV-treated larvae, both escape rate and escape distance (36%, 38±7.5 mm respectively were significantly lower than those of control larvae (75%, 69±4.7 mm respectively. There was a significant difference in survival as well (UV: 35%,63%. No apparent escape response was observed, and survival rate was not significantly different, between treatments (UV: 66%,74% in the experiment with jellyfish. We conclude that the effect and impact of exposure to sub-lethal levels of UV radiation on the escape performance of cod larvae depends on the type of predator. Our results also suggest that prediction of UV impacts on fish larvae based only on direct effects are underestimations.

  16. THE EFFECT OF HYPOXIA ON THE MAXIMUM MATABOLIC RATE AND SPECIFIC DYNAMIC ACTION IN ATLANTIC COD Gadus morhua

    DEFF Research Database (Denmark)

    Steffensen, John Fleng

    2010-01-01

    John Fleng Steffensen' and Anders Drud Jordan Aquaculture 2010 - San Diego - Physiological Insights Towards Improving Fish Culture. Hypoxia is an increasing problem in coastal near areas and estuaries. Hypoxia can also be a problem in aquaculture systems with a high degree of recirculating water...... and protein synthesis leading to the deposition and turnover of tissue components. Oxygen consumption of juvenile cod was measured with computerized intennittent respirometry at 10 0 C. A specially designed Plexiglas respirometer with a "chimney" in either end allowed feeding without disturbing and stressing...

  17. Adjustments of molecular key components of branchial ion and pH regulation in Atlantic cod (Gadus morhua) in response to ocean acidification and warming.

    Science.gov (United States)

    Michael, Katharina; Kreiss, Cornelia M; Hu, Marian Y; Koschnick, Nils; Bickmeyer, Ulf; Dupont, Sam; Pörtner, Hans-O; Lucassen, Magnus

    2016-03-01

    Marine teleost fish sustain compensation of extracellular pH after exposure to hypercapnia by means of efficient ion and acid-base regulation. Elevated rates of ion and acid-base regulation under hypercapnia may be stimulated further by elevated temperature. Here, we characterized the regulation of transepithelial ion transporters (NKCC1, NBC1, SLC26A6, NHE1 and 2) and ATPases (Na(+)/K(+) ATPase and V-type H(+) ATPase) in gills of Atlantic cod (Gadus morhua) after 4 weeks of exposure to ambient and future PCO2 levels (550 μatm, 1200 μatm, 2200 μatm) at optimum (10 °C) and summer maximum temperature (18 °C), respectively. Gene expression of most branchial ion transporters revealed temperature- and dose-dependent responses to elevated PCO2. Transcriptional regulation resulted in stable protein expression at 10 °C, whereas expression of most transport proteins increased at medium PCO2 and 18 °C. mRNA and protein expression of distinct ion transport proteins were closely co-regulated, substantiating cellular functional relationships. Na(+)/K(+) ATPase capacities were PCO2 independent, but increased with acclimation temperature, whereas H(+) ATPase capacities were thermally compensated but decreased at medium PCO2 and 10 °C. When functional capacities of branchial ATPases were compared with mitochondrial F1Fo ATP-synthase strong correlations of F1Fo ATP-synthase and ATPase capacities generally indicate close coordination of branchial aerobic ATP demand and supply. Our data indicate physiological plasticity in the gills of cod to adjust to a warming, acidifying ocean within limits. In light of the interacting and non-linear, dose-dependent effects of both climate factors the role of these mechanisms in shaping resilience under climate change remains to be explored.

  18. Molecular identification and transmission studies of X-cell parasites from Atlantic cod Gadus morhua (Gadiformes: Gadidae and the northern black flounder Pseudopleuronectes obscurus (Pleuronectiformes: Pleuronectidae

    Directory of Open Access Journals (Sweden)

    Watanabe K

    2011-02-01

    Full Text Available Abstract Background Epidermal pseudotumours from Hippoglossoides dubius and Acanthogobius flavimanus in Japan and gill lesions in Limanda limanda from the UK have been shown to be caused by phylogenetically related protozoan parasites, known collectively as X-cells. However, the phylogenetic position of the X-cell group is not well supported within any of the existing protozoan phyla and they are currently thought to be members of the Alveolata. Ultrastructural features of X-cells in fish pseudotumours are somewhat limited and no typical environmental stages, such as spores or flagellated cells, have been observed. The life cycles for these parasites have not been demonstrated and it remains unknown how transmission to a new host occurs. In the present study, pseudobranchial pseudotumours from Atlantic cod, Gadus morhua, in Iceland and epidermal pseudotumours from the northern black flounder, Pseudopleuronectes obscurus, in Japan were used in experimental transmission studies to establish whether direct transmission of the parasite is achievable. In addition, X-cells from Atlantic cod were sequenced to confirm whether they are phylogenetically related to other X-cells and epidermal pseudotumours from the northern black flounder were analysed to establish whether the same parasite is responsible for infecting different flatfish species in Japan. Results Phylogenetic analyses of small subunit ribosomal DNA (SSU rDNA sequence data from Atlantic cod X-cells show that they are a related parasite that occupies a basal position to the clade containing other X-cell parasites. The X-cell parasite causing epidermal pseudotumours in P. obscurus is the same parasite that causes pseudotumours in H. dubius. Direct, fish to fish, transmission of the X-cell parasites used in this study, via oral feeding or injection, was not achieved. Non-amoeboid X-cells are contained within discrete sac-like structures that are loosely attached to epidermal pseudotumours in

  19. Characterization of the fatty acyl elongase (elovl) gene family, and hepatic elovl and delta-6 fatty acyl desaturase transcript expression and fatty acid responses to diets containing camelina oil in Atlantic cod (Gadus morhua).

    Science.gov (United States)

    Xue, Xi; Feng, Charles Y; Hixson, Stefanie M; Johnstone, Kim; Anderson, Derek M; Parrish, Christopher C; Rise, Matthew L

    2014-09-01

    For aquaculture to become sustainable, there is a need to substitute fish oil [FO, rich in ω3 long chain polyunsaturated fatty acids (LC-PUFA) such as 20:5ω3 (EPA) and 22:6ω3 (DHA)] in aquafeed with plant oils such as camelina oil [CO, rich in C18 PUFA such as 18:3ω3 (ALA) and 18:2ω6 (LNA)]. The LC-PUFA are essential components in fish diets for maintaining optimal health, physiology and growth. However, most marine fish including Atlantic cod are inefficient at producing LC-PUFA from shorter chain precursors. Since elovl genes encode enzymes that play key roles in fatty acid biosynthesis, we hypothesized that they may be involved in Atlantic cod responses to diets rich in 18:3ω3 and 18:2ω6. Ten members of the cod elovl gene family were characterized at the mRNA level. RT-PCR was used to study constitutive expression of elovl transcripts in fifteen tissues. Some transcripts (e.g. elovl5) were ubiquitously expressed, while others had tissue-specific expression (e.g. elovl4a in brain and eye). Cod fed a CO-containing diet (100% CO replacement of FO and including solvent-extracted fish meal) had significantly lower weight gain, with significant up-regulation of elovl5 and fadsd6 transcripts in the liver as shown by QPCR analysis, compared with cod on a FO control diet after a 13-week trial. Multivariate statistical analyses (SIMPER and PCA) indicated that high 18:3ω3 and/or low ω3 LC-PUFA levels in the liver were associated with the up-regulation of elovl5 and fadsd6, which are involved in LC-PUFA biosynthesis in cod.

  20. Discovery of miRNAs and Their Corresponding miRNA Genes in Atlantic Cod (Gadus morhua: Use of Stable miRNAs as Reference Genes Reveals Subgroups of miRNAs That Are Highly Expressed in Particular Organs.

    Directory of Open Access Journals (Sweden)

    Rune Andreassen

    Full Text Available Atlantic cod (Gadus morhua is among the economically most important species in the northern Atlantic Ocean and a model species for studying development of the immune system in vertebrates. MicroRNAs (miRNAs are an abundant class of small RNA molecules that regulate fundamental biological processes at the post-transcriptional level. Detailed knowledge about a species miRNA repertoire is necessary to study how the miRNA transcriptome modulate gene expression. We have therefore discovered and characterized mature miRNAs and their corresponding miRNA genes in Atlantic cod. We have also performed a validation study to identify suitable reference genes for RT-qPCR analysis of miRNA expression in Atlantic cod. Finally, we utilized the newly characterized miRNA repertoire and the dedicated RT-qPCR method to reveal miRNAs that are highly expressed in certain organs.The discovery analysis revealed 490 mature miRNAs (401 unique sequences along with precursor sequences and genomic location of the miRNA genes. Twenty six of these were novel miRNA genes. Validation studies ranked gmo-miR-17-1-5p or the two-gene combination gmo-miR25-3p and gmo-miR210-5p as most suitable qPCR reference genes. Analysis by RT-qPCR revealed 45 miRNAs with significantly higher expression in tissues from one or a few organs. Comparisons to other vertebrates indicate that some of these miRNAs may regulate processes like growth, lipid metabolism, immune response to microbial infections and scar damage repair. Three teleost-specific and three novel Atlantic cod miRNAs were among the differentially expressed miRNAs.The number of known mature miRNAs was considerably increased by our identification of miRNAs and miRNA genes in Atlantic cod. This will benefit further functional studies of miRNA expression using deep sequencing methods. The validation study showed that stable miRNAs are suitable reference genes for RT-qPCR analysis of miRNA expression. Applying RT-qPCR we have identified

  1. Piscidin-1-analogs with double L- and D-lysine residues exhibited different conformations in lipopolysaccharide but comparable anti-endotoxin activities

    Science.gov (United States)

    Kumar, Amit; Mahajan, Mukesh; Awasthi, Bhanupriya; Tandon, Anshika; Harioudh, Munesh Kumar; Shree, Sonal; Singh, Pratiksha; Shukla, Praveen Kumar; Ramachandran, Ravishankar; Mitra, Kalyan; Bhattacharjya, Surajit; Ghosh, Jimut Kanti

    2017-01-01

    To become clinically effective, antimicrobial peptides (AMPs) should be non-cytotoxic to host cells. Piscidins are a group of fish-derived AMPs with potent antimicrobial and antiendotoxin activities but limited by extreme cytotoxicity. We conjectured that introduction of cationic residue(s) at the interface of polar and non-polar faces of piscidins may control their insertion into hydrophobic mammalian cell membrane and thereby reducing cytotoxicity. We have designed several novel analogs of piscidin-1 by substituting threonine residue(s) with L and D-lysine residue(s). L/D-lysine-substituted analogs showed significantly reduced cytotoxicity but exhibited either higher or comparable antibacterial activity akin to piscidin-1. Piscidin-1-analogs demonstrated higher efficacy than piscidin-1 in inhibiting lipopolysaccharide (LPS)-induced pro-inflammatory responses in THP-1 cells. T15,21K-piscidin-1 (0.5 mg/Kg) and T15,21dK-piscidin-1 (1.0 mg/Kg) demonstrated 100% survival of LPS (12.0 mg/Kg)-administered mice. High resolution NMR studies revealed that both piscidin-1 and T15,21K-piscidin-1 adopted helical structures, with latter showing a shorter helix, higher amphipathicity and cationic residues placed at optimal distances to form ionic/hydrogen bond with lipid A of LPS. Remarkably, T15,21dK-piscidin-1 showed a helix-loop-helix structure in LPS and its interactions with LPS could be sustained by the distance of separation of side chains of R7 and D-Lys-15 which is close to the inter-phosphate distance of lipid A. PMID:28051162

  2. Genomic signatures of local directional selection in a high gene flow marine organism, the Atlantic cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Eg Nielsen, Einar; Hansen, Jakob Hemmer; Poulsen, Nina Aagaard;

    2009-01-01

    Background: Marine fishes have been shown to display low levels of genetic structuring and associated high levels of gene flow, suggesting shallow evolutionary trajectories and, possibly, limited or lacking adaptive divergence among local populations. We investigated variation in 98 gene...... selection in local demes, or closely linked to loci under selection. Likewise, on a regional south/north transect of central and eastern Atlantic populations, seven loci displayed strongly elevated levels of genetic differentiation. Selection patterns among populations appeared to be relatively widespread...... archived otoliths from a Faeroese population demonstrated stability of the intra-population variation over 24 years. An exploratory landscape genetic analysis was used to elucidate potential effects of the most likely environmental factors responsible for the signatures of local adaptation. We found...

  3. Optimized conditions for primary culture of pituitary cells from the Atlantic cod (Gadus morhua). The importance of osmolality, pCO₂, and pH.

    Science.gov (United States)

    Hodne, Kjetil; von Krogh, Kristine; Weltzien, Finn-Arne; Sand, Olav; Haug, Trude M

    2012-09-01

    Protocols for primary cultures of teleost cells are commonly only moderately adjusted from similar protocols for mammalian cells, the main adjustment often being of temperature. Because aquatic habitats are in general colder than mammalian body temperatures and teleosts have gills in direct contact with water, pH and buffer capacity of blood and extracellular fluid are different in fish and mammals. Plasma osmolality is generally higher in marine teleosts than in mammals. Using Atlantic cod (Gadus morhua) as a model, we have optimized these physiological parameters to maintain primary pituitary cells in culture for an extended period without loosing key properties. L-15 medium with adjusted osmolality, adapted to low pCO(2) (3.8mm Hg) and temperature (12°C), and with pH 7.85, maintained the cells in a physiologically sounder state than traditional culture medium, significantly improving cell viability compared to the initial protocol. In the optimized culture medium, resting membrane potential and response to releasing hormone were stable for at least two weeks, and the proportion of cells firing action potentials during spawning season was about seven times higher than in the original culture medium. The cells were moderately more viable when the modified medium was supplemented with newborn calf serum or artificial serum substitute. Compared to serum-free L-15 medium, expression of key genes (lhb, fshb, and gnrhr2a) was better maintained in medium containing SSR, whereas NCS tended to decrease the expression level. Although serum-free medium is adequate for many applications, serum supplement may be preferable for experiments dependent on membrane integrity.

  4. Differential impacts of elevated CO2 and acidosis on the energy budget of gill and liver cells from Atlantic cod, Gadus morhua.

    Science.gov (United States)

    Stapp, L S; Kreiss, C M; Pörtner, H O; Lannig, G

    2015-09-01

    Ocean acidification impacts fish and other marine species through increased seawater PCO2 levels (hypercapnia). Knowledge of the physiological mechanisms mediating effects in various tissues of fish is incomplete. Here we tested the effects of extracellular hypercapnia and acidosis on energy metabolism of gill and liver cells of Atlantic cod. Exposure media mimicked blood conditions in vivo, either during normo- or hypercapnia and at control or acidic extracellular pH (pHe). We determined metabolic rate and energy expenditure for protein biosynthesis, Na(+)/K(+)-ATPase and H(+)-ATPase and considered nutrition status by measurements of metabolic rate and protein biosynthesis in media with and without free amino acids (FAA). Addition of FAA stimulated hepatic but not branchial oxygen consumption. Normo- and hypercapnic acidosis as well as hypercapnia at control pHe depressed metabolic stimulation of hepatocytes. In gill cells, acidosis depressed respiration independent of PCO2 and FAA levels. For both cell types, depressed respiration was not correlated with the same reduction in energy allocated to protein biosynthesis or Na(+)/K(+)-ATPase. Hepatic energy expenditure for protein synthesis and Na(+)/K(+)-ATPase was even elevated at acidic compared to control pHe suggesting increased costs for ion regulation and cellular reorganization. Hypercapnia at control pHe strongly reduced oxygen demand of branchial Na(+)/K(+)-ATPase with a similar trend for H(+)-ATPase. We conclude that extracellular acidosis triggers metabolic depression in gill and metabolically stimulated liver cells. Additionally, hypercapnia itself seems to limit capacities for metabolic usage of amino acids in liver cells while it decreases the use and costs of ion regulatory ATPases in gill cells.

  5. Understanding the release efficiency of Atlantic cod (Gadus morhua) from trawls with a square mesh panel: effects of panel area, panel position, and stimulation of escape response

    DEFF Research Database (Denmark)

    Herrmann, Bent; Wienbeck, Harald; Karlsen, Junita Diana

    2015-01-01

    Based on size selectivity data for more than 25 000 cod (Gadus morhua) collected during experimental trawl fishing with six different codends, all of which included a square mesh panel,we investigated the effect on cod-release efficiency based on the size of the square mesh panel area, position...... of the square mesh panel, and stimulation of the escape response. Based on the results, we were able to explain why the BACOMAcodend, applied in the Baltic Sea cod directed trawl fishery, releases juvenile cod efficiently, whereas other designs, including a squaremesh panel with similar mesh size, are less...... efficient. Our main findings reveal that the release efficiency of the square mesh panel in the BACOMA codend depends largely on the overlap of the square mesh panel and the catch-accumulation zone in the codend, where cod do not have the option of just drifting further back in the trawl when proximate...

  6. Electrotransfer of the tilapia piscidin 3 and tilapia piscidin 4 genes into skeletal muscle enhances the antibacterial and immunomodulatory functions of Oreochromis niloticus.

    Science.gov (United States)

    Lin, Wen-Chun; Chang, Hsiao-Yun; Chen, Jyh-Yih

    2016-03-01

    Tilapia piscidin 3 (TP3) and tilapia piscidin 4 (TP4) are antimicrobial peptides recently isolated from Oreochromis niloticus. We previously showed that synthetic TP3 and TP4 possessed antimicrobial activities. Here, we analyzed the bactericidal abilities and immunomodulatory properties of these AMPs following the electroporation of pCMV-GFP-TP3 or pCMV-GFP-TP4 plasmid into tilapia (O. niloticus) muscle and subsequent infection with Vibrio vulnificus or Streptococcus agalactiae. Prior overexpression of TP3 or TP4 in tilapia muscle tissues efficiently reduced bacterial numbers at 24 and 48 h after V. vulnificus infection and reduced bacterial numbers at 24 h after S. agalactiae infection compared to numbers in controls expressing pCMV-GFP (EGFP). Electroporation of pCMV-EGFP-TP3 (TP3) or pCMV-EGFP-TP4 (TP4) significantly increased expression of several immune-related genes in muscle (IL-1β (12 h, TP3), IL-8 (12 h, TP3), TGFβ (3 h, TP4), and IκB (48 h, TP3, TP4)) and decreased the expression of TLR5 (12 h and 24 h, TP3) after V. vulnificus infection. Following S. agalactiae infection, expression of the following genes was significantly decreased in muscle: IL-1β (12 h, TP3), IL-8 (12 h, TP3, TP4), TLR5 (3 h-24 h, TP3, TP4), TGFβ (3 h, TP4; 24 h, TP3, TP4), and IκB (3 h, TP3). These data suggest that TP3 and TP4 exert antimicrobial effects after overexpression in the O. niloticus muscle, and also play important roles in the regulation of immune-related gene expression.

  7. Heat-shock responsive genes identified and validated in Atlantic cod (Gadus morhua liver, head kidney and skeletal muscle using genomic techniques

    Directory of Open Access Journals (Sweden)

    Kimball Jennifer

    2010-01-01

    Full Text Available Abstract Background Daily and seasonal changes in temperature are challenges that fish within aquaculture settings cannot completely avoid, and are known to elicit complex organismal and cellular stress responses. We conducted a large-scale gene discovery and transcript expression study in order to better understand the genes that are potentially involved in the physiological and cellular aspects of stress caused by heat-shock. We used suppression subtractive hybridization (SSH cDNA library construction and characterization to identify transcripts that were dysregulated by heat-shock in liver, skeletal muscle and head kidney of Atlantic cod. These tissues were selected due to their roles in metabolic regulation, locomotion and growth, and immune function, respectively. Fish were exposed for 3 hours to an 8°C elevation in temperature, and then allowed to recover for 24 hours at the original temperature (i.e. 10°C. Tissue samples obtained before heat-shock (BHS, at the cessation of heat-shock (CS, and 3, 12, and 24 hours after the cessation of heat-shock (ACS, were used for reciprocal SSH library construction and quantitative reverse transcription - polymerase chain reaction (QPCR analysis of gene expression using samples from a group that was transferred but not heat-shocked (CT as controls. Results We sequenced and characterized 4394 ESTs (1524 from liver, 1451 from head kidney and 1419 from skeletal muscle from three "forward subtracted" libraries (enriched for genes up-regulated by heat-shock and 1586 from the liver "reverse subtracted" library (enriched for genes down-regulated by heat-shock, for a total of 5980 ESTs. Several cDNAs encoding putative chaperones belonging to the heat-shock protein (HSP family were found in these libraries, and "protein folding" was among the gene ontology (GO terms with the highest proportion in the libraries. QPCR analysis of HSP90α and HSP70-1 (synonym: HSPA1A mRNA expression showed significant up

  8. Rapid, economical single-nucleotide polymorphism and microsatellite discovery based on de novo assembly of a reduced representation genome in a non-model organism: a case study of Atlantic cod Gadus morhua.

    Science.gov (United States)

    Carlsson, J; Gauthier, D T; Carlsson, J E L; Coughlan, J P; Dillane, E; Fitzgerald, R D; Keating, U; McGinnity, P; Mirimin, L; Cross, T F

    2013-03-01

    By combining next-generation sequencing technology (454) and reduced representation library (RRL) construction, the rapid and economical isolation of over 25 000 potential single-nucleotide polymorphisms (SNP) and >6000 putative microsatellite loci from c. 2% of the genome of the non-model teleost, Atlantic cod Gadus morhua from the Celtic Sea, south of Ireland, was demonstrated. A small-scale validation of markers indicated that 80% (11 of 14) of SNP loci and 40% (6 of 15) of the microsatellite loci could be amplified and showed variability. The results clearly show that small-scale next-generation sequencing of RRL genomes is an economical and rapid approach for simultaneous SNP and microsatellite discovery that is applicable to any species. The low cost and relatively small investment in time allows for positive exploitation of ascertainment bias to design markers applicable to specific populations and study questions.

  9. ¹H, ¹³C and ¹⁵N resonance assignments and second structure information of Gad m 1: a β-parvalbumin allergen from Atlantic cod (Gadus morhua).

    Science.gov (United States)

    Moraes, A H; Ackerbauer, D; Kostadinova, M; Bublin, M; Ferreira, F; Almeida, F C L; Breiteneder, H; Valente, A P

    2013-10-01

    Gad m 1 is the major allergen from Atlantic cod. It belongs to β-parvalbumin protein family and is characterized by the presence of two calcium-binding sites so called EF-hand motifs. β-Parvalbumins such as Gad m 1 are the most important fish allergens and their high cross-reactivity is the cause of the observed polysensitization to various fish species in allergic patients. Despite extensive efforts, the complete elucidation of β-parvalbumin-IgE complexes has not been achieved yet. Allergen structural studies are essential for the development of novel immunotherapy strategies, including vaccination with hypoallergenic derivatives and chimeric molecules. Here, we report for the first time the NMR study of a β-parvalbumin: Gad m 1. This report includes: (1)H, (13)C and (15)N resonance assignments of Gad m 1 as well as the second structure information based on the (13)C chemical shifts.

  10. Response of branchial Na(+)/K(+) ATPase to changes in ambient temperature in Atlantic cod (Gadus morhua) and whiting (Merlangius merlangus).

    Science.gov (United States)

    Michael, Katharina; Koschnick, Nils; Pörtner, Hans-O; Lucassen, Magnus

    2016-05-01

    The maintenance of ion and pH homeostasis despite changes in ambient temperature is crucial for ectothermic organisms. Thermal sensitivity of Na(+)/K(+) ATPase mRNA expression, protein expression and activity was determined in gills of North Sea cod (NC) and Northeastern Arctic cod (NEAC), acclimated for 6 weeks at 4 and 10 °C and compared to field samples of North Sea cod (sNC), acclimatized to early spring (4 °C) and summer (18 °C) conditions. The same analyses were conducted in gills of the confamiliar whiting, acclimated at 4 and 10 °C. Branchial Na(+)/K(+) ATPase capacities remained uncompensated at functional and protein levels in NC and NEAC at both acclimation temperatures. Na(+)/K(+) ATPase mRNA expression in NEAC acclimated at 10 °C was about twofold higher compared to NC, indicating some population-specific differentiation at this level. Lower Na(+)/K(+) ATPase capacities in gills of warm-acclimatized sNC at common assay temperatures indicate thermal compensation between seasonal extremes, and post-translational modifications contributed to this mitigation at high assay temperature. Together, cod compensates Na(+)/K(+) ATPase capacities on the warm edge of the thermal window and below 4 °C, respectively. In contrast, whiting Na(+)/K(+) ATPase capacities were cold compensated at 4 °C, supported by 1.5-fold higher mRNA and protein expression. Besides, capacities were lower in whiting compared to NC and NEAC at optimum temperature, which may be advantageous in terms of reduced maintenance cost, but at temperatures ≤4 °C, compensation may represent an energy trade-off to maintain homeostasis. The species-specific response of gadid Na(+)/K(+) ATPase indicates certain threshold temperatures beyond which compensation of the pump is elicited, possibly related to the different biogeography of these species.

  11. Recent trends in the abundance of plaice Pleuronectes platessa and cod Gadus morhua in shallow coastal waters of the Northeastern Atlantic continental shelf – a review

    DEFF Research Database (Denmark)

    Dutz, Jörg; Støttrup, Josianne Gatt; Stenberg, Claus

    2016-01-01

    responsible for any trends. At present, only a few studies exist on the trends of abundance of plaice or cod, namely from the Bay of Biscay, the North Sea and the Skagerrak/Kattegat. They suggest a declining abundance in coastal, shallow areas and – at least for plaice – a latitudinal gradient with an erosion...... of juveniles and adult fish to increasing seawater temperature are the main hypotheses for changes in distribution and abundance of both fish species in the North Sea/Bay of Biscay. However, temperature alone cannot explain the observed decline of fish in coastal areas, and the causes may be more complex...

  12. Understanding climate impacts on recruitment and spatial dynamics of Atlantic cod in the Gulf of Maine: Integration of observations and modeling

    Science.gov (United States)

    Runge, Jeffrey A.; Kovach, Adrienne I.; Churchill, James H.; Kerr, Lisa A.; Morrison, John R.; Beardsley, Robert C.; Berlinsky, David L.; Chen, Changsheng; Cadrin, Steven X.; Davis, Cabell S.; Ford, Kathryn H.; Grabowski, Jonathan H.; Howell, W. Huntting; Ji, Rubao; Jones, Rebecca J.; Pershing, Andrew J.; Record, Nicholas R.; Thomas, Andrew C.; Sherwood, Graham D.; Tallack, Shelly M. L.; Townsend, David W.

    2010-10-01

    We put forward a combined observing and modeling strategy for evaluating effects of environmental forcing on the dynamics of spatially structured cod populations spawning in the western Gulf of Maine. Recent work indicates at least two genetically differentiated complexes in this region: a late spring spawning, coastal population centered in Ipswich Bay, and a population that spawns in winter inshore and on nearshore banks in the Gulf of Maine and off southern New England. The two populations likely differ in trophic interactions and in physiological and behavioral responses to different winter and spring environments. Coupled physical-biological modeling has advanced to the point where within-decade forecasting of environmental conditions for recruitment to each of the two populations is feasible. However, the modeling needs to be supported by hydrographic, primary production and zooplankton data collected by buoys, and by data from remote sensing and fixed station sampling. Forecasts of environmentally driven dispersal and growth of planktonic early life stages, combined with an understanding of possible population-specific predator fields, usage of coastal habitat by juveniles and adult resident and migratory patterns, can be used to develop scenarios for spatially explicit population responses to multiple forcings, including climate change, anthropogenic impacts on nearshore juvenile habitat, connectivity among populations and management interventions such as regional fisheries closures.

  13. Type of carbohydrate in feed affects the expression of small leucine-rich proteoglycans (SLRPs), glycosaminoglycans (GAGs) and interleukins in skeletal muscle of Atlantic cod (Gadus morhua L.).

    Science.gov (United States)

    Tingbø, M G; Pedersen, M E; Grøndahl, F; Kolset, S O; Veiseth-Kent, E; Enersen, G; Hannesson, K O

    2012-09-01

    Aquaculture requires feed that ensures rapid growth and healthy fish. Higher inclusion of plant ingredients is desirable, as marine resources are limited. In this study we investigated the effects of higher starch inclusion in feed on muscular extracellular matrix and interleukin expression in farmed cod. Starch was replaced by complex fibers in the low-starch diet to keep total carbohydrate inclusion similar. Blood glucose and fructosamine levels were elevated in the high-starch group. The group fed a high-starch diet showed up-regulation on mRNA level of proteoglycans biglycan and decorin. ELISA confirmed the real-time PCR results on protein level for biglycan and also showed increase of lumican. For decorin the protein levels were decreased in the high-starch group, in contrast to real-time PCR results. Disaccharide analyses using HPLC showed reduction of glycosaminoglycans. Further, there was up-regulation of interleukin-1β and -10 on mRNA level in muscle. This study shows that the muscular extracellular matrix composition is affected by diet, and that a high-starch diet results in increased expression of pro-inflammatory genes similar to diabetes in humans.

  14. Puberty in male atlantic cod (Gadus morhua)

    NARCIS (Netherlands)

    Almeida, F.F.L.

    2009-01-01

    Puberty is the process by which a juvenile acquires for the first time the capacity to reproduce sexually, a critical basis for the conservation of a species. In general, the biological processes constituting the first gonadal maturation and the mechanisms involved in this process are similar among

  15. “Specificity Determinants” Improve Therapeutic Indices of Two Antimicrobial Peptides Piscidin 1 and Dermaseptin S4 Against the Gram-negative Pathogens Acinetobacter baumannii and Pseudomonas aeruginosa

    Directory of Open Access Journals (Sweden)

    Ziqing Jiang

    2014-03-01

    Full Text Available A new class of antimicrobial agents with lower rates of resistance and different targets is urgently needed because of the rapidly increasing resistance to classical antibiotics. Amphipathic cationic α-helical antimicrobial peptides (AMPs represent such a class of compounds. In our previous studies, using a 26-residue de novo designed antimicrobial peptide, we proposed the concept of “specificity determinant(s”: positively charged residue(s in the center of the non-polar face of AMPs that could decrease hemolytic activity/toxicity but increase or maintain the same level of antimicrobial activity to increase dramatically the therapeutic index. In the current study, we used d-enantiomers of two AMPs, Piscidin 1 isolated from fish and dermaseptin S4 isolated from frog. We substituted different positions in the center of the hydrophobic face with one or two lysine residue(s (one or two “specificity determinant(s”. This simple modification not only maintained or improved antimicrobial activity against Gram-negative pathogens Acinetobacter baumannii (11 strains and Pseudomonas aeruginosa (6 strains, but also dramatically decreased hemolytic activity of human red blood cells, as predicted. Therapeutic indices improved by 55-fold and 730-fold for piscidin 1 (I9K and dermaseptin S4 (L7K, A14K, respectively, against A. baumannii. Similarly, the therapeutic indices improved 32-fold and 980-fold for piscidin 1 (I9K and dermaseptin S4 (L7K, A14K, respectively, against P. aeruginosa.

  16. Hazard Analysis and identification of Critical Control Points of collagen extraction from cod by-products

    NARCIS (Netherlands)

    Aalberts, C.H.J.

    2004-01-01

    The aim of the European research project “UTILISATION AND STABILISATION OF BY-PRODUCTS FROM COD SPECIES” (QLK1-CT-2000-01017 QLRT-2001-02829) is to investigate whether collagen from fish by-products could serve as an important raw material in high quality food. Since Atlantic cod is a major commodit

  17. Feeding opportunities of larval and juvenile cod (Gadus morhua) in a Greenlandic fjord: temporal and spatial linkages between cod and their preferred prey

    DEFF Research Database (Denmark)

    Swalethorp, Rasmus; Kjellerup, Sanne; Malanski, Evandro;

    2014-01-01

    preferences of the early-life stages of Atlantic cod (Gadus morhua) to quantify the availability of prey during a spring-summer season in a West Greenlandic fjord. We hypothesized that abundances of larval and juvenile cod at size were synchronized to optimal availability of preferred prey in space and time....... The present analysis is based on nine cruises each covering 5 stations visited between 24 May and 5 August 2010 comparing zooplankton abundance, cod gut content and distribution patterns. Cod 4–25 mm in length preferred prey of about 5 % of their own length. During ontogeny, their preferences changed from...

  18. Regime shifts, resilience and recovery of a cod stock

    DEFF Research Database (Denmark)

    Lindegren, Martin; Diekmann, Rabea; Möllmann, Christian

    2010-01-01

    In the North and Baltic seas Atlantic cod Gadus morhua stocks collapsed as part or one of the major factors inducing large-scale ecosystem regime shifts. Determining the relative contribution of overfishing and climate variability in causing these shifts has proven difficult. While facing similar...

  19. Cod reproductive ecology

    DEFF Research Database (Denmark)

    Røjbek, Maria

    In recent decades, Baltic cod has experienced a period of low recruitment. In the same period the pelagic Baltic Sea ecosystem experienced a regime shift, due to hydrographic changes, affecting all trophic levels. The rationale for the thesis is built on the hypothesis that the regime shift has r...

  20. Infection of North Sea cod (Gadus morhua L.) postlarvae and juveniles with the parasites Hysterothylacium aduncum Rudolphi and Caligus sp

    DEFF Research Database (Denmark)

    Mehrdana, F.; Bahlool, Q. M.; Skovgaard, A.;

    Parasitic infections of individual juvenile and adult Atlantic cod (Gadus morhua L.) have been well studied for decades, but infections of early life stages and the impact of parasitism on population level have been less well elucidated. It is generally assumed that early developmental stages...... of fish are more vulnerable to infection compared to older age groups, but merely few investigations on parasitic infections in young cod are available. We have therefore performed a parasitological investigation of a total of 3361 specimens of Atlantic cod post larvae and juveniles sampled from the North...

  1. Acoustically Induced Streaming Flows near a Model Cod Otolith and their Potential Implications for Fish Hearing

    Energy Technology Data Exchange (ETDEWEB)

    Kotas, Charlotte W [ORNL; Rogers, Peter [Georgia Institute of Technology; Yoda, Minami [Georgia Institute of Technology

    2011-01-01

    The ears of fishes are remarkable sensors for the small acoustic disturbances associated with underwater sound. For example, each ear of the Atlantic cod (Gadus morhua) has three dense bony bodies (otoliths) surrounded by fluid and tissue, and detects sounds at frequencies from 30 to 500 Hz. Atlantic cod have also been shown to localize sounds. However, how their ears perform these functions is not fully understood. Steady streaming, or time-independent, flows near a 350% scale model Atlantic cod otolith immersed in a viscous fluid were studied to determine if these fluid flows contain acoustically relevant information that could be detected by the ear s sensory hair cells. The otolith was oscillated sinusoidally at various orientations at frequencies of 8 24 Hz, corresponding to an actual frequency range of 280 830 Hz. Phaselocked particle pathline visualizations of the resulting flows give velocity, vorticity, and rate of strain fields over a single plane of this mainly two-dimensional flow. Although the streaming flows contain acoustically relevant information, the displacements due to these flows are likely too small to explain Atlantic cod hearing abilities near threshold. The results, however, may suggest a possible mechanism for detection of ultrasound in some fish species.

  2. Cloning of antimicrobial piscidin-like peptide and prokaryotic expressionof the putative mature peptide in Epinephelus fuscoguttatus%棕点石斑鱼Piscidin样肽基因的克隆及其成熟肽的原核表达

    Institute of Scientific and Technical Information of China (English)

    陈大玮; 邓利; 何凡; 邱聪龄; 马一见; 刘志刚

    2011-01-01

    A 388bp cDNA sequence with complete open reading frame was amplified by RT-PCR with degenerate primers from leucocytes of Epinephelus fuscoguttatus, an important commercial marine fish species. Blast analysis preliminarily suggested that the obtained sequence, which was named as Epinephelus fuscoguttatus piscidin-like peptide (GU592793), is a member of fish antimicrobial peptide piscidin family. The deduced amino acid sequence was found to have the common features for defining the fish piscidin, including: (1) signal peptide sequence had 60%~95//6 similarity to oth er piscidins; (2) six amino acid residues in N-terminal part of the putative mature peptide are rich in I soleucine, phenylalanine, and histidine; (3) the amino acid residues both at position 8 and 13 of the mature peptide are glycines. The phylogenetic neighbor-joining tree showed that the present sequence cluster within the clade of piscidin-like peptide of Epinephelus akaara and Epinephelus coioides (ACE78290, ACE78291) with 81% bootstrap support. Accordingly, the first piscidin precursor cD-NA from Epinephelus fuscoguttatus was amplified and reported here. The present putative mature peptide is an amphiphilic and cationic peptide with the calculated isoelectric points of 12. 48. A Schiffer-Edmunson plot suggested the peptide had the potential to form an amphipathic orhelix. The prokaryotic fusion expression vector of predicted mature peptide (pET-32a-pis(EF)) was constructed and expressed in E. Coli Origami (DE3). The fusion protein containing the present mature peptide was efficiently expressed in the form of inclusion body after lmmol/ml IPTG induction at 30 ℃ for 4h. KEY WORDS Antimicrobial peptide Piscidin Molecular cloning%以简并引物通过RT-PCR从重要经济海水鱼类棕点石斑鱼Epinephelus uscoguttatus白细胞中扩增出一条388bp具有完整编码框的cDNA序列.Blast分析初步显示,该序列属于鱼类抗菌肽Piscidin家族的一员,将其命

  3. TaqMan DNA technology confirms likely overestimation of cod (Gadus morhua L.) egg abundance in the Irish Sea: implications for the assessment of the cod stock and mapping of spawning areas using egg-based methods.

    Science.gov (United States)

    Fox, C J; Taylor, M I; Pereyra, R; Villasana, M I; Rico, C

    2005-03-01

    Recent substantial declines in northeastern Atlantic cod stocks necessitate improved biological knowledge and the development of techniques to complement standard stock assessment methods (which largely depend on accurate commercial catch data). In 2003, an ichthyoplankton survey was undertaken in the Irish Sea and subsamples of 'cod-like' eggs were analysed using a TaqMan multiplex, PCR (polymerase chain reaction) assay (with specific probes for cod, haddock and whiting). The TaqMan method was readily applied to the large number of samples (n = 2770) generated during the survey and when combined with a manual DNA extraction protocol had a low failure rate of 6%. Of the early stage 'cod-like' eggs (1.2-1.75 mm diameter) positively identified: 34% were cod, 8% haddock and 58% whiting. As previous stock estimates based on egg surveys for Irish Sea cod assumed that the majority of 'cod-like' eggs were from cod, the TaqMan results confirm that there was probably substantial contamination by eggs of whiting and haddock that would have inflated estimates of the stock biomass.

  4. Honey, I cooled the cods: Modelling the effect of temperature on the structure of Boreal/Arctic fish ecosystems

    NARCIS (Netherlands)

    Pope, J.G.; Falk-Pedersen, J.; Jennings, S.; Rice, J.C.; Gislason, H.; Daan, N.

    2009-01-01

    Historically colder regions of the North Atlantic had fisheries dominated by only a few fish species; principally cod and capelin. Possible population dynamic mechanisms that lead to such dominance are investigated by considering how a charmingly simple published multispecies model of the North Sea

  5. Study of the Antimicrobial Activity of Tilapia Piscidin 3 (TP3) and TP4 and Their Effects on Immune Functions in Hybrid Tilapia (Oreochromis spp.)

    Science.gov (United States)

    Pan, Chieh-Yu; Tsai, Tsung-Yu; Su, Bor-Chyuan; Hui, Cho-Fat; Chen, Jyh-Yih

    2017-01-01

    To address the growing concern over antibiotic-resistant microbial infections in aquatic animals, we tested several promising alternative agents that have emerged as new drug candidates. Specifically, the tilapia piscidins are a group of peptides that possess antimicrobial, wound-healing, and antitumor functions. In this study, we focused on tilapia piscidin 3 (TP3) and TP4, which are peptides derived from Oreochromis niloticus, and investigated their inhibition of acute bacterial infections by infecting hybrid tilapia (Oreochromis spp.) with Vibrio vulnificus and evaluating the protective effects of pre-treating, co-treating, and post-treating fish with TP3 and TP4. In vivo experiments showed that co-treatment with V. vulnificus and TP3 (20 μg/fish) or TP4 (20 μg/fish) achieved 95.3% and 88.9% survival rates, respectively, after seven days. When we co-injected TP3 or TP4 and V. vulnificus into tilapia and then re-challenged the fish with V. vulnificus after 28 days, the tilapia exhibited survival rates of 35.6% and 42.2%, respectively. Pre-treatment with TP3 (30 μg/fish) or TP4 (20 μg/fish) for 30 minutes prior to V. vulnificus infection resulted in high survival rates of 28.9% and 37.8%, respectively, while post-treatment with TP3 (20 μg/fish or 30 μg/fish) or TP4 (20 μg/fish) 30 minutes after V. vulnificus infection yielded high survival rates of 33.3% and 48.9%. In summary, pre-treating, co-treating, and post-treating fish with TP3 or TP4 all effectively decreased the number of V. vulnificus bacteria and promoted significantly lower mortality rates in tilapia. The minimum inhibitory concentrations (MICs) of TP3 and TP4 that were effective for treating fish infected with V. vulnificus were 7.8 and 62.5 μg/ml, respectively, whereas the MICs of kanamycin and ampicillin were 31.2 and 3.91 μg/ml. The antimicrobial activity of these peptides was confirmed by transmission electron microscopy (TEM) and scanning electron microscopy (SEM), both of which showed

  6. Causes and projections of abrupt climate-driven ecosystem shifts in the North Atlantic

    DEFF Research Database (Denmark)

    Beaugrand, G.; Edwards, M.; Brander, Keith;

    2008-01-01

    and carrying capacity of ecosystems and may, combined with fishing, precipitate the reduction of some stocks of Atlantic cod already severely impacted by exploitation. These findings offer a way to anticipate major ecosystem changes and to propose adaptive strategies for marine exploited resources such as cod...

  7. Cod avoidance by area regulations in Kattegat

    DEFF Research Database (Denmark)

    Eliasen, Søren Qvist

    2014-01-01

    presents two initiatives for cod avoidance in Kattegat; a fisher initiative sharing information about cod bycatch which could lead to real time closures in areas with high bycatch of juveniles, for vessels with low cod quota to avoid catch of all cod, and a Danish Swedish Government initiative of permanent......The article examines the experiences of two initiatives of cod avoidance by area regulations in the Kattegat in the light of the upcoming discard ban in EU fisheries. The first section highlights elements of the discard ban in the reformed EU Common Fisheries Policy (CFP). The second section...... and temporary area closures in Kattegat. The third section discusses the lessons learned in the light of implementation of the discard ban. The fourth section sums up the lessons learned; Regional measures of implementation of the discard ban should include all vessels with quota in the region to be regarded...

  8. AFSC/REFM: Pacific cod Localized Depletion Study

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Data from Localized Depletion study for Pacific cod 2001-2005. Study was conducted using cod pot gear to measure localized abundance of Pacific cod inside and...

  9. Alternative adaptive immunity strategies: coelacanth, cod and shark immunity.

    Science.gov (United States)

    Buonocore, Francesco; Gerdol, Marco

    2016-01-01

    The advent of high throughput sequencing has permitted to investigate the genome and the transcriptome of novel non-model species with unprecedented depth. This technological advance provided a better understanding of the evolution of adaptive immune genes in gnathostomes, revealing several unexpected features in different fish species which are of particular interest. In the present paper, we review the current understanding of the adaptive immune system of the coelacanth, the elephant shark and the Atlantic cod. The study of coelacanth, the only living extant of the long thought to be extinct Sarcopterygian lineage, is fundamental to bring new insights on the evolution of the immune system in higher vertebrates. Surprisingly, coelacanths are the only known jawed vertebrates to lack IgM, whereas two IgD/W loci are present. Cartilaginous fish are of great interest due to their basal position in the vertebrate tree of life; the genome of the elephant shark revealed the lack of several important immune genes related to T cell functions, which suggest the existence of a primordial set of TH1-like cells. Finally, the Atlantic cod lacks a functional major histocompatibility II complex, but balances this evolutionary loss with the expansion of specific gene families, including MHC I, Toll-like receptors and antimicrobial peptides. Overall, these data point out that several fish species present an unconventional adaptive immune system, but the loss of important immune genes is balanced by adaptive evolutionary strategies which still guarantee the establishment of an efficient immune response against the pathogens they have to fight during their life.

  10. EAARL Topography-Cape Cod National Seashore

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Elevation maps (also known as Digital Elevation Models or DEMs) of Cape Cod National Seashore were produced from remotely-sensed, geographically-referenced elevation...

  11. EAARL Topography-Cape Cod National Seashore

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Elevation maps (also known as Digital Elevation Models or DEMs) of Cape Cod National Seashore were produced from remotely-sensed, geographically-referenced...

