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Sample records for asynchronous parallel evolution

  1. The Parallel Asynchronous Differential Evolution Method as a Tool to Analyze Synchrotron Scattering Experimental Data from Vesicular Systems*

    Directory of Open Access Journals (Sweden)

    Zhabitskaya Evgeniya

    2016-01-01

    Full Text Available In this work we use an Asynchronous Differential Evolution (ADE method to estimate parameters of the Separated Form Factor (SFF model which is used to investigate a structure of drug delivery Phospholipid Transport Nano System (PTNS unilamellar vesicles by experimental small angle synchrotron X-ray scattering spectra (SAXS. We compare the efficiency of different optimizing procedures (OP for the search for the SFF-model parameters. It is shown that the probability to find the global solution of this problem by ADE-methods is significantly higher than that by either Nelder-Mead method or a Quasi-Newton method with Davidon-Fletcher-Powell formula. The parallel realization of ADE accelerates the calculations significantly. The speed-up obtained by the parallel realization of ADE and results of the model are presented.

  2. Asynchronous Parallelization of a CFD Solver

    Directory of Open Access Journals (Sweden)

    Daniel S. Abdi

    2015-01-01

    Full Text Available A Navier-Stokes equations solver is parallelized to run on a cluster of computers using the domain decomposition method. Two approaches of communication and computation are investigated, namely, synchronous and asynchronous methods. Asynchronous communication between subdomains is not commonly used in CFD codes; however, it has a potential to alleviate scaling bottlenecks incurred due to processors having to wait for each other at designated synchronization points. A common way to avoid this idle time is to overlap asynchronous communication with computation. For this to work, however, there must be something useful and independent a processor can do while waiting for messages to arrive. We investigate an alternative approach of computation, namely, conducting asynchronous iterations to improve local subdomain solution while communication is in progress. An in-house CFD code is parallelized using message passing interface (MPI, and scalability tests are conducted that suggest asynchronous iterations are a viable way of parallelizing CFD code.

  3. Asynchronous parallel search in global optimization problems

    Energy Technology Data Exchange (ETDEWEB)

    Archetti, F.; Schoen, F.

    1982-01-01

    A class of asynchronous parallel search methods is proposed in order to solve the global optimization problem on a multiprocessor system, consisting of several processors which can communicate through a set of global variables contained in a memory shared by all processors. The speed-up ratio and memory contension effects are experimentally analyzed for some algorithms of this class. 6 references.

  4. Asynchronous parallel pattern search for nonlinear optimization

    Energy Technology Data Exchange (ETDEWEB)

    P. D. Hough; T. G. Kolda; V. J. Torczon

    2000-01-01

    Parallel pattern search (PPS) can be quite useful for engineering optimization problems characterized by a small number of variables (say 10--50) and by expensive objective function evaluations such as complex simulations that take from minutes to hours to run. However, PPS, which was originally designed for execution on homogeneous and tightly-coupled parallel machine, is not well suited to the more heterogeneous, loosely-coupled, and even fault-prone parallel systems available today. Specifically, PPS is hindered by synchronization penalties and cannot recover in the event of a failure. The authors introduce a new asynchronous and fault tolerant parallel pattern search (AAPS) method and demonstrate its effectiveness on both simple test problems as well as some engineering optimization problems

  5. Adaptive wavefront control with asynchronous stochastic parallel gradient descent clusters.

    Science.gov (United States)

    Vorontsov, Mikhail A; Carhart, Gary W

    2006-10-01

    A scalable adaptive optics (AO) control system architecture composed of asynchronous control clusters based on the stochastic parallel gradient descent (SPGD) optimization technique is discussed. It is shown that subdivision of the control channels into asynchronous SPGD clusters improves the AO system performance by better utilizing individual and/or group characteristics of adaptive system components. Results of numerical simulations are presented for two different adaptive receiver systems based on asynchronous SPGD clusters-one with a single deformable mirror with Zernike response functions and a second with tip-tilt and segmented wavefront correctors. We also discuss adaptive wavefront control based on asynchronous parallel optimization of several local performance metrics-a control architecture referred to as distributed adaptive optics (DAO). Analysis of the DAO system architecture demonstrated the potential for significant increase of the adaptation process convergence rate that occurs due to partial decoupling of the system control clusters optimizing individual performance metrics.

  6. A Parallel Particle Swarm Optimization Algorithm Accelerated by Asynchronous Evaluations

    Science.gov (United States)

    Venter, Gerhard; Sobieszczanski-Sobieski, Jaroslaw

    2005-01-01

    A parallel Particle Swarm Optimization (PSO) algorithm is presented. Particle swarm optimization is a fairly recent addition to the family of non-gradient based, probabilistic search algorithms that is based on a simplified social model and is closely tied to swarming theory. Although PSO algorithms present several attractive properties to the designer, they are plagued by high computational cost as measured by elapsed time. One approach to reduce the elapsed time is to make use of coarse-grained parallelization to evaluate the design points. Previous parallel PSO algorithms were mostly implemented in a synchronous manner, where all design points within a design iteration are evaluated before the next iteration is started. This approach leads to poor parallel speedup in cases where a heterogeneous parallel environment is used and/or where the analysis time depends on the design point being analyzed. This paper introduces an asynchronous parallel PSO algorithm that greatly improves the parallel e ciency. The asynchronous algorithm is benchmarked on a cluster assembled of Apple Macintosh G5 desktop computers, using the multi-disciplinary optimization of a typical transport aircraft wing as an example.

  7. Asynchronous parallel generating set search for linearly-constrained optimization.

    Energy Technology Data Exchange (ETDEWEB)

    Kolda, Tamara G.; Griffin, Joshua; Lewis, Robert Michael

    2007-04-01

    We describe an asynchronous parallel derivative-free algorithm for linearly-constrained optimization. Generating set search (GSS) is the basis of ourmethod. At each iteration, a GSS algorithm computes a set of search directionsand corresponding trial points and then evaluates the objective function valueat each trial point. Asynchronous versions of the algorithm have been developedin the unconstrained and bound-constrained cases which allow the iterations tocontinue (and new trial points to be generated and evaluated) as soon as anyother trial point completes. This enables better utilization of parallel resourcesand a reduction in overall runtime, especially for problems where the objec-tive function takes minutes or hours to compute. For linearly-constrained GSS,the convergence theory requires that the set of search directions conform to the3 nearby boundary. The complexity of developing the asynchronous algorithm forthe linearly-constrained case has to do with maintaining a suitable set of searchdirections as the search progresses and is the focus of this research. We describeour implementation in detail, including how to avoid function evaluations bycaching function values and using approximate look-ups. We test our imple-mentation on every CUTEr test problem with general linear constraints and upto 1000 variables. Without tuning to individual problems, our implementationwas able to solve 95% of the test problems with 10 or fewer variables, 75%of the problems with 11-100 variables, and nearly half of the problems with100-1000 variables. To the best of our knowledge, these are the best resultsthat have ever been achieved with a derivative-free method. Our asynchronousparallel implementation is freely available as part of the APPSPACK software.4

  8. Sideband-Harmonic Instability of Paralleled Inverters with Asynchronous Carriers

    DEFF Research Database (Denmark)

    Yang, Dongsheng; Wang, Xiongfei; Blaabjerg, Frede

    2017-01-01

    Paralleled inverters with asynchronous carriers are increasingly emerging into renewable power plants and other power-electronic-based power systems. The sideband harmonics resulting from the pulse width modulation tend to be different from one inverter to another, which may trigger sideband-harmonic...... resonances among the paralleled inverters. To address the sideband-harmonic instability, the nonlinearity of the digital pulse width modulator is analyzed first in this paper based on the harmonic balance principle. It is revealed that the dynamic sideband components corresponding to a given small......-signal perturbation can be far below the Nyquist frequency, and they may not be effectively attenuated by anti-aliasing filters. A multi-frequency impedance model is then developed for the inverter, which characterizes the dynamic coupling between the perturbed frequency component and the sideband frequency component...

  9. A parallel asynchronous decomposition for on-line contingency planning

    Energy Technology Data Exchange (ETDEWEB)

    Ramesh, V.C. [Illinois Inst. of Tech., Chicago, IL (United States). Electrical and Computer Engineering Dept.; Talukdar, S.N. [Carnegie Mellon Univ., Pittsburgh, PA (United States). Engineering Design Research Center

    1995-12-31

    Traditional formulations of security-constrained-optimal-power-flows represent contingencies by hard constraints. The disadvantages are four-fold. First, the conflicts among contingencies must be arbitrated apriori, before their effects are known. Second, the feasible region shrinks with increase in the number of contingencies. Third, computational time increases with the number of contingencies. Fourth, hard constraints provide poor models of fuzzy quantities such as equipment ratings and operating guidelines. This paper develops a modeling framework without these disadvantages. Specifically, it allows for soft constraints and always has feasible solutions. The effects of conflicts among contingencies are displayed so system operators can arbitrate them in an informed manner. Moreover, each contingency can be handled asynchronously and in parallel. In other words, the computational time, for handling an arbitrarily large number of contingencies, remains the same as for performing an optimal power flow without any contingencies (provided that a computer is dedicated to each contingency).

  10. A parallel asynchronous decomposition for on-line contingency planning

    Energy Technology Data Exchange (ETDEWEB)

    Ramesh, V.C. [Illinois Inst. of Tech., Chicago, IL (United States). Electrical and Computer Engineering Dept.; Talukdar, S.N. [Carnegie Mellon Univ., Pittsburgh, PA (United States). Engineering Design Research Center

    1996-02-01

    Traditional formulations of security-constrained-optimal-power-flows represent contingencies by hard constraints. The disadvantages are four-fold. First, the conflicts among contingencies must be arbitrated a priori, before their effects are known. Second, the feasible region shrinks with increase in the number of contingencies. Third, computational time increases with the number of contingencies. Fourth, hard constraints provide poor models of fuzzy quantities such as equipment ratings and operating guidelines. This paper develops a modeling framework without these disadvantages. Specifically, it allows for soft constraints and always has feasible solutions. The effects of conflicts among contingencies are displayed so system operators can arbitrate them in an informed manner. Moreover, each contingency can be handled asynchronously and in parallel. In other words, the computational time, for handling an arbitrarily large number of contingencies, remains the same as for performing an optimal power flow without any contingencies (provided that a computer is dedicated to each contingency).

  11. Asynchronous Task-Based Parallelization of Algebraic Multigrid

    KAUST Repository

    AlOnazi, Amani A.

    2017-06-23

    As processor clock rates become more dynamic and workloads become more adaptive, the vulnerability to global synchronization that already complicates programming for performance in today\\'s petascale environment will be exacerbated. Algebraic multigrid (AMG), the solver of choice in many large-scale PDE-based simulations, scales well in the weak sense, with fixed problem size per node, on tightly coupled systems when loads are well balanced and core performance is reliable. However, its strong scaling to many cores within a node is challenging. Reducing synchronization and increasing concurrency are vital adaptations of AMG to hybrid architectures. Recent communication-reducing improvements to classical additive AMG by Vassilevski and Yang improve concurrency and increase communication-computation overlap, while retaining convergence properties close to those of standard multiplicative AMG, but remain bulk synchronous.We extend the Vassilevski and Yang additive AMG to asynchronous task-based parallelism using a hybrid MPI+OmpSs (from the Barcelona Supercomputer Center) within a node, along with MPI for internode communications. We implement a tiling approach to decompose the grid hierarchy into parallel units within task containers. We compare against the MPI-only BoomerAMG and the Auxiliary-space Maxwell Solver (AMS) in the hypre library for the 3D Laplacian operator and the electromagnetic diffusion, respectively. In time to solution for a full solve an MPI-OmpSs hybrid improves over an all-MPI approach in strong scaling at full core count (32 threads per single Haswell node of the Cray XC40) and maintains this per node advantage as both weak scale to thousands of cores, with MPI between nodes.

  12. An Evaluation of Parallel Synchronous and Conservative Asynchronous Logic-Level Simulations

    Directory of Open Access Journals (Sweden)

    Ausif Mahmood

    1996-01-01

    a circuit remain fixed during the entire simulation. We remove this limitation and, by extending the analyses to multi-input, multi-output circuits with an arbitrary number of input events, show that the conservative asynchronous simulation extracts more parallelism and executes faster than synchronous simulation in general. Our conclusions are supported by a comparison of the idealized execution times of synchronous and conservative asynchronous algorithms on ISCAS combinational and sequential benchmark circuits.

  13. A new asynchronous parallel algorithm for inferring large-scale gene regulatory networks.

    Directory of Open Access Journals (Sweden)

    Xiangyun Xiao

    Full Text Available The reconstruction of gene regulatory networks (GRNs from high-throughput experimental data has been considered one of the most important issues in systems biology research. With the development of high-throughput technology and the complexity of biological problems, we need to reconstruct GRNs that contain thousands of genes. However, when many existing algorithms are used to handle these large-scale problems, they will encounter two important issues: low accuracy and high computational cost. To overcome these difficulties, the main goal of this study is to design an effective parallel algorithm to infer large-scale GRNs based on high-performance parallel computing environments. In this study, we proposed a novel asynchronous parallel framework to improve the accuracy and lower the time complexity of large-scale GRN inference by combining splitting technology and ordinary differential equation (ODE-based optimization. The presented algorithm uses the sparsity and modularity of GRNs to split whole large-scale GRNs into many small-scale modular subnetworks. Through the ODE-based optimization of all subnetworks in parallel and their asynchronous communications, we can easily obtain the parameters of the whole network. To test the performance of the proposed approach, we used well-known benchmark datasets from Dialogue for Reverse Engineering Assessments and Methods challenge (DREAM, experimentally determined GRN of Escherichia coli and one published dataset that contains more than 10 thousand genes to compare the proposed approach with several popular algorithms on the same high-performance computing environments in terms of both accuracy and time complexity. The numerical results demonstrate that our parallel algorithm exhibits obvious superiority in inferring large-scale GRNs.

  14. Asynchronous evolution of physiology and morphology in Anolis lizards.

    Science.gov (United States)

    Hertz, Paul E; Arima, Yuzo; Harrison, Alexis; Huey, Raymond B; Losos, Jonathan B; Glor, Richard E

    2013-07-01

    Species-rich adaptive radiations typically diversify along several distinct ecological axes, each characterized by morphological, physiological, and behavioral adaptations. We test here whether different types of adaptive traits share similar patterns of evolution within a radiation by investigating patterns of evolution of morphological traits associated with microhabitat specialization and of physiological traits associated with thermal biology in Anolis lizards. Previous studies of anoles suggest that close relatives share the same "structural niche" (i.e., use the same types of perches) and are similar in body size and shape, but live in different "climatic niches" (i.e., use habitats with different insolation and temperature profiles). Because morphology is closely tied to structural niche and field active body temperatures are tied to climatic niches in Anolis, we expected phylogenetic analyses to show that morphology is more evolutionarily conservative than thermal physiology. In support of this hypothesis, we find (1) that thermal biology exhibits more divergence among recently diverged Anolis taxa than does morphology; and (2) diversification of thermal biology among all species often follows diversification in morphology. These conclusions are remarkably consistent with predictions made by anole biologists in the 1960s and 1970s. © 2013 The Author(s). Evolution © 2013 The Society for the Study of Evolution.

  15. Parallel tempering simulation of the three-dimensional Edwards-Anderson model with compact asynchronous multispin coding on GPU

    Science.gov (United States)

    Fang, Ye; Feng, Sheng; Tam, Ka-Ming; Yun, Zhifeng; Moreno, Juana; Ramanujam, J.; Jarrell, Mark

    2014-10-01

    Monte Carlo simulations of the Ising model play an important role in the field of computational statistical physics, and they have revealed many properties of the model over the past few decades. However, the effect of frustration due to random disorder, in particular the possible spin glass phase, remains a crucial but poorly understood problem. One of the obstacles in the Monte Carlo simulation of random frustrated systems is their long relaxation time making an efficient parallel implementation on state-of-the-art computation platforms highly desirable. The Graphics Processing Unit (GPU) is such a platform that provides an opportunity to significantly enhance the computational performance and thus gain new insight into this problem. In this paper, we present optimization and tuning approaches for the CUDA implementation of the spin glass simulation on GPUs. We discuss the integration of various design alternatives, such as GPU kernel construction with minimal communication, memory tiling, and look-up tables. We present a binary data format, Compact Asynchronous Multispin Coding (CAMSC), which provides an additional 28.4% speedup compared with the traditionally used Asynchronous Multispin Coding (AMSC). Our overall design sustains a performance of 33.5 ps per spin flip attempt for simulating the three-dimensional Edwards-Anderson model with parallel tempering, which significantly improves the performance over existing GPU implementations.

  16. Stellar Evolution and Social Evolution: A Study in Parallel Processes

    Science.gov (United States)

    Carneiro, Robert L.

    From the beginning of anthropology, social evolution has been one of its major interests. However, in recent years the study of this process has languished. Accordingly, those anthropologists who still consider social evolution to be of central importance to their discipline, and who continue to pursue it, find their endeavor bolstered when parallel instances of evolutionary reconstructions can be demonstrated in other fields. Stellar evolution has long been a prime interest to astronomers, and their progress in deciphering its course has been truly remarkable. In examining astronomers' reconstructions of stellar evolution, I have been struck by a number of similarities between ways stars and societies have evolved. The parallels actually begin with the method used by both disciplines, namely, the comparative method. In astronomy, the method involves plotting stars on a Hertzsprung-Russell Diagram, and interpreting, diachonically, the pattern made by essentially synchronic data used for plotting. The comparative method is particularly appropriate when one is studying a process that cannot be observed over its full range in the life of any single individual, be it a star or a society. Parallels also occur in that stars and societies have each followed distinctive stages in their evolution. These stages are, in both cases, sometimes unlinear and sometimes multilinear. Moreover, the distinction drawn by anthropologists between a pristine and a secondary state (which depends on whether state so represented is the first such occurrence in an area, or was a later development derivative from earlier states) finds its astronomical parallel in the relationship existing between Population II and Population I stars. These and other similarities between stellar and social evolution will be cited and discussed.

  17. Asynchronous broadcast for ordered delivery between compute nodes in a parallel computing system where packet header space is limited

    Science.gov (United States)

    Kumar, Sameer

    2010-06-15

    Disclosed is a mechanism on receiving processors in a parallel computing system for providing order to data packets received from a broadcast call and to distinguish data packets received at nodes from several incoming asynchronous broadcast messages where header space is limited. In the present invention, processors at lower leafs of a tree do not need to obtain a broadcast message by directly accessing the data in a root processor's buffer. Instead, each subsequent intermediate node's rank id information is squeezed into the software header of packet headers. In turn, the entire broadcast message is not transferred from the root processor to each processor in a communicator but instead is replicated on several intermediate nodes which then replicated the message to nodes in lower leafs. Hence, the intermediate compute nodes become "virtual root compute nodes" for the purpose of replicating the broadcast message to lower levels of a tree.

  18. Applications of New Surrogate Global Optimization Algorithms including Efficient Synchronous and Asynchronous Parallelism for Calibration of Expensive Nonlinear Geophysical Simulation Models.

    Science.gov (United States)

    Shoemaker, C. A.; Pang, M.; Akhtar, T.; Bindel, D.

    2016-12-01

    New parallel surrogate global optimization algorithms are developed and applied to objective functions that are expensive simulations (possibly with multiple local minima). The algorithms can be applied to most geophysical simulations, including those with nonlinear partial differential equations. The optimization does not require simulations be parallelized. Asynchronous (and synchronous) parallel execution is available in the optimization toolbox "pySOT". The parallel algorithms are modified from serial to eliminate fine grained parallelism. The optimization is computed with open source software pySOT, a Surrogate Global Optimization Toolbox that allows user to pick the type of surrogate (or ensembles), the search procedure on surrogate, and the type of parallelism (synchronous or asynchronous). pySOT also allows the user to develop new algorithms by modifying parts of the code. In the applications here, the objective function takes up to 30 minutes for one simulation, and serial optimization can take over 200 hours. Results from Yellowstone (NSF) and NCSS (Singapore) supercomputers are given for groundwater contaminant hydrology simulations with applications to model parameter estimation and decontamination management. All results are compared with alternatives. The first results are for optimization of pumping at many wells to reduce cost for decontamination of groundwater at a superfund site. The optimization runs with up to 128 processors. Superlinear speed up is obtained for up to 16 processors, and efficiency with 64 processors is over 80%. Each evaluation of the objective function requires the solution of nonlinear partial differential equations to describe the impact of spatially distributed pumping and model parameters on model predictions for the spatial and temporal distribution of groundwater contaminants. The second application uses an asynchronous parallel global optimization for groundwater quality model calibration. The time for a single objective

  19. Clonal expansion and linear genome evolution through breast cancer progression from pre-invasive stages to asynchronous metastasis

    DEFF Research Database (Denmark)

    Krøigård, Anne Bruun; Larsen, Martin Jakob; Lænkholm, Anne Vibeke

    2015-01-01

    Evolution of the breast cancer genome from pre-invasive stages to asynchronous metastasis is complex and mostly unexplored, but highly demanded as it may provide novel markers for and mechanistic insights in cancer progression. The increasing use of personalized therapy of breast cancer...... the different stages of tumor evolution in this patient emphasizes the importance of molecular profiling of metastatic tissue directing molecularly targeted therapy at recurrence....

  20. Clonal expansion and linear genome evolution through breast cancer progression from pre-invasive stages to asynchronous metastasis

    DEFF Research Database (Denmark)

    Krøigård, Anne Bruun; Larsen, Martin Jakob; Lænkholm, Anne-Vibeke

    2015-01-01

    Evolution of the breast cancer genome from pre-invasive stages to asynchronous metastasis is complex and mostly unexplored, but highly demanded as it may provide novel markers for and mechanistic insights in cancer progression. The increasing use of personalized therapy of breast cancer...... necessitates knowledge of the degree of genomic concordance between different steps of malignant progression as primary tumors often are used as surrogates of systemic disease. Based on exome sequencing we performed copy number profiling and point mutation detection on successive steps of breast cancer...... progression from one breast cancer patient, including two different regions of Ductal Carcinoma In Situ (DCIS), primary tumor and an asynchronous metastasis. We identify a remarkable landscape of somatic mutations, retained throughout breast cancer progression and with new mutational events emerging at each...

  1. The probability of parallel genetic evolution from standing genetic variation.

    Science.gov (United States)

    MacPherson, A; Nuismer, S L

    2017-02-01

    Parallel evolution is often assumed to result from repeated adaptation to novel, yet ecologically similar, environments. Here, we develop and analyse a mathematical model that predicts the probability of parallel genetic evolution from standing genetic variation as a function of the strength of phenotypic selection and constraints imposed by genetic architecture. Our results show that the probability of parallel genetic evolution increases with the strength of natural selection and effective population size and is particularly likely to occur for genes with large phenotypic effects. Building on these results, we develop a Bayesian framework for estimating the strength of parallel phenotypic selection from genetic data. Using extensive individual-based simulations, we show that our estimator is robust across a wide range of genetic and evolutionary scenarios and provides a useful tool for rigorously testing the hypothesis that parallel genetic evolution is the result of adaptive evolution. An important result that emerges from our analyses is that existing studies of parallel genetic evolution frequently rely on data that is insufficient for distinguishing between adaptive evolution and neutral evolution driven by random genetic drift. Overcoming this challenge will require sampling more populations and the inclusion of larger numbers of loci. © 2016 European Society For Evolutionary Biology. Journal of Evolutionary Biology © 2016 European Society For Evolutionary Biology.

  2. Asynchronous updates can promote the evolution of cooperation on multiplex networks

    Science.gov (United States)

    Allen, James M.; Hoyle, Rebecca B.

    2017-04-01

    We study the importance to the frequency of cooperation of the choice of updating strategies in a game played asynchronously or synchronously across layers in a multiplex network. Updating asynchronously in the public goods game leads to higher frequencies of cooperation compared to synchronous updates. How large this effect is depends on the sensitivity of the game dynamics to changes in the number of cooperators surrounding a player, with the largest effect observed when players payoffs are small. The discovery of this effect enhances understanding of cooperation on multiplex networks, and demonstrates a new way to maintain cooperation in these systems.

  3. Parallel evolution controlled by adaptation and covariation in ammonoid cephalopods

    OpenAIRE

    Klug Christian; De Baets Kenneth; Monnet Claude

    2011-01-01

    Abstract Background A major goal in evolutionary biology is to understand the processes that shape the evolutionary trajectory of clades. The repeated and similar large-scale morphological evolutionary trends of distinct lineages suggest that adaptation by means of natural selection (functional constraints) is the major cause of parallel evolution, a very common phenomenon in extinct and extant lineages. However, parallel evolution can result from other processes, which are usually ignored or...

  4. Error characterization for asynchronous computations: Proxy equation approach

    Science.gov (United States)

    Sallai, Gabriella; Mittal, Ankita; Girimaji, Sharath

    2017-11-01

    Numerical techniques for asynchronous fluid flow simulations are currently under development to enable efficient utilization of massively parallel computers. These numerical approaches attempt to accurately solve time evolution of transport equations using spatial information at different time levels. The truncation error of asynchronous methods can be divided into two parts: delay dependent (EA) or asynchronous error and delay independent (ES) or synchronous error. The focus of this study is a specific asynchronous error mitigation technique called proxy-equation approach. The aim of this study is to examine these errors as a function of the characteristic wavelength of the solution. Mitigation of asynchronous effects requires that the asynchronous error be smaller than synchronous truncation error. For a simple convection-diffusion equation, proxy-equation error analysis identifies critical initial wave-number, λc. At smaller wave numbers, synchronous error are larger than asynchronous errors. We examine various approaches to increase the value of λc in order to improve the range of applicability of proxy-equation approach.

  5. Evolutionary history and genetic parallelism affect correlated responses to evolution.

    Science.gov (United States)

    Le Gac, Mickael; Cooper, Tim F; Cruveiller, Stéphane; Médigue, Claudine; Schneider, Dominique

    2013-06-01

    We investigated the relationship between genomic and phenotypic evolution among replicate populations of Escherichia coli evolved for 1000 generations in four different environments. By resequencing evolved genomes, we identified parallel changes in genes encoding transcription regulators within and between environments. Depending on both the environment and the altered gene, genetic parallelism at the gene level involved mutations that affected identical codons, protein domains or were widely distributed across the gene. Evolved clones were characterized by parallel phenotypic changes in their respective evolution environments but also in the three alternative environments. Phenotypic parallelism was high for clones that evolved in the same environment, even in the absence of genetic parallelism. By contrast, clones that evolved in different environments revealed a higher parallelism in correlated responses when they shared mutated genes. Altogether, this work shows that after an environmental change or the colonization of a new habitat, similar ecological performance might be expected from individuals that share mutated genes or that experienced similar past selective pressures.

  6. Causes of molecular convergence and parallelism in protein evolution.

    Science.gov (United States)

    Storz, Jay F

    2016-04-01

    To what extent is the convergent evolution of protein function attributable to convergent or parallel changes at the amino acid level? The mutations that contribute to adaptive protein evolution may represent a biased subset of all possible beneficial mutations owing to mutation bias and/or variation in the magnitude of deleterious pleiotropy. A key finding is that the fitness effects of amino acid mutations are often conditional on genetic background. This context dependence (epistasis) can reduce the probability of convergence and parallelism because it reduces the number of possible mutations that are unconditionally acceptable in divergent genetic backgrounds. Here, I review factors that influence the probability of replicated evolution at the molecular level.

  7. Parallel evolution controlled by adaptation and covariation in ammonoid cephalopods

    Directory of Open Access Journals (Sweden)

    Klug Christian

    2011-04-01

    Full Text Available Abstract Background A major goal in evolutionary biology is to understand the processes that shape the evolutionary trajectory of clades. The repeated and similar large-scale morphological evolutionary trends of distinct lineages suggest that adaptation by means of natural selection (functional constraints is the major cause of parallel evolution, a very common phenomenon in extinct and extant lineages. However, parallel evolution can result from other processes, which are usually ignored or difficult to identify, such as developmental constraints. Hence, understanding the underlying processes of parallel evolution still requires further research. Results Herein, we present a possible case of parallel evolution between two ammonoid lineages (Auguritidae and Pinacitidae of Early-Middle Devonian age (405-395 Ma, which are extinct cephalopods with an external, chambered shell. In time and through phylogenetic order of appearance, both lineages display a morphological shift toward more involute coiling (i.e. more tightly coiled whorls, larger adult body size, more complex suture line (the folded walls separating the gas-filled buoyancy-chambers, and the development of an umbilical lid (a very peculiar extension of the lateral shell wall covering the umbilicus in the most derived taxa. Increased involution toward shells with closed umbilicus has been demonstrated to reflect improved hydrodynamic properties of the shell and thus likely results from similar natural selection pressures. The peculiar umbilical lid might have also added to the improvement of the hydrodynamic properties of the shell. Finally, increasing complexity of suture lines likely results from covariation induced by trends of increasing adult size and whorl overlap given the morphogenetic properties of the suture. Conclusions The morphological evolution of these two Devonian ammonoid lineages follows a near parallel evolutionary path for some important shell characters during several

  8. Parallel evolution controlled by adaptation and covariation in ammonoid cephalopods.

    Science.gov (United States)

    Monnet, Claude; De Baets, Kenneth; Klug, Christian

    2011-04-29

    A major goal in evolutionary biology is to understand the processes that shape the evolutionary trajectory of clades. The repeated and similar large-scale morphological evolutionary trends of distinct lineages suggest that adaptation by means of natural selection (functional constraints) is the major cause of parallel evolution, a very common phenomenon in extinct and extant lineages. However, parallel evolution can result from other processes, which are usually ignored or difficult to identify, such as developmental constraints. Hence, understanding the underlying processes of parallel evolution still requires further research. Herein, we present a possible case of parallel evolution between two ammonoid lineages (Auguritidae and Pinacitidae) of Early-Middle Devonian age (405-395 Ma), which are extinct cephalopods with an external, chambered shell. In time and through phylogenetic order of appearance, both lineages display a morphological shift toward more involute coiling (i.e. more tightly coiled whorls), larger adult body size, more complex suture line (the folded walls separating the gas-filled buoyancy-chambers), and the development of an umbilical lid (a very peculiar extension of the lateral shell wall covering the umbilicus) in the most derived taxa. Increased involution toward shells with closed umbilicus has been demonstrated to reflect improved hydrodynamic properties of the shell and thus likely results from similar natural selection pressures. The peculiar umbilical lid might have also added to the improvement of the hydrodynamic properties of the shell. Finally, increasing complexity of suture lines likely results from covariation induced by trends of increasing adult size and whorl overlap given the morphogenetic properties of the suture. The morphological evolution of these two Devonian ammonoid lineages follows a near parallel evolutionary path for some important shell characters during several million years and through their phylogeny. Evolution

  9. Asynchronous Multiparty Computation

    DEFF Research Database (Denmark)

    Damgård, Ivan Bjerre; Geisler, Martin; Krøigaard, Mikkel

    2009-01-01

    less than n/3 players. We also present a software framework for implementation of asynchronous protocols called VIFF (Virtual Ideal Functionality Framework), which allows automatic parallelization of primitive operations such as secure multiplications, without having to resort to complicated...

  10. From evolution theory to parallel and distributed genetic

    CERN Multimedia

    CERN. Geneva

    2007-01-01

    Lecture #1: From Evolution Theory to Evolutionary Computation. Evolutionary computation is a subfield of artificial intelligence (more particularly computational intelligence) involving combinatorial optimization problems, which are based to some degree on the evolution of biological life in the natural world. In this tutorial we will review the source of inspiration for this metaheuristic and its capability for solving problems. We will show the main flavours within the field, and different problems that have been successfully solved employing this kind of techniques. Lecture #2: Parallel and Distributed Genetic Programming. The successful application of Genetic Programming (GP, one of the available Evolutionary Algorithms) to optimization problems has encouraged an increasing number of researchers to apply these techniques to a large set of problems. Given the difficulty of some problems, much effort has been applied to improving the efficiency of GP during the last few years. Among the available proposals,...

  11. Parallel evolution of the genetic code in arthropod mitochondrial genomes.

    Directory of Open Access Journals (Sweden)

    Federico Abascal

    2006-05-01

    Full Text Available The genetic code provides the translation table necessary to transform the information contained in DNA into the language of proteins. In this table, a correspondence between each codon and each amino acid is established: tRNA is the main adaptor that links the two. Although the genetic code is nearly universal, several variants of this code have been described in a wide range of nuclear and organellar systems, especially in metazoan mitochondria. These variants are generally found by searching for conserved positions that consistently code for a specific alternative amino acid in a new species. We have devised an accurate computational method to automate these comparisons, and have tested it with 626 metazoan mitochondrial genomes. Our results indicate that several arthropods have a new genetic code and translate the codon AGG as lysine instead of serine (as in the invertebrate mitochondrial genetic code or arginine (as in the standard genetic code. We have investigated the evolution of the genetic code in the arthropods and found several events of parallel evolution in which the AGG codon was reassigned between serine and lysine. Our analyses also revealed correlated evolution between the arthropod genetic codes and the tRNA-Lys/-Ser, which show specific point mutations at the anticodons. These rather simple mutations, together with a low usage of the AGG codon, might explain the recurrence of the AGG reassignments.

  12. Asynchronous warming and δ18O evolution of deep Atlantic water masses during the last deglaciation.

    Science.gov (United States)

    Zhang, Jiaxu; Liu, Zhengyu; Brady, Esther C; Oppo, Delia W; Clark, Peter U; Jahn, Alexandra; Marcott, Shaun A; Lindsay, Keith

    2017-10-17

    The large-scale reorganization of deep ocean circulation in the Atlantic involving changes in North Atlantic Deep Water (NADW) and Antarctic Bottom Water (AABW) played a critical role in regulating hemispheric and global climate during the last deglaciation. However, changes in the relative contributions of NADW and AABW and their properties are poorly constrained by marine records, including δ18O of benthic foraminiferal calcite (δ18Oc). Here, we use an isotope-enabled ocean general circulation model with realistic geometry and forcing conditions to simulate the deglacial water mass and δ18O evolution. Model results suggest that, in response to North Atlantic freshwater forcing during the early phase of the last deglaciation, NADW nearly collapses, while AABW mildly weakens. Rather than reflecting changes in NADW or AABW properties caused by freshwater input as suggested previously, the observed phasing difference of deep δ18Oc likely reflects early warming of the deep northern North Atlantic by ∼1.4 °C, while deep Southern Ocean temperature remains largely unchanged. We propose a thermodynamic mechanism to explain the early warming in the North Atlantic, featuring a strong middepth warming and enhanced downward heat flux via vertical mixing. Our results emphasize that the way that ocean circulation affects heat, a dynamic tracer, is considerably different from how it affects passive tracers, like δ18O, and call for caution when inferring water mass changes from δ18Oc records while assuming uniform changes in deep temperatures.

  13. Asynchronous warming and δ18O evolution of deep Atlantic water masses during the last deglaciation

    Science.gov (United States)

    Zhang, Jiaxu; Liu, Zhengyu; Brady, Esther C.; Oppo, Delia W.; Clark, Peter U.; Jahn, Alexandra; Marcott, Shaun A.; Lindsay, Keith

    2017-10-01

    The large-scale reorganization of deep ocean circulation in the Atlantic involving changes in North Atlantic Deep Water (NADW) and Antarctic Bottom Water (AABW) played a critical role in regulating hemispheric and global climate during the last deglaciation. However, changes in the relative contributions of NADW and AABW and their properties are poorly constrained by marine records, including δ18O of benthic foraminiferal calcite (δ18Oc). Here, we use an isotope-enabled ocean general circulation model with realistic geometry and forcing conditions to simulate the deglacial water mass and δ18O evolution. Model results suggest that, in response to North Atlantic freshwater forcing during the early phase of the last deglaciation, NADW nearly collapses, while AABW mildly weakens. Rather than reflecting changes in NADW or AABW properties caused by freshwater input as suggested previously, the observed phasing difference of deep δ18Oc likely reflects early warming of the deep northern North Atlantic by ˜1.4 °C, while deep Southern Ocean temperature remains largely unchanged. We propose a thermodynamic mechanism to explain the early warming in the North Atlantic, featuring a strong middepth warming and enhanced downward heat flux via vertical mixing. Our results emphasize that the way that ocean circulation affects heat, a dynamic tracer, is considerably different from how it affects passive tracers, like δ18O, and call for caution when inferring water mass changes from δ18Oc records while assuming uniform changes in deep temperatures.

  14. A systemic approach for modeling biological evolution using Parallel DEVS.

    Science.gov (United States)

    Heredia, Daniel; Sanz, Victorino; Urquia, Alfonso; Sandín, Máximo

    2015-08-01

    A new model for studying the evolution of living organisms is proposed in this manuscript. The proposed model is based on a non-neodarwinian systemic approach. The model is focused on considering several controversies and open discussions about modern evolutionary biology. Additionally, a simplification of the proposed model, named EvoDEVS, has been mathematically described using the Parallel DEVS formalism and implemented as a computer program using the DEVSLib Modelica library. EvoDEVS serves as an experimental platform to study different conditions and scenarios by means of computer simulations. Two preliminary case studies are presented to illustrate the behavior of the model and validate its results. EvoDEVS is freely available at http://www.euclides.dia.uned.es. Copyright © 2015 Elsevier Ireland Ltd. All rights reserved.

  15. Parallel Evolution of Cold Tolerance within Drosophila melanogaster

    Science.gov (United States)

    Braun, Dylan T.; Lack, Justin B.

    2017-01-01

    Drosophila melanogaster originated in tropical Africa before expanding into strikingly different temperate climates in Eurasia and beyond. Here, we find elevated cold tolerance in three distinct geographic regions: beyond the well-studied non-African case, we show that populations from the highlands of Ethiopia and South Africa have significantly increased cold tolerance as well. We observe greater cold tolerance in outbred versus inbred flies, but only in populations with higher inversion frequencies. Each cold-adapted population shows lower inversion frequencies than a closely-related warm-adapted population, suggesting that inversion frequencies may decrease with altitude in addition to latitude. Using the FST-based “Population Branch Excess” statistic (PBE), we found only limited evidence for parallel genetic differentiation at the scale of ∼4 kb windows, specifically between Ethiopian and South African cold-adapted populations. And yet, when we looked for single nucleotide polymorphisms (SNPs) with codirectional frequency change in two or three cold-adapted populations, strong genomic enrichments were observed from all comparisons. These findings could reflect an important role for selection on standing genetic variation leading to “soft sweeps”. One SNP showed sufficient codirectional frequency change in all cold-adapted populations to achieve experiment-wide significance: an intronic variant in the synaptic gene Prosap. Another codirectional outlier SNP, at senseless-2, had a strong association with our cold trait measurements, but in the opposite direction as predicted. More generally, proteins involved in neurotransmission were enriched as potential targets of parallel adaptation. The ability to study cold tolerance evolution in a parallel framework will enhance this classic study system for climate adaptation. PMID:27777283

  16. Genetic and developmental basis for parallel evolution and its significance for hominoid evolution.

    Science.gov (United States)

    Reno, Philip L

    2014-01-01

    Greater understanding of ape comparative anatomy and evolutionary history has brought a general appreciation that the hominoid radiation is characterized by substantial homoplasy.(1-4) However, little consensus has been reached regarding which features result from repeated evolution. This has important implications for reconstructing ancestral states throughout hominoid evolution, including the nature of the Pan-Homo last common ancestor (LCA). Advances from evolutionary developmental biology (evo-devo) have expanded the diversity of model organisms available for uncovering the morphogenetic mechanisms underlying instances of repeated phenotypic change. Of particular relevance to hominoids are data from adaptive radiations of birds, fish, and even flies demonstrating that parallel phenotypic changes often use similar genetic and developmental mechanisms. The frequent reuse of a limited set of genes and pathways underlying phenotypic homoplasy suggests that the conserved nature of the genetic and developmental architecture of animals can influence evolutionary outcomes. Such biases are particularly likely to be shared by closely related taxa that reside in similar ecological niches and face common selective pressures. Consideration of these developmental and ecological factors provides a strong theoretical justification for the substantial homoplasy observed in the evolution of complex characters and the remarkable parallel similarities that can occur in closely related taxa. Thus, as in other branches of the hominoid radiation, repeated phenotypic evolution within African apes is also a distinct possibility. If so, the availability of complete genomes for each of the hominoid genera makes them another model to explore the genetic basis of repeated evolution. © 2014 Wiley Periodicals, Inc.

  17. Testing the role of genetic background in parallel evolution using the comparative experimental evolution of antibiotic resistance.

    Science.gov (United States)

    Vogwill, Tom; Kojadinovic, Mila; Furió, Victoria; MacLean, R Craig

    2014-12-01

    Parallel evolution is the independent evolution of the same phenotype or genotype in response to the same selection pressure. There are examples of parallel molecular evolution across divergent genetic backgrounds, suggesting that genetic background may not play an important role in determining the outcome of adaptation. Here, we measure the influence of genetic background on phenotypic and molecular adaptation by combining experimental evolution with comparative analysis. We selected for resistance to the antibiotic rifampicin in eight strains of bacteria from the genus Pseudomonas using a short term selection experiment. Adaptation occurred by 47 mutations at conserved sites in rpoB, the target of rifampicin, and due to the high diversity of possible mutations the probability of within-strain parallel evolution was low. The probability of between-strain parallel evolution was only marginally lower, because different strains substituted similar rpoB mutations. In contrast, we found that more than 30% of the phenotypic variation in the growth rate of evolved clones was attributable to among-strain differences. Parallel molecular evolution across strains resulted in divergent phenotypic evolution because rpoB mutations had different effects on growth rate in different strains. This study shows that genetic divergence between strains constrains parallel phenotypic evolution, but had little detectable impact on the molecular basis of adaptation in this system. © The Author 2014. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

  18. The effect of selection environment on the probability of parallel evolution.

    Science.gov (United States)

    Bailey, Susan F; Rodrigue, Nicolas; Kassen, Rees

    2015-06-01

    Across the great diversity of life, there are many compelling examples of parallel and convergent evolution-similar evolutionary changes arising in independently evolving populations. Parallel evolution is often taken to be strong evidence of adaptation occurring in populations that are highly constrained in their genetic variation. Theoretical models suggest a few potential factors driving the probability of parallel evolution, but experimental tests are needed. In this study, we quantify the degree of parallel evolution in 15 replicate populations of Pseudomonas fluorescens evolved in five different environments that varied in resource type and arrangement. We identified repeat changes across multiple levels of biological organization from phenotype, to gene, to nucleotide, and tested the impact of 1) selection environment, 2) the degree of adaptation, and 3) the degree of heterogeneity in the environment on the degree of parallel evolution at the gene-level. We saw, as expected, that parallel evolution occurred more often between populations evolved in the same environment; however, the extent of parallel evolution varied widely. The degree of adaptation did not significantly explain variation in the extent of parallelism in our system but number of available beneficial mutations correlated negatively with parallel evolution. In addition, degree of parallel evolution was significantly higher in populations evolved in a spatially structured, multiresource environment, suggesting that environmental heterogeneity may be an important factor constraining adaptation. Overall, our results stress the importance of environment in driving parallel evolutionary changes and point to a number of avenues for future work for understanding when evolution is predictable. © The Author 2015. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  19. Generalized Asynchronous Systems

    Directory of Open Access Journals (Sweden)

    E. S. Kudryashova

    2012-01-01

    Full Text Available The paper consider a mathematical model of a concurrent system, the special case of which is an asynchronous system. Distributed asynchronous automata are introduced here. It is proved that Petri nets and transition systems with independence can be considered as distributed asynchronous automata. Time distributed asynchronous automata are defined in a standard way by correspondence which relates events with time intervals. It is proved that the time distributed asynchronous automata generalize time Petri nets and asynchronous systems.

  20. Pteros 2.0: Evolution of the fast parallel molecular analysis library for C++ and python.

    Science.gov (United States)

    Yesylevskyy, Semen O

    2015-07-15

    Pteros is the high-performance open-source library for molecular modeling and analysis of molecular dynamics trajectories. Starting from version 2.0 Pteros is available for C++ and Python programming languages with very similar interfaces. This makes it suitable for writing complex reusable programs in C++ and simple interactive scripts in Python alike. New version improves the facilities for asynchronous trajectory reading and parallel execution of analysis tasks by introducing analysis plugins which could be written in either C++ or Python in completely uniform way. The high level of abstraction provided by analysis plugins greatly simplifies prototyping and implementation of complex analysis algorithms. Pteros is available for free under Artistic License from http://sourceforge.net/projects/pteros/. © 2015 Wiley Periodicals, Inc.

  1. Parallel evolution of transcriptome architecture during genome reorganization

    Science.gov (United States)

    Yoon, Sung Ho; Reiss, David J.; Bare, J. Christopher; Tenenbaum, Dan; Pan, Min; Slagel, Joseph; Moritz, Robert L.; Lim, Sujung; Hackett, Murray; Menon, Angeli Lal; Adams, Michael W.W.; Barnebey, Adam; Yannone, Steven M.; Leigh, John A.; Baliga, Nitin S.

    2011-01-01

    Assembly of genes into operons is generally viewed as an important process during the continual adaptation of microbes to changing environmental challenges. However, the genome reorganization events that drive this process are also the roots of instability for existing operons. We have determined that there exists a statistically significant trend that correlates the proportion of genes encoded in operons in archaea to their phylogenetic lineage. We have further characterized how microbes deal with operon instability by mapping and comparing transcriptome architectures of four phylogenetically diverse extremophiles that span the range of operon stabilities observed across archaeal lineages: a photoheterotrophic halophile (Halobacterium salinarum NRC-1), a hydrogenotrophic methanogen (Methanococcus maripaludis S2), an acidophilic and aerobic thermophile (Sulfolobus solfataricus P2), and an anaerobic hyperthermophile (Pyrococcus furiosus DSM 3638). We demonstrate how the evolution of transcriptional elements (promoters and terminators) generates new operons, restores the coordinated regulation of translocated, inverted, and newly acquired genes, and introduces completely novel regulation for even some of the most conserved operonic genes such as those encoding subunits of the ribosome. The inverse correlation (r = –0.92) between the proportion of operons with such internally located transcriptional elements and the fraction of conserved operons in each of the four archaea reveals an unprecedented view into varying stages of operon evolution. Importantly, our integrated analysis has revealed that organisms adapted to higher growth temperatures have lower tolerance for genome reorganization events that disrupt operon structures. PMID:21750103

  2. Parallelism in evolution of highly repetitive DNAs in sibling species.

    Science.gov (United States)

    Mravinac, Brankica; Plohl, Miroslav

    2010-08-01

    Characterization of heterochromatin in the flour beetle Tribolium audax revealed two highly repetitive DNA families, named TAUD1 and TAUD2, which together constitute almost 60% of the whole genome. Both families originated from a common ancestral approximately 110-bp repeating unit. Tandem arrangement of these elements in TAUD1 is typical for satellite DNAs, whereas TAUD2 represents a dispersed family based on 1412-bp complex higher-order repeats composed of inversely oriented approximately 110 bp units. Comparison with repetitive DNAs in the sibling species Tribolium madens showed similarities in nucleotide sequence and length of basic repeating units and also revealed structural and organizational parallelism in tandem and dispersed families assembled from these elements. In both Tribolium species, one tandem and one dispersed family build equivalent distribution patterns in the pericentromeric heterochromatin of all chromosomes including supernumeraries. Differences in the nucleotide sequence and in the complexity of higher-order structures between families of the same type suggest a scenario according to which rearranged variants of the corresponding ancestral families were formed and distributed in genomes during or after the speciation event, following the same principles independently in each descendant species. We assume that random effects of sequence dynamics should be constrained by organizational and structural features of repeating units and possible requirements for spatial distribution of particular sequence elements. An interspersed pattern of repetitive families also points to the intensive recombination events in heterochromatin. Synergy between the meiotic bouquet stage and satellite DNA sequence dynamics could make a positive feedback loop that promotes the observed genome-wide distribution. At the same time, considering the abundance of these DNAs in heterochromatin spanning the (peri)centromeric chromosomal segments, we speculate that diverged

  3. Parallel Evolution of Genes and Languages in the Caucasus Region

    Science.gov (United States)

    Balanovsky, Oleg; Dibirova, Khadizhat; Dybo, Anna; Mudrak, Oleg; Frolova, Svetlana; Pocheshkhova, Elvira; Haber, Marc; Platt, Daniel; Schurr, Theodore; Haak, Wolfgang; Kuznetsova, Marina; Radzhabov, Magomed; Balaganskaya, Olga; Romanov, Alexey; Zakharova, Tatiana; Soria Hernanz, David F.; Zalloua, Pierre; Koshel, Sergey; Ruhlen, Merritt; Renfrew, Colin; Wells, R. Spencer; Tyler-Smith, Chris; Balanovska, Elena

    2012-01-01

    We analyzed 40 SNP and 19 STR Y-chromosomal markers in a large sample of 1,525 indigenous individuals from 14 populations in the Caucasus and 254 additional individuals representing potential source populations. We also employed a lexicostatistical approach to reconstruct the history of the languages of the North Caucasian family spoken by the Caucasus populations. We found a different major haplogroup to be prevalent in each of four sets of populations that occupy distinct geographic regions and belong to different linguistic branches. The haplogroup frequencies correlated with geography and, even more strongly, with language. Within haplogroups, a number of haplotype clusters were shown to be specific to individual populations and languages. The data suggested a direct origin of Caucasus male lineages from the Near East, followed by high levels of isolation, differentiation and genetic drift in situ. Comparison of genetic and linguistic reconstructions covering the last few millennia showed striking correspondences between the topology and dates of the respective gene and language trees, and with documented historical events. Overall, in the Caucasus region, unmatched levels of gene-language co-evolution occurred within geographically isolated populations, probably due to its mountainous terrain. PMID:21571925

  4. Next Generation Asynchronous Adaptive Specialization for Data-Parallel Functional Array Processing in SAC: Accelerating the Availability of Specialized High Performance Code

    NARCIS (Netherlands)

    Grelck, C.; Wiesinger, H.; Plasmeijer, R.; Hinze, R.; Koopman, P.; Achten, P.

    2014-01-01

    Data-parallel processing of multi-dimensional functional/immutable arrays is characterized by a fundamental trade-off between software engineering principles on the one hand and runtime performance concerns on the other hand. Whereas the former demand code to be written in a generic style

  5. Pipelined Asynchronous Cache Design

    OpenAIRE

    Nyströem, Mika

    1997-01-01

    This thesis describes the development of pipelined asynchronous cache memories. The work is done in the context of the performance characteristics of memories and transistor logic of a late 1990's high-performance asynchronous microprocessor. We describe the general framework of asynchronous memory systems, caching, and those system characteristics that make caching of growing importance and keep it an interesting research topic. Finally, we present the main contribution of this work, whi...

  6. Academic training: From Evolution Theory to Parallel and Distributed Genetic Programming

    CERN Multimedia

    2007-01-01

    2006-2007 ACADEMIC TRAINING PROGRAMME LECTURE SERIES 15, 16 March From 11:00 to 12:00 - Main Auditorium, bldg. 500 From Evolution Theory to Parallel and Distributed Genetic Programming F. FERNANDEZ DE VEGA / Univ. of Extremadura, SP Lecture No. 1: From Evolution Theory to Evolutionary Computation Evolutionary computation is a subfield of artificial intelligence (more particularly computational intelligence) involving combinatorial optimization problems, which are based to some degree on the evolution of biological life in the natural world. In this tutorial we will review the source of inspiration for this metaheuristic and its capability for solving problems. We will show the main flavours within the field, and different problems that have been successfully solved employing this kind of techniques. Lecture No. 2: Parallel and Distributed Genetic Programming The successful application of Genetic Programming (GP, one of the available Evolutionary Algorithms) to optimization problems has encouraged an ...

  7. Parallel electrochemical treatment system and application for identifying acid-stable oxygen evolution electrocatalysts.

    Science.gov (United States)

    Jones, Ryan J R; Shinde, Aniketa; Guevarra, Dan; Xiang, Chengxiang; Haber, Joel A; Jin, Jian; Gregoire, John M

    2015-02-09

    Many energy technologies require electrochemical stability or preactivation of functional materials. Due to the long experiment duration required for either electrochemical preactivation or evaluation of operational stability, parallel screening is required to enable high throughput experimentation. Imposing operational electrochemical conditions to a library of materials in parallel creates several opportunities for experimental artifacts. We discuss the electrochemical engineering principles and operational parameters that mitigate artifacts in the parallel electrochemical treatment system. We also demonstrate the effects of resistive losses within the planar working electrode through a combination of finite element modeling and illustrative experiments. Operation of the parallel-plate, membrane-separated electrochemical treatment system is demonstrated by exposing a composition library of mixed-metal oxides to oxygen evolution conditions in 1 M sulfuric acid for 2 h. This application is particularly important because the electrolysis and photoelectrolysis of water are promising future energy technologies inhibited by the lack of highly active, acid-stable catalysts containing only earth abundant elements.

  8. Parallel evolution of auditory genes for echolocation in bats and toothed whales.

    Directory of Open Access Journals (Sweden)

    Yong-Yi Shen

    2012-06-01

    Full Text Available The ability of bats and toothed whales to echolocate is a remarkable case of convergent evolution. Previous genetic studies have documented parallel evolution of nucleotide sequences in Prestin and KCNQ4, both of which are associated with voltage motility during the cochlear amplification of signals. Echolocation involves complex mechanisms. The most important factors include cochlear amplification, nerve transmission, and signal re-coding. Herein, we screen three genes that play different roles in this auditory system. Cadherin 23 (Cdh23 and its ligand, protocadherin 15 (Pcdh15, are essential for bundling motility in the sensory hair. Otoferlin (Otof responds to nerve signal transmission in the auditory inner hair cell. Signals of parallel evolution occur in all three genes in the three groups of echolocators--two groups of bats (Yangochiroptera and Rhinolophoidea plus the dolphin. Significant signals of positive selection also occur in Cdh23 in the Rhinolophoidea and dolphin, and Pcdh15 in Yangochiroptera. In addition, adult echolocating bats have higher levels of Otof expression in the auditory cortex than do their embryos and non-echolocation bats. Cdh23 and Pcdh15 encode the upper and lower parts of tip-links, and both genes show signals of convergent evolution and positive selection in echolocators, implying that they may co-evolve to optimize cochlear amplification. Convergent evolution and expression patterns of Otof suggest the potential role of nerve and brain in echolocation. Our synthesis of gene sequence and gene expression analyses reveals that positive selection, parallel evolution, and perhaps co-evolution and gene expression affect multiple hearing genes that play different roles in audition, including voltage and bundle motility in cochlear amplification, nerve transmission, and brain function.

  9. Parallel evolution of auditory genes for echolocation in bats and toothed whales.

    Science.gov (United States)

    Shen, Yong-Yi; Liang, Lu; Li, Gui-Sheng; Murphy, Robert W; Zhang, Ya-Ping

    2012-06-01

    The ability of bats and toothed whales to echolocate is a remarkable case of convergent evolution. Previous genetic studies have documented parallel evolution of nucleotide sequences in Prestin and KCNQ4, both of which are associated with voltage motility during the cochlear amplification of signals. Echolocation involves complex mechanisms. The most important factors include cochlear amplification, nerve transmission, and signal re-coding. Herein, we screen three genes that play different roles in this auditory system. Cadherin 23 (Cdh23) and its ligand, protocadherin 15 (Pcdh15), are essential for bundling motility in the sensory hair. Otoferlin (Otof) responds to nerve signal transmission in the auditory inner hair cell. Signals of parallel evolution occur in all three genes in the three groups of echolocators--two groups of bats (Yangochiroptera and Rhinolophoidea) plus the dolphin. Significant signals of positive selection also occur in Cdh23 in the Rhinolophoidea and dolphin, and Pcdh15 in Yangochiroptera. In addition, adult echolocating bats have higher levels of Otof expression in the auditory cortex than do their embryos and non-echolocation bats. Cdh23 and Pcdh15 encode the upper and lower parts of tip-links, and both genes show signals of convergent evolution and positive selection in echolocators, implying that they may co-evolve to optimize cochlear amplification. Convergent evolution and expression patterns of Otof suggest the potential role of nerve and brain in echolocation. Our synthesis of gene sequence and gene expression analyses reveals that positive selection, parallel evolution, and perhaps co-evolution and gene expression affect multiple hearing genes that play different roles in audition, including voltage and bundle motility in cochlear amplification, nerve transmission, and brain function.

  10. Evolution Is an Experiment: Assessing Parallelism in Crop Domestication and Experimental Evolution: (Nei Lecture, SMBE 2014, Puerto Rico).

    Science.gov (United States)

    Gaut, Brandon S

    2015-07-01

    In this commentary, I make inferences about the level of repeatability and constraint in the evolutionary process, based on two sets of replicated experiments. The first experiment is crop domestication, which has been replicated across many different species. I focus on results of whole-genome scans for genes selected during domestication and ask whether genes are, in fact, selected in parallel across different domestication events. If genes are selected in parallel, it implies that the number of genetic solutions to the challenge of domestication is constrained. However, I find no evidence for parallel selection events either between species (maize vs. rice) or within species (two domestication events within beans). These results suggest that there are few constraints on genetic adaptation, but conclusions must be tempered by several complicating factors, particularly the lack of explicit design standards for selection screens. The second experiment involves the evolution of Escherichia coli to thermal stress. Unlike domestication, this highly replicated experiment detected a limited set of genes that appear prone to modification during adaptation to thermal stress. However, the number of potentially beneficial mutations within these genes is large, such that adaptation is constrained at the genic level but much less so at the nucleotide level. Based on these two experiments, I make the general conclusion that evolution is remarkably flexible, despite the presence of epistatic interactions that constrain evolutionary trajectories. I also posit that evolution is so rapid that we should establish a Speciation Prize, to be awarded to the first researcher who demonstrates speciation with a sexual organism in the laboratory. © The Author 2015. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  11. [Method of Entirely Parallel Differential Evolution for Model Adaptation in Systems Biology].

    Science.gov (United States)

    Kozlov, K N; Samsonov, A M; Samsonova, M G

    2015-01-01

    We developed a method of entirely parallel differential evolution for identification of unknown parameters of mathematical models by minimization of the objective function that describes the discrepancy of the model solution and the experimental data. The method is implemented in the free and open source software available on the Internet. The method demonstrated a good performance comparable to the top three methods from CEC-2014 and was successfully applied to several biological problems.

  12. A simple asynchronous replica-exchange implementation

    CERN Document Server

    Bussi, Giovanni

    2008-01-01

    We discuss the possibility of implementing asynchronous replica-exchange (or parallel tempering) molecular dynamics. In our scheme, the exchange attempts are driven by asynchronous messages sent by one of the computing nodes, so that different replicas are allowed to perform a different number of time-steps between subsequent attempts. The implementation is simple and based on the message-passing interface (MPI). We illustrate the advantages of our scheme with respect to the standard synchronous algorithm and we benchmark it for a model Lennard-Jones liquid on an IBM-LS21 blade center cluster.

  13. Pursuing Darwin’s curious parallel: Prospects for a science of cultural evolution

    Science.gov (United States)

    2017-01-01

    In the past few decades, scholars from several disciplines have pursued the curious parallel noted by Darwin between the genetic evolution of species and the cultural evolution of beliefs, skills, knowledge, languages, institutions, and other forms of socially transmitted information. Here, I review current progress in the pursuit of an evolutionary science of culture that is grounded in both biological and evolutionary theory, but also treats culture as more than a proximate mechanism that is directly controlled by genes. Both genetic and cultural evolution can be described as systems of inherited variation that change over time in response to processes such as selection, migration, and drift. Appropriate differences between genetic and cultural change are taken seriously, such as the possibility in the latter of nonrandomly guided variation or transformation, blending inheritance, and one-to-many transmission. The foundation of cultural evolution was laid in the late 20th century with population-genetic style models of cultural microevolution, and the use of phylogenetic methods to reconstruct cultural macroevolution. Since then, there have been major efforts to understand the sociocognitive mechanisms underlying cumulative cultural evolution, the consequences of demography on cultural evolution, the empirical validity of assumed social learning biases, the relative role of transformative and selective processes, and the use of quantitative phylogenetic and multilevel selection models to understand past and present dynamics of society-level change. I conclude by highlighting the interdisciplinary challenges of studying cultural evolution, including its relation to the traditional social sciences and humanities. PMID:28739929

  14. Pursuing Darwin's curious parallel: Prospects for a science of cultural evolution.

    Science.gov (United States)

    Mesoudi, Alex

    2017-07-24

    In the past few decades, scholars from several disciplines have pursued the curious parallel noted by Darwin between the genetic evolution of species and the cultural evolution of beliefs, skills, knowledge, languages, institutions, and other forms of socially transmitted information. Here, I review current progress in the pursuit of an evolutionary science of culture that is grounded in both biological and evolutionary theory, but also treats culture as more than a proximate mechanism that is directly controlled by genes. Both genetic and cultural evolution can be described as systems of inherited variation that change over time in response to processes such as selection, migration, and drift. Appropriate differences between genetic and cultural change are taken seriously, such as the possibility in the latter of nonrandomly guided variation or transformation, blending inheritance, and one-to-many transmission. The foundation of cultural evolution was laid in the late 20th century with population-genetic style models of cultural microevolution, and the use of phylogenetic methods to reconstruct cultural macroevolution. Since then, there have been major efforts to understand the sociocognitive mechanisms underlying cumulative cultural evolution, the consequences of demography on cultural evolution, the empirical validity of assumed social learning biases, the relative role of transformative and selective processes, and the use of quantitative phylogenetic and multilevel selection models to understand past and present dynamics of society-level change. I conclude by highlighting the interdisciplinary challenges of studying cultural evolution, including its relation to the traditional social sciences and humanities.

  15. A Block-Asynchronous Relaxation Method for Graphics Processing Units

    Energy Technology Data Exchange (ETDEWEB)

    Antz, Hartwig [Karlsruhe Inst. of Technology (KIT) (Germany); Tomov, Stanimire [Univ. of Tennessee, Knoxville, TN (United States); Dongarra, Jack [Univ. of Tennessee, Knoxville, TN (United States); Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Univ. of Manchester (United Kingdom); Heuveline, Vincent [Karlsruhe Inst. of Technology (KIT) (Germany)

    2011-11-30

    In this paper, we analyze the potential of asynchronous relaxation methods on Graphics Processing Units (GPUs). For this purpose, we developed a set of asynchronous iteration algorithms in CUDA and compared them with a parallel implementation of synchronous relaxation methods on CPU-based systems. For a set of test matrices taken from the University of Florida Matrix Collection we monitor the convergence behavior, the average iteration time and the total time-to-solution time. Analyzing the results, we observe that even for our most basic asynchronous relaxation scheme, despite its lower convergence rate compared to the Gauss-Seidel relaxation (that we expected), the asynchronous iteration running on GPUs is still able to provide solution approximations of certain accuracy in considerably shorter time then Gauss- Seidel running on CPUs. Hence, it overcompensates for the slower convergence by exploiting the scalability and the good fit of the asynchronous schemes for the highly parallel GPU architectures. Further, enhancing the most basic asynchronous approach with hybrid schemes – using multiple iterations within the ”subdomain” handled by a GPU thread block and Jacobi-like asynchronous updates across the ”boundaries”, subject to tuning various parameters – we manage to not only recover the loss of global convergence but often accelerate convergence of up to two times (compared to the effective but difficult to parallelize Gauss-Seidel type of schemes), while keeping the execution time of a global iteration practically the same. This shows the high potential of the asynchronous methods not only as a stand alone numerical solver for linear systems of equations fulfilling certain convergence conditions but more importantly as a smoother in multigrid methods. Due to the explosion of parallelism in todays architecture designs, the significance and the need for asynchronous methods, as the ones described in this work, is expected to grow.

  16. Multi-objective optimization of a parallel ankle rehabilitation robot using modified differential evolution algorithm

    Science.gov (United States)

    Wang, Congzhe; Fang, Yuefa; Guo, Sheng

    2015-07-01

    Dimensional synthesis is one of the most difficult issues in the field of parallel robots with actuation redundancy. To deal with the optimal design of a redundantly actuated parallel robot used for ankle rehabilitation, a methodology of dimensional synthesis based on multi-objective optimization is presented. First, the dimensional synthesis of the redundant parallel robot is formulated as a nonlinear constrained multi-objective optimization problem. Then four objective functions, separately reflecting occupied space, input/output transmission and torque performances, and multi-criteria constraints, such as dimension, interference and kinematics, are defined. In consideration of the passive exercise of plantar/dorsiflexion requiring large output moment, a torque index is proposed. To cope with the actuation redundancy of the parallel robot, a new output transmission index is defined as well. The multi-objective optimization problem is solved by using a modified Differential Evolution(DE) algorithm, which is characterized by new selection and mutation strategies. Meanwhile, a special penalty method is presented to tackle the multi-criteria constraints. Finally, numerical experiments for different optimization algorithms are implemented. The computation results show that the proposed indices of output transmission and torque, and constraint handling are effective for the redundant parallel robot; the modified DE algorithm is superior to the other tested algorithms, in terms of the ability of global search and the number of non-dominated solutions. The proposed methodology of multi-objective optimization can be also applied to the dimensional synthesis of other redundantly actuated parallel robots only with rotational movements.

  17. Operational Optimization of Large-Scale Parallel-Unit SWRO Desalination Plant Using Differential Evolution Algorithm

    Science.gov (United States)

    Wang, Xiaolong; Jiang, Aipeng; Jiangzhou, Shu; Li, Ping

    2014-01-01

    A large-scale parallel-unit seawater reverse osmosis desalination plant contains many reverse osmosis (RO) units. If the operating conditions change, these RO units will not work at the optimal design points which are computed before the plant is built. The operational optimization problem (OOP) of the plant is to find out a scheduling of operation to minimize the total running cost when the change happens. In this paper, the OOP is modelled as a mixed-integer nonlinear programming problem. A two-stage differential evolution algorithm is proposed to solve this OOP. Experimental results show that the proposed method is satisfactory in solution quality. PMID:24701180

  18. The genomics of selection in dogs and the parallel evolution between dogs and humans.

    Science.gov (United States)

    Wang, Guo-dong; Zhai, Weiwei; Yang, He-chuan; Fan, Ruo-xi; Cao, Xue; Zhong, Li; Wang, Lu; Liu, Fei; Wu, Hong; Cheng, Lu-guang; Poyarkov, Andrei D; Poyarkov, Nikolai A; Tang, Shu-sheng; Zhao, Wen-ming; Gao, Yun; Lv, Xue-mei; Irwin, David M; Savolainen, Peter; Wu, Chung-I; Zhang, Ya-ping

    2013-01-01

    The genetic bases of demographic changes and artificial selection underlying domestication are of great interest in evolutionary biology. Here we perform whole-genome sequencing of multiple grey wolves, Chinese indigenous dogs and dogs of diverse breeds. Demographic analysis show that the split between wolves and Chinese indigenous dogs occurred 32,000 years ago and that the subsequent bottlenecks were mild. Therefore, dogs may have been under human selection over a much longer time than previously concluded, based on molecular data, perhaps by initially scavenging with humans. Population genetic analysis identifies a list of genes under positive selection during domestication, which overlaps extensively with the corresponding list of positively selected genes in humans. Parallel evolution is most apparent in genes for digestion and metabolism, neurological process and cancer. Our study, for the first time, draws together humans and dogs in their recent genomic evolution.

  19. More than one way to evolve a weed: parallel evolution of U.S. weedy rice through independent genetic mechanisms

    Science.gov (United States)

    Many crop species were independently selected for a shared suite of “domestication traits,” which facilitates their use for studies of parallel evolution. Within domesticated rice (Oryza sativa), there has also been independent evolution of weedy strains from different cultivated varieties. This mak...

  20. Strategic flight assignment approach based on multi-objective parallel evolution algorithm with dynamic migration interval

    Directory of Open Access Journals (Sweden)

    Zhang Xuejun

    2015-04-01

    Full Text Available The continuous growth of air traffic has led to acute airspace congestion and severe delays, which threatens operation safety and cause enormous economic loss. Flight assignment is an economical and effective strategic plan to reduce the flight delay and airspace congestion by reasonably regulating the air traffic flow of China. However, it is a large-scale combinatorial optimization problem which is difficult to solve. In order to improve the quality of solutions, an effective multi-objective parallel evolution algorithm (MPEA framework with dynamic migration interval strategy is presented in this work. Firstly, multiple evolution populations are constructed to solve the problem simultaneously to enhance the optimization capability. Then a new strategy is proposed to dynamically change the migration interval among different evolution populations to improve the efficiency of the cooperation of populations. Finally, the cooperative co-evolution (CC algorithm combined with non-dominated sorting genetic algorithm II (NSGA-II is introduced for each population. Empirical studies using the real air traffic data of the Chinese air route network and daily flight plans show that our method outperforms the existing approaches, multi-objective genetic algorithm (MOGA, multi-objective evolutionary algorithm based on decomposition (MOEA/D, CC-based multi-objective algorithm (CCMA as well as other two MPEAs with different migration interval strategies.