  12. Who’s your mama? Riverine hybridisation of threatened freshwater Trout Cod and Murray Cod

    Science.gov (United States)

    Unmack, Peter J.; Dyer, Fiona J.; Lintermans, Mark

    2016-01-01

    Rates of hybridization and introgression are increasing dramatically worldwide because of translocations, restocking of organisms and habitat modifications; thus, determining whether hybridization is occuring after reintroducing extirpated congeneric species is commensurately important for conservation. Restocking programs are sometimes criticized because of the genetic consequences of hatchery-bred fish breeding with wild populations. These concerns are important to conservation restocking programs, including those from the Australian freshwater fish family, Percichthyidae. Two of the better known Australian Percichthyidae are the Murray Cod, Maccullochella peelii and Trout Cod, Maccullochella macquariensis which were formerly widespread over the Murray Darling Basin. In much of the Murrumbidgee River, Trout Cod and Murray Cod were sympatric until the late 1970s when Trout Cod were extirpated. Here we use genetic single nucleotide polymorphism (SNP) data together with mitochondrial sequences to examine hybridization and introgression between Murray Cod and Trout Cod in the upper Murrumbidgee River and consider implications for restocking programs. We have confirmed restocked riverine Trout Cod reproducing, but only as inter-specific matings, in the wild. We detected hybrid Trout Cod–Murray Cod in the Upper Murrumbidgee, recording the first hybrid larvae in the wild. Although hybrid larvae, juveniles and adults have been recorded in hatcheries and impoundments, and hybrid adults have been recorded in rivers previously, this is the first time fertile F1 have been recorded in a wild riverine population. The F1 backcrosses with Murray cod have also been found to be fertile. All backcrosses noted were with pure Murray Cod. Such introgression has not been recorded previously in these two species, and the imbalance in hybridization direction may have important implications for restocking programs.

  13. Walking the cod: an investigation into the relative robustness of cod, Gadus morhua, skeletal elements

    Directory of Open Access Journals (Sweden)

    Andrew K.G. Jones

    1999-12-01

    Full Text Available A simple experiment is described which details what happens to the bones of cod when they are walked on by a man. The pattern of fragmentation for various elements is illustrated and an index of robustness proposed for those elements in a cod skeleton most frequently recovered from archaeological sites.

  14. Analysing migrations of Atlantic cod Gadus morhua in the north‐east Atlantic Ocean

    DEFF Research Database (Denmark)

    Neuenfeldt, S.; Righton, D.; Neat, F.;

    2013-01-01

    The application of data storage tags bears the potential for a quantum leap in the research on fish migrations, because not only first-capture and recapture positions are known, but at least theoretically, the migration path during the period at large can be reconstructed. Position, however, cannot...... descriptions, separation of reproductively isolated populations, timing and areas of spawning, tidal transport and use of protected areas. The examples are based on archival tag data from the North Sea, the Baltic Sea, the Barents Sea and Faroese and Icelandic Waters. Besides presenting the state...

  15. CHARACTERIZATION OF WESTERN NORTH ATLANTIC RIGHT WHALE SPRING FEEDING HABITAT

    Science.gov (United States)

    The Great South Channel region of the southwestern Gulf of Maine, between George's Bank and Cape Cod, is the primary spring feeding ground for the western North Atlantic population of the I northern right whale, E. glacialis .Since this whale is so endangered, it is critical to i...

  16. Towards sustainable fisheries of the Öresund cod (Gadus morhua) through sub-stock-specific assessment and management recommendations

    DEFF Research Database (Denmark)

    Lindegren, Martin; Waldo, Staffan; Nilsson, P. Anders;

    2013-01-01

    Fisheries management traditionally relies on stock assessments assuming discrete populations within large administrational areas. However, failing to account for sub-stock structuring may result in overestimation of the stocks' true harvest potential and unsustainable exploitation of small stock...... elements. Atlantic cod (Gadus morhua) frequently occurs in spatially segregated populations, some of which exhibit fine-scaled stock structuring within current management boundaries. Here we use the locally spawning cod stock in the Sound (“Öresund”) as a case study, and perform a sub-stock......-specific assessment to evaluate biological and economic effects of managing the Sound cod as a separate stock. Our results indicate that reducing exploitation pressure, particularly through technical regulations i.e. increasing gill-net mesh sizes, would not only enhance the stock age distribution, but yield long...

  17. Annual and spatial variability in endo- and ectoparasite infections of North Sea cod (Gadus morhua Linnaeus, 1758) larvae, post-larvae and juveniles

    DEFF Research Database (Denmark)

    Mehrdana, Foojan; Bahlool, Qusay Z. M.; Skovgaard, Alf;

    2014-01-01

    A parasitological investigation was performed on a total of 5380 Atlantic cod larvae, post-larvae and small juveniles sampled from the North Sea during a period of five years. The copepod Caligus elongatus (Von Nordmann, 1832) and the nematode Hysterothylacium aduncum (Rudolphi, 1802) were found...

  18. Slow adaptation in the face of rapid warming leads to collapse of the Gulf of Maine cod fishery.

    Science.gov (United States)

    Pershing, Andrew J; Alexander, Michael A; Hernandez, Christina M; Kerr, Lisa A; Le Bris, Arnault; Mills, Katherine E; Nye, Janet A; Record, Nicholas R; Scannell, Hillary A; Scott, James D; Sherwood, Graham D; Thomas, Andrew C

    2015-11-13

    Several studies have documented fish populations changing in response to long-term warming. Over the past decade, sea surface temperatures in the Gulf of Maine increased faster than 99% of the global ocean. The warming, which was related to a northward shift in the Gulf Stream and to changes in the Atlantic Multidecadal Oscillation and Pacific Decadal Oscillation, led to reduced recruitment and increased mortality in the region's Atlantic cod (Gadus morhua) stock. Failure to recognize the impact of warming on cod contributed to overfishing. Recovery of this fishery depends on sound management, but the size of the stock depends on future temperature conditions. The experience in the Gulf of Maine highlights the need to incorporate environmental factors into resource management.

  19. An Oscillating Jet in the Cape Cod Bay

    Science.gov (United States)

    Poulin, F. J.; Flierl, G. R.

    2004-05-01

    During the spring months, the Cape Cod Bay is a roaming ground for the North Atlantic right whale, perhaps the most endangered whale species in the world. The whales are observed to travel along the topographic steps that run parallel to the shore, eating plankton patches that form in the coastal water. In this region, off the coast of Provincetown, there is an oscillatory current with the same period as that of the ambient tides. The location of the current and its periodicity suggest that the topography and tides play fundamental roles in generating the jet. This current, depending on its velocity profile, may become unstable and generate vortices. It is likely that the local surface convergences and divergences in the tidal flows and vortices are related to the aggregation of the copepods (Calanus Finmarchicus), which are the right whale's primary food source. Understanding the dynamics of this jet is essential to predicting the spatial and temporal patterns of the codepods, which will in turn help us understand the likely locations and feeding history of the whales. In this talk we discuss results of the first phase of this study, that of the oscillatory jet in the Cape Cod Bay. This jet is rather complicated since it involves complex topography and coastlines, bottom and lateral friction, stratification and numerous other effects. Rather than study this system in fine detail, we investigate an idealized model that captures the essential features. In the context of this model, we first compute possible profiles for the oscillating jet. We then solve the linear stability problem to determine how the growth rates depend on the various parameters. Finally, and most importantly, we study the nonlinear problem to observe the time evolution of the instability process along with its equilibration. This provides some insight into how the instabilities are related to fluid transport across the shelf.

  20. Restricted fish feeding reduces cod otolith opacity

    DEFF Research Database (Denmark)

    Høie, H.; Folkvord, A.; Mosegaard, Henrik

    2008-01-01

    The purpose of this work was to examine the effect of reduced feeding and constant temperature on cod otolith opacity. Three groups of juvenile cod were given restricted food rations at different times for 4 months, resulting in depressed somatic growth. Otolith opacity was measured on pictures...... in otolith opacity were found between individual fish both within groups and between groups. In two of the three groups significantly more translucent otolith material was deposited in response to reduced feeding. Our results show that variations in feeding and hence fish growth resulted in variation...

  1. A modified method for COD determination of solid waste, using a commercial COD kit and an adapted disposable weighing support.

    Science.gov (United States)

    André, L; Pauss, A; Ribeiro, T

    2017-03-01

    The chemical oxygen demand (COD) is an essential parameter in waste management, particularly when monitoring wet anaerobic digestion processes. An adapted method to determine COD was developed for solid waste (total solids >15%). This method used commercial COD tubes and did not require sample dilution. A homemade plastic weighing support was used to transfer the solid sample into COD tubes. Potassium hydrogen phthalate and glucose used as standards showed an excellent repeatability. A small underestimation of the theoretical COD value (standard values around 5% lower than theoretical values) was also observed, mainly due to the intrinsic COD of the weighing support and to measurement uncertainties. The adapted COD method was tested using various solid wastes in the range of 1-8 mgCOD, determining the COD of dried and ground cellulose, cattle manure, straw and a mixed-substrate sample. This new adapted method could be used to monitor and design dry anaerobic digestion processes.

  2. Distribution of water in fresh cod

    DEFF Research Database (Denmark)

    Andersen, Charlotte Møller; Rinnan, A.

    2002-01-01

    Low-field (1)H nuclear magnetic resonance (NMR) transverse relaxation was used to measure water mobility and distribution of water in fresh cod fillets. The NMR relaxations were analysed with the so-called SLICING method giving uni-exponential profiles from which the transverse relaxation time (T(2...

  3. Sediments of Cape Cod Bay, Massachusetts (HOUGH42 shapefile)

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Cape Cod Bay, lying on the Massachusetts coast partly enclosed by Cape Cod, is in a glaciated region of low relief. Coarse sediments generally occur in areas exposed...

  4. The influence of the ratio of protein energy to total energy in the feed on the activity of protein synthesis in vitro, the level of ribosomal RNA and the RNA-DNA ratio in white trunk muscle of Atlantic cod (Gadus morhua).

    Science.gov (United States)

    Lied, E; Rosenlund, G

    1984-01-01

    Cod (Gadus morhua) were fed diets containing protein energy to total energy levels (PE/TE) of 10.0, 20.6, 29.6, 38.4, 56.2 and 74.1% for 21 days. Ribosomes were isolated from the white trunk muscle tissue, the capacity for protein synthesis in vitro determined and related to muscle tissue wet weight rRNA and DNA. Protein concentrations of less than 47.4% PE/TE in the diets reduce the ribosomal capacity for protein synthesis per g wet weight and per mg DNA, and the tissue contents of rRNA and ratio of rRNA/DNA. The capacity for muscle protein synthesis in vitro is a significant and sensitive parameter of protein inadequacy in fish diets.

  5. Selective haddock (Melanogrammus aeglefinus) trawling: Avoiding cod (Gadus morhua) bycatch

    DEFF Research Database (Denmark)

    Krag, Ludvig Ahm; Holst, René; Madsen, Niels;

    2010-01-01

    The critical condition of the North Sea cod stocks has resulted in restrictions on not only cod, but also haddock and other species that are caught together with cod. Thus full exploitation of the haddock stock is unachievable unless cod can be excluded from the haddock catch. We designed a selec...... dependent: smaller cod escaped the trawl in greater numbers than did larger individuals. Whiting, saithe. lemon sole, and plaice were included in the analysis. (C) 2009 Elsevier B.V. All rights reserved....

  6. Cycles and trends in cod populations.

    Science.gov (United States)

    Bjørnstad, O N; Fromentin, J M; Stenseth, N C; Gjøsaeter, J

    1999-04-27

    Year-to-year fluctuations in fish stocks are usually attributed to variability in recruitment, competition, predation, and changes in catchability. Trends in abundance, in contrast, are usually ascribed to human exploitation and large-scale environmental changes. In this study, we demonstrate, through statistical modeling of survey data (1921-1994) of cod from the Norwegian Skagerrak coast, that both short- and long-term variability may arise from the same set of age-structured interactions. Asymmetric competition and cannibalism between cohorts generate alternating years of high and low abundance. Intercohort interactions also resonate the recruitment variability so that long-term trends are induced. The coupling of age-structure and variable recruitment should, therefore, be considered when explaining both the short- and long-term fluctuations displayed by the coastal cod populations. Resonant effects may occur in many marine populations that exhibit this combination of traits.

  7. Sensory characteristics of different cod products

    DEFF Research Database (Denmark)

    Sveinsdottir, K.; Martinsdottir, E.; Hyldig, Grethe;

    2010-01-01

    to be more applicable for studying results of extensive data sets by handling missing values and estimating the significance of sensory attributes. The practical use of the paper is also a quantitative descriptive analysis vocabulary, which may be used as a basis for other studies with cod. It may also...... atmosphere) were evaluated with quantitative descriptive analysis by a trained sensory panel. Signal-to-noise analysis, p*MSE (discrimination and repeatability) and line plots proved to be very useful in studying panelists' performance. Most sensory attributes described significant differences between...... storage methods had minor influence on sensory characteristics of cod fillets after short storage time, but after extended storage, the groups were different with regard to most attributes. PRACTICAL APPLICATIONS This paper presents different ways of analyzing sensory data. The process of analysis...

  8. Particulate COD balance of particulate cod in eletrocuagulation/flotation reactor treating tannery effluent

    Directory of Open Access Journals (Sweden)

    Rodrigo Babora Borri

    2012-04-01

    Full Text Available Mass balance or particulate organic matter was studied in terms of COD, by means of electrocoagulation/flotation (ECF reactor treating tannery effluent. Reactor was operated in fill and draw (batch mode. Operating in hydraulic residence time of 65 minutes, ECF reactor reached 55 % COD removal. Although volatile solids were also removed from liquid phase (removal of 40%, fixed solids concentration, and hence total solids concentration, showed to be higher in withdrawn effluent than in ECF’s influent. This was assigned to NaCl added in order to enhance conductivity in wastewater.

  9. The effect of electric pulse stimulation to juvenile cod and cod of commercial landing size

    NARCIS (Netherlands)

    Haan, de D.; Fosseidengen, J.E.; Fjelldal, P.G.; Burggraaf, D.

    2011-01-01

    The first pilot study on the effects of electric pulse stimulation on larger cod carried out in 2008 was based on a single nominal setting of the Verburg-Holland UK153 pulse system with the intention to determine the range of pulse characteristics with which injuries to the fish occurred. This study

  10. 1H NMR metabolic profiling of cod (Gadus morhua larvae: potential effects of temperature and diet composition during early developmental stages

    Directory of Open Access Journals (Sweden)

    Matilde Skogen Chauton

    2015-12-01

    Full Text Available Marine aquaculture offers a great source of protein for the increasing human population, and farming of, for example, Atlantic salmon is a global industry. Atlantic cod farming however, is an example of a promising industry where the potential is not yet realized. Research has revealed that a major bottleneck to successful farming of cod is poor quality of the larvae and juveniles. A large research program was designed to increase our understanding of how environmental factors such as temperature and nutrition affects cod larvae development. Data on larvae growth and development were used together with nuclear magnetic resonance. The NMR data indicated that the temperature influenced the metabolome of the larvae; differences were related to osmolytes such as betaine/TMAO, the amino acid taurine, and creatine and lactate which reflect muscle activity. The larvae were fed Artemia from stage 2, and this was probably reflected in a high taurine content of older larvae. Larvae fed with copepods in the nutrition experiment also displayed a high taurine content, together with higher creatine and betaine/TMAO content. Data on the cod larvae metabolome should be coupled to data on gene expression, in order to identify events which are regulated on the genetic level versus regulation resulting from temperature or nutrition during development, to fully understand how the environment affects larval development.

  11. 1H NMR metabolic profiling of cod (Gadus morhua) larvae: potential effects of temperature and diet composition during early developmental stages

    Science.gov (United States)

    Chauton, Matilde Skogen; Galloway, Trina Falck; Kjørsvik, Elin; Størseth, Trond Røvik; Puvanendran, Velmurugu; van der Meeren, Terje; Karlsen, Ørjan; Rønnestad, Ivar; Hamre, Kristin

    2015-01-01

    ABSTRACT Marine aquaculture offers a great source of protein for the increasing human population, and farming of, for example, Atlantic salmon is a global industry. Atlantic cod farming however, is an example of a promising industry where the potential is not yet realized. Research has revealed that a major bottleneck to successful farming of cod is poor quality of the larvae and juveniles. A large research program was designed to increase our understanding of how environmental factors such as temperature and nutrition affects cod larvae development. Data on larvae growth and development were used together with nuclear magnetic resonance. The NMR data indicated that the temperature influenced the metabolome of the larvae; differences were related to osmolytes such as betaine/TMAO, the amino acid taurine, and creatine and lactate which reflect muscle activity. The larvae were fed Artemia from stage 2, and this was probably reflected in a high taurine content of older larvae. Larvae fed with copepods in the nutrition experiment also displayed a high taurine content, together with higher creatine and betaine/TMAO content. Data on the cod larvae metabolome should be coupled to data on gene expression, in order to identify events which are regulated on the genetic level versus regulation resulting from temperature or nutrition during development, to fully understand how the environment affects larval development. PMID:26545964

  12. Comment on “Slow adaptation in the face of rapid warming leads to collapse of the Gulf of Maine cod fishery”

    Science.gov (United States)

    Palmer, Michael C.; Deroba, Jonathan J.; Legault, Christopher M.; Brooks, Elizabeth N.

    2016-04-01

    Pershing et al. (Reports, 13 November, p. 809) concluded that failure to account for temperature in the assessment and management of Gulf of Maine Atlantic cod caused overfishing. We argue that the “extra mortality” calculation driving this conclusion is an artifact. Environmental factors affect all stocks, but attribution of additional mortality to temperature alone by Pershing et al. is unsupported by the data.

  13. Hydrogeologic framework of western Cape Cod, Massachusetts

    Science.gov (United States)

    Masterson, John P.; Stone, Byron D.; Walter, Donald A.; Savoie, Jennifer G.

    1997-01-01

    The aquifer of western Cape Cod consists of several hydrogeologic units composed of sand, gravel, silt, and clay (fig. 1) that were deposited during the late Wisconsinan glaciation of New England. The aquifer is a shallow, unconfined hydrologic system in which ground-water flows radially outward from the apex of the ground-water mound near the center of the peninsula toward the coast (fig.2). The aquifer is the sole source of water supply for the towns of Bourne, Sandwich, Falmouth, and Mashpee, and the Massachusetts Military Reservation (MMR).Previous geologic studies summarized the characteristics and relative ages of the glacial moraines and meltwater deposits and the relation of these sediments to the extent of the ice-sheet lobes during the last glaciation of southern New England (Oldale and Barlow, 1986; Hartshorn and others, 1991). Hydrogeologic studies in western Cape Cod characterized the shallow regional ground-water-flow system (LeBlanc and others, 1986) and analyzed simulated responses of the aquifer to changes in hydrologic stresses (Guswa and LeBlanc, 1985; Barlow and Hess, 1993; Masterson and Barlow, 1994; and Masterson and others, 1996). Recent concerns about widespread ground-water contamination, especially from sources on the MMR, have resulted in extensive investigations to characterize the local hydrogeology of the aquifer near the MMR (ABB Environmental Services, 1992). Masterson and others (1996) illustrated the strong influence of geology on ground-water flow and the importance of characterizing the hydrogeology to predict the migration of the contaminant plumes beneath the MMR.This report, a product of a cooperative study between the National Guard Bureau and the U.S. Geological Survey (USGS), characterizes the regional hydrogeology of the western Cape Cod aquifer on the basis of surficial glacial geology previously described by Mather and others (1940) and Oldale and Barlow (1986), and presents a new analysis of the subsurface hydrogeology

  14. New species in the genus Francisella (Gammaproteobacteria; Francisellaceae); Francisella piscicida sp. nov. isolated from cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Ottem, Karl F; Nylund, Are; Karlsbakk, Egil;

    2007-01-01

    A Francisella strain, GM2212, previously isolated from moribund farmed Atlantic cod (Gadus morhua) in Norway, is closely related to Francisella philomiragia among Francisella spp. according to its complete 16S rDNA, 16S-23S intergenic spacer, 23S rDNA, 23S-5S intergenic spacer, 5S rDNA, FopA, lip...... the establishment of GM2212 as a novel species, for which the name Francisella piscicida sp. nov. is proposed (=CNCM I-3511(T) = DSM 18777(T) = LMG registration number not yet available)....

  15. 33 CFR 117.589 - Cape Cod Canal.

    Science.gov (United States)

    2010-07-01

    ... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false Cape Cod Canal. 117.589 Section 117.589 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Massachusetts § 117.589 Cape Cod Canal. The draw of the Conrail railroad bridge, mile 0.7 at...

  16. Rationale for restocking the Eastern Baltic cod stock

    DEFF Research Database (Denmark)

    Støttrup, Josianne; Overton, Julia Lynne; Paulsen, Helge;

    2008-01-01

    The Danish Institute for Fisheries Research and Bornholm's Salmon Hatchery examined the potential for restocking Baltic cod (Gadus morhua callarias L.) in the eastern Baltic Sea. This cod population has adapted to the unique brackish water conditions where successful spawning depends on regular i...

  17. Could seals prevent cod recovery in the Baltic Sea?

    Directory of Open Access Journals (Sweden)

    Brian R MacKenzie

    Full Text Available Fish populations are increasingly affected by multiple human and natural impacts including exploitation, eutrophication, habitat alteration and climate change. As a result many collapsed populations may have to recover in ecosystems whose structure and functioning differ from those in which they were formerly productive and supported sustainable fisheries. Here we investigate how a cod (Gadus morhua population in the Baltic Sea whose biomass was reduced due to a combination of high exploitation and deteriorating environmental conditions might recover and develop in the 21st century in an ecosystem that likely will change due to both the already started recovery of a cod predator, the grey seal Halichoerus grypus, and projected climate impacts. Simulation modelling, assuming increased seal predation, fishing levels consistent with management plan targets and stable salinity, shows that the cod population could reach high levels well above the long-term average. Scenarios with similar seal and fishing levels but with 15% lower salinity suggest that the Baltic will still be able to support a cod population which can sustain a fishery, but biomass and yields will be lower. At present knowledge of cod and seal interactions, seal predation was found to have much lower impact on cod recovery, compared to the effects of exploitation and salinity. These results suggest that dual management objectives (recovery of both seal and cod populations are realistic but success in achieving these goals will also depend on how climate change affects cod recruitment.

  18. STUDY ON THE RELATIONSHIP BETWEEN J-INTEGRAL AND COD

    Institute of Scientific and Technical Information of China (English)

    Y. G. Cao; X. Y. Sun; K. Tanaka

    2007-01-01

    J-integral and crack opening displacement δ (COD) were important parameters for characterizationof fractures in engineering materials. The relationship between J-integral and COD has beeninvestigated for a long time and was generally represented as J = mσyδ, where σy is the yield strengthand m is a function of specimen geometry and material properties. To determine the value of m,extensive studies and experiments have been performed. The method that used the fracture-surfacetopography analysis (FRASTA) for determining J-integral from fracture surfaces of materials wasintroduced. On the basis of the relationship between COD and fracture surface average profile,the relationship between J-integral and COD was deduced and compared with the generally usedequation. The method was experimentally confirmed to be able to provide a new way to determinethe relationship between J-integral and COD.

  19. Does DNA extraction affect the physical and chemical composition of historical cod (Gadus morhua) otoliths?

    DEFF Research Database (Denmark)

    Therkildsen, Nina Overgaard; Eg Nielsen, Einar; Hüssy, Karin

    2010-01-01

    conflicting interests regarding how the limited and irreplaceable otolith collections should be used. To resolve this, it is important to find out whether DNA extraction damages otoliths such that they can no longer be used for other research purposes or whether individual otoliths can be used in multiple...... applications. We examined the effects of three different DNA extraction methods on the elemental composition, the morphology, and the clarity of annual growth increments for successful age estimation of Atlantic cod (Gadus morhua) otoliths that had been archived for 0–31 years. The three extraction methods...... yielded DNA of comparable quality, and none of the methods caused major damage to the otoliths. Of the element concentrations measured, only Mg and Rb showed considerable changes resulting from DNA extraction. The physical properties of the otolith (morphology and clarity of annual growth increments) were...

  20. The COD Model: Simulating Workgroup Performance

    Science.gov (United States)

    Biggiero, Lucio; Sevi, Enrico

    Though the question of the determinants of workgroup performance is one of the most central in organization science, precise theoretical frameworks and formal demonstrations are still missing. In order to fill in this gap the COD agent-based simulation model is here presented and used to study the effects of task interdependence and bounded rationality on workgroup performance. The first relevant finding is an algorithmic demonstration of the ordering of interdependencies in terms of complexity, showing that the parallel mode is the most simplex, followed by the sequential and then by the reciprocal. This result is far from being new in organization science, but what is remarkable is that now it has the strength of an algorithmic demonstration instead of being based on the authoritativeness of some scholar or on some episodic empirical finding. The second important result is that the progressive introduction of realistic limits to agents' rationality dramatically reduces workgroup performance and addresses to a rather interesting result: when agents' rationality is severely bounded simple norms work better than complex norms. The third main finding is that when the complexity of interdependence is high, then the appropriate coordination mechanism is agents' direct and active collaboration, which means teamwork.

  1. Farmed cod escapees and net-pen spawning left no clear genetic footprint in the local wild cod population

    Directory of Open Access Journals (Sweden)

    Rebekka Varne

    2015-11-01

    Full Text Available This study investigated a potential genetic introgression from farmed to wild cod Gadus morhua L. in the Trondheimsfjord, Norway. During the first 2 yr of operation of a cod farm in the inner part of the fjord, 2 large escape events and extensive pen spawning were reported. Analyses of 4 allozyme markers revealed no significant changes in allele frequencies between samples of wild cod before and after cod farming, although prominent allele frequency differences were demonstrated between wild and farmed samples. Analyses of 10 DNA markers showed a significant change between pre- and post-farming samples, due to contradictory allele frequency differences at Tch11, Pan I and Gmo132. Excluding those 3 markers due to null alleles (Tch11 and selection (Gmo132 and Pan I, the DNA markers paralleled the non-changed allele frequency signal from the allozymes. The topographies of the allozyme- and DNA-based dendrogram of the samples were congruent. Recaptures of tagged and released farmed cod indicated a seemingly random diffusion throughout the fjord and ended after approx. 6 mo. During an ongoing pen spawning, plankton net surveys sampling for cod eggs in the surroundings of the cod farm suggested the eggs originated from the farm. No larvae were present in the plankton samples. The apparent absence of introgression is explained relative to fitness and survival of pen-spawned larvae and adult escapees, and to a purging effect of the estuarine circulation of the Trondheimsfjord.

  2. Monitoring the desalting process of cod using dielectric spectroscopy.

    Science.gov (United States)

    De los Reyes, Ruth; Balbastre, Juan V; Andrés, Ana; Fito, Pedro; De los Reyes, Elias

    2009-01-01

    The desalted cod industry needs a suitable and reliable control system to check the desalting point of cod in order to provide a safe and high-quality product. The growth of the industries that are interested in a non-contacting, real-time control, encourages the development of new methods based on low-power radiation, such as dielectric spectroscopy. These techniques use the modification of wave parameters at some specific frequencies to provide information of the compositional characteristics of foods. In this work, cod parallelepipeds were desalted at 5 degrees C by immersing them in distilled water for different desalting times (15 and 30 minutes and 1, 2, 4, 6, 8, 12, 24 and 48 hours). Dielectric Spectroscopy studies have been performed on cod samples in the frequency range 200 MHz-20 GHz. The dielectric properties were measured using a coaxial probe (Agilent 85070E) connected to a Network Analyzer (Agilent E8362B) immediately after removing the cod samples from their desalting solutions. After desalting, the cod samples were separated from their desalting solutions and kept in repose for 24 h at 5 degrees C after which some of their physical properties were measured. This experimental procedure ensures that those properties have already reached their final values. Good correlations were found between the quality properties of the cod samples (a(w), Xw, Z(NaCl) and xNaCl) after 24 h and their loss factor (epsilon") measured at 10 GHz just before leaving them in repose, showing the feasibility of an in-line control system for cod desalting process at that frequency.

  3. Salted and dried Cod preserved by vacuum and modified atmosphere

    Directory of Open Access Journals (Sweden)

    Maria José Rodrigues

    2014-06-01

    Full Text Available Temperatures higher than 20ºC can boost the growth, on the salted and dried cod surface, of bacteria that present a red pigment (Rodrigues et al., 2003; Rodrigues et al., 2005. These organisms, besides the change of the food product appearance, also cause an unpleasant flavor and the product is rejected by the consumers, although does not cause any health concern. Currently, the export of salted and dried cod, to Africa, has increased and a great amount of product is rejected due to the high environmental temperature and the lack of a proper cold chain storage infrastructure. Vacuum packaging, and modified atmosphere packaging have been used for fresh and cooked seafood preservation, but, as far as the authors know, were never used to preserve salted and dried fish. In the present study it was observed the effect of vacuum packaging, packaging with 80%N2:20%CO2 and finally the addition of sodium metabisulfite on the salted and dried cod stored under temperature abuse (15ºC, 25ºC and 35ºC. Accordingly, packaging under vacum and, specially, packaging with 80%N2:20%CO2 successfuly increased the shellife of salted and dried cod . The addition of sodium metabisulfite has increased the shelflife of salted and dried cod preserved at 15ºC, but not of salted and dried cod preserved at 25ºC and 35ºC.

  4. South Atlantic Shrimp System

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The SEFSC, in cooperation with the South Atlantic states, collects South Atlantic shrimp data from dealers and fishermen. These data are collected to provide catch,...

  5. 2005 Atlantic Hurricanes Poster

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The 2005 Atlantic Hurricanes poster features high quality satellite images of 15 hurricanes which formed in the Atlantic Basin (includes Gulf of Mexico and Caribbean...

  6. Shell plans big COD/sub 2/U miscible drive

    Energy Technology Data Exchange (ETDEWEB)

    1966-04-18

    Shell Oil Co. is seeking approval from the Texas Railroad Commission for the first field test using COD2U as a miscible slug. The test would take place in the Crossett Field, Crane and Upton Counties, 5 miles West of McCamey. Plan calls for injecting a large slug of COD2U in the Devonian reservoir, and following this with water to maintain reservoir pressure and serve as a sweeping medium. If the method works as anticipated, Shell says it will recover 32.8 million bbl of 44$-gravity crude--or 63.8% of the oil originally in place. Residue gas in now being injected in the field's North Cross unit. Widespread application of the process, if it works as hoped, seems unlikely because of the difficulty and cost of transporting COD2U where it is needed. However, ample supplies of COD2U are available in West Texas. There are at least 3 sources of COD2U in the vicinity. Norhtern Natural Gas Co. is venting some 20 MMcfd at is gas processing plant at Puckett field in Pecos County. Not far away is Hunt Oil Co.'s 57 Elsinore Ranch well, a dry hole that tested COD2U at the rate of 19 MMcfd. The most likely source of COD2U for Shell's proposed test is El Paso Natural Gas Co.'s processing plant at Brown-Basset Field in Terrell County, where gas is now being vented to the atmosphere at the rate of 40 MMscfd.

  7. Fathers modify thermal reaction norms for hatching success in Atlantic cod, Gadus morhua

    DEFF Research Database (Denmark)

    Dahlke, Flemming T.; Politis, Sebastian Nikitas; Butts, Ian

    2016-01-01

    survival among half-sibling families and temperature treatments was observed during blastula and gastrulation stages (until 100% epiboly), while almost no mortality occurred during subsequent development and throughout the hatching period. The observed magnitude of genetic variation underlying thermal......Climate-driven warming is altering marine ecosystems at an unprecedented rate and evolutionary adaptation may represent the last resort for many ectothermic organisms to avoid local extinction. The first step to elucidate the potential for adaptation to unfavorable thermal conditions is to assess...... the degree of genotype-based variation in thermal reaction norms of vital fitness traits. Marine broadcast spawning fishes experience extremely high rates ofmortality during early life stages. Paternally derived (genetic) variation underlying offspring fitness in adverse environmental conditions may...

  8. Correlations between hemoglobin type and temperature preference of juvenile Atlantic cod Gadus morhua

    DEFF Research Database (Denmark)

    Behrens, Jane W.; Gräns, Albin; Therkildsen, Nina Overgaard

    2012-01-01

    chamber we recorded the preferred temperature of wild juvenile G. morhua of all three main Hbl types originating from an area where they co-exist. HbI-2/2 G. morhua preferred significantly cooler water (8.9±0.2 °C) compared to the HbI-1/1 group (11±0.6 °C), this difference, however, not being as distinct...... inconsistent thermoregulatory behavior. To obtain a more definitive picture of the extent to which thermal niches are realized under natural conditions field observations in areas where the 3 HbI types co-exist should be performed...

  9. Paternal effects on early life history traits in Northwest Atlantic cod, Gadus morhua

    DEFF Research Database (Denmark)

    Kroll, M.-M.; Peck, M.A.; Butts, Ian A.E.

    2013-01-01

    and survival. In marine fish, rates of natural mortality are highest during early life and are negatively correlated with rates of growth and body size. In these early life stages (eggs, larvae, young juveniles) subtle differences in mortality can cause large differences in recruitment and year-class success...... this 12 males and two females were crossed using a full-factorial breeding design. Paternity had a strong influence on fertilization success, hatching success, cumulative embryonic mortality, larval standard length, eye diameter, yolk-sac area, and cumulative larval mortality. Female 1 showed an overall...

  10. Temperature, paternity and asynchronous hatching influence early developmental characteristics of larval Atlantic cod, Gadus morhua

    DEFF Research Database (Denmark)

    Politis, Sebastian Nikitas; Dahlke, Flemming T.; Butts, Ian A.E.;

    2014-01-01

    Offspring, especially during early development, are influenced by both intrinsic properties endowed to them by their parents, extrinsic environmental factors as well as the interplay between genes and the environment. We investigated the effects of paternity (P), temperature (T), and asynchronous...

  11. Social sustainability of cod and haddock fisheries in the northeast Atlantic: what issues are important?

    NARCIS (Netherlands)

    Veldhuizen, L.J.L.; Berentsen, P.; Bokkers, E.A.M.; Boer, de I.J.M.

    2015-01-01

    Research on the sustainability of capture fisheries has focused more on environmental and economic sustainability than on social sustainability. To assess social sustainability, first relevant and important social sustainability issues need to be identified. The objective of this study was to identi

  12. A New Spectrophotometric Method for Measuring COD of Seawater

    Institute of Scientific and Technical Information of China (English)

    LIU Ying; JI Hongwei; XIN Huizhen; LIU Li

    2006-01-01

    This research studied a new spectrophotometric method for measuring the chemical oxygen demand (COD) of seawater. In this method, the COD was measured using a spectrophotometer instead of titrating with sodium thiosulphate.The measuring wavelength was selected to be 470 nm, and the COD of three standard glucose solutions (COD = 0.5, 1.5 and2.5 mgL-1, respectively) and two seawater samples (from the South Yellow Sea and Jiaozhou Bay) were measured using the spectrophotometric method and titrimetric method respectively. The results showed that the spectrophotometric method was somewhat better than the titrimetric method. The relative standard deviation (RSD) of the spectrophotometric method was less than 2.7%, and the recovery of seawater samples ranged from 96.3% to 103.8%. In addition, the spectrophotometric method has other advantages such as expeditiousness, operation simplicity, analysis automatization, etc. Therefore the spectrophotometric method can be used to measure the COD of seawater with satisfactory results.

  13. Mortality trends of stranded marine mammals on Cape Cod and southeastern Massachusetts, USA, 2000 to 2006.

    Science.gov (United States)

    Bogomolni, Andrea L; Pugliares, Katie R; Sharp, Sarah M; Patchett, Kristen; Harry, Charles T; LaRocque, Jane M; Touhey, Kathleen M; Moore, Michael

    2010-01-25

    To understand the cause of death of 405 marine mammals stranded on Cape Cod and southeastern Massachusetts between 2000 and 2006, a system for coding final diagnosis was developed and categorized as (1) disease, (2) human interaction, (3) mass-stranded with no significant findings, (4) single-stranded with no significant findings, (5) rock and/or sand ingestion, (6) predatory attack, (7) failure to thrive or dependent calf or pup, or (8) other. The cause of death for 91 animals could not be determined. For the 314 animals that could be assigned a cause of death, gross and histological pathology results and ancillary testing indicated that disease was the leading cause of mortality in the region, affecting 116/314 (37%) of cases. Human interaction, including harassment, entanglement, and vessel collision, fatally affected 31/314 (10%) of all animals. Human interaction accounted for 13/29 (45%) of all determined gray seal Halichoerus grypus mortalities. Mass strandings were most likely to occur in northeastern Cape Cod Bay; 97/106 (92%) of mass stranded animals necropsied presented with no significant pathological findings. Mass strandings were the leading cause of death in 3 of the 4 small cetacean species: 46/67 (69%) of Atlantic white-sided dolphin Lagenorhynchus acutus, 15/21 (71%) of long-finned pilot whale Globicephala melas, and 33/54 (61%) of short-beaked common dolphin Delphinus delphis. These baseline data are critical for understanding marine mammal population health and mortality trends, which in turn have significant conservation and management implications. They not only afford a better retrospective analysis of strandings, but ultimately have application for improving current and future response to live animal stranding.

  14. Implications of stock recovery for a neighbouring management unit: experience from the Baltic cod

    DEFF Research Database (Denmark)

    Eero, Margit; Hansen, Jakob Hemmer; Hüssy, Karin

    2014-01-01

    Cod in the Baltic Sea is assessed and managed as two separate stocks, i.e. eastern and western Baltic cod. The eastern Baltic cod has recently started to recover after several decades of severe depletion. In the present study, we suggest that the recovery of the eastern Baltic cod population has...... also substantially increased cod abundance in a specific area of the adjacent western Baltic management unit. This is investigated through long time-series of spatially resolved stock assessment data supplemented by genetic analyses of origin of the cod currently found in the transition area between...... the two populations. Due to immigrating cod from the east, there are currently large spatial differences in cod abundance and mean weight in the western Baltic management unit that raise new management concerns. First, the high abundance of cod of eastern origin found in the western Baltic management unit...

  15. COD removal characteristics in air-cathode microbial fuel cells

    KAUST Repository

    Zhang, Xiaoyuan

    2015-01-01

    © 2014 Elsevier Ltd. Exoelectrogenic microorganisms in microbial fuel cells (MFCs) compete with other microorganisms for substrate. In order to understand how this affects removal rates, current generation, and coulombic efficiencies (CEs), substrate removal rates were compared in MFCs fed a single, readily biodegradable compound (acetate) or domestic wastewater (WW). Removal rates based on initial test conditions fit first-order kinetics, but rate constants varied with circuit resistance. With filtered WW (100Ω), the rate constant was 0.18h- 1, which was higher than acetate or filtered WW with an open circuit (0.10h- 1), but CEs were much lower (15-24%) than acetate. With raw WW (100Ω), COD removal proceeded in two stages: a fast removal stage with high current production, followed by a slower removal with little current. While using MFCs increased COD removal rate due to current generation, secondary processes will be needed to reduce COD to levels suitable for discharge.

  16. Interaction between submicron COD crystals and renal epithelial cells

    Directory of Open Access Journals (Sweden)

    Peng H

    2012-08-01

    Full Text Available Hua Peng1,2 Jian-Ming Ouyang1,2 Xiu-Qiong Yao1, Ru-E Yang11Department of Chemistry, Jinan University, 2Institute of Biomineralization and Lithiasis Research, Jinan University, Guangzhou, ChinaObjectives: This study aims to investigate the adhesion characteristics between submicron calcium oxalate dihydrate (COD with a size of 150 ± 50 nm and African green monkey kidney epithelial cells (Vero cells before and after damage, and to discuss the mechanism of kidney stone formation.Methods: Vero cells were oxidatively injured by hydrogen peroxide to establish a model of injured cells. Scanning electron microscopy was used to observe Vero–COD adhesion. Inductively coupled plasma emission spectrometry was used to quantitatively measure the amount of adhered COD microcrystals. Nanoparticle size analyzer and laser scanning confocal microscopy were performed to measure the change in the zeta potential on the Vero cell surface and the change in osteopontin expression during the adhesion process, respectively. The level of cell injury was evaluated by measuring the changes in malonaldehyde content, and cell viability during the adhesion process.Results: The adhesion capacity of Vero cells in the injury group to COD microcrystals was obviously stronger than that of Vero cells in the control group. After adhesion to COD, cell viability dropped, both malonaldehyde content and cell surface zeta potential increased, and the fluorescence intensity of osteopontin decreased because the osteopontin molecules were successfully covered by COD. Submicron COD further damaged the cells during the adhesion process, especially for Vero cells in the control group, leading to an elevated amount of attached microcrystals.Conclusion: Submicron COD can further damage injured Vero cells during the adhesion process. The amount of attached microcrystals is proportional to the degree of cell damage. The increased amount of microcrystals that adhered to the injured epithelial

  17. A wasted resource: cod discards in the North Sea

    DEFF Research Database (Denmark)

    Feekings, Jordan P.; Poos, Jan Jaap; Aarts, Geert;

    2012-01-01

    The public, political, and stakeholder perception of fisheries discards is that they are a waste of a valuable resource. In the North Sea, fisheries discards are some of the highest in the world. Cod (Gadus morhua) has contributed considerably to the amount discarded. The declining cod stock within......, spatially and temporally, in discarding over the past decade while pinpointing the major reasons to why it occurs. We discuss how such information can be used to improve future fishing activities and their subsequent catch compositions under a discard...

  18. Could seals prevent cod recovery in the Baltic Sea?

    DEFF Research Database (Denmark)

    MacKenzie, Brian; Eero, Margit; Ojaveer, Henn

    2011-01-01

    Fish populations are increasingly affected by multiple human and natural impacts including exploitation, eutrophication, habitat alteration and climate change. As a result many collapsed populations may have to recover in ecosystems whose structure and functioning differ from those in which...... in an ecosystem that likely will change due to both the already started recovery of a cod predator, the grey seal Halichoerus grypus, and projected climate impacts. Simulation modelling, assuming increased seal predation, fishing levels consistent with management plan targets and stable salinity, shows...... these goals will also depend on how climate change affects cod recruitment....

  19. Recovery in eastern Baltic cod: is increased recruitment caused by decreased predation on early life stages?

    DEFF Research Database (Denmark)

    Neumann, Viola; Köster, Fritz; Schaber, M.;

    2014-01-01

    Cod (Gadus morhua) recruitment in the eastern Baltic Sea is influenced by predation on early life stages by sprat (Sprattus sprattus) and herring (Clupea harengus), which is considered as one of the mechanisms preventing cod recovery in the 1990s. In the light of improved cod recruitment in the s......Cod (Gadus morhua) recruitment in the eastern Baltic Sea is influenced by predation on early life stages by sprat (Sprattus sprattus) and herring (Clupea harengus), which is considered as one of the mechanisms preventing cod recovery in the 1990s. In the light of improved cod recruitment...

  20. Growth dynamics of saffron cod (Eleginus gracilis) and Arctic cod (Boreogadus saida) in the Northern Bering and Chukchi Seas

    Science.gov (United States)

    Helser, Thomas E.; Colman, Jamie R.; Anderl, Delsa M.; Kastelle, Craig R.

    2017-01-01

    Saffron cod (Eleginus gracilis) and Arctic cod (Boreogadus saida) are two circumpolar gadids that serve as critically important species responsible for energy transfer in Arctic food webs of the northern Bering and Chukchi Seas. To understand the potential effects of sea ice loss and warming temperatures on these species' basic life history, information such as growth is needed. Yet to date, limited effort has been dedicated to the study of their growth dynamics. Based on a large sample of otoliths collected in the first comprehensive ecosystem integrated survey in the northern Bering and Chukchi Seas, procedures were developed to reliably estimate age from otolith growth zones and were used to study the growth dynamics of saffron and Arctic cod. Annual growth zone assignment was validated using oxygen isotope signatures in otoliths and otolith morphology analyzed and compared between species. Saffron cod attained larger asymptotic sizes (L∞=363 mm) and achieved their maximum size at a faster rate (K=0.378) than Arctic cod (L∞=209 mm; K=0.312). For both species, regional differences in growth were found (pArctic cod grew to smaller asymptotic size but at faster rates in the more northerly central (L∞=197 mm;K=0.324) and southern Chukchi Sea (L∞=221 mm;K=0.297) when compared to the northern Bering Sea (L∞=266 mm;K=0.171), suggesting a possible cline in growth rates with more northerly latitudes. Comparison of growth to two periods separated by 30 years indicate that both species exhibited a decline in maximum size accompanied by higher instantaneous growth rates in more recent years.

  1. Fluorescence of muscle and connective tissue from cod and salmon

    DEFF Research Database (Denmark)

    Andersen, Charlotte Møller; Wold, J.P.

    2003-01-01

    Autofluorescence of salmon and cod muscle was measured and compared with autofluorescence of collagen type I and type V. Similarities between fluorescence of fish muscle and collagen were found in that the same peaks were obtained around 390, 430, and 480 nm, These similarities are supported by p...

  2. Modelling axisymmetric cod-ends made of different mesh types

    DEFF Research Database (Denmark)

    Priour, D.; Herrmann, Bent; O'Neill, F.G.