  1. Chemodiversity in Selaginella: a reference system for parallel and convergent metabolic evolution in terrestrial plants

    Directory of Open Access Journals (Sweden)

    Jing-Ke eWeng

    2013-05-01

    Full Text Available Early plants began colonizing the terrestrial earth approximately 450 million years ago. Their success on land has been partially attributed to the evolution of specialized metabolic systems from core metabolic pathways, the former yielding structurally and functionally diverse chemicals to cope with a myriad of biotic and abiotic pressures. Over the past two decades, functional genomics, primarily focused on flowering plants, has begun cataloging the biosynthetic players underpinning assorted classes of plant specialized metabolites. However, the molecular mechanisms enriching specialized metabolic pathways during land plant evolution remain largely unexplored. Selaginella is an extant lycopodiophyte genus representative of an ancient lineage of tracheophytes. Notably, the lycopodiophytes diverged from euphyllophytes over 400 million years ago. The recent completion of the whole-genome sequence of an extant lycopodiophyte, Selaginella moellendorffii, provides new genomic and biochemical resources for studying metabolic evolution in vascular plants. 400 million years of independent evolution of lycopodiophytes and euphyllophytes resulted in numerous metabolic traits confined to each lineage. Surprisingly, a cadre of specialized metabolites, generally accepted to be restricted to seed plants, have been identified in Selaginella. Initial work suggested that Selaginella lacks obvious catalytic homologues known to be involved in the biosynthesis of well-studied specialized metabolites in seed plants. Therefore, these initial functional analyses suggest that the same chemical phenotypes arose independently more commonly than anticipated from our conventional understanding of divergent evolution of metabolism. Notably, the emergence of analogous and homologous catalytic machineries through convergent and parallel evolution, respectively, seems to have occurred repeatedly in different plant lineages.

  2. Design issues in the semantics and scheduling of asynchronous tasks.

    Energy Technology Data Exchange (ETDEWEB)

    Olivier, Stephen L.

    2013-07-01

    The asynchronous task model serves as a useful vehicle for shared memory parallel programming, particularly on multicore and manycore processors. As adoption of model among programmers has increased, support has emerged for the integration of task parallel language constructs into mainstream programming languages, e.g., C and C++. This paper examines some of the design decisions in Cilk and OpenMP concerning semantics and scheduling of asynchronous tasks with the aim of informing the efforts of committees considering language integration, as well as developers of new task parallel languages and libraries.

  3. Fusion of Asynchronous, Parallel, Unreliable Data Streams

    Science.gov (United States)

    2010-09-01

    their place of origin) at the place of displacement. Ration cards are used for basic provisions, such as rice, beans, cooking oil , detergent, tea...relatively minor and concentrated along a few dimensions not under rigid social control. Outlier detection methodology may well provide guides to aid the...salt, flour , petrol, and other fuel products. They can only be used in a specific shop or store in the person’s neighborhood. But local Ministry

  4. Gene loss and parallel evolution contribute to species difference in flower color.

    Science.gov (United States)

    Smith, Stacey D; Rausher, Mark D

    2011-10-01

    Although the importance of regulatory and functional sequence evolution in generating species differences has been studied to some extent, much less is known about the role of other types of genomic changes, such as fluctuation in gene copy number. Here, we apply analyses of gene function and expression of anthocyanin pigment pathway genes, as well as cosegregation analyses in backcross populations, to examine the genetic changes involved in the shift from blue to red flowers in Andean Iochroma (Solanaceae). We demonstrate that deletion of a gene coding for an anthocyanin pathway enzyme was necessary for the transition to red floral pigmentation. The downregulation of a second pathway gene was also necessary for the novel flower color, and this regulatory pattern parallels the genetic change in the two other red-flowered species in the sister family Convolvulaceae in which flower color change has been examined genetically. Finally, we document a shift in enzymatic function at a third locus, but the importance of this change in the transition to red flowers depends on the exact order with which the three changes occurred. This study shows that gene inactivation or loss can be involved in the origin of phenotypic differences between species, thereby restricting the possibility of reversion to the ancestral state. It also demonstrates that parallel evolution of red flowers in three different species occurs via a common developmental/regulatory change but by mutations in different genes.

  5. On The Influence of The Plane-parallel Approximation of Cloud Evolution

    Science.gov (United States)

    Dobbie, S.

    The differences in the radiative properties and heating rates between models employ- ing Monte Carlo (MC) and plane-parallel (PP) assumptions have been documented. In many cases, the differences can be appreciable. If the heating rates are slightly differ- ent, then over time does this substantially affect the evolution of the cloud layer such that the radiative properties and heating rates can be significantly different at a future time? In this work, we investigate these questions by incorporating a Monte Carlo radiation model into the UK LES cloud resolving model. This study will focus on cirrus clouds at a height of about 8-9km. We evolve two cases, one with an exact treatment of the horizontally finite and inhomogeneous clouds using MC, and another in which the radiation is treated using an independent pixel approximation (IPA) and plane parallel (PP) assumptions. The PP-IPA assumes that the cloud is homogeneous in each column and infinite in horizontal extent for the purposes of the radiation calculation. The cloud layers are evolved for 6 hours. Evolution of the cloud and its radiative properties will be studied and a comparison of the two cases will be presented.

  6. Parallel Evolution of Copy-Number Variation across Continents in Drosophila melanogaster

    Science.gov (United States)

    Schrider, Daniel R.; Hahn, Matthew W.; Begun, David J.

    2016-01-01

    Genetic differentiation across populations that is maintained in the presence of gene flow is a hallmark of spatially varying selection. In Drosophila melanogaster, the latitudinal clines across the eastern coasts of Australia and North America appear to be examples of this type of selection, with recent studies showing that a substantial portion of the D. melanogaster genome exhibits allele frequency differentiation with respect to latitude on both continents. As of yet there has been no genome-wide examination of differentiated copy-number variants (CNVs) in these geographic regions, despite their potential importance for phenotypic variation in Drosophila and other taxa. Here, we present an analysis of geographic variation in CNVs in D. melanogaster. We also present the first genomic analysis of geographic variation for copy-number variation in the sister species, D. simulans, in order to investigate patterns of parallel evolution in these close relatives. In D. melanogaster we find hundreds of CNVs, many of which show parallel patterns of geographic variation on both continents, lending support to the idea that they are influenced by spatially varying selection. These findings support the idea that polymorphic CNVs contribute to local adaptation in D. melanogaster. In contrast, we find very few CNVs in D. simulans that are geographically differentiated in parallel on both continents, consistent with earlier work suggesting that clinal patterns are weaker in this species. PMID:26809315

  7. Evolution of Kelvin-Helmholtz instability at Venus in the presence of the parallel magnetic field

    Energy Technology Data Exchange (ETDEWEB)

    Lu, H. Y. [Space Science Institute, School of Astronautics, Beihang University, Beijing 100191 (China); Key Laboratory of Planetary Sciences, Chinese Academy of Sciences, Nanjing 210008 (China); Cao, J. B.; Fu, H. S. [Space Science Institute, School of Astronautics, Beihang University, Beijing 100191 (China); Zhang, T. L. [Space Research Institute, Austrian Academy of Sciences, Graz A-8042 (Austria); Ge, Y. S. [Institute of Geology and Geophysics, Chinese Academy of Sciences, Beijing 100029 (China)

    2015-06-15

    Two-dimensional MHD simulations were performed to study the evolution of the Kelvin-Helmholtz (KH) instability at the Venusian ionopause in response to the strong flow shear in presence of the in-plane magnetic field parallel to the flow direction. The physical behavior of the KH instability as well as the triggering and occurrence conditions for highly rolled-up vortices are characterized through several physical parameters, including Alfvén Mach number on the upper side of the layer, the density ratio, and the ratio of parallel magnetic fields between two sides of the layer. Using these parameters, the simulations show that both the high density ratio and the parallel magnetic field component across the boundary layer play a role of stabilizing the instability. In the high density ratio case, the amount of total magnetic energy in the final quasi-steady status is much more than that in the initial status, which is clearly different from the case with low density ratio. We particularly investigate the nonlinear development of the case that has a high density ratio and uniform magnetic field. Before the instability saturation, a single magnetic island is formed and evolves into two quasi-steady islands in the non-linear phase. A quasi-steady pattern eventually forms and is embedded within a uniform magnetic field and a broadened boundary layer. The estimation of loss rates of ions from Venus indicates that the stabilizing effect of the parallel magnetic field component on the KH instability becomes strong in the case of high density ratio.

  8. Asynchronized synchronous machines

    CERN Document Server

    Botvinnik, M M

    1964-01-01

    Asynchronized Synchronous Machines focuses on the theoretical research on asynchronized synchronous (AS) machines, which are "hybrids” of synchronous and induction machines that can operate with slip. Topics covered in this book include the initial equations; vector diagram of an AS machine; regulation in cases of deviation from the law of full compensation; parameters of the excitation system; and schematic diagram of an excitation regulator. The possible applications of AS machines and its calculations in certain cases are also discussed. This publication is beneficial for students and indiv

  9. Asynchronous P300 BCI

    DEFF Research Database (Denmark)

    Panicker, Rajesh; Puthusserypady, Sadasivan; Sun, Ying

    2010-01-01

    An asynchronous hybrid brain-computer interface (BCI) system combining the P300 and steady-state visually evoked potentials (SSVEP) paradigms is introduced. A P300 base system is used for information transfer, and is augmented to include SSVEP for control state detection. The proposed system has...

  10. Parallel Evolution and Horizontal Gene Transfer of the pst Operon in Firmicutes from Oligotrophic Environments

    Directory of Open Access Journals (Sweden)

    Alejandra Moreno-Letelier

    2011-01-01

    Full Text Available The high affinity phosphate transport system (pst is crucial for phosphate uptake in oligotrophic environments. Cuatro Cienegas Basin (CCB has extremely low P levels and its endemic Bacillus are closely related to oligotrophic marine Firmicutes. Thus, we expected the pst operon of CCB to share the same evolutionary history and protein similarity to marine Firmicutes. Orthologs of the pst operon were searched in 55 genomes of Firmicutes and 13 outgroups. Phylogenetic reconstructions were performed for the pst operon and 14 concatenated housekeeping genes using maximum likelihood methods. Conserved domains and 3D structures of the phosphate-binding protein (PstS were also analyzed. The pst operon of Firmicutes shows two highly divergent clades with no correlation to the type of habitat nor a phylogenetic congruence, suggesting horizontal gene transfer. Despite sequence divergence, the PstS protein had a similar 3D structure, which could be due to parallel evolution after horizontal gene transfer events.

  11. Parallelism and Epistasis in Skeletal Evolution Identified through Use of Phylogenomic Mapping Strategies.

    Science.gov (United States)

    Daane, Jacob M; Rohner, Nicolas; Konstantinidis, Peter; Djuranovic, Sergej; Harris, Matthew P

    2016-01-01

    The identification of genetic mechanisms underlying evolutionary change is critical to our understanding of natural diversity, but is presently limited by the lack of genetic and genomic resources for most species. Here, we present a new comparative genomic approach that can be applied to a broad taxonomic sampling of nonmodel species to investigate the genetic basis of evolutionary change. Using our analysis pipeline, we show that duplication and divergence of fgfr1a is correlated with the reduction of scales within fishes of the genus Phoxinellus. As a parallel genetic mechanism is observed in scale-reduction within independent lineages of cypriniforms, our finding exposes significant developmental constraint guiding morphological evolution. In addition, we identified fixed variation in fgf20a within Phoxinellus and demonstrated that combinatorial loss-of-function of fgfr1a and fgf20a within zebrafish phenocopies the evolved scalation pattern. Together, these findings reveal epistatic interactions between fgfr1a and fgf20a as a developmental mechanism regulating skeletal variation among fishes. © The Author 2015. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  12. Silencing, positive selection and parallel evolution: busy history of primate cytochromes C.

    Directory of Open Access Journals (Sweden)

    Denis Pierron

    Full Text Available Cytochrome c (cyt c participates in two crucial cellular processes, energy production and apoptosis, and unsurprisingly is a highly conserved protein. However, previous studies have reported for the primate lineage (i loss of the paralogous testis isoform, (ii an acceleration and then a deceleration of the amino acid replacement rate of the cyt c somatic isoform, and (iii atypical biochemical behavior of human cyt c. To gain insight into the cause of these major evolutionary events, we have retraced the history of cyt c loci among primates. For testis cyt c, all primate sequences examined carry the same nonsense mutation, which suggests that silencing occurred before the primates diversified. For somatic cyt c, maximum parsimony, maximum likelihood, and Bayesian phylogenetic analyses yielded the same tree topology. The evolutionary analyses show that a fast accumulation of non-synonymous mutations (suggesting positive selection occurred specifically on the anthropoid lineage root and then continued in parallel on the early catarrhini and platyrrhini stems. Analysis of evolutionary changes using the 3D structure suggests they are focused on the respiratory chain rather than on apoptosis or other cyt c functions. In agreement with previous biochemical studies, our results suggest that silencing of the cyt c testis isoform could be linked with the decrease of primate reproduction rate. Finally, the evolution of cyt c in the two sister anthropoid groups leads us to propose that somatic cyt c evolution may be related both to COX evolution and to the convergent brain and body mass enlargement in these two anthropoid clades.

  13. Parallel evolution of TCP and B-class genes in Commelinaceae flower bilateral symmetry

    Directory of Open Access Journals (Sweden)

    Preston Jill C

    2012-03-01

    Full Text Available Abstract Background Flower bilateral symmetry (zygomorphy has evolved multiple times independently across angiosperms and is correlated with increased pollinator specialization and speciation rates. Functional and expression analyses in distantly related core eudicots and monocots implicate independent recruitment of class II TCP genes in the evolution of flower bilateral symmetry. Furthermore, available evidence suggests that monocot flower bilateral symmetry might also have evolved through changes in B-class homeotic MADS-box gene function. Methods In order to test the non-exclusive hypotheses that changes in TCP and B-class gene developmental function underlie flower symmetry evolution in the monocot family Commelinaceae, we compared expression patterns of teosinte branched1 (TB1-like, DEFICIENS (DEF-like, and GLOBOSA (GLO-like genes in morphologically distinct bilaterally symmetrical flowers of Commelina communis and Commelina dianthifolia, and radially symmetrical flowers of Tradescantia pallida. Results Expression data demonstrate that TB1-like genes are asymmetrically expressed in tepals of bilaterally symmetrical Commelina, but not radially symmetrical Tradescantia, flowers. Furthermore, DEF-like genes are expressed in showy inner tepals, staminodes and stamens of all three species, but not in the distinct outer tepal-like ventral inner tepals of C. communis. Conclusions Together with other studies, these data suggest parallel recruitment of TB1-like genes in the independent evolution of flower bilateral symmetry at early stages of Commelina flower development, and the later stage homeotic transformation of C. communis inner tepals into outer tepals through the loss of DEF-like gene expression.

  14. Existence test for asynchronous interval iterations

    DEFF Research Database (Denmark)

    Madsen, Kaj; Caprani, O.; Stauning, Ole

    1997-01-01

    In the search for regions that contain fixed points ofa real function of several variables, tests based on interval calculationscan be used to establish existence ornon-existence of fixed points in regions that are examined in the course ofthe search. The search can e.g. be performed...... as a synchronous (sequential) interval iteration:In each iteration step all components of the iterate are calculatedbased on the previous iterate. In this case it is straight forward to base simple interval existence and non-existencetests on the calculations done in each step of the iteration. The search can also...... be performed as an asynchronous (parallel) iteration: Only a few components are changed in each stepand this calculation is in general based on components from differentprevious iterates. For the asynchronous iteration it turns out thatsimple tests of existence and non-existence can be based...

  15. Multiparty Asynchronous Session Types

    DEFF Research Database (Denmark)

    Honda, Kohei; Yoshida, Nobuko; Carbone, Marco

    2016-01-01

    . This work extends the foregoing theories of binary session types to multiparty, asynchronous sessions, which often arise in practical communication-centered applications. Presented as a typed calculus for mobile processes, the theory introduces a new notion of types in which interactions involving multiple......Communication is a central elements in software development. As a potential typed foundation for structured communication-centered programming, session types have been studied over the past decade for a wide range of process calculi and programming languages, focusing on binary (two-party) sessions...... peers are directly abstracted as a global scenario. Global types retain the friendly type syntax of binary session types while specifying dependencies and capturing complex causal chains of multiparty asynchronous interactions. A global type plays the role of a shared agreement among communication peers...

  16. Evolution of Parallel Spindles Like genes in plants and highlight of unique domain architecture#

    Directory of Open Access Journals (Sweden)

    Consiglio Federica M

    2011-03-01

    Full Text Available Abstract Background Polyploidy has long been recognized as playing an important role in plant evolution. In flowering plants, the major route of polyploidization is suggested to be sexual through gametes with somatic chromosome number (2n. Parallel Spindle1 gene in Arabidopsis thaliana (AtPS1 was recently demonstrated to control spindle orientation in the 2nd division of meiosis and, when mutated, to induce 2n pollen. Interestingly, AtPS1 encodes a protein with a FHA domain and PINc domain putatively involved in RNA decay (i.e. Nonsense Mediated mRNA Decay. In potato, 2n pollen depending on parallel spindles was described long time ago but the responsible gene has never been isolated. The knowledge derived from AtPS1 as well as the availability of genome sequences makes it possible to isolate potato PSLike (PSL and to highlight the evolution of PSL family in plants. Results Our work leading to the first characterization of PSLs in potato showed a greater PSL complexity in this species respect to Arabidopsis thaliana. Indeed, a genomic PSL locus and seven cDNAs affected by alternative splicing have been cloned. In addition, the occurrence of at least two other PSL loci in potato was suggested by the sequence comparison of alternatively spliced transcripts. Phylogenetic analysis on 20 Viridaeplantae showed the wide distribution of PSLs throughout the species and the occurrence of multiple copies only in potato and soybean. The analysis of PSLFHA and PSLPINc domains evidenced that, in terms of secondary structure, a major degree of variability occurred in PINc domain respect to FHA. In terms of specific active sites, both domains showed diversification among plant species that could be related to a functional diversification among PSL genes. In addition, some specific active sites were strongly conserved among plants as supported by sequence alignment and by evidence of negative selection evaluated as difference between non-synonymous and

  17. PARALLEL EVOLUTION OF QUASI-SEPARATRIX LAYERS AND ACTIVE REGION UPFLOWS

    Energy Technology Data Exchange (ETDEWEB)

    Mandrini, C. H.; Cristiani, G. D.; Nuevo, F. A.; Vásquez, A. M. [Instituto de Astronomía y Física del Espacio (IAFE), UBA-CONICET, CC. 67, Suc. 28 Buenos Aires, 1428 (Argentina); Baker, D.; Driel-Gesztelyi, L. van [UCL-Mullard Space Science Laboratory, Holmbury St. Mary, Dorking, Surrey, RH5 6NT (United Kingdom); Démoulin, P.; Pick, M. [Observatoire de Paris, LESIA, UMR 8109 (CNRS), F-92195 Meudon Principal Cedex (France); Vargas Domínguez, S. [Observatorio Astronómico Nacional, Universidad Nacional de Colombia, Bogotá (Colombia)

    2015-08-10

    Persistent plasma upflows were observed with Hinode’s EUV Imaging Spectrometer (EIS) at the edges of active region (AR) 10978 as it crossed the solar disk. We analyze the evolution of the photospheric magnetic and velocity fields of the AR, model its coronal magnetic field, and compute the location of magnetic null-points and quasi-sepratrix layers (QSLs) searching for the origin of EIS upflows. Magnetic reconnection at the computed null points cannot explain all of the observed EIS upflow regions. However, EIS upflows and QSLs are found to evolve in parallel, both temporarily and spatially. Sections of two sets of QSLs, called outer and inner, are found associated to EIS upflow streams having different characteristics. The reconnection process in the outer QSLs is forced by a large-scale photospheric flow pattern, which is present in the AR for several days. We propose a scenario in which upflows are observed, provided that a large enough asymmetry in plasma pressure exists between the pre-reconnection loops and lasts as long as a photospheric forcing is at work. A similar mechanism operates in the inner QSLs; in this case, it is forced by the emergence and evolution of the bipoles between the two main AR polarities. Our findings provide strong support for the results from previous individual case studies investigating the role of magnetic reconnection at QSLs as the origin of the upflowing plasma. Furthermore, we propose that persistent reconnection along QSLs does not only drive the EIS upflows, but is also responsible for the continuous metric radio noise-storm observed in AR 10978 along its disk transit by the Nançay Radio Heliograph.

  18. A Binary Array Asynchronous Sorting Algorithm with Using Petri Nets

    Science.gov (United States)

    Voevoda, A. A.; Romannikov, D. O.

    2017-01-01

    Nowadays the tasks of computations speed-up and/or their optimization are actual. Among the approaches on how to solve these tasks, a method applying approaches of parallelization and asynchronization to a sorting algorithm is considered in the paper. The sorting methods are ones of elementary methods and they are used in a huge amount of different applications. In the paper, we offer a method of an array sorting that based on a division into a set of independent adjacent pairs of numbers and their parallel and asynchronous comparison. And this one distinguishes the offered method from the traditional sorting algorithms (like quick sorting, merge sorting, insertion sorting and others). The algorithm is implemented with the use of Petri nets, like the most suitable tool for an asynchronous systems description.

  19. Convergent evolution and parallelism in plant domestication revealed by an expanding archaeological record.

    Science.gov (United States)

    Fuller, Dorian Q; Denham, Tim; Arroyo-Kalin, Manuel; Lucas, Leilani; Stevens, Chris J; Qin, Ling; Allaby, Robin G; Purugganan, Michael D

    2014-04-29

    Recent increases in archaeobotanical evidence offer insights into the processes of plant domestication and agricultural origins, which evolved in parallel in several world regions. Many different crop species underwent convergent evolution and acquired domestication syndrome traits. For a growing number of seed crop species, these traits can be quantified by proxy from archaeological evidence, providing measures of the rates of change during domestication. Among domestication traits, nonshattering cereal ears evolved more quickly in general than seed size. Nevertheless, most domestication traits show similarly slow rates of phenotypic change over several centuries to millennia, and these rates were similar across different regions of origin. Crops reproduced vegetatively, including tubers and many fruit trees, are less easily documented in terms of morphological domestication, but multiple lines of evidence outline some patterns in the development of vegecultural systems across the New World and Old World tropics. Pathways to plant domestication can also be compared in terms of the cultural and economic factors occurring at the start of the process. Whereas agricultural societies have tended to converge on higher population densities and sedentism, in some instances cultivation began among sedentary hunter-gatherers whereas more often it was initiated by mobile societies of hunter-gatherers or herder-gatherers.

  20. Parallel evolution of Nitric Oxide signaling: Diversity of synthesis & memory pathways

    Science.gov (United States)

    Moroz, Leonid L.; Kohn, Andrea B.

    2014-01-01

    The origin of NO signaling can be traceable back to the origin of life with the large scale of parallel evolution of NO synthases (NOSs). Inducible-like NOSs may be the most basal prototype of all NOSs and that neuronal-like NOS might have evolved several times from this prototype. Other enzymatic and non-enzymatic pathways for NO synthesis have been discovered using reduction of nitrites, an alternative source of NO. Diverse synthetic mechanisms can co-exist within the same cell providing a complex NO-oxygen microenvironment tightly coupled with cellular energetics. The dissection of multiple sources of NO formation is crucial in analysis of complex biological processes such as neuronal integration and learning mechanisms when NO can act as a volume transmitter within memory-forming circuits. In particular, the molecular analysis of learning mechanisms (most notably in insects and gastropod molluscs) opens conceptually different perspectives to understand the logic of recruiting evolutionarily conserved pathways for novel functions. Giant uniquely identified cells from Aplysia and related species precent unuque opportunities for integrative analysis of NO signaling at the single cell level. PMID:21622160

  1. A software for parameter optimization with Differential Evolution Entirely Parallel method

    Directory of Open Access Journals (Sweden)

    Konstantin Kozlov

    2016-08-01

    Full Text Available Summary. Differential Evolution Entirely Parallel (DEEP package is a software for finding unknown real and integer parameters in dynamical models of biological processes by minimizing one or even several objective functions that measure the deviation of model solution from data. Numerical solutions provided by the most efficient global optimization methods are often problem-specific and cannot be easily adapted to other tasks. In contrast, DEEP allows a user to describe both mathematical model and objective function in any programming language, such as R, Octave or Python and others. Being implemented in C, DEEP demonstrates as good performance as the top three methods from CEC-2014 (Competition on evolutionary computation benchmark and was successfully applied to several biological problems. Availability. DEEP method is an open source and free software distributed under the terms of GPL licence version 3. The sources are available at http://deepmethod.sourceforge.net/ and binary packages for Fedora GNU/Linux are provided for RPM package manager at https://build.opensuse.org/project/repositories/home:mackoel:compbio.

  2. Study of a centrifugal pump, asynchronous motor and inverter, using ...

    African Journals Online (AJOL)

    ... concept to the study of a three-phase inverter, asynchronous motor and centrifugal pump. It presents the realization of the rectangular control using a micro controller (ATMEGA 168). The signals generated by the micro controller have been used to program the parallel port of a computer. By reading the recorded bits of the ...

  3. Pro asynchronous programming with .NET

    CERN Document Server

    Blewett, Richard; Ltd, Rock Solid Knowledge

    2014-01-01

    Pro Asynchronous Programming with .NET teaches the essential skill of asynchronous programming in .NET. It answers critical questions in .NET application development, such as: how do I keep my program responding at all times to keep my users happy how do I make the most of the available hardware how can I improve performanceIn the modern world, users expect more and more from their applications and devices, and multi-core hardware has the potential to provide it. But it takes carefully crafted code to turn that potential into responsive, scalable applications.With Pro Asynchronous Programming

  4. Asynchronous updating of threshold-coupled chaotic neurons

    Indian Academy of Sciences (India)

    Abstract. We study a network of chaotic model neurons incorporating threshold- activated coupling. We obtain a wide range of spatiotemporal patterns under varying degrees of asynchronicity in the evolution of the neuronal components. For instance, we find that sequential updating of threshold-coupled chaotic neurons ...

  5. Asynchronous updating of threshold-coupled chaotic neurons

    Indian Academy of Sciences (India)

    We study a network of chaotic model neurons incorporating threshold activated coupling. We obtain a wide range of spatiotemporal patterns under varying degrees of asynchronicity in the evolution of the neuronal components. For instance, we find that sequential updating of threshold-coupled chaotic neurons can yield ...

  6. Reducing energy with asynchronous circuits

    OpenAIRE

    Rivas Barragan, Daniel

    2012-01-01

    Reducing energy consumption using asynchronous circuits. The elastic clocks approach has been implemented along with a closed-feedback loop in order to achieve a lower energy consumption along with more reliability in integrated circuits.

  7. Totally Asynchronous Interference Channels

    CERN Document Server

    Moshksar, Kamyar

    2010-01-01

    This paper addresses an interference channel consisting of $\\mathbf{n}$ active users sharing $u$ frequency sub-bands. Users are asynchronous meaning there exists a mutual delay between their transmitted codes. A stationary model for interference is considered by assuming the starting point of an interferer's data is uniformly distributed along the codeword of any user. The spectrum is divided to private and common bands each containing $v_{\\mathrm{p}}$ and $v_{\\mathrm{c}}$ frequency sub-bands respectively. We consider a scenario where all transmitters are unaware of the number of active users and the channel gains. The optimum $v_{\\mathrm{p}}$ and $v_{\\mathrm{c}}$ are obtained such that the so-called outage capacity per user is maximized. If $\\Pr\\{\\mathbf{n}\\leq 2\\}=1$, upper and lower bounds on the mutual information between the input and output of the channel for each user are derived using a genie-aided technique. The proposed bounds meet each other as the code length grows to infinity yielding a closed ex...

  8. Parallel Genetic and Phenotypic Evolution of DNA Superhelicity in Experimental Populations of Escherichia coli

    DEFF Research Database (Denmark)

    Crozat, Estelle; Winkworth, Cynthia; Gaffé, Joël

    2010-01-01

    for 20,000 generations, parallel increases in DNA supercoiling were observed in ten populations. The genetic changes associated with the increased supercoiling were examined in one population, and beneficial mutations in the genes topA (encoding topoisomerase I) and fis (encoding a histone-like protein...... parallelism, with mutations concentrated in three genes (topA, fis, and dusB), although the populations had different alleles at each locus. Statistical analyses of these polymorphisms implied the action of positive selection and, moreover, suggested that fis and dusB, which belong to the same operon, have...... related functions. Indeed, we demonstrated that DusB regulates the expression of fis by both experimental and phylogenetic analyses. Second, molecular analyses of five mutations in fis and dusB affecting the transcription, translation, and protein activity of Fis also revealed strong parallelism...

  9. Toxin-Resistant Sodium Channels: Parallel Adaptive Evolution across a Complete Gene Family

    National Research Council Canada - National Science Library

    Jost, Manda Clair; Hillis, David M; Lu, Ying; Kyle, John W; Fozzard, Harry A; Zakon, Harold H

    2008-01-01

    Approximately 75% of vertebrate proteins belong to protein families encoded by multiple evolutionarily related genes, a pattern that emerged as a result of gene and genome duplications over the course of vertebrate evolution...

  10. Convergent Evolution of Hemoglobin Function in High-Altitude Andean Waterfowl Involves Limited Parallelism at the Molecular Sequence Level.

    Science.gov (United States)

    Natarajan, Chandrasekhar; Projecto-Garcia, Joana; Moriyama, Hideaki; Weber, Roy E; Muñoz-Fuentes, Violeta; Green, Andy J; Kopuchian, Cecilia; Tubaro, Pablo L; Alza, Luis; Bulgarella, Mariana; Smith, Matthew M; Wilson, Robert E; Fago, Angela; McCracken, Kevin G; Storz, Jay F

    2015-12-01

    A fundamental question in evolutionary genetics concerns the extent to which adaptive phenotypic convergence is attributable to convergent or parallel changes at the molecular sequence level. Here we report a comparative analysis of hemoglobin (Hb) function in eight phylogenetically replicated pairs of high- and low-altitude waterfowl taxa to test for convergence in the oxygenation properties of Hb, and to assess the extent to which convergence in biochemical phenotype is attributable to repeated amino acid replacements. Functional experiments on native Hb variants and protein engineering experiments based on site-directed mutagenesis revealed the phenotypic effects of specific amino acid replacements that were responsible for convergent increases in Hb-O2 affinity in multiple high-altitude taxa. In six of the eight taxon pairs, high-altitude taxa evolved derived increases in Hb-O2 affinity that were caused by a combination of unique replacements, parallel replacements (involving identical-by-state variants with independent mutational origins in different lineages), and collateral replacements (involving shared, identical-by-descent variants derived via introgressive hybridization). In genome scans of nucleotide differentiation involving high- and low-altitude populations of three separate species, function-altering amino acid polymorphisms in the globin genes emerged as highly significant outliers, providing independent evidence for adaptive divergence in Hb function. The experimental results demonstrate that convergent changes in protein function can occur through multiple historical paths, and can involve multiple possible mutations. Most cases of convergence in Hb function did not involve parallel substitutions and most parallel substitutions did not affect Hb-O2 affinity, indicating that the repeatability of phenotypic evolution does not require parallelism at the molecular level.

  11. Parallel evolution of a type IV secretion system in radiating lineages of the host-restricted bacterial pathogen Bartonella.

    Science.gov (United States)

    Engel, Philipp; Salzburger, Walter; Liesch, Marius; Chang, Chao-Chin; Maruyama, Soichi; Lanz, Christa; Calteau, Alexandra; Lajus, Aurélie; Médigue, Claudine; Schuster, Stephan C; Dehio, Christoph

    2011-02-10

    Adaptive radiation is the rapid origination of multiple species from a single ancestor as the result of concurrent adaptation to disparate environments. This fundamental evolutionary process is considered to be responsible for the genesis of a great portion of the diversity of life. Bacteria have evolved enormous biological diversity by exploiting an exceptional range of environments, yet diversification of bacteria via adaptive radiation has been documented in a few cases only and the underlying molecular mechanisms are largely unknown. Here we show a compelling example of adaptive radiation in pathogenic bacteria and reveal their genetic basis. Our evolutionary genomic analyses of the α-proteobacterial genus Bartonella uncover two parallel adaptive radiations within these host-restricted mammalian pathogens. We identify a horizontally-acquired protein secretion system, which has evolved to target specific bacterial effector proteins into host cells as the evolutionary key innovation triggering these parallel adaptive radiations. We show that the functional versatility and adaptive potential of the VirB type IV secretion system (T4SS), and thereby translocated Bartonella effector proteins (Beps), evolved in parallel in the two lineages prior to their radiations. Independent chromosomal fixation of the virB operon and consecutive rounds of lineage-specific bep gene duplications followed by their functional diversification characterize these parallel evolutionary trajectories. Whereas most Beps maintained their ancestral domain constitution, strikingly, a novel type of effector protein emerged convergently in both lineages. This resulted in similar arrays of host cell-targeted effector proteins in the two lineages of Bartonella as the basis of their independent radiation. The parallel molecular evolution of the VirB/Bep system displays a striking example of a key innovation involved in independent adaptive processes and the emergence of bacterial pathogens

  12. Parallel evolution of a type IV secretion system in radiating lineages of the host-restricted bacterial pathogen Bartonella.

    Directory of Open Access Journals (Sweden)

    Philipp Engel

    2011-02-01

    Full Text Available Adaptive radiation is the rapid origination of multiple species from a single ancestor as the result of concurrent adaptation to disparate environments. This fundamental evolutionary process is considered to be responsible for the genesis of a great portion of the diversity of life. Bacteria have evolved enormous biological diversity by exploiting an exceptional range of environments, yet diversification of bacteria via adaptive radiation has been documented in a few cases only and the underlying molecular mechanisms are largely unknown. Here we show a compelling example of adaptive radiation in pathogenic bacteria and reveal their genetic basis. Our evolutionary genomic analyses of the α-proteobacterial genus Bartonella uncover two parallel adaptive radiations within these host-restricted mammalian pathogens. We identify a horizontally-acquired protein secretion system, which has evolved to target specific bacterial effector proteins into host cells as the evolutionary key innovation triggering these parallel adaptive radiations. We show that the functional versatility and adaptive potential of the VirB type IV secretion system (T4SS, and thereby translocated Bartonella effector proteins (Beps, evolved in parallel in the two lineages prior to their radiations. Independent chromosomal fixation of the virB operon and consecutive rounds of lineage-specific bep gene duplications followed by their functional diversification characterize these parallel evolutionary trajectories. Whereas most Beps maintained their ancestral domain constitution, strikingly, a novel type of effector protein emerged convergently in both lineages. This resulted in similar arrays of host cell-targeted effector proteins in the two lineages of Bartonella as the basis of their independent radiation. The parallel molecular evolution of the VirB/Bep system displays a striking example of a key innovation involved in independent adaptive processes and the emergence of bacterial

  13. Evidence of gene orthology and trans-species polymorphism, but not of parallel evolution, despite high levels of concerted evolution in the major histocompatibility complex of flamingo species.

    Science.gov (United States)

    Gillingham, M A F; Courtiol, A; Teixeira, M; Galan, M; Bechet, A; Cezilly, F

    2016-02-01

    The major histocompatibility complex (MHC) is a cornerstone in the study of adaptive genetic diversity. Intriguingly, highly polymorphic MHC sequences are often not more similar within species than between closely related species. Divergent selection of gene duplicates, balancing selection maintaining trans-species polymorphism (TSP) that predate speciation and parallel evolution of species sharing similar selection pressures can all lead to higher sequence similarity between species. In contrast, high rates of concerted evolution increase sequence similarity of duplicated loci within species. Assessing these evolutionary models remains difficult as relatedness and ecological similarities are often confounded. As sympatric species of flamingos are more distantly related than allopatric species, flamingos represent an ideal model to disentangle these evolutionary models. We characterized MHC Class I exon 3, Class IIB exon 2 and exon 3 of the six extant flamingo species. We found up to six MHC Class I loci and two MHC Class IIB loci. As all six species shared the same number of MHC Class IIB loci, duplication appears to predate flamingo speciation. However, the high rate of concerted evolution has prevented the divergence of duplicated loci. We found high sequence similarity between all species regardless of codon position. The latter is consistent with balancing selection maintaining TSP, as under this mechanism amino acid sites under pathogen-mediated selection should be characterized by fewer synonymous codons (due to their common ancestry) than under parallel evolution. Overall, balancing selection maintaining TSP appears to result in high MHC similarity between species regardless of species relatedness and geographical distribution. © 2015 European Society For Evolutionary Biology. Journal of Evolutionary Biology © 2015 European Society For Evolutionary Biology.

  14. More than one way to evolve a weed: parallel evolution of US weedy rice through independent genetic mechanisms.

    Science.gov (United States)

    Qi, Xinshuai; Liu, Yan; Vigueira, Cynthia C; Young, Nelson D; Caicedo, Ana L; Jia, Yulin; Gealy, David R; Olsen, Kenneth M

    2015-07-01

    Many different crop species were selected for a common suite of 'domestication traits', which facilitates their use for studies of parallel evolution. Within domesticated rice (Oryza sativa), there has also been independent evolution of weedy strains from different cultivated varieties. This makes it possible to examine the genetic basis of parallel weed evolution and the extent to which this process occurs through shared genetic mechanisms. We performed comparative QTL mapping of weediness traits using two recombinant inbred line populations derived from crosses between an indica crop variety and representatives of each of the two independently evolved weed strains found in US rice fields, strawhull (S) and blackhull awned (B). Genotyping-by-sequencing provided dense marker coverage for linkage map construction (average marker interval <0.25 cM), with 6016 and 13 730 SNPs mapped in F5 lines of the S and B populations, respectively. For some weediness traits (awn length, hull pigmentation and pericarp pigmentation), QTL mapping and sequencing of underlying candidate genes confirmed that trait variation was largely attributable to individual loci. However, for more complex quantitative traits (including heading date, panicle length and seed shattering), we found multiple QTL, with little evidence of shared genetic bases between the S and B populations or across previous studies of weedy rice. Candidate gene sequencing revealed causal genetic bases for 8 of 27 total mapped QTL. Together these findings suggest that despite the genetic bottleneck that occurred during rice domestication, there is ample genetic variation in this crop to allow agricultural weed evolution through multiple genetic mechanisms. © 2015 John Wiley & Sons Ltd.

  15. Multi-granularity Parallel Computing in a Genome-Scale Molecular Evolution Application.

    Science.gov (United States)

    Walters, Jesse D; Bair, Thomas B; Braun, Terry A; Scheetz, Todd E; Robinson, John P; Casavant, Thomas L

    2009-01-01

    Previously [1], we reported a coarse-grained parallel computational approach to identifying rare molecular evolutionary events often referred to as horizontal gene transfers. Very high degrees of parallelism (up to 65x speedup on 4,096 processors) were reported, yet the overall execution time for a realistic problem size was still on the order of 12 days. With the availability of large numbers of compute clusters, as well as genomic sequence from more than 2,000 species containing as many as 35,000 genes each, and trillions of sequence nucleotides in all, we demonstrated the computational feasibility of a method to examine "clusters" of genes using phylogenetic tree similarity as a distance metric. A full serial solution to this problem requires years of CPU time, yet only makes modest IPC and memory demands; thus, it is an ideal candidate for a grid computing approach involving low-cost compute nodes. This paper now describes a multiple granularity parallelism solution that includes exploitation of multi-core shared memory nodes to address fine-grained aspects in the tree-clustering phase of our previous deployment of XenoCluster 1.0. In addition to benchmarking results that show up to 80% speedup efficiency on 8 CPU cores, we report on the biological accuracy and relevance of our results compared to a reported set of known xenologs in yeast.

  16. A biological cosmos of parallel universes: does protein structural plasticity facilitate evolution?

    Science.gov (United States)

    Meier, Sebastian; Ozbek, Suat

    2007-11-01

    While Darwin pictured organismal evolution as "descent with modification" more than 150 years ago, a detailed reconstruction of the basic evolutionary transitions at the molecular level is only emerging now. In particular, the evolution of today's protein structures and their concurrent functions has remained largely mysterious, as the destruction of these structures by mutation seems far easier than their construction. While the accumulation of genomic and structural data has indicated that proteins are related via common ancestors, naturally occurring protein structures are often considered to be evolutionarily robust, thus leaving open the question of how protein structures can be remodelled while selective pressure forces them to function. New information on the proteome, however, increasingly explains the nature of local and global conformational diversity in protein evolution, which allows the acquisition of novel functions via molecular transition forms containing ancestral and novel structures in dynamic equilibrium. Such structural plasticity may permit the evolution of new protein folds and help account for both the origins of new biological functions and the nature of molecular defects. (c) 2007 Wiley Periodicals, Inc.

  17. Molecular and morphological systematics of the Ellisellidae (Coelenterata: Octocorallia): parallel evolution in a globally distributed family of octocorals.

    Science.gov (United States)

    Bilewitch, Jaret P; Ekins, Merrick; Hooper, John; Degnan, Sandie M

    2014-04-01

    The octocorals of the Ellisellidae constitute a diverse and widely distributed family with subdivisions into genera based on colonial growth forms. Branching patterns are repeated in several genera and congeners often display region-specific variations in a given growth form. We examined the systematic patterns of ellisellid genera and the evolution of branching form diversity using molecular phylogenetic and ancestral morphological reconstructions. Six of eight included genera were found to be polyphyletic due to biogeographical incompatibility with current taxonomic assignments and the creation of at least six new genera plus several reassignments among existing genera is necessary. Phylogenetic patterns of diversification of colony branching morphology displayed a similar transformation order in each of the two primary ellisellid clades, with a sea fan form estimated as the most-probable common ancestor with likely origins in the Indo-Pacific region. The observed parallelism in evolution indicates the existence of a constraint on the genetic elements determining ellisellid colonial morphology. However, the lack of correspondence between levels of genetic divergence and morphological diversity among genera suggests that future octocoral studies should focus on the role of changes in gene regulation in the evolution of branching patterns. Copyright © 2014 Elsevier Inc. All rights reserved.

  18. Molecular and morphological systematics of the Ellisellidae (Coelenterata: Octocorallia): Parallel evolution in a globally distributed family of octocorals

    KAUST Repository

    Bilewitch, Jaret P.

    2014-04-01

    The octocorals of the Ellisellidae constitute a diverse and widely distributed family with subdivisions into genera based on colonial growth forms. Branching patterns are repeated in several genera and congeners often display region-specific variations in a given growth form. We examined the systematic patterns of ellisellid genera and the evolution of branching form diversity using molecular phylogenetic and ancestral morphological reconstructions. Six of eight included genera were found to be polyphyletic due to biogeographical incompatibility with current taxonomic assignments and the creation of at least six new genera plus several reassignments among existing genera is necessary. Phylogenetic patterns of diversification of colony branching morphology displayed a similar transformation order in each of the two primary ellisellid clades, with a sea fan form estimated as the most-probable common ancestor with likely origins in the Indo-Pacific region. The observed parallelism in evolution indicates the existence of a constraint on the genetic elements determining ellisellid colonial morphology. However, the lack of correspondence between levels of genetic divergence and morphological diversity among genera suggests that future octocoral studies should focus on the role of changes in gene regulation in the evolution of branching patterns. © 2014 Elsevier Inc.

  19. Transcriptomic imprints of adaptation to fresh water: parallel evolution of osmoregulatory gene expression in the Alewife

    Science.gov (United States)

    Velotta, Jonathan P.; Wegrzyn, Jill L.; Ginzburg, Samuel; Kang, Lin; Czesny, Sergiusz J.; O'Neill, Rachel J.; McCormick, Stephen; Michalak, Pawel; Schultz, Eric T.

    2017-01-01

    Comparative approaches in physiological genomics offer an opportunity to understand the functional importance of genes involved in niche exploitation. We used populations of Alewife (Alosa pseudoharengus) to explore the transcriptional mechanisms that underlie adaptation to fresh water. Ancestrally anadromous Alewives have recently formed multiple, independently derived, landlocked populations, which exhibit reduced tolerance of saltwater and enhanced tolerance of fresh water. Using RNA-seq, we compared transcriptional responses of an anadromous Alewife population to two landlocked populations after acclimation to fresh (0 ppt) and saltwater (35 ppt). Our results suggest that the gill transcriptome has evolved in primarily discordant ways between independent landlocked populations and their anadromous ancestor. By contrast, evolved shifts in the transcription of a small suite of well-characterized osmoregulatory genes exhibited a strong degree of parallelism. In particular, transcription of genes that regulate gill ion exchange has diverged in accordance with functional predictions: freshwater ion-uptake genes (most notably, the ‘freshwater paralog’ of Na+/K+-ATPase α-subunit) were more highly expressed in landlocked forms, whereas genes that regulate saltwater ion secretion (e.g. the ‘saltwater paralog’ of NKAα) exhibited a blunted response to saltwater. Parallel divergence of ion transport gene expression is associated with shifts in salinity tolerance limits among landlocked forms, suggesting that changes to the gill's transcriptional response to salinity facilitate freshwater adaptation.

  20. Parallelization in Modern C++

    CERN Multimedia

    CERN. Geneva

    2016-01-01

    The traditionally used and well established parallel programming models OpenMP and MPI are both targeting lower level parallelism and are meant to be as language agnostic as possible. For a long time, those models were the only widely available portable options for developing parallel C++ applications beyond using plain threads. This has strongly limited the optimization capabilities of compilers, has inhibited extensibility and genericity, and has restricted the use of those models together with other, modern higher level abstractions introduced by the C++11 and C++14 standards. The recent revival of interest in the industry and wider community for the C++ language has also spurred a remarkable amount of standardization proposals and technical specifications being developed. Those efforts however have so far failed to build a vision on how to seamlessly integrate various types of parallelism, such as iterative parallel execution, task-based parallelism, asynchronous many-task execution flows, continuation s...

  1. RAD-QTL Mapping Reveals Both Genome-Level Parallelism and Different Genetic Architecture Underlying the Evolution of Body Shape in Lake Whitefish (Coregonus clupeaformis) Species Pairs.

    Science.gov (United States)

    Laporte, Martin; Rogers, Sean M; Dion-Côté, Anne-Marie; Normandeau, Eric; Gagnaire, Pierre-Alexandre; Dalziel, Anne C; Chebib, Jobran; Bernatchez, Louis

    2015-05-21

    Parallel changes in body shape may evolve in response to similar environmental conditions, but whether such parallel phenotypic changes share a common genetic basis is still debated. The goal of this study was to assess whether parallel phenotypic changes could be explained by genetic parallelism, multiple genetic routes, or both. We first provide evidence for parallelism in fish shape by using geometric morphometrics among 300 fish representing five species pairs of Lake Whitefish. Using a genetic map comprising 3438 restriction site-associated DNA sequencing single-nucleotide polymorphisms, we then identified quantitative trait loci underlying body shape traits in a backcross family reared in the laboratory. A total of 138 body shape quantitative trait loci were identified in this cross, thus revealing a highly polygenic architecture of body shape in Lake Whitefish. Third, we tested for evidence of genetic parallelism among independent wild populations using both a single-locus method (outlier analysis) and a polygenic approach (analysis of covariation among markers). The single-locus approach provided limited evidence for genetic parallelism. However, the polygenic analysis revealed genetic parallelism for three of the five lakes, which differed from the two other lakes. These results provide evidence for both genetic parallelism and multiple genetic routes underlying parallel phenotypic evolution in fish shape among populations occupying similar ecological niches. Copyright © 2015 Laporte et al.

  2. Parallel and convergent evolution of the dim-light vision gene RH1 in bats (Order: Chiroptera.

    Directory of Open Access Journals (Sweden)

    Yong-Yi Shen

    Full Text Available Rhodopsin, encoded by the gene Rhodopsin (RH1, is extremely sensitive to light, and is responsible for dim-light vision. Bats are nocturnal mammals that inhabit poor light environments. Megabats (Old-World fruit bats generally have well-developed eyes, while microbats (insectivorous bats have developed echolocation and in general their eyes were degraded, however, dramatic differences in the eyes, and their reliance on vision, exist in this group. In this study, we examined the rod opsin gene (RH1, and compared its evolution to that of two cone opsin genes (SWS1 and M/LWS. While phylogenetic reconstruction with the cone opsin genes SWS1 and M/LWS generated a species tree in accord with expectations, the RH1 gene tree united Pteropodidae (Old-World fruit bats and Yangochiroptera, with very high bootstrap values, suggesting the possibility of convergent evolution. The hypothesis of convergent evolution was further supported when nonsynonymous sites or amino acid sequences were used to construct phylogenies. Reconstructed RH1 sequences at internal nodes of the bat species phylogeny showed that: (1 Old-World fruit bats share an amino acid change (S270G with the tomb bat; (2 Miniopterus share two amino acid changes (V104I, M183L with Rhinolophoidea; (3 the amino acid replacement I123V occurred independently on four branches, and the replacements L99M, L266V and I286V occurred each on two branches. The multiple parallel amino acid replacements that occurred in the evolution of bat RH1 suggest the possibility of multiple convergences of their ecological specialization (i.e., various photic environments during adaptation for the nocturnal lifestyle, and suggest that further attention is needed on the study of the ecology and behavior of bats.

  3. Parallel domestication, convergent evolution and duplicated gene recruitment in allopolyploid cotton.

    Science.gov (United States)

    Hovav, Ran; Chaudhary, Bhupendra; Udall, Joshua A; Flagel, Lex; Wendel, Jonathan F

    2008-07-01

    A putative advantage of allopolyploidy is the possibility of differential selection of duplicated (homeologous) genes originating from two different progenitor genomes. In this note we explore this hypothesis using a high throughput, SNP-specific microarray technology applied to seed trichomes (cotton) harvested from three developmental time points in wild and modern accessions of two independently domesticated cotton species, Gossypium hirsutum and G. barbadense. We show that homeolog expression ratios are dynamic both developmentally and over the several-thousand-year period encompassed by domestication and crop improvement, and that domestication increased the modulation of homeologous gene expression. In both species, D-genome expression was preferentially enhanced under human selection pressure, but for nonoverlapping sets of genes for the two independent domestication events. Our data suggest that human selection may have operated on different components of the fiber developmental genetic program in G. hirsutum and G. barbadense, leading to convergent rather than parallel genetic alterations and resulting morphology.

  4. Clinal Variation at Phenology-Related Genes in Spruce: Parallel Evolution in FTL2 and Gigantea?

    Science.gov (United States)

    Chen, Jun; Tsuda, Yoshiaki; Stocks, Michael; Källman, Thomas; Xu, Nannan; Kärkkäinen, Katri; Huotari, Tea; Semerikov, Vladimir L.; Vendramin, Giovanni G.; Lascoux, Martin

    2014-01-01

    Parallel clines in different species, or in different geographical regions of the same species, are an important source of information on the genetic basis of local adaptation. We recently detected latitudinal clines in SNPs frequencies and gene expression of candidate genes for growth cessation in Scandinavian populations of Norway spruce (Picea abies). Here we test whether the same clines are also present in Siberian spruce (P. obovata), a close relative of Norway spruce with a different Quaternary history. We sequenced nine candidate genes and 27 control loci and genotyped 14 SSR loci in six populations of P. obovata located along the Yenisei river from latitude 56°N to latitude 67°N. In contrast to Scandinavian Norway spruce that both departs from the standard neutral model (SNM) and shows a clear population structure, Siberian spruce populations along the Yenisei do not depart from the SNM and are genetically unstructured. Nonetheless, as in Norway spruce, growth cessation is significantly clinal. Polymorphisms in photoperiodic (FTL2) and circadian clock (Gigantea, GI, PRR3) genes also show significant clinal variation and/or evidence of local selection. In GI, one of the variants is the same as in Norway spruce. Finally, a strong cline in gene expression is observed for FTL2, but not for GI. These results, together with recent physiological studies, confirm the key role played by FTL2 and circadian clock genes in the control of growth cessation in spruce species and suggest the presence of parallel adaptation in these two species. PMID:24814465

  5. Fifty years of cytogenetics: a parallel view of the evolution of cytogenetics and genotoxicology.

    Science.gov (United States)

    Garcia-Sagredo, J M

    2008-01-01

    A parallelism exists between human cytogenetics and cytogenetic toxicology. The breakthroughs, mostly coming from and used in clinical genetics, are widely used in genetic toxicology. The birth of human cytogenetics occurred in 1956 when it was published that the diploid number of chromosomes in humans is 46. The first stage in chromosome-induced mutagenesis began in 1938 when Sax published the effects of X-rays on the chromosomes of Drosophila. In 1959, the cytogenetic anomalies for Down, Klinefelter, and Turner syndromes were described, and parallelly in 1960, the first publication on chromosomal aberrations in man caused by ionizing radiation appeared. The cytogenetic analysis of chromosomal aberrations in cell cultures is considered one of the primary methods to evaluate induced mutagenesis. At the end of the 1960s, banding techniques allowed chromosomes to be individually identified, in parallel, the sister chromatid exchange analysis technology was described. Another milestone in the history of induced mutagenesis was the discovery that mutagenic agents were able to alter chromosomal division and segregation in gonads inducing meiotic nondisjunction. Here we review new approaches and applications such as biological dosimetry, translocation scoring using FISH, and micronucleus test. Chromosomal aberrations and micronucleus test are now effective cytogenetic biomarkers of early effect used as cancer predictors. Human cytogenetics has proven to be effective over its 50-year lifespan and, although each new technique that has appeared seemed to announce its end, the fact is that the current state of cytogenetics is in reality a collection of techniques that, while common, are cheap, fast, and wide-ranging. Therefore, in genotoxicology, they continue to be useful to identify mutagenic agents as well as to evaluate and analyze exposed populations.

  6. Parallel and nonparallel behavioural evolution in response to parasitism and predation in Trinidadian guppies.

    Science.gov (United States)

    Jacquin, L; Reader, S M; Boniface, A; Mateluna, J; Patalas, I; Pérez-Jvostov, F; Hendry, A P

    2016-07-01

    Natural enemies such as predators and parasites are known to shape intraspecific variability of behaviour and personality in natural populations, yet several key questions remain: (i) What is the relative importance of predation vs. parasitism in shaping intraspecific variation of behaviour across generations? (ii) What are the contributions of genetic and plastic effects to this behavioural divergence? (iii) And to what extent are responses to predation and parasitism repeatable across independent evolutionary lineages? We addressed these questions using Trinidadian guppies (Poecilia reticulata) (i) varying in their exposure to dangerous fish predators and Gyrodactylus ectoparasites for (ii) both wild-caught F0 and laboratory-reared F2 individuals and coming from (iii) multiple independent evolutionary lineages (i.e. independent drainages). Several key findings emerged. First, a population's history of predation and parasitism influenced behavioural profiles, but to different extent depending on the behaviour considered (activity, shoaling or boldness). Second, we had evidence for some genetic effects of predation regime on behaviour, with differences in activity of F2 laboratory-reared individuals, but not for parasitism, which had only plastic effects on the boldness of wild-caught F0 individuals. Third, the two lineages showed a mixture of parallel and nonparallel responses to predation/parasitism, with parallel responses being stronger for predation than for parasitism and for activity and boldness than for shoaling. These findings suggest that different sets of behaviours provide different pay-offs in alternative predation/parasitism environments and that parasitism has more transient effects in shaping intraspecific variation of behaviour than does predation. © 2016 European Society For Evolutionary Biology. Journal of Evolutionary Biology © 2016 European Society For Evolutionary Biology.

  7. Evolution of symmetric reconnection layer in the presence of parallel shear flow

    Energy Technology Data Exchange (ETDEWEB)

    Lu Haoyu [Space Science Institute, School of Astronautics, Beihang University, Beijing 100191 (China); Sate Key Laboratory of Space Weather, Chinese Academy of Sciences, Beijing 100190 (China); Cao Jinbin [Space Science Institute, School of Astronautics, Beihang University, Beijing 100191 (China)

    2011-07-15

    The development of the structure of symmetric reconnection layer in the presence of a shear flow parallel to the antiparallel magnetic field component is studied by using a set of one-dimensional (1D) magnetohydrodynamic (MHD) equations. The Riemann problem is simulated through a second-order conservative TVD (total variation diminishing) scheme, in conjunction with Roe's averages for the Riemann problem. The simulation results indicate that besides the MHD shocks and expansion waves, there exist some new small-scale structures in the reconnection layer. For the case of zero initial guide magnetic field (i.e., B{sub y0} = 0), a pair of intermediate shock and slow shock (SS) is formed in the presence of the parallel shear flow. The critical velocity of initial shear flow V{sub zc} is just the Alfven velocity in the inflow region. As V{sub z{infinity}} increases to the value larger than V{sub zc}, a new slow expansion wave appears in the position of SS in the case V{sub z{infinity}} < V{sub zc}, and one of the current densities drops to zero. As plasma {beta} increases, the out-flow region is widened. For B{sub y0} {ne} 0, a pair of SSs and an additional pair of time-dependent intermediate shocks (TDISs) are found to be present. Similar to the case of B{sub y0} = 0, there exists a critical velocity of initial shear flow V{sub zc}. The value of V{sub zc} is, however, smaller than the Alfven velocity of the inflow region. As plasma {beta} increases, the velocities of SS and TDIS increase, and the out-flow region is widened. However, the velocity of downstream SS increases even faster, making the distance between SS and TDIS smaller. Consequently, the interaction between SS and TDIS in the case of high plasma {beta} influences the property of direction rotation of magnetic field across TDIS. Thereby, a wedge in the hodogram of tangential magnetic field comes into being. When {beta}{yields}{infinity}, TDISs disappear and the guide magnetic field becomes constant.

  8. Parallel evolution of the make–accumulate–consume strategy in Saccharomyces and Dekkera yeasts

    Science.gov (United States)

    Rozpędowska, Elżbieta; Hellborg, Linda; Ishchuk, Olena P.; Orhan, Furkan; Galafassi, Silvia; Merico, Annamaria; Woolfit, Megan; Compagno, Concetta; Piškur, Jure

    2011-01-01

    Saccharomyces yeasts degrade sugars to two-carbon components, in particular ethanol, even in the presence of excess oxygen. This characteristic is called the Crabtree effect and is the background for the 'make–accumulate–consume' life strategy, which in natural habitats helps Saccharomyces yeasts to out-compete other microorganisms. A global promoter rewiring in the Saccharomyces cerevisiae lineage, which occurred around 100 mya, was one of the main molecular events providing the background for evolution of this strategy. Here we show that the Dekkera bruxellensis lineage, which separated from the Saccharomyces yeasts more than 200 mya, also efficiently makes, accumulates and consumes ethanol and acetic acid. Analysis of promoter sequences indicates that both lineages independently underwent a massive loss of a specific cis-regulatory element from dozens of genes associated with respiration, and we show that also in D. bruxellensis this promoter rewiring contributes to the observed Crabtree effect. PMID:21556056

  9. Parallel evolution of the make-accumulate-consume strategy in Saccharomyces and Dekkera yeasts.

    Science.gov (United States)

    Rozpędowska, Elzbieta; Hellborg, Linda; Ishchuk, Olena P; Orhan, Furkan; Galafassi, Silvia; Merico, Annamaria; Woolfit, Megan; Compagno, Concetta; Piskur, Jure

    2011-01-01

    Saccharomyces yeasts degrade sugars to two-carbon components, in particular ethanol, even in the presence of excess oxygen. This characteristic is called the Crabtree effect and is the background for the 'make-accumulate-consume' life strategy, which in natural habitats helps Saccharomyces yeasts to out-compete other microorganisms. A global promoter rewiring in the Saccharomyces cerevisiae lineage, which occurred around 100 mya, was one of the main molecular events providing the background for evolution of this strategy. Here we show that the Dekkera bruxellensis lineage, which separated from the Saccharomyces yeasts more than 200 mya, also efficiently makes, accumulates and consumes ethanol and acetic acid. Analysis of promoter sequences indicates that both lineages independently underwent a massive loss of a specific cis-regulatory element from dozens of genes associated with respiration, and we show that also in D. bruxellensis this promoter rewiring contributes to the observed Crabtree effect.

  10. Parallel evolution of senescence in annual fishes in response to extrinsic mortality.

    Science.gov (United States)

    Tozzini, Eva Terzibasi; Dorn, Alexander; Ng'oma, Enoch; Polačik, Matej; Blažek, Radim; Reichwald, Kathrin; Petzold, Andreas; Watters, Brian; Reichard, Martin; Cellerino, Alessandro

    2013-04-03

    Early evolutionary theories of aging predict that populations which experience low extrinsic mortality evolve a retarded onset of senescence. Experimental support for this theory in vertebrates is scarce, in part for the difficulty of quantifying extrinsic mortality and its condition- and density-dependent components that -when considered- can lead to predictions markedly different to those of the "classical" theories. Here, we study annual fish of the genus Nothobranchius whose maximum lifespan is dictated by the duration of the water bodies they inhabit. Different populations of annual fish do not experience different strengths of extrinsic mortality throughout their life span, but are subject to differential timing (and predictability) of a sudden habitat cessation. In this respect, our study allows testing how aging evolves in natural environments when populations vary in the prospect of survival, but condition-dependent survival has a limited effect. We use 10 Nothobranchius populations from seasonal pools that differ in their duration to test how this parameter affects longevity and aging in two independent clades of these annual fishes. We found that replicated populations from a dry region showed markedly shorter captive lifespan than populations from a humid region. Shorter lifespan correlated with accelerated accumulation of lipofuscin (an established age marker) in both clades. Analysis of wild individuals confirmed that fish from drier habitats accumulate lipofuscin faster also under natural conditions. This indicates faster physiological deterioration in shorter-lived populations. Our data provide a strong quantitative example of how extrinsic mortality can shape evolution of senescence in a vertebrate clade. Nothobranchius is emerging as a genomic model species. The characterization of pairs of closely related species with different longevities should provide a powerful paradigm for the identification of genetic variations responsible for evolution of

  11. A Devonian tetrapod-like fish reveals substantial parallelism in stem tetrapod evolution.

    Science.gov (United States)

    Zhu, Min; Ahlberg, Per E; Zhao, Wen-Jin; Jia, Lian-Tao

    2017-10-01

    The fossils assigned to the tetrapod stem group document the evolution of terrestrial vertebrates from lobe-finned fishes. During the past 18 years the phylogenetic structure of this stem group has remained remarkably stable, even when accommodating new discoveries such as the earliest known stem tetrapod Tungsenia and the elpistostegid (fish-tetrapod intermediate) Tiktaalik. Here we present a large lobe-finned fish from the Late Devonian period of China that disrupts this stability. It combines characteristics of rhizodont fishes (supposedly a basal branch in the stem group, distant from tetrapods) with derived elpistostegid-like and tetrapod-like characters. This mélange of characters may reflect either detailed convergence between rhizodonts and elpistostegids plus tetrapods, under a phylogenetic scenario deduced from Bayesian inference analysis, or a previously unrecognized close relationship between these groups, as supported by maximum parsimony analysis. In either case, the overall result reveals a substantial increase in homoplasy in the tetrapod stem group. It also suggests that ecological diversity and biogeographical provinciality in the tetrapod stem group have been underestimated.

  12. Asynchronous control for networked systems

    CERN Document Server

    Rubio, Francisco; Bencomo, Sebastián

    2015-01-01

    This book sheds light on networked control systems; it describes different techniques for asynchronous control, moving away from the periodic actions of classical control, replacing them with state-based decisions and reducing the frequency with which communication between subsystems is required. The text focuses specially on event-based control. Split into two parts, Asynchronous Control for Networked Systems begins by addressing the problems of single-loop networked control systems, laying out various solutions which include two alternative model-based control schemes (anticipatory and predictive) and the use of H2/H∞ robust control to deal with network delays and packet losses. Results on self-triggering and send-on-delta sampling are presented to reduce the need for feedback in the loop. In Part II, the authors present solutions for distributed estimation and control. They deal first with reliable networks and then extend their results to scenarios in which delays and packet losses may occur. The novel ...

  13. Developing asynchronous online interprofessional education.

    Science.gov (United States)

    Sanborn, Heidi

    2016-09-01

    For many health programmes, developing interprofessional education (IPE) has been a challenge. Evidence on the best method for design and implementation of IPE has been slow to emerge, with little research on how to best incorporate IPE in the asynchronous online learning environment. This leaves online programmes with no clear guidance when embarking upon an initiative to integrate IPE into the curriculum. One tool that can be effective at guiding the incorporation of IPE across all learning platforms is the Interprofessional Education Collaborative (IPEC) competencies. A project was designed to integrate the nationally defined IPEC competencies throughout an asynchronous, online baccalaureate nursing completion programme. A programme-wide review led to targeted revision of course and unit-level objectives, learning experiences, and assessments based on the IPEC framework. As a result of this effort, the programme curriculum now provides interprofessional learning activities across all courses. This report provides a method for using the IPEC competencies to incorporate IPE within various asynchronous learning assessments, assuring students learn about, with, and from other professions.

  14. Adaptive parallel logic networks

    Science.gov (United States)

    Martinez, Tony R.; Vidal, Jacques J.

    1988-01-01

    Adaptive, self-organizing concurrent systems (ASOCS) that combine self-organization with massive parallelism for such applications as adaptive logic devices, robotics, process control, and system malfunction management, are presently discussed. In ASOCS, an adaptive network composed of many simple computing elements operating in combinational and asynchronous fashion is used and problems are specified by presenting if-then rules to the system in the form of Boolean conjunctions. During data processing, which is a different operational phase from adaptation, the network acts as a parallel hardware circuit.

  15. Parallel expression evolution of oxidative stress-related genes in fiber from wild and domesticated diploid and polyploid cotton (Gossypium).

    Science.gov (United States)

    Chaudhary, Bhupendra; Hovav, Ran; Flagel, Lex; Mittler, Ron; Wendel, Jonathan F

    2009-08-17

    Reactive oxygen species (ROS) play a prominent role in signal transduction and cellular homeostasis in plants. However, imbalances between generation and elimination of ROS can give rise to oxidative stress in growing cells. Because ROS are important to cell growth, ROS modulation could be responsive to natural or human-mediated selection pressure in plants. To study the evolution of oxidative stress related genes in a single plant cell, we conducted comparative expression profiling analyses of the elongated seed trichomes ("fibers") of cotton (Gossypium), using a phylogenetic approach. We measured expression changes during diploid progenitor species divergence, allopolyploid formation and parallel domestication of diploid and allopolyploid species, using a microarray platform that interrogates 42,429 unigenes. The distribution of differentially expressed genes in progenitor diploid species revealed significant up-regulation of ROS scavenging and potential signaling processes in domesticated G. arboreum. Similarly, in two independently domesticated allopolyploid species (G. barbadense and G. hirsutum) antioxidant genes were substantially up-regulated in comparison to antecedent wild forms. In contrast, analyses of three wild allopolyploid species indicate that genomic merger and ancient allopolyploid formation had no significant influences on regulation of ROS related genes. Remarkably, many of the ROS-related processes diagnosed as possible targets of selection were shared among diploid and allopolyploid cultigens, but involved different sets of antioxidant genes. Our data suggests that parallel human selection for enhanced fiber growth in several geographically widely dispersed species of domesticated cotton resulted in similar and overlapping metabolic transformations of the manner in which cellular redox levels have become modulated.

  16. Divergence across diet, time and populations rules out parallel evolution in the gut microbiomes of Trinidadian guppies.

    Science.gov (United States)

    Sullam, Karen E; Rubin, Benjamin E R; Dalton, Christopher M; Kilham, Susan S; Flecker, Alexander S; Russell, Jacob A

    2015-07-01

    Diverse microbial consortia profoundly influence animal biology, necessitating an understanding of microbiome variation in studies of animal adaptation. Yet, little is known about such variability among fish, in spite of their importance in aquatic ecosystems. The Trinidadian guppy, Poecilia reticulata, is an intriguing candidate to test microbiome-related hypotheses on the drivers and consequences of animal adaptation, given the recent parallel origins of a similar ecotype across streams. To assess the relationships between the microbiome and host adaptation, we used 16S rRNA amplicon sequencing to characterize gut bacteria of two guppy ecotypes with known divergence in diet, life history, physiology and morphology collected from low-predation (LP) and high-predation (HP) habitats in four Trinidadian streams. Guts were populated by several recurring, core bacteria that are related to other fish associates and rarely detected in the environment. Although gut communities of lab-reared guppies differed from those in the wild, microbiome divergence between ecotypes from the same stream was evident under identical rearing conditions, suggesting host genetic divergence can affect associations with gut bacteria. In the field, gut communities varied over time, across streams and between ecotypes in a stream-specific manner. This latter finding, along with PICRUSt predictions of metagenome function, argues against strong parallelism of the gut microbiome in association with LP ecotype evolution. Thus, bacteria cannot be invoked in facilitating the heightened reliance of LP guppies on lower-quality diets. We argue that the macroevolutionary microbiome convergence seen across animals with similar diets may be a signature of secondary microbial shifts arising some time after host-driven adaptation.