    2009-01-01

    Cod-ends are the rearmost part of trawl fishing gears. They collect the catch, and for many important species it is where fish selection takes place. Generally speaking they are axisymmetric, and their shape is influenced by the catch volume, the mesh shape, and the material characteristics. The ...

  3. Arctic Climate Change: A Tale of Two Cod Species

    Science.gov (United States)

    Arctic cod play an important role in the Arctic trophic hierarchy as the consumer of primary productivity and a food source for many marine fish and mammals. Shifts in their distribution and abundance could have cascading affects in the marine environment. This paper investigates...

  4. A staging system for larval cod (Gadus morhua L.)

    OpenAIRE

    1986-01-01

    A staging system of larval cod is described. The system is based on the resorption of the yolk mass and the cell layers surrounding it combined with eye, mouth and gut development. A determination key is given. Each stage is described in detail.

  5. Host size-dependent anisakid infection in Baltic cod Gadus morhua associated with differential food preferences

    DEFF Research Database (Denmark)

    Zuo, Shaozhi; Huwer, Bastian; Bahlool, Qusay

    2016-01-01

    for these parasites. Here, we report from an investigation of 368 cod (total length [TL] 6-49 cm; caught in ICES Subdivision 25) that the infection level of juvenile cod (TL 6-30 cm) with larvae of C. osculatum and P. decipiens is absent or very low, whereas it increases drastically in larger cod (TL 31-48 cm......). A third nematode Hysterothylacium aduncum was rarely found. The study indicates that the prey animals for large cod act as transport hosts for the parasite larvae. Analyses of stomach contents of cod caught in the same area (2007-2014) showed that small benthic organisms (including polychaetes Harmothoë...

  6. A sensometric approach to cod-quality measurement

    DEFF Research Database (Denmark)

    Jensen, H.S.; Jørgensen, Bo

    1997-01-01

    The quality index method was used for describing the sensory quality of thawed whole cod and raw fillet and the quality of boiled fillet was assessed by profiling analysis. These data were compared to the water holding capacity of the minced cod by principal component analysis (PCA) and partial...... least squares regression. The sensory data and the water holding capacity were correlated to an extent that made possible the prediction of high and low values of water holding capacity. Multivariate methods were also used for extracting some information about the assessor variability. This was done...... by determining the ability of the assessors to predict the water holding capacity through partial least squares regression and by examining the distances between PCA-models of profiling data from the single assessors. (C) 1997 Elsevier Science Ltd. All rights reserved....

  7. Isolation of putative probionts from cod rearing environment

    DEFF Research Database (Denmark)

    Lauzon, H.L.; Gudmundsdottir, S.; Pedersen, M.H.;

    2008-01-01

    , metabolite production and adhesion to fish cell lines. Our study demonstrated that 14% of screened bacteria (n = 188) had antagonistic properties towards fish pathogens. The majority of these isolates were Gram-positive (81%), belonging to Firmicutes (69.2%) and Actinobacteria (11.5%) phyla based on 16S r...... was designed to search for new probiotics to target this critical period in cod rearing. Potential probionts were selected from the naturalmicrobiota of cod aquacultural environment. The selection was based on several criteria: pathogen inhibition potential, growth characteristics, strain identification......RNA gene sequencing. Only 6 (3.2%) of 188 isolates could inhibit all three pathogens tested: Vibrio anguillarum, Aeromonas salmonicida subsp. achromogenes and Vibrio salmonicida. Differences observed in activity intensity and spectrum among inhibitory isolates emphasise the need to develop probiotic...

  8. Cape Cod Easterly Shore Beach Erosion Study. Volume 2

    Science.gov (United States)

    1979-04-01

    bacterial slimes. In addition, these structures might provide roosting and nesting sites for certain bird species. Proposed structural and non-structural...Charles E. McClenne, Associate Professor, Colgate University, dated 3 August 1977 Notes from visit to Cape Cod Easterly Shores Beach Erosion Control...ments should be supported by factual information insofar as practicable. Oral statements will be heard but, for accuracy of record, all important facts

  9. Effect of produced water on cod (Gadus morhua) immune responses

    Energy Technology Data Exchange (ETDEWEB)

    Hamoutene, D.; Mabrouk, G.; Samuelson, S.; Mansour, A.; Lee, K. [Fisheries and Oceans Canada, Dartmouth, NS (Canada). Maritimes Region, Ocean Sciences Division; Volkoff, H.; Parrish, C. [Memorial Univ. of Newfoundland, St. John' s, NL (Canada); Mathieu, A. [Oceans Ltd., St. John' s, NL (Canada)

    2007-07-01

    Studies have shown that produced water (PW) discharged from North Sea offshore platforms affects the biota at greater distances from operational platforms than originally presumed. According to PW dispersion simulations, dilution by at least 240 times occurs within 50-100 m, and up to 9000 times by 20 km from the discharge. In this study, the effect of PW on cod immunity was investigated by exposing fish to 0, 100 ppm (x 10,000 dilution) or 200 ppm (x 500) of PW for 76 days. Immune responses were evaluated at the end of the exposure. Fish from the 3 groups were injected with Aeromonas salmonicida lipopolysaccharides (LPS). Blood cell observation and flow cytometry were used to investigate the serum cortisol levels and gill histology along with ratios and respiratory burst (RB) responses of both circulating and head-kidney white blood cells (WBCs). The study revealed that baseline immunity and stress response were not affected by PW, other than an irritant-induced change in gill cells found in treated cod. In all groups, LPS injection resulted in a pronounced decrease in RB of head-kidney cells and an increase in serum cortisol and protein levels. However, the group exposed to 200 ppm of PW exhibited the most significant changes. LPS injection was also shown to influence WBC ratios, but further studies are needed to determine if this impact is stronger in fish exposed to PW. This study suggested an effect of PW on cod immunity after immune challenge with LPS.

  10. Removal of COD from laundry wastewater by electrocoagulation/electroflotation

    Energy Technology Data Exchange (ETDEWEB)

    Wang, C.-T. [Department of Safety Health and Environmental Engineering, Chung Hwa University of Medical Technology, Tainan County, Hsien 717, Taiwan (China)], E-mail: ctwwang@mail.hwai.edu.tw; Chou, W.-L. [Department of Safety Health and Environmental Engineering and Institute of Occupational Safety and Hazard Prevention, HungKuang University, Sha-Lu, Taichung 433, Taiwan (China); Kuo, Y.-M. [Department of Safety Health and Environmental Engineering, Chung Hwa University of Medical Technology, Tainan County, Hsien 717, Taiwan (China)

    2009-05-15

    The removal efficiency of COD in the treatment of simulated laundry wastewater using electrocoagulation/electroflotation technology is described. The experimental results showed that the removal efficiency was better, reaching to about 62%, when applying ultrasound to the electrocoagulation cell. The solution pH approached neutrality in all experimental runs. The optimal removal efficiency of COD was obtained by using the applied voltage of 5 V when considering the energy efficiency and the acceptable removal efficiency simultaneously. The Cl{sup -} concentration of less than 2500 ppm had a positive effect on the removal efficiency. The performance of the monopolar connection of electrodes was better than that of the bipolar connection in this work. In addition, the removal efficiency of using Al electrodes was higher in comparison with using Fe electrodes in the study. The highest COD removal amount per joule was found to be 999 mg dm{sup -3} kW h{sup -1} while using two Al electrodes, although the removal efficiency increased with the number of Al plates.

  11. Association between nematode Hysterothylacium aduncum invasion of cod larvae and growth

    DEFF Research Database (Denmark)

    Mehrdana, Foojan; Bahlool, Qusay Z. M.; Kuhn, Jesper;

    invertebrates and fish species and for some species also higher vertebrate hosts. We have recently demonstrated that fry of North Sea cod has a high prevalence of infection with regard to the nematode Hysterothylacium aduncum and it was indicated that these infections could affect survival of cod and thereby...... affect the cod stock in the North Sea. The objective of the present study was to elucidate if infections are associated with a decrease or an increase of fish size when examining fish of the same age. We investigated effects of H. aduncum infections on the growth rate of cod larvae by using the otolith...... reading method. In our study, the prevalence of infection with H. aduncum in North Sea cod Gadus morhua larvae was studied during the years 1992-2001. A subsample of 65 cod was selected based on the body length (range 20 to 45 mm) with 32 infected and 33 uninfected fishes. For ageing the cod larvae...

  12. Positive regulation of botulinum neurotoxin gene expression by CodY in Clostridium botulinum ATCC 3502.

    Science.gov (United States)

    Zhang, Zhen; Dahlsten, Elias; Korkeala, Hannu; Lindström, Miia

    2014-12-01

    Botulinum neurotoxin, produced mainly by the spore-forming bacterium Clostridium botulinum, is the most poisonous biological substance known. Here, we show that CodY, a global regulator conserved in low-G+C Gram-positive bacteria, positively regulates the botulinum neurotoxin gene expression. Inactivation of codY resulted in decreased expression of botA, encoding the neurotoxin, as well as in reduced neurotoxin synthesis. Complementation of the codY mutation in trans rescued neurotoxin synthesis, and overexpression of codY in trans caused elevated neurotoxin production. Recombinant CodY was found to bind to a 30-bp region containing the botA transcription start site, suggesting regulation of the neurotoxin gene transcription through direct interaction. GTP enhanced the binding affinity of CodY to the botA promoter, suggesting that CodY-dependent neurotoxin regulation is associated with nutritional status.

  13. COD::CIF::Parser: an error-correcting CIF parser for the Perl language.

    Science.gov (United States)

    Merkys, Andrius; Vaitkus, Antanas; Butkus, Justas; Okulič-Kazarinas, Mykolas; Kairys, Visvaldas; Gražulis, Saulius

    2016-02-01

    A syntax-correcting CIF parser, COD::CIF::Parser, is presented that can parse CIF 1.1 files and accurately report the position and the nature of the discovered syntactic problems. In addition, the parser is able to automatically fix the most common and the most obvious syntactic deficiencies of the input files. Bindings for Perl, C and Python programming environments are available. Based on COD::CIF::Parser, the cod-tools package for manipulating the CIFs in the Crystallography Open Database (COD) has been developed. The cod-tools package has been successfully used for continuous updates of the data in the automated COD data deposition pipeline, and to check the validity of COD data against the IUCr data validation guidelines. The performance, capabilities and applications of different parsers are compared.

  14. Inhibition of haemoglobin-mediated lipid oxidation in washed cod muscle and cod protein isolates by Fucus vesiculosus extract and fraction

    DEFF Research Database (Denmark)

    Wang, Tao; Jonsdottir, Rosa; Kristinsson, Hordur

    2010-01-01

    The effects of Fucus vesiculosus extract and fractions towards haemoglobin- (Hb-) catalysed lipid oxidation in washed cod muscle system and cod protein isolates during ice storage were examined. The extract and fractions were characterised in terms of total phlorotannin content (TPC), 2,2-diphenyl...

  15. Transcriptomic analysis and biomarkers (Rag1 and Igμ) for probing the immune system development in Pacific cod, Gadus macrocephalus.

    Science.gov (United States)

    Mao, Ming-Guang; Li, Xing; Perálvarez-Marín, Alejandro; Jiang, Jie-Lan; Jiang, Zhi-Qiang; Wen, Shi-Hui; Lü, Hui-Qian

    2015-06-01

    Mortality (>90%) is a big concern in larval rearing facilities of Pacific cod, Gadus macrocephalus, limiting its culture presently still in the experimental stages. Understanding the immune system development of G. macrocephalus is crucial to optimize the aquaculture of this species, to improve the use of economic resources and to avoid abuse of antibiotics. For the transcriptome analysis, using an Illumina sequencing platform, 61,775,698 raw reads were acquired. After a de novo assembly, 77,561 unigenes were obtained. We have classified functionally these transcripts by Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG). 27 genes mainly related to hematopoietic or lymphoid organ development and somatic diversification of immune receptors have been reported for the first time in Pacific cod, and 14 Ig heavy chain (μ chain) locuses were assembled using Trinity. Based on our previous achievement, we have chosen Rag1 and Igμ as immune system development biomarkers. Full length cDNA of Rag1 and Igμ as biomarkers were obtained respectively using RACE PCR. Concerning Rag1, the deduced amino acid of Rag1 and protein immunodetection revealed a Rag1 isoform of 69 kDa, significantly different from other fish orthologs, such as Oncorhynchus mykiss (121 kDa). Phylogenetic analysis reveals a unique immune system for the Gadus genre, not exclusive for Atlantic cod, among vertebrates. Meanwhile, full length cDNA of Igμ included an ORF of 1710 bp and the deduced amino acid was composed of a leader peptide, a variable domain, CH1, CH2, Hinge, CH3, CH4 and C-terminus, which was in accordance with most teleost. Absolute quantification PCR revealed that significant expression of Rag1 appeared earlier than Igμ, 61 and 95 dph compared to 95 dph, respectively. Here we report the first transcriptomic analysis of G. macrocephalus as the starting point for genetic research on immune system development towards improving the Pacific cod aquaculture.

  16. Atlantic Salmon Telemetry Monitoring

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Annual telemetry data are collected as part of specific projects (assessments within watersheds) or as opportunistic efforts to characterize Atlantic salmon smolt...

  17. Standardization of BOD₅/COD ratio as a biological stability index for MSW.

    Science.gov (United States)

    Cossu, Raffaello; Lai, Tiziana; Sandon, Annalisa

    2012-08-01

    The control of biodegradable substances is the key issue in evaluating the short and long-term emission potential and environmental impact of a landfill. Aerobic and anaerobic indices, such as respirometric index (RI) and biomethane potential production (GB21), can be used in the estimation of the stability of solid waste samples. Previous studies showed different degrees of relationship between BOD₅/COD ratio compared with RI4. Aim of this study is to standardize the parameter BOD₅/COD ratio and to test the methodology under different operating conditions (dynamic or static leaching and leaching duration, 6 and 24-h) keeping constant temperature and liquid/solid ratio (L/S=10 l/kg(TS)), with the introduction of a COD fractioning method. The COD fractioning is based on the differentiation between the soluble fraction (COD(sol)) and the colloidal fraction (COD(coll)) using a flocculation method. The BOD₅/COD and the BOD₅/COD(sol) indices are both consistent and significant and can be used as stability indices. The BOD₅/COD ratio does not seem to be influenced, for the same test duration, by the type of test, static or dynamic. In the same way the longer test duration (24-h) does not influence significantly the values of BOD₅/COD ratio. As a consequence a leaching test duration of 6-h is preferable to avoid the beginning of the hydrolysis and oxidation processes.

  18. Woman Swims Atlantic

    Institute of Scientific and Technical Information of China (English)

    贾庆文

    2009-01-01

    Jennifer Figge pressed her toes into the Caribbean sand, excited and exhausted as she touched land this week for the first time in almost a month. Reaching a beach in Trinidad, she became the first woman on record to s,Mm across the Atlantic Ocean-a dream she'd had since the early 1960s, when a stormy trans-Atlantic flight got her thinking she could wear a life vest and swim the rest of the way if needed.

  19. New type of canned cod gonads and liver pastes

    Directory of Open Access Journals (Sweden)

    Grokhovsky V. A.

    2016-09-01

    Full Text Available The urgency of rational way of processing the offal of the Gadidae family (liver and gonads for food purposes has been proved. The possibility of using the frozen gonads (milt and caviar and the liver of the cod in the human nutrition (especially for the people of elderly age has been researched. The frozen gonads with addition of fish liver are proven to be used for producing the canned foods with high quality level. The physical, chemical and microbiological characteristics of the product have been determined by the standardized methods. The quality level of canned foods has been obtained using the developed criteria of the objective evaluation of the quality. The specimens of the canned pastes produced from the frozen cod milt, caviar and liver using different compositions have been researched. Near-to-optimal composition of the new product has been defined. The quality level of canned food is 88.6 %. The commercial sterility of the canned food specimens prepared using the developed technology has been established. The chemical composition and the sensory characteristics of canned food have been researched. It has been established that protein content in the canned food is 12.9 %, fat content – 13.5 %, water content – 71.2 %, sodium chloride content – 1.3 %, carbohydrates content – 0.5 %. The product is the uniform, finely ground, evenly mixed mass with the presence of the separate caviar grains. The color of the paste is light-beige. The canned food has the tender consistency, pleasant taste and aroma. The energy value of the product is 678 kJ (162 kcal. Using the frozen cod caviar, milt and liver for producing the developed assortment of canned foods will make it possible to solve the problem of the complex processing of fish, and also to manufacture the canned food of high quality on the shore enterprises from the frozen fish offal (caviar, milt and liver all the year round.

  20. Eastern Baltic cod recruitment revisited—dynamics and impacting factors

    DEFF Research Database (Denmark)

    Köster, Fritz; Huwer, Bastian; Hinrichsen, Hans-Harald

    2016-01-01

    and casting doubts about the magnitude of the recent increase in recruitment. Earlier studies identified main factors impacting on cod reproductive success to be related to the loss of two out of three spawning areas in the 1980s caused by lack of major Baltic inflows with a concurrent reduction in salinity...... and oxygen. Other important factors include prey availability for first-feeding larvae, egg predation by sprat and herring and cannibalism on juveniles, all in one way or the other related to the prevailing hydrographic conditions. These factors cannot explain increased reproductive success in the last...

  1. Suitability of otolith microchemistry for stock separation of Baltic cod

    DEFF Research Database (Denmark)

    Heidemann, F; Marohn, L; Hinrichsen, HH

    2012-01-01

    differences between individuals from the eastern and the western Baltic Sea and between North Sea and Baltic Sea samples. Sr/Ca, Ba/Ca, Y/Ca, Mg/Ca, Zr/Ca and Mn/Ca ratios had the strongest discriminatory power. A further separation of individuals caught in 3 different spawning grounds of the eastern Baltic......, however, was not possible. Elemental compositions from the core regions of otoliths from young of the year cod caught in eastern and western Baltic Sea spawning grounds showed significant differences in Sr/Ca, Ba/Ca and Mg/Ca concentrations. Analyses of similarities again showed significant differences...

  2. Host size-dependent anisakid infection in Baltic cod Gadus morhua associated with differential food preferences

    DEFF Research Database (Denmark)

    Zuo, Shaozhi; Huwer, Bastian; Bahlool, Qusay;

    2016-01-01

    A significant increase in the infection level of Baltic cod Gadus morhua with the anisakid nematode larvae Contracaecum osculatum and Pseudoterranova decipiens has been recorded during recent years due to the expanding local population of grey seals Halichoerus grypus, which act as final hosts fo....... One cannot exclude the possibility that the size-dependent C. osculatum infection of cod may contribute (indirectly or directly) to the differential mortality of larger cod (>38 cm) compared to smaller cod (...... sarsi) are preferred food items by small cod, the isopod Saduria entomon is taken by all size classes, and sprat Sprattus sprattus are common prey items for cod larger than 30 cm. Parasitological investigations (microscopic and molecular analyses) of H. sarsi (100 specimens) and S. entomon (40 specimens...

  3. DEVELOPMENT OF TECHNOLOGY FOR FISH CANNED PATE'S COD-FISH SPECIES

    OpenAIRE

    A. A. Efremova; L. K. Kuranova; O. A. Nikolaenko

    2014-01-01

    Summary. Fish and seafood play an important role in a balanced diet. The most reliable method of preservation is the production of canned fish. Cod fishery considered traditional objects of the North Basin, which catches in recent years stored at a consistently high level. They are represented, mainly cod, haddock, pollack, whiting. Lately there has been a tendency to increase yield loaves (polar bib). The aim of this work - the development of technology - canned pate's cod fish species with ...

  4. COD::CIF::Parser: an error-correcting CIF parser for the Perl language

    OpenAIRE

    Merkys, Andrius; Vaitkus, Antanas; Butkus, Justas; Okulič-Kazarinas, Mykolas; Kairys, Visvaldas; Gražulis, Saulius

    2016-01-01

    A syntax-correcting CIF parser, COD::CIF::Parser, is presented that can parse CIF 1.1 files and accurately report the position and the nature of the discovered syntactic problems. In addition, the parser is able to automatically fix the most common and the most obvious syntactic deficiencies of the input files. Bindings for Perl, C and Python programming environments are available. Based on COD::CIF::Parser, the cod-tools package for manipulating the CIFs in the Crystallogra...

  5. Warm, windy winters drive cod north and homing of spawners keeps them there

    DEFF Research Database (Denmark)

    Rindorf, Anna; Lewy, Peter

    2006-01-01

    and larval phases of cod led to a northward shift in the distribution of juvenile North Sea cod the following year. A concomitant northern shift of mature fish around the time of spawning was linked directly to a tendency for northerly distributed juveniles to remain northerly throughout their life...... of older age groups. Unless a series of cold and calm years combined with a reduced mortality in the southern areas allows a southern spawning population to rebuild, the cod stock is unlikely to return to its previous area of distribution. Furthermore, protecting adult cod mainly in northern areas...

  6. Nutritional condition and vertical distribution of Baltic cod larvae

    DEFF Research Database (Denmark)

    Grønkjær, P.; Clemmesen, C.; St. John, Michael

    1997-01-01

    Newly hatched Baltic cod Gadus morhua larvae are typically found at depths >60 m. This is a region of low light and prey availability, hence generating the hypothesis that larvae have to migrate from hatching depth to the surface layer to avoid starvation and improve their nutritional condition....... To lest this hypothesis, Baltic cod larvae were sampled during the spawning seasons of 1994 and 1995 with depth-resolving multiple opening/closing nets. Each larva was aged by otolith readings and its RNA/DNA ratio was determined as a measure of nutritional condition. The RNA/DNA ratios of these larvae...... aged 2-25 days (median 10 days) ranged from 0.4 to 6.2, corresponding to levels exhibited by starving and fast growing larvae in laboratory calibration studies (starvation, protein growth rate, G(pi)=-12.2% day(-1); fast-growing larvae, G(pi)=14.1% day(-1)) respectively. Seventy per cent of the field...

  7. 75 FR 57698 - Atlantic Highly Migratory Species; Atlantic Billfish Management, White Marlin (Kajikia albidus

    Science.gov (United States)

    2010-09-22

    ... western Atlantic Ocean, white marlin and blue marlin from the North Atlantic Ocean, and longbill spearfish from the entire Atlantic Ocean; described objectives for the Atlantic billfish fishery; and established... Conservation of Atlantic Tunas (ICCAT). Currently, Atlantic billfish managed by NMFS include Atlantic...

  8. Atlantic menhaden adult tagging study

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Atlantic menhaden are a schooling forage fish species, which are subject to a large commercial purse seine fishery. Atlantic menhaden are harvested for reduction...

  9. North Atlantic Circulation

    Science.gov (United States)

    Molinari, R.; Bryan, K.; Schott, F.

    The intensity of the North Atlantic winddriven and thermohaline circulation and the close proximity of many oceanographic installations make the North Atlantic a particularly favored region of the world ocean from the standpoint of research in ocean circulation. Recent increases in available data and advances in numerical modeling techniques served as the impetus to convene a joint workshop of modelers and observers working on the North Atlantic with the Scientific Committee on Oceanic Research (SCOR) Working Group (WG) 68 (“North Atlantic Circulation”). Goals of the workshop were to provide an update on data sets and models and to discuss the poleward heat flux problem and possible monitoring strategies. The joint Workshop/SCOR WG-68 meeting was convened by F. Schott (chairman of the working group; Rosenstiel School of Marine and Atmospheric Science, Miami, Fla.), K. Bryan (National Oceanic and Atmospheric Administration/ Geophysical Fluid Dynamics Laboratory (NOAA/GFDL)), and R. Molinari (NOAA/Atlantic Oceanographic and Meteorological Laboratory (NOAA/AOML)).

  10. L’écodéveloppement participatif en question

    Directory of Open Access Journals (Sweden)

    Lucie Dejouhanet

    2010-03-01

    Full Text Available Si les politiques forestières indiennes ont évolué d’un paradigme directif à un paradigme participatif, les aires protégées sont encore gérées par des textes de loi qui privilégient la séparation entre activités humaines et espaces à protéger. L’écodéveloppement, soutenu par la Banque Mondiale, se voulait un moyen de favoriser des activités alternatives à l’exploitation des ressources et de faire participer les populations à la protection de leur environnement. Lancé en 2001 dans la réserve naturelle de Parambikulam au Kérala, ses résultats quelques années après sont peu concluants. Alors qu’un rapport de 2003 accuse le délitement social des populations concernées, cet article insiste davantage sur l’inadaptation des projets des comités d’écodéveloppement au contexte des villages ; le cliché essentialiste attaché aux populations adivasi constitue une vision a-historique qui ne permet pas de penser le développement aujourd’hui. L’écodéveloppement, s’il veut atteindre ses objectifs, doit permettre une réelle négociation entre acteurs des aires protégées et proposer des compromis réalistes entre limitation des activités et survie des populations.While Indian forest policies have evolved from a directive paradigm to a participative one, protected areas are still managed by legislative acts, which advocate a clear separation between human activities and areas to be protected. Eco-development financed by the World Bank was planned as a tool for developing alternative activities to resource exploitation and for involving local populations in environment protection through participation. Started in 2001 in the Wildlife Sanctuary of Parambikulam in Kerala, its results few years after are rather inconclusive. While a report in 2003 was accusing the social disintegration of concerned people, I am more stressing on the inappropriateness of EDC to villages’ context. The essentialist clich

  11. Cod and rainbow trout as freeze-chilled meal elements

    DEFF Research Database (Denmark)

    Jensen, Louise Helene Søgaard; Nielsen, Jette; Jørgensen, Bo

    2010-01-01

    Meal elements' are elements of a meal, e.g. portions of pre-fried meat, sauces, frozen fish or pre-processed vegetables typically prepared industrially. The meal elements are distributed to professional satellite kitchens, where the staff can combine them into complete meals. Freeze...... and cod and rainbow trout seem potential candidates for freeze-chilled meal elements. (C) 2009 Society of Chemical Industry......-chilling is a process consisting of freezing and frozen storage followed by thawing and chilled storage. Combining the two would enable the manufacturer to produce large quantities of frozen meal elements to be released into the chill chain according to demand. We have studied the influence of freeze...

  12. Lessons for fisheries management from the EU cod recovery plan

    DEFF Research Database (Denmark)

    Kraak, S.B.M.; Bailey, N.; Cardinale, M.;

    2013-01-01

    Member States to 'buy back' or increase fishing effort for fleet segments engaged in cod-avoidance measures. The stipulated fishing mortality reductions have not been achieved. On the positive side, the 'buy-back' instrument has led to increased uptake of selective gear and implementation of permanent...... in targeted fisheries, although fishers experienced them as prohibiting the full uptake of other quotas. Recommendations for future plans include (i) management through catch rather than landings quotas, (ii) the internalisation of the costs of exceeding quotas, (iii) use of more selective gear types, (iv......) the development of appropriate metrics as a basis for regulatory measures and for evaluations, (v) participatory governance, (vi) fishery-based management, (vii) flexibility in fishing strategy at vessel level...

  13. Preparation, characterization, and in vitro cytotoxicity of COM and COD crystals with various sizes.

    Science.gov (United States)

    Sun, Xin-Yuan; Ouyang, Jian-Ming; Liu, Ai-Jie; Ding, Yi-Ming; Gan, Qiong-Zhi

    2015-12-01

    Calcium oxalate crystals in urine often differ in size and crystal phase between healthy humans and patients with kidney stones. In this work, calcium oxalate monohydrate (COM) and dihydrate (COD) with sizes of about 50 nm, 100 nm, 1 μm, 3 μm, and 10 μm were prepared by varying reactant concentration, reaction temperature, solvent, mixing manner, and stirring speed. These crystals mainly had a smooth surface and no obvious pore structure, except COM-1 μm. In cell culture medium, the zeta potential of crystals became increasingly negative with increasing size, and the absolute value of zeta potential of COD was greater than the same-sized COM. Results of cell viability and PI staining assays showed that the order of injury degree in African green monkey renal epithelial (Vero) cells caused by different sizes of COD was COD-50 nm>COD-100 nm>COD-1 μm>COD-3 μm>COD-10 μm, and that of different sizes of COM was COM-1 μm>COM-50~COM-100 nm>COM-3 μm>COM-10 μm. COM-1 μm presented the highest cytotoxicity in Vero cells, which was associated with its rougher surface, larger specific surface area (SBET), and larger pore volume. Overall, these findings indicated that the physical properties of crystals play an important role in their cytotoxicity.

  14. [Omega-3: from cod-liver oil to nutrigenomics].

    Science.gov (United States)

    Caramia, G

    2008-08-01

    The leading role of cod-liver oil on rickets was a relevant factor in the knowledge of this disease. In 1922 the preventive and therapeutic value of cod-liver oil and sunlight against rickets in young infants was confirmed. The seasonal variation in the incidence of rickets, the role of skin pigmentation, of diet and the fact that breast milk was not an adequate source of vitamin D were understood. The discovery of essential fatty acids omega-6 and omega-3 have shown that deficiencies, mainly of omega-3 long chain polyunsaturated fatty acids, result in visual and cognitive impairment and disturbances in mental functions in infants and also in cognitive function in adults, as fatty acids are beneficial to vascular health and may forestall cerebrovascular disease and thus dementia. An adequate ratio of n-6 and n-3 fatty acids may promote a healthier balance of eicosanoids, which would protect membrane function with a nutraceutical function. Dietary lipids not only influence the biophysical state of the cell membranes but, via direct and indirect routes, they also act on multiple pathways including signalling, gene and protein activities, protein modifications and they probably play important role in modulating protein aggregation. Significant advances have been made in understanding the relation between dietary factors and inflammation, which is a central component of many chronic diseases, including coronary artery disease, rheumatoid arthritis, cancer prevention. However, the identification of those who will or will not benefit from dietary intervention strategies remains a major obstacle. Adequate knowledge about how the responses depend on an individual's genetic background (nutrigenetic effects), the cumulative effects of food components on genetic expression profiles through nutrigenomics mechanism, may assist in identifying responders and non-responders. Thus, fish and fish oil consumption might encourage brain development and gene expression to brain

  15. Long-term effects of the transient COD concentration on the performance of microbial fuel cells.

    Science.gov (United States)

    Mateo, S; Gonzalez Del Campo, A; Lobato, J; Rodrigo, M; Cañizares, P; Fernandez-Morales, F J

    2016-07-08

    In this work, the long-term effects of transient chemical oxygen demands (COD) concentrations over the performance of a microbial fuel cell were studied. From the obtained results, it was observed that the repetitive change in the COD loading rate during 12 h conditioned the behavior of the system during periods of up to 7 days. The main modifications were the enhancement of the COD consumption rate and the exerted current. These enhancements yielded increasing Coulombic efficiencies (CEs) when working with COD concentrations of 300 mg/L, but constant CEs when working with COD concentrations from 900 to 1800 mg/L. This effect could be explained by the higher affinity for the substrate of Geobacter than that of the nonelectrogenic organisms such as Clostridia. © 2016 American Institute of Chemical Engineers Biotechnol. Prog., 32:883-890, 2016.

  16. [Influence of substrate COD on methane production in single-chambered microbial electrolysis cell].

    Science.gov (United States)

    Teng, Wen-Kai; Liu, Guang-Li; Luo, Hai-Ping; Zhang, Ren-Duo; Fu, Shi-Yu

    2015-03-01

    The chemical oxygen demand (COD) of substrate can affect the microbial activity of both anode and cathode biofilm in the single-chamber methanogenic microbial electrolysis cell (MEC). In order to investigate the effect of COD on the performance of MEC, a single chamber MEC was constructed with biocathode. With the change of initial concentration of COD (700, 1 000 and 1 350 mg x L(-1)), the methane production rate, COD removal and energy efficiency in the MEC were examined under different applied voltages. The results showed that the methane production rate and COD removal increased with the increasing COD. With the applied voltage changing from 0.3 to 0.7 V, the methane production rate increased at the COD of 700 mg x L(-1), while it increased at first and then decreased at the COD of 1000 mg x L(-1) and 1350 mg x L(-1). A similar trend was observed for the COD removal. The cathode potential reached the minimum (- 0.694 ± 0.001) V as the applied voltage was 0.5 V, which therefore facilitated the growth of methanogenic bacteria and improved the methane production rate and energy efficiency of the MEC. The maximum energy income was 0.44 kJ ± 0.09 kJ (1450 kJ x m(-3)) in the MEC, which was obtained at the initial COD of 1000 mg x L(-1) and the applied voltage of 0.5 V. Methanogenic MECs could be used for the treatment of wastewaters containing low organic concentrations to achieve positive energy production, which might provide a new method to recover energy from low-strength domestic wastewater.

  17. Micro geographical population structure of cod Gadus morhua in the North Sea and west of Scotland: the role of sampling loci and individuals

    DEFF Research Database (Denmark)

    Eg Nielsen, Einar; Wright, Peter John; Hansen, Jakob Hemmer;

    2009-01-01

    We investigated potential microgeographical population structure among spatial and temporal samples of cod Gadus morhua L., collected in the northern North Sea and around Scotland, using microsatellite genetic markers. Results were highly dependent on the samples and microsatellite loci included...... isolation of 2 samples collected at Viking and pairwise grouping of temporal adult samples from the same location. On a northeast Atlantic regional scale, inferences on local populations and patterns of population structuring were more robust to the inclusion of the microsatellite under selection. Our....... Analysis of molecular variance (AMOVA) revealed significant spatial (p = 0.04) and temporal (p = 0.02) variance when including samples of juveniles and the microsatellite Gmo 132, which is known to be subject to selection. However, neither spatial nor temporal variance components were significant (p = 0...

  18. EPISODIC EOLIAN SAND DEPOSITION IN THE PAST 4000 YEARS IN CAPE COD NATIONAL SEASHORE, MASSACHUSETTS, USA IN RESPONSE TO POSSIBLE HURRICANE/STORM AND ANTHROPOGENIC DISTURBANCES

    Directory of Open Access Journals (Sweden)

    Steven L. Forman

    2015-02-01

    Full Text Available The eolian sand depositional record for a dune field within Cape Cod National Seashore, Massachusetts is posit as a sensitive indicator of environmental disturbances in the late Holocene from a combination of factors such as hurricane/storm and forest fire occurrence, and anthropogenic activity. Stratigraphic and sedimentologic observations, particularly the burial of spodosol-like soils, and associated 14C and OSL ages that are concordant indicate at least six eolian depositional events at ca. 3750, 2500, 1800, 960, 430 and <250 years ago. The two oldest events are documented at just one locality and thus, the pervasiveness of this eolian activity is unknown. However, the four younger events are identified in three or more sites and show evidence for dune migration and sand sheet accretion. The timing of eolian deposition, particularly the initiation age, corresponds to documented periods of increased storminess/hurricane activity in the North Atlantic Ocean at ca. 2.0 to 1.6, and 1.0 ka and also a wetter coastal climate, which suppressed the occurrence of forest fire. Thus, local droughts are not associated with periods of dune movement in this mesic environment. Latest eolian activity on outer Cape Cod commenced in the past 300 to 500 years and may reflect multiple factors including broad-scale landscape disturbance with European colonization, an increased incidence of forest fires and heightened storminess. Eolian systems of Cape Cod appear to be sensitive to landscape disturbance and prior to European settlement may reflect predominantly hurricane/storm disturbance, despite generally mesic conditions in past 4 ka.

  19. Structural and biophysical analysis of interactions between cod and human uracil-DNA N-glycosylase (UNG) and UNG inhibitor (Ugi)

    Energy Technology Data Exchange (ETDEWEB)

    Assefa, Netsanet Gizaw [UiT The Arctic University of Norway, 9037 Tromsø (Norway); Niiranen, Laila [UiT The Arctic University of Norway, 9037 Tromsø (Norway); University of Turku, FIN-20014 Turku (Finland); Johnson, Kenneth A.; Leiros, Hanna-Kirsti Schrøder; Smalås, Arne Oskar; Willassen, Nils Peder [UiT The Arctic University of Norway, 9037 Tromsø (Norway); Moe, Elin, E-mail: elin.moe@uit.no [UiT The Arctic University of Norway, 9037 Tromsø (Norway); Universidade Nova de Lisboa, Avenida da Republica (EAN), 2780-157 Oeiras (Portugal)

    2014-08-01

    A structural and biophysical study of the interactions between cod and human uracil-DNA N-glycosylase (UNG) and their inhibitor Ugi is presented. The stronger interaction between cod UNG and Ugi can be explained by a greater positive electrostatic surface potential. Uracil-DNA N-glycosylase from Atlantic cod (cUNG) shows cold-adapted features such as high catalytic efficiency, a low temperature optimum for activity and reduced thermal stability compared with its mesophilic homologue human UNG (hUNG). In order to understand the role of the enzyme–substrate interaction related to the cold-adapted properties, the structure of cUNG in complex with a bacteriophage encoded natural UNG inhibitor (Ugi) has been determined. The interaction has also been analyzed by isothermal titration calorimetry (ITC). The crystal structure of cUNG–Ugi was determined to a resolution of 1.9 Å with eight complexes in the asymmetric unit related through noncrystallographic symmetry. A comparison of the cUNG–Ugi complex with previously determined structures of UNG–Ugi shows that they are very similar, and confirmed the nucleotide-mimicking properties of Ugi. Biophysically, the interaction between cUNG and Ugi is very strong and shows a binding constant (K{sub b}) which is one order of magnitude larger than that for hUNG–Ugi. The binding of both cUNG and hUNG to Ugi was shown to be favoured by both enthalpic and entropic forces; however, the binding of cUNG to Ugi is mainly dominated by enthalpy, while the entropic term is dominant for hUNG. The observed differences in the binding properties may be explained by an overall greater positive electrostatic surface potential in the protein–Ugi interface of cUNG and the slightly more hydrophobic surface of hUNG.

  20. 78 FR 59878 - Atlantic Highly Migratory Species; Commercial Atlantic Aggregated Large Coastal Shark (LCS...

    Science.gov (United States)

    2013-09-30

    ... Species; Commercial Atlantic Aggregated Large Coastal Shark (LCS), Atlantic Hammerhead Shark, Atlantic Blacknose Shark, and Atlantic Non-Blacknose Small Coastal Shark (SCS) Management Groups AGENCY: National... hammerhead sharks in the Atlantic region, and blacknose sharks and non-blacknose SCS in the Atlantic...

  1. Slave to the rhythm: seasonal signals in otolith microchemistry reveal age of eastern Baltic cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Hüssy, Karin; Gröger, J.; Heidemann, F.

    2016-01-01

    Annual growth zones in cod otoliths from the eastern Baltic stock are less discrete than in other cod stocks leading to biased age reading, which recently led to a failure of age-based assessment in the eastern Baltic cod stock. In this study, we explored the applicability of minor and trace elem...

  2. A review of the battle for food in the Barents Sea: Cod vs. marine mammals

    Directory of Open Access Journals (Sweden)

    Bjarte eBogstad

    2015-03-01

    Full Text Available Cod, harp seal and minke whale are the main top predators in the Barents Sea ecosystem. In the last decade, the abundance of cod has increased considerably, and is at a record high level. In spite of this, the growth and condition of cod has remained rather stable, although some decrease is seen in size at age of large, mature cod. During the same period, the abundance of harp seals has declined whereas the minke whale stock has been at a stable level. The body condition (blubber thickness of these two mammal stocks has, however, decreased, with the strongest decrease observed for harp seals. A possible hypothesis for explaining this is that cod outperform the marine mammal stocks in the competition for food. The main advantages for cod are most likely larger availability of food (mainly capelin during winter-spring than for marine mammals, as well as a wider range of prey species being available to cod than to marine mammals. Harp seals are more dependent on prey items found close to the ice edge than the other two predator stocks are, which could partly explain why the performance of harp seals is worse than that of the two other main top predators in the area.

  3. Penentuan Kadar COD (Chemical Oxygen Demand) Pada Limbah Cair Pabrik Kelapa Sawit, Pabrik Karet Dan Domestik

    OpenAIRE

    Nurhasanah

    2009-01-01

    Telah dilakukan penentuan kadar COD pada limbah cair pabrik kelapa sawit, industri karet, dan domestik dengan metode titrimetri. Dari hasil analisa COD diperoleh kadar limbah kelapa sawit sebesar 206,33mg/l, limbah industri karet sebesar 31,74 mg/l, dan limbah domestik sebesar 162,68 mg/l. dimana menurut Standart baku mutu yang telah ditetapkan oleh Menteri Lingkungan Hidup Nomor: Kep-51/MENLH/10/1995, kadar maksimum COD dalam air limbah industri kelapa sawit sebesar 350 mg/l, dalam indust...

  4. Mapping the spawning grounds of North Sea cod ( Gadus morhua ) by direct and indirect means

    DEFF Research Database (Denmark)

    Fox, C.J.; Taylor, M.; Dickey-Collas, M.

    2008-01-01

    Despite recent evidence for sub-stock structuring, North Sea cod are assessed as a single unit. As a consequence, knowledge of sub-stock trends is poor. In particular, there are no recent evaluations of which spawning grounds are active. Here we report results from the first ichthyoplankton survey...... with known spawning locations from the period 1940 to 1970. We were, however, unable to directly detect significant numbers of cod eggs at the historic spawning ground off Flamborough (northeast coast of England). The results demonstrate that most of the major spawning grounds of cod in the North Sea...

  5. Sensory characteristics of different cod products related to consumer preferences and attitudes

    DEFF Research Database (Denmark)

    Sveinsdottir, K.; Martinsdottir, E.; Green-Petersen, Ditte

    2009-01-01

    to fish consumption, attitudes and preferences of the eight cod products. However, it was demonstrated that within each country, different segments of consumers existed with different preferences, motives/barriers and demographic background. The results indicated various potential to increase fish...... the liking in terms of different consumer attitudes and demographics. The QDA discriminated well between the products. The farmed cod products Were considerably different from wild cod, with More light and even colour, meaty texture, odour and flavour. Country differences were considerable with regard...

  6. Atlantic Oceanographic and Meteorological Laboratory

    Data.gov (United States)

    Federal Laboratory Consortium — The Atlantic Oceanographic and Meteorological Laboratory conducts research to understand the physical, chemical, and biological characteristics and processes of the...

  7. Thawed cod fillets spoil less rapidly than unfrozen fillets when stored under modified atmosphere at 2 C

    DEFF Research Database (Denmark)

    Guldager, H.S.; Bøknæs, Niels; Østerberg, Carsten

    1998-01-01

    The effect of two months of frozen storage at -20 degrees C on the spoilage characteristics and shelf life of thawed and modified atmosphere packed (MAP) cod fillets stored at 2 degrees C was studied. Thawed MAP cod fillets were compared with fresh cod fillets stored in CO2-containing modified...... as reflected both in chemical analyses and sensory evaluation. In contrast to fresh MAP cod fillets no significant production of trimethylamine occurred and almost no amine odor and taste were detected during 20 days of chill storage of thawed MAP cod fillets. The use of frozen fillets as raw material not only...

  8. Two Distinct Roles of Atlantic SSTs in ENSO Variability: North Tropical Atlantic SST and Atlantic Nino

    Science.gov (United States)

    Ham, Yoo-Geun; Kug, Jong-Seong; Park, Jong-Yeon

    2013-01-01

    Two distinct roles of the Atlantic sea surface temperatures (SSTs), namely, the North Tropical Atlantic (NTA) SST and the Atlantic Nino, on the El Nino-Southern Oscillation (ENSO) variability are investigated using the observational data from 1980 to 2010 and coupled model experiments. It appears that the NTA SST and the Atlantic Nino can be used as two independent predictors for predicting the development of ENSO events in the following season. Furthermore, they are likely to be linked to different types of El Nino events. Specifically, the NTA SST cooling during February, March, and April contributes to the central Pacific warming at the subsequent winter season, while the negative Atlantic Nino event during June, July, and August contributes to enhancing the eastern Pacific warming. The coupled model experiments support these results. With the aid of a lagged inverse relationship, the statistical forecast using two Atlantic indices can successfully predict various ENSO indices.

  9. Early life of key fish species, capelin Mallotus villosus and Atlantic cod Gadus morhua, in West Greenland

    DEFF Research Database (Denmark)

    Malanski, Evandro

    feeding on prey sizes of about 5% of their own size (Paper I) and consequently the prey preference spectra covered calanoid nauplii, cladocerans and calanoid copepodites with increasing larval size. In the Godthåbsfjord system and Fyllas Bank area, 4 hydrographic zones were defined; in each zone distinct...... is linked to the break-up of ice cover and the subsequent irradiance increase in the water column, climatic changes in Arctic regions could lead to a mismatch between larval emergence and optimal conditions for their feeding and growth. Thus it would be feasible to investigate the capelin stock genetic...

  10. Growth of juvenile Atlantic cod Gadus morhua in land-based recirculation systems: Effects of feeding regime, photoperiod and diet

    DEFF Research Database (Denmark)

    Fülberth, Michael; Moran, Damian; Jarlbæk, Henrik;

    2009-01-01

    . Three RAS units were used to simultaneously test three feed/photoperiod regimes that might be encountered in the wild or aquaculture; LightDark (LD) 24:0, LD12:11 (+ 1 h crepuscular periods) and LD6:6 (+ 12 h crepuscular periods). Feed was administered during the light period every 30 min for a 3 min...... feeding duration. In each RAS unit three diets (A, B and C) were tested, which were broadly similar in composition but from different manufacturers. Water exchange rate averaged 10–19% in the three recirculation systems, and key water quality parameters such as NH4+ and CO2 remained at low effect...