  17. Phase Space Invertible Asynchronous Cellular Automata

    Directory of Open Access Journals (Sweden)

    Simon Wacker

    2012-08-01

    Full Text Available While for synchronous deterministic cellular automata there is an accepted definition of reversibility, the situation is less clear for asynchronous cellular automata. We first discuss a few possibilities and then investigate what we call phase space invertible asynchronous cellular automata in more detail. We will show that for each Turing machine there is such a cellular automaton simulating it, and that it is decidable whether an asynchronous cellular automaton has this property or not, even in higher dimensions.

  18. The evolution of concepts of vestibular peripheral information processing: toward the dynamic, adaptive, parallel processing macular model

    Science.gov (United States)

    Ross, Muriel D.

    2003-01-01

    In a letter to Robert Hooke, written on 5 February, 1675, Isaac Newton wrote "If I have seen further than certain other men it is by standing upon the shoulders of giants." In his context, Newton was referring to the work of Galileo and Kepler, who preceded him. However, every field has its own giants, those men and women who went before us and, often with few tools at their disposal, uncovered the facts that enabled later researchers to advance knowledge in a particular area. This review traces the history of the evolution of views from early giants in the field of vestibular research to modern concepts of vestibular organ organization and function. Emphasis will be placed on the mammalian maculae as peripheral processors of linear accelerations acting on the head. This review shows that early, correct findings were sometimes unfortunately disregarded, impeding later investigations into the structure and function of the vestibular organs. The central themes are that the macular organs are highly complex, dynamic, adaptive, distributed parallel processors of information, and that historical references can help us to understand our own place in advancing knowledge about their complicated structure and functions.

  19. Crystal structure of RNase H3–substrate complex reveals parallel evolution of RNA/DNA hybrid recognition

    Science.gov (United States)

    Figiel, Małgorzata; Nowotny, Marcin

    2014-01-01

    RNases H participate in the replication and maintenance of genomic DNA. RNase H1 cleaves the RNA strand of RNA/DNA hybrids, and RNase H2 in addition hydrolyzes the RNA residue of RNA–DNA junctions. RNase H3 is structurally closely related to RNases H2, but its biochemical properties are similar to type 1 enzymes. Its unique N-terminal substrate-binding domain (N-domain) is related to TATA-binding protein. Here, we report the first crystal structure of RNase H3 in complex with its RNA/DNA substrate. Just like RNases H1, type 3 enzyme recognizes the 2′-OH groups of the RNA strand and detects the DNA strand by binding a phosphate group and inducing B-form conformation. Moreover, the N-domain recognizes RNA and DNA in a manner that is highly similar to the hybrid-binding domain of RNases H1. Our structure demonstrates a remarkable example of parallel evolution of the elements used in the specific recognition of RNA and DNA. PMID:25016521

  20. Osmotic/ionic status of body fluids in the euryhaline cephalopod suggest possible parallel evolution of osmoregulation.

    Science.gov (United States)

    Sakamoto, Tatsuya; Ogawa, Satoshi; Nishiyama, Yudai; Akada, Chiaki; Takahashi, Hideya; Watanabe, Taro; Minakata, Hiroyuki; Sakamoto, Hirotaka

    2015-09-25

    Acclimation from marine to dilute environments constitutes among the dramatic evolutionary transitions in the history of life. Such adaptations have evolved in multiple lineages, but studies of the blood/hemolymph homeostasis mechanisms are limited to those using evolutionarily advanced Deuterostome (chordates) and Ecdysozoa (crustaceans). Here, we examined hemolymph homeostasis in the advanced Lophotrochozoa/mollusc, the other unexplored taxa, and its possible regulation by the vasopressin/oxytocin superfamily peptides known to be implicated in fluid homeostasis in Chordata and Arthropoda. The hemolymph osmotic and ionic status in the euryhaline cephalopod (Octopus ocellatus) following transfer from 30-ppt normal seawater to 20 ppt salinity indicate hyperosmo- and hyperionoregulatory abilities for more than 1 week, as in crustaceans and teleost fish. While ventilation frequency decreased by 1 day, Na(+)/K(+)-ATPase activity, which has been generally implicated in ion transport, was induced in two of the eight posterior gills after 1 week. In addition, the octopuses were intravenously injected with 1 or 100 ng/g octopressin or cephalotocin, which are Octopus vasopressin/oxytocin orthologs. After 1 day, octopressin, but not cephalotocin, decreased the hemolymph osmolality and Ca concentrations, as well as urinary Na concentrations. These data provide evidence for possible parallel evolution in hyperionoregulatory mechanisms and coordination by conserved peptides.

  1. Parallel adaptive evolution of Atlantic cod on both sides of the Atlantic Ocean in response to temperature.

    Science.gov (United States)

    Bradbury, Ian R; Hubert, Sophie; Higgins, Brent; Borza, Tudor; Bowman, Sharen; Paterson, Ian G; Snelgrove, Paul V R; Morris, Corey J; Gregory, Robert S; Hardie, David C; Hutchings, Jeffrey A; Ruzzante, Daniel E; Taggart, Chris T; Bentzen, Paul

    2010-12-22

    Despite the enormous economic and ecological importance of marine organisms, the spatial scales of adaptation and biocomplexity remain largely unknown. Yet, the preservation of local stocks that possess adaptive diversity is critical to the long-term maintenance of productive stable fisheries and ecosystems. Here, we document genomic evidence of range-wide adaptive differentiation in a broadcast spawning marine fish, Atlantic cod (Gadus morhua), using a genome survey of single nucleotide polymorphisms. Of 1641 gene-associated polymorphisms examined, 70 (4.2%) tested positive for signatures of selection using a Bayesian approach. We identify a subset of these loci (n=40) for which allele frequencies show parallel temperature-associated clines (pAtlantic. Temperature associations were robust to the statistical removal of geographic distance or latitude effects, and contrasted 'neutral' loci, which displayed no temperature association. Allele frequencies at temperature-associated loci were significantly correlated, spanned three linkage groups and several were successfully annotated supporting the involvement of multiple independent genes. Our results are consistent with the evolution and/or selective sweep of multiple genes in response to ocean temperature, and support the possibility of a new conservation paradigm for non-model marine organisms based on genomic approaches to resolving functional and adaptive diversity.

  2. Distributed Computing for Signal Processing: Modeling of Asynchronous Parallel Computation.

    Science.gov (United States)

    1986-03-01

    Center() N 1 64 0.0377 Pstats() N 10.71 0.2462 NVote: I = Image border JI x I image); N =Number of PEt ;.SPIFAC number of times a section of the object...difficulty, all extra stage of switching elements is added to the Baseline network. . ...- (’ig 3 shows the Mkodified B~ase line network and m idi- cafes ...1itieerlier t he ,PPf ma ’coi t iore ir less spe-tamitzed A -nec-ir -it time- if the taks wailing for irocessing can be precisely pet -tic :𔃽--n run

  3. Genome Evolution and Meiotic Maps by Massively Parallel DNA Sequencing: Spotted Gar, an Outgroup for the Teleost Genome Duplication

    Science.gov (United States)

    Amores, Angel; Catchen, Julian; Ferrara, Allyse; Fontenot, Quenton; Postlethwait, John H.

    2011-01-01

    Genomic resources for hundreds of species of evolutionary, agricultural, economic, and medical importance are unavailable due to the expense of well-assembled genome sequences and difficulties with multigenerational studies. Teleost fish provide many models for human disease but possess anciently duplicated genomes that sometimes obfuscate connectivity. Genomic information representing a fish lineage that diverged before the teleost genome duplication (TGD) would provide an outgroup for exploring the mechanisms of evolution after whole-genome duplication. We exploited massively parallel DNA sequencing to develop meiotic maps with thrift and speed by genotyping F1 offspring of a single female and a single male spotted gar (Lepisosteus oculatus) collected directly from nature utilizing only polymorphisms existing in these two wild individuals. Using Stacks, software that automates the calling of genotypes from polymorphisms assayed by Illumina sequencing, we constructed a map containing 8406 markers. RNA-seq on two map-cross larvae provided a reference transcriptome that identified nearly 1000 mapped protein-coding markers and allowed genome-wide analysis of conserved synteny. Results showed that the gar lineage diverged from teleosts before the TGD and its genome is organized more similarly to that of humans than teleosts. Thus, spotted gar provides a critical link between medical models in teleost fish, to which gar is biologically similar, and humans, to which gar is genomically similar. Application of our F1 dense mapping strategy to species with no prior genome information promises to facilitate comparative genomics and provide a scaffold for ordering the numerous contigs arising from next generation genome sequencing. PMID:21828280

  4. Frog: Asynchronous Graph Processing on GPU with Hybrid Coloring Model

    Energy Technology Data Exchange (ETDEWEB)

    Shi, Xuanhua; Luo, Xuan; Liang, Junling; Zhao, Peng; Di, Sheng; He, Bingsheng; Jin, Hai

    2018-01-01

    GPUs have been increasingly used to accelerate graph processing for complicated computational problems regarding graph theory. Many parallel graph algorithms adopt the asynchronous computing model to accelerate the iterative convergence. Unfortunately, the consistent asynchronous computing requires locking or atomic operations, leading to significant penalties/overheads when implemented on GPUs. As such, coloring algorithm is adopted to separate the vertices with potential updating conflicts, guaranteeing the consistency/correctness of the parallel processing. Common coloring algorithms, however, may suffer from low parallelism because of a large number of colors generally required for processing a large-scale graph with billions of vertices. We propose a light-weight asynchronous processing framework called Frog with a preprocessing/hybrid coloring model. The fundamental idea is based on Pareto principle (or 80-20 rule) about coloring algorithms as we observed through masses of realworld graph coloring cases. We find that a majority of vertices (about 80%) are colored with only a few colors, such that they can be read and updated in a very high degree of parallelism without violating the sequential consistency. Accordingly, our solution separates the processing of the vertices based on the distribution of colors. In this work, we mainly answer three questions: (1) how to partition the vertices in a sparse graph with maximized parallelism, (2) how to process large-scale graphs that cannot fit into GPU memory, and (3) how to reduce the overhead of data transfers on PCIe while processing each partition. We conduct experiments on real-world data (Amazon, DBLP, YouTube, RoadNet-CA, WikiTalk and Twitter) to evaluate our approach and make comparisons with well-known non-preprocessed (such as Totem, Medusa, MapGraph and Gunrock) and preprocessed (Cusha) approaches, by testing four classical algorithms (BFS, PageRank, SSSP and CC). On all the tested applications and

  5. Burst-Mode Asynchronous Controllers on FPGA

    Directory of Open Access Journals (Sweden)

    Duarte L. Oliveira

    2008-01-01

    Full Text Available FPGAs have been mainly used to design synchronous circuits. Asynchronous design on FPGAs is difficult because the resulting circuit may suffer from hazard problems. We propose a method that implements a popular class of asynchronous circuits, known as burst mode, on FPGAs based on look-up table architectures. We present two conditions that, if satisfied, guarantee essential hazard-free implementation on any LUT-based FPGA. By doing that, besides all the intrinsic advantages of asynchronous over synchronous circuits, they also take advantage of the shorter design time and lower cost associated with FPGA designs.

  6. Exploring Asynchronous Many-Task Runtime Systems toward Extreme Scales

    Energy Technology Data Exchange (ETDEWEB)

    Knight, Samuel [O8953; Baker, Gavin Matthew; Gamell, Marc [Rutgers U; Hollman, David [08953; Sjaardema, Gregor [SNL; Kolla, Hemanth [SNL; Teranishi, Keita; Wilke, Jeremiah J; Slattengren, Nicole [SNL; Bennett, Janine Camille

    2015-10-01

    Major exascale computing reports indicate a number of software challenges to meet the dramatic change of system architectures in near future. While several-orders-of-magnitude increase in parallelism is the most commonly cited of those, hurdles also include performance heterogeneity of compute nodes across the system, increased imbalance between computational capacity and I/O capabilities, frequent system interrupts, and complex hardware architectures. Asynchronous task-parallel programming models show a great promise in addressing these issues, but are not yet fully understood nor developed su ciently for computational science and engineering application codes. We address these knowledge gaps through quantitative and qualitative exploration of leading candidate solutions in the context of engineering applications at Sandia. In this poster, we evaluate MiniAero code ported to three leading candidate programming models (Charm++, Legion and UINTAH) to examine the feasibility of these models that permits insertion of new programming model elements into an existing code base.

  7. Using Asynchronous Learning Technology To Make the Connections among Faculty, Students, and Teachers.

    Science.gov (United States)

    McMullen, David W.; Goldbaum, Howard; Wolffe, Robert J.; Sattler, Joan L.

    This paper traces the evolution and application of asynchronous teaching and learning tools at Bradley University (Illinois), emphasizing their use in teacher education. The paper details the utilization of e-mail, the World Wide Web, and CyberProf, highlighting collaborative projects that emphasize mentoring and professional development. In the…

  8. Gigabit Ethernet Asynchronous Clock Compensation FIFO

    Science.gov (United States)

    Duhachek, Jeff

    2012-01-01

    Clock compensation for Gigabit Ethernet is necessary because the clock recovered from the 1.25 Gb/s serial data stream has the potential to be 200 ppm slower or faster than the system clock. The serial data is converted to 10-bit parallel data at a 125 MHz rate on a clock recovered from the serial data stream. This recovered data needs to be processed by a system clock that is also running at a nominal rate of 125 MHz, but not synchronous to the recovered clock. To cross clock domains, an asynchronous FIFO (first-in-first-out) is used, with the write pointer (wprt) in the recovered clock domain and the read pointer (rptr) in the system clock domain. Because the clocks are generated from separate sources, there is potential for FIFO overflow or underflow. Clock compensation in Gigabit Ethernet is possible by taking advantage of the protocol data stream features. There are two distinct data streams that occur in Gigabit Ethernet where identical data is transmitted for a period of time. The first is configuration, which happens during auto-negotiation. The second is idle, which occurs at the end of auto-negotiation and between every packet. The identical data in the FIFO can be repeated by decrementing the read pointer, thus compensating for a FIFO that is draining too fast. The identical data in the FIFO can also be skipped by incrementing the read pointer, which compensates for a FIFO draining too slowly. The unique and novel features of this FIFO are that it works in both the idle stream and the configuration streams. The increment or decrement of the read pointer is different in the idle and compensation streams to preserve disparity. Another unique feature is that the read pointer to write pointer difference range changes between compensation and idle to minimize FIFO latency during packet transmission.

  9. Interpolation algorithm for asynchronous ADC-data

    Science.gov (United States)

    Bramburger, Stefan; Zinke, Benny; Killat, Dirk

    2017-09-01

    This paper presents a modified interpolation algorithm for signals with variable data rate from asynchronous ADCs. The Adaptive weights Conjugate gradient Toeplitz matrix (ACT) algorithm is extended to operate with a continuous data stream. An additional preprocessing of data with constant and linear sections and a weighted overlap of step-by-step into spectral domain transformed signals improve the reconstruction of the asycnhronous ADC signal. The interpolation method can be used if asynchronous ADC data is fed into synchronous digital signal processing.

  10. Multithreaded Asynchronous Graph Traversal for In-Memory and Semi-External Memory

    KAUST Repository

    Pearce, Roger

    2010-11-01

    Processing large graphs is becoming increasingly important for many domains such as social networks, bioinformatics, etc. Unfortunately, many algorithms and implementations do not scale with increasing graph sizes. As a result, researchers have attempted to meet the growing data demands using parallel and external memory techniques. We present a novel asynchronous approach to compute Breadth-First-Search (BFS), Single-Source-Shortest-Paths, and Connected Components for large graphs in shared memory. Our highly parallel asynchronous approach hides data latency due to both poor locality and delays in the underlying graph data storage. We present an experimental study applying our technique to both In-Memory and Semi-External Memory graphs utilizing multi-core processors and solid-state memory devices. Our experiments using synthetic and real-world datasets show that our asynchronous approach is able to overcome data latencies and provide significant speedup over alternative approaches. For example, on billion vertex graphs our asynchronous BFS scales up to 14x on 16-cores. © 2010 IEEE.

  11. Wireless Networks with Asynchronous Users

    CERN Document Server

    Moshksar, Kamyar

    2010-01-01

    This paper addresses an interference channel consisting of $\\mathbf{n}$ active users sharing $u$ frequency sub-bands. Users are asynchronous meaning there exists a mutual delay between their transmitted codes. A stationary model for interference is considered by assuming the starting point of an interferer's data is uniformly distributed along the codeword of any user. This model is not ergodic, however, we show that the noise plus interference process satisfies an Asymptotic Equipartition Property (AEP) under certain conditions. This enables us to define achievable rates in the conventional Shannon sense. The spectrum is divided to private and common bands. Each user occupies its assigned private band and the common band upon activation. In a scenario where all transmitters are unaware of the number of active users and the channel gains, the optimum spectrum assignment is obtained such that the so-called outage capacity per user is maximized. If $\\Pr\\{\\mathbf{n}>2\\}>0$, all users follow a locally Randomized ...

  12. Ultrascalable petaflop parallel supercomputer

    Science.gov (United States)

    Blumrich, Matthias A [Ridgefield, CT; Chen, Dong [Croton On Hudson, NY; Chiu, George [Cross River, NY; Cipolla, Thomas M [Katonah, NY; Coteus, Paul W [Yorktown Heights, NY; Gara, Alan G [Mount Kisco, NY; Giampapa, Mark E [Irvington, NY; Hall, Shawn [Pleasantville, NY; Haring, Rudolf A [Cortlandt Manor, NY; Heidelberger, Philip [Cortlandt Manor, NY; Kopcsay, Gerard V [Yorktown Heights, NY; Ohmacht, Martin [Yorktown Heights, NY; Salapura, Valentina [Chappaqua, NY; Sugavanam, Krishnan [Mahopac, NY; Takken, Todd [Brewster, NY

    2010-07-20

    A massively parallel supercomputer of petaOPS-scale includes node architectures based upon System-On-a-Chip technology, where each processing node comprises a single Application Specific Integrated Circuit (ASIC) having up to four processing elements. The ASIC nodes are interconnected by multiple independent networks that optimally maximize the throughput of packet communications between nodes with minimal latency. The multiple networks may include three high-speed networks for parallel algorithm message passing including a Torus, collective network, and a Global Asynchronous network that provides global barrier and notification functions. These multiple independent networks may be collaboratively or independently utilized according to the needs or phases of an algorithm for optimizing algorithm processing performance. The use of a DMA engine is provided to facilitate message passing among the nodes without the expenditure of processing resources at the node.

  13. Parallel evolution of the glycogen synthase 1 (muscle) gene Gys1 between Old World and New World fruit bats (Order: Chiroptera).

    Science.gov (United States)

    Fang, Lu; Shen, Bin; Irwin, David M; Zhang, Shuyi

    2014-10-01

    Glycogen synthase, which catalyzes the synthesis of glycogen, is especially important for Old World (Pteropodidae) and New World (Phyllostomidae) fruit bats that ingest high-carbohydrate diets. Glycogen synthase 1, encoded by the Gys1 gene, is the glycogen synthase isozyme that functions in muscles. To determine whether Gys1 has undergone adaptive evolution in bats with carbohydrate-rich diets, in comparison to insect-eating sister bat taxa, we sequenced the coding region of the Gys1 gene from 10 species of bats, including two Old World fruit bats (Pteropodidae) and a New World fruit bat (Phyllostomidae). Our results show no evidence for positive selection in the Gys1 coding sequence on the ancestral Old World and the New World Artibeus lituratus branches. Tests for convergent evolution indicated convergence of the sequences and one parallel amino acid substitution (T395A) was detected on these branches, which was likely driven by natural selection.

  14. Parallel Evolution under Chemotherapy Pressure in 29 Breast Cancer Cell Lines Results in Dissimilar Mechanisms of Resistance

    DEFF Research Database (Denmark)

    Tegze, Balint; Szallasi, Zoltan Imre; Haltrich, Iren

    2012-01-01

    a few parental cell lines. Methods: Parallel cell populations were initiated for two breast cancer cell lines (MDA-MB-231 and MCF-7) and these were treated independently for 18 months with doxorubicin or paclitaxel. IC50 values against 4 chemotherapy agents were determined to measure cross...

  15. Asynchronous replica exchange software for grid and heterogeneous computing

    Science.gov (United States)

    Gallicchio, Emilio; Xia, Junchao; Flynn, William F.; Zhang, Baofeng; Samlalsingh, Sade; Mentes, Ahmet; Levy, Ronald M.

    2015-11-01

    Parallel replica exchange sampling is an extended ensemble technique often used to accelerate the exploration of the conformational ensemble of atomistic molecular simulations of chemical systems. Inter-process communication and coordination requirements have historically discouraged the deployment of replica exchange on distributed and heterogeneous resources. Here we describe the architecture of a software (named ASyncRE) for performing asynchronous replica exchange molecular simulations on volunteered computing grids and heterogeneous high performance clusters. The asynchronous replica exchange algorithm on which the software is based avoids centralized synchronization steps and the need for direct communication between remote processes. It allows molecular dynamics threads to progress at different rates and enables parameter exchanges among arbitrary sets of replicas independently from other replicas. ASyncRE is written in Python following a modular design conducive to extensions to various replica exchange schemes and molecular dynamics engines. Applications of the software for the modeling of association equilibria of supramolecular and macromolecular complexes on BOINC campus computational grids and on the CPU/MIC heterogeneous hardware of the XSEDE Stampede supercomputer are illustrated. They show the ability of ASyncRE to utilize large grids of desktop computers running the Windows, MacOS, and/or Linux operating systems as well as collections of high performance heterogeneous hardware devices.

  16. Remote Asynchronous Message Service Gateway

    Science.gov (United States)

    Wang, Shin-Ywan; Burleigh, Scott C.

    2011-01-01

    The Remote Asynchronous Message Service (RAMS) gateway is a special-purpose AMS application node that enables exchange of AMS messages between nodes residing in different AMS "continua," notionally in different geographical locations. JPL s implementation of RAMS gateway functionality is integrated with the ION (Interplanetary Overlay Network) implementation of the DTN (Delay-Tolerant Networking) bundle protocol, and with JPL s implementation of AMS itself. RAMS protocol data units are encapsulated in ION bundles and are forwarded to the neighboring RAMS gateways identified in the source gateway s AMS management information base. Each RAMS gateway has interfaces in two communication environments: the AMS message space it serves, and the RAMS network - the grid or tree of mutually aware RAMS gateways - that enables AMS messages produced in one message space to be forwarded to other message spaces of the same venture. Each gateway opens persistent, private RAMS network communication channels to the RAMS gateways of other message spaces for the same venture, in other continua. The interconnected RAMS gateways use these communication channels to forward message petition assertions and cancellations among themselves. Each RAMS gateway subscribes locally to all subjects that are of interest in any of the linked message spaces. On receiving its copy of a message on any of these subjects, the RAMS gateway node uses the RAMS network to forward the message to every other RAMS gateway whose message space contains at least one node that has subscribed to messages on that subject. On receiving a message via the RAMS network from some other RAMS gateway, the RAMS gateway node forwards the message to all subscribers in its own message space.

  17. Synchronous and asynchronous detection of ultra-law light levels using CMOS-compatible semiconductor technologies

    OpenAIRE

    Lotto, Christian; Seitz, Peter; Charbon, Edoardo; Enz, Christian; Farine, Pierre-André

    2011-01-01

    This work presents significant improvements of noise performance in synchronous CMOS image sensors and in asynchronous energy-sensitive singlephoton X-ray imaging systems. A detailed analysis of synchronous CMOS low-noise image sensors using conventional architectures reveals room for potential noise performance improvements, namely noise in switched-capacitor column-parallel amplifiers as well as imperfections in the low-pass filtering properties provided by such switched-capacitor amplifier...

  18. Divergence across diet, time and populations rules out parallel evolution in the gut microbiomes of Trinidadian guppies

    OpenAIRE

    Sullam, Karen E.; Rubin, Benjamin ER; Dalton, Christopher M; Kilham, Susan S.; Flecker, Alexander S.; Russell, Jacob A.

    2015-01-01

    Diverse microbial consortia profoundly influence animal biology, necessitating an understanding of microbiome variation in studies of animal adaptation. Yet, little is known about such variability among fish, in spite of their importance in aquatic ecosystems. The Trinidadian guppy, Poecilia reticulata, is an intriguing candidate to test microbiome-related hypotheses on the drivers and consequences of animal adaptation, given the recent parallel origins of a similar ecotype across streams. To...

  19. Asynchronous Message Service Reference Implementation

    Science.gov (United States)

    Burleigh, Scott C.

    2011-01-01

    This software provides a library of middleware functions with a simple application programming interface, enabling implementation of distributed applications in conformance with the CCSDS AMS (Consultative Committee for Space Data Systems Asynchronous Message Service) specification. The AMS service, and its protocols, implement an architectural concept under which the modules of mission systems may be designed as if they were to operate in isolation, each one producing and consuming mission information without explicit awareness of which other modules are currently operating. Communication relationships among such modules are self-configuring; this tends to minimize complexity in the development and operations of modular data systems. A system built on this model is a society of generally autonomous, inter-operating modules that may fluctuate freely over time in response to changing mission objectives, modules functional upgrades, and recovery from individual module failure. The purpose of AMS, then, is to reduce mission cost and risk by providing standard, reusable infrastructure for the exchange of information among data system modules in a manner that is simple to use, highly automated, flexible, robust, scalable, and efficient. The implementation is designed to spawn multiple threads of AMS functionality under the control of an AMS application program. These threads enable all members of an AMS-based, distributed application to discover one another in real time, subscribe to messages on specific topics, and to publish messages on specific topics. The query/reply (client/server) communication model is also supported. Message exchange is optionally subject to encryption (to support confidentiality) and authorization. Fault tolerance measures in the discovery protocol minimize the likelihood of overall application failure due to any single operational error anywhere in the system. The multi-threaded design simplifies processing while enabling application nodes to

  20. The Notion of Historical "Parallelism" Revisited: Historical Evolution and Students' Conception of the Order Relation on the Number Line

    Science.gov (United States)

    Thomaidis, Yannis; Tzanakis, Constantinos

    2007-01-01

    This paper associates the findings of a historical study with those of an empirical one with 16 years-old students (1st year of the Greek Lyceum). It aims at examining critically the much-discussed and controversial relation between the historical evolution of mathematical concepts and the process of their teaching and learning. The paper deals…

  1. Handbook of asynchronous machines with variable speed

    CERN Document Server

    Razik, Hubert

    2013-01-01

    This handbook deals with the asynchronous machine in its close environment. It was born from a reflection on this electromagnetic converter whose integration in industrial environments takes a wide part. Previously this type of motor operated at fixed speed, from now on it has been integrated more and more in processes at variable speed. For this reason it seemed useful, or necessary, to write a handbook on the various aspects from the motor in itself, via the control and while finishing by the diagnosis aspect. Indeed, an asynchronous motor is used nowadays in industry where variation speed a

  2. Molecular Evidence for Convergence and Parallelism in Evolution of Complex Brains of Cephalopod Molluscs: Insights from Visual Systems.

    Science.gov (United States)

    Yoshida, M A; Ogura, A; Ikeo, K; Shigeno, S; Moritaki, T; Winters, G C; Kohn, A B; Moroz, L L

    2015-12-01

    Coleoid cephalopods show remarkable evolutionary convergence with vertebrates in their neural organization, including (1) eyes and visual system with optic lobes, (2) specialized parts of the brain controlling learning and memory, such as vertical lobes, and (3) unique vasculature supporting such complexity of the central nervous system. We performed deep sequencing of eye transcriptomes of pygmy squids (Idiosepius paradoxus) and chambered nautiluses (Nautilus pompilius) to decipher the molecular basis of convergent evolution in cephalopods. RNA-seq was complemented by in situ hybridization to localize the expression of selected genes. We found three types of genomic innovations in the evolution of complex brains: (1) recruitment of novel genes into morphogenetic pathways, (2) recombination of various coding and regulatory regions of different genes, often called "evolutionary tinkering" or "co-option", and (3) duplication and divergence of genes. Massive recruitment of novel genes occurred in the evolution of the "camera" eye from nautilus' "pinhole" eye. We also showed that the type-2 co-option of transcription factors played important roles in the evolution of the lens and visual neurons. In summary, the cephalopod convergent morphological evolution of the camera eyes was driven by a mosaic of all types of gene recruitments. In addition, our analysis revealed unexpected variations of squids' opsins, retinochromes, and arrestins, providing more detailed information, valuable for further research on intra-ocular and extra-ocular photoreception of the cephalopods. © The Author 2015. Published by Oxford University Press on behalf of the Society for Integrative and Comparative Biology. All rights reserved. For permissions please email: journals.permissions@oup.com.

  3. The STAPL Parallel Graph Library

    KAUST Repository

    Harshvardhan,

    2013-01-01

    This paper describes the stapl Parallel Graph Library, a high-level framework that abstracts the user from data-distribution and parallelism details and allows them to concentrate on parallel graph algorithm development. It includes a customizable distributed graph container and a collection of commonly used parallel graph algorithms. The library introduces pGraph pViews that separate algorithm design from the container implementation. It supports three graph processing algorithmic paradigms, level-synchronous, asynchronous and coarse-grained, and provides common graph algorithms based on them. Experimental results demonstrate improved scalability in performance and data size over existing graph libraries on more than 16,000 cores and on internet-scale graphs containing over 16 billion vertices and 250 billion edges. © Springer-Verlag Berlin Heidelberg 2013.

  4. Asynchronous stream processing with S-Net

    NARCIS (Netherlands)

    Grelck, C.; Scholz, S.-B.; Shafarenko, A.

    2010-01-01

    We present the rationale and design of S-Net, a coordination language for asynchronous stream processing. The language achieves a near-complete separation between the application code, written in any conventional programming language, and the coordination/communication code written in S-Net. Our

  5. Increasing Student Engagement Using Asynchronous Learning

    Science.gov (United States)

    Northey, Gavin; Bucic, Tania; Chylinski, Mathew; Govind, Rahul

    2015-01-01

    Student engagement is an ongoing concern for educators because of its positive association with deep learning and educational outcomes. This article tests the use of a social networking site (Facebook) as a tool to facilitate asynchronous learning opportunities that complement face-to-face interactions and thereby enable a stronger learning…

  6. Asynchronous versus Synchronous Learning in Pharmacy Education

    Science.gov (United States)

    Motycka, Carol A.; St. Onge, Erin L.; Williams, Jennifer

    2013-01-01

    Objective: To better understand the technology being used today in pharmacy education through a review of the current methodologies being employed at various institutions. Also, to discuss the benefits and difficulties of asynchronous and synchronous methodologies, which are being utilized at both traditional and distance education campuses.…

  7. Dynamic Performances of Asynchronous Machines | Ubeku ...

    African Journals Online (AJOL)

    The dynamic performance of electrical machines is affected by low and unbalanced voltages, frequency variations in its supply systems and pulsating load torques. In this paper the d-q axis model in the synchronous reference frame is used in the dynamic analysis on the performance of an asynchronous machine working ...

  8. Vortex particle method in parallel computations on graphical processing units used in study of the evolution of vortex structures

    Science.gov (United States)

    Kudela, Henryk; Kosior, Andrzej

    2014-12-01

    Understanding the dynamics and the mutual interaction among various types of vortical motions is a key ingredient in clarifying and controlling fluid motion. In the paper several different cases related to vortex tube interactions are presented. Due to problems with very long computation times on the single processor, the vortex-in-cell (VIC) method is implemented on the multicore architecture of a graphics processing unit (GPU). Numerical results of leapfrogging of two vortex rings for inviscid and viscous fluid are presented as test cases for the new multi-GPU implementation of the VIC method. Influence of the Reynolds number on the reconnection process is shown for two examples: antiparallel vortex tubes and orthogonally offset vortex tubes. Our aim is to show the great potential of the VIC method for solutions of three-dimensional flow problems and that the VIC method is very well suited for parallel computation.

  9. On Scalable Deep Learning and Parallelizing Gradient Descent

    CERN Document Server

    AUTHOR|(CDS)2129036; Möckel, Rico; Baranowski, Zbigniew; Canali, Luca

    Speeding up gradient based methods has been a subject of interest over the past years with many practical applications, especially with respect to Deep Learning. Despite the fact that many optimizations have been done on a hardware level, the convergence rate of very large models remains problematic. Therefore, data parallel methods next to mini-batch parallelism have been suggested to further decrease the training time of parameterized models using gradient based methods. Nevertheless, asynchronous optimization was considered too unstable for practical purposes due to a lacking understanding of the underlying mechanisms. Recently, a theoretical contribution has been made which defines asynchronous optimization in terms of (implicit) momentum due to the presence of a queuing model of gradients based on past parameterizations. This thesis mainly builds upon this work to construct a better understanding why asynchronous optimization shows proportionally more divergent behavior when the number of parallel worker...

  10. The parallel-antiparallel signal difference in double-wave-vector diffusion-weighted MR at short mixing times: a phase evolution perspective.

    Science.gov (United States)

    Finsterbusch, Jürgen

    2011-01-01

    Experiments with two diffusion weightings applied in direct succession in a single acquisition, so-called double- or two-wave-vector diffusion-weighting (DWV) experiments at short mixing times, have been shown to be a promising tool to estimate cell or compartment sizes, e.g. in living tissue. The basic theory for such experiments predicts that the signal decays for parallel and antiparallel wave vector orientations differ by a factor of three for small wave vectors. This seems to be surprising because in standard, single-wave-vector experiments the polarity of the diffusion weighting has no influence on the signal attenuation. Thus, the question how this difference can be understood more pictorially is often raised. In this rather educational manuscript, the phase evolution during a DWV experiment for simple geometries, e.g. diffusion between parallel, impermeable planes oriented perpendicular to the wave vectors, is considered step-by-step and demonstrates how the signal difference develops. Considering the populations of the phase distributions obtained, the factor of three between the signal decays which is predicted by the theory can be reproduced. Furthermore, the intermediate signal decay for orthogonal wave vector orientations can be derived when investigating diffusion in a box. Thus, the presented "phase gymnastics" approach may help to understand the signal modulation observed in DWV experiments at short mixing times. Copyright © 2010 Elsevier Inc. All rights reserved.

  11. A new species of Dexoris (Coleoptera: Lycidae) and parallel evolution of brachyptery in the soft-bodied elateroid beetles.

    Science.gov (United States)

    Bocak, Ladislav; Grebennikov, Vasily V; Masek, Michal

    2013-01-01

    Dexoris chome sp. nov. is described from South Pare mountains, Tanzania, based on a male specimen. This is the only Dexoris with shortened elytra, rudimentary hind wings and large, larviform abdomen. Unlike males of other species in the genus, D. chome sp. nov. has a modified number of palpomeres and remarkably short, robust legs and antennae. Such modifications are similar to those in the neotenic female of Omalisus fontisbellaquei Fourcroy, 1785 (Omalisidae), suggesting analogous morphological changes in unrelated lineages supposedly caused by similar modifications of their metamorphosis. The distribution of all 11 known species of African Dexoris closely overlap with the location of the hypothesized centres for evolution of new species in the Afrotropical region.

  12. The ecology of sexual conflict: ecologically dependent parallel evolution of male harm and female resistance in Drosophila melanogaster.

    Science.gov (United States)

    Arbuthnott, Devin; Dutton, Emily M; Agrawal, Aneil F; Rundle, Howard D

    2014-02-01

    The prevalence of sexual conflict in nature, along with the potentially stochastic nature of the resulting coevolutionary trajectories, makes it an important driver of phenotypic divergence and speciation that can operate even in the absence of environmental differences. The majority of empirical work investigating sexual conflict's role in population divergence/speciation has therefore been done in uniform environments and any role of ecology has largely been ignored. However, theory suggests that natural selection can constrain phenotypes influenced by sexual conflict. We use replicate populations of Drosophila melanogaster adapted to alternative environments to test how ecology influences the evolution of male effects on female longevity. The extent to which males reduce female longevity, as well as female resistance to such harm, both evolved in association with adaptation to the different environments. Our results demonstrate that ecology plays a central role in shaping patterns of population divergence in traits under sexual conflict. © 2013 John Wiley & Sons Ltd/CNRS.

  13. A novel role for Mc1r in the parallel evolution of depigmentation in independent populations of the cavefish Astyanax mexicanus.

    Directory of Open Access Journals (Sweden)

    Joshua B Gross

    2009-01-01

    Full Text Available The evolution of degenerate characteristics remains a poorly understood phenomenon. Only recently has the identification of mutations underlying regressive phenotypes become accessible through the use of genetic analyses. Focusing on the Mexican cave tetra Astyanax mexicanus, we describe, here, an analysis of the brown mutation, which was first described in the literature nearly 40 years ago. This phenotype causes reduced melanin content, decreased melanophore number, and brownish eyes in convergent cave forms of A. mexicanus. Crosses demonstrate non-complementation of the brown phenotype in F(2 individuals derived from two independent cave populations: Pachón and the linked Yerbaniz and Japonés caves, indicating the same locus is responsible for reduced pigmentation in these fish. While the brown mutant phenotype arose prior to the fixation of albinism in Pachón cave individuals, it is unclear whether the brown mutation arose before or after the fixation of albinism in the linked Yerbaniz/Japonés caves. Using a QTL approach combined with sequence and functional analyses, we have discovered that two distinct genetic alterations in the coding sequence of the gene Mc1r cause reduced pigmentation associated with the brown mutant phenotype in these caves. Our analysis identifies a novel role for Mc1r in the evolution of degenerative phenotypes in blind Mexican cavefish. Further, the brown phenotype has arisen independently in geographically separate caves, mediated through different mutations of the same gene. This example of parallelism indicates that certain genes are frequent targets of mutation in the repeated evolution of regressive phenotypes in cave-adapted species.

  14. Verification of Building Blocks for Asynchronous Circuits

    Directory of Open Access Journals (Sweden)

    Freek Verbeek

    2013-04-01

    Full Text Available Scalable formal verification constitutes an important challenge for the design of asynchronous circuits. Deadlock freedom is a property that is desired but hard to verify. It is an emergent property that has to be verified monolithically. We present our approach to using ACL2 to verify necessary and sufficient conditions over asynchronous delay-insensitive primitives. These conditions are used to derive SAT/SMT instances from circuits built out of these primitives. These SAT/SMT instances help in establishing absence of deadlocks. Our verification effort consists of building an executable checker in the ACL2 logic tailored for our purpose. We prove that this checker is correct. This approach enables us to prove ACL2 theorems involving defun-sk constructs and free variables fully automatically.

  15. Asynchronous Gossip for Averaging and Spectral Ranking

    Science.gov (United States)

    Borkar, Vivek S.; Makhijani, Rahul; Sundaresan, Rajesh

    2014-08-01

    We consider two variants of the classical gossip algorithm. The first variant is a version of asynchronous stochastic approximation. We highlight a fundamental difficulty associated with the classical asynchronous gossip scheme, viz., that it may not converge to a desired average, and suggest an alternative scheme based on reinforcement learning that has guaranteed convergence to the desired average. We then discuss a potential application to a wireless network setting with simultaneous link activation constraints. The second variant is a gossip algorithm for distributed computation of the Perron-Frobenius eigenvector of a nonnegative matrix. While the first variant draws upon a reinforcement learning algorithm for an average cost controlled Markov decision problem, the second variant draws upon a reinforcement learning algorithm for risk-sensitive control. We then discuss potential applications of the second variant to ranking schemes, reputation networks, and principal component analysis.

  16. Computing by Temporal Order: Asynchronous Cellular Automata

    Directory of Open Access Journals (Sweden)

    Michael Vielhaber

    2012-08-01

    Full Text Available Our concern is the behaviour of the elementary cellular automata with state set 0,1 over the cell set Z/nZ (one-dimensional finite wrap-around case, under all possible update rules (asynchronicity. Over the torus Z/nZ (n<= 11,we will see that the ECA with Wolfram rule 57 maps any v in F_2^n to any w in F_2^n, varying the update rule. We furthermore show that all even (element of the alternating group bijective functions on the set F_2^n = 0,...,2^n-1, can be computed by ECA57, by iterating it a sufficient number of times with varying update rules, at least for n <= 10. We characterize the non-bijective functions computable by asynchronous rules.

  17. Asynchronous Communication Scheme For Hypercube Computer

    Science.gov (United States)

    Madan, Herb S.

    1988-01-01

    Scheme devised for asynchronous-message communication system for Mark III hypercube concurrent-processor network. Network consists of up to 1,024 processing elements connected electrically as though were at corners of 10-dimensional cube. Each node contains two Motorola 68020 processors along with Motorola 68881 floating-point processor utilizing up to 4 megabytes of shared dynamic random-access memory. Scheme intended to support applications requiring passage of both polled or solicited and unsolicited messages.

  18. What is parallelism?

    Science.gov (United States)

    Scotland, Robert W

    2011-01-01

    Although parallel and convergent evolution are discussed extensively in technical articles and textbooks, their meaning can be overlapping, imprecise, and contradictory. The meaning of parallel evolution in much of the evolutionary literature grapples with two separate hypotheses in relation to phenotype and genotype, but often these two hypotheses have been inferred from only one hypothesis, and a number of subsidiary but problematic criteria, in relation to the phenotype. However, examples of parallel evolution of genetic traits that underpin or are at least associated with convergent phenotypes are now emerging. Four criteria for distinguishing parallelism from convergence are reviewed. All are found to be incompatible with any single proposition of homoplasy. Therefore, all homoplasy is equivalent to a broad view of convergence. Based on this concept, all phenotypic homoplasy can be described as convergence and all genotypic homoplasy as parallelism, which can be viewed as the equivalent concept of convergence for molecular data. Parallel changes of molecular traits may or may not be associated with convergent phenotypes but if so describe homoplasy at two biological levels-genotype and phenotype. Parallelism is not an alternative to convergence, but rather it entails homoplastic genetics that can be associated with and potentially explain, at the molecular level, how convergent phenotypes evolve. © 2011 Wiley Periodicals, Inc.

  19. Blending Online Asynchronous and Synchronous Learning

    Directory of Open Access Journals (Sweden)

    Lisa C. Yamagata-Lynch

    2014-04-01

    Full Text Available In this article I will share a qualitative self-study about a 15-week blended 100% online graduate level course facilitated through synchronous meetings on Blackboard Collaborate and asynchronous discussions on Blackboard. I taught the course at the University of Tennessee (UT during the spring 2012 semester and the course topic was online learning environments. The primary research question of this study was: How can the designer/instructor optimize learning experiences for students who are studying about online learning environments in a blended online course relying on both synchronous and asynchronous technologies? I relied on student reflections of course activities during the beginning, middle, and the end of the semester as the primary data source to obtain their insights regarding course experiences. Through the experiences involved in designing and teaching the course and engaging in this study I found that there is room in the instructional technology research community to address strategies for facilitating online synchronous learning that complement asynchronous learning. Synchronous online whole class meetings and well-structured small group meetings can help students feel a stronger sense of connection to their peers and instructor and stay engaged with course activities. In order to provide meaningful learning spaces in synchronous learning environments, the instructor/designer needs to balance the tension between embracing the flexibility that the online space affords to users and designing deliberate structures that will help them take advantage of the flexible space.

  20. Evolution Born of Moisture: Analogies and Parallels Between Anaximander's Ideas on Origin of Life and Man and Later Pre-Darwinian and Darwinian Evolutionary Concepts.

    Science.gov (United States)

    Kočandrle, Radim; Kleisner, Karel

    2013-01-01

    This study focuses on the origin of life as presented in the thought of Anaximander of Miletus but also points to some parallel motifs found in much later conceptions of both the pre-Darwinian German romantic science and post-Darwinian biology. According to Anaximander, life originated in the moisture associated with earth (mud). This moist environment hosted the first living creatures that later populated the dry land. In these descriptions, one can trace the earliest hints of the notion of environmental adaptation. The origin of humans was seen as connected in some way with fish: ancient humans were supposed to have developed inside fish-like animals. Anaximander took into account changes in the development of living creatures (adaptations) and speculated on the origins of humans. Similar ideas are found also in the writings of much later, eighteenth and nineteenth century authors who were close to the tradition of German romantic science. We do not argue that these later concepts are in any way directly linked with those of the pre-Socratics, but they show surprising parallels in, e.g., the hypothesis that life originated in a moist environment or the supposition that human developed from fish-like ancestors. These transformations are seen as a consequence of timeless logic rather than as evolution in historical terms. Despite the accent on the origin of living things, both Anaximander and the later Naturphilosophen lack in their notions the element most characteristic of Darwin's thought, that is, the emphasis on historicity and uniqueness of all that comes into being.

  1. Comparative Genomics Including the Early-Diverging Smut Fungus Ceraceosorus bombacis Reveals Signatures of Parallel Evolution within Plant and Animal Pathogens of Fungi and Oomycetes.

    Science.gov (United States)

    Sharma, Rahul; Xia, Xiaojuan; Riess, Kai; Bauer, Robert; Thines, Marco

    2015-08-27

    Ceraceosorus bombacis is an early-diverging lineage of smut fungi and a pathogen of cotton trees (Bombax ceiba). To study the evolutionary genomics of smut fungi in comparison with other fungal and oomycete pathogens, the genome of C. bombacis was sequenced and comparative genomic analyses were performed. The genome of 26.09 Mb encodes for 8,024 proteins, of which 576 are putative-secreted effector proteins (PSEPs). Orthology analysis revealed 30 ortholog PSEPs among six Ustilaginomycotina genomes, the largest groups of which are lytic enzymes, such as aspartic peptidase and glycoside hydrolase. Positive selection analyses revealed the highest percentage of positively selected PSEPs in C. bombacis compared with other Ustilaginomycotina genomes. Metabolic pathway analyses revealed the absence of genes encoding for nitrite and nitrate reductase in the genome of the human skin pathogen Malassezia globosa, but these enzymes are present in the sequenced plant pathogens in smut fungi. Interestingly, these genes are also absent in cultivable oomycete animal pathogens, while nitrate reductase has been lost in cultivable oomycete plant pathogens. Similar patterns were also observed for obligate biotrophic and hemi-biotrophic fungal and oomycete pathogens. Furthermore, it was found that both fungal and oomycete animal pathogen genomes are lacking cutinases and pectinesterases. Overall, these findings highlight the parallel evolution of certain genomic traits, revealing potential common evolutionary trajectories among fungal and oomycete pathogens, shaping the pathogen genomes according to their lifestyle. © The Author(s) 2015. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

  2. EPOS for Coordination of Asynchronous Sensor Webs Project

    Data.gov (United States)

    National Aeronautics and Space Administration — Develop, integrate, and deploy software-based tools to coordinate asynchronous, distributed missions and optimize observation planning spanning simultaneous...

  3. Genome evolution in an ancient bacteria-ant symbiosis: parallel gene loss among Blochmannia spanning the origin of the ant tribe Camponotini

    Directory of Open Access Journals (Sweden)

    Laura E. Williams

    2015-04-01

    Full Text Available Stable associations between bacterial endosymbionts and insect hosts provide opportunities to explore genome evolution in the context of established mutualisms and assess the roles of selection and genetic drift across host lineages and habitats. Blochmannia, obligate endosymbionts of ants of the tribe Camponotini, have coevolved with their ant hosts for ∼40 MY. To investigate early events in Blochmannia genome evolution across this ant host tribe, we sequenced Blochmannia from two divergent host lineages, Colobopsis obliquus and Polyrhachis turneri, and compared them with four published genomes from Blochmannia of Camponotus sensu stricto. Reconstructed gene content of the last common ancestor (LCA of these six Blochmannia genomes is reduced (690 protein coding genes, consistent with rapid gene loss soon after establishment of the symbiosis. Differential gene loss among Blochmannia lineages has affected cellular functions and metabolic pathways, including DNA replication and repair, vitamin biosynthesis and membrane proteins. Blochmannia of P. turneri (i.e., B. turneri encodes an intact DnaA chromosomal replication initiation protein, demonstrating that loss of dnaA was not essential for establishment of the symbiosis. Based on gene content, B. obliquus and B. turneri are unable to provision hosts with riboflavin. Of the six sequenced Blochmannia, B. obliquus is the earliest diverging lineage (i.e., the sister group of other Blochmannia sampled and encodes the fewest protein-coding genes and the most pseudogenes. We identified 55 genes involved in parallel gene loss, including glutamine synthetase, which may participate in nitrogen recycling. Pathways for biosynthesis of coenzyme A, terpenoids and riboflavin were lost in multiple lineages, suggesting relaxed selection on the pathway after inactivation of one component. Analysis of Illumina read datasets did not detect evidence of plasmids encoding missing functions, nor the presence of

  4. AP-IO: Asynchronous Pipeline I/O for Hiding Periodic Output Cost in CFD Simulation

    Directory of Open Access Journals (Sweden)

    Ren Xiaoguang

    2014-01-01

    Full Text Available Computational fluid dynamics (CFD simulation often needs to periodically output intermediate results to files in the form of snapshots for visualization or restart, which seriously impacts the performance. In this paper, we present asynchronous pipeline I/O (AP-IO optimization scheme for the periodically snapshot output on the basis of asynchronous I/O and CFD application characteristics. In AP-IO, dedicated background I/O processes or threads are in charge of handling the file write in pipeline mode, therefore the write overhead can be hidden with more calculation than classic asynchronous I/O. We design the framework of AP-IO and implement it in OpenFOAM, providing CFD users with a user-friendly interface. Experimental results on the Tianhe-2 supercomputer demonstrate that AP-IO can achieve a good optimization effect for the periodical snapshot output in CFD application, and the effect is especially better for massively parallel CFD simulations, which can reduce the total execution time up to about 40%.

  5. A Low-Power Asynchronous Step-Down DC-DC Converter for Implantable Devices.

    Science.gov (United States)

    Al-Terkawi Hasib, Omar; Sawan, M; Savaria, Y

    2011-06-01

    In this paper, we present a fully integrated asynchronous step-down switched capacitor dc-dc conversion structure suitable for supporting ultra-low-power circuits commonly found in biomedical implants. The proposed converter uses a fully digital asynchronous state machine as the heart of the control circuitry to generate the drive signals. To minimize the switching losses, the asynchronous controller scales the switching frequency of the drive signals according to the loading conditions. It also turns on additional parallel switches when needed and has a backup synchronous drive mode. This circuit regulates load voltages from 300 mV to 1.1 V derived from a 1.2-V input voltage. A total of 350 pF on-chip capacitance was implemented to support a maximum of 230-μ W load power, while providing efficiency up to 80%. The circuit validating the proposed concepts was fabricated in 0.13- μm complementary metal-oxide semiconductor technology. Experimental test results confirm the expected functionality and performance of the proposed circuit.

  6. Implementing e-Transactions with Asynchronous Replication

    OpenAIRE

    Frolund, Svend; Guerraoui, Rachid

    2000-01-01

    An e-Transaction is one that executes exactly-once despite failures. This paper describes a distributed protocol that implements the abstraction of e-Transactionsin three-tier architectures. Three-tier architectures are typically Internet-oriented architectures, where the end-user interacts with front-end clients (e.g., browsers) that invoke middle-tier application servers (e.g., web servers) to access back-end databases. We implement the e-Transaction abstraction using an asynchronous replic...

  7. Simulation of Dynamic Regimes in Asynchronous Traction Electric Drives of Locomotives

    Directory of Open Access Journals (Sweden)

    P. O. Seyidov

    2011-01-01

    Full Text Available The paper considers a dynamic model for locomotive electric drive with four asynchronous traction motors and their stator windings are serially connected. A mathematical model for motors being fed by one autonomous inverter has been developed in the paper. Serial connection makes it possible to increase a value of the total supply voltage. An analysis of the developed model shows that currents consumed by motors with their serial connection are lower in case of their parallel operation.  Direct and frequency start-up curves are given on the basis of the developed model.

  8. Two Studies Examining Argumentation in Asynchronous Computer Mediated Communication

    Science.gov (United States)

    Joiner, Richard; Jones, Sarah; Doherty, John

    2008-01-01

    Asynchronous computer mediated communication (CMC) would seem to be an ideal medium for supporting development in student argumentation. This paper investigates this assumption through two studies. The first study compared asynchronous CMC with face-to-face discussions. The transactional and strategic level of the argumentation (i.e. measures of…

  9. Considerations regarding asynchronous motor rotor parameters determination by FEM

    Directory of Open Access Journals (Sweden)

    Olivian Chiver

    2010-12-01

    Full Text Available The paper presents some considerations about asynchronous motor rotor parameters determination, using software based on finite elements method (FEM. For this, 2D magnetostatic and time harmonic analysis will be realized, at different frequencies, in case of a three phase asynchronous motor.

  10. Integrating Asynchronous Digital Design Into the Computer Engineering Curriculum

    Science.gov (United States)

    Smith, S. C.; Al-Assadi, W. K.; Di, J.

    2010-01-01

    As demand increases for circuits with higher performance, higher complexity, and decreased feature size, asynchronous (clockless) paradigms will become more widely used in the semiconductor industry, as evidenced by the International Technology Roadmap for Semiconductors' (ITRS) prediction of a likely shift from synchronous to asynchronous design…

  11. Designing Asynchronous Circuits for Low Power: An IFIR Filter

    DEFF Research Database (Denmark)

    Nielsen, Lars Skovby; Sparsø, Jens

    1999-01-01

    This paper addresses the design of asynchronous circuits for low power through an example: a filter bank for a digital hearing aid. The asynchronous design re-implements an existing synchronous circuit which is used in a commercial product. For comparison, both designs have been fabricated...

  12. Selective particle capture by asynchronously beating cilia

    Science.gov (United States)

    Ding, Yang; Kanso, Eva

    2015-12-01

    Selective particle filtration is fundamental in many engineering and biological systems. For example, many aquatic microorganisms use filter feeding to capture food particles from the surrounding fluid, using motile cilia. One of the capture strategies is to use the same cilia to generate feeding currents and to intercept particles when the particles are on the downstream side of the cilia. Here, we develop a 3D computational model of ciliary bands interacting with flow suspended particles and calculate particle trajectories for a range of particle sizes. Consistent with experimental observations, we find optimal particle sizes that maximize capture rate. The optimal size depends nonlinearly on cilia spacing and cilia coordination, synchronous vs. asynchronous. These parameters affect the cilia-generated flow field, which in turn affects particle trajectories. The low capture rate of smaller particles is due to the particles' inability to cross the flow streamlines of neighboring cilia. Meanwhile, large particles have difficulty entering the sub-ciliary region once advected downstream, also resulting in low capture rates. The optimal range of particle sizes is enhanced when cilia beat asynchronously. These findings have potentially important implications on the design and use of biomimetic cilia in processes such as particle sorting in microfluidic devices.

  13. Evolution

    Science.gov (United States)

    Peter, Ulmschneider

    When we are looking for intelligent life outside the Earth, there is a fundamental question: Assuming that life has formed on an extraterrestrial planet, will it also develop toward intelligence? As this is hotly debated, we will now describe the development of life on Earth in more detail in order to show that there are good reasons why evolution should culminate in intelligent beings.

  14. Parallel computations

    CERN Document Server

    1982-01-01

    Parallel Computations focuses on parallel computation, with emphasis on algorithms used in a variety of numerical and physical applications and for many different types of parallel computers. Topics covered range from vectorization of fast Fourier transforms (FFTs) and of the incomplete Cholesky conjugate gradient (ICCG) algorithm on the Cray-1 to calculation of table lookups and piecewise functions. Single tridiagonal linear systems and vectorized computation of reactive flow are also discussed.Comprised of 13 chapters, this volume begins by classifying parallel computers and describing techn

  15. Asynchronous machines. Direct torque control; Machines asynchrones. Commande par controle direct de couple

    Energy Technology Data Exchange (ETDEWEB)

    Fornel, B. de [Institut National Polytechnique, 31 - Toulouse (France)

    2006-05-15

    The asynchronous machine, with its low cost and robustness, is today the most widely used motor to make speed variators. However, its main drawback is that the same current generates both the magnetic flux and the torque, and thus any torque variation creates a flux variation. Such a coupling gives to the asynchronous machine a nonlinear behaviour which makes its control much more complex. The direct self control (DSC) method has been developed to improve the low efficiency of the scalar control method and for the specific railway drive application. The direct torque control (DTC) method is derived from the DSC method but corresponds to other type of applications. The DSC and DTC algorithms for asynchronous motors are presented in this article: 1 - direct control of the stator flux (DSC): principle, flux control, torque control, switching frequency of the inverter, speed estimation; 2 - direct torque control (DTC): principle, electromagnetic torque derivative, signals shape and switching frequency, some results, DTC speed variator without speed sensor, DTC application to multi-machine multi-converter systems; 3 - conclusion. (J.S.)

  16. Commande adaptive d'une machine asynchrone

    OpenAIRE

    Slama-Belkhodja, I.; De Fornel, B.

    1996-01-01

    Cat article décrit une stratégie de commande adaptive indirecte à Placement de Pôles (PP), appliquée à la commande en vitesse d'une machine asynchrone alimentée par un ensemble hacheur-filtre-onduleur de tension. L'algorithme des Moindres Carrés Récursifs (MCR) est utilisé pour l'identification des modèles de comportement type entrées/sorties. Un intérêt particulier est porté à la mise en oeuvre de cet algorithme et à la discussion de ses résultats, tenant compte des erreurs de modélisation e...

  17. Renewal Approach to the Analysis of the Asynchronous State for Coupled Noisy Oscillators

    CERN Document Server

    Farkhooi, Farzad

    2015-01-01

    We develop a framework in which the activity of nonlinear pulse-coupled oscillators is posed within the renewal theory. In this approach, the evolution of inter-event density allows for a self-consistent calculation that determines the asynchronous state and its stability. This framework, can readily be extended to the analysis of systems with more state variables. To exhibit this, we study a nonlinear pulse-coupled system, where couplings are dynamic and activity dependent. We investigate stability of this system and we show it undergoes a super-critical Hopf bifurcation to collective synchronization.

  18. Middleware for Processing Message Queues with Elasticity Support and Sequential Integrity of Asynchronous Message Processing

    Science.gov (United States)

    Henrique Teixeira, Eduardo; Patrícia Favacho de Araújo, Aletéia

    2015-10-01

    Elasticity in computing refers to dynamically adjusting the amount of allocated resources to process a distributed application. In order to achieve this, mechanisms are needed to avoid the phenomenon of the elasticity threshold detection moving constantly up or down. The existing work fails to deliver sequential integrity of asynchronous messages processing and the asymmetries of data distribution to achieve parallel consumption. This paper fills this gaps and proposes a middleware solution to dynamically analyze the flow of message queue, and a mechanism to increase the parallelized consumption based on the output behavior. An architecture for IOD (Increase On Demand) middleware is presented, with support for the increase and decrease of thread's to cope with the growth of message queues, using the technique of limit-based heuristics over a given period of time and grouping messages into sub-queues based on classification criteria.

  19. RUN DMC: An Efficient, Parallel Code for Analyzing Radial Velocity Observations Using N-body Integrations and Differential Evolution Markov Chain Monte Carlo

    Science.gov (United States)

    Nelson, Benjamin; Ford, Eric B.; Payne, Matthew J.

    2014-01-01

    In the 20+ years of Doppler observations of stars, scientists have uncovered a diverse population of extrasolar multi-planet systems. A common technique for characterizing the orbital elements of these planets is the Markov Chain Monte Carlo (MCMC), using a Keplerian model with random walk proposals and paired with the Metropolis-Hastings algorithm. For approximately a couple of dozen planetary systems with Doppler observations, there are strong planet-planet interactions due to the system being in or near a mean-motion resonance (MMR). An N-body model is often required to accurately describe these systems. Further computational difficulties arise from exploring a high-dimensional parameter space (~7 × number of planets) that can have complex parameter correlations, particularly for systems near a MMR. To surmount these challenges, we introduce a differential evolution MCMC (DEMCMC) algorithm applied to radial velocity data while incorporating self-consistent N-body integrations. Our Radial velocity Using N-body DEMCMC (RUN DMC) algorithm improves upon the random walk proposal distribution of the traditional MCMC by using an ensemble of Markov chains to adaptively improve the proposal distribution. RUN DMC can sample more efficiently from high-dimensional parameter spaces that have strong correlations between model parameters. We describe the methodology behind the algorithm, along with results of tests for accuracy and performance. We find that most algorithm parameters have a modest effect on the rate of convergence. However, the size of the ensemble can have a strong effect on performance. We show that the optimal choice depends on the number of planets in a system, as well as the computer architecture used and the resulting extent of parallelization. While the exact choices of optimal algorithm parameters will inevitably vary due to the details of individual planetary systems (e.g., number of planets, number of observations, orbital periods, and signal

  20. Professional Parallel Programming with C# Master Parallel Extensions with NET 4

    CERN Document Server

    Hillar, Gastón

    2010-01-01

    Expert guidance for those programming today's dual-core processors PCs As PC processors explode from one or two to now eight processors, there is an urgent need for programmers to master concurrent programming. This book dives deep into the latest technologies available to programmers for creating professional parallel applications using C#, .NET 4, and Visual Studio 2010. The book covers task-based programming, coordination data structures, PLINQ, thread pools, asynchronous programming model, and more. It also teaches other parallel programming techniques, such as SIMD and vectorization.Teach

  1. TCDQ-TCT retraction and losses during asynchronous beam dump

    CERN Document Server

    Bracco, Chiara; Quaranta, Elena; CERN. Geneva. ATS Department

    2016-01-01

    The protection provided by the TCDQs in case of asynchronous beam dump depends strongly on their correct setup. They have to respect the strict hierarchy of the full collimation system and shield the tertiary collimators in the experimental regions. This MD aimed at performing asynchronous beam dump tests with different configurations, in order to assess the minimum allowed retraction between TCTs and TCDQs and, as a consequence, on the The protection provided by the TCDQs in case of asynchronous beam dump depends strongly on their correct setup. They have to respect the strict hierarchy of the full collimation system and shield the tertiary collimators in the experimental regions. This MD aimed at performing asynchronous beam dump tests with different configurations, in order to assess the minimum allowed retraction between TCTs and TCDQs and, as a consequence, on the β* reach.

  2. Verification and Planning for Stochastic Processes with Asynchronous Events

    National Research Council Canada - National Science Library

    Younes, Hakan L

    2005-01-01

    .... The most common assumption is that of history-independence: the Markov assumption. In this thesis, the author considers the problems of verification and planning for stochastic processes with asynchronous events, without relying on the Markov assumption...

  3. Parallel algorithms

    CERN Document Server

    Casanova, Henri; Robert, Yves

    2008-01-01

    ""…The authors of the present book, who have extensive credentials in both research and instruction in the area of parallelism, present a sound, principled treatment of parallel algorithms. … This book is very well written and extremely well designed from an instructional point of view. … The authors have created an instructive and fascinating text. The book will serve researchers as well as instructors who need a solid, readable text for a course on parallelism in computing. Indeed, for anyone who wants an understandable text from which to acquire a current, rigorous, and broad vi

  4. Control of asynchronous motors. Volume 1. Modeling, vectorial control and direct torque control; Commande des moteurs asynchrones. Volume 1. Modelisation, controle vectoriel et DTC

    Energy Technology Data Exchange (ETDEWEB)

    Canudas de Wit, C. [Ecole Nationale Superieure d' Ingenieurs de Genie Chimique, ENSIGC, 31 - Toulouse (France)

    2000-07-01

    This first volume deals with the problems of control of asynchronous motors in industrial environments: industrial environment, variable speed, asynchronous motors and power supplies, modeling, direct torque control laws, control by controlled limit cycles under frequency constraints. (J.S.)

  5. Eventual Leader Service in Unreliable Asynchronous Systems: Why? How?

    OpenAIRE

    Raynal, Michel

    2007-01-01

    Providing processes with an {\\it eventual leader} service is an important issue when one has to design and implement a middleware layer on top of a failure-prone asynchronous distributed system. This invited lecture investigates this problem. It first shows that such a service cannot be built if the underlying system is fully asynchronous. Then, the paper visits several additional behavioral assumptions that have been proposed in the literature to cope with this impossibility and presents cor...

  6. Experimental 3D Asynchronous Field Programmable Gate Array (FPGA)

    Science.gov (United States)

    2015-03-01

    EXPERIMENTAL 3D ASYNCHRONOUS FIELD PROGRAMMABLE GATE ARRAY ( FPGA ) CORNELL UNIVERSITY MARCH 2015 FINAL TECHNICAL REPORT APPROVED FOR PUBLIC...From - To) OCT 2011 – OCT 2014 4. TITLE AND SUBTITLE EXPERIMENTAL 3D ASYNCHRONOUS FIELD PROGRAMMABLE GATE ARRAY ( FPGA ) 5a. CONTRACT NUMBER...in collaboration with Albany’s College of Nanoscale Science and Engineering. 15. SUBJECT TERMS 3D Technology, vertical interconnects, AFPGA, FPGA

  7. Rapid, generalized adaptation to asynchronous audiovisual speech.

    Science.gov (United States)

    Van der Burg, Erik; Goodbourn, Patrick T

    2015-04-07

    The brain is adaptive. The speed of propagation through air, and of low-level sensory processing, differs markedly between auditory and visual stimuli; yet the brain can adapt to compensate for the resulting cross-modal delays. Studies investigating temporal recalibration to audiovisual speech have used prolonged adaptation procedures, suggesting that adaptation is sluggish. Here, we show that adaptation to asynchronous audiovisual speech occurs rapidly. Participants viewed a brief clip of an actor pronouncing a single syllable. The voice was either advanced or delayed relative to the corresponding lip movements, and participants were asked to make a synchrony judgement. Although we did not use an explicit adaptation procedure, we demonstrate rapid recalibration based on a single audiovisual event. We find that the point of subjective simultaneity on each trial is highly contingent upon the modality order of the preceding trial. We find compelling evidence that rapid recalibration generalizes across different stimuli, and different actors. Finally, we demonstrate that rapid recalibration occurs even when auditory and visual events clearly belong to different actors. These results suggest that rapid temporal recalibration to audiovisual speech is primarily mediated by basic temporal factors, rather than higher-order factors such as perceived simultaneity and source identity. © 2015 The Author(s) Published by the Royal Society. All rights reserved.

  8. Managing Asynchronous Data in ATLAS's Concurrent Framework

    CERN Document Server

    AUTHOR|(INSPIRE)INSPIRE-00100895; The ATLAS collaboration; Baines, John; Bold, Tomasz; Calafiura, Paolo; Cranshaw, Jack; Dotti, Andrea; Farrell, Steven; Malon, David; Stewart, Graeme; Snyder, Scott; van Gemmeren, Peter; Tsulaia, Vakhtang; Wynne, Benjamin

    2016-01-01

    In order to be able to make effective use of emerging hardware, where the amount of memory available to any CPU is rapidly decreasing as the core count continues to rise, ATLAS has begun a migration to a concurrent, multi-threaded software framework, known as AthenaMT. Significant progress has been made in implementing AthenaMT - we can currently run realistic Geant4 simulations on massively concurrent machines. the migration of realistic prototypes of reconstruction workflows is more difficult, given the large amounts of legacy code and the complexity and challenges of reconstruction software. These types of workflows, however, are the types that will most benefit from the memory reduction features of a multi-threaded framework. One of the challenges that we will report on in this paper is the re-design and implementation of several key asynchronous technologies whose behaviour is radically different in a concurrent environment than in a serial one, namely the management of Conditions data and the Detector D...

  9. Asynchronous Forums in EAP: Assessment Issues

    Directory of Open Access Journals (Sweden)

    Sara Kol

    2008-06-01

    Full Text Available This paper reports on a pilot and a subsequent study that focused on the assessment of student writing in asynchronous text-stimulated forum discussions. The study, which was conducted in advanced English for Academic Purposes (EAP courses, aimed at determining suitable assessment criteria for written academic discussions. In addition, the study tapped student attitudes toward forums, checked the effect of forum participation on student writing, and characterized the text-stimulated forum discussions.Based on a content analysis of the pilot data, the constructs of reflection and interaction were selected as assessment criteria to be evaluated in the main study. These criteria were found to be usable but insufficient for student assessment in the EAP courses. A questionnaire showed that the student attitudes were positive and that most students felt that their writing improved, even though an analysis of language complexity showed no significant improvement. A qualitative analysis of the transcripts revealed deep student involvement with the content and with their peers as well as an academic register interspersed with conversational interactions.