  11. Bioassay-derived dioxin equivalent concentrations in gonads and livers of the Atlantic cod females from the Baltic Sea

    NARCIS (Netherlands)

    Dabrowska, H.; Murk, A.J.; Berg, van den J.H.J.

    2010-01-01

    The DR-H4IIE.Luc bioassay is based on the ability of dioxin and dioxin-like contaminants to activate the AhR and its signal transduction pathway, a mechanism through which these contaminants elicit their toxic effects. The bioassay was used to examine the total dioxin-equivalent (TEQ) toxicity in go

  12. The effect of temperature and body size on metabolic scope of activity in juvenile Atlantic cod Gadus morhua L

    DEFF Research Database (Denmark)

    Tirsgaard, Bjørn; Behrens, Jane; Steffensen, John Fleng

    2015-01-01

    Changes in ambient temperature affect the physiology and metabolism and thus the distribution of fish. In this study we used intermittent flow respirometry to determine the effect of temperature (2, 5, 10, 15 and 20 °C) and wet body mass (BM) (~30–460 g) on standard metabolic rate (SMR, mg O2 h−1...

  13. Microgeographical population structure and adaptation in Atlantic cod Gadus morhua: spatio-temporal insights from gene-associated DNA markers

    DEFF Research Database (Denmark)

    Poulsen, Nina Aagaard; Hemmer-Hansen, Jakob; Loeschcke, V.;

    2011-01-01

    Recent technical advances have stimulated studies on spatial scales of adaptive genetic variation in marine fishes. However, very few studies have combined spatial and temporal sampling to investigate adaptive genetic structuring at local and microgeographical scales, i.e. scales at which neutral...

  14. Reconstructing historical stock development of Atlantic cod (Gadus morhua) in the eastern Baltic Sea before the beginning of intensive exploitation

    DEFF Research Database (Denmark)

    Eero, Margit; Köster, Fritz; MacKenzie, Brian

    2008-01-01

    mortality before the 1940s was below 0.2, but reached moderate levels during the Second World War. The stock size before the war may be considered as a reference level of biomass at low fishing impact, providing important information for the management of fisheries and the Baltic ecosystem....

  15. Characterization of Francisella sp., GM2212, the first Francisella isolate from marine fish, Atlantic cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Ottem, Karl F; Nylund, Are; Karlsbakk, Egil

    2007-01-01

    from F. tularensis and F. philomiragia. GM2212(T) is catalase-positive, indole positive, oxidase-negative, do not produce H(2)S in Triple Sugar Iron agar, and does not hydrolyze gelatin, is resistant to erythromycin and susceptible to ceftazidime, the latter five characteristics separating it from F...

  16. Effects of reproduction on growth and survival in Atlantic cod, Gadus morhua, assessed by comparison to triploids

    DEFF Research Database (Denmark)

    Trippel, Edward A.; Butts, Ian; Babin, Amanda;

    2014-01-01

    . years, but there was at age 3. years. At age 2. years, low investment in reproduction likely accounted for the lack of a somatic cost of reproduction, whereas at age 4 the absence was associated with heightened growth post-spawning enabling mature fish to catch up to immature fish. At age 3......, compensatory growth during post-spawning was below that of immature fish. Survival represented a significant component of the cost of reproduction. Laboratory experiments examining the cost of reproduction have traditionally focused on shorter time periods, commonly spanning several months, whereas ours...... spanned nearly four years. Although previously done for bivalves, to our knowledge, this is the first time the cost of reproduction has been evaluated using triploid fish as a comparator...

  17. Microevolution in time and space: SNP analysis of historical DNA reveals dynamic signatures of selection in Atlantic cod

    DEFF Research Database (Denmark)

    Therkildsen, Nina Overgaard; Hansen, Jakob Hemmer; Als, Thomas Damm

    2013-01-01

    Little is known about how quickly natural populations adapt to changes in their environment and how temporal and spatial variation in selection pressures interact to shape patterns of genetic diversity. We here address these issues with a series of genome scans in four overfished populations...

  18. Large effective population size and temporal genetic stability in Atlantic cod (Gadus morhua) in the southern Gulf of St. Lawrence

    DEFF Research Database (Denmark)

    Therkildsen, Nina Overgaard; Eg Nielsen, Einar; Swain, Douglas P.

    2010-01-01

    Worldwide, many commercial fish stocks have experienced dramatic declines due to overfishing. Such fisheries-induced population reductions could potentially erode the genetic diversity of marine fish populations. Based on analyses of DNA extracted from archived and contemporary samples, this paper...

  19. Theoretical study of the effect of round straps on the selectivity in a diamond mesh cod-end

    DEFF Research Database (Denmark)

    Herrmann, Bent; Priour, D.; Krag, Ludvig Ahm

    2006-01-01

    FEMNET, a numerical tool based on the finite element method, was applied to estimate the shapes of various diamond-mesh cod-end designs during fishing. The only design differences rest in the use of round straps of different lengths, positions and numbers. The cod-end shape estimates were...... then entered in the selectivity simulation tool PRESEMO to simulate the selectivity processes of the various cod-end designs under the same varying fishing conditions. This enabled us to demonstrate how one or two round straps along the cod-end axis may change the selectivity of the cod-end compared...... with a reference cod-end, without round straps. We predict that in cod-end designs, which comply with the EU legislation, the 50% retention length (L50) may be reduced by up to 1.5 cm (5%) for haddock....

  20. Trimmed Processed Continuous Resistivity Point Data from Cape Cod National Seashore, May 17-20, 2004

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Continuous resistivity profiling (CRP) surveys were conducted at Cape Cod National Seashore in 2004 and 2006 in order to test hypotheses about groundwater flow...

  1. Trimmed Processed Continuous Resistivity Point Data from Cape Cod National Seashore, Feb. 28, 2006

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Continuous resistivity profiling (CRP) surveys were conducted at Cape Cod National Seashore in 2004 and 2006 in order to test hypotheses about groundwater flow...

  2. Processed Continuous Resistivity Point Data from Cape Cod National Seashore, May 17-20, 2004

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Continuous resistivity profiling (CRP) surveys were conducted at Cape Cod National Seashore in 2004 and 2006 in order to test hypotheses about groundwater flow...

  3. Processed Continuous Resistivity Point Data from Cape Cod National Seashore, Feb. 28, 2006

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Continuous resistivity profiling (CRP) surveys were conducted at Cape Cod National Seashore in 2004 and 2006 in order to test hypotheses about groundwater flow...

  4. Continuous Resistivity Profile Tracklines of Data Collected from Cape Cod National Seashore, Feb. 28, 2006

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Continuous resistivity profiling (CRP) surveys were conducted at Cape Cod National Seashore in 2004 and 2006 in order to test hypotheses about groundwater flow...

  5. AFSC/REFM: Pacific cod genetics in the Aleutian Islands 2004-2007

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Landscape genetics of Pacific cod Gadus macrocephalus within the Bering Sea and Aleutian Islands (BSAI) management area of Alaska was examined in samples from nine...

  6. Surficial Sediment Distributions off Eastern Cape Cod, Massachusetts (CC_SEDDIST.SHP, Geographic, WGS84)

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This data set shows the distribution of surficial sediments offshore of northern and eastern Cape Cod, Massachusetts. This interpretation is based on data collected...

  7. AFSC/RACE/GAP/Nichol: Archival tag depth and temperature data from Pacific cod

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Data from 250 recaptured (624 released) depth and temperature recording archival (data storage) tags attached to Pacific cod off Kodiak Island and in the eastern...

  8. Coastal Vulnerability Index (CVI) for Cape Cod National Seashore (caco_shore)

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — A coastal vulnerability index (CVI) was used to map the relative vulnerability of the coast to future sea-level rise within Cape Cod National Seashore in...

  9. 77 FR 9852 - Special Regulations; Areas of the National Park System, Cape Cod National Seashore

    Science.gov (United States)

    2012-02-21

    .... DATES: This rule is effective March 22, 2012. FOR FURTHER INFORMATION CONTACT: Craig Thatcher, Acting... primary authors of this regulation were Craig Thatcher, Acting Chief Ranger, Cape Cod National...

  10. Trimmed Processed Continuous Resistivity Point Data from Cape Cod National Seashore, May 17-20, 2004

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Continuous resistivity profiling (CRP) surveys were conducted at Cape Cod National Seashore in 2004 and 2006 in order to test hypotheses about groundwater flow under...

  11. Processed Continuous Resistivity Point Data from Cape Cod National Seashore, May 17-20, 2004

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Continuous resistivity profiling (CRP) surveys were conducted at Cape Cod National Seashore in 2004 and 2006 in order to test hypotheses about groundwater flow under...

  12. Bedrock Data from Western Cape Cod, Massachusetts (WELLSITE shapefile, Geographic, NAD27)

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Cores collected from recent drilling in western Cape Cod, Massachusetts provide insight into the topography and petrology of the underlying bedrock. Cores from 64...

  13. Continuous Resistivity Profile Tracklines of Data Collected from Cape Cod National Seashore, Feb. 28, 2006

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Continuous resistivity profiling (CRP) surveys were conducted at Cape Cod National Seashore in 2004 and 2006 in order to test hypotheses about groundwater flow under...

  14. Processed Continuous Resistivity Point Data from Cape Cod National Seashore, Feb. 28, 2006

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Continuous resistivity profiling (CRP) surveys were conducted at Cape Cod National Seashore in 2004 and 2006 in order to test hypotheses about groundwater flow under...

  15. Trimmed Processed Continuous Resistivity Point Data from Cape Cod National Seashore, Feb. 28, 2006

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Continuous resistivity profiling (CRP) surveys were conducted at Cape Cod National Seashore in 2004 and 2006 in order to test hypotheses about groundwater flow under...

  16. Groundwater contributing areas for Cape Cod and the Plymouth-Carver Regions of Massachusetts

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This data layer contains groundwater contributing areas for streams, ponds and estuaries in the Cape Cod and the Plymouth-Carver region. Contributing areas were...

  17. Linking lipid dynamics with the reproductive cycle in Baltic cod Gadus morhua

    DEFF Research Database (Denmark)

    Røjbek, Maria; Jacobsen, Charlotte; Tomkiewicz, Jonna;

    2012-01-01

    This study describes lipid composition and antioxidants of Baltic cod Gadus morhua L. during the reproductive cycle, and investigates whether they reflect its dominant prey and whether levels of fatty acids important for reproductive performance were low. Reasons for a shift in peak spawning time...... of Baltic cod from spring/early summer to midsummer since the early 1990s remain unresolved and may partly be diet related. This study demonstrated that a substantial amount of lipid was invested in cod ovarian development, and that lipid composition varied substantially with the reproductive cycle...... ovaries and decreased in late maturing and spawning fish, most likely due to their antioxidant protection activity. The fatty acid composition of cod liver reflected its clupeid prey. The ratio of 18:1n-9 to DHA was almost twice as high in sprat as in herring and indicated the ratio of sprat and herring...

  18. COD and Color Removal from Textile Wastewater Using Rosa damascena Watering Waste Ash

    Directory of Open Access Journals (Sweden)

    Rabbani D.1 PhD,

    2015-01-01

    Full Text Available Aims Several methods have been used for textile wastewater treatment. The aim of this study was to evaluate the efficiency of Rosa damascena watering waste ash for COD and color removal from textile wastewater. Materials & Methods Rose watering waste was gathered from one of the Kashan processing plants. The raw wastewater sample was taken from one of the textile industries in Kashan countryside. All experiments were run in the fixed volume (1L of textile wastewater, contact times (15, 30, 45, 60, 75, and 90min, pHs (3, 5, 7, and 9 and different doses of rose watering waste (500, 1000, 2000, and 4000mg at the room temperature (25°C. Moreover, biosorption kinetic studies for COD were done using the pseudo first and pseudo second order models. Findings The amount of COD and color removal were increased by contact time increasing from 15 to 60min and the maximum removal of COD (50.3% and color (31.4% were seen at minute 60. Therefore, the contact time of 60min was chosen as the optimum contact time for the first step. The maximum amount of COD (51.9% and color (32.9% removal were seen at pH=5 and biosorbent dose of 2000mg. Changes at pH and biosorbent dose had significant effects (p<0.05 on amount of COD and color removal. Conclusion The optimum condition for removing COD and color from textile wastewater is at contact time 60min, pH=5 and biosorbent dose of 2000mg. Rosa damascena watering waste ash was more effective on the COD removal than the color.

  19. Photocatalysis applied in the studies of decolorization and COD removal of landfill leachate

    Directory of Open Access Journals (Sweden)

    Gisselma Batista

    2014-10-01

    Full Text Available In this paper photocatalysis processes on titanium dioxide suspension in aqueous solution illuminated with UV light are described for decolorization and Chemical Oxygen Demand (COD removal of landfill leachate. Several operational parameters to achieve optimum efficiency are presented. The properties of the decolorization and COD removal were enhanced and studied by spectrophotometer methods. The results indicate that the process can be used as a pretreatment to the conventional processes.

  20. Removal of Sulfide and COD from a Crude Oil Wastewater Model by Aluminum and Iron Electrocoagulation

    Directory of Open Access Journals (Sweden)

    K. I. Dermentzis

    2016-04-01

    Full Text Available The treatment of petroleum wastewater was studied using the electrocoagulation process with aluminum and iron electrodes aiming to simultaneous removal of sulfide and COD. All affecting parameters, such as solution pH, applied current density, time of electroprocessing, electrode material and addition of surfactant, were investigated. Sulfide was rapidly and effectively removed using iron electrodes. The removal of COD was effectively effectively enhanced by performing the electrocoagulation process after addition of the surfactant polyethylene glycol oleate.

  1. Removal of Sulfide and COD from a Crude Oil Wastewater Model by Aluminum and Iron Electrocoagulation

    OpenAIRE

    K. I. Dermentzis

    2016-01-01

    The treatment of petroleum wastewater was studied using the electrocoagulation process with aluminum and iron electrodes aiming to simultaneous removal of sulfide and COD. All affecting parameters, such as solution pH, applied current density, time of electroprocessing, electrode material and addition of surfactant, were investigated. Sulfide was rapidly and effectively removed using iron electrodes. The removal of COD was effectively effectively enhanced by performing the electrocoagulation ...

  2. Monitoring sodium chloride during cod fish desalting process by flow injection spectrometry and infrared spectroscopy

    OpenAIRE

    Galvis-Sánchez, Andrea C.; Ildikó V. Tóth; Portela, Ana; Delgadillo, Ivonne; Rangel,António O. S. S.

    2011-01-01

    In order to adapt to the market trends that are moving towards ready-to-use products cod !sh industry is including into their industrial operations as the desalting step. The desalting process is a high cost and time demanding operation. The optimization of the desalting process is of vital importance for the !sh industry in order to assure the homogeneity and predictable concentration of sodium chloride in the !nal hydrated cod !sh product. On the other hand, consumers are more a...

  3. Effect of wastewater COD/N ratio on aerobic nitrifying sludge granulation and microbial population shift

    Institute of Scientific and Technical Information of China (English)

    Lei Wu; Chengyao Peng; Yongzhen Peng; Lingyun Li; Shuying Wang; Yong Ma

    2012-01-01

    The effect of COD/N ratio on the granulation process and microbial population succession was investigated.Four identical sequencing batch reactors,R1,R2,R3 and R4,were operated with various initial COD/N ratios ranging from 0/200 to 800/200 (m/n).Ethanol was fed as the source of COD.Aerobic granules were successfully cultivated in R2 and R3,operating with the COD/N ratio of 200/200 and 400/200,respectively.Scanning electron microscope observations indicated that short rod-shaped and spherical bacteria were dominant in R2,while granules produced in R3 were surrounded with a large amount of filamentous bacteria.The average specific nitritation rate in R2 and R3 were 0.019 and 0.008 mg N/(mg MLVSS.hr),respectively.Fluorescence in situ hybridization results demonstrated that nitrifying bacteria population was enriched remarkably in R2.It indicated that nitrification ability and nitrifying bacteria population were enriched remarkably at low COD/N ratio.However,no granules were formed in R1and R4 which might attribute to either limited or excessive extracellular polymeric substances production.This study contributed to a better understanding of the role of COD/N ratio in nitrifying sludge granulation.

  4. Emissions Analysis of Regional COD in Yuanbao District Dandong City%丹东市元宝区区域 COD 排放量分析

    Institute of Scientific and Technical Information of China (English)

    张璐

    2012-01-01

    COD total emissions come mainly from industrial pollution sources and domestic pollution sources in Yuanbao District. Among them, industrial pollution sources produce COD of 140817a and emissions of 235.82T/a; domestic pollution sources produce COD of 6330.52T/a and emissions of 4657.96 T/a Through the investigation of pollution sources, the emissions of COD were analyzed in Yuanbao District, in order to better control and manage environmental pollution.%元宝区COD的总量排放主要来自工业源和生活源,其中工业源COD产生量为1408 T/a、排放量为235.82 T/a;生活源COD产生量为6330.52 T/a、排放量为4657.96 T/a.通过污染源调查,分析元宝区污染物COD排放情况,以利于今后更好地控制和管理环境污染.

  5. Effects of COD to Phosphorus Ratios on the Metabolism of PAOs in Enhanced Biological Phosphorus Removal with Different Carbon Sources

    Institute of Scientific and Technical Information of China (English)

    Tao Jiang; Junguo He; Xiaonan Yang; Jianzheng Li

    2015-01-01

    To elucidate the phosphorus removal and metabolism under various COD/P ratio, a sludge highly enriched in PAOs was used to investigate the impacts of COD/P in batch tests under different carbon supply conditions. Acetate, propionate and a mixture of acetate and propionate at a ratio of 3 ∶ 1 ( COD basis) was used as carbon sources with the COD/P of 20, 15,10 and 5�0 gCOD/gP, respectively. The minimum COD/P ratios for complete P removal were found to be 8�24 gCOD/gP for acetate, 11�40 gCOD/gP for propionate and 9�10 gCOD/gP for the 3 ∶ 1 mixture of acetate and propionate. Converted to a mass basis, all three cases had a very similar ratio of 7�7 gVFA/gP, which represented a useful guide for operation of EBPR plants to identify possible shortages inVFAs. The trend in PHV accumulation during the anaerobic period along with the decrease of COD/P ratios suggested that, PAOs may use the TCA pathway for anaerobic VFA uptake to maintain the required NADH production with reduced glycogen degradation. During the aerobic phase, the glycogen pool was reduced but remained enough compared to the requirement for anaerobic VFA uptake, and the synthesis and degradation of glycogen was not the inhibition factor of PAOs.

  6. Dispersal routes and habitat utilization of juvenile Atlantic bluefin tuna, Thunnus thynnus, tracked with mini PSAT and archival tags.

    Directory of Open Access Journals (Sweden)

    Benjamin Galuardi

    Full Text Available Between 2005 and 2009, we deployed 58 miniature pop-up satellite archival tags (PSAT and 132 implanted archival tags on juvenile Atlantic bluefin tuna (age 2-5 in the northwest Atlantic Ocean. Data returned from these efforts (n = 26 PSATs, 1 archival tag revealed their dispersal routes, horizontal and vertical movements and habitat utilization. All of the tagged bluefin tuna remained in the northwest Atlantic for the duration observed, and in summer months exhibited core-use of coastal seas extending from Maryland to Cape Cod, MA, (USA out to the shelf break. Their winter distributions were more spatially disaggregated, ranging south to the South Atlantic Bight, northern Bahamas and Gulf Stream. Vertical habitat patterns showed that juvenile bluefin tuna mainly occupied shallow depths (mean= 5-12 m, sd = 15-23.7 m and relatively warm water masses in summer (mean= 17.9-20.9°C, sd= 4.2-2.6°C and had deeper and more variable depth patterns in winter (mean= 41-58 m, sd= 48.9-62.2 m. Our tagging results reveal annual dispersal patterns, behavior and oceanographic associations of juvenile Atlantic bluefin tuna that were only surmised in earlier studies. Fishery independent profiling from electronic tagging also provide spatially and temporally explicit information for evaluating dispersals rates, population structure and fisheries catch patterns.

  7. 78 FR 64199 - Fisheries of the South Atlantic; South Atlantic Fishery Management Council; Public Meeting

    Science.gov (United States)

    2013-10-28

    .... SUMMARY: The South Atlantic Fishery Management Council's (Council) Scientific and Statistical Committee... Atlantic Fishery Management Council; Public Meeting AGENCY: National Marine Fisheries Service (NMFS...: (800) 445-8667 or (843) 308- 9330. Council address: South Atlantic Fishery Management Council,...

  8. 76 FR 57709 - Atlantic Highly Migratory Species; Atlantic Shark Management Measures

    Science.gov (United States)

    2011-09-16

    ... Species; Atlantic Shark Management Measures AGENCY: National Marine Fisheries Service (NMFS), National... Atlantic shark landings; request for comments. SUMMARY: This notice announces the National Marine Fisheries... Atlantic shark fisheries. NMFS published an Advanced Notice of Proposed Rulemaking (ANPR) on September...

  9. An ethogram of body patterning behavior in the biomedically and commercially valuable squid Loligo pealei off Cape Cod, Massachusetts.

    Science.gov (United States)

    Hanlon, R T; Maxwell, M R; Shashar, N; Loew, E R; Boyle, K L

    1999-08-01

    Squids have a wide repertoire of body patterns; these patterns contain visual signals assembled from a highly diverse inventory of chromatic, postural, and locomotor components. The chromatic components reflect the activity of dermal chromatophore organs that, like the postural and locomotor muscles, are controlled directly from the central nervous system. Because a thorough knowledge of body patterns is fundamental to an understanding of squid behavior, we have compiled and described an ethogram (a catalog of body patterns and associated behaviors) for Loligo pealei. Observations of this species were made over a period of three years (> or = 440 h) and under a variety of behavioral circumstances. The natural behavior of the squid was filmed on spawning grounds off Cape Cod (northwestern Atlantic), and behavioral trials in the laboratory were run in large tanks. The body pattern components--34 chromatic (including 4 polarization components), 5 postural, and 12 locomotor--are each described in detail. Eleven of the most common body patterns are also described. Four of them are chronic, or long-lasting, patterns for crypsis; an example is Banded Bottom Sitting, which produces disruptive coloration against the substrate. The remaining seven patterns are acute; they are mostly used in intraspecific communication among spawning squids. Two of these acute patterns--Lateral Display and Mate Guarding Pattern--are used during agonistic bouts and mate guarding; they are visually bright and conspicuous, which may subject the squids to predation; but we hypothesize that schooling and diurnal activity may offset the disadvantage presented by increased visibility to predators. The rapid changeability and the diversity of body patterns used for crypsis and communication are discussed in the context of the behavioral ecology of this species.

  10. Structure of the Branched-chain Amino Acid and GTP-sensing Global Regulator, CodY, from Bacillus subtilis*

    Science.gov (United States)

    Levdikov, Vladimir M.; Blagova, Elena; Young, Vicki L.; Belitsky, Boris R.; Lebedev, Andrey; Sonenshein, Abraham L.

    2017-01-01

    CodY is a branched-chain amino acid (BCAA) and GTP sensor and a global regulator of transcription in low G + C Gram-positive bacteria. It controls the expression of over 100 genes and operons, principally by repressing during growth genes whose products are required for adaptations to nutrient limitation. However, the mechanism by which BCAA binding regulates transcriptional changes is not clear. It is known that CodY consists of a GAF (cGMP-stimulated phosphodiesterases, adenylate cyclases, FhlA) domain that binds BCAAs and a winged helix-turn-helix (wHTH) domain that binds to DNA, but the way in which these domains interact and the structural basis of the BCAA dependence of this interaction are unknown. To gain new insights, we determined the crystal structure of unliganded CodY from Bacillus subtilis revealing a 10-turn α-helix linking otherwise discrete GAF and wHTH domains. The structure of CodY in complex with isoleucine revealed a reorganized GAF domain. In both complexes CodY was tetrameric. Size exclusion chromatography with multiangle laser light scattering (SEC-MALLS) experiments showed that CodY is a dimer at concentrations found in bacterial cells. Comparison of structures of dimers of unliganded CodY and CodY-Ile derived from the tetramers showed a splaying of the wHTH domains when Ile was bound; splaying is likely to account for the increased affinity of Ile-bound CodY for DNA. Electrophoretic mobility shift and SEC-MALLS analyses of CodY binding to 19–36-bp operator fragments are consistent with isoleucine-dependent binding of two CodY dimers per duplex. The implications of these observations for effector control of CodY activity are discussed. PMID:28011634

  11. The effect of pH and operation mode for COD removal of slaughterhouse wastewater with Anaerobic Batch Reactor (ABR

    Directory of Open Access Journals (Sweden)

    Maria Octoviane Dyan

    2015-01-01

    Full Text Available Disposal of industrial wastes in large quantities was not in accordance with today's standards of waste into environmental issues that must be overcome with proper treatment. Similarly, the abattoir wastewater that contains too high organic compounds and suspended solids. The amount of liquid waste disposal Slaughterhouse (SW with high volume also causes pollution. The research aim to resolve this problem by lowering the levels of BOD-COD to comply with effluent quality standard. Anaerobic process is the right process for slaughterhouse wastewater treatment because of high content of organic compounds that can be utilized by anaerobic bacteria as a growth medium. Some research has been conducted among abattoir wastewater treatment using anaerobic reactors such as ABR, UASB and ASBR. Our research focuses on the search for the optimum results decline effluent COD levels to match the quality standards limbah and cow rumen fluid with biodigester ABR (Anaerobic Batch Reactor. The variables used were PH of 6, 7, and 8, as well as the concentration ratio of COD: N is 400:7; 450:7, and 500:7. COD value is set by the addition of N derived from urea [CO(NH2 2]. COD levels will be measured daily by water displacement technique. The research’s result for 20 days seen that optimum PH for biogas production was PH 7,719 ml. The optimum PH for COD removal is PH 6, 72.39 %. The operation mode COD:N for biogas production and COD removal is 500:7, with the production value is 601 ml and COD removal value is 63.85 %. The research’s conclusion, the PH optimum for biogas production was PH 7, then the optimum PH for COD removal is PH 6. The optimum operation mode COD:N for biogas production and COD removal was 500:7

  12. PENURUNAN BOD DAN COD LIMBAH CAIR INDUSTRI TEKSTIL DI KABUPATEN PEKALONGAN DENGAN METODE MULTI SOIL LAYERING

    Directory of Open Access Journals (Sweden)

    Irmanto

    2008-11-01

    Full Text Available Multi Soil Layering (MSL system is a method of wastewater treatment that increase the soils function to purify wastewater. In the construction of MSL, soils mixed with the charcoal and then filled into the box of size 50x14x50 cm in layers structured like brick pattern. The aims of this research are to determine the concentration of BOD and COD on textile industrial wastewater before and after the process by MSL method. It also determines the optimal loading rate of wastewater on the MSL system, and then it can determine the efficiency of MSL system on reducing the concentration of BOD and COD on textile industrial wastewater. The method which used in this research is an experimental method. The wastewater on the MSL system is loaded on the loading rate variety: 160, 320, 480, 640, and 800 L m-2 day-1. The efficiency of MSL system to removing BOD and COD on textile industrial wastewater are determined on optimal loading rate. The research gave result that MSL method could remove BOD and COD on textile industrial wastewater on the optimal loading rate 320 L m-2 day-1. The efficiency of MSL system in removing BOD and COD on textile industrial wastewater are 96.52 and 80.87% respectively. This indicated that the method MSL serve the purpose of effective alternative method in processing of liquid waste textile industry.

  13. Relationships between water quality parameters in rivers and lakes: BOD5, COD, NBOPs, and TOC.

    Science.gov (United States)

    Lee, Jaewoong; Lee, Seunghyun; Yu, Soonju; Rhew, Doughee

    2016-04-01

    Biological oxygen demand (BOD5) or chemical oxygen demand (COD) analysis is widely used to evaluate organic pollutants in water systems as well as the efficiency of wastewater treatment plants. However, both analysis methods have restrictions such as being insensitive, imprecise, time-consuming, and the production of chemical waste. Therefore, total organic carbon (TOC) analysis for organic pollutants has been considered for an alternative analysis instead of BOD5 or COD. Several studies have investigated the replacement of BOD5 or COD with TOC in wastewater samples; however, few studies have investigated the relationships between water quality parameters in rivers and lakes. Therefore, this study evaluated the relationships between BOD5, COD, or NBOPs and TOC by the analysis of national water quality monitoring data of rivers and lakes for 5 years. High correlation coefficients (r) of 0.87 and 0.66 between BOD5 and TOC (p TOC (p TOC was 0.93 for rivers and 0.72 for lakes. The coefficients of determination (R 2) were 0.75 and 0.44 between BOD5 and TOC for rivers and lakes as well as were 0.87 and 0.57 between COD and TOC for rivers and lakes, respectively. The coefficient of determination (R 2) between NBOPs and TOC was 0.73 for rivers and 0.52 for lakes.

  14. COD fractions of leachate from aerobic and anaerobic pilot scale landfill reactors

    Energy Technology Data Exchange (ETDEWEB)

    Bilgili, M. Sinan [Yildiz Technical University, Environmental Engineering Department, 34349 Besiktas, Istanbul (Turkey)], E-mail: mbilgili@yildiz.edu.tr; Demir, Ahmet [Yildiz Technical University, Environmental Engineering Department, 34349 Besiktas, Istanbul (Turkey)], E-mail: ahmetd@yildiz.edu.tr; Akkaya, Ebru [Yildiz Technical University, Environmental Engineering Department, 34349 Besiktas, Istanbul (Turkey)], E-mail: ekoca@yildiz.edu.tr; Ozkaya, Bestamin [Yildiz Technical University, Environmental Engineering Department, 34349 Besiktas, Istanbul (Turkey)], E-mail: bozkaya@yildiz.edu.tr

    2008-10-01

    One of the most important problems with designing and maintaining a landfill is managing leachate that generated when water passes through the waste. In this study, leachate samples taken from aerobic and anaerobic landfill reactors operated with and without leachate recirculation are investigated in terms of biodegradable and non-biodegradable fractions of COD. The operation time is 600 days for anaerobic reactors and 250 days for aerobic reactors. Results of this study show that while the values of soluble inert COD to total COD in the leachate of aerobic landfill with leachate recirculation and aerobic dry reactors are determined around 40%, this rate was found around 30% in the leachate of anaerobic landfill with leachate recirculation and traditional landfill reactors. The reason for this difference is that the aerobic reactors generated much more microbial products. Because of this condition, it can be concluded that total inert COD/total COD ratios of the aerobic reactors were 60%, whereas those of anaerobic reactors were 50%. This study is important for modeling, design, and operation of landfill leachate treatment systems and determination of discharge limits.

  15. Mapping the spawning grounds of North Sea cod (Gadus morhua) by direct and indirect means.

    Science.gov (United States)

    Fox, Clive J; Taylor, Martin; Dickey-Collas, Mark; Fossum, Petter; Kraus, Gerd; Rohlf, Norbert; Munk, Peter; van Damme, Cindy J G; Bolle, Loes J; Maxwell, David L; Wright, Peter J

    2008-07-07

    Despite recent evidence for sub-stock structuring, North Sea cod are assessed as a single unit. As a consequence, knowledge of sub-stock trends is poor. In particular, there are no recent evaluations of which spawning grounds are active. Here we report results from the first ichthyoplankton survey to cover the whole North Sea. Also, this survey, conducted in 2004, was the first to make extensive use of DNA-based molecular methods to unambiguously identify early developmental stage cod eggs. We compare the findings from the plankton survey with estimated egg production inferred from the distribution of mature cod in contemporaneous trawl surveys. Results from both approaches were in general agreement and showed hot spots of egg production around the southern and eastern edges of the Dogger Bank, in the German Bight, the Moray Firth and to the east of the Shetlands. These areas broadly coincide with known spawning locations from the period 1940 to 1970. We were, however, unable to directly detect significant numbers of cod eggs at the historic spawning ground off Flamborough (northeast coast of England). The results demonstrate that most of the major spawning grounds of cod in the North Sea are still active but that some localized populations may have been reduced to the point where it is now difficult to detect the presence of eggs in the plankton.

  16. Atlantic Offshore Seabird Dataset Catalog

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Several bureaus within the Department of Interior compiled available information from seabird observation datasets from the Atlantic Outer Continental Shelf into a...

  17. Atlantic Flyway Breeding Waterfowl Survey

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — The Atlantic Flyway Technical Section initiated this breeding waterfowl survey in 11 northeast states ranging from New Hampshire to Virginia.

  18. Atlantic Flyway Sea Duck Survey

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — The Atlantic Flyway Sea Duck Survey, conducted from 1991 to 2002 by the U.S. Fish and Wildlife Service, was established to record sea duck numbers using near shore...

  19. Virginia Atlantic Coast Recreational Use

    Data.gov (United States)

    Virginia Department of Environmental Quality — As a member of the Mid-Atlantic Regional Council on the Ocean (MARCO), Virginia, through its Coastal Zone Management (CZM) Program, collected information on how the...

  20. VA Atlantic Coast Recreational Use

    Data.gov (United States)

    Virginia Department of Environmental Quality — As a member of the Mid-Atlantic Regional Council on the Ocean (MARCO), Virginia, through its Coastal Zone Management (CZM) Program, collected information on how the...

  1. 75 FR 52478 - Fisheries of the Exclusive Economic Zone Off Alaska; Reallocation of Pacific Cod in the Bering...

    Science.gov (United States)

    2010-08-26

    ... fisheries data in a timely fashion and would delay the reallocation of Pacific cod specified from trawl.... Carrie Selberg, Acting Director, Office of Sustainable Fisheries, National Marine Fisheries...

  2. The North Atlantic Cold Bias

    Science.gov (United States)

    Greatbatch, Richard; Drews, Annika; Ding, Hui; Latif, Mojib; Park, Wonsun

    2016-04-01

    The North Atlantic cold bias, associated with a too zonal path of the North Atlantic Current and a missing "northwest corner", is a common problem in coupled climate and forecast models. The bias affects the North Atlantic and European climate mean state, variability and predictability. We investigate the use of a flow field correction to adjust the path of the North Atlantic Current as well as additional corrections to the surface heat and freshwater fluxes. Results using the Kiel Climate Model show that the flow field correction allows a northward flow into the northwest corner, largely eliminating the bias below the surface layer. A surface cold bias remains but can be eliminated by additionally correcting the surface freshwater flux, without adjusting the surface heat flux seen by the ocean model. A model version in which only the surface fluxes of heat and freshwater are corrected continues to exhibit the incorrect path of the North Atlantic Current and a strong subsurface bias. Removing the bias impacts the multi-decadal time scale variability in the model and leads to a better representation of the SST pattern associated with the Atlantic Multidecadal Variability than the uncorrected model.

  3. The Static Research on Adsorption Characteristics and Removal Efficiency of COD by Different Zeolite Substrates in Biogas Slurry%不同沸石材料对沼液中 COD 静态吸附去除的研究

    Institute of Scientific and Technical Information of China (English)

    邢赜; 陈玉成; 熊佰炼; 陈瑶; 常琛

    2013-01-01

    The COD was high in concentric biogas slurry which contained plenty of organic nutrients .To search for excel-lent COD adsorption substrates ,both the thermo-dynamics adsorption-desorption characteristics of COD by five common substrates (Natural zeolite(TRF),microwave-sodium chloride modified zeolite(WLF),cetylpyridinium Bromize modified zeolite(CPBF),micro-sized zeolite(WF)and submicro-sized zeolite(YWF)synthesized from coal fly ash) were illustra-ted in laboratory .The results indicated that CPBF had higher adsorption capacities and velocities of COD and lower COD desorption efficiencie than other zeolite substrates which means it could be excellent COD adsorption substrate .%集中型沼液由于含有较丰富的有机营养成分, COD 负荷较高。为了寻找高效 COD 吸附基质,以天然斜发沸石( TRF )、微波与氯化钠联合改性沸石( WLF )、CPB 改性沸石( CPBF )、微米级( WF )以及亚微米级( YWF )两种粉煤灰合成沸石为研究对象,对沼液COD 的热力学吸附解吸进行研究。结果表明,与其他4种沸石材料相比, CPBF 具有更高的 COD 吸附量和吸附速率以及更低的解吸率,因此具有较大的沼液 COD 吸附优势,是优良的吸附材料。

  4. Improved management based on stock identification of eastern and western Baltic cod

    DEFF Research Database (Denmark)

    Hüssy, Karin; Bastardie, Francois; Eero, Margit;

    ) within the “Western” cod’s management unit was documented using high-powered genetic tools. The majority (91%) of all spawning fish caught in SD 24 in 2011 were “Eastern” cod and only 9% were from the “Western” stock. The results suggest that the stock structure in the Arkona Basin is highly influenced...... with a change in “Eastern” cod’s spawning behaviour. Management: The stock mixing proportions were successfully implemented in DTU Aqua’s modeling framework for management scenarios. “Eastern” immigrants into SD 24 lead the management procedure to advice for higher TACs that enhance the pressure on the fishing......The objective of this project was to establish an empirically founded knowledge base for the sustainable exploitation of the western Baltic cod stock by including the complex stock structure and migration patterns. Stock mapping: Extensive immigration of “Eastern” cod into the Arkona Basin (SD 24...

  5. COD Removal Efficiencies of Some Aromatic Compounds in Supercritical Water Oxidation

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    Some aromatic compounds, phenol, aniline and nitrobenzene, were oxidized in supercritical water. It was experimentally found that the chemical oxygen demand (COD) removal efficiency of these organic compounds can achieve a high level more than 90% in a short residence time at temperatures high enough. As temperature, pressure and residence time increase, the COD removal efficiencies of the organic compounds would all increase. It is also found that temperature and residence time offer greater influences on the oxidation process than pressure. The difficulty in oxidizing these three compounds is in the order of nitrobenzene > aniline > Phenol. In addition, it is extremely difficult to oxidize aniline and nitrobenzene to CO2 and H2O at the temperature lower than 873.15 K and 923.15 K, respectively. Only at the temperature higher than 873.15 K and 923.15 K, respectively, the COD removal efficiencies of 90% of aniline and nitrobenzene can be achieved.

  6. Study on Migration and Transformation Rule of Organic Pollutants (COD) in Aerated Zone

    Institute of Scientific and Technical Information of China (English)

    2003-01-01

    Collecting waste water with a certain concentration of organic pollutants COD (chemical oxygen demand), static adsorption, static biodegradation and dynamic soil column experiments were made in laboratory, we researched migration and transformation of COD in aerated zone, and put forward a mathematical model showing the process. The results show that adsorption of organism in aerated zone is linear, which is represented by Henry's law s=Kdc+sd, adsorption coefficient Kd =0. 069 3;biodegradation diagram accord basically with first-order kinetics equation c=c0e-K1t , biodegradation coefficient K1 = 0. 049 9 d-1; dispersion coefficient D= 0. 002 42 m2/d in experiments. The migration and transformation of organic pollutants (COD) in aerated zone jointly result from many factors such as dispersion, adsorption and biodegradation etc..

  7. Regulation of the organic pollution level in anaerobic digesters by using off-line COD measurements.

    Science.gov (United States)

    Méndez-Acosta, H O; García-Sandoval, J P; González-Álvarez, V; Alcaraz-González, V; Jáuregui-Jáuregui, J A

    2011-09-01

    A sampled delayed scheme is proposed to regulate the organic pollution level in anaerobic digestion processes by using off-line COD measurements. The proposed scheme is obtained by combining an error feedback control with a steady state estimator to track constant references and attenuate process load disturbances. The controller performance is tested experimentally for the treatment of tequila vinasses over a period of 68days under different set-point values and several uncertain scenarios which include badly known kinetic parameters and load disturbances. Experimental results show that the COD concentration can be effectively regulated under the influence of set-point changes and high load disturbances by using only a daily off-line COD measurement, which makes the industrial application of the proposed control scheme feasible.

  8. Impact of hypoxia on consumption of Baltic cod in a multispecies stock assessment context

    DEFF Research Database (Denmark)

    Teschner, E.C.; Kraus, G.; Neuenfeldt, Stefan

    2010-01-01

    for organisms living under these conditions. For cod e.g. a direct relationship between oxygen availability and food intake with a decreasing ingestion rate at hypoxia could be revealed. In the present study, the effects of oxygen deficiency on consumption rates were investigated and how these translate...... to stock size estimates in multi-species models. Based on results from laboratory experiments, a model was fitted to evacuation rates at different oxygen levels and integrated into the existing consumption model for Baltic cod. Individual mean oxygen corrected consumption rates were 0.1–10.9% lower than...... the uncorrected ones. At the currently low predator stock size, however, the effect of oxygen-reduced consumption on the total amount of eaten prey biomass and thus predation mortalities was only marginal. But should successful management lead to higher cod stock sizes in the future, then total predation...

  9. Cod liver oil consumption at different periods of life and bone mineral density in old age.

    Science.gov (United States)

    Eysteinsdottir, Tinna; Halldorsson, Thorhallur I; Thorsdottir, Inga; Sigurdsson, Gunnar; Sigurdsson, Sigurdur; Harris, Tamara; Launer, Lenore J; Gudnason, Vilmundur; Gunnarsdottir, Ingibjorg; Steingrimsdottir, Laufey

    2015-07-01

    Cod liver oil is a traditional source of vitamin D in Iceland, and regular intake is recommended partly for the sake of bone health. However, the association between lifelong consumption of cod liver oil and bone mineral density (BMD) in old age is unclear. The present study attempted to assess the associations between intake of cod liver oil in adolescence, midlife, and old age, and hip BMD in old age, as well as associations between cod liver oil intake in old age and serum 25-hydroxyvitamin D (25(OH)D) concentration. Participants of the Age, Gene/Environment Susceptibility-Reykjavik Study (age 66-96 years; n 4798), reported retrospectively cod liver oil intake during adolescence and midlife, as well as the one now in old age, using a validated FFQ. BMD of femoral neck and trochanteric region was measured by volumetric quantitative computed tomography, and serum 25(OH)D concentration was measured by means of a direct, competitive chemiluminescence immunoassay. Associations were assessed using linear regression models. No significant association was seen between retrospective cod liver oil intake and hip BMD in old age. Current intake of aged men was also not associated with hip BMD, while aged women with daily intakes had z-scores on average 0.1 higher, compared with those with an intake of < once/week. Although significant, this difference is small, and its clinical relevance is questionable. Intake of aged participants was positively associated with serum 25(OH)D: individuals with intakes of < once/week, one to six time(s)/week and daily intake had concentrations of approximately 40, 50 and 60 nmol/l respectively (P for trend < 0.001).

  10. Spatio-temporal variability of the North Sea cod recruitment in relation to temperature and zooplankton.

    Directory of Open Access Journals (Sweden)

    Delphine Nicolas

    Full Text Available The North Sea cod (Gadus morhua, L. stock has continuously declined over the past four decades linked with overfishing and climate change. Changes in stock structure due to overfishing have made the stock largely dependent on its recruitment success, which greatly relies on environmental conditions. Here we focus on the spatio-temporal variability of cod recruitment in an effort to detect changes during the critical early life stages. Using International Bottom Trawl Survey (IBTS data from 1974 to 2011, a major spatio-temporal change in the distribution of cod recruits was identified in the late 1990s, characterized by a pronounced decrease in the central and southeastern North Sea stock. Other minor spatial changes were also recorded in the mid-1980s and early 1990s. We tested whether the observed changes in recruits distribution could be related with direct (i.e. temperature and/or indirect (i.e. changes in the quantity and quality of zooplankton prey effects of climate variability. The analyses were based on spatially-resolved time series, i.e. sea surface temperature (SST from the Hadley Center and zooplankton records from the Continuous Plankton Recorder Survey. We showed that spring SST increase was the main driver for the most recent decrease in cod recruitment. The late 1990s were also characterized by relatively low total zooplankton biomass, particularly of energy-rich zooplankton such as the copepod Calanus finmarchicus, which have further contributed to the decline of North Sea cod recruitment. Long-term spatially-resolved observations were used to produce regional distribution models that could further be used to predict the abundance of North Sea cod recruits based on temperature and zooplankton food availability.

  11. Using otolith microstructure to analyse growth of juvenile Baltic cod Gadus morhua

    DEFF Research Database (Denmark)

    Hüssy, Karin; Mosegaard, Henrik; Hinrichsen, H.H.

    2003-01-01

    otolith growth rates before settling continued to grow fast after settling. On the slope, no relationship between growth before and after settling was found. These results indicate that the different settling habitats occupied by juvenile Baltic cod have different potential for settling and nursery areas.......Pelagic and demersal juvenile Baltic cod Gadus morhua L. were collected on the slope and the top of Rønne bank in the Baltic Sea during 2 cruises in November and December 1998. The growth, age at settling and vertical migration pattern were studied by otolith microstructure analysis...