  10. ASCERTAINMENT OF THE EQUIVALENT CIRCUIT PARAMETERS OF THE ASYNCHRONOUS MACHINE

    Directory of Open Access Journals (Sweden)

    V. S. Safaryan

    2015-01-01

    Full Text Available The article considers experimental and analytical determination of the asynchronous machine equivalent-circuit parameters with application of the reference data. Transient processes investigation of the asynchronous machines necessitates the equivalent circuit parameters (resistance impedance, inductances and coefficient of the stator-rotor contours mutual inductance that help form the transitory-process mathematical simulation model. The reference books do not provide those parameters; they instead give the rated ones (active power, voltage, slide, coefficient of performance and capacity coefficient as well as the ratio of starting and nominal currents and torques. The noted studies on the asynchronous machine equivalent-circuits parametrization fail to solve the problems ad finem or solve them with admissions. The paper presents experimental and analytical determinations of the asynchronous machine equivalent-circuit parameters: the experimental one based on the results of two measurements and the analytical one where the problem boils down to solving a system of nonlineal algebraic equations. The authors investigate the equivalent asynchronous machine input-resistance properties and adduce the dependence curvatures of the input-resistances on the slide. They present a symbolic model for analytical parameterization of the asynchronous machine equivalent-circuit that represents a system of nonlineal equations and requires one of the rotor-parameters arbitrary assignment. The article demonstrates that for the asynchronous machine equivalent-circuit experimental parameterization the measures are to be conducted of the stator-circuit voltage, current and active power with two different slides and arbitrary assignment of one of the rotor parameters. The paper substantiates the fact that additional measurement does not discard the rotor-parameter choice arbitrariness. The authors establish that in motoring mode there is a critical slide by which the

  11. An Asynchronous Many-Task Implementation of In-Situ Statistical Analysis using Legion.

    Energy Technology Data Exchange (ETDEWEB)

    Pebay, Philippe Pierre [Sandia National Lab. (SNL-CA), Livermore, CA (United States); Bennett, Janine Camille [Sandia National Lab. (SNL-CA), Livermore, CA (United States)

    2015-11-01

    In this report, we propose a framework for the design and implementation of in-situ analy- ses using an asynchronous many-task (AMT) model, using the Legion programming model together with the MiniAero mini-application as a surrogate for full-scale parallel scientific computing applications. The bulk of this work consists of converting the Learn/Derive/Assess model which we had initially developed for parallel statistical analysis using MPI [PTBM11], from a SPMD to an AMT model. In this goal, we propose an original use of the concept of Legion logical regions as a replacement for the parallel communication schemes used for the only operation of the statistics engines that require explicit communication. We then evaluate this proposed scheme in a shared memory environment, using the Legion port of MiniAero as a proxy for a full-scale scientific application, as a means to provide input data sets of variable size for the in-situ statistical analyses in an AMT context. We demonstrate in particular that the approach has merit, and warrants further investigation, in collaboration with ongoing efforts to improve the overall parallel performance of the Legion system.

  12. Physics and Language--Science and Rhetoric: Reviewing the Parallel Evolution of Theory on Motion and Meaning in the Aftermath of the Sokal Hoax.

    Science.gov (United States)

    Desilet, Gregory

    1999-01-01

    Argues that the deconstructive practice of disturbing the status quo between opposites constitutes one of the central themes of physics since the Enlightenment. Summarizes parallel developments in physics and language studies from Aristotle to Einstein. Contends that to question postmodern language theory exemplified in deconstruction necessitates…

  13. IHadoop: Asynchronous iterations for MapReduce

    KAUST Repository

    Elnikety, Eslam Mohamed Ibrahim

    2011-11-01

    MapReduce is a distributed programming frame-work designed to ease the development of scalable data-intensive applications for large clusters of commodity machines. Most machine learning and data mining applications involve iterative computations over large datasets, such as the Web hyperlink structures and social network graphs. Yet, the MapReduce model does not efficiently support this important class of applications. The architecture of MapReduce, most critically its dataflow techniques and task scheduling, is completely unaware of the nature of iterative applications; tasks are scheduled according to a policy that optimizes the execution for a single iteration which wastes bandwidth, I/O, and CPU cycles when compared with an optimal execution for a consecutive set of iterations. This work presents iHadoop, a modified MapReduce model, and an associated implementation, optimized for iterative computations. The iHadoop model schedules iterations asynchronously. It connects the output of one iteration to the next, allowing both to process their data concurrently. iHadoop\\'s task scheduler exploits inter-iteration data locality by scheduling tasks that exhibit a producer/consumer relation on the same physical machine allowing a fast local data transfer. For those iterative applications that require satisfying certain criteria before termination, iHadoop runs the check concurrently during the execution of the subsequent iteration to further reduce the application\\'s latency. This paper also describes our implementation of the iHadoop model, and evaluates its performance against Hadoop, the widely used open source implementation of MapReduce. Experiments using different data analysis applications over real-world and synthetic datasets show that iHadoop performs better than Hadoop for iterative algorithms, reducing execution time of iterative applications by 25% on average. Furthermore, integrating iHadoop with HaLoop, a variant Hadoop implementation that caches

  14. Molecular mechanisms for synchronous, asynchronous, and spontaneous neurotransmitter release.

    Science.gov (United States)

    Kaeser, Pascal S; Regehr, Wade G

    2014-01-01

    Most neuronal communication relies upon the synchronous release of neurotransmitters, which occurs through synaptic vesicle exocytosis triggered by action potential invasion of a presynaptic bouton. However, neurotransmitters are also released asynchronously with a longer, variable delay following an action potential or spontaneously in the absence of action potentials. A compelling body of research has identified roles and mechanisms for synchronous release, but asynchronous release and spontaneous release are less well understood. In this review, we analyze how the mechanisms of the three release modes overlap and what molecular pathways underlie asynchronous and spontaneous release. We conclude that the modes of release have key fusion processes in common but may differ in the source of and necessity for Ca(2+) to trigger release and in the identity of the Ca(2+) sensor for release.

  15. A Loosely Synchronizing Asynchronous Router for TDM-Scheduled NOCs

    DEFF Research Database (Denmark)

    Kotleas, Ioannis; Humphreys, Dean; Sørensen, Rasmus Bo

    2014-01-01

    This paper presents an asynchronous router design for use in time-division-multiplexed (TDM) networks-on-chip. Unlike existing synchronous, mesochronous and asynchronous router designs with similar functionality, the router is able to silently skip over cycles/TDM-slots where no traffic...... is scheduled and hence avoid all switching activity in the idle links and router ports. In this way switching activity is reduced to the minimum possible amount. The fact that this relaxed synchronization is sufficient to implement TDM scheduling represents a contribution at the conceptual level. The idea can...... only be implemented using asynchronous circuit techniques. To this end, the paper explores the use of “click-element” templates. Click-element templates use only flipflops and conventional gates, and this greatly simplifies the design process when using conventional EDA tools and standard cell...

  16. Asynchronous glaciations in arid continental climate

    Science.gov (United States)

    Batbaatar, Jigjidsurengiin; Gillespie, Alan R.; Fink, David; Matmon, Ari; Fujioka, Toshiyuki

    2018-02-01

    Mountain glaciers at ∼26-19 ka, during the global Last Glacial Maximum near the end of the last 105 yr glacial cycle, are commonly considered on the basis of dating and field mapping in several well-studied areas to have been the largest of the late Quaternary and to have advanced synchronously from region to region. However, a numerical sensitivity model (Rupper and Roe, 2008) predicts that the fraction of ablation due to melting varies across Central Asia in proportion to the annual precipitation. The equilibrium-line altitude of glaciers across this region likely varies accordingly: in high altitude, cold and arid regions sublimation can ablate most of the ice, whereas glaciers fed by high precipitation cannot ablate completely due to sublimation alone, but extend downhill until higher temperatures there cause them to melt. We have conducted field studies and 10Be dating at five glaciated sites along a precipitation gradient in Mongolia to test the Rupper/Roe model. The sites are located in nearby 1.875 × 1.875° cells of the Rupper/Roe model, each with a different melt fraction, in this little-studied region. The modern environment of the sites ranges from dry subhumid in the north (47.7° N) to arid in the south (45° N). Our findings show that the maximum local advances in the dry subhumid conditions predated the global Last Glacial Maximum and were likely from MIS 3. However, we also found that at ∼8-7 ka a cirque glacier in one mountain range of the arid Gobi desert grew to a magnitude comparable to that of the local maximum extent. This Holocene maximum occurred during a regional pluvial period thousands of years after the retreat of the Pleistocene glaciers globally. This asynchronous behavior is not predicted by the prevailing and generally correct presumption that glacier advances are dominantly driven by temperature, although precipitation also plays a role. Our findings are consistent with and support the Rupper/Roe model, which calls for

  17. Parallel Evolution in Science: The Historical Roots and Central Concepts of General Systems Theory; and "General Systems Theory,""Modern Organizational Theory," and Organizational Communication.

    Science.gov (United States)

    Lederman, Linda Costigan; Rogers, Don

    The two papers in this document focus on general systems theory. In her paper, Linda Lederman discusses the emergence and evolution of general systems theory, defines its central concepts, and draws some conclusions regarding the nature of the theory and its value as an epistemology. Don Rogers, in his paper, relates some of the important features…

  18. Parallel evolution in an invasive plant species : evolutionary changes in allocation to growth, defense, competitive ability and regrowth of invasive Jacobaea vulgaris

    NARCIS (Netherlands)

    Lin, Tiantian

    2015-01-01

    Although the introduction of invasive plant species in a given area causes economic and ecological problems, it still provides an ideal opportunity for ecologists to study evolutionary changes. According to the Evolution of Increased Competitive Ability hypothesis and Shifting Defense Hypothesis,

  19. On the theoretical gap between synchronous and asynchronous MPC protocols

    DEFF Research Database (Denmark)

    Beerliová-Trubíniová, Zuzana; Hirt, Martin; Nielsen, Jesper Buus

    2010-01-01

    that in the cryptographic setting (with setup), the sole reason for it is the distribution of inputs: given an oracle for input distribution, cryptographically-secure asynchronous MPC is possible with the very same condition as synchronous MPC, namely t ..., we show that such an input-distribution oracle can be reduced to an oracle that allows each party to synchronously broadcast one single message. This means that when one single round of synchronous broadcast is available, then asynchronous MPC is possible at the same condition as synchronous MPC...

  20. DESIGN METHODOLOGY OF SELF-EXCITED ASYNCHRONOUS GENERATOR

    Directory of Open Access Journals (Sweden)

    Berzan V.

    2012-04-01

    Full Text Available The paper sets out the methodology of designing an asynchronous generator with capacitive self-excitation. It is known that its design is possible on the basis of serial synchronous motor with squirrel cage rotor. With this approach, the design reworked only the stator winding of electrical machines, making it cost-effectively implement the creation of the generator. Therefore, the methodology for the design, optimization calculations, the development scheme and the stator winding excitation system gain, not only of practical interest, and may also be useful for specialists in the field of electrical machines in the design of asynchronous generators.

  1. Highly Scalable Asynchronous Computing Method for Partial Differential Equations: A Path Towards Exascale

    Science.gov (United States)

    Konduri, Aditya

    Many natural and engineering systems are governed by nonlinear partial differential equations (PDEs) which result in a multiscale phenomena, e.g. turbulent flows. Numerical simulations of these problems are computationally very expensive and demand for extreme levels of parallelism. At realistic conditions, simulations are being carried out on massively parallel computers with hundreds of thousands of processing elements (PEs). It has been observed that communication between PEs as well as their synchronization at these extreme scales take up a significant portion of the total simulation time and result in poor scalability of codes. This issue is likely to pose a bottleneck in scalability of codes on future Exascale systems. In this work, we propose an asynchronous computing algorithm based on widely used finite difference methods to solve PDEs in which synchronization between PEs due to communication is relaxed at a mathematical level. We show that while stability is conserved when schemes are used asynchronously, accuracy is greatly degraded. Since message arrivals at PEs are random processes, so is the behavior of the error. We propose a new statistical framework in which we show that average errors drop always to first-order regardless of the original scheme. We propose new asynchrony-tolerant schemes that maintain accuracy when synchronization is relaxed. The quality of the solution is shown to depend, not only on the physical phenomena and numerical schemes, but also on the characteristics of the computing machine. A novel algorithm using remote memory access communications has been developed to demonstrate excellent scalability of the method for large-scale computing. Finally, we present a path to extend this method in solving complex multi-scale problems on Exascale machines.

  2. THE ASYNCHRONOUS MACHINE WITH THE MASSIVE FERROMAGNETIC ROTOR AND CAPACITOR EXCITATION

    Directory of Open Access Journals (Sweden)

    Birladean A.A.

    2010-04-01

    Full Text Available An asynchronous machine with a massive ferromagnetic rotor of the various designs, improving its energy indicators is considered. Elaboration and experimental tests results of the asynchronous machine working in a generating mode at the lowered speed of rotation of a massive ferromagnetic rotor are presented. Conditions and possibilities of the asynchronous generator creation with capacitor excitation on the basis of the asynchronous machine with a massive rotor are shown as well.

  3. Parallelism, deep homology, and evo-devo.

    Science.gov (United States)

    Hall, Brian K

    2012-01-01

    Parallelism has been the subject of a number of recent studies that have resulted in reassessment of the term and the process. Parallelism has been aligned with homology leaving convergence as the only case of homoplasy, regarded as a transition between homologous and convergent characters, and defined as the independent evolution of genetic traits. Another study advocates abolishing the term parallelism and treating all cases of the independent evolution of characters as convergence. With the sophistication of modern genomics and genetic analysis, parallelism of characters of the phenotype is being discovered to reflect parallel genetic evolution. Approaching parallelism from developmental and genetic perspectives enables us to tease out the degree to which the reuse of pathways represent deep homology and is a major task for evolutionary developmental biology in the coming decades. © 2012 Wiley Periodicals, Inc.

  4. Performance limitations of parallel simulations

    Directory of Open Access Journals (Sweden)

    Liang Chen

    1998-01-01

    Full Text Available This study shows how the performance of a parallel simulation may be affected by the structure of the system being simulated. We consider a wide class of “linearly synchronous” simulations consisting of asynchronous and synchronous parallel simulations (or other distributed-processing systems, with conservative or optimistic protocols, in which the differences in the virtual times of the logical processes being simulated in real time t are of the order o(t as t tends to infinity. Using a random time transformation idea, we show how a simulation's processing rate in real time is related to the throughput rates in virtual time of the system being simulated. This relation is the basis for establishing upper bounds on simulation processing rates. The bounds for the rates are tight and are close to the actual rates as numerical experiments indicate. We use the bounds to determine the maximum number of processors that a simulation can effectively use. The bounds also give insight into efficient assignment of processors to the logical processes in a simulation.

  5. Parallel evolution in an invasive plant species: evolutionary changes in allocation to growth, defense, competitive ability and regrowth of invasive Jacobaea vulgaris

    OpenAIRE

    Lin, Tiantian

    2015-01-01

    Although the introduction of invasive plant species in a given area causes economic and ecological problems, it still provides an ideal opportunity for ecologists to study evolutionary changes. According to the Evolution of Increased Competitive Ability hypothesis and Shifting Defense Hypothesis, the release from specialist herbivores after introduction is expected invasive plants to shift their costly defense against specialist herbivores to cheaper defense against local generalist herbivore...

  6. Parallel R

    CERN Document Server

    McCallum, Ethan

    2011-01-01

    It's tough to argue with R as a high-quality, cross-platform, open source statistical software product-unless you're in the business of crunching Big Data. This concise book introduces you to several strategies for using R to analyze large datasets. You'll learn the basics of Snow, Multicore, Parallel, and some Hadoop-related tools, including how to find them, how to use them, when they work well, and when they don't. With these packages, you can overcome R's single-threaded nature by spreading work across multiple CPUs, or offloading work to multiple machines to address R's memory barrier.

  7. Promoting and Scaffolding Argumentation through Reflective Asynchronous Discussions

    Science.gov (United States)

    Lin, Huann-shyang; Hong, Zuway-R.; Lawrenz, Frances

    2012-01-01

    The purpose of this quasi-experimental study was to explore the impact of asynchronous discussion on the quality and complexity of college students' arguments. Three different cohorts of students registered in a physical science course in 2009 Fall, 2010 Spring, and 2010 Fall semesters were briefly supported with scaffolding in class and then…

  8. Asynchronous online foresight panels: the case of wildfire management

    Science.gov (United States)

    David N. Bengston; Robert L. Olson

    2015-01-01

    Text-based asynchronous online conferencing involves structured online discussion and deliberation among multiple participants from multiple sites in which there is a delay in interaction between contributors. This method has been widely used for a variety of purposes in higher education and other settings, but has not been commonly used in futures research. This paper...

  9. Numerical simulation of three phase asynchronous motor to ...

    African Journals Online (AJOL)

    Numerical simulation of three phase asynchronous motor to diagnose precisely the stator unbalanced voltage anomaly. ... First, the stator currents data pattern is used as a preliminary diagnosis. ... This similarity leads to uncertainty in the detection of the fault, which makes imperative the use of complementary technique.

  10. Selective distortion of body image by asynchronous visuotactile stimulation.

    Science.gov (United States)

    Perez-Marcos, Daniel; Martini, Matteo; Fuentes, Christina T; Bellido Rivas, Anna I; Haggard, Patrick; Sanchez-Vives, Maria V

    2017-12-18

    In the rubber hand illusion (RHI), a rubber hand is felt as being part of one's body. This illusion is evoked by providing synchronous visuotactile stimulation to the fake and real hands. Asynchronous visuotactile stimulation is known not to produce such an illusion of ownership, being commonly used as the control condition. Here we explored the impact of synchronous and asynchronous visuotactile stimulation on the body image. We combined the induction of the RHI with a quantitative test for the internal representation of body metrics (i.e., the positions of key fiducial points on the body relative to each other). We found a significant recalibration of the upper/lower arm lengths following asynchronous visuotactile stimulation. In particular, we observed a selective elongation of the lower arm, a distortion typical of deafferentation. Conversely, synchronous visuotactile stimulation did not alter the estimation of the arm segments' length. Our findings are consistent with a dynamic internal representation of body image that is continuously updated based on incoming multisensory information. Furthermore, the use of asynchronous multisensory stimulation as a neutral condition should be reconsidered since it introduces changes in the body image. Copyright © 2017 Elsevier Ltd. All rights reserved.

  11. Student Moderators in Asynchronous Online Discussion: A Question of Questions

    Science.gov (United States)

    Zingaro, Daniel

    2012-01-01

    Much current research exalts the benefits of having students facilitate weekly discussions in asynchronous online courses. This study seeks to add to what is known about student moderation through an analysis of the types of questions students use to spur each discussion. Prior experimental work has demonstrated that the types of questions posed…

  12. Designing Communities of Learners for Asynchronous Distance Education.

    Science.gov (United States)

    Moller, Leslie

    1998-01-01

    Describes the need for learning communities within the context of asynchronous distance education. Highlights include the relationship of community and distance learners; community as social reinforcement and as information exchange; and types of communities, including academic support communities, intellectual support communities, and…

  13. Cyber Asynchronous versus Blended Cyber Approach in Distance English Learning

    Science.gov (United States)

    Ge, Zi-Gang

    2012-01-01

    This study aims to compare the single cyber asynchronous learning approach with the blended cyber learning approach in distance English education. Two classes of 70 students participated in this study, which lasted one semester of about four months, with one class using the blended approach for their English study and the other only using the…

  14. Asynchronous Assessment in a Large Lecture Marketing Course

    Science.gov (United States)

    Downey, W. Scott; Schetzsle, Stacey

    2012-01-01

    Asynchronous assessment, which includes quizzes or exams online or outside class, offers marketing educators an opportunity to make more efficient use of class time and to enhance students' learning experiences by giving them more flexibility and choice in their assessment environment. In this paper, we examine the performance difference between…

  15. Designing a Web-Based Asynchronous Innovation/Entrepreneurism Course

    Science.gov (United States)

    Ghandforoush, Parviz

    2017-01-01

    Teaching an online fully asynchronous information technology course that requires students to ideate, build an e-commerce website, and develop an effective business plan involves a well-developed and highly engaging course design. This paper describes the design, development, and implementation of such a course and presents information on…

  16. Numerical simulation of three phase asynchronous motor to ...

    African Journals Online (AJOL)

    Simulation numérique du moteur asynchrone triphasé pour diagnostiquer précisément le défaut du déséquilibre de ..... carrying more energy [9]. This severity index assumes values ..... its spectrum in normal circumstance. It was theoretically predicted that in this condition, the EPVA signature would be free from any spectral.

  17. Development of speech glimpsing in synchronously and asynchronously modulated noise.

    Science.gov (United States)

    Hall, Joseph W; Buss, Emily; Grose, John H

    2014-06-01

    This study investigated development of the ability to integrate glimpses of speech in modulated noise. Noise was modulated synchronously across frequency or asynchronously such that when noise below 1300 Hz was "off," noise above 1300 Hz was "on," and vice versa. Asynchronous masking was used to examine the ability of listeners to integrate speech glimpses separated across time and frequency. The study used the Word Intelligibility by Picture Identification (WIPI) test and included adults, older children (age 8-10 yr) and younger children (5-7 yr). Results showed poorer masking release for the children than the adults for synchronous modulation but not for asynchronous modulation. It is possible that children can integrate cues relatively well when all intervals provide at least partial speech information (asynchronous modulation) but less well when some intervals provide little or no information (synchronous modulation). Control conditions indicated that children appeared to derive less benefit than adults from speech cues below 1300 Hz. This frequency effect was supported by supplementary conditions where the noise was unmodulated and the speech was low- or high-pass filtered. Possible sources of the developmental frequency effect include differences in frequency weighting, effective speech bandwidth, and the signal-to-noise ratio in the unmodulated noise condition.

  18. Reconceptualising Moderation in Asynchronous Online Discussions Using Grounded Theory

    Science.gov (United States)

    Vlachopoulos, Panos; Cowan, John

    2010-01-01

    This article reports a grounded theory study of the moderation of asynchronous online discussions, to explore the processes by which tutors in higher education decide when and how to moderate. It aims to construct a theory of e-moderation based on some key factors which appear to influence e-moderation. It discusses previous research on the…

  19. Adding the Human Touch to Asynchronous Online Learning

    Science.gov (United States)

    Glenn, Cynthia Wheatley

    2018-01-01

    For learners to actively accept responsibility in a virtual classroom platform, it is necessary to provide special motivation extending across the traditional classroom setting into asynchronous online learning. This article explores specific ways to do this that bridge the gap between ground and online students' learning experiences, and how…

  20. Miscellany of Students' Satisfaction in an Asynchronous Learning Environment

    Science.gov (United States)

    Larbi-Siaw, Otu; Owusu-Agyeman, Yaw

    2017-01-01

    This study investigates the determinants of students' satisfaction in an asynchronous learning environment using seven key considerations: the e-learning environment, student-content interaction, student and student interaction, student-teacher interaction, group cohesion and timely participation, knowledge of Internet usage, and satisfaction. The…

  1. An improved modelling of asynchronous machine with skin-effect ...

    African Journals Online (AJOL)

    The conventional method of analysis of Asynchronous machine fails to give accurate results especially when the machine is operated under high rotor frequency. At high rotor frequency, skin-effect dominates causing the rotor impedance to be frequency dependant. This paper therefore presents an improved method of ...

  2. Renewal Approach to the Analysis of the Asynchronous State for Coupled Noisy Oscillators.

    Science.gov (United States)

    Farkhooi, Farzad; van Vreeswijk, Carl

    2015-07-17

    We develop a framework in which the activity of nonlinear pulse-coupled oscillators is posed within the renewal theory. In this approach, the evolution of the interevent density allows for a self-consistent calculation that determines the asynchronous state and its stability. This framework can readily be extended to the analysis of systems with more state variables and provides a population density treatment to evolve them in their thermodynamical limits. To demonstrate this we study a nonlinear pulse-coupled system, where couplings are dynamic and activity dependent. We investigate its stability and numerically study the nonequilibrium behavior of the system after the bifurcation. We show that this system undergoes a supercritical Hopf bifurcation to collective synchronization.

  3. Distributed Computing for Signal Processing: Modeling of Asynchronous Parallel Computation. Appendix A.

    Science.gov (United States)

    1983-03-01

    switching elements are 3x3 crossbars. In [PaR82], it is shown that the Gamma network can perform some permutation connections that the LADM cannot, e.g...ADM can perform any permutation that the (;eneralized Cube network can. Similarly, the LADM can perform any permutation the inverse Generalized Cube...Between Source 9 and Destination 31 in the LADM Network with lialf-Links (N =32). T = 010110. Solid lines - positive and negative dominant paths; dotted

  4. Parallel Lines

    Directory of Open Access Journals (Sweden)

    James G. Worner

    2017-05-01

    Full Text Available James Worner is an Australian-based writer and scholar currently pursuing a PhD at the University of Technology Sydney. His research seeks to expose masculinities lost in the shadow of Australia’s Anzac hegemony while exploring new opportunities for contemporary historiography. He is the recipient of the Doctoral Scholarship in Historical Consciousness at the university’s Australian Centre of Public History and will be hosted by the University of Bologna during 2017 on a doctoral research writing scholarship.   ‘Parallel Lines’ is one of a collection of stories, The Shapes of Us, exploring liminal spaces of modern life: class, gender, sexuality, race, religion and education. It looks at lives, like lines, that do not meet but which travel in proximity, simultaneously attracted and repelled. James’ short stories have been published in various journals and anthologies.

  5. Parallel kinematics type, kinematics, and optimal design

    CERN Document Server

    Liu, Xin-Jun

    2014-01-01

    Parallel Kinematics- Type, Kinematics, and Optimal Design presents the results of 15 year's research on parallel mechanisms and parallel kinematics machines. This book covers the systematic classification of parallel mechanisms (PMs) as well as providing a large number of mechanical architectures of PMs available for use in practical applications. It focuses on the kinematic design of parallel robots. One successful application of parallel mechanisms in the field of machine tools, which is also called parallel kinematics machines, has been the emerging trend in advanced machine tools. The book describes not only the main aspects and important topics in parallel kinematics, but also references novel concepts and approaches, i.e. type synthesis based on evolution, performance evaluation and optimization based on screw theory, singularity model taking into account motion and force transmissibility, and others.   This book is intended for researchers, scientists, engineers and postgraduates or above with interes...

  6. Evolution of EF-hand calcium-modulated proteins. III. Exon sequences confirm most dendrograms based on protein sequences: calmodulin dendrograms show significant lack of parallelism

    Science.gov (United States)

    Nakayama, S.; Kretsinger, R. H.

    1993-01-01

    In the first report in this series we presented dendrograms based on 152 individual proteins of the EF-hand family. In the second we used sequences from 228 proteins, containing 835 domains, and showed that eight of the 29 subfamilies are congruent and that the EF-hand domains of the remaining 21 subfamilies have diverse evolutionary histories. In this study we have computed dendrograms within and among the EF-hand subfamilies using the encoding DNA sequences. In most instances the dendrograms based on protein and on DNA sequences are very similar. Significant differences between protein and DNA trees for calmodulin remain unexplained. In our fourth report we evaluate the sequences and the distribution of introns within the EF-hand family and conclude that exon shuffling did not play a significant role in its evolution.

  7. Adaptation of AMO-FBMC-OQAM in optical access network for accommodating asynchronous multiple access in OFDM-based uplink transmission

    Science.gov (United States)

    Jung, Sun-Young; Jung, Sang-Min; Han, Sang-Kook

    2015-01-01

    Exponentially expanding various applications in company with proliferation of mobile devices make mobile traffic exploded annually. For future access network, bandwidth efficient and asynchronous signals converged transmission technique is required in optical network to meet a huge bandwidth demand, while integrating various services and satisfying multiple access in perceived network resource. Orthogonal frequency division multiplexing (OFDM) is highly bandwidth efficient parallel transmission technique based on orthogonal subcarriers. OFDM has been widely studied in wired-/wireless communication and became a Long term evolution (LTE) standard. Consequently, OFDM also has been actively researched in optical network. However, OFDM is vulnerable frequency and phase offset essentially because of its sinc-shaped side lobes, therefore tight synchronism is necessary to maintain orthogonality. Moreover, redundant cyclic prefix (CP) is required in dispersive channel. Additionally, side lobes act as interference among users in multiple access. Thus, it practically hinders from supporting integration of various services and multiple access based on OFDM optical transmission In this paper, adaptively modulated optical filter bank multicarrier system with offset QAM (AMO-FBMC-OQAM) is introduced and experimentally investigated in uplink optical transmission to relax multiple access interference (MAI), while improving bandwidth efficiency. Side lobes are effectively suppressed by using FBMC, therefore the system becomes robust to path difference and imbalance among optical network units (ONUs), which increase bandwidth efficiency by reducing redundancy. In comparison with OFDM, a signal performance and an efficiency of frequency utilization are improved in the same experimental condition. It enables optical network to effectively support heterogeneous services and multiple access.

  8. Venom regeneration in the centipede Scolopendra polymorpha: evidence for asynchronous venom component synthesis.

    Science.gov (United States)

    Cooper, Allen M; Kelln, Wayne J; Hayes, William K

    2014-12-01

    Venom regeneration comprises a vital process in animals that rely on venom for prey capture and defense. Venom regeneration in scolopendromorph centipedes likely influences their ability to subdue prey and defend themselves, and may influence the quantity and quality of venom extracted by researchers investigating the venom's biochemistry. We investigated venom volume and total protein regeneration during the 14-day period subsequent to venom extraction in the North American centipede Scolopendra polymorpha. We further tested the hypothesis that venom protein components, separated by reversed-phase fast protein liquid chromatography (RP-FPLC), undergo asynchronous (non-parallel) synthesis. During the first 48 h, volume and protein mass increased linearly. Protein regeneration lagged behind volume regeneration, with 65–86% of venom volume and 29–47% of protein mass regenerated during the first 2 days. No additional regeneration occurred over the subsequent 12 days, and neither volume nor protein mass reached initial levels 7 months later (93% and 76%, respectively). Centipede body length was negatively associated with rate of venom regeneration. Analysis of chromatograms of individual venom samples revealed that 5 of 10 chromatographic regions and 12 of 28 peaks demonstrated changes in percent of total peak area (i.e., percent of total protein) among milking intervals, indicating that venom proteins are regenerated asynchronously. Moreover, specimens from Arizona and California differed in relative amounts of some venom components. The considerable regeneration of venom occurring within the first 48 h, despite the reduced protein content, suggests that predatory and defensive capacities are minimally constrained by the timing of venom replacement.

  9. Layer-parallel shortening across the Sevier fold-thrust belt and Laramide foreland of Wyoming: spatial and temporal evolution of a complex geodynamic system

    Science.gov (United States)

    Weil, Arlo Brandon; Yonkee, W. Adolph

    2012-12-01

    Varying patterns of layer-parallel shortening (LPS) and vertical-axis rotations from the thin-skin Sevier fold-thrust belt to the thick-skin Laramide foreland of Wyoming are quantified from integrated structural, anisotropy of magnetic susceptibility (AMS), and paleomagnetic analyses. Within the Sevier belt, widespread early LPS was accommodated by spaced cleavage, fracture sets, minor folds, and minor faults. LPS directions are subperpendicular to structural trends of systematically curved thrust sheets of the Wyoming salient, reflecting a combination of primary dispersion and secondary rotation during thrusting. Within the Laramide foreland, limited LPS was accommodated mostly by minor faults with conjugate wedge and strike-slip geometries. LPS directions in gentler fold limbs vary from perpendicular to acute with structural trends of variably oriented, anastomosing basement-cored arches. Steep forelimbs display more complex relations, including younger fault sets that developed during evolving stress states and localized vertical-axis rotations. Although internal strain is limited, weak AMS lineations defined by kinked and rotated phyllosilicates are widely developed and consistently oriented perpendicular to measured LPS directions. Palinspastically restored LPS directions, corrected for paleomagnetically determined vertical-axis rotations, vary on average from W-E in the Sevier belt to WSW-ENE in the Laramide foreland. In detail, LPS directions display deflections related to primary sedimentary wedge geometry and basement fabrics. LPS in the Sevier belt is interpreted to partly reflect stress transmitted from the hinterland through the growing orogenic wedge and topographic stress along the front of the wedge. LPS in the Laramide foreland is interpreted to partly reflect basal traction during flat-slab subduction beneath thick cratonic lithosphere, with spatial-temporal variations in stress trajectories related to basement heterogeneities and evolving fault

  10. Escherichia coli Serotype O55:H7 Diversity Supports Parallel Acquisition of Bacteriophage at Shiga Toxin Phage Insertion Sites during Evolution of the O157:H7 Lineage

    Science.gov (United States)

    Kyle, Jennifer L.; Cummings, Craig A.; Quiñones, Beatriz; Vatta, Paolo; Newton, Elizabeth; Huynh, Steven; Swimley, Michelle; Degoricija, Lovorka; Barker, Melissa; Fontanoz, Samar; Nguyen, Kimberly; Patel, Ronak; Fang, Rixun; Tebbs, Robert; Petrauskene, Olga; Furtado, Manohar; Mandrell, Robert E.