  12. Degradation of ATP and glycogen in cod ( Gadus morhua ) muscle during freezing

    DEFF Research Database (Denmark)

    Cappeln, Gertrud; Jessen, Flemming

    2001-01-01

    Changes in ATP, IMP, lactate and glycogen contents in the muscle of cod were followed during freezing at temperatures of -20C and -45C. ATP degradation was accompanied by a corresponding increase in IMP content. Simultaneous measurement of temperature showed that at both freezing rates......, the greatest decrease in ATP content was observed when the temperature reached -0.8C. Glycolysis occurred during freezing of cod as indicated by an increase in lactate content. The changes found in all measured metabolites were more pronounced when freezing was performed at a slow rate compared to a fast rate...

  13. Stable isotope evidence for late medieval (14th-15th C) origins of the eastern Baltic cod (Gadus morhua) fishery

    DEFF Research Database (Denmark)

    Orton, D.C.; Makowiecki, D.; de Roo, T.

    2011-01-01

    Although recent historical ecology studies have extended quantitative knowledge of eastern Baltic cod (Gadus morhua) exploitation back as far as the 16th century, the historical origin of the modern fishery remains obscure. Widespread archaeological evidence for cod consumption around the eastern...

  14. Effects of mixtures of persistent organic pollutants (POPs) derived from cod liver oil on H295R steroidogenesis

    NARCIS (Netherlands)

    Montano, M.; Zimmer, K.E.; Dahl, E.; Berge, V.; Olsaker, I.; Skaare, J.U.; Murk, A.J.; Ropstad, E.; Verhaegen, S.

    2011-01-01

    Crude cod liver oil and liver oil supplements are consumed as a source of vitamin A, D and polyunsaturated fatty acids; during winter and early pregnancy. Crude cod liver oil however constitutes a considerable source of persistent organic pollutants (POPs). This paper aimed at characterizing and qua

  15. The impacts of turbidity for COD measurements using UV-Vis spectrometry and compensation method (Conference Presentation)

    Science.gov (United States)

    Wen, Yizhang; Hu, Yingtian; Wang, Xiaoping

    2016-09-01

    Ultraviolet absorption spectroscopy is one of physical methods used for chemical oxygen demand (COD) measurements of water. The absorbances in ultraviolet band have a relationship to COD. However, turbidity in water could scatter emitting light and influence the absorbances. So it is very important to compensate for the impact of turbidity. In this study, the absorption spectra of standard COD solution (potassium acid phthalate), turbidity solution (Formazine) and their mixture are sampled in the wavelength range from 220 to 750 nm. The impacts of turbidity for COD measurement and compensation method are studied based on these data. The absorbance of mixture substract the absorbance of turbidity solution is less than the absorbance of standard COD solution. The result indicates that turbidity particles decrease the light absorption of organic molecules. Furthermore, we discover that the impact of turbidity is greater for the larger absorbance of the standard COD solution. Then attenuation coeffcient (AC()) is introduced and calculated based on exprimental results. In the process of turbidity compensation, the turbidity of solution is estimated using the absorbance of visible wavelength. The absorption spectra of the turbidity in the ultraviolet wavelength are simulated using normalization technique. The satisfactory prediction result of COD is achieved for the mixture after the turbidity compensation. In conclusion, the new turbidity compensation method could eliminate the influence of turbidity for COD measurements based on absorption spectroscopy.

  16. Membrane bioreactors fed with different COD/N ratio wastewater: impacts on microbial community, microbial products, and membrane fouling.

    Science.gov (United States)

    Han, Xiaomeng; Wang, Zhiwei; Ma, Jinxing; Zhu, Chaowei; Li, Yaxin; Wu, Zhichao

    2015-08-01

    It is known that an increase of COD/N ratio can result in an enhanced removal of nutrients in membrane bioreactors (MBRs); however, impacts of doing so on membrane filtration performance remain unclear. In this work, comparison of membrane filtration performance, microbial community, and microbial products under low temperature was carried out in anoxic/oxic (A/O) MBRs with COD/N ratios of 9.9 and 5.5 g COD/g N in influent. There was no doubt that an improvement of nitrogen removal under high COD/N ratio was observed; however, severer membrane fouling was found compared to the MBR fed with low COD/N ratio wastewater. The increase of COD/N ratio resulted in an elevated production of humic acids in soluble microbial product (SMP) and carbohydrates, proteins, and humic acids in loosely bound extracellular polymeric substance (LB-EPS). Quartz crystal microbalance with dissipation monitoring (QCM-D) analysis showed that the adsorption capability of SMP and LB-EPS was higher in the MBR with higher COD/N ratio. Four hundred fifty four high-throughput pyrosequencing revealed that the higher COD/N ratio led to the enrichment of Bacteroidetes at phylum level and Azospira, Thauera, Zoogloea, etc. at genus level. Bacteroidetes are considered to potentially release EPS, and Azospira, Thauera, and Zoogloea, etc. have denitrification activity. The change in microbial communities is consistent with MBR performance.

  17. 77 FR 62464 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Cod by Vessels Using Pot Gear in the...

    Science.gov (United States)

    2012-10-15

    ... Economic Zone Off Alaska; Pacific Cod by Vessels Using Pot Gear in the Central Regulatory Area of the Gulf... for Pacific cod by vessels using pot gear in the Central Regulatory Area of the Gulf of Alaska (GOA... vessels using pot gear in the Central Regulatory Area of the GOA. DATES: Effective 1200 hrs, Alaska...

  18. 78 FR 10102 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Cod by Vessels Using Pot Gear in the...

    Science.gov (United States)

    2013-02-13

    ... Economic Zone Off Alaska; Pacific Cod by Vessels Using Pot Gear in the Central Regulatory Area of the Gulf... for Pacific cod by vessels using pot gear in the Central Regulatory Area of the Gulf of Alaska (GOA... allowable catch apportioned to vessels using pot gear in the Central Regulatory Area of the GOA....

  19. 77 FR 14305 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Cod by Vessels Using Jig Gear in the...

    Science.gov (United States)

    2012-03-09

    ... Economic Zone Off Alaska; Pacific Cod by Vessels Using Jig Gear in the Central Regulatory Area of the Gulf... for Pacific cod by vessels using jig gear in the Central Regulatory Area of the Gulf of Alaska (GOA... allowable catch apportioned to vessels using jig gear in the Central Regulatory Area of the GOA....

  20. 78 FR 7280 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Cod by Vessels Using Pot Gear in the...

    Science.gov (United States)

    2013-02-01

    ... Economic Zone Off Alaska; Pacific Cod by Vessels Using Pot Gear in the Western Regulatory Area of the Gulf... for Pacific cod by vessels using pot gear in the Western Regulatory Area of the Gulf of Alaska (GOA... allowable catch apportioned to vessels using pot gear in the Western Regulatory Area of the GOA....

  1. 77 FR 65640 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Cod by Vessels Using Pot Gear in the...

    Science.gov (United States)

    2012-10-30

    ... Economic Zone Off Alaska; Pacific Cod by Vessels Using Pot Gear in the Central Regulatory Area of the Gulf... directed fishing for Pacific cod by vessels using pot gear in the Central Regulatory Area of the Gulf of...) apportioned to vessels using pot gear in the Central Regulatory Area of the GOA. DATES: Effective 1200...

  2. 77 FR 6683 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Cod by Vessels Using Pot Gear in the...

    Science.gov (United States)

    2012-02-09

    ... Economic Zone Off Alaska; Pacific Cod by Vessels Using Pot Gear in the Western Regulatory Area of the Gulf... for Pacific cod by vessels using pot gear in the Western Regulatory Area of the Gulf of Alaska (GOA... allowable catch apportioned to vessels using pot gear in the Western Regulatory Area of the GOA....

  3. 77 FR 67580 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Cod by Vessels Using Jig Gear in the...

    Science.gov (United States)

    2012-11-13

    ... Economic Zone Off Alaska; Pacific Cod by Vessels Using Jig Gear in the Central Regulatory Area of the Gulf... directed fishing for Pacific cod by vessels using jig gear in the Central Regulatory Area of the Gulf of...) apportioned to vessels using jig gear in the Central Regulatory Area of the GOA. DATES: Effective 1200...

  4. CodY orchestrates the expression of virulence determinants in emetic Bacillus cereus by impacting key regulatory circuits.

    Science.gov (United States)

    Frenzel, Elrike; Doll, Viktoria; Pauthner, Matthias; Lücking, Genia; Scherer, Siegfried; Ehling-Schulz, Monika

    2012-07-01

    Bacillus cereus causes gastrointestinal diseases and local and systemic infections elicited by the depsipeptide cereulide, enterotoxins, phospholipases, cytolysins and proteases. The PlcR-PapR quorum sensing system activates the expression of several virulence factors, whereas the Spo0A-AbrB regulatory circuit partially controls the plasmid-borne cereulide synthetase (ces) operon. Here, we show that CodY, a nutrient-responsive regulator of Gram-positive bacteria, has a profound effect on both regulatory systems, which have been assumed to operate independently of each other. Deletion of codY resulted in downregulation of virulence genes belonging to the PlcR regulon and a concomitant upregulation of the ces genes. CodY was found to be a repressor of the ces operon, but did not interact with the promoter regions of PlcR-dependent virulence genes in vitro, suggesting an indirect regulation of the latter. Furthermore, CodY binds to the promoter of the immune inhibitor metalloprotease InhA1, demonstrating that CodY directly links B. cereus metabolism to virulence. In vivo studies using a Galleria mellonella infection model, showed that the codY mutant was substantially attenuated, highlighting the importance of CodY as a key regulator of pathogenicity. Our results demonstrate that CodY profoundly modulates the virulence of B. cereus, possibly controlling the development of pathogenic traits in suitable host environments.

  5. 76 FR 66655 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Cod and Octopus in the Bering Sea...

    Science.gov (United States)

    2011-10-27

    ... Economic Zone Off Alaska; Pacific Cod and Octopus in the Bering Sea and Aleutian Islands Management Area... necessary to limit incidental catch of octopus by vessels using pot gear to fish for Pacific cod the BSAI... Act requires that conservation and management measures prevent overfishing. The 2011...

  6. CodY, a pleiotropic regulator, influences multicellular behaviour and efficient production of virulence factors in Bacillus cereus

    NARCIS (Netherlands)

    Lindback, Toril; Mols, Maarten; Basset, Coraline; Granum, Per Einar; Kuipers, Oscar P.; Kovacs, Akos T.; Lindbäck, Toril

    2012-01-01

    In response to nutrient limitation in the environment, the global transcriptional regulator CodY modulates various pathways in low G+C Gram-positive bacteria. In Bacillus subtilis CodY triggers adaptation to starvation by secretion of proteases coupled to the expression of amino acid transporters. F

  7. Temporal trends in age and size at maturation of four North Sea gadid populations: cod, haddock, whiting, and Norway pout

    DEFF Research Database (Denmark)

    Marty, Lise; Rochet, Marie-Joëlle; Ernande, Bruno

    2014-01-01

    environmental variables exhibiting a temporal trend suggest that, despite some evidence of environmental effects, PMRN trends were mostly independent of growth-independent plasticity in haddock, whiting, and male cod, but not in female cod. According to these findings, evolution of maturation, potentially...

  8. 76 FR 72383 - Atlantic Highly Migratory Species; Atlantic Shark Management Measures

    Science.gov (United States)

    2011-11-23

    ... Administration 50 CFR Part 635 RIN 0648-BA17 Atlantic Highly Migratory Species; Atlantic Shark Management...) and fishery management plan (FMP) amendment that would consider catch shares for the Atlantic shark... design elements for potential catch shares programs in the Atlantic shark fisheries. Additionally,...

  9. Atlantic NAD 83 OCS Planning Areas

    Data.gov (United States)

    Bureau of Ocean Energy Management, Department of the Interior — This data set contains BOEM Planning Area outlines in ESRI shapefile format for the BOEM Atlantic Region. The old Atlantic Planning Area outlines were changed as of...

  10. Atlantic menhaden processing plant test tagging data

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Atlantic menhaden are a schooling forage fish species, which are subject to a large commercial purse seine fishery. Atlantic menhaden are harvested for reduction...

  11. Effects of Technological Parameters and Fishing Ground on Quality Attributes of Thawed, Chilled Cod Fillets Stored in Modified Atmosphere Packaging

    DEFF Research Database (Denmark)

    Bøknæs, Niels; Østerberg, Carsten; Sørensen, Rie

    2001-01-01

    Effects were studied of various technological parameters and fishing ground on quality attributes of thawed, chilled cod fillets stored in modified atmosphere packaging Frozen fillets of Baltic Sea and Barents Sea cod, representing two commercial fishing grounds, were used as raw material...... and chill stored MAP fillets from the two fishing grounds. Despite modest production of trimethylamine in Baltic Sea fillets, this cod raw material was less suitable for production of thawed AMP products clue to high drip losses during chill storage. (C) 2001 Academic Press........ phosphoreum growth and trimethylamine production in thawed and chill-stored MAP Baltic Sea cod fillets were strongly inhibited after as little as 4 weeks of frozen storage at -30degreesC. Contents of trimethylamine oxide and NaCl were substantially higher in fillets of Barents Sea cod compared to fillets...

  12. APPLICATION OF ELECTROCHEMICAL METHODS FOR DECREASING OF CHEMICAL OXYGEN DEMAND (COD AND TOTAL SUSPENDED SOLID (TSS OF TOFU INDUSTRIAL WASTEWATER

    Directory of Open Access Journals (Sweden)

    Suyata

    2015-05-01

    Full Text Available Tofu industrial wastewater has high COD and TSS level, which it cause an environmental pollution. Therefore, it is necessary to decrease the value of COD and TSS of tofu industrial wastewater before discharge into the water body. Decreasing of COD and TSS values can be carried out using an electrochemical method. The purpose of this research was to determine the effect of potential, electrode distance, pH, and time to decrease of COD and TSS value of the tofu industrial wastewater. The experiment has been performed by electrolysis tofu industrial wastewater using PbO2 as anode and Pb as cathode. The result of the research showed that under the optimum conditions of 12 V voltage, 1 cm electrode distance, pH 1, and electrolysis time of 120 minutes, decreasing COD and TSS of 96.33% and 87.87% respectively

  13. Multi-decadal scale variability in the eastern Baltic cod fishery 1550-1860 - Evidence and causes

    DEFF Research Database (Denmark)

    MacKenzie, Brian; Bager, M.; Ojaveer, H.;

    2007-01-01

    reduction in cod fishing mortality and suitable hydrographic conditions which promote successful cod reproduction. Historical ecology investigations in the Baltic can contribute to scientifically based fishery and ecosystem management and recovery plans. (c) 2007 Elsevier B.V. All rights reserved....... is unknown, as is the relative role of fishing, climate variability/regimes, eutrophication and reduction of marine mammal predator populations. We have begun to investigate whether historical fisheries information (landings, effort, distribution) from before the 1880s is available in Baltic archives...... affecting cod reproduction and ecology in the Baltic Sea. The recovered data show that the Baltic ecosystem was able to support modest-large cod populations even though it was oligotrophic and contained large populations of cod predators (e.g., marine mammals). Current ecosystem management policy...

  14. Using data storage tags to link otolith macrostructure in Baltic cod Gadus morhua with environmental conditions

    DEFF Research Database (Denmark)

    Hüssy, Karin; Nielsen, Birgitte; Mosegaard, Henrik;

    2009-01-01

    We examined otolith opacity of Baltic cod in relation to environmental conditions in order to evaluate the formation mechanisms of seasonal patterns used in age determination. Adult fish were tagged with data storage tags (DSTs) and a permanent mark was induced in the otoliths by injection...

  15. Hydrographic influence on the spawning habitat suitability of western Baltic cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Hüssy, K.; Hinrichsen, H.-H.; Huwer, B.

    2012-01-01

    Hydrographic influence on the spawning habitat suitability of western Baltic cod (Gadus morhua) – ICES Journal of Marine Science, 69: 1736–1743.Recruitment variability of marine fish is influenced by the reproductive potential of the stock (i.e. stock characteristics and abundance) and the surviv...

  16. Simulations on the prediction of cod (Gadus morhua) freshness from an intelligent packaging sensor concept

    NARCIS (Netherlands)

    Heising, J.K.; Boekel, van M.A.J.S.; Dekker, M.

    2015-01-01

    A non-destructive method that monitors changes in the freshness status of packed cod fillets has potential for the development of an intelligent packaging concept. The method is based on monitoring volatile compounds that dissolve and dissociate in the sensing aqueous phase. A mathematical model was

  17. COD FRACTIONS IN THE PROCESS OF MECHANICAL-BIOLOGICAL TREATMENT SEWAGE

    Directory of Open Access Journals (Sweden)

    Joanna Smyk

    2015-11-01

    Full Text Available The aim of the research was to determine the COD fraction thereof in sewage and their changes in the effluent after further treatment processes. The study was conducted in a sewage treatment plant in Bialystok (RLM> 100000. In sewage the highest concentrations occurred in the suspension of the organic fractions slowly biodegradable XS (303.7 mg O2/l and dissolved organic compounds readily biodegradable SS (263 mg O2/l. The lower amounts were irreducible fractions dissolved in sewage and suspended SI (56 mg O2/l and XI (101.2 mg O2/l. Almost 80% of the total COD fractions were biodegradable (SS + XS. In the treated wastewater soluble fraction SI-biodegradable (56 mg O2/l occurred in the highest concentration. The flow of wastewater by components of sewage treatment plant resulted the complete removal of biologically degradable fraction of dissolved SS. More than 94.5% of the total COD in waste water purified fractions were biologically decomposable (SI + XI. Moreover, based on the analysis of studies the following soil removal was found: BOD5 – 99.4%, COD – 92.9%, total nitrogen – 93.4%, total phosphorus – 92%. After waste water treatment, ammonia nitrogen was completely removed while the nitrate concentration increased to 4.6 mg N/dm3.

  18. Nitrogen and COD removal from domestic and synthetic wastewater in subsurface-flow constructed wetlands.

    Science.gov (United States)

    Collison, R S; Grismer, M E

    2013-09-01

    Comparisons of the performance of constructed-wetland systems (CWs) for treating domestic wastewater in the laboratory and field may use pathogen-free synthetic wastewater to avoid regulatory health concerns. However, little to no data are available describing the relative treatment efficiencies of CWs to both actual and synthetic domestic wastewaters so as to enable such comparison. To fill this gap, treatment performances with respect to organics (chemical organic demand; COD) and nitrogen (ammonium and nitrate) removal from domestic (septic tank) and a similar-strength synthetic wastewater under planted and non-planted subsurface-flow CWs are determined. One pair of CWs was planted with cattails in May 2008, whereas the adjacent system was non-planted. Collected septic tank or synthesized wastewater was allowed to gravity feed each CWs, and effluent samples were collected and tested for COD and nitrogen species regularly during four different periods over six months. Overall, statistically significant greater removal of COD (-12%) and nitrogen (-5%) occurred from the synthetic as compared with the domestic wastewater from the planted and non-planted CWs. Effluent BOD5/COD ratios from the synthetic wastewater CWs averaged nearly twice that from the domestic wastewater CWs (0.17 vs 0.10), reflecting greater concentrations of readily degraded compounds. That removal fractions were consistent across the mid-range loading rates to the CWs suggests that the synthetic wastewater can be used in testing laboratory CWs with reasonable success in application of their results to the field.

  19. Low-temperature transitions in cod and tuna determined by differential scanning calorimetry

    DEFF Research Database (Denmark)

    Jensen, Kristina Nedenskov; Jørgensen, Bo; Nielsen, Jette

    2003-01-01

    Differential scanning calorimetry measurements have revealed different thermal transitions in cod and tuna samples. Transition temperatures detected Lit -11degreesC, -15degreesC and -21degreesC were highly dependent on the annealing temperature. In tuna muscle an additional transition was observe...

  20. DEVELOPMENT OF TECHNOLOGY FOR FISH CANNED PATE'S COD-FISH SPECIES

    Directory of Open Access Journals (Sweden)

    A. A. Efremova

    2014-01-01

    Full Text Available Summary. Fish and seafood play an important role in a balanced diet. The most reliable method of preservation is the production of canned fish. Cod fishery considered traditional objects of the North Basin, which catches in recent years stored at a consistently high level. They are represented, mainly cod, haddock, pollack, whiting. Lately there has been a tendency to increase yield loaves (polar bib. The aim of this work - the development of technology - canned pate's cod fish species with the addition of plant materials. We used the adopted research microbiological, chemical and physical methods. The weight proportion of water, lipids, protein, mineral raw determined according to State standard 7636-85. Developed a technology - canned pate's cod fish species with the addition of plant materials. Optimized formulation is set to sterilization. Experimentally determined parameters of quality canned and given comprehensive assessment nutritional value of new products, organoleptic, physico-chemical, biochemical and microbiological tests showed that canned pates of Gadidae species of fish with vegetables, meet all safety requirements and are characterized, along with excellent consumer properties, high nutritional value. Based on the results of the research complex developed technical documentation for production of canned vegetables, pates of Gadidae species.

  1. Stock recruitment relationships for cod ( Gadus morhua L.) in the central Baltic Sea incorporating environmental variability

    DEFF Research Database (Denmark)

    Jarre, Astrid; Wieland, Kai; MacKenzie, Brian;

    2000-01-01

    Recruitment of central/eastern Baltic cod critically depends on favourable oceanographic conditions in the deeper basins of the Baltic Sea creating a suitable habitat for the development of early life stages. The decline in the size of the spawning stock since the mid-1980s initiated a series...

  2. Glycolysis and ATP degradation in cod ( Gadus morhua ) at subzero temperatures in relation to thaw rigor

    DEFF Research Database (Denmark)

    Cappeln, Gertrud; Jessen, Flemming

    2001-01-01

    Glycolysis was shown to occur during freezing of cod of decrease in glycogen and an increase in lactate. In addition, the ATP content decreased during freezing. Synthesis of ATP was measured as degradation of glycogen. During storage at -9 and - 12 degreesC it was found that degradation of ATP...

  3. An obstacle to China's WWTPs: the COD and BOD standards for discharge into municipal sewers.

    Science.gov (United States)

    Liao, Zhenliang; Hu, Tiantian; Roker, Scott Albert C

    2015-11-01

    In 2001, a construction campaign regarding wastewater treatment plants (WWTPs) occurred in China. Unfortunately, the treatment has not yet achieved anticipated effectiveness. A critical reason for this is that the influent chemical oxygen demand (COD) and biochemical oxygen demand (BOD) concentrations in WWTPs are unacceptably low. This paper indicates that a fundamental, but commonly overlooked contributing factor to this problem is that a large portion of easily degradable COD and BOD is degraded prematurely before entering municipal sewers, and this is directly correlated to China's standards for pollutant discharging into municipal sewers. This perspective is further unfolded through retrospection of the history of Chinese wastewater treatment and the investigation of standards among developed zones and districts. This paper suggests that in China, the standards for pollutant discharging into municipal sewers should be relaxed. Meanwhile, unnecessary pretreatment of COD and BOD should cease for the purpose of ensuring that easily degradable COD and BOD can be transferred to WWTPs to improve treatment efficiency. Moreover, additional alternatives are presented to resolve this problem.

  4. Fishing gear-induced skin ulcerations in Baltic cod, Gadus morhua L

    DEFF Research Database (Denmark)

    Mellergaard, Stig; Bagge, O.

    1998-01-01

    In 1982 a high prevalence of skin ulcerations was observed in Baltic cod in the vicinity of the Danish island of Bornholm. In March the prevalence varied from G to 13%, and in May it had increased to between 26 and 48%. The ulcerations had a sequential development. The initial stage appeared as s...

  5. Specific inhibition of Photobacterium phosphoreum extends the shelf life of modified-atmosphere-packed cod fillets

    DEFF Research Database (Denmark)

    Dalgaard, Paw; Munoz, L.G.; Mejlholm, Ole

    1998-01-01

    Inhibition of the specific spoilage organism, Photobacterium phosphoreum, was studied in model substrates and in modified- atmosphere-packed cod fillets. The objective was to determine how inhibition of this organism influenced spoilage. The spoilage reactions limiting shelf life were studied rat...

  6. Characterization of the Escherichia coli codBA operon encoding cytosine permease and cytosine deaminase

    DEFF Research Database (Denmark)

    Danielsen, S; Kilstrup, M; Barilla, K;

    1992-01-01

    . A two-codon overlap between the two reading frames indicates that they constitute an operon. Transcription of the operon was found to be regulated by exogenous purines. Polypeptides specified by each of the two reading frames were expressed in minicells, and the codB gene product was found to be highly...

  7. Foraging behavior of larval cod ( Gadus morhua ) influenced by prey density and hunger

    DEFF Research Database (Denmark)

    Munk, Peter

    1995-01-01

    Fish larvae meet diverse environmental conditions at sea, and larval growth and chance of survival depend on a flexible response to environmental variability. The present study focuses on the flexibility of the foraging behaviour of larval cod in a series of laboratory experiments on larval search...

  8. Eastern Baltic cod in distress: biological changes and challenges for stock assessment

    DEFF Research Database (Denmark)

    Eero, Margit; Hjelm, Joakim; Behrens, Jane;

    2015-01-01

    The eastern Baltic (EB) cod (Gadus morhua) stock was depleted and overexploited for decades until the mid-2000s, when fishing mortality rapidly declined and biomass started to increase, as shown by stock assessments. These positive developments were partly assigned to effective management measure...

  9. Sensory characteristics of different cod products related to consumer preferences and attitudes

    NARCIS (Netherlands)

    Sveinsdottir, K.; Martinsdottir, E.; Green-Petersen, D.; Hyldig, G.; Schelvis-Smit, A.A.M.

    2009-01-01

    Quantitative descriptive analysis (QDA) was used to analyse the sensory quality of eight cod products, different with regard to origin (wild/farmed), storage time (short/extended) and storage method (fresh/frozen/packed in modified atmosphere). At the same time, 378 consumers in four European countr

  10. Mapping the spawning grounds of North Sea cod (Gadus morhua) by direct and indirect means

    NARCIS (Netherlands)

    Fox, C.J.; Taylor, M.; Dickey-Collas, M.; Fossum, P.; Kraus, G.; Rohlf, N.; Damme, van C.J.G.; Bolle, L.J.

    2008-01-01

    Despite recent evidence for sub-stock structuring, North Sea cod are assessed as a single unit. As a consequence, knowledge of sub-stock trends is poor. In particular, there are no recent evaluations of which spawning grounds are active. Here we report results from the first ichthyoplankton survey t

  11. COD and color removal of reactive orange 16 dye solution by electrochemical oxidation and adsorption method

    Science.gov (United States)

    Zakaria, Zuhailie; Ahmad, Wan Yaacob Wan; Yusop, Muhammad Rahimi; Othman, Mohamed Rozali

    2015-09-01

    Degradation of Reactive Orange 16 (RO16) dye was investigated using electrochemical oxidation and adsorption (batch method) using mixture of coconut trunk charcoal-graphite-tin-polyvinyl chloride(PVC). In batch studies for adsorbents pellet and powder form of the charcoal mixture were used. RO16 was chosen as the model dye because of its high resistance towards conventional treatment methods. NaCl and RO16 concentration, treatment duration, weight of electrode and adsorbent and volume of solution were kept constant for both methods. The effectiveness of the treatments were compared and evaluated by percentage of RO16 decolorization and chemical oxygen demand (COD) removal and results indicated that electrochemical oxidation method ables to decolorized RO16 dye up to 98.5% after 20 minutes electrolysis time while pellet and powder in batch method only removed 17.1 and 33.6% of RO16 color respectively. However, only 45.6% of COD can be removed using electrochemical oxidation method while pellet and powder in batch method removed 47.8 and 49.6% of COD respectively. The decolorization and COD removal of RO16 was determined using UV-Vis spectrophotometer (by the changes of absorption spectrum intensity of azo chromophore (-N=N-) at λ=388 and 492.50 nm and Hach spectrophotometer respectively. FTIR was used to determine functional groups present in the coconut trunk charcoal.

  12. Factorial design analysis for COD removal from landfill leachate by photoassisted Fered-Fenton process.

    Science.gov (United States)

    Wu, Xiaogang; Zhang, Hui; Li, Yanli; Zhang, Daobin; Li, Xianwang

    2014-01-01

    The Fered-Fenton process has been shown to be an effective method for leachate treatment, but it still faces problems of inadequate regeneration of ferrous ion. However, the use of the photoassisted Fered-Fenton process could overcome this difficulty and improve the efficiency of chemical oxygen demand (COD) removal since photoassisted Fered-Fenton process induces the production of hydroxyl radicals from the regeneration of ferrous ions and the reaction of hydrogen peroxide with UV light. As there are so many operating parameters in photoassisted Fered-Fenton process, it is necessary to develop a mathematical model in order to produce the most economical process. In the present study, a factorial design was carried out to evaluate leachate treatment by photoassisted Fered-Fenton process. The influence of the following variables: H₂O₂ concentration, Fe(2+) concentration, current density, and initial pH in the photoassisted Fered-Fenton process was investigated by measuring COD removal efficiencies after 60-min reaction. The relationship between COD removal and the most significant independent variables was established by means of an experimental design. The H₂O₂ concentration, Fe(2+) concentration, initial pH, and the interaction effect between current density and initial pH were all significant factors. The factorial design models were derived based on the COD removal efficiency results and the models fit the data well.

  13. Eel, cod and seatrout harvest in Danish recreational fishing during 2011

    DEFF Research Database (Denmark)

    Sparrevohn, Claus Reedtz; Storr-Paulsen, Marie

    , it was estimated that 80 t [Relative standard error (RSE)=6%] eel, close to 1,300 t (RSE=5 %) cod and 400 t (RSE=5 %) seatrout (including freshwater catches) was harvested in the recreational fishery. Eel is almost exclusively taken in the passive gear fykenet fishery and seatrout was mainly caught by anglers...

  14. Atlantic Seaduck Project

    Science.gov (United States)

    Perry, M.C.; Hanson, Alan; Kerekes, Joseph; Paquet, Julie

    2006-01-01

    Atlantic Seaduck Project is being conducted to learn more about the breeding and moulting areas of seaducks in northern Canada and more about their feeding ecology on wintering areas, especially Chesapeake Bay. Satellite telemetry is being used to track surf scoters wintering in Chesapeake Bay, Maryland and black scoters on migrational staging areas in New Brunswick, Canada to breeding and moulting areas in northern Canada. Various techniques used to capture the scoters included mist netting, night-lighting, and net capture guns. All captured ducks were transported to a veterinary hospital where surgery was conducted following general anaesthesia procedures. A PTT100 transmitter (39 g) manufactured by Microwave, Inc., Columbia, Maryland was implanted into the duck?s abdominal cavity with an external (percutaneous) antenna. Eight of the surf scoters from Chesapeake Bay successfully migrated to possible breeding areas in Canada and all 13 of the black scoters migrated to suspected breeding areas. Ten of the 11 black scoter males migrated to James Bay presumably for moulting. Updated information from the ARGOS Systems aboard the NOAA satellites on scoter movements was made accessible on the Patuxent Website. Habitat cover types of locations using GIS (Geographical Information Systems) and aerial photographs (in conjunction with remote sensing software) are currently being analyzed to build thematic maps with varying cosmetic layer applications. Many factors related to human population increases have been implicated in causing changes in the distribution and abundance of wintering seaducks. Analyses of the gullet (oesophagus and proventriculus) and the gizzard of seaducks are currently being conducted to determine if changes from historical data have occurred. Scoters in the Bay feed predominantly on the hooked mussel and several species of clams. The long-tailed duck appears to select the gem clam in greater amounts than other seaducks, but exhibits a diverse diet of

  15. Atlantic CFC data in CARINA

    Directory of Open Access Journals (Sweden)

    R. Steinfeldt

    2010-01-01

    Full Text Available Water column data of carbon and carbon-relevant parameters have been collected and merged into a new database called CARINA (CARbon IN the Atlantic. In order to provide a consistent data set, all data have been examined for systematic biases and adjusted if necessary (secondary quality control (QC. The CARINA data set is divided into three regions: the Arctic/Nordic Seas, the Atlantic region and the Southern Ocean. Here we present the CFC data for the Atlantic region, including the chlorofluorocarbons CFC-11, CFC-12 and CFC-113 as well as carbon tetrachloride (CCl4. The methods applied for the secondary quality control, a crossover analyses, the investigation of CFC ratios in the ocean and the CFC surface saturation are presented. Based on the results, the CFC data of some cruises are adjusted by a certain factor or given a "poor'' quality flag.

  16. Penyisihan COD dari Limbah Cair Pabrik Minyak Kelapa Sawit menggunakan Nano Karbon Aktif

    Directory of Open Access Journals (Sweden)

    Aris Munandar

    2016-06-01

    Full Text Available Limbah cair pabrik minyak kelapa sawit (PMKS merupakan sumber pencemar potensial yang dapat memberikan dampak serius terhadap lingkungan, sehingga diperlukan penanganan terhadap limbah cair tersebut melalui peningkatan teknologi pengolahan. Salah satu metode yang dapat digunakan untuk menghilangkan zat pencemar tersebut adalah dengan proses adsorpsi. Dalam penelitian ini, adsorben yang digunakan adalah karbon aktif dalam skala nanometer. Nano karbon diaktivasi secara fisika (kalsinasi pada suhu 700OC untuk mendapatkan volume pori yang lebih besar. Kristalinitas nano karbon aktif dianalisis menggunakan X-Ray Diffraction (XRD, sedangkan morfologi dari nano karbon aktif dianalisis dengan Scanning Electron Microscopy (SEM. Konsentrasi COD sebelum dan setelah proses adsorbsi dilakukan dengan menggunakan spektrofotometer. Penelitian ini dilakukan dengan variasi waktu kontak (0,5; 1; 2; 3; 4; dan 8 jam, massa adsorben (0,25; 0,5; 1; dan 2 gr, konsentrasi awal (47,60; 97,04; 193,84; dan 482,82 mg/l, ukuran adsorben (nano size dan mikron size, dan jenis adsorben (nano karbon aktif dan nano zeolit. Hasil penelitian menunjukkan bahwa waktu kontak, massa adsorben, jenis adsorben, dan konsentrasi awal sampel limbah mempengaruhi penyisihan COD. Waktu kontak yang optimal antara nano karbon aktif dengan COD adalah 4 jam dengan massa adsorben 2 gr. Pada jumlah atau massa adsorben yang tetap (2 gram semakin tinggi konsentrasi awal COD di dalam sampel limbah maka persen penyisihan semakin kecil. Ukuran sampel pada skala nano memberikan hasil yang lebih baik dibandingkan ukuran sampel pada skala mikron. Hasil penyisihan COD di dalam sample PMKS untuk nano karbon aktif lebih baik dibandingkan nano zeolit. Hasil Scanning Electron Microscopy (SEM terlihat bahwa nano karbon aktif memiliki ukuran nanometer (10-9.

  17. Replacement of chemical oxygen demand (COD) with total organic carbon (TOC) for monitoring wastewater treatment performance to minimize disposal of toxic analytical waste.

    Science.gov (United States)

    Dubber, Donata; Gray, Nicholas F

    2010-10-01

    Chemical oxygen demand (COD) is widely used for wastewater monitoring, design, modeling and plant operational analysis. However this method results in the production of hazardous wastes including mercury and hexavalent chromium. The study examined the replacement of COD with total organic carbon (TOC) for general performance monitoring by comparing their relationship with influent and effluent samples from 11 wastewater treatment plants. Biochemical oxygen demand (BOD5) was also included in the comparison as a control. The results show significant linear relationships between TOC, COD and BOD5 in settled (influent) domestic and municipal wastewaters, but only between COD and TOC in treated effluents. The study concludes that TOC can be reliably used for the generic replacement of both COD (COD=49.2+3.00*TOC) and BOD5 (BOD5=23.7+1.68*TOC) in influent wastewaters but only for COD (COD=7.25+2.99*TOC) in final effluents.

  18. COD removal from pulp and paper effluents by Advanced Oxidation Processes (AOP); COD:n vaehentaeminen aop-menetelmaellae metsaeteollisuuden jaetevesistae - EKY 04

    Energy Technology Data Exchange (ETDEWEB)

    Jansson, K.; Wikberg, H. [Kemira Chemicals Oy, Vaasa (Finland)

    1998-12-31

    The aim of this project is to develop a process where COD from pulp and paper industry can be removed by an AOP process. AOP is a process utilizing the oxidation power of the hydroxyl radical, which can be produced in many different ways. Compared to evaporation and membrane techniques, the benefits of this process are lack of condense, concentrate and sludge. It is a very simple process, based on adjusting the COD removal by means of hydrogen peroxide dosage. The study focuses on using heterogeneous catalyst together with hydrogen peroxide to produce hydroxyl radicals in order to remove COD at low temperatures (< 100 deg C) and normal pressures. The project started by screening catalysts able to perform this task in laboratory scale. Later on pilot scale equipment will be constructed for use in pulp and paper mill trials. The project will be carried out during 1997-1999. The study started by screening the possibilities of different catalysts together with hydrogen peroxide to remove phenols from a model water. Sofar, about hundred catalysts have been screened. These tests show that many of the heterogeneous catalysts are working, but most of them have actually dissolved in the water and `translated` to homogenous catalysts. This means that they cannot be used in this project. A few catalysts have been found to meet the targets for synthetic phenol waters. Next step will be to test these catalysts on actual water samples from pulp and paper mills, and after that a pilot and full-scale trial will be planned. In these trials we will find out which mill streams are possible to treat, and the cost/performances of a system totally based on the catalyst in use. Also, measurements of catalyst leaching and clogging will be made during these tests. The last test series is planned to be a full-scale trial. (orig.)

  19. Effect of COD/N ratio on nitrogen removal and microbial communities of CANON process in membrane bioreactors.

    Science.gov (United States)

    Zhang, Xiaojing; Zhang, Hongzhong; Ye, Changming; Wei, Mingbao; Du, Jingjing

    2015-08-01

    In this study, the effect of COD/N ratio on completely autotrophic nitrogen removal over nitrite (CANON) process was investigated in five identical membrane bioreactors. The five reactors were simultaneously seeded for 1L CANON sludge and be operated for more than two months under same conditions, with influent COD/N ratio of 0, 0.5, 1, 2 and 4, respectively. DGGE was used to analyze the microbial communities of aerobic ammonia-oxidizing bacteria (AOB) and anaerobic ammonia-oxidizing bacteria (AAOB) in five reactors. Results revealed the harmonious work of CANON and denitrification with low COD concentration, whereas too high COD concentration suppressed both AOB and AAOB. AOB and AAOB biodiversity both decreased with COD increasing, which then led to worse nitrogen removal. The suppressing threshold of COD/N ratio for CANON was 1.7. CANON was feasible for treating low COD/N sewage, while the high sewage should be converted by anaerobic biogas producing process in advance.

  20. Distribution patterns in Atlantic hydroids

    NARCIS (Netherlands)

    Medel, M.D.; López-González, P.J.

    1998-01-01

    The present study is a first attempt to comparing the hydroid faunas of the various Zoogeographie areas of the Atlantic Ocean. We restricted ourselves to species of the orders Antho- and Leptomedusae, of which 1050 species were taken into account. The classification of zoogeographic areas used follo

  1. Witches in the Atlantic World.

    Science.gov (United States)

    Breslaw, Elaine

    2003-01-01

    Presents a lesson plan that focuses on witchcraft in the Atlantic world. Describes each of the four sections of the lesson that encompasses learning about terms and religious views on witchcraft to the history of witchcraft in New England, in the United States, and the Salem (Massachusetts) witchcraft trials. (CMK)

  2. Overexpression of the pleiotropic regulator CodY decreases sporulation, attachment and pellicle formation in Bacillus anthracis.

    Science.gov (United States)

    Gopalani, Monisha; Dhiman, Alisha; Rahi, Amit; Bhatnagar, Rakesh

    2016-01-15

    CodY, a global transcriptional regulator, primarily functions as a nutrient and energy sensor. It is activated by metabolic effectors like BCAA and GTP. In low G + C Gram positive bacteria, it facilitates coupling of changes in the cellular metabolite pool with those required in the transcriptome of the cell. This pleiotropic regulator controls the expression of a vast number of genes as the cell transits from exponential to the stationary phase. Earlier studies have shown that CodY is required for the virulence of Bacillus anthracis. We sought to investigate the effect of its overexpression on the physiology of B. anthracis. In our study, we found that cellular CodY levels were unchanged during this phase-transition. Expression of endogenous CodY remained the same in different nutrient limiting conditions. Immunoblotting studies revealed CodY presence in the whole spore lysate of B. anthracis indicating it to be a component of the spore proteome. We could also detect CodY in the secretome of B. anthracis. Further, CodY was overexpressed in B. anthracis Sterne strain and this led to a 100-fold decrease in the sporulation titer and a 2.5-fold decrease in the in vitro attachment ability of the bacteria. We also observed a decrease in the pellicle formation by CodY overexpressed strain when compared to wildtype bacilli. The CodY overexpressed strain showed chaining phenotype during growth in liquid media and pellicle.

  3. [Pollution load and the first flush effect of BOD5 and COD in urban runoff of Wenzhou City].

    Science.gov (United States)

    Wang, Jun; Bi, Chun-juan; Chen, Zhen-lou; Zhou, Dong

    2013-05-01

    Four typical rainfalls were monitored in two different research areas of Wenzhou Municipality. Concentrations of BOD5 and COD in six different urban runoffs were measured. In addition the event mean concentration (EMC), M (V) curve and BOD5/COD of pollutant were calculated. The results showed that concentrations of BOD5 and COD in different urban runoffs of Wenzhou ranged from ND to 69.21 mg x L(-1) and ND to 636 mg x L(-1). Concentrations of BOD5 and COD in different urban runoffs were decreasing over time, so it is greatly significant to manage the initial runoff for reducing organic pollution. Judged by EMC of BOD5 and COD in these five rainfalls, concentrations of pollutant in some urban runoffs were out of the integrated wastewater discharge standard. If these runoffs flowed into river, it would cause environmental pressure to the next level receiving water bodies. According to the M (V) curve, the first flush effect of COD in most urban runoffs was common; while the first flush effect of BOD5 was same as that of COD. The result also showed that organic pollution was serious at the beginning of runoff. The underlying surface type could affect the concentration of BOD5 and COD in urban runoff. While the results of BOD5/COD also suggested that biodegradation was considered as one of the effective ways to decrease the pollution load of organics in urban runoff, and the best management plans (BMPs) should be selected for various urban runoff types for the treatment of organic pollution.

  4. Improving selectivity of the Baltic cod pelagic trawl fishery: Experiments to assess the next step

    DEFF Research Database (Denmark)

    Madsen, Niels; Tschernij, Vesa; Holst, René

    2010-01-01

    Due to declining cod (Gadus morhua) stocks, the Baltic Sea was one of the first areas regulated by the European Communities where selective escape windows were implemented to improve the exploitation pattern. Increasing discard rates and the potential for a significant increase of the spawning...... stock and the yield of the fishery are important reasons to further improve the selectivity of the fishery and to asses the potential next step in this process. In this study, we tested three relatively different design concepts, in the Baltic cod pelagic trawl fishery, that are relevant to past...... or present legislation and that were developed to meet requirements of increased selectivity performance. A standard nominal 135 mm diamond mesh codend, a codend with two nominal 125 mm bottom windows, and a codend with a nominal 125 mm nominal top window were tested using the covered codend method. A Danish...

  5. Development of new concepts for escape windows to minimise cod catches in Norway lobster fisheries

    DEFF Research Database (Denmark)

    Madsen, Niels; Frandsen, Rikke; Holst, René;

    2010-01-01

    —where a 300 mm window is placed at the top section at about 3–6 m from the codline. Acoustic release technology was used to avoid catch loss during gear retrieval. Sea trials were conducted in the Skagerrak and Kattegat from a commercial trawler. The sorting box yielded a high reduction of the cod catch...... particularly on moving the window further back, gaining more stability in the codend to avoid loss of Norway lobster through the window, making a relatively narrow section where the window is located, and testing larger mesh sizes in the window. We designed a four panel sorting section—the sorting box......, but no improvement was observed for cod that came into contact with the window after reducing the distance from the window to the codline. The sorting box also showed a high reduction of flatfish and other roundfish species. The retention of Norway lobster above minimum landing size in the sorting box was higher...

  6. Prediction of chemical, physical and sensory data from process parameters for frozen cod using multivariate analysis

    DEFF Research Database (Denmark)

    Bechmann, Iben Ellegaard; Jensen, H.S.; Bøknæs, Niels

    1998-01-01

    Physical, chemical and sensory quality parameters were determined for 115 cod (Gadus morhua) samples stored under varying frozen storage conditions. Five different process parameters (period of frozen storage, frozen storage. temperature, place of catch, season for catching and state of rigor) were...... varied systematically at two levels. The data obtained were evaluated using the multivariate methods, principal component analysis (PCA) and partial least squares (PLS) regression. The PCA models were used to identify which process parameters were actually most important for the quality of the frozen cod....... PLS models that were able to predict the physical, chemical and sensory quality parameters from the process parameters of the frozen raw material were generated. The prediction abilities of the PLS models were good enough to give reasonable results even when the process parameters were characterised...

  7. Location of and post-mortem changes in some cytoskeletal proteins in pork and cod muscle

    DEFF Research Database (Denmark)

    Morrison, E.H.; Bremner, Allan; Purslow, P.P.

    2000-01-01

    The cytoskeletal proteins actin, nebulin, spectrin, desmin, vinculin and talin were labelled immunohistochemically in sections of muscle from commercially available pigs and cod (Gadus morhua) taken pre-rigor and from samples stored for several days. Actin, nebulin and spectrin gave similar...... labelling in fish. Labelling for talin in pork muscle was intense at the sarcolemma but was not present in samples stored for 4 days. In contrast, the label for talin was concentrated at the myotendinous junction of the cod muscle throughout the storage period. These are the first reports of the detection...... and location of spectrin and vinculin in fish muscle and of the location of talin. The results are discussed in terms of muscle structure, function and post-mortem tenderisation. (C) 2000 Society of Chemical Industry....

  8. PENURUNAN NILAI COD PADA PESTISIDA SIPERMETRIN DENGAN FOTOKATALIS TITANIUM(IV OKSIDA-PLATINA

    Directory of Open Access Journals (Sweden)

    Diana Rakhmawaty Eddy

    2014-11-01

    Full Text Available Pada penelitian ini telah dilakukan fotodegradasi pestisida jenis sipermetrin dengan adanya fotokatalis titanium (IV oksida-platina. Fotokatalis tersebut dibuat dengan merefluks larutan titanium(IV oksida tetraminplatina(II klorida selama 2 jam kemudian diuapkan pelarutnya dan dipanaskan selama 12 jam. Padatan fotokatalis kemudian dikalsinasi selama 3 jam pada 500 °C. Hasil sintesis titanium(IV oksida-platina 0,5% dan 1% dikarakterisasi dengan XRD, SEM, dan SEM-EDX. Kemampuan dalam mengkatalisis fotodegradasi diuji untuk pestisida sipermetrin yang dilakukan selama 4 jam. Hasil fotodegradasi dinyatakan sebagai COD (Chemical Oxygen Demand yang diukur setiap 1 jam. Penurunan COD terbesar untuk titanium(IV oksida platina 0,5% dan titanium(IV oksida-platina 1% masing-masing yaitu 77% dan 79%. Sementara TiO2 standar sebesar 68,42 %. Fotokatalis titanium(IV oksida-platina lebih baik dibanding titanium(IV oksida untuk degradasi sipermetrin.

  9. Male reproductive competition in spawning aggregations of cod ( Gadus morhua , L.)

    DEFF Research Database (Denmark)

    Bekkevold, Dorte; Hansen, Michael Møller; Loeschcke, V.

    2002-01-01

    Reproductive competition may lead to a large skew in reproductive success among individuals. Very few studies have analysed the paternity contribution of individual males in spawning aggregations of fish species with huge census population sizes. We quantified the variance in male reproductive...... success in spawning aggregations of cod under experimental conditions over an entire spawning season. Male reproductive success was estimated by microsatellite-based parentage analysis of offspring produced in six separate groups of spawning cod. In total, 1340 offspring and 102 spawnings distributed...... across a spawning season were analysed. Our results show that multiple males contributed sperm to most spawnings but that paternity frequencies were highly skewed among males, with larger males on average siring higher proportions of offspring. It was further indicated that male reproductive success...

  10. Coastal landforms and processes at the Cape Cod National Seashore, Massachusetts—A primer

    Science.gov (United States)

    Giese, Graham S.; Williams, S. Jeffress; Adams, Mark

    2015-12-17

    Anyone who spends more than a few days on Cape Cod (the Cape) quickly becomes a coastal geologist, quickly learning the rhythms of daily tides and the seasonal cycles of beaches growing and being swept away by storms; swimmers and surfers track how the breakers appear, and dog-walkers notice the hard-packed sand blanketed overnight by an airy layer that leaves deep labored tracks.

  11. Antioxidant activity of cod (Gadus morhua) protein hydrolysates: Fractionation and characterisation of peptide fractions

    DEFF Research Database (Denmark)

    Farvin Habebullah, Sabeena; Andersen, Lisa Lystbæk; Otte, Jeanette;

    2016-01-01

    This study aimed to characterise peptide fractions (>5 kDa, 3–5 kDa and antioxidative activity obtained from a cod protein hydrolysate. The free amino acids in all fractions were dominated by Ala, Gly, Glu and Ser. The total amino acid composition had high proportions of Lys, Ala...... to the antioxidative activity of the peptide fractions, and Tyr seemed to play a major role in the antioxidant activity....

  12. Fog and Tidal Current Connection at Cape Cod Canal-Early Recognition and Recent Measurements.

    Science.gov (United States)

    Woodcock, Alfred H.

    1982-02-01

    Notes by Gardner Emmons about the initiation of low advective fogs on Cape Cod are presented. Subsequent measurements made in these fogs confirm his suggestion that mixing and temperature changes associated with tidal currents account for the fog. Puzzling temperature measurements that are at apparent variance with the mixing theory of fog formation are presented. It is proposed that these temperature discrepancies are due to the effects of water vapor condensation on the sea water surface.

  13. Topical Formulation Comprising Fatty Acid Extract from Cod Liver Oil: Development, Evaluation and Stability Studies

    OpenAIRE

    2016-01-01

    The purpose of this study was to develop a pharmaceutical formulation containing fatty acid extract rich in free omega-3 fatty acids such as eicosapentaenoic acid and docosahexaenoic acid for topical use. Although the health benefits of cod liver oil and other fish oils taken orally as a dietary supplement have been acknowledged and exploited, it is clear that their use can be extended further to cover their antibacterial properties. In vitro evaluation showed that 20% (v/v) fatty acid extrac...

  14. Factors determining variations in otolith microincrement width of demersal juvenile Baltic cod Gadus morhua

    DEFF Research Database (Denmark)

    Hüssy, Karin; Mosegaard, Henrik; Hinrichsen, H.H.;

    2003-01-01

    Pelagic and demersal juvenile Baltic cod Gadus morhua L. were collected on the slope and the top of Rønne bank in the Baltic Sea during 2 cruises in November and December 1998. The objective of this study was to evaluate distinct changes in otolith increment width observed in demersal juveniles b......, performed vertical migrations during the second interval, and stayed in association with the seafloor in the subsequent interval, corresponding to the time after the breakdown of the thermocline....

  15. Reducing COD level on oily effluent by utilizing biosurfactant-producing bacteria

    Directory of Open Access Journals (Sweden)

    Daniela Franco Carvalho Jacobucci

    2009-08-01

    Full Text Available Two bacteria isolated from crude oil contaminated soil, Pantoea agglomerans and Planococcus citreus, produced biosurfactants utilizing 1.5% of kerosene and olive oil as the sole carbon sources, respectively. The bacteria and the biosurfactants produced were introduced to oily effluent, arising from margarine and soap industry. Emulsification activities were determined by increases in the absorbance of the oil-in-water emulsions at 610 nm, whereas the water-in-oil emulsions were expressed as the height (cm of the emulsion layers formed. The 72 h incubation experiment resulted in a COD (Chemical Oxygen Demand reduction of 76% with Planococcus citreus strain and 70% with Pantoea agglomerans.The COD reduction with bacterial biosurfactants was over 50% in 24 h of incubation. The COD reduction showed that these strains and the surfactants produced could be used in bioremediation processes.Duas bactérias isoladas de solo contaminado com derivados de petróleo, Pantoea agglomerans e Planococcus citreus, produzem biosurfactantes utilizando respectivamente 1.5% de querosene e óleo de oliva como únicas fontes de carbono. As bactérias e os biosurfactantes produzidos foram adicionados a um efluente oleoso obtido de uma indústria nacional de sabão e margarina. As atividades de emulsificação foram determinadas pelo aumento da absorbância das emulsões óleo em água a 610 nm, enquanto que as emulsões do tipo água em óleo foram expressas em centímetros, pela altura do halo de espumas formado. A redução da demanda química de oxigênio (COD mostra que as linhagens e os biosurfactantes produzidos podem ser utilizados em processos de biorremediação.

  16. Effect of processing on amine formation and the lipid profile of cod (Gadus morhua) roe.

    Science.gov (United States)

    Lapa-Guimarães, Judite; Trattner, Sofia; Pickova, Jana

    2011-12-01

    The processing of fish roe leads to changes in its chemical composition, the extent of which depends on the techniques and additives employed. This study aimed to investigate the effects of ripening temperature and the use of sodium benzoate and citric acid on the quality of ripened cod roe, with respect to the contents of volatile base nitrogen (VBN), trimethylamine (TMA), biogenic amines (BA) and on the lipid composition. In comparison with fresh roes, ripened roes presented higher contents of VBN, TMA, BA and the proportion of free fatty acids regardless of the temperature and additives used during the ripening process. The greatest increases were observed in the samples ripened at 17°C without additives, in which histamine was detected at 8.8mg/100g. A low ripening temperature was the main factor responsible for minimising changes in the cod roe composition. The addition of sodium benzoate as a preservative or citric acid to decrease the pH value had a significant effect in maintaining the quality of the cod roes, mainly at high ripening temperature.

  17. Preparation of Bamboo Chars and Bamboo Activated Carbons to Remove Color and COD from Ink Wastewater.

    Science.gov (United States)

    Hata, Motohide; Amano, Yoshimasa; Thiravetyan, Paitip; Machida, Motoi

    2016-01-01

    Bamboo chars and bamboo activated carbons prepared by steam activation were applied for ink wastewater treatment. Bamboo char at 800 °C was the best for the removal of color and chemical oxygen demand (COD) from ink wastewater compared to bamboo chars at 300 to 700 °C due to higher surface area and mesopore volume. Bamboo activated carbon at 600 °C (S600) was the best compared to bamboo activated carbon at 800 °C (S800), although S800 had larger surface area (1108 m(2)/g) than S600 (734 m(2)/g). S600 had higher mesopore volume (0.20 cm(3)/g) than S800 (0.16 cm(3)/g) and therefore achieved higher color and COD removal. All bamboo activated carbons showed higher color and COD removal efficiency than commercial activated carbon. In addition, S600 had the superior adsorption capacity for methylene blue (0.89 mmol/g). Therefore, bamboo is a suitable material to prepare adsorbents for removal of organic pollutants.

  18. A bio-economic analysis of harvest control rules for the Northeast Arctic cod fishery.

    Science.gov (United States)

    Eikeset, Anne Maria; Richter, Andries P; Dankel, Dorothy J; Dunlop, Erin S; Heino, Mikko; Dieckmann, Ulf; Stenseth, Nils Chr

    2013-05-01

    Harvest control rules (HCRs) have been implemented for many fisheries worldwide. However, in most instances, those HCRs are not based on the explicit feedbacks between stock properties and economic considerations. This paper develops a bio-economic model that evaluates the HCR adopted in 2004 by the Joint Norwegian-Russian Fishery Commission to manage the world's largest cod stock, Northeast Arctic cod (NEA). The model considered here is biologically and economically detailed, and is the first to compare the performance of the stock's current HCR with that of alternative HCRs derived with optimality criteria. In particular, HCRs are optimized for economic objectives including fleet profits, economic welfare, and total yield and the emerging properties are analyzed. The performance of these optimal HCRs was compared with the currently used HCR. This paper show that the current HCR does in fact comes very close to maximizing profits. Furthermore, the results reveal that the HCR that maximizes profits is the most precautionary one among the considered HCRs. Finally, the HCR that maximizes yield leads to un-precautionary low levels of biomass. In these ways, the implementation of the HCR for NEA cod can be viewed as a success story that may provide valuable lessons for other fisheries.

  19. Simultaneous removal of COD and nitrogen using a novel carbon-membrane aerated biofilm reactor

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    A membrane aerated biofilm reactor is a promising technology for wastewater treatment. In this study, a carbon-membrane aerated biofilm reactor (CMABR) has been developed, to remove carbon organics and nitrogen simultaneously from one reactor. The results showed that CMABR has a high chemical oxygen demand (COD) and nitrogen removal efficiency, as it is operated with a hydraulic retention time (HRT) of 20 h, and it also showed a perfect performance, even if the HRT was shortened to 12 h. In this period, the removal efficiencies of COD, ammonia nitrogen (NH4+-N), and total nitrogen (TN) reached 86%, 94%, and 84%, respectively. However,the removal efficiencies of NH4+-N and TN declined rapidly as the HRT was shortened to 8 h. This is because of the excessive growth of biomass on the nonwoven fiber and very high organic loading rate. The fluorescence in situ hybridization (FISH) analysis indicated that the ammonia oxidizing bacteria (AOB) were mainly distributed in the inner layer of the biofilm. The coexistence of AOB and eubacteria in one biofilm can enhance the simultaneous removal of COD and nitrogen.

  20. A bio-economic analysis of harvest control rules for the Northeast Arctic cod fishery

    Science.gov (United States)

    Eikeset, Anne Maria; Richter, Andries P.; Dankel, Dorothy J.; Dunlop, Erin S.; Heino, Mikko; Dieckmann, Ulf; Stenseth, Nils Chr.

    2013-01-01

    Harvest control rules (HCRs) have been implemented for many fisheries worldwide. However, in most instances, those HCRs are not based on the explicit feedbacks between stock properties and economic considerations. This paper develops a bio-economic model that evaluates the HCR adopted in 2004 by the Joint Norwegian–Russian Fishery Commission to manage the world's largest cod stock, Northeast Arctic cod (NEA). The model considered here is biologically and economically detailed, and is the first to compare the performance of the stock's current HCR with that of alternative HCRs derived with optimality criteria. In particular, HCRs are optimized for economic objectives including fleet profits, economic welfare, and total yield and the emerging properties are analyzed. The performance of these optimal HCRs was compared with the currently used HCR. This paper show that the current HCR does in fact comes very close to maximizing profits. Furthermore, the results reveal that the HCR that maximizes profits is the most precautionary one among the considered HCRs. Finally, the HCR that maximizes yield leads to un-precautionary low levels of biomass. In these ways, the implementation of the HCR for NEA cod can be viewed as a success story that may provide valuable lessons for other fisheries. PMID:26525860

  1. Assessing the Role of Environmental Factors on Baltic Cod Recruitment, a Complex Adaptive System Emergent Property

    Directory of Open Access Journals (Sweden)

    Dionysis Krekoukiotis

    2016-07-01

    Full Text Available For decades, fish recruitment has been a subject of intensive research with stock–recruitment models commonly used for recruitment prediction often only explaining a small fraction of the inter-annual recruitment variation. The use of environmental information to improve our ability to predict recruitment, could contribute considerably to fisheries management. However, the problem remains difficult because the mechanisms behind such complex relationships are often poorly understood; this in turn, makes it difficult to determine the forecast estimation robustness, leading to the failure of some relationships when new data become available. The utility of machine learning algorithms such as artificial neural networks (ANNs for solving complex problems has been demonstrated in aquatic studies and has led many researchers to advocate ANNs as an attractive, non-linear alternative to traditional statistical methods. The goal of this study is to design a Baltic cod recruitment model (FishANN that can account for complex ecosystem interactions. To this end, we (1 build a quantitative model representation of the conceptual understanding of the complex ecosystem interactions driving Baltic cod recruitment dynamics, and (2 apply the model to strengthen the current capability to project future changes in Baltic cod recruitment. FishANN is demonstrated to bring multiple stressors together into one model framework and estimate the relative importance of these stressors while interpreting the complex nonlinear interactions between them. Additional requirements to further improve the current study in the future are also proposed.

  2. Assessing the Impact of Policy Changes in the Icelandic Cod Fishery Using a Hybrid Simulation Model

    Directory of Open Access Journals (Sweden)

    Sigríður Sigurðardóttir

    2014-01-01

    Full Text Available Most of the Icelandic cod is caught in bottom trawlers or longliners. These two fishing methods are fundamentally different and have different economic, environmental, and even social effects. In this paper we present a hybrid-simulation framework to assess the impact of changing the ratio between cod quota allocated to vessels with longlines and vessels with bottom trawls. It makes use of conventional bioeconomic models and discrete event modelling and provides a framework for simulating life cycle assessment (LCA for a cod fishery. The model consists of two submodels, a system dynamics model describing the biological aspect of the fishery and a discrete event model for fishing activities. The model was run multiple times for different quota allocation scenarios and results are presented where different scenarios are presented in the three dimensions of sustainability: environmental, social, and economic. The optimal allocation strategy depends on weighing the three different factors. The results were encouraging first-steps towards a useful modelling method but the study would benefit greatly from better data on fishing activities.

  3. Hydroacoustic ex situ target strength measurements on juvenile cod ( Gadus morhua L.)

    DEFF Research Database (Denmark)

    Nielsen, J. Rasmus; Lundgren, Bo

    1999-01-01

    fish were swimming freely during measurement in cages (1 x 1 x 3 m) within the acoustic beam under natural conditions in seawater with a salinity of 30 and a temperature of 11 degrees C. An EY500 split-beam acoustic system was used to detect single fish passing through the acoustic beam field, which......) and length of live juvenile cod (7-10 cm and 15-20 cm) at 120 kHz. This was done by recording the variation in TS of freely swimming cod tracking single fish targets for the two size groups within the acoustic beam held. The experiment was set up in an open air 2000 m(3) tank where the small 5-10 cm long...... was Video recorded in order to isolate the measurements on single targets and to get an indication of their angle. A mean target strength-to-size relation was calculated for small cod based on single fish tracks with total acoustic angles below 3.5 degrees off axis in the beam field. This relationship...

  4. Do North Sea cod (Gadus morhua) fisheries maintain high catch rates at low stock size?

    DEFF Research Database (Denmark)

    Rindorf, Anna; Andersen, Bo Sølgaard

    2008-01-01

    This study presents all investigation of the relationship between stock size of North Sea cod (Gadus morhua) and catch rates in seven commercial fishing fleets. The shape of the relationship was estimated using a model allowing both density-dependent changes in catchability and bias in the assess......This study presents all investigation of the relationship between stock size of North Sea cod (Gadus morhua) and catch rates in seven commercial fishing fleets. The shape of the relationship was estimated using a model allowing both density-dependent changes in catchability and bias...... in the assessment biomass estimates. Catchability in fisheries targeting a mixed species composition either remained constant or decreased with decreasing stock size, whereas catchability in targeted cod fisheries increased with decreasing stock size. However, even ill the cases where catchability increased......, the change was insufficient to compensate for the decrease in stock size, and catch rates of all fleets decreased. Two factors that could lead to nonconstant catchability were investigated: (i) the presence of decoupling between stock size and density ill high-density areas and (ii) the presence...

  5. Removal of colour and COD from wastewater containing acid blue 22 by electrochemical oxidation

    Energy Technology Data Exchange (ETDEWEB)

    Panizza, Marco [Dipartimento di Ingegneria Chimica e di Processo ' G.B. Bonino' , Universita degli Studi di Genova, p.le J.F. Kennedy 1, 16129 Genova (Italy)], E-mail: marco.panizza@unige.it; Cerisola, Giacomo [Dipartimento di Ingegneria Chimica e di Processo ' G.B. Bonino' , Universita degli Studi di Genova, p.le J.F. Kennedy 1, 16129 Genova (Italy)

    2008-05-01

    Electrochemical oxidation of synthetic wastewater containing acid blue 22 on a boron-doped diamond electrode (BDD) was studied, using cyclic voltammetry and bulk electrolysis. The influence of current density, dye concentration, flow rate, and temperature was investigated, in order to find the best conditions for COD and colour removal. It was found that, during oxidation, a polymeric film, causing BDD deactivation, was formed in the potential region of water stability, and that it was removed by anodic polarisation at high potentials in the region of O{sub 2} evolution. Bulk electrolysis results showed that the electrochemical process was suitable for completely removing COD and effectively decolourising wastewaters, due to the production of hydroxyl radicals on the diamond surface. In particular, under optimal experimental conditions of flow rates (i.e. 300 dm{sup 3} h{sup -1}) and current density (i.e. 20 mA cm{sup -2}), 97% of COD was removed in 12 h electrolysis, with 70 kWh m{sup -3}energy consumption.

  6. Reduction Of Cod And Bod By Oxidation: A Cetp Case Study

    Directory of Open Access Journals (Sweden)

    Prashant K. Lalwani, Malu D. Devadasan

    2013-05-01

    Full Text Available The present study is focused on a Common Effluent Treatment Plant (CETP located at Umaraya, District Baroda. Waste water from about thirty five small and medium scale industries majorly comprising of chemical manufacturing and pharmaceutical industries are treated in this CETP. The incoming wastewater was collected and segregated into three groups as per their BOD/COD ratio. They were then oxidized independently by two oxidants Fenton’s reagent (Fe2+/H2O2 and Sodium Hypochlorite (NaOCl and reduction in COD and BOD were observed at different chlorine, H2O2, FeSO4 doses, different pH values and contact time for determining the optimum values. COD and BOD values at optimized conditions for the two oxidants were compared and observed that maximum reduction of 64.35% and 68.57% respectively was achieved by Fenton’s reagent. The results clearly indicate that conventional system should be replaced by advanced oxidation process and Fenton’s reagent is a suitable choice.

  7. Assessing the impact of policy changes in the Icelandic cod fishery using a hybrid simulation model.

    Science.gov (United States)

    Sigurðardóttir, Sigríður; Johansson, Björn; Margeirsson, Sveinn; Viðarsson, Jónas R

    2014-01-01

    Most of the Icelandic cod is caught in bottom trawlers or longliners. These two fishing methods are fundamentally different and have different economic, environmental, and even social effects. In this paper we present a hybrid-simulation framework to assess the impact of changing the ratio between cod quota allocated to vessels with longlines and vessels with bottom trawls. It makes use of conventional bioeconomic models and discrete event modelling and provides a framework for simulating life cycle assessment (LCA) for a cod fishery. The model consists of two submodels, a system dynamics model describing the biological aspect of the fishery and a discrete event model for fishing activities. The model was run multiple times for different quota allocation scenarios and results are presented where different scenarios are presented in the three dimensions of sustainability: environmental, social, and economic. The optimal allocation strategy depends on weighing the three different factors. The results were encouraging first-steps towards a useful modelling method but the study would benefit greatly from better data on fishing activities.

  8. Historical ecology provides new insights for ecosystem management: Eastern Baltic cod case study

    DEFF Research Database (Denmark)

    MacKenzie, Brian; Ojaveer, Henn; Eero, Margit

    2011-01-01

    A recent historical marine ecological case study (cod in the eastern Baltic Sea) is used to show how long-term data and knowledge of fluctuations can contribute to revisions of fishery management policy. The case study first developed new longer analytical time series of spawner biomass and recru......A recent historical marine ecological case study (cod in the eastern Baltic Sea) is used to show how long-term data and knowledge of fluctuations can contribute to revisions of fishery management policy. The case study first developed new longer analytical time series of spawner biomass...... and recruitment back to the 1920s, which extended knowledge of population dynamics into a time period when ecosystem state was characterized by temporally varying combinations of exploitation, climate-hydrographic conditions, marine mammal predation and eutrophication. Recovery of spatially resolved historical...... catch data from the late 1500s to early 1600s also contributed new perspectives to cod population dynamics under alternative ecosystem forcings. These new perspectives have contributed, and will likely continue to contribute to new management policies (e.g., revision of fishery management reference...

  9. Performance evaluation of low cost adsorbents in reduction of COD in sugar industrial effluent.

    Science.gov (United States)

    Parande, Anand K; Sivashanmugam, A; Beulah, H; Palaniswamy, N

    2009-09-15

    Studies on reduction of chemical oxygen demand (COD) in effluent from sugar industry have been carried out by employing different absorbents optimizing various parameters, such as initial concentration of adsorbate, pH, adsorbent dosage and contact time. Experimental studies were carried out in batches using metakaolin, tamarind nut carbon and dates nut carbon as adsorbents by keeping initial adsorbent dosage at 1 g l(-1), agitation time over a range of 30-240 min, adsorbent dosage at 100-800 mg l(-1) by varying the pH range from 4 to 10. Characterization of there adsorbents were done using techniques such as Fourier transforms infra red spectroscopy (FTIR), X-ray diffraction (XRD) and scanning electron microscope (SEM). The experimental adsorption data fitted well to Langmuir and Freundlich adsorption isotherms. The isotherms of the adsorbents indicate appreciable adsorption capacity. Higher COD removal was observed at neutral pH conditions. Studies reveal that maximum reduction efficiency of COD takes place using metakaolin as an absorbent at a dosage of 500 mg l(-1) in a contact time of 180 min at pH 7 and it could be used as an efficient absorbent for treating sugar industrial effluent.

  10. Continuous Resistivity Profile Tracklines of Data Collected from Cape Cod National Seashore, May 17-20, 2004

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Continuous resistivity profiling (CRP) surveys were conducted at Cape Cod National Seashore in 2004 and 2006 in order to test hypotheses about groundwater flow...

  11. Point Shapefile with a Point Every 100 meters along the Cape Cod National Seashore Resistivity Survey tracklines, Feb. 28, 2006

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Continuous resistivity profiling (CRP) surveys were conducted at Cape Cod National Seashore in 2004 and 2006 in order to test hypotheses about groundwater flow...

  12. Sedimentary Environments of the Sea Floor off Eastern Cape Cod, Massachusetts (CC_ENVIRON.SHP, Geographic, WGS84)

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This data set includes the sedimentary environments for the sea floor offshore of northern and eastern Cape Cod, Massachusetts. This interpretation is based on data...

  13. Causes of different impact of Major Baltic Inflows on cod reproduction in the Gotland Basin of the Baltic Sea

    Science.gov (United States)

    Karaseva, E. M.; Zezera, A. S.

    2016-09-01

    The impact of the Major Baltic Inflows (MBIs) of 1976, 1993, and 2003 on cod reproduction in the Gotland Basin of the Baltic Sea is considered based on calculations of the eastern Baltic cod egg abundance and offspring survival indices. The reproductive success (1976-1977) was defined by the elevation of the 11 psu isohaline and deepening of the 2 mL/L isooxygene surface, which provided the formation of a water layer suitable for cod spawning at a depth of 90-130 m. Prerequisites of the appearance of the reproductive layer in 1976-1977 were a previously high salinity level and penetrating two successive MBIs in one year. The cause of the weak MBI impact in 1993 was the previous salinity minimum; in 2003 it was rapid oxygen depletion due to an increase in temperature. As a result of their weaker influence, small and fragmented cod spawning biotopes appeared in the Gotland Basin.

  14. Crystallography Open Database (COD): an open-access collection of crystal structures and platform for world-wide collaboration.

    Science.gov (United States)

    Gražulis, Saulius; Daškevič, Adriana; Merkys, Andrius; Chateigner, Daniel; Lutterotti, Luca; Quirós, Miguel; Serebryanaya, Nadezhda R; Moeck, Peter; Downs, Robert T; Le Bail, Armel

    2012-01-01

    Using an open-access distribution model, the Crystallography Open Database (COD, http://www.crystallography.net) collects all known 'small molecule / small to medium sized unit cell' crystal structures and makes them available freely on the Internet. As of today, the COD has aggregated ~150,000 structures, offering basic search capabilities and the possibility to download the whole database, or parts thereof using a variety of standard open communication protocols. A newly developed website provides capabilities for all registered users to deposit published and so far unpublished structures as personal communications or pre-publication depositions. Such a setup enables extension of the COD database by many users simultaneously. This increases the possibilities for growth of the COD database, and is the first step towards establishing a world wide Internet-based collaborative platform dedicated to the collection and curation of structural knowledge.

  15. Continuous Resistivity Profile Tracklines of Data Collected from Cape Cod National Seashore, May 17-20, 2004

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Continuous resistivity profiling (CRP) surveys were conducted at Cape Cod National Seashore in 2004 and 2006 in order to test hypotheses about groundwater flow under...

  16. Point Shapefile with a Point Every 100 meters along the Cape Cod National Seashore Resistivity Survey tracklines, Feb. 28, 2006

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Continuous resistivity profiling (CRP) surveys were conducted at Cape Cod National Seashore in 2004 and 2006 in order to test hypotheses about groundwater flow under...

  17. Identifying eastern Baltic cod nursery grounds using hydrodynamic modelling: knowledge for the design of Marine Protected Areas

    DEFF Research Database (Denmark)

    Hinrichsen, Hans-Harald; Kraus, Gerd; Böttcher, Uwe

    2009-01-01

    Knowledge of the spatial and temporal distribution of juvenile cod is essential to closing the life cycle in population dynamic models, and it is a prerequisite for the design of Marine Protected Areas (MPAs) aiming at the protection of juveniles. In this study, we use a hydrodynamic model...... evidence that the final destinations of juvenile cod drift routes are affected by decadal climate variability. Application of the methodology to MPA design is discussed, e.g. identifying the overlap of areas with a high probability of successful juvenile cod settlement and regions of high fishing effort...... to examine the spatial distribution of eastern Baltic cod larvae and early juveniles. The transport patterns of the larvae spawned at the three major spawning grounds in the central Baltic Sea were investigated by drift model simulations for the period 1979–2004. We analysed potential habitats...

  18. AFSC/RACE/FBEP/Hurst: Contrasting coastal and shelf nursery habitats of Pacific cod in the southeastern Bering Sea

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This dataset is from a study examining the use of demersal and pelagic habitats in the southeast Bering Sea by age-0 Pacific cod, based on 4 years of demersal trawl...

  19. 78 FR 23683 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Cod by Catcher/Processors Using...

    Science.gov (United States)

    2013-04-22

    ... fisheries data in a timely fashion and would delay the directed fishing closure of Pacific cod for C/Ps..., Acting Deputy Director, Office of Sustainable Fisheries, National Marine Fisheries Service. BILLING...

  20. 77 FR 11412 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Cod by Catcher Vessels Using Trawl...

    Science.gov (United States)

    2012-02-27

    ... a timely fashion and would delay the directed fishing closure of Pacific cod for CVs using trawl... Director, Office of Sustainable Fisheries, National Marine Fisheries Service. BILLING CODE 3510-22-P...

  1. 77 FR 8177 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Cod by Vessels Using Pot Gear in the...

    Science.gov (United States)

    2012-02-14

    ... a timely fashion and would delay the directed fishing closure of Pacific cod for vessels using pot... Director, Office of Sustainable Fisheries, National Marine Fisheries Service. BILLING CODE 3510-22-P...

  2. 75 FR 8840 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Cod by Catcher/Processors Using Pot...

    Science.gov (United States)

    2010-02-26

    ... the most recent fisheries data in a timely fashion and would delay the closure of Pacific cod by pot..., Office of Sustainable Fisheries, National Marine Fisheries Service. BILLING CODE 3510-22-S...

  3. 78 FR 18528 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Cod by Catcher Vessels Using Trawl...

    Science.gov (United States)

    2013-03-27

    ... a timely fashion and would delay the directed fishing closure of Pacific cod for CVs using trawl... Director, Office of Sustainable Fisheries, National Marine Fisheries Service. BILLING CODE 3510-22-P...

  4. 78 FR 17885 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Cod by Catcher Vessels Less Than 50...

    Science.gov (United States)

    2013-03-25

    ... a timely fashion and would delay the closure of directed fishing for Pacific cod by CVs less than 50...: March 20, 2013. Kara Meckley, Acting Deputy Director, Office of Sustainable Fisheries, National...

  5. 78 FR 55228 - Fisheries of the Exclusive Economic Zone Off Alaska; Reallocation of Pacific Cod in the Western...

    Science.gov (United States)

    2013-09-10

    ... fisheries data in a timely fashion and would delay the reallocation of Pacific cod specified from trawl C/Ps...: September 5, 2013. James P. Burgess, Acting Deputy Director, Office of Sustainable Fisheries,...

  6. 78 FR 48653 - Fisheries of the South Atlantic; South Atlantic Fishery Management Council; Public Meeting

    Science.gov (United States)

    2013-08-09

    ... Fishery Management Council (SAFMC) Scientific and Statistical Committee (SSC). SUMMARY: The SAFMC will... Atlantic Fishery Management Council; Public Meeting AGENCY: National Marine Fisheries Service (NMFS...: South Atlantic Fishery Management Council, 4055 Faber Place Drive, Suite 201, N. Charleston, SC...

  7. The effect of microbubbles on gas-liquid mass transfer coefficient and degradation rate of COD in wastewater treatment.

    Science.gov (United States)

    Yao, Kangning; Chi, Yong; Wang, Fei; Yan, Jianhua; Ni, Mingjiang; Cen, Kefa

    2016-01-01

    A commonly used aeration device at present has the disadvantages of low mass transfer rate because the generated bubbles are several millimeters in diameter which are much bigger than microbubbles. Therefore, the effect of a microbubble on gas-liquid mass transfer and wastewater treatment process was investigated. To evaluate the effect of each bubble type, the volumetric mass transfer coefficients for microbubbles and conventional bubbles were determined. The volumetric mass transfer coefficient was 0.02905 s(-1) and 0.02191 s(-1) at a gas flow rate of 0.67 L min(-1) in tap water for microbubbles and conventional bubbles, respectively. The degradation rate of simulated municipal wastewater was also investigated, using aerobic activated sludge and ozone. Compared with the conventional bubble generator, the chemical oxygen demand (COD) removal rate was 2.04, 5.9, 3.26 times higher than those of the conventional bubble contactor at the same initial COD concentration of COD 200 mg L(-1), 400 mg L(-1), and 600 mg L(-1), while aerobic activated sludge was used. For the ozonation process, the rate of COD removal using microbubble generator was 2.38, 2.51, 2.89 times of those of the conventional bubble generator. Based on the results, the effect of initial COD concentration on the specific COD degradation rate were discussed in different systems. Thus, the results revealed that microbubbles could enhance mass transfer in wastewater treatment and be an effective method to improve the degradation of wastewater.

  8. [Effects of COD/TN and HRT(s) on nutrients removal by an alternating anoxic/oxic CAST].

    Science.gov (United States)

    Wang, Li; Peng, Yong-Zhen; Ma, Juan; Liu, Yang; Ma, Ning-Ping

    2010-10-01

    The effects of different COD/TN and HRT(s) (hydraulic retention time of select) on nutrients removal were investigated by using an alternating anoxic/oxic CAST (cyclic activated sludge technology) fed with municipal wastewater. The results showed that various COD/TN and HRT(s) had a bigger influence on the nitrogen removal efficiency rather than the COD removal efficiency. As the influent C/N ratios were about 2.6 and 3.5, ammonia was removed by 98% and TN removal efficiency was increased from 62.9% to 76.2% and 72.1% to 84.6%, respectively, by increasing the HRT(s) from 1.8 h to 5 h. When the COD/TN ratio was increased to about 4.4, TN removal efficiency was decreased from 86.3% to 58.2% by enlarging the HRT(s), which was due to the incomplete nitrification of ammonia. It was also observed that both of increasing the COD/TN and HRT(s) could improve the phosphorus removal performance of the system. Furthermore, effluent of CAST reached the demanded A of integrated wastewater discharge standards (GB 18918-2002) when the COD/TN and HRT(s) were 4.4 and 1.8 h, respectively.

  9. A study on the relationship between BOD5 and COD in coastal seawater environment with a rapid BOD measurement system.

    Science.gov (United States)

    Jin, X L; Jing, M; Chen, X; Zhuang, Z X; Wang, X R; Wang, X R; Lee, Frank S C

    2009-01-01

    The dual objectives of this study are to: (1) examine the relationship between COD and BOD in seawater environment with a rapid but reliable method for the measurement of BOD in seawater, and (2) establish the relationship model between BOD(5) and COD in the firth of Dongbao River to predict the values of BOD(5). The first objective is met by the successful development of a technique utilizing bacteria-immobilized membrane flow cell for biodegradation process, coupled with fibre optic fluorescence detection for oxygen depletion quantitation. The technique has been applied to coastal seawater samples collected in the coastal area of Shenzhen, China. The BOD(5) and COD values for the samples are acquired and the results show that there is no apparent linear relationship existing between BOD(5) and COD in relatively clean seawater samples away from the shore. However, in estuary water samples containing relatively high concentration of sewage contamination, a linear correlation does exist between BOD(5) and COD. The linear relationship between the two parameters allows for the calculation of BOD(5) values based on COD data which can be measured more readily and precisely.

  10. Transformation of tomato with a bacterial codA gene enhances tolerance to salt and water stresses.

    Science.gov (United States)

    Goel, Deepa; Singh, Ajay K; Yadav, Vichita; Babbar, Shashi B; Murata, Norio; Bansal, Kailash C

    2011-07-15

    Genetically engineered tomato (Lycopersicon esculentum) with the ability to synthesize glycinebetaine was generated by introducing the codA gene encoding choline oxidase from Arthrobacter globiformis. Integration of the codA gene in transgenic tomato plants was verified by PCR analysis and DNA blot hybridization. Transgenic expression of gene was verified by RT-PCR analysis and RNA blot hybridization. The codA-transgenic plants showed higher tolerance to salt stress during seed germination, and subsequent growth of young seedlings than wild-type plants. The codA transgene enhanced the salt tolerance of whole plants and leaves. Mature leaves of codA-transgenic plants revealed higher levels of relative water content, chlorophyll content, and proline content than those of wild-type plants under salt and water stresses. Results from the current study suggest that the expression of the codA gene in transgenic tomato plants induces the synthesis of glycinebetaine and improves the tolerance of plants to salt and water stresses.

  11. 78 FR 59916 - Fisheries of the South Atlantic; South Atlantic Fishery Management Council; Public Meeting

    Science.gov (United States)

    2013-09-30

    .... SUMMARY: The South Atlantic Fishery Management Council (SAFMC) will hold a meeting of its Scientific and... Atlantic Fishery Management Council; Public Meeting AGENCY: National Marine Fisheries Service (NMFS...; fax: (843) 744- 4472. Council address: South Atlantic Fishery Management Council, 4055 Faber...

  12. 75 FR 44938 - Atlantic Coastal Fisheries Cooperative Management Act Provisions; Atlantic Coastal Shark Fishery

    Science.gov (United States)

    2010-07-30

    ... 0648-XX28 Atlantic Coastal Fisheries Cooperative Management Act Provisions; Atlantic Coastal Shark... cancellation of the Federal moratorium on fishing for Atlantic coastal sharks in the State waters of New Jersey... Sharks (Coastal Shark Plan). DATES: Effective July 30, 2010. ADDRESSES: Emily Menashes, Acting...

  13. 76 FR 67121 - Atlantic Highly Migratory Species; 2012 Atlantic Shark Commercial Fishing Season

    Science.gov (United States)

    2011-10-31

    ... Species; 2012 Atlantic Shark Commercial Fishing Season AGENCY: National Marine Fisheries Service (NMFS... season for the Atlantic commercial shark fisheries. Quotas would be adjusted based on any over- and/or underharvests experienced during the 2010 and 2011 Atlantic commercial shark fishing seasons. In addition,...

  14. 77 FR 61562 - Atlantic Highly Migratory Species; 2013 Atlantic Shark Commercial Fishing Season

    Science.gov (United States)

    2012-10-10

    ... Species; 2013 Atlantic Shark Commercial Fishing Season AGENCY: National Marine Fisheries Service (NMFS... season for the Atlantic commercial shark fisheries. Quotas would be adjusted as allowable based on any over- and/or underharvests experienced during the 2011 and 2012 Atlantic commercial shark...

  15. 77 FR 3393 - Atlantic Highly Migratory Species; 2012 Atlantic Shark Commercial Fishing Season

    Science.gov (United States)

    2012-01-24

    ...; 2012 Atlantic Shark Commercial Fishing Season AGENCY: National Marine Fisheries Service (NMFS... season for the Atlantic commercial shark fisheries. Quotas were adjusted based on over- and/or underharvests experienced during the 2010 and 2011 Atlantic commercial shark fishing seasons. In addition,...

  16. Dangerous dining: surface foraging of North Atlantic right whales increases risk of vessel collisions.

    Science.gov (United States)

    Parks, Susan E; Warren, Joseph D; Stamieszkin, Karen; Mayo, Charles A; Wiley, David

    2012-02-23

    North Atlantic right whales are critically endangered and, despite international protection from whaling, significant numbers die from collisions with ships. Large groups of right whales migrate to the coastal waters of New England during the late winter and early spring to feed in an area with large numbers of vessels. North Atlantic right whales have the largest per capita record of vessel strikes of any large whale population in the world. Right whale feeding behaviour in Cape Cod Bay (CCB) probably contributes to risk of collisions with ships. In this study, feeding right whales tagged with archival suction cup tags spent the majority of their time just below the water's surface where they cannot be seen but are shallow enough to be vulnerable to ship strike. Habitat surveys show that large patches of right whale prey are common in the upper 5 m of the water column in CCB during spring. These results indicate that the typical spring-time foraging ecology of right whales may contribute to their high level of mortality from vessel collisions. The results of this study suggest that remote acoustic detection of prey aggregations may be a useful supplement to the management and conservation of right whales.

  17. North Atlantic summers have warmed more than winters since 1353, and the response of marine zooplankton

    Science.gov (United States)

    Kamenos, Nicholas A.

    2010-01-01

    Modeling and measurements show that Atlantic marine temperatures are rising; however, the low temporal resolution of models and restricted spatial resolution of measurements (i) mask regional details critical for determining the rate and extent of climate variability, and (ii) prevent robust determination of climatic impacts on marine ecosystems. To address both issues for the North East Atlantic, a fortnightly resolution marine climate record from 1353–2006 was constructed for shallow inshore waters and compared to changes in marine zooplankton abundance. For the first time summer marine temperatures are shown to have increased nearly twice as much as winter temperatures since 1353. Additional climatic instability began in 1700 characterized by ∼5–65 year climate oscillations that appear to be a recent phenomenon. Enhanced summer-specific warming reduced the abundance of the copepod Calanus finmarchicus, a key food item of cod, and led to significantly lower projected abundances by 2040 than at present. The faster increase of summer marine temperatures has implications for climate projections and affects abundance, and thus biomass, near the base of the marine food web with potentially significant feedback effects for marine food security. PMID:21148422

  18. Parasites as biological tags in marine fisheries research: European Atlantic waters.

    Science.gov (United States)

    Mackenzie, K; Hemmingsen, W

    2015-01-01

    Studies of the use of parasites as biological tags for stock identification and to follow migrations of marine fish, mammals and invertebrates in European Atlantic waters are critically reviewed and evaluated. The region covered includes the North, Baltic, Barents and White Seas plus Icelandic waters, but excludes the Mediterranean and Black Seas. Each fish species or ecological group of species is treated separately. More parasite tag studies have been carried out on Atlantic herring Clupea harengus than on any other species, while cod Gadus morhua have also been the subject of many studies. Other species that have been the subjects of more than one study are: blue whiting Micromesistius poutassou, whiting Merlangius merlangus, haddock Melanogrammus aeglefinus, Norway pout Trisopterus esmarkii, horse mackerel Trachurus trachurus and mackerel Scomber scombrus. Other species are dealt with under the general headings redfishes, flatfish, tunas, anadromous fish, elasmobranchs, marine mammals and invertebrates. A final section highlights how parasites can be, and have been, misused as biological tags, and how this can be avoided. It also reviews recent developments in methodology and parasite genetics, considers the potential effects of climate change on the distributions of both hosts and parasites, and suggests host-parasite systems that should reward further research.

  19. Impacts of COD and DCP loading rates on biological treatment of 2,4-dichlorophenol (DCP) containing wastewater in a perforated tubes biofilm reactor.

    Science.gov (United States)

    Eker, Serkan; Kargi, Fikret

    2006-08-01

    Biofilm processes offer considerable advantages for biological treatment of chlorophenol containing wastewaters since such industrial effluents are difficult to treat by conventional activated sludge processes. A rotating perforated tubes biofilm reactor (RTBR) was developed and used for treatment of 2,4-dichlorophenol (DCP) containing synthetic wastewater. Effects of COD and DCP loading rates on COD, DCP and toxicity removals were investigated. Percent COD removal decreased and effluent COD increased with increasing COD and DCP loading rates due to toxic effects of high DCP content in the feed. DCP and toxicity removals showed similar trends. As the DCP loading rate increased the effluent DCP content increased yielding high toxicity levels in the effluent. COD and DCP loading rates should be below 90gCODm(-2)d(-1) and 2.8gDCPm(-2)d(-1) in order to obtain more than 90% DCP and toxicity removals. However, DCP loading rates lower than 1gDCPm(-2)d(-1) are required to obtain more than 90% COD removal. Empirical equations were developed to estimate percent COD, DCP and toxicity removals as functions of COD and DCP loading rates. The coefficients of the empirical equations were determined by using the experimental data. Empirical model predictions for percent COD, DCP and toxicity removals were in good agreement with the experimental data.

  20. Prevalence of influenza A virus in live-captured North Atlantic gray seals: a possible wild reservoir

    Science.gov (United States)

    Puryear, Wendy Blay; Keogh, Mandy; Hill, Nichola; Moxley, Jerry; Josephson, Elizabeth; Davis, Kimberly Ryan; Bandoro, Chistopher; Lidgard, Damian; Bogomolni, Andrea; Levin, Milton; Lang, Shelley; Hammill, Michael; Bowen, Don; Johnston, David W; Romano, Tracy; Waring, Gordon; Runstadler, Jonathan

    2016-01-01

    Influenza A virus (IAV) has been associated with multiple unusual mortality events (UMEs) in North Atlantic pinnipeds, frequently attributed to spillover of virus from wild-bird reservoirs. To determine if endemic infection persists outside of UMEs, we undertook a multiyear investigation of IAV in healthy, live-captured Northwest Atlantic gray seals (Halichoerus grypus). From 2013 to 2015, we sampled 345 pups and 57 adults from Cape Cod, MA, USA and Nova Scotia, Canada consistently detecting IAV infection across all groups. There was an overall viral prevalence of 9.0% (95% confidence interval (CI): 6.4%–12.5%) in weaned pups and 5.3% (CI: 1.2%–14.6%) in adults, with seroprevalences of 19.3% (CI: 15.0%–24.5%) and 50% (CI: 33.7%–66.4%), respectively. Positive sera showed a broad reactivity to diverse influenza subtypes. IAV status did not correlate with measures of animal health nor impact animal movement or foraging. This study demonstrated that Northwest Atlantic gray seals are both permissive to and tolerant of diverse IAV, possibly representing an endemically infected wild reservoir population. PMID:27485496

  1. Abundance and distribution of Arctic cod (Boreogadus saida) and other pelagic fishes over the U.S. Continental Shelf of the Northern Bering and Chukchi Seas

    Science.gov (United States)

    De Robertis, Alex; Taylor, Kevin; Wilson, Christopher D.; Farley, Edward V.

    2017-01-01

    We conducted acoustic-trawl (AT) surveys of the northern Bering and Chukchi Seas during ice-free periods in 2012 and 2013. The mixed species assemblages in the study area required refinement of standard AT survey methods, and adjustment of trawl catches for the effects of trawl selectivity. Sensitivity analyses indicate that the AT abundance estimates are relatively robust to the assumptions of the analysis. These surveys indicate that midwater fishes are dominated by age-0 Arctic cod (Boreogadus saida), age-0 saffron cod (Eleginus gracilis), capelin (Mallotus villosus), and Pacific herring (Clupea pallasii). In both years, age-0 Arctic cod were distributed principally ≥69.5 °N, age-0 saffron cod were abundant in coastal areas between 66.5 and 69.5 °N, and Pacific herring were distributed south of 67 °N. These three fishes exhibited consistent associations with temperature, salinity and bottom depth: e.g., age-0 Arctic cod were abundant at lower mean water column temperatures than saffron cod. In contrast, capelin were distributed throughout the study area, and were not consistently associated with environmental measures. There was a geographic trend in body length, with smaller Arctic cod, saffron cod and capelin in northern areas, but smaller herring in the south. Arctic cod, saffron cod, herring and capelin were all >2 times more abundant in 2013 than 2012. Sizeable populations of age-0 Arctic cod were observed in the northern Chukchi Sea, which suggests that this area is an important nursery ground. However, relatively few older Arctic cod were observed in this and other surveys of the area, which suggests that either overwinter mortality of age-0 Arctic cod is high, and/or these fish are not retained on the Chukchi shelf.

  2. Electro Coagulation Efficiency in Removal of COD from the Qom Landfill Leahate

    Directory of Open Access Journals (Sweden)

    Mohammad Malakootian

    2012-10-01

    Full Text Available Normal 0 false false false EN-US X-NONE AR-SA MicrosoftInternetExplorer4 Background and Objectives: leachate from municipal solid waste landfill is a strong sewage having hazardous toxic substances. It should be treated by choosing a simple, economical, and eco-friendly method. The aim of this study is reduction of COD from the Qom City landfill leachate using electrocoagulation process.   Materials and Methods: The experimental study was carried out at bench scale using a batch reactor during 2010.  We used a Plexiglas reactor having 0.7 liter capacity, containing nine plate aluminum electrodes connected to a DC power supply (10-60V, 1-5A. Samples were collected in the middle of cell at regular (every 10 minutes time intervals. The concentration of COD was determined using a COD analyzer. The effects of different parameters including current density (52.08, 69.44 mA/cm2, electrolyte time (10, 20,30,40,50 and 60 min, and voltage range (10, 20, 30, 40, 50 and 60 volt were investigated.Results: For a voltage of 60 V and electrolysis time 60 min, the COD removal efficiency was increased from 48.7% for 52.08 mA/cm2 to 77.4% for 69.44 mA/cm2. The highest TSS removal efficiency was obtained at the largest current input when the voltage and electrolysis time were kept at 60V and 60 min respectively.Conclusion: The results showed that the highest COD removal efficiency (77.4% was obtained when the current density was 69.44 Ma/cm2 and the voltage and electrolysis time were kept at 60V and 60 min respectively. Power consumption for this removal level was measured to be 431.26 kWh per kg COD removal. The results obtained revealed that the electrocoagulation technology is an effective treatment process for landfill leachate. st1":*{behavior:url(#ieooui } /* Style Definitions */ table.MsoNormalTable {mso-style-name:"Table Normal"; mso-tstyle-rowband-size:0; mso-tstyle-colband-size:0; mso-style-noshow:yes; mso-style-priority:99; mso-style-qformat:yes; mso

  3. OPTIMASI PENURUNAN NILAI BOD, COD DAN TSS LIMBAH CAIR INDUSTRI TAPIOKA MENGGUNAKAN ARANG AKTIF DARI AMPAS KOPI

    Directory of Open Access Journals (Sweden)

    Irmanto

    2010-05-01

    Full Text Available Activated carbon from coffee dregs for TSS, BOD and COD removal of tapioca industrial wastewater has been developed. The research aimed to know the quality of activated carbon from dregs of coffee as adsorbent, consist of total rendemen, water content, ashes content and iodium adsorption; to know about the optimum contact time and optimum pH from activated carbon on reducing BOD, COD and TSS value from tapioca industrial wastewater and also to know about the decrease percentage of BOD, COD and TSS value using activated carbon from dregs of coffee. Activated carbon from dregs of coffee are activated using HCl 0,1 N and carbonization at 350°C in muffle furnace. Then, activated carbon was contacted with the tapioca industrial wastewater and used on decreasing BOD, COD and TSS value from tapioca industrial wastewater with contact time varieties 0, 10, 30, 60, 90 and 120 minutes and at pH varieties of wastewater 4, 5, 6, 7, 8, 9 and 10. The decreasing of BOD value was measured by Winkler method, decreasing of COD value measured by iodometric method and decreasing of TSS value measured by gravimetric method. The result of the research showed that the activated carbon produced characteristic consist of rendemen 14,55%; water content 3,4%; ashes content 1,88% and iodium adsorption 750,25 mg/g. It is indicated that the activated carbon that is got from dregs of coffee fulfill the criteria required by SNI No. 06-3730-1995. The result of research also showed that the activated carbon from dregs of coffee could be used for reducing the BOD, COD and TSS value in tapioca industrial wastewater at the optimum contact time of 30 minutes and pH 7. The optimum percentage of activated carbon from dregs of coffee in decreasing BOD value of tapioca industrial wastewater are 33,51%; COD value 78,96% and TSS value 61,05%.

  4. Optimization study for Pb(II) and COD sequestration by consortium of sulphate-reducing bacteria

    Science.gov (United States)

    Verma, Anamika; Bishnoi, Narsi R.; Gupta, Asha

    2016-04-01

    In this study, initial minimum inhibitory concentration (MIC) of Pb(II) ions was analysed to check optimum concentration of Pb(II) ions at which the growth of sulphate-reducing consortium (SRC) was found to be maximum. 80 ppm of Pb(II) ions was investigated as minimum inhibitory concentration for SRC. Influence of electron donors such as lactose, sucrose, glucose and sodium lactate was examined to investigate best carbon source for growth and activity of sulphate-reducing bacteria. Sodium lactate was found to be the prime carbon source for SRC. Later optimization of various parameters was executed using Box-Behnken design model of response surface methodology to explore the effectiveness of three independent operating variables, namely, pH (5.0-9.0), temperature (32-42 °C) and time (5.0-9.0 days), on dependent variables, i.e. protein content, precipitation of Pb(II) ions, and removal of COD by SRC biomass. Maximum removal of COD and Pb(II) was observed to be 91 and 98 %, respectively, at pH 7.0 and temperature 37 °C and incubation time 7 days. According to response surface analysis and analysis of variance, the experimental data were perfectly fitted to the quadratic model, and the interactive influence of pH, temperature and time on Pb(II) and COD removal was highly significant. A high regression coefficient between the variables and response (r 2 = 0.9974) corroborate eminent evaluation of experimental data by second-order polynomial regression model. SEM and Fourier transform infrared analysis was performed to investigate morphology of PbS precipitates, sorption mechanism and involved functional groups in metal-free and metal-loaded biomass of SRC for Pb(II) binding.

  5. Fishing cod in the Baltic Sea - Gambling with the ecosystem services

    Science.gov (United States)

    Björkman, Sven; Nordlöf, Anders

    2014-05-01

    The population of cod in the Baltic sea has over the last decades decreased due to overfishing. To make the students aware of this problem and also to find a solution they are introduced to a game. The purpose of the game is to let the students know how to use renewable natural resources in these aspects; 1 Fishing cod without using it up 2 That solidarity is needed if you are sharing a resource 3 That cooperation is the key to keeping a natural resource healthy. The students are fishermen in group of four and are equipped with a boat. The playing board is a map over the Baltic sea. The rules of the game include the carrying capacity of the sea, how much fish one fishing boat is allowed to pick up, how much it costs to have a boat, and possibilities to buy a bigger boat. The game has two rounds: In round one the students in the group are competing against each other, they are not allowed to talk to each other and they are supposed to get as much fish as they can. As a consequence after round one the sea will become empty. In round two the groups compete with each other and they are coworking within the group. After this round the result is different from the first round. The catches are bigger than in round one and still there are cod left in the sea, which will generate a good fishing in the future.. The discussions after the game can be about why the two rounds ended so different, general discussion about "tragedy of the commons", sustainable use of ecosystem services and discussions about resources in common.

  6. [Experimental research of turbidity influence on water quality monitoring of COD in UV-visible spectroscopy].

    Science.gov (United States)

    Tang, Bin; Wei, Biao; Wu, De-Cao; Mi, De-Ling; Zhao, Jing-Xiao; Feng, Peng; Jiang, Shang-Hai; Mao, Ben-Jiang

    2014-11-01

    Eliminating turbidity is a direct effect spectroscopy detection of COD key technical problems. This stems from the UV-visible spectroscopy detected key quality parameters depend on an accurate and effective analysis of water quality parameters analytical model, and turbidity is an important parameter that affects the modeling. In this paper, we selected formazine turbidity solution and standard solution of potassium hydrogen phthalate to study the turbidity affect of UV--visible absorption spectroscopy detection of COD, at the characteristics wavelength of 245, 300, 360 and 560 nm wavelength point several characteristics with the turbidity change in absorbance method of least squares curve fitting, thus analyzes the variation of absorbance with turbidity. The results show, In the ultraviolet range of 240 to 380 nm, as the turbidity caused by particle produces compounds to the organics, it is relatively complicated to test the turbidity affections on the water Ultraviolet spectra; in the visible region of 380 to 780 nm, the turbidity of the spectrum weakens with wavelength increases. Based on this, this paper we study the multiplicative scatter correction method affected by the turbidity of the water sample spectra calibration test, this method can correct water samples spectral affected by turbidity. After treatment, by comparing the spectra before, the results showed that the turbidity caused by wavelength baseline shift points have been effectively corrected, and features in the ultraviolet region has not diminished. Then we make multiplicative scatter correction for the three selected UV liquid-visible absorption spectroscopy, experimental results shows that on the premise of saving the characteristic of the Ultraviolet-Visible absorption spectrum of water samples, which not only improve the quality of COD spectroscopy detection SNR, but also for providing an efficient data conditioning regimen for establishing an accurate of the chemical measurement methods.

  7. SIMULASI PENGARUH KONSENTRASI BIOMASSA PADA LUMPUR AKTIF TERHADAP PENYISIHAN COD DALAM BIOREAKTOR MEMBRAN TERENDAM

    Directory of Open Access Journals (Sweden)

    A. E. Palupi

    2012-02-01

    Full Text Available Proses pengolahan limbah cair dengan bioreaktor membran terendam (BRMt, mempunyai banyak keuntungan dibandingkan proses lumpur aktif konvensional, karena prosesnya lebih sederhana, tidak memerlukan bak sedimentasi sekunder dan kandungan solid dalam efluen (permeat hampir tidak ada. Dalam proses ini melibatkan tiga fasa yaitu padat (biomassa dan komponen-komponen limbah, cair (air dan gas (udara untuk aerasi, dimana degradasi biologis yang terjadi sangat dipengaruhi oleh transfer massa lintas membran, sehingga diperlukan analisa teoritis terhadap proses degradasi limbah pada BRMt dengan model matematis yang dapat menjelaskan fenomena sistemnya, yaitu laju degradasi limbah (SS dan XS, laju pertumbuhan biomassa heterotrop (XBH, laju pembentukan SMP (soluble microbial product, kelarutan oksigen (SO, dan jumlah senyawa organik inert (SI dan XI. Penelitian ini bersifat simulasi yang menggabungkan antara model matematis aktivitas biologis dan performance membran menjadi satu model yang dapat digunakan untuk menghitung COD total pada setiap waktu. Hasil simulasi divalidasi dengan hasil analisa laboratorium dengan limbah cair domestik sintetis sebagai umpan. Secara teoritis, proses degradasi limbah BRMt terdiri dari tujuh komponen yang saling terkait yaitu Ss, Xs, XBH, SSMP, SO, SI dan XI. Model matematis yang diperoleh dapat menjelaskan fenomena terjadinya degradasi limbah domestik sintesis dan akumulasi partikulat inert. Simulasi menunjukkan hasil yang cukup bagus untuk memprediksikan pengolahan limbah cair dengan lumpur aktif dan separasi membran dalam satu reaktor. Dibandingkan dengan hasil percobaan, ditemukan nilai parameter baru untuk pengolahan limbah domestik sintesis dengan lumpur aktif, yaitu YH  = 0,46; μH = 1,5 hari-1; bH = 10,5 hari-1; KS = 1000 g COD/m3; KOH =0,5 g O2/m3; KSMP =15 g COD/m3.

  8. MOLECULAR IDENTIFICATION OF Pseudoterranova azarasi LARVAE IN COD (Gadus sp.) SOLD FOR HUMAN CONSUMPTION IN BRAZIL.

    Science.gov (United States)

    Marigo, Juliana; Taniwaki, Sueli Akemi; Pinto, Pedro Luiz Silva; Soares, Rodrigo Martins; Catão-Dias, José Luiz

    2015-12-01

    Anisakiasis and Pseudoterranovosis are human diseases caused by the ingestion of live Anisakidae larvae in raw, undercooked or lightly marinated fish. Larvae were collected from one salted cod sold for human consumption in a Sao Paulo market in 2013. One section of one brownish larva was used for molecular analyses. The partial COX2 gene sequence from the larva had a nucleotide identity of 99.8 % with Pseudoterranova azarasi, which belongs to the Pseudoterranova decipiens species complex. The risk of allergy when consuming dead larvae in salted fish is not well known and should be considered.

  9. Modeling the cod larvae drift in the Bornholm Basin in summer 1994

    DEFF Research Database (Denmark)

    Hinrichsen, H.H.; Lehmann, A.; St. John, Michael

    1997-01-01

    -dimensional eddy-resolving baroclinic model of the Baltic Sea based on the Bryan-Cox-Semtner code. Larval drift was simulated by the incorporation of a passive tracer into the model utilized to represent individual cod larvae. Additionally, simulated Lagrangian drift trajectories are presented. For model purposes...... with the baroclinic model forced by wind data for the whole Baltic taken from the Europa-Modell (EM) of the German weather service, Offenbach. Verification of simulations was performed by comparison with field measurements of hydrographic variables and ADCP derived current measurements taken during the surveys...

  10. Prey size spectra and prey availability of larval and small juvenile cod

    DEFF Research Database (Denmark)

    Munk, Peter

    1997-01-01

    stage when viewed on a relative predator/prey size scale. The study is based on stomach analysis of larval/juvenile cod in the size range 10-35 mm from nursery grounds in the North Sea. Stomach contents (species, size) were compared to environmental composition and preference indices were calculated...... prey biomass was highest in the areas of a hydrographic front, where larvae have been shown to concentrate. Changes in prey availability with larval growth depend strongly on specific prey biomass spectra at a given location. Both increasing and decreasing prey availability al increasing larval size...

  11. Larval trophodynamics, turbulence, and drift on Georges Bank : A sensitivity analysis of cod and haddock

    DEFF Research Database (Denmark)

    Werner, F.E.; MacKenzie, Brian; Perry, R.I.

    2001-01-01

    Using an individual-based model approach we consider trophodynamic effects on the growth and survival of larval cod (Gadus morhua) and haddock (Melanogrammus aeglefinus) on Georges Bank during late winter/early spring. These studies represent an extension of results described in Werner et al. (1996...... be an important input to larval growth and survival models. The inclusion of turbulence in determining the position of passive larvae in the water column allows the larvae to sample the entire water column, contributing to a decrease in the variance of the size of the larvae over time. The ability of larvae...

  12. A NUMERICAL MODEL OF FAR-FIELD COD CONCENTRATION DISTRIBUTION FOR NATURAL RIVER

    Institute of Scientific and Technical Information of China (English)

    2000-01-01

    A far-field numerical model is developed to simulate jet pollution into natural rivers. Its character is to compute the velocity and pollution concentration separately. The velocity is computed by SIMPLEC algorithm in boundary-fitted coordinate systems. The pollution concentration distribution is computed by developed QUAL-IIm and QAIIL 2D program. The present model was applied to the Xiantao section of the Hanjiang River a tributary of Yangtze River, and Xiangjiang River. The flow field and COD distribution are in good agreement with field data.

  13. Comparison of Correlations between COD and TOC,PV and TOC,COD and PV of Different River Systems in Jilin Province%吉林省不同水系的高锰酸盐指数、化学需氧量和总有机碳的相关关系比较

    Institute of Scientific and Technical Information of China (English)

    袁懋; 董德明; 花修艺; 张立辉

    2008-01-01

    通过对吉林省四大水系的主要河流在2005~2006年内采样,测其高锰酸盐指数(PV)、化学需氧量(COD)和总有机碳(TOC),用最小二乘法对PV-TDC、COD-TOC和COD-PV进行线性回归,并进行相关关系的显著性检验,建立吉林省四大水系主要河流PV-TOC、COD-TOC和COD-PV的定量关系模型.结果表明,吉林省四大水系主要河流中PV-TOC、COD-TOC和COD-PV之间均具有显著的线性相关关系,不同水系的线性相关关系之间存在一定的差异.

  14. COD removal from real semi-coke wastewater by electro-Fenton technology%电芬顿法去除兰炭废水COD

    Institute of Scientific and Technical Information of China (English)

    毕强; 薛娟琴; 郭莹娟; 李国平; 雷美美

    2012-01-01

    An improved electro-Fenton technology with stainless steel anode and cathode of graphite-based gas diffusion electrode is introuced in this work to enhance removal rate of COD in semi-coke wastewater which is famous for high treatment cost as its biodegradation is hard. By several exhaustive experiments, the optimum re- moval rate of COD is up to 78.62% at the optimized conditions in the laboratory of the oxygen sparging rates of 2.5 L/min, the optimal electrode plates distance of 2 cm, current density of 5.2 mA/cm2 , solution pH of 3, and duration of 240 min, which provides a high efficiency pretreatment for semi-coke wastewater, and an promis- ing new method for the treatment of non-biodegradable high concetration wastewater in the future.%为处理高浓度生物难降解兰炭废水,考查了利用不锈钢作阳极和石墨气体扩散电极作阴极构成的电芬顿体系对兰炭废水COD的去除效果。系统地考察了空气流速、电流密度、溶液pH值及极板间距等因素对废水COD去除率的影响。电解过程的较佳条件:空气流速为2.5L/min;电流密度为5.2mA/cm^2;溶液pH值为3;极板间距为2cm。电芬顿法处理兰炭废水240min之后,COD最高去除率可达78.62%,实现了对兰炭废水的预处理,为兰炭废水的处理提供了新的途径。

  15. Comparison of COD removal from pharmaceutical wastewater by electrocoagulation, photoelectrocoagulation, peroxi-electrocoagulation and peroxi-photoelectrocoagulation processes.

    Science.gov (United States)

    Farhadi, Sajjad; Aminzadeh, Behnoush; Torabian, Ali; Khatibikamal, Vahid; Alizadeh Fard, Mohammad

    2012-06-15

    This work makes a comparison between electrocoagulation (EC), photoelectrocoagulation, peroxi-electrocoagulation and peroxi-photoelectrocoagulation processes to investigate the removal of chemical oxygen demand (COD) from pharmaceutical wastewater. The effects of operational parameters such as initial pH, current density, applied voltage, amount of hydrogen peroxide and electrolysis time on COD removal efficiency were investigated and the optimum operating range for each of these operating variables was experimentally determined. In electrocoagulation process, the optimum values of pH and voltage were determined to be 7 and 40 V, respectively. Desired pH and hydrogen peroxide concentration in the Fenton-based processes were found to be 3 and 300 mg/L, respectively. The amounts of COD, pH, electrical conductivity, temperature and total dissolved solids (TDS) were on-line monitored. Results indicated that under the optimum operating range for each process, the COD removal efficiency was in order of peroxi-electrocoagulation > peroxi-photoelectrocoagulation > photoelectrocoagulation>electrocoagulation. Finally, a kinetic study was carried out using the linear pseudo-second-order model and results showed that the pseudo-second-order equation provided the best correlation for the COD removal rate.

  16. Intermediate Levels of Bacillus subtilis CodY Activity Are Required for Derepression of the Branched-Chain Amino Acid Permease, BraB.

    Directory of Open Access Journals (Sweden)

    Boris R Belitsky

    2015-10-01

    Full Text Available The global transcriptional regulator, CodY, binds strongly to the regulatory region of the braB gene, which encodes a Bacillus subtilis branched-chain amino acid (BCAA permease. However, under conditions that maximize CodY activity, braB expression was similar in wild-type and codY null mutant cells. Nonetheless, expression from the braB promoter was significantly elevated in cells containing partially active mutant versions of CodY or in wild-type cells under growth conditions leading to intermediate levels of CodY activity. This novel pattern of regulation was shown to be due to two opposing mechanisms, negative and positive, by which CodY affects braB expression. A strong CodY-binding site located downstream of the transcription start point conferred negative regulation by direct interaction with CodY. Additionally, sequences upstream and downstream of the promoter were required for repression by a second pleiotropic B. subtilis regulator, ScoC, whose own expression is repressed by CodY. ScoC-mediated repression of braB in codY null mutants cells was as efficient as direct, CodY-mediated repression in wild-type cells under conditions of high CodY activity. However, under conditions of reduced CodY activity, CodY-mediated repression was relieved to a greater extent than ScoC-mediated repression was increased, leading to elevated braB expression. We conclude that restricting increased expression of braB to conditions of moderate nutrient limitation is the raison d'être of the feed-forward regulatory loop formed by CodY and ScoC at the braB promoter. The increase in BraB expression only at intermediate activities of CodY may facilitate the uptake of BCAA when they are not in excess but prevent unneeded BraB synthesis when other BCAA transporters are active.

  17. Topical Formulation Comprising Fatty Acid Extract from Cod Liver Oil: Development, Evaluation and Stability Studies.

    Science.gov (United States)

    Ilievska, Biljana; Loftsson, Thorsteinn; Hjalmarsdottir, Martha Asdis; Asgrimsdottir, Gudrun Marta

    2016-06-01

    The purpose of this study was to develop a pharmaceutical formulation containing fatty acid extract rich in free omega-3 fatty acids such as eicosapentaenoic acid and docosahexaenoic acid for topical use. Although the health benefits of cod liver oil and other fish oils taken orally as a dietary supplement have been acknowledged and exploited, it is clear that their use can be extended further to cover their antibacterial properties. In vitro evaluation showed that 20% (v/v) fatty acid extract exhibits good activity against strains of the Gram-positive bacteria Staphylococcus aureus, Enterococcus faecalis, Streptoccoccus pyogenes and Streptoccoccus pneumonia. Therefore, free polyunsaturated fatty acids from cod liver oil or other fish oils can be used as safe and natural antibacterial agents. In this study, ointment compositions containing free fatty acids as active antibacterial agents were prepared by using various natural waxes and characterized. The effects of different waxes, such as carnauba wax, ozokerite wax, laurel wax, beeswax, rice bran wax, candelilla wax and microcrystalline wax, in the concentration range of 1% to 5% (w/w) on the ointment texture, consistency and stability were evaluated. The results showed significant variations in texture, sensory and rheological profiles. This was attributed to the wax's nature and chain composition. Microcrystalline wax gave the best results but laurel wax, beeswax and rice bran wax exhibited excellent texturing, similar sensory profiles and well-balanced rheological properties.

  18. Free-living spirochetes from Cape Cod microbial mats detected by electron microscopy

    Science.gov (United States)

    Teal, T. H.; Chapman, M.; Guillemette, T.; Margulis, L.

    1996-01-01

    Spirochetes from microbial mats and anaerobic mud samples collected in salt marshes were studied by light microscopy, whole mount and thin section transmission electron microscopy. Enriched in cellobiose-rifampin medium, selective for Spirochaeta bajacaliforniensis, seven distinguishable spirochete morphotypes were observed. Their diameters ranged from 0.17 micron to > 0.45 micron. Six of these morphotypes came from southwest Cape Cod, Massachusetts: five from Microcoleus-dominated mat samples collected at Sippewissett salt marsh and one from anoxic mud collected at School Street salt marsh (on the east side of Eel Pond). The seventh morphotype was enriched from anoxic mud sampled from the north central Cape Cod, at the Sandy Neck salt marsh. Five of these morphotypes are similar or identical to previously described spirochetes (Leptospira, Spirochaeta halophila, Spirochaeta bajacaliforniensis, Spirosymplokos deltaeiberi and Treponema), whereas the other two have unique features that suggest they have not been previously described. One of the morphotypes resembles Spirosymplokos deltaeiberi (the largest free-living spirochete described), in its large variable diameter (0.4-3.0 microns), cytoplasmic granules, and spherical (round) bodies with composite structure. This resemblance permits its tentative identification as a Sippewissett strain of Spirosymplokos deltaeiberi. Microbial mats samples collected in sterile Petri dishes and stored dry for more than four years yielded many organisms upon rewetting, including small unidentified spirochetes in at least 4 out of 100 enrichments.

  19. MFC-cascade stacks maximise COD reduction and avoid voltage reversal under adverse conditions.

    Science.gov (United States)

    Ledezma, Pablo; Greenman, John; Ieropoulos, Ioannis

    2013-04-01

    Six continuous-flow Microbial Fuel Cells (MFCs) configured as a vertical cascade and tested under different electrical connections are presented. When in parallel, stable operation and higher power and current densities than individual MFCs were observed, despite substrate imbalances. The cascading dynamic allowed for a cumulative COD reduction of >95% in approximately 5.7h, equivalent to 7.97 kg COD m(-3) d(-1). Under a series configuration, the stack exhibited considerable losses until correct fluidic/electrical insulation of the units was applied, upon which the stack also exhibited superior performance. In both electrical configurations, the 6 MFC system was systematically starved for up to 15 d, with no significant performance degradation. The results from the 14-month trials, demonstrate that cascade-stacking of small units can result in enhanced electricity production (vs single large units) and treatment rates without using expensive catalysts. It is also demonstrated that substrate imbalances and starvation do not necessarily result in cell-voltage reversal.

  20. Nitrate and COD removal in an upflow biofilter under an aerobic atmosphere.

    Science.gov (United States)

    Ji, Bin; Wang, Hongyu; Yang, Kai

    2014-04-01

    A continuous-upflow submerged biofilter packed with ceramsite was constructed for nitrate removal under an aerobic atmosphere. Pseudomonas stutzeri X31, an aerobic denitrifier isolate, was added to the bioreactor as an inoculum. The influent NO3(-)-N concentrations were 63.0-73.8 mg L(-1). The best results were achieved when dissolved oxygen level was 4.6 mg L(-1) and C/N ratio was 4.5. The maximum removal efficiencies of carbon oxygen demand (COD) and NO3(-)-N were 94.04% and 98.48%, respectively at 30°C, when the hydraulic load was 0.75 m h(-1). The top section of the bioreactor possessed less biofilm but higher COD and NO3(-)-N removal rates than the bottom section. Polymerase chain reaction (PCR)-denaturing gradient gel electrophoresis (DGGE) technique combined with electron microscopic examination indicated P. stutzeri X31 and Paracoccus versutus were the most dominant bacteria. Amoeba sp., Vorticella sp., Philodina sp., and Stephanodiscus sp. were also found in the bioreactor.

  1. Topical Formulation Comprising Fatty Acid Extract from Cod Liver Oil: Development, Evaluation and Stability Studies

    Science.gov (United States)

    Ilievska, Biljana; Loftsson, Thorsteinn; Hjalmarsdottir, Martha Asdis; Asgrimsdottir, Gudrun Marta

    2016-01-01

    The purpose of this study was to develop a pharmaceutical formulation containing fatty acid extract rich in free omega-3 fatty acids such as eicosapentaenoic acid and docosahexaenoic acid for topical use. Although the health benefits of cod liver oil and other fish oils taken orally as a dietary supplement have been acknowledged and exploited, it is clear that their use can be extended further to cover their antibacterial properties. In vitro evaluation showed that 20% (v/v) fatty acid extract exhibits good activity against strains of the Gram-positive bacteria Staphylococcus aureus, Enterococcus faecalis, Streptoccoccus pyogenes and Streptoccoccus pneumonia. Therefore, free polyunsaturated fatty acids from cod liver oil or other fish oils can be used as safe and natural antibacterial agents. In this study, ointment compositions containing free fatty acids as active antibacterial agents were prepared by using various natural waxes and characterized. The effects of different waxes, such as carnauba wax, ozokerite wax, laurel wax, beeswax, rice bran wax, candelilla wax and microcrystalline wax, in the concentration range of 1% to 5% (w/w) on the ointment texture, consistency and stability were evaluated. The results showed significant variations in texture, sensory and rheological profiles. This was attributed to the wax’s nature and chain composition. Microcrystalline wax gave the best results but laurel wax, beeswax and rice bran wax exhibited excellent texturing, similar sensory profiles and well-balanced rheological properties. PMID:27258290

  2. Topical Formulation Comprising Fatty Acid Extract from Cod Liver Oil: Development, Evaluation and Stability Studies

    Directory of Open Access Journals (Sweden)

    Biljana Ilievska

    2016-06-01

    Full Text Available The purpose of this study was to develop a pharmaceutical formulation containing fatty acid extract rich in free omega-3 fatty acids such as eicosapentaenoic acid and docosahexaenoic acid for topical use. Although the health benefits of cod liver oil and other fish oils taken orally as a dietary supplement have been acknowledged and exploited, it is clear that their use can be extended further to cover their antibacterial properties. In vitro evaluation showed that 20% (v/v fatty acid extract exhibits good activity against strains of the Gram-positive bacteria Staphylococcus aureus, Enterococcus faecalis, Streptoccoccus pyogenes and Streptoccoccus pneumonia. Therefore, free polyunsaturated fatty acids from cod liver oil or other fish oils can be used as safe and natural antibacterial agents. In this study, ointment compositions containing free fatty acids as active antibacterial agents were prepared by using various natural waxes and characterized. The effects of different waxes, such as carnauba wax, ozokerite wax, laurel wax, beeswax, rice bran wax, candelilla wax and microcrystalline wax, in the concentration range of 1% to 5% (w/w on the ointment texture, consistency and stability were evaluated. The results showed significant variations in texture, sensory and rheological profiles. This was attributed to the wax’s nature and chain composition. Microcrystalline wax gave the best results but laurel wax, beeswax and rice bran wax exhibited excellent texturing, similar sensory profiles and well-balanced rheological properties.

  3. Mathematical modeling of copper(II) ion inhibition on COD removal in an activated sludge unit.

    Science.gov (United States)

    Pamukoglu, M Yunus; Kargi, Fikret

    2007-07-19

    A mathematical model was developed to describe the Cu(II) ion inhibition on chemical oxygen demand (COD) removal from synthetic wastewater containing 15 mg l(-1) Cu(II) in an activated sludge unit. Experimental data obtained at different sludge ages (5-30 days) and hydraulic residence times (HRT) (5-25 h) were used to determine the kinetic, stoichiometric and inhibition constants for the COD removal rate in the presence and absence of Cu(II) ions. The inhibition pattern was identified as non-competitive, since Cu(II) ion inhibitions were observed both on maximum specific substrate removal rate (k) and on the saturation constant (Ks) with the inhibition constants of 97 and 18 mg l(-1), respectively, indicating more pronounced inhibition on Ks. The growth yield coefficient (Y) decreased and the death rate constant (b) increased in the presence of Cu(II) ions due to copper ion toxicity on microbial growth with inhibition constants of 29 and 200 mg l(-1), respectively indicating more effective inhibition on the growth yield coefficient or higher maintenance requirements. The mathematical model with the predetermined kinetic constants was able to predict the system performance reasonably well especially at high HRT operations.

  4. Atlantic hurricane response to geoengineering

    Science.gov (United States)

    Moore, John; Grinsted, Aslak; Ji, Duoying; Yu, Xiaoyong; Guo, Xiaoran

    2015-04-01

    Devastating Atlantic hurricanes are relatively rare events. However their intensity and frequency in a warming world may rapidly increase - perhaps by a factor of 5 for a 2°C mean global warming. Geoengineering by sulphate aerosol injection preferentially cools the tropics relative to the polar regions, including the hurricane main development region in the Atlantic, suggesting that geoengineering may be an effective method of controlling hurricanes. We examine this hypothesis using 6 Earth System Model simulations of climate under the GeoMIP G3 and G4 schemes that use aerosols to reduce the radiative forcing under the RCP4.5 scenario. We find that although temperatures are ameliorated by geoengineering, the numbers of storm surge events as big as that caused the 2005 Katrina hurricane are only slightly reduced compared with no geoengineering. As higher levels of sulphate aerosol injection produce diminishing returns in terms of cooling, but cause undesirable effects in various regions, it seems that stratospheric aerosol geoengineering is not an effective method of controlling hurricane damage.

  5. Determining COD Load of Cattle Dung and Calculating COD Formation Coefficient and Total COD Amount Engendered from Cattle Dung in China%牛粪COD负荷、产污系数及原始产污总量的测算

    Institute of Scientific and Technical Information of China (English)

    张蓓; 李汉平; 张春光

    2011-01-01

    为得到牛粪COD产污系数及原始产污总量,先采用非水样品COD负荷测定方法,对单位绝干牛粪COD负荷值进行了实验测定:牛粪(含溶解态和非溶解态的全成分样)的COD负荷实测值为1.337 kg·kg-1(绝干牛粪).由排粪系数得到牛粪的COD产污系数典型值为5.35kg·d-1·头-1.根据养牛数,计算得到我国2008年牛粪的COD原始产污总量高达2.06亿t,相当于当年全国工业和生活COD排放总量的15.6倍.需要对牛粪的GOD原始产污总量与可能形成的水环境面源贡献压力及其防范予以充分重视.%Based on the established COD (Chemical Oxygen Demand) determination method to non-aqueous samples such as crop straws, several COD load experiments on cattle dung were carried out, in which the samples of cattle dung were firstly dissolved in the solution of 75 % sulphuric acid before using the COD determination method to waste water samples. The results showed that the determination method of COD load on cattle dung was feasible in practice, and were both exact and reliable. According to the experiment, the average COD load was 1.337 kg · kg-1 ( oven dry cattle dung). The COD formation coefficient from cattle dung was 5.35 kg · d-1 · cattle -1. With the statistical data on cattle, total COD amount directly engendered from cattle dung in China was about 206 million tons in 2008, which was 15.6 times to the total COD amount discharged from all industries and urban population in 2008, China. And the COD amount formed from cattle dung in the form of non-point sources had a positive linear relationship with the lost rate of total cattle dung amount emitted into the receiving waters. Therefore, more attentions should be paid on preventing and managing water environmental issues due to the cattle dung in China.

  6. Freshness assessment of thawed and chilled cod fillets packed in modified atmosphere using near-infrared spectroscopy

    DEFF Research Database (Denmark)

    Bøknæs, Niels; Jensen, K.N.; Andersen, Charlotte Møller;

    2002-01-01

    Near-infrared reflectance (NIR) spectra was recorded of 105 samples of cod mince prepared from chill stored thawed cod fillets of varying quality in modified atmosphere packaging (MAP). Traditional chemical, physical, microbiological and sensory quality methods developed for assessing fresh fish...... of selected quality attributes as drip loss, water holding capacity and content of dimethylamine by NIR was evaluated. The results of the investigation were presented using multivariate modelling methods such as partial least- squares regression (PLSR) and discriminant partial least- squares regression (DPLSR......). Systematic differences in the NIR measurements on minced cod fillets were primarily due to the chill storage duration (days at 2 degreesC) on thawed-chilled MAP fillets. PLSR models based on wavelengths selected by a new Jack-knife method resulted in a correlation coefficient of 0.90 between measured...

  7. Multi-decadal responses of a cod (Gadus morhua) population to human-induced trophic changes, fishing, and climate

    DEFF Research Database (Denmark)

    Eero, Margit; MacKenzie, Brian; Köster, Fritz

    2011-01-01

    Understanding how human impacts have interacted with natural variability to affect populations and ecosystems is required for sustainable management and conservation. The Baltic Sea is one of the few large marine ecosystems worldwide where the relative contribution of several key forcings...... to changes in fish populations can be analyzed with empirical data. In this study we investigate how climate variability and multiple human impacts (fishing, marine mammal hunting, eutrophication) have affected multi-decadal scale dynamics of cod in the Baltic Sea during the 20th century.We document......-average cod productivity coupled to a temporary reduction in fishing pressure. The Baltic cod example demonstrates how combinations of different forcings can have synergistic effects and consequently dramatic impacts on population dynamics. Our results highlight the potential and limitations of human...

  8. Development of international fisheries for the eastern Baltic cod ( Gadus morhua ) from the late 1880s until 1938

    DEFF Research Database (Denmark)

    Eero, Margit; MacKenzie, Brian; Karlsdottir, H.M.;

    2007-01-01

    The paper provides an overview of eastern Baltic cod (Gadus morhua) fisheries from the end of the 1880s until 1938, in order to improve the knowledge of long-term stock dynamics. The data compiled and included in the study comprise catches and economic values of exploited fish species, time series...... of indicators of fishing effort and qualitative information on developments in fishing technology. This information has been assembled for different countries and locations in the Baltic Sea. We first summarize the multi-decadal development of national cod fisheries and their relative importance during...... of the variations in the catches of different countries (e.g. decline in the late 1920s; increase in the late 1930s) were caused by factors other than fishery developments. These factors probably include ecosystem-induced variations in cod population dynamics and need further investigation. (c) 2007 Elsevier B...

  9. Connectivity of larval cod in the transition area between North Sea and Baltic Sea and potential implications for fisheries management

    DEFF Research Database (Denmark)

    Huwer, Bastian; Hinrichsen, H.-H.; Hüssy, Karin

    2016-01-01

    distributions of juvenile cod. The transport of particles showed considerable intra- and interannual variability, but also some general patterns of retention within and dispersion todifferentmanagement areas.Good spatial overlapof particle end positions, representing potential juvenile settlement areas......,with observed distributions of juveniles in bottomtrawl surveys suggests that the drift simulations provide reasonable estimates of early life stage connectivity between cod populations in the investigated areas. High exchange rates of particles betweenmanagement areas of up to ca. 70%suggest that cod...... in the transition area betweenNorth Sea and Balticwere investigated to (i) determine long-termtrends and variability in advective transport of larvae fromspawning grounds to juvenilenursery areas, (ii) estimate thedegreeof exchangebetweendifferentmanagement areas, and(iii)compare the resultswithspatial...

  10. Larval and small juvenile cod Gadus morhua concentrated in the highly productive areas of a shelf break front

    DEFF Research Database (Denmark)

    Munk, Peter; Larsson, P.O.; Danielsen, D.

    1995-01-01

    describe the identified nursery areas of larvae/juveniles and analyse the connection between the distribution of cod and hydrographical (frontal) characteristics of the areas. A total area of 67000 km(2) was covered by stations in a 10 x 10 nautical mile grid. Salinity, temperature, NO3+NO2 and chlorophyll...... part of the investigation area, and within the zone of the front we observed enhanced primary production and abundance of both phyto- and zooplankton. The distribution of larval and juvenile cod was also related to the hydrography, the abundance of cod peaked within a restricted zone...... concentration were profiled through the water column. Zooplankton were sampled by a submersible pump and abundance of fish larvae/juveniles were estimated by depth- integrating tows of a 2 m ring net. The hydrographical measurements indicated a shelf break front positioned along the shelf slope in the southern...

  11. Theoretical study of the influence of twine thickness on haddock selectivity in diamond mesh cod-ends

    DEFF Research Database (Denmark)

    Herrmann, Bent; O'Neill, F.G.

    2006-01-01

    Using the cod-end simulation model PRESEMO, the influence of twine thickness on cod-end selectivity is investigated. The reduction of lateral mesh opening that arises as a result of both twine bending stiffness and the physical presence of the twine is considered. While it is shown that this leads...... to a reduction in cod-end selectivity with an increase of twine thickness, it does not fully explain the relationship found in the available experimental data.The effect twine thickness may have on the ability of a fish to deform a mesh during the early part of a haul and how netting made of thicker twine may...... discourage a fish from making escape attempts is investigated. The influence that these factors may have is examined and when included in PRESEMO the resulting simulations are a much better representation of the experimental data....

  12. Converting Chemical Oxygen Demand (COD) of Cellulosic Ethanol Fermentation Wastewater into Microbial Lipid by Oleaginous Yeast Trichosporon cutaneum.

    Science.gov (United States)

    Wang, Juan; Hu, Mingshan; Zhang, Huizhan; Bao, Jie

    2017-01-27

    Cellulosic ethanol fermentation wastewater is the stillage stream of distillation column of cellulosic ethanol fermentation broth with high chemical oxygen demand (COD). The COD is required to reduce before the wastewater is released or recycled. Without any pretreatment nor external nutrients, the cellulosic ethanol fermentation wastewater bioconversion by Trichosporon cutaneum ACCC 20271 was carried out for the first time. The major components of the wastewater including glucose, xylose, acetic acid, ethanol, and partial of phenolic compounds could be utilized by T. cutaneum ACCC 20271. In a 3-L bioreactor, 2.16 g/L of microbial lipid accumulated with 55.05% of COD reduced after a 5-day culture of T. cutaneum ACCC 20271 in the wastewater. The fatty acid composition of the derived microbial lipid was similar with vegetable oil, in which it could be used as biodiesel production feedstock. This study will both solve the environmental problem and offer low-cost lipid feedstock for biodiesel production.

  13. Five Coordinate Platinum(II in [Pt(bpy(cod(Me][SbF6]: A Structural and Spectroscopic Study

    Directory of Open Access Journals (Sweden)

    Axel Klein

    2015-05-01

    Full Text Available The five coordinate organoplatinum complex [Pt(bpy(cod(Me][SbF6] (cod = 1,5-cyclooctadiene, bpy = 2,2’-bipyridine was obtained reacting [Pt(cod(MeCl] with Ag[SbF6] and bpy and characterized by multiple spectroscopy (IR and NMR and single crystal XRD. Although the application of the τ values for the discrimination between trigonal bipyramidal vs. square pyramidal coordination fails, the molecular structure can be unequivocally described as basally-distorted trigonal bipyramidal. Detailed multinuclear NMR spectroscopy in solution at ambient temperature gives strong evidence for the same structure; corresponding low-temperature measurements down to −70 °C revealed no marked dynamic processes.

  14. Dual annual spawning races in Atlantic sturgeon.

    Directory of Open Access Journals (Sweden)

    Matthew T Balazik

    Full Text Available Atlantic sturgeon (Acipenser oxyrinchus oxyrinchus, Acipenseridae populations in the United States were listed as either endangered or threatened under the Endangered Species Act in 2012. Because of the endangered/threatened status, a better understanding of Atlantic sturgeon life-history behavior and habitat use is important for effective management. It has been widely documented that Atlantic sturgeon reproduction occurs from late winter to early summer, varying clinally with latitude. However, recent data show Atlantic sturgeon also spawn later in the year. The group that spawns later in the year seems to be completely separate from the spring spawning run. Recognition of the later spawning season has drastically modified estimates of the population status of Atlantic sturgeon in Virginia. With the combination of new telemetry data and historical documentation we describe a dual spawning strategy that likely occurs in various degrees along most, if not all, of the Atlantic sturgeon's range. Using new data combined with historical sources, a new spawning strategy emerges which managers and researchers should note when determining the status of Atlantic sturgeon populations and implementing conservation measures.

  15. 75 FR 27219 - Fisheries of the Northeastern United States; Atlantic Deep-Sea Red Crab Fisheries; 2010 Atlantic...

    Science.gov (United States)

    2010-05-14

    ... United States; Atlantic Deep-Sea Red Crab Fisheries; 2010 Atlantic Deep-Sea Red Crab Specifications...), Commerce. ACTION: Final rule. SUMMARY: NMFS issues final specifications for the 2010 Atlantic deep- sea red..., the NMFS Assistant Administrator has determined that this rule is consistent with the Atlantic...

  16. 75 FR 49420 - Fisheries of the Northeastern United States; Atlantic Deep-Sea Red Crab Fisheries; 2010 Atlantic...

    Science.gov (United States)

    2010-08-13

    ... United States; Atlantic Deep-Sea Red Crab Fisheries; 2010 Atlantic Deep-Sea Red Crab Specifications In... (TAC) and corresponding fleet days-at-sea (DAS) allocation for the Atlantic deep- sea red crab fishery... the implementing regulations for the Atlantic Deep- Sea Red Crab Fishery Management Plan...

  17. 75 FR 7435 - Fisheries of the Northeastern United States; Atlantic Deep-Sea Red Crab Fisheries; 2010 Atlantic...

    Science.gov (United States)

    2010-02-19

    ... United States; Atlantic Deep-Sea Red Crab Fisheries; 2010 Atlantic Deep-Sea Red Crab Specifications... Atlantic deep-sea red crab fishery, including a target total allowable catch (TAC) and a fleet-wide days-at-sea (DAS) allocation. The implementing regulations for the Atlantic Deep-Sea Red Crab...

  18. 75 FR 35435 - Fisheries of the Northeastern United States; Atlantic Deep-Sea Red Crab Fisheries; 2010 Atlantic...

    Science.gov (United States)

    2010-06-22

    ... United States; Atlantic Deep-Sea Red Crab Fisheries; 2010 Atlantic Deep-Sea Red Crab Specifications In... finalized 2010 specifications for the Atlantic deep-sea red crab fishery, including a target total allowable... Atlantic Deep-Sea Red Crab Fishery Management Plan (FMP) allow NMFS to make an in-season adjustment to...

  19. Lipid and Fatty Acid Compositions of Cod(Gadus morhua),Haddock(Melanogrammus aeglefinus)and Halibut(Hippogiossus hippoglossus)

    Institute of Scientific and Technical Information of China (English)

    ZENG Duan; MAI Kangsen; AI Qinghui; Joyce E.Milley; Santosh P.Lall

    2010-01-01

    This study was conducted to compare lipid and fatty acid composition of cod,haddock and halibut.Three groups of cod(276 g±61 g),haddock(538 g±83 g)and halibut(3704 g±221 g)were maintained with commercial feeds mainly based on fish meal and marine fish oil for 12 weeks prior to sampling.The fatty acid compositions of muscle and liver were determined by GC/FID after derivatization of extracted lipids into fatty acid methyl esters(FAME).Lipids were also fractionated into neutral and polar lipids using Waters silica Sep-Pak(R).The phospholipid fraction was further separated by high-performance thin-layer chromatography(HPTLC)and the FAME profile was obtained.Results of the present study showed that cod and haddock were lean fish and their total muscle lipid contents were 0.8% and 0.7%,respectively,with phospholipid constituting 83.6% and 87.5% of the total muscle lipid,respectively.Halibut was a medium-fat fish and its muscle lipid content was 8%,with 84% of the total muscle lipid being neutral lipid.Total liver lipid contents of cod,haddock and halibut were 36.9%,67.2% and 30.7%,respectively,of which the neutral lipids accounted for the major fraction(88.1%-97.1%).Polyunsaturated fatty acids were the most abundant in cod and haddock muscle neutral lipid.Monounsaturated fatty acid level was the highest in halibut muscle neutral lipid.Fatty acid compositions of phospholipid were relatively constant.In summary,the liver of cod and haddock as lean fish was the main lipid reserve organ,and structural phospholipid is the major lipid form in flesh.However,as a medium-fat fish,halibut stored lipid in both their liver and muscle.

  20. Comparison of COD removal from pharmaceutical wastewater by electrocoagulation, photoelectrocoagulation, peroxi-electrocoagulation and peroxi-photoelectrocoagulation processes

    Energy Technology Data Exchange (ETDEWEB)

    Farhadi, Sajjad, E-mail: sajjadfarhadi@ut.ac.ir [Department of Civil and Environmental Engineering, Graduate Faculty of Environment, University of Tehran (Iran, Islamic Republic of); Aminzadeh, Behnoush, E-mail: bamin@ut.ac.ir [Department of Civil and Environmental Engineering, Graduate Faculty of Environment, University of Tehran (Iran, Islamic Republic of); Torabian, Ali, E-mail: atorabi@ut.ac.ir [Department of Civil and Environmental Engineering, Graduate Faculty of Environment, University of Tehran (Iran, Islamic Republic of); Khatibikamal, Vahid, E-mail: vahidkhatibi@ut.ac.ir [Department of Civil and Environmental Engineering, Graduate Faculty of Environment, University of Tehran (Iran, Islamic Republic of); Alizadeh Fard, Mohammad, E-mail: malizadeh1987@ut.ac.ir [Department of Civil and Environmental Engineering, Graduate Faculty of Environment, University of Tehran (Iran, Islamic Republic of)

    2012-06-15

    Highlights: Black-Right-Pointing-Pointer Hydrogen peroxide improves the performance of electrocoagulation process. Black-Right-Pointing-Pointer UV light can be effective on the performance on peroxi-electrocoagulation and electrocoagulation processes. Black-Right-Pointing-Pointer The optimal amount of hydrogen peroxide for peroxi-electrocoagulation process for COD removal from pharmaceutical wastewater is 300 mg/L. Black-Right-Pointing-Pointer The optimal values of pH for electrocoagulation and peroxi-electrocoagulation are 7 and 3, respectively. - Abstract: This work makes a comparison between electrocoagulation (EC), photoelectrocoagulation, peroxi-electrocoagulation and peroxi-photoelectrocoagulation processes to investigate the removal of chemical oxygen demand (COD) from pharmaceutical wastewater. The effects of operational parameters such as initial pH, current density, applied voltage, amount of hydrogen peroxide and electrolysis time on COD removal efficiency were investigated and the optimum operating range for each of these operating variables was experimentally determined. In electrocoagulation process, the optimum values of pH and voltage were determined to be 7 and 40 V, respectively. Desired pH and hydrogen peroxide concentration in the Fenton-based processes were found to be 3 and 300 mg/L, respectively. The amounts of COD, pH, electrical conductivity, temperature and total dissolved solids (TDS) were on-line monitored. Results indicated that under the optimum operating range for each process, the COD removal efficiency was in order of peroxi-electrocoagulation > peroxi-photoelectrocoagulation > photoelectrocoagulation > electrocoagulation. Finally, a kinetic study was carried out using the linear pseudo-second-order model and results showed that the pseudo-second-order equation provided the best correlation for the COD removal rate.

  1. Evaluation of feed COD/sulfate ratio as a control criterion for the biological hydrogen sulfide production and lead precipitation

    Energy Technology Data Exchange (ETDEWEB)

    Velasco, Antonio [Direccion General del Centro Nacional de Investigacion y Capacitacion Ambiental-Instituto Nacional de Ecologia, Av. San Rafael Atlixco 186, Col. Vicentina. Iztapalapa, Mexico 09340, D.F. (Mexico)], E-mail: jvelasco@ine.gob.mx; Ramirez, Martha [Direccion General del Centro Nacional de Investigacion y Capacitacion Ambiental-Instituto Nacional de Ecologia, Av. San Rafael Atlixco 186, Col. Vicentina. Iztapalapa, Mexico 09340, D.F. (Mexico); Volke-Sepulveda, Tania [Departamento de Biotecnologia, UAM-Cuajimalpa, San Rafael Atlixco 186, Col. Vicentina. Iztapalapa, Mexico 09340, D.F. (Mexico); Gonzalez-Sanchez, Armando [Departamento de Ingenieria de Procesos, Universidad Autonoma Metropolitana-Iztapalapa, UAM-Cuajimalpa, San Rafael Atlixco 186, Col. Vicentina. Iztapalapa, Mexico 09340, D.F. (Mexico); Revah, Sergio [Departamento de Procesos y Tecnologia, UAM-Cuajimalpa, San Rafael Atlixco 186, Col. Vicentina. Iztapalapa, Mexico 09340, D.F. (Mexico)

    2008-03-01

    The ability of sulfate-reducing bacteria to produce hydrogen sulfide and the high affinity of sulfide to react with divalent metallic cations represent an excellent option to remove heavy metals from wastewater. Different parameters have been proposed to control the hydrogen sulfide production by anaerobic bacteria, such as the organic and sulfate loading rates and the feed COD/SO{sub 4}{sup 2-} ratio. This work relates the feed COD/SO{sub 4}{sup 2-} ratio with the hydrogen sulfide production and dissolved lead precipitation, using ethanol as carbon and energy source in an up-flow anaerobic sludge blanket reactor. A maximum dissolved sulfide concentration of 470 {+-} 7 mg S/L was obtained at a feed COD/SO{sub 4}{sup 2-} ratio of 2.5, with sulfate and ethanol conversions of approximately 94 and 87%, respectively. The lowest dissolved sulfide concentration (145 {+-} 10 mg S/L) was observed with a feed COD/SO{sub 4}{sup 2-} ratio of 0.67. Substantial amounts of acetate (510-1730 mg/L) were produced and accumulated in the bioreactor from ethanol oxidation. Although only incomplete oxidation of ethanol to acetate was observed, the consortium was able to remove 99% of the dissolved lead (200 mg/L) with a feed COD/SO{sub 4}{sup 2-} ratio of 1.5. It was found that the feed COD/SO{sub 4}{sup 2-} ratio could be an adequate parameter to control the hydrogen sulfide production and the consequent precipitation of dissolved lead.

  2. An Atlantic influence on Amazon rainfall

    Energy Technology Data Exchange (ETDEWEB)

    Yoon, Jin-Ho [University of Maryland, Department of Atmospheric and Oceanic Science, College Park, MD (United States); Zeng, Ning [University of Maryland, Earth System Science Interdisciplinary Center, College Park, MD (United States); University of Maryland, Department of Atmospheric and Oceanic Science, College Park, MD (United States)

    2010-02-15

    Rainfall variability over the Amazon basin has often been linked to variations in Pacific sea surface temperature (SST), and in particular, to the El Nino/Southern Oscillation (ENSO). However, only a fraction of Amazon rainfall variability can be explained by ENSO. Building upon the recent work of Zeng (Environ Res Lett 3:014002, 2008), here we provide further evidence for an influence on Amazon rainfall from the tropical Atlantic Ocean. The strength of the North Atlantic influence is found to be comparable to the better-known Pacific ENSO connection. The tropical South Atlantic Ocean also shows some influence during the wet-to-dry season transition period. The Atlantic influence is through changes in the north-south divergent circulation and the movement of the ITCZ following warm SST. Therefore, it is strongest in the southern part of the Amazon basin during the Amazon's dry season (July-October). In contrast, the ENSO related teleconnection is through anomalous east-west Walker circulation with largely concentrated in the eastern (lower) Amazon. This ENSO connection is seasonally locked to boreal winter. A complication due to the influence of ENSO on Atlantic SST causes an apparent North Atlantic SST lag of Amazon rainfall. Removing ENSO from North Atlantic SST via linear regression resolves this causality problem in that the residual Atlantic variability correlates well and is in phase with the Amazon rainfall. A strong Atlantic influence during boreal summer and autumn is particularly significant in terms of the impact on the hydro-ecosystem which is most vulnerable during the dry season, as highlighted by the severe 2005 Amazon drought. Such findings have implications for both seasonal-interannual climate prediction and understanding the longer-term changes of the Amazon rainforest. (orig.)

  3. Life history tactics of Atlantic salmon in Newfoundland

    OpenAIRE

    Gibson, John; Haedrich, Richard

    2006-01-01

    Popular articles about the Atlantic salmon (Salmo salar) usually state that ‘the Atlantic salmon is an anadromous species’, e.g. publications by the Atlantic Salmon Federation (North America), Atlantic Salmon Trust (UK), and WWF (World Wildlife Fund), and the life history is depicted as migration of juveniles from fresh water to the marine environment, with a return to where the fish were born as spawning adults. This article reviews the life history tactics of Atlantic salmon in Newfoundland...

  4. Cloning and functional verification of codY promoter from Streptococcus thermophilus%嗜热链球菌codY基因启动子的克隆及功能验证

    Institute of Scientific and Technical Information of China (English)

    刘芳; 都立辉; 王道营; 徐为民; 霍贵成

    2013-01-01

    The experiment aimed to study the function of codY gene promoter. The promoter was amplified from Streptococcus thermophilus KLDS 3.0503 genome and inserted into the promoter probe vector pNZ273 to construct a recom-binant plasmid named pNZ273/codY. The plasmid p3. 8501-1 in KLDS3. 8501 was sequenced and its genetic information was analyzed. The replicated fragment of plasmid p3. 8501-1 was ligated together with the fragments including chloramphen-icol-resistance gene, codY gene promoter and gusA gene in plasmid pNZ273/codY.The ligated product was electrotrans-formed into KLDS3.0503 to construct a recombinant plasmid named pSTl. It was found that both in Lactococcus lactis and Streptococcus thermophilus, the codY gene promoter could switch on the gusA gene expression, and p-glucuronidase activity could be detected only when the strains grew to the logarithmic growth phase. These results indicated that the codY gene promoter could functioned as an inducible promoter because of its self-regulation mechanism.%为研究转录调控蛋白codY基因启动子的功能,首先从嗜热链球菌KLDS3.0503中克隆出codY基因启动子,将该启动子连入启动子探针型载体pNZ273的gusA基因上游,获得重组质粒pNZ273/codY.通过分析嗜热链球菌KLDS3.8501携带的质粒p3.8501-1的全序列后,将p3.8501-1质粒的复制区段与pNZ273/codY质粒中氯霉素抗性基因、codY基因启动子和gusA基因的片断连接到一起,电转化入嗜热链球菌KLDS3.0503中,获得重组质粒pST1.在乳酸乳球菌和嗜热链球菌中,该启动子均能启动下游gusA基因的表达,并且当菌株生长到对数生长期时,才检测到β-葡糖苷酸酶的活性.这说明codY启动子凭借自身的调控机制可以起到诱导型启动子的作用,并能控制外源基因的表达.

  5. 自配消解液分光光度法测定污水中的COD%Determination of COD by spectrophotometry with self-prepared digestion solution

    Institute of Scientific and Technical Information of China (English)

    周俊; 杨新萍; 周立祥

    2009-01-01

    以自配消解液代替ThermoFisher公司AQ4001COD测定系统的专用消解液,比较了自配消解液分光光度法与国家标准重铬酸钾法(GB 11914-1989)测定化学需氧量(COD)的差异.对比试验表明,自配消解液分光光度法测定COD的结果精确度和准确度高,与国家标准方法无显著性差异.自配消解液分光光度法测定水样COD值的相对标准偏差;低量程(30~150 mg/L)为1.38%~2.53%,中量程(0~1 500 mg/L)为0.47%~3.63%,高量程(2 000~15 000 mg/L)为0.17%~3.53%,在国家标准方法测试水样COD值的允许误差范围内.除制革废水外,自配消解液可以代替AQ4001COD测定系统的专用消解液,适用不同量程范围内污水COD的测定.自配消解液分光光度法具有试剂使用量少、速度快、经济、二次污染小等优点,值得在环境科学领域及废水水质监测中推广应用.%Determination of COD by spectrophotometry is performed by replacing the high-cost special digestion reagent of ThermoFisher's AQ4001COD system with the self-prepared digestion solution in the present study. The results showed that COD determination by spectrophotometry with self-prepared digestion solution exhibits a higher precision and accuracy. Furthermore, no significant differences for COD determination value are found between China national standard method (GB 11914-1989) and the above-mentioned spectrophotometry with self-prepared digestion solution . The standard deviation of COD determination values by spectrophotometry with self-prepared digestion solution varies from 1. 38% to 2. 53% for water sample with a lower COD concentration from 30 to 150 mg/L ,from 0. 47% to 3. 63% for water sample with a middle COD concentration ranged from 0 to 1 500 mg/L, and from 0. 17% to 3. 53% for water sample with a higher COD concentration of more than 3 000 mg/L. It is concluded that COD determination by spectrophotometry with self-prepared digestion solution is suitable to determine COD

  6. The removal of COD and color by Fenton oxidation from leachate of Erzurum municipal solid waste landfill

    Science.gov (United States)

    Kocakaplan, Nihal; Ertugay, Neşe; Malkoç, Emine

    2016-04-01

    The optimal conditions for treatment of leachate were determined as pH = 2.5, Fe2+= 2 mg/L and H2O2= 100 mg/L. Under the optimal conditions, approximately 90% color (at 620 nm), 84% color (at 525 nm), 74% color (at 436 nm) and 47.8% COD removal efficiency from leachate were achieved after 20 min of reaction. Depending on the results obtained experiments, Fenton process has been used successfully in removal of COD and color in landfill leachate.

  7. The impact of gear regulation changes on discard rates: the case of the Baltic Sea cod fishery

    DEFF Research Database (Denmark)

    Feekings, Jordan P.; Madsen, Niels; Lewy, Peter

    2012-01-01

    stocks have decline considerably over the past 30 years which has subsequently led to numerous legislations and policies being introduced to improving the state of the stocks. We evaluate whether the developments made to trawls used in the Baltic Sea cod fishery to improve selectivity and the increase...... in minimum landing size (MLS) have had any marked effect on the discard rates of the target species, cod. Results show that the gear regulation changes enforced in the Baltic demersal trawl fishery have had diverse effects on discard rates and are largely dependent on the gear, recruitment, and compliance...

  8. A nuclear DNA basis for shelf- and bank scale population structure in northwest Atlantic cod ( Gadus morhua ) : Labrador to Georges Bank

    DEFF Research Database (Denmark)

    Ruzzante, D.E.; Taggart, C.T.; Cook, D.

    1998-01-01

    -ST measures of population structure, differences are revealed among populations at continental shelf scales (NE Newfoundland Shelf, Grand Banks, Flemish Cap, Scotian Shelf, Georges Bank) where regions are separated by submarine saddles, channels and trenches. However, we also provide evidence of genetic...... by the associated oceanographic features and processes that conceivably form the template for the evolution of the structure. We suggest that bathymetric and hydrodynamic structure represents a rational starting point for developing hypotheses to examine the processes that lead to the genetic structuring of marine...

  9. Abolition of reflex bradycardia by cardiac vagotomy has no effect on the regulation of oxygen uptake by Atlantic cod in progressive hypoxia

    DEFF Research Database (Denmark)

    McKenzie, David; Skov, Peter Vilhelm; Taylor, E.W.T.

    2009-01-01

    nerve X Cardiac denervation had no effect on oxygen uptake rate (M-O2), gill ventilation rate (f(G)) or opercular pressure amplitude (P-OP) under normoxic conditions, but caused a significant increase in heart rate (f(H)), to 50 +/- 1 beats min(-1) by comparison to 40 +/- 2 beats min(-1) in sham...

  10. Atlantic Sharpnose Shark Reproductive Biology Data

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Reproductive data from Atlantic sharpnose sharks were collected from specimens captured throughout the northern Gulf of Mexico on various research vessels. Data...

  11. Atlantic NAD 83 SLA Baseline Tangents

    Data.gov (United States)

    Bureau of Ocean Energy Management, Department of the Interior — This data set contains baseline tangent lines in ArcGIS shapefile format for the BOEM Atlantic Region. Baseline tangent lines are typically bay or river closing...

  12. Northwest Atlantic Regional Climatology (NCEI Accession 0155889)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — To provide an improved oceanographic foundation and reference for multi-disciplinary studies of the Northwest Atlantic Ocean, NCEI Regional Climatology Team...

  13. Atlantic energy and the strategic outlook

    Directory of Open Access Journals (Sweden)

    Paul Isbell

    2013-09-01

    Full Text Available Sweeping changes are beginning to transform energy scenarios around the world. The gas revolution, a renaissance in petroleum technology and exploration, and a chaotic but powerful movement toward the goal of low-carbon economies are three of the principal energy trends currently interacting with structural changes in the geo-economics of the Atlantic world to present new perspectives and opportunitiesfor the diverse actors in the ‘Atlantic Basin’. This article explores how changes in the energy landscape are contributing to a reassessment of the strategic horizon. The potential impacts of the shale revolution, deep-offshore oil, biofuels and other modern renewable energies on the geopolitics of the Atlantic Basin will be assessed, and the hypothesis that an Atlantic Basin energy system is now taking shape will be evaluated, along with an analysis of anticipated impacts.

  14. Atlantic NAD 83 SLA Baseline Points

    Data.gov (United States)

    Bureau of Ocean Energy Management, Department of the Interior — This data set contains baseline points in ArcGIS shapefile format for the BOEM Atlantic Region. Baseline points are the discrete coordinate points along the...

  15. Decadal cyclone variability in the North Atlantic

    Energy Technology Data Exchange (ETDEWEB)

    Luksch, U.; Blender, R.; Fraedrich, K. [Meteorological Inst., Univ. of Hamburg (Germany); Raible, C.C. [Climate and Environmental Physics, Physics Inst., Univ. of Bern (Switzerland)

    2005-12-01

    The unstable midlatitude ocean-atmosphere coupling motivates the definition of two decadal regimes with distinct implications for the North Atlantic cyclone variability. Phases with low (high) decadal variability of the North Atlantic Oscillation, which are connected with an annular (sectoral) spatial scale of the geopotential height teleconnection pattern, are identified as a hemispheric (regional) regime. In the hemispheric regime during a positive El Nino/Southern Oscillation (ENSO) index (warm event), the North Atlantic cyclones and the regions of enhanced precipitation shift southward while over northern Europe the cyclone activity and the rainfall are reduced. During the regional regime this impact of ENSO on the Atlantic storm track is extremely small and a clear interpretation over Europe is inhibited. (orig.)

  16. Atlantic Marine Mammal Assessment Vessel Surveys

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — These data sets are a compilation of large vessel surveys for marine mammal stock assessments in South Atlantic (Florida to Maryland) waters from 1994 to the...

  17. Atlantic NAD 83 Continental Shelf Boundary (CSB)

    Data.gov (United States)

    Bureau of Ocean Energy Management, Department of the Interior — This data set contains Continental Shelf Boundary (CSB) lines in ESRI shapefile format for the BOEM Atlantic Region. The CSB defines the seaward limit of federally...

  18. Atlantic Surfclam and Ocean Quahog Survey

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The standardized NEFSC Atlantic Surfclam and Ocean Quahog Survey has covered an area from Cape Hatteras to Georges Bank. The survey was conducted every two or three...

  19. Catalytic wet-oxidation of a mixed liquid waste: COD and AOX abatement.

    Science.gov (United States)

    Goi, D; de Leitenburg, C; Trovarelli, A; Dolcetti, G

    2004-12-01

    A series of catalytic wet oxidation (CWO) reactions, at temperatures of 430-500 K and in a batch bench-top pressure vessel were carried out utilizing a strong wastewater composed of landfill leachate and heavily organic halogen polluted industrial wastewater. A CeO2-SiO2 mixed oxide catalyst with large surface area to assure optimal oxidation performance was prepared. The catalytic process was examined during batch reactions controlling Chemical Oxygen Demand (COD) and Adsorbable Organic Halogen (AOX) parameters, resulting AOX abatement to achieve better effect. Color and pH were also controlled during batch tests. A simple first order-two stage reaction behavior was supposed and verified with the considered parameters. Finally an OUR test was carried out to evaluate biodegradability changes of wastewater as a result of the catalytic reaction.

  20. Changes in cod muscle proteins during frozen storage revealed by proteome analysis and multivariate data analysis

    DEFF Research Database (Denmark)

    Kjærsgård, Inger Vibeke Holst; Nørrelykke, M.R.; Jessen, Flemming

    2006-01-01

    Multivariate data analysis has been combined with proteomics to enhance the recovery of information from 2-DE of cod muscle proteins during different storage conditions. Proteins were extracted according to 11 different storage conditions and samples were resolved by 2-DE. Data generated by 2-DE...... was subjected to principal component analysis (PCA) and discriminant partial least squares regression (DPLSR). Applying PCA to 2-DE data revealed the samples to form groups according to frozen storage time, whereas differences due to different storage temperatures or chilled storage in modified atmosphere...... packing did not lead to distinct changes in protein pattern. Applying DPLSR to the 2-DE data enabled the selection of protein spots critical for differentiation between 3 and 6months frozen storage with 12months frozen storage. Some of these protein spots have been identified by MS/MS, revealing myosin...

  1. On the relation between water pools and water holding capacity in cod muscle

    DEFF Research Database (Denmark)

    Andersen, Charlotte Møller; Jørgensen, Bo

    2004-01-01

    measures of water holding capacity (WHC) in a way that WHC related to the original water content could be predicted well for the whole and the minced muscle. The centrifuged samples gave optimal predictions of WHC related to the dry matter content, probably because the centrifuged samples are similar......Low-field 1H nuclear magnetic resonance (NMR) relaxations were measured on muscle, minced muscle and centrifuged mince from cod that had been treated under various frozen and chill storage conditions. By using multi-way chemometrics, uni-exponential profiles were obtained, from which the transverse...... relaxation times (T2-values) and the water pool sizes (m- values) were determined. Three pools of water were identified with the different relaxation times and m-values in the centrifuged samples reflecting the removal of loosely bound water. The m-values and the full NMR-signal decays were correlated to two...

  2. Application of critical COD and plastic instability concepts to fracture of shells. [Crack Opening Displacement

    Science.gov (United States)

    Erdogan, F.; Ratwani, M.

    1974-01-01

    The paper deals with the initiation, growth, and possible arrest of fracture in shell structures containing initial defects which may be approximated by an isolated part-through crack. The main study is restricted to the structures in which the net section of the shell wall around the defect zone is fully yielded. The problem is solved by using an 8th order shallow shell theory with a conventional plastic strip model to account for the plastic deformations. Using the critical COD or the plastic instability as fracture criterion, the results are applied to the fracture propagation and arrest in shells. The calculated results are then compared with those obtained from the experiments on zircaloy, aluminum, and steel pipes.

  3. COMPARISON OF THE FRACTIONS OF COD IN RAW WASTEWATER INFLUENT FOR SMALL AND LARGE SEWAGE TREATMENT

    Directory of Open Access Journals (Sweden)

    Joanna Smyk

    2016-06-01

    Full Text Available The article presents a comparison of the share fraction of COD in raw wastewater in treatment plants which flow in a small amount of wastewater and the sewage treatment with high flow. Compared the constructed wetlands with an average capacity of 4 dm3/m,, the treatment plant with biological deposits with an average capacity of 8 dm3/m, and a sewage treatment plant with activated sludge in Bialystok with a capacity of about 70 000 dm3/m. The lowest percentages of dissolved fraction of soluble organic non-biodegradable substances SI was reported in raw sewage in small sewage treatment plants. Based on the available data wasn’t found significant correlation between the factions XI, SS, XS in raw sewage and the amount of wastewater.

  4. Characteristic of COD removal and sludge settleability in biological treatment of hypersaline wastewater

    Institute of Scientific and Technical Information of China (English)

    ZHU Gui-bing; PENG Yong-zhen; MENG Xiang-sheng; CUI You-wei; SUN Ya-nan

    2006-01-01

    In order to investigate the feasibility of biological treatment of hypersaline wastewater produced from toilet flushing with seawater at low temperature, pilot-scale studies were established with plug-flow activated sludge process at low temperature (5-9℃) based on bench-scale experiments. The critical salinity concentration of 30 g/L, which resulted from the cooperation results of the non-halophilic bacteria and the halophilic bacteria, was drawn in bench-scale experiment. Pilot-scale studies showed that high COD removal efficiency, higher than 85 %, was obtained at low temperature when 30 percent seawater [ seawater/( seawater + sewage) ] was introduced. The salinity improved the settleability of activated sludge, and average SV dropped down from 38%to 22. 5% after adding seawater. Sludge bulking could be forborne effectively because filamentous bacteria couldn' t subsist under high salinity concentration.

  5. Environmental effects on recruitment and implications for biological reference points of Eastern Baltic cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Köster, Fritz; Vinther, Morten; MacKenzie, Brian;

    2009-01-01

    stock productivity. Long-term projections suggest that under adverse environmental conditions for reproduction, harvesting at fishing mortality determined as precautionary may not lead to a recovery of the stock to a biomass level considered precautionary. Thus, a revision of either the limit fishing......The decline of the Eastern Baltic cod (Gadus morhua) stock from highest to lowest stock levels on record throughout the 1980s and early 1990s was caused by a combination of recruitment failure and increasing fishing pressure at declining stock sizes. The processes driving the reproductive success...... of limit reference points, but according to long-term simulations also for target fishing mortalities, being central parts of harvest control rules in several management plans....

  6. Challenging ICES age estimation protocols: lessons learned from the eastern Baltic cod stock

    DEFF Research Database (Denmark)

    Hüssy, Karin; Radtke, Krzysztof; Plikshs, Maris;

    2016-01-01

    and within readers. Additionally, a wide range of alternative methods for deriving the age information necessary for stock assessment and for validation of the true age have been tested. However, these methods did not produce unbiased age estimates over the entire size and age range of the EBC stock. An age......Over the recent decades, the International Council for the Exploration of the Sea (ICES) has set guidelines for best practise quality control of age estimation procedures. The applicability of these guidelines is assessed by reviewing the ageing issues of eastern Baltic cod (EBC) as a case study....... Since the implementation of an age-based assessment of EBC in the beginning of the 1970s, the assessment has been hampered by the quality of the age composition data, in recent years to a degree that age-based assessment is no longer used. The reason for the age reading problems is the low visual...

  7. Modelling the beginning and end of a planktonic life stage — the distribution of cod eggs and settled juveniles in the North Sea

    DEFF Research Database (Denmark)

    Höffle, Hannes; Munk, Peter

    2012-01-01

    The North Sea cod stock is close to the southern limit of the species’ range. Therefore, it might be vulnerable to future climate change. Direct as well as indirect effects of climate forcing may have the greatest effects on early life stages. Here we present a study on the distribution of cod (G...

  8. Effect of COD/SO42- ratio and sulfide on thermophilic (55°C) sulfate reduction during the acidification of sucrose at pH 6

    NARCIS (Netherlands)

    Lopes, S.I.C.; Wang, X.; Capela, M.I.; Lens, P.N.L.

    2007-01-01

    This study investigated the effect of the COD/SO42¿ ratio (4 and 1) and the sulfide concentration on the performance of thermophilic (55 °C) acidifying (pH 6) upflow anaerobic sludge bed reactors fed with sucrose at an organic loading rate of 4.5 g COD lreactor¿1 day¿1. Sulfate reduction efficiencie

  9. Under-ice distribution of polar cod Boreogadus saida in the central Arctic Ocean and their association with sea-ice habitat properties

    NARCIS (Netherlands)

    David, Carmen; Lange, Benjamin; Krumpen, Thomas; Schaafsma, F.L.; Franeker, van J.A.; Flores, H.

    2016-01-01

    In the Arctic Ocean, sea-ice habitats are undergoing rapid environmental change. Polar cod (Boreogadus saida) is the most abundant fish known to reside under the pack-ice. The under-ice distribution, association with sea-ice habitat properties and origins of polar cod in the central Arctic Ocean, ho

  10. [Measurement of Water COD Based on UV-Vis Spectroscopy Technology].

    Science.gov (United States)

    Wang, Xiao-ming; Zhang, Hai-liang; Luo, Wei; Liu, Xue-mei

    2016-01-01

    Ultraviolet/visible (UV/Vis) spectroscopy technology was used to measure water COD. A total of 135 water samples were collected from Zhejiang province. Raw spectra with 3 different pretreatment methods (Multiplicative Scatter Correction (MSC), Standard Normal Variate (SNV) and 1st Derivatives were compared to determine the optimal pretreatment method for analysis. Spectral variable selection is an important strategy in spectrum modeling analysis, because it tends to parsimonious data representation and can lead to multivariate models with better performance. In order to simply calibration models, the preprocessed spectra were then used to select sensitive wavelengths by competitive adaptive reweighted sampling (CARS), Random frog and Successive Genetic Algorithm (GA) methods. Different numbers of sensitive wavelengths were selected by different variable selection methods with SNV preprocessing method. Partial least squares (PLS) was used to build models with the full spectra, and Extreme Learning Machine (ELM) was applied to build models with the selected wavelength variables. The overall results showed that ELM model performed better than PLS model, and the ELM model with the selected wavelengths based on CARS obtained the best results with the determination coefficient (R2), RMSEP and RPD were 0.82, 14.48 and 2.34 for prediction set. The results indicated that it was feasible to use UV/Vis with characteristic wavelengths which were obtained by CARS variable selection method, combined with ELM calibration could apply for the rapid and accurate determination of COD in aquaculture water. Moreover, this study laid the foundation for further implementation of online analysis of aquaculture water and rapid determination of other water quality parameters.

  11. Removal of turbidity, COD and BOD from secondarily treated sewage water by electrolytic treatment

    Science.gov (United States)

    Chopra, Ashok Kumar; Sharma, Arun Kumar

    2013-03-01

    A preliminary study was conducted for the removal of turbidity (TD), chemical oxygen demand (COD) and biochemical oxygen demand (BOD) from secondarily treated sewage (STS) water through the electrolytic batch mode experiments with DC power supply (12 V) up to 30 min and using a novel concept of electrode combinations of different metals. The different surface areas (40, 80, 120 and 160 cm2) of the electrodes as a function of cross-sectional area of the reactor and the effect of inter-electrode distances (2.5-10 cm) on the electrolysis of STS water were studied. This study revealed that the effluent can be effectively treated with the aluminum (Al) and iron (Fe) electrode combinations (Al-Fe and Fe-Al). The maximum removal of TD (81.51 %), COD (74.36 %) and BOD (70.86 %) was recorded with Al-Fe electrode system, while the removal of these parameters was found to be 71.11, 64.95 and 61.87 %, respectively, with Fe-Al electrode combination. The Al-Fe electrode combination had lower electrical energy consumption (2.29 kWh/m3) as compared to Fe-Al electrode combination (2.50 kWh/m3). The economic evaluation of electrodes showed that Al-Fe electrode combination was better than Fe-Al electrode combination. This revealed the superiority of aluminum as a sacrificial electrode over that of iron which can probably be attributed to better flocculation capabilities of aluminum than that of iron.

  12. Reactivity of [M2 (μ-Cl)2 (cod)2 ] (M=Ir, Rh) and [Ru(Cl)2 (cod)(CH3 CN)2 ] with Na[H2 B(bt)2 ]: Formation of Agostic versus Borate Complexes.

    Science.gov (United States)

    Bakthavachalam, K; Yuvaraj, K; Zafar, Mohammad; Ghosh, Sundargopal

    2016-11-21

    Treatment of [M2 (μ-Cl)2 (cod)2 ] (M=Ir and Rh) with Na[H2 B(bt)2 ] (cod=1,5-cyclooctadiene and bt=2-mercaptobenzothiazolyl) at low temperature led to the formation of dimetallaheterocycles [(Mcod)2 (bt)2 ], 1 and 2 (1: M=Ir and 2: M=Rh) and a borate complex [Rh(cod){κ(2) -S,S'-H2 B(bt)2 }], 3. Compounds 1 and 2 are structurally characterized metal analogues of 1,5-cyclooctadiene. Metal-metal bond distances of 3.6195(9) Å in 1 and 3.6749(9) Å in 2 are too long to consider as bonding. In an attempt to generate the Ru analogue of 1 and 2, that is [(Rucod)2 (bt)2 ], we have carried out the reaction of [Ru(Cl)2 (cod)(CH3 CN)2 ] with Na[H2 B(bt)2 ]. Interestingly, the reaction yielded agostic complexes [Ru(cod)L{κ(3) -H,S,S'-H2 B(bt)2 }], 4 and 5 (4: L=Cl; 5: L=C7 H4 NS2 ). One of the key differences between 4 and 5 is the presence of different ancillary ligands at the metal center. The natural bond orbital (NBO) analysis of 1 and 2 shows that there is four lone pairs of electrons on each metal center with a significant amount of d character. Furthermore, the electronic structures and the bonding of these complexes have been established on the ground of quantum-chemical calculations. All of the new compounds were characterized by IR, (1) H, (11) B, (13) C NMR spectroscopy, and X-ray crystallographic analysis.

  13. Localisation of nursery areas based on comparative analyses of the horizontal and vertical distribution patterns of juvenile Baltic cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Nielsen, J. Rasmus; Lundgren, Bo; Kristensen, Kasper

    2013-01-01

    ) are present in all areas of the central Baltic Sea (CBS), showing broad dispersal. However, their highest density in the Baltic Basins is found at localities with a 40–70 m bottom depth in waters with oxygen concentrations above 2 ml O2.l−1 and temperatures above 5°C. The smallest juveniles are also found......Knowledge of the spatial distribution of juvenile cod is essential for obtaining precise recruitment data to conduct sustainable management of the eastern and western Baltic cod stocks. In this study, the horizontal and vertical distribution and density patterns of settled juvenile 0- and 1-group...... patterns related to the seabed topography, water layer depth, and the presence of hydrographic frontal zones (pycnoclines) as well as intraspecific patterns in relation to the presence of adult cod. The extent of the nursery areas also depends on the cod year class strength. Juvenile cod (≥3 cm...

  14. Effects of COD/N ratio and DO concentration on simultaneous nitrification and denitrification in an airlift internal circulation membrane bioreactor

    Institute of Scientific and Technical Information of China (English)

    MENG Qingjuan; YANG Fenglin; LIU Lifen; MENG Fangang

    2008-01-01

    In this article, the effects of chemical oxygen demand, nitrogen (COD/N) ratio (4.90, 9.59, and 14.44), and dissolved oxygen concentration (DO) (0.5, 1.0, 1.5, and 3.0 mg/L) on simultaneous nitrification and denitrification (SND) were investigated using an airlift internal circulation membrane bioreactor (AIC-MBR) with synthetic wastewater. The results showed that the COD efficiencies were consistently greater than 90% regardless of changes in the COD/N ratio. At the COD/N ratio of 4.90 and 9.59, the system nitrogen removal efficiency became higher than 70%. However, the nitrogen removal efficiency decreased to less than 50%, as the COD/N ratio shifted to 14.44. When the operating DO concentration was maintained at 1.0 mg/L in AIC-MBR, a satisfying SND was achieved. Either low or high DO concentration could restrain SND.

  15. ATP, IMP, and glycogen in cod muscle at onset and during development of rigor mortis depend on the sampling location

    DEFF Research Database (Denmark)

    Cappeln, Gertrud; Jessen, Flemming

    2002-01-01

    Variation in glycogen, ATP, and IMP contents within individual cod muscles were studied in ice stored fish during the progress of rigor mortis. Rigor index was determined before muscle samples for chemical analyzes were taken at 16 different positions on the fish. During development of rigor, the...

  16. An experimental model of COD abatement in MBBR based on biofilm growth dynamic and on substrates' removal kinetics.

    Science.gov (United States)

    Siciliano, Alessio; De Rosa, Salvatore

    2016-08-01

    In this study, the performance of a lab-scale Moving Bed Biofilm Reactor (MBBR) under different operating conditions was analysed. Moreover, the dependence of the reaction rates both from the concentration and biodegradability of substrates and from the biofilm surface density, by means of several batch kinetic tests, was investigated. The reactor controls exhibited an increasing COD (Chemical Oxygen Demand) removal, reaching maximum yields (close to 90%) for influent loadings of up to12.5 gCOD/m(2)d. From this value, the pilot plant performance decreased to yields of only about 55% for influent loadings greater than 16 gCOD/m(2)d. In response to the influent loading increase, the biofilm surface density exhibited a logistic growing trend until reaching a maximum amount of total attached solids of about 9.5 g/m(2). The kinetic test results indicated that the COD removal rates for rapidly biodegradable, rapidly hydrolysable and slowly biodegradable substrates were not affected by the organic matter concentrations. Instead, first-order kinetics were detected with respect to biofilm surface density. The experimental results permitted the formulation of a mathematical model to predict the MBBR organic matter removal efficiency. The validity of the model was successfully tested in the lab-scale plant.

  17. An integrated mathematical model for chemical oxygen demand (COD) removal in moving bed biofilm reactors (MBBR) including predation and hydrolysis.

    Science.gov (United States)

    Revilla, Marta; Galán, Berta; Viguri, Javier R

    2016-07-01

    An integrated mathematical model is proposed for modelling a moving bed biofilm reactor (MBBR) for removal of chemical oxygen demand (COD) under aerobic conditions. The composite model combines the following: (i) a one-dimensional biofilm model, (ii) a bulk liquid model, and (iii) biological processes in the bulk liquid and biofilm considering the interactions among autotrophic, heterotrophic and predator microorganisms. Depending on the values for the soluble biodegradable COD loading rate (SCLR), the model takes into account a) the hydrolysis of slowly biodegradable compounds in the bulk liquid, and b) the growth of predator microorganisms in the bulk liquid and in the biofilm. The integration of the model and the SCLR allows a general description of the behaviour of COD removal by the MBBR under various conditions. The model is applied for two in-series MBBR wastewater plant from an integrated cellulose and viscose production and accurately describes the experimental concentrations of COD, total suspended solids (TSS), nitrogen and phosphorous obtained during 14 months working at different SCLRs and nutrient dosages. The representation of the microorganism group distribution in the biofilm and in the bulk liquid allow for verification of the presence of predator microorganisms in the second reactor under some operational conditions.

  18. A surgical method for implanting transmitters with sensors into the body cavity of cod (Gadus morhua L.)

    DEFF Research Database (Denmark)

    Pedersen, B.H.; Andersen, Niels Gerner

    1985-01-01

    Relatively complicated surgery is a necessity when implanting sensors internally in fish in order to measure physiological variables at specific locations. A surgical procedure from implanting transmitters with remote sensors into the body cavity of cod (Gadus morhua L.) is presented. The method...

  19. Characterization of the COD removal, electricity generation, and bacterial communities in microbial fuel cells treating molasses wastewater.

    Science.gov (United States)

    Lee, Yun-Yeong; Kim, Tae G; Cho, Kyung-Suk

    2016-11-09

    The chemical oxygen demand (COD) removal, electricity generation, and microbial communities were compared in 3 types of microbial fuel cells (MFCs) treating molasses wastewater. Single-chamber MFCs without and with a proton exchange membrane (PEM), and double-chamber MFC were constructed. A total of 10,000 mg L(-1) COD of molasses wastewater was continuously fed. The COD removal, electricity generation, and microbial communities in the two types of single-chamber MFCs were similar, indicating that the PEM did not enhance the reactor performance. The COD removal in the single-chamber MFCs (89-90%) was higher than that in the double-chamber MFC (50%). However, electricity generation in the double-chamber MFC was higher than that in the single-chamber MFCs. The current density (80 mA m(-2)) and power density (17 mW m(-2)) in the double-chamber MFC were 1.4- and 2.2-times higher than those in the single-chamber MFCs, respectively. The bacterial community structures in single- and double-chamber MFCs were also distinguishable. The amount of Proteobacteria in the double-chamber MFC was 2-3 times higher than those in the single-chamber MFCs. For the archaeal community, Methanothrix (96.4%) was remarkably dominant in the single-chamber MFCs, but Methanobacterium (35.1%), Methanosarcina (28.3%), and Methanothrix (16.2%) were abundant in the double-chamber MFC.

  20. Biogas-pH automation control strategy for optimizing organic loading rate of anaerobic membrane bioreactor treating high COD wastewater.

    Science.gov (United States)

    Yu, Dawei; Liu, Jibao; Sui, Qianwen; Wei, Yuansong

    2016-03-01

    Control of organic loading rate (OLR) is essential for anaerobic digestion treating high COD wastewater, which would cause operation failure by overload or less efficiency by underload. A novel biogas-pH automation control strategy using the combined gas-liquor phase monitoring was developed for an anaerobic membrane bioreactor (AnMBR) treating high COD (27.53 g·L(-1)) starch wastewater. The biogas-pH strategy was proceeded with threshold between biogas production rate >98 Nml·h(-1) preventing overload and pH>7.4 preventing underload, which were determined by methane production kinetics and pH titration of methanogenesis slurry, respectively. The OLR and the effluent COD were doubled as 11.81 kgCOD·kgVSS(-1)·d(-1) and halved as 253.4 mg·L(-1), respectively, comparing with a constant OLR control strategy. Meanwhile COD removal rate, biogas yield and methane concentration were synchronously improved to 99.1%, 312 Nml·gCODin(-1) and 74%, respectively. Using the biogas-pH strategy, AnMBR formed a "pH self-regulation ternary buffer system" which seizes carbon dioxide and hence provides sufficient buffering capacity.