    2012-01-01

    Enteropathogenic Escherichia coli (EPEC) continues to be a leading cause of mortality and morbidity in children around the world. Two EPEC genomes have been fully sequenced: those of EPEC O127:H6 strain E2348/69 (United Kingdom, 1969) and EPEC O55:H7 strain CB9615 (Germany, 2003). The O55:H7 serotype is a recent precursor to the virulent enterohemorrhagic E. coli O157:H7. To explore the diversity of O55:H7 and better understand the clonal evolution of O157:H7, we fully sequenced EPEC O55:H7 strain RM12579 (California, 1974), which was collected 1 year before the first U.S. isolate of O157:H7 was identified in California. Phage-related sequences accounted for nearly all differences between the two O55:H7 strains. Additionally, O55:H7 and O157:H7 strains were tested for the presence and insertion sites of Shiga toxin gene (stx)-containing bacteriophages. Analysis of non-phage-associated genes supported core elements of previous O157:H7 stepwise evolutionary models, whereas phage composition and insertion analyses suggested a key refinement. Specifically, the placement and presence of lambda-like bacteriophages (including those containing stx) should not be considered stable evolutionary markers or be required in placing O55:H7 and O157:H7 strains within the stepwise evolutionary models. Additionally, we suggest that a 10.9-kb region (block 172) previously believed unique to O55:H7 strains can be used to identify early O157:H7 strains. Finally, we defined two subsets of O55:H7 strains that share an as-yet-unobserved or extinct common ancestor with O157:H7 strains. Exploration of O55:H7 diversity improved our understanding of the evolution of E. coli O157:H7 and suggested a key revision to accommodate existing and future configurations of stx-containing bacteriophages into current models. PMID:22328665

  11. Specific retention of the protostome-specific PsGEF may parallel with the evolution of mushroom bodies in insect and lophotrochozoan brains

    Directory of Open Access Journals (Sweden)

    Kohno Keigo

    2009-05-01

    Full Text Available Abstract Background Gene gain and subsequent retention or loss during evolution may be one of the underlying mechanisms involved in generating the diversity of metazoan nervous systems. However, the causal relationships acting therein have not been studied extensively. Results We identified the gene PsGEF (protostome-specific GEF, which is present in all the sequenced genomes of insects and limpet but absent in those of sea anemones, deuterostomes, and nematodes. In Drosophila melanogaster, PsGEF encodes a short version of a protein with the C2 and PDZ domains, as well as a long version with the C2, PDZ, and RhoGEF domains through alternative splicing. Intriguingly, the exons encoding the RhoGEF domain are specifically deleted in the Daphnia pulex genome, suggesting that Daphnia PsGEF contains only the C2 and PDZ domains. Thus, the distribution of PsGEF containing the C2, PDZ, and RhoGEF domains among metazoans appears to coincide with the presence of mushroom bodies. Mushroom bodies are prominent neuropils involved in the processing of multiple sensory inputs as well as associative learning in the insect, platyhelminth, and annelid brains. In the adult Drosophila brain, PsGEF is expressed in mushroom bodies, antennal lobe, and optic lobe, where it is necessary for the correct axon branch formation of alpha/beta neurons in mushroom bodies. PsGEF genetically interacts with Rac1 but not other Rho family members, and the RhoGEF domain of PsGEF induces actin polymerization in the membrane, thus resulting in the membrane ruffling that is observed in cultured cells with activated forms of Rac. Conclusion The specific acquisition of PsGEF by the last common ancestor of protostomes followed by its retention or loss in specific animal species during evolution demonstrates that there are some structural and/or functional features common between insect and lophotrochozoan nervous systems (for example, mushroom bodies, which are absent in all deuterostomes

  12. Pre-synthesis Optimization for Asynchronous Circuits Using Compiler Techniques

    Science.gov (United States)

    Zamanzadeh, Sharareh; Najibi, Mehrdad; Pedram, Hossein

    The effectiveness of traditional compiler techniques employed in high-level synthesis of synchronous circuits aiming to present a generic code is studied for asynchronous synthesis by considering the special features of these circuits. The compiler methods can be used innovatively to improve the synthesis results in both power consumption and area. The compiler methods like speculation, loop invariant code motion and condition expansion are applicable in decreasing mass of handshaking circuits and intermediate modules. Moreover, they eliminate conditional access to variables and ports and reducing the amount of completion detection circuits. The approach is superimposed on to Persia synthesis toolset as a presynthesis source-to-source transformation phase, and results shows on average 22% improvement in terms of area and 24 % in power consumption for asynchronous benchmarks.

  13. Mixing rich and asynchronous communication for new service development performance

    OpenAIRE

    Storey, Chris; Perks, Helen

    2015-01-01

    This article explores the nature of relationships between internal communication modes, new service development (NSD) competencies (specifically learning and development competencies) and NSD performance. To do so, it draws on and advances communication theory by comparing and contrasting the contingent approach, favoured by media richness theory and media synchronicity theory, with the multiplicative manner of dual coding theory. Antecedent roles of rich and asynchronous communication modes ...

  14. Asynchronous Multi-Party Computation with Quadratic Communication

    DEFF Research Database (Denmark)

    Hirt, Martin; Nielsen, Jesper Buus; Przydatek, Bartosz

    2008-01-01

    We present an efficient protocol for secure multi-party computation in the asynchronous model with optimal resilience. For n parties, up to t < n/3 of them being corrupted, and security parameter κ, a circuit with c gates can be securely computed with communication complexity O(cn^2k) bits, which...... circuit randomization due to Beaver (Crypto’91), and an abstraction of certificates, which can be of independent interest....

  15. Marine Forces Reserve: Accelerating Knowledge Flow through Asynchronous Learning Technologies

    Science.gov (United States)

    2014-12-19

    Substantial evidence indicates that—with informed instruction design and appropriate pedagogy —the efficacy of online education and training is...efficacy of online education and training is at least 3 comparable to that of classroom teaching. Indeed, the educational psychology literature is...learning in an education environment, and we adapt such highly effective asynchronous learning techniques and technologies to the I-I training task

  16. IDENTIFICATION AND CONTROL OF AN ASYNCHRONOUS MACHINE USING NEURAL NETWORKS

    Directory of Open Access Journals (Sweden)

    A ZERGAOUI

    2000-06-01

    Full Text Available In this work, we present the application of artificial neural networks to the identification and control of the asynchronous motor, which is a complex nonlinear system with variable internal dynamics.  We show that neural networks can be applied to control the stator currents of the induction motor.  The results of the different simulations are presented to evaluate the performance of the neural controller proposed.

  17. Psychophysiological effects of synchronous versus asynchronous music during cycling.

    Science.gov (United States)

    Lim, Harry B T; Karageorghis, Costas I; Romer, Lee M; Bishop, Daniel T

    2014-02-01

    Synchronizing movement to a musical beat may reduce the metabolic cost of exercise, but findings to date have been equivocal. Our aim was to examine the degree to which the synchronous application of music moderates the metabolic demands of a cycle ergometer task. Twenty-three recreationally active men made two laboratory visits. During the first visit, participants completed a maximal incremental ramp test on a cycle ergometer. At the second visit, they completed four randomized 6-min cycling bouts at 90% of ventilatory threshold (control, metronome, synchronous music, and asynchronous music). Main outcome variables were oxygen uptake, HR, ratings of dyspnea and limb discomfort, affective valence, and arousal. No significant differences were evident for oxygen uptake. HR was lower under the metronome condition (122 ± 15 bpm) compared to asynchronous music (124 ± 17 bpm) and control (125 ± 16 bpm). Limb discomfort was lower while listening to the metronome (2.5 ± 1.2) and synchronous music (2.3 ± 1.1) compared to control (3.0 ± 1.5). Both music conditions, synchronous (1.9 ± 1.2) and asynchronous (2.1 ± 1.3), elicited more positive affective valence compared to metronome (1.2 ± 1.4) and control (1.2 ± 1.2), while arousal was higher with synchronous music (3.4 ± 0.9) compared to metronome (2.8 ± 1.0) and control (2.8 ± 0.9). Synchronizing movement to a rhythmic stimulus does not reduce metabolic cost but may lower limb discomfort. Moreover, synchronous music has a stronger effect on limb discomfort and arousal when compared to asynchronous music.

  18. The Evolution of the Internet Community and the"Yet-to-Evolve" Smart Grid Community: Parallels and Lessons-to-be-Learned

    Energy Technology Data Exchange (ETDEWEB)

    McParland, Charles

    2009-11-06

    The Smart Grid envisions a transformed US power distribution grid that enables communicating devices, under human supervision, to moderate loads and increase overall system stability and security. This vision explicitly promotes increased participation from a community that, in the past, has had little involvement in power grid operations -the consumer. The potential size of this new community and its member's extensive experience with the public Internet prompts an analysis of the evolution and current state of the Internet as a predictor for best practices in the architectural design of certain portions of the Smart Grid network. Although still evolving, the vision of the Smart Grid is that of a community of communicating and cooperating energy related devices that can be directed to route power and modulate loads in pursuit of an integrated, efficient and secure electrical power grid. The remaking of the present power grid into the Smart Grid is considered as fundamentally transformative as previous developments such as modern computing technology and high bandwidth data communications. However, unlike these earlier developments, which relied on the discovery of critical new technologies (e.g. the transistor or optical fiber transmission lines), the technologies required for the Smart Grid currently exist and, in many cases, are already widely deployed. In contrast to other examples of technical transformations, the path (and success) of the Smart Grid will be determined not by its technology, but by its system architecture. Fortunately, we have a recent example of a transformative force of similar scope that shares a fundamental dependence on our existing communications infrastructure - namely, the Internet. We will explore several ways in which the scale of the Internet and expectations of its users have shaped the present Internet environment. As the presence of consumers within the Smart Grid increases, some experiences from the early growth of the

  19. A novel asynchronous access method with binary interfaces

    Directory of Open Access Journals (Sweden)

    Torres-Solis Jorge

    2008-10-01

    Full Text Available Abstract Background Traditionally synchronous access strategies require users to comply with one or more time constraints in order to communicate intent with a binary human-machine interface (e.g., mechanical, gestural or neural switches. Asynchronous access methods are preferable, but have not been used with binary interfaces in the control of devices that require more than two commands to be successfully operated. Methods We present the mathematical development and evaluation of a novel asynchronous access method that may be used to translate sporadic activations of binary interfaces into distinct outcomes for the control of devices requiring an arbitrary number of commands to be controlled. With this method, users are required to activate their interfaces only when the device under control behaves erroneously. Then, a recursive algorithm, incorporating contextual assumptions relevant to all possible outcomes, is used to obtain an informed estimate of user intention. We evaluate this method by simulating a control task requiring a series of target commands to be tracked by a model user. Results When compared to a random selection, the proposed asynchronous access method offers a significant reduction in the number of interface activations required from the user. Conclusion This novel access method offers a variety of advantages over traditionally synchronous access strategies and may be adapted to a wide variety of contexts, with primary relevance to applications involving direct object manipulation.

  20. Dynamic modeling of an asynchronous squirrel-cage machine; Modelisation dynamique d'une machine asynchrone a cage

    Energy Technology Data Exchange (ETDEWEB)

    Guerette, D.

    2009-07-01

    This document presented a detailed mathematical explanation and validation of the steps leading to the development of an asynchronous squirrel-cage machine. The MatLab/Simulink software was used to model a wind turbine at variable high speeds. The asynchronous squirrel-cage machine is an electromechanical system coupled to a magnetic circuit. The resulting electromagnetic circuit can be represented as a set of resistances, leakage inductances and mutual inductances. Different models were used for a comparison study, including the Munteanu, Boldea, Wind Turbine Blockset, and SimPowerSystem. MatLab/Simulink modeling results were in good agreement with the results from other comparable models. Simulation results were in good agreement with analytical calculations. 6 refs, 2 tabs, 9 figs.

  1. ON THE ISSUE OF VECTOR CONTROL OF THE ASYNCHRONOUS MOTORS

    Directory of Open Access Journals (Sweden)

    B. I. Firago

    2015-01-01

    Full Text Available The paper considers the issue of one of the widespread types of vector control realization for the asynchronous motors with a short-circuited rotor. Of all more than 20 vector control types known presently, the following are applied most frequently: direct vector control with velocity pickup (VP, direct vector control without VP, indirect vector control with VP and indirect vector control without VP. Despite the fact that the asynchronous-motor indirect vector control without VP is the easiest and most spread, the absence of VP does not allow controlling the motor electromagnetic torque at zero velocity. This is the reason why for electric motor drives of such requirements they utilize the vector control with a velocity transducer. The systems of widest dissemination became the direct and indirect vector control systems with X-axis alignment of the synchronously rotating x–y-coordinate frame along the rotor flux-linkage vector inasmuch as this provides the simplest correlations for controlling variables. Although these two types of vector control are well presented in literature, a number of issues concerning their realization and practical application require further elaboration. These include: the block schemes adequate representation as consisted with the modern realization of vector control and clarification of the analytical expressions for evaluating the regulator parameters.The authors present a technique for evaluating the dynamics of an asynchronous electric motor drive with direct vector control and x-axis alignment along the vector of rotor flux linkage. The article offers a generalized structure of this vector control type with detailed description of its principal blocks: controlling system, frequency converter, and the asynchronous motor.The paper presents a direct vector control simulating model developed in the MatLab environment on the grounds of this structure. The authors illustrate the described technique with the results

  2. Pharmacists' perception of synchronous versus asynchronous distance learning for continuing education programs.

    Science.gov (United States)

    Buxton, Eric C

    2014-02-12

    To evaluate and compare pharmacists' satisfaction with the content and learning environment of a continuing education program series offered as either synchronous or asynchronous webinars. An 8-lecture series of online presentations on the topic of new drug therapies was offered to pharmacists in synchronous and asynchronous webinar formats. Participants completed a 50-question online survey at the end of the program series to evaluate their perceptions of the distance learning experience. Eighty-two participants completed the survey instrument (41 participants from the live webinar series and 41 participants from the asynchronous webinar series.) Responses indicated that while both groups were satisfied with the program content, the asynchronous group showed greater satisfaction with many aspects of the learning environment. The synchronous and asynchronous webinar participants responded positively regarding the quality of the programming and the method of delivery, but asynchronous participants rated their experience more positively overall.

  3. Developmental parallelism in primates.

    Science.gov (United States)

    Sikorska-Piwowska, Z M; Dawidowicz, A L

    2017-01-01

    The authors examined a large random sample of skulls from two species of macaques: rhesus monkeys and cynomolgus monkeys. The skulls were measured, divided into age and sex groups and thoroughly analysed using statistical methods. The analysis shows that skulls of young rhesuses are considerably more domed, i.e. have better-developed neurocrania, than their adult counterparts. Male and female skulls, on the other hand, were found to be very similar, which means that sexual dimorphism of the rhesus macaque was suppressed. Both of these patterns are known from the human evolutionary pattern. No such parallelism to the development of Homo sapiens was found in the cynomolgus monkeys. The authors conclude that mosaic hominisation trends may have featured in the evolution of all primates. This would mean that apes were not a necessary step on the evolutionary way leading to the development of Homo sapiens, who may have started to evolve at an earlier stage of monkeys.

  4. Behavioral Synthesis of Asynchronous Circuits Using Syntax Directed Translation as Backend

    DEFF Research Database (Denmark)

    Nielsen, Sune Fallgaard; Sparsø, Jens; Madsen, Jan

    2009-01-01

    The current state-of-the art in high-level synthesis of asynchronous circuits is syntax directed translation, which performs a one-to-one mapping of a HDL-description into a corresponding circuit. This paper presents a method for behavioral synthesis of asynchronous circuits which builds on top...... of syntax directed translation, and which allows the designer to perform automatic design space exploration guided by area or speed constraints. The paper presents an asynchronous implementation template consisting of a data-path and a control unit and its implementation using the asynchronous hardware...

  5. a Beat Perioid Observation of the Asynchronous Polar by Cam.

    Science.gov (United States)

    Rainger, Jonathan

    We propose to observe the hard X-ray bright asynchronous polar BY Cam throughout its beat cycle in order to investigate the changes in the magnetic capture of the accretion stream as the secondary star changes in azimuth with respect to the white dwarf. Regular snap-shots of the light curve will reveal the order behind the chaos. Previous observations have been taken in 3 days or less, our monitoring plan over 21 days offers the only real hope of understanding these difficult systems.

  6. Creating video-annotated discussions: An asynchronous alternative

    Directory of Open Access Journals (Sweden)

    Craig D. Howard

    2010-01-01

    Full Text Available In this article the authors illustrate the design and development of a pedagogical intervention using video annotations in a pre-service teacher education courrse. An annotation platform was selected and video was shot to create a video backdrop on which asynchronous discussions would take place. The article addresses design considerations in the selection of video, the editing process, and the development of a tutorial to lead learners through their first experience with this form of discussion. Learner participation samples were collected, and an analysis of the design process concludes the article.

  7. Positive semidefinite integrated covariance estimation, factorizations and asynchronicity

    DEFF Research Database (Denmark)

    Sauri, Orimar; Lunde, Asger; Laurent, Sébastien

    2017-01-01

    An estimator of the ex-post covariation of log-prices under asynchronicity and microstructure noise is proposed. It uses the Cholesky factorization of the covariance matrix in order to exploit the heterogeneity in trading intensities to estimate the different parameters sequentially with as many...... observations as possible. The estimator is positive semidefinite by construction. We derive asymptotic results and confirm their good finite sample properties by means of a Monte Carlo simulation. In the application we forecast portfolio Value-at-Risk and sector risk exposures for a portfolio of 52 stocks. We...

  8. The braided Ptolemy-Thompson group $T^*$ is asynchronously combable

    OpenAIRE

    Funar, Louis; Kapoudjian, Christophe

    2006-01-01

    The braided Ptolemy-Thompson group $T^*$ is an extension of the Thompson group $T$ by the full braid group $B_{\\infty}$ on infinitely many strands. This group is a simplified version of the acyclic extension considered by Greenberg and Sergiescu, and can be viewed as a mapping class group of a certain infinite planar surface. In a previous paper we showed that $T^*$ is finitely presented. Our main result here is that $T^*$ (and $T$) is asynchronously combable. The method of proof is inspired ...

  9. The parallel evolution of immunology and pharmacology.

    Science.gov (United States)

    Conti, A A

    2010-01-01

    Immunology is the systematic evaluation of the means through which human beings protect themselves and respond to the attack of internal and external agents, and Edward Jenner (1749-1823) and Louis Pasteur (1822-1895) are considered pioneers of this field. Jenner observed the protective effect of cowpox against smallpox and inoculated the cowpox in human beings to protect them from the often lethal smallpox. Pasteur developed in his laboratory a vaccine against rabies and elaborated methods for attenuating the virulence of pathogenic microorganisms while maintaining their immunogenicity. Pharmacology is the area of medical science dealing with drugs and their uses, and it was during the nineteenth century that it assumed its status of scientific specialty, mainly in German-speaking Europe, through the establishment of pharmacological institutes and dedicated laboratories. The discovery and the synthesis of drugs and the systematic evaluation of their activity have constituted through time a scientific field in which immunology and pharmacology have met and given origin to notable progress in the history of science. The development of chemotherapy, as well as of organ and tissue transplantation, in the twentieth century has been decisively promoted by both immunology and pharmacology. In the last three decades the relationship between these two scientific branches has become increasingly closer in basic research, clinical science, medical education and also editorial scientific activity, as documented by the Journal hosting this paper.

  10. A Scheduling Discipline for Latency and Bandwidth Guarantees in Asynchronous Network-on-Chip

    DEFF Research Database (Denmark)

    Bjerregaard, Tobias; Sparsø, Jens

    2005-01-01

    Guaranteed services (GS) are important in that they provide predictability in the complex dynamics of shared communication structures. This paper discusses the implementation of GS in asynchronous Network-on-Chip. We present a novel scheduling discipline called Asynchronous Latency Guarantee (ALG...

  11. Adding effect of current displacement and magnetic circuit saturation in an asynchronous motor mathematical model

    Directory of Open Access Journals (Sweden)

    I.A. Tsodik

    2014-04-01

    Full Text Available A methodology of an asynchronous motor mathematical model synthesis is described. Experiments are suggested to be conducted in the following sequence. Geometrical models are first built in AutoCAD, then imported to Comsol Multiphysics, and further processed in Matlab with computation of coefficients and dependences applied in the asynchronous motor mathematical model.

  12. Using Television Sitcoms to Facilitate Asynchronous Discussions in the Online Communication Course

    Science.gov (United States)

    Tolman, Elizabeth; Asbury, Bryan

    2012-01-01

    Asynchronous discussions are a useful instructional resource in the online communication course. In discussion groups students have the opportunity to actively participate and interact with students and the instructor. Asynchronous communication allows for flexibility because "participants can interact with significant amounts of time between…

  13. Analysing High School Students' Participation and Interaction in an Asynchronous Online Project-Based Learning Environment

    Science.gov (United States)

    Lang, Quek Choon

    2010-01-01

    This study aims to replicate and extend a previous study which was conducted on primary school students' asynchronous online project-based learning. In this study, 276 high school students' participation and interaction in a project-based learning environment was mediated by an asynchronous computer-mediated communication (CMC) tool. The students'…

  14. Experience with synchronous and asynchronous digital control systems

    Science.gov (United States)

    Regenie, V. A.; Chacon, C. V.; Lock, W. P.

    1986-01-01

    Flight control systems have undergone a revolution since the days of simple mechanical linkages; presently the most advanced systems are full-authority, full-time digital systems controlling unstable aircraft. With the use of advanced control systems, the aerodynamic design can incorporate features that allow greater performance and fuel savings, as can be seen on the new Airbus design and advanced tactical fighter concepts. These advanced aircraft will be and are relying on the flight control system to provide the stability and handling qualities required for safe flight and to allow the pilot to control the aircraft. Various design philosophies have been proposed and followed to investigate system architectures for these advanced flight control systems. One major area of discussion is whether a multichannel digital control system should be synchronous or asynchronous. This paper addressed the flight experience at the Dryden Flight Research Facility of NASA's Ames Research Center with both synchronous and asynchronous digital flight control systems. Four different flight control systems are evaluated against criteria such as software reliability, cost increases, and schedule delays.

  15. Experience with synchronous and asynchronous digital control systems. [for flight

    Science.gov (United States)

    Regenie, Victoria A.; Chacon, Claude V.; Lock, Wilton P.

    1986-01-01

    Flight control systems have undergone a revolution since the days of simple mechanical linkages; presently the most advanced systems are full-authority, full-time digital systems controlling unstable aircraft. With the use of advanced control systems, the aerodynamic design can incorporate features that allow greater performance and fuel savings, as can be seen on the new Airbus design and advanced tactical fighter concepts. These advanced aircraft will be and are relying on the flight control system to provide the stability and handling qualities required for safe flight and to allow the pilot to control the aircraft. Various design philosophies have been proposed and followed to investigate system architectures for these advanced flight control systems. One major area of discussion is whether a multichannel digital control system should be synchronous or asynchronous. This paper addressed the flight experience at the Dryden Flight Research Facility of NASA's Ames Research Center with both synchronous and asynchronous digital flight control systems. Four different flight control systems are evaluated against criteria such as software reliability, cost increases, and schedule delays.

  16. The Role of Online Instructors in Asynchronous Discussion Forums

    Science.gov (United States)

    Maddison, Sarah T.; Mazzolini, M. M.; Gay, P. L.

    2007-05-01

    We present qualitative results and advice on the role of online instructors in asynchronous discussion forums and the technologies used to support online interactive learning. Results are based on six years of designing, coordinating, evaluating and teaching into the distance learning program Swinburne Astronomy Online. We discuss why we chose to use asynchronous rather than synchronous discussion forums and how we have implemented them; how we train our online instructors and their role as a 'guide on the side'; techniques for moderating the volume of forum postings while ensuring a constructive learning environment; and methods for dealing with both mixed class preparedness and 'challenging' students within an online environment. Our research into the interaction between students and instructors in online forums provides some interesting (and often counter-intuitive) insights into the relationship between the number and length of student postings and the posting patterns of their instructors. We compare these results with qualitative feedback from both students and instructors on their perception of the online learning and teaching experience.

  17. Formation of the wide asynchronous binary asteroid population

    Energy Technology Data Exchange (ETDEWEB)

    Jacobson, Seth A. [Department of Astrophysical and Planetary Science, UCB 391, University of Colorado, Boulder, CO 80309 (United States); Scheeres, Daniel J.; McMahon, Jay [Department of Aerospace Engineering Sciences, UCB 429, University of Colorado, Boulder, CO 80309 (United States)

    2014-01-01

    We propose and analyze a new mechanism for the formation of the wide asynchronous binary population. These binary asteroids have wide semimajor axes relative to most near-Earth and main belt asteroid systems. Confirmed members have rapidly rotating primaries and satellites that are not tidally locked. Previously suggested formation mechanisms from impact ejecta, from planetary flybys, and directly from rotational fission events cannot satisfy all of the observations. The newly hypothesized mechanism works as follows: (1) these systems are formed from rotational fission, (2) their satellites are tidally locked, (3) their orbits are expanded by the binary Yarkovsky-O'Keefe-Radzievskii-Paddack (BYORP) effect, (4) their satellites desynchronize as a result of the adiabatic invariance between the libration of the secondary and the mutual orbit, and (5) the secondary avoids resynchronization because of the YORP effect. This seemingly complex chain of events is a natural pathway for binaries with satellites that have particular shapes, which define the BYORP effect torque that acts on the system. After detailing the theory, we analyze each of the wide asynchronous binary members and candidates to assess their most likely formation mechanism. Finally, we suggest possible future observations to check and constrain our hypothesis.

  18. An Asynchronous IEEE Floating-Point Arithmetic Unit

    Directory of Open Access Journals (Sweden)

    Joel R. Noche

    2007-12-01

    Full Text Available An asynchronous floating-point arithmetic unit is designed and tested at the transistor level usingCadence software. It uses CMOS (complementary metal oxide semiconductor and DCVS (differentialcascode voltage switch logic in a 0.35 µm process using a 3.3 V supply voltage, with dual-rail data andsingle-rail control signals using four-phase handshaking.Using 17,085 transistors, the unit handles single-precision (32-bit addition/subtraction, multiplication,division, and remainder using the IEEE 754-1985 Standard for Binary Floating-Point Arithmetic, withrounding and other operations to be handled by separate hardware or software. Division and remainderare done using a restoring subtractive algorithm; multiplication uses an additive algorithm. Exceptionsare noted by flags (and not trap handlers and the output is in single-precision.Previous work on asynchronous floating-point arithmetic units have mostly focused on single operationssuch as division. This is the first work to the authors' knowledge that can perform floating-point addition,multiplication, division, and remainder using a common datapath.

  19. Asynchronous Detection of Trials Onset from Raw EEG Signals.

    Science.gov (United States)

    Lopez-Gordo, M A; Grima Murcia, M D; Padilla, Pablo; Pelayo, F; Fernandez, E

    2016-11-01

    Clinical processing of event-related potentials (ERPs) requires a precise synchrony between the stimulation and the acquisition units that are guaranteed by means of a physical link between them. This precise synchrony is needed since temporal misalignments during trial averaging can lead to high deviations of peak times, thus causing error in diagnosis or inefficiency in classification in brain-computer interfaces (BCIs). Out of the laboratory, mobile EEG systems and BCI headsets are not provided with the physical link, thus being inadequate for acquisition of ERPs. In this study, we propose a method for the asynchronous detection of trials onset from raw EEG without physical links. We validate it with a BCI application based on the dichotic listening task. The user goal was to attend the cued auditory message and to report three keywords contained in it while ignoring the other message. The BCI goal was to detect the attended message from the analysis of auditory ERPs. The rate of successful onset detection in both synchronous (using the real onset) and asynchronous (blind detection of trial onset from raw EEG) was 73% with a synchronization error of less than 1[Formula: see text]ms. The level of synchronization provided by this proposal would allow home-based acquisition of ERPs with low cost BCI headsets and any media player unit without physical links between them.

  20. Asynchronous Task-Based Polar Decomposition on Manycore Architectures

    KAUST Repository

    Sukkari, Dalal

    2016-10-25

    This paper introduces the first asynchronous, task-based implementation of the polar decomposition on manycore architectures. Based on a new formulation of the iterative QR dynamically-weighted Halley algorithm (QDWH) for the calculation of the polar decomposition, the proposed implementation replaces the original and hostile LU factorization for the condition number estimator by the more adequate QR factorization to enable software portability across various architectures. Relying on fine-grained computations, the novel task-based implementation is also capable of taking advantage of the identity structure of the matrix involved during the QDWH iterations, which decreases the overall algorithmic complexity. Furthermore, the artifactual synchronization points have been severely weakened compared to previous implementations, unveiling look-ahead opportunities for better hardware occupancy. The overall QDWH-based polar decomposition can then be represented as a directed acyclic graph (DAG), where nodes represent computational tasks and edges define the inter-task data dependencies. The StarPU dynamic runtime system is employed to traverse the DAG, to track the various data dependencies and to asynchronously schedule the computational tasks on the underlying hardware resources, resulting in an out-of-order task scheduling. Benchmarking experiments show significant improvements against existing state-of-the-art high performance implementations (i.e., Intel MKL and Elemental) for the polar decomposition on latest shared-memory vendors\\' systems (i.e., Intel Haswell/Broadwell/Knights Landing, NVIDIA K80/P100 GPUs and IBM Power8), while maintaining high numerical accuracy.

  1. Asynchronous cracking with dissimilar paths in multilayer graphene.

    Science.gov (United States)

    Jang, Bongkyun; Kim, Byungwoon; Kim, Jae-Hyun; Lee, Hak-Joo; Sumigawa, Takashi; Kitamura, Takayuki

    2017-11-16

    Multilayer graphene consists of a stack of single-atomic-thick monolayer graphene sheets bound with π-π interactions and is a fascinating model material opening up a new field of fracture mechanics. In this study, fracture behavior of single-crystalline multilayer graphene was investigated using an in situ mode I fracture test under a scanning electron microscope, and abnormal crack propagation in multilayer graphene was identified for the first time. The fracture toughness of graphene was determined from the measured load-displacement curves and the realistic finite element modelling of specimen geometries. Nonlinear fracture behavior of the multilayer graphene is discussed based on nonlinear elastic fracture mechanics. In situ scanning electron microscope images obtained during the fracture test showed asynchronous crack propagation along independent paths, causing interlayer shear stress and slippages. We also found that energy dissipation by interlayer slippages between the graphene layers is the reason for the enhanced fracture toughness of multilayer graphene. The asynchronous cracking with independent paths is a unique cracking and toughening mechanism for single-crystalline multilayer graphene, which is not observed for the monolayer graphene. This could provide a useful insight for the design and development of graphene-based composite materials for structural applications.

  2. Asynchronously sampled blind source separation for coherent optical links

    Science.gov (United States)

    Detwiler, Thomas F.; Searcy, Steven M.; Stark, Andrew J.; Ralph, Stephen E.; Basch, Bert E.

    2011-01-01

    Polarization multiplexing is an integral technique for generating spectrally efficient 100 Gb/s and higher optical links. Post coherent detection DSP-based polarization demultiplexing of QPSK links is commonly performed after timing recovery. We propose and demonstrate a method of asynchronous blind source separation using the constant modulus algorithm (CMA) on the asynchronously sampled signal to initially separate energy from arbitrarily aligned polarization states. This method lends well to implementation as it allows for an open-loop sampling frequency for analog-to-digital conversion at less than twice the symbol rate. We show that the performance of subsequent receiver functions is enhanced by the initial pol demux operation. CMA singularity behavior is avoided through tap settling constraints. The method is applicable to QPSK transmissions and many other modulation formats as well, including general QAM signals, offset-QPSK, and CPM, or a combination thereof. We present the architecture and its performance under several different formats and link conditions. Comparisons of complexity and performance are drawn between the proposed architecture and conventional receivers.

  3. Emergence of Asynchronous Local Clocks in Excitable Media.

    Science.gov (United States)

    Gerum, Richard Carl; Fabry, Ben; Metzner, Claus

    2015-01-01

    Excitable media such as the myocardium or the brain consist of arrays of coupled excitable elements, in which the local excitation of a single element can propagate to its neighbors in the form of a non-linear autowave. Since each element has to pass through a refractory period immediately after excitation, the frequency of autowaves is self-limiting. In this work, we consider the case where each element is spontaneously excited at a fixed average rate and thereby initiates a new autowave. Although these spontaneous self-excitation events are modelled as independent Poisson point processes with exponentially distributed waiting times, the travelling autowaves lead collectively to a non-exponential, unimodal waiting time distribution for the individual elements. With increasing system size, a global 'clock' period T emerges as the most probable waiting time for each element, which fluctuates around T with an increasingly small but non-zero variance. This apparent synchronization between asynchronous, temporally uncorrelated point processes differs from synchronization effects between perfect oscillators interacting in a phase-aligning manner. Finally, we demonstrate that asynchronous local clocks also emerge in non-homogeneous systems in which the rates of self-excitation are different for all individuals, suggesting that this novel mechanism can occur in a wide range of excitable media.

  4. Spatiotemporal Features for Asynchronous Event-based Data

    Directory of Open Access Journals (Sweden)

    Xavier eLagorce

    2015-02-01

    Full Text Available Bio-inspired asynchronous event-based vision sensors are currently introducing a paradigm shift in visual information processing. These new sensors rely on a stimulus-driven principle of light acquisition similar to biological retinas. They are event-driven and fully asynchronous, thereby reducing redundancy and encoding exact times of input signal changes, leading to a very precise temporal resolution. Approaches for higher-level computer vision often rely on the realiable detection of features in visual frames, but similar definitions of features for the novel dynamic and event-based visual input representation of silicon retinas have so far been lacking. This article addresses the problem of learning and recognizing features for event-based vision sensors, which capture properties of truly spatiotemporal volumes of sparse visual event information. A novel computational architecture for learning and encoding spatiotemporal features is introduced based on a set of predictive recurrent reservoir networks, competing via winner-take-all selection. Features are learned in an unsupervised manner from real-world input recorded with event-based vision sensors. It is shown that the networks in the architecture learn distinct and task-specific dynamic visual features, and can predict their trajectories over time.

  5. Parallel Programming with Intel Parallel Studio XE

    CERN Document Server

    Blair-Chappell , Stephen

    2012-01-01

    Optimize code for multi-core processors with Intel's Parallel Studio Parallel programming is rapidly becoming a "must-know" skill for developers. Yet, where to start? This teach-yourself tutorial is an ideal starting point for developers who already know Windows C and C++ and are eager to add parallelism to their code. With a focus on applying tools, techniques, and language extensions to implement parallelism, this essential resource teaches you how to write programs for multicore and leverage the power of multicore in your programs. Sharing hands-on case studies and real-world examples, the

  6. Asynchronous neuro-osseous growth in adolescent idiopathic scoliosis - MRI-based research

    Energy Technology Data Exchange (ETDEWEB)

    Chu, Winnie C.W.; Rasalkar, Darshana D. [The Chinese University of Hong Kong, Department of Diagnostic Radiology and Organ Imaging, Hong Kong, SAR (China); Cheng, Jack C.Y. [The Chinese University of Hong Kong, Department of Orthopaedics and Traumatology, Hong Kong, SAR (China)

    2011-09-15

    Adolescent idiopathic scoliosis (AIS) is a common worldwide problem and has been treated for many decades; however, there still remain uncertain areas about this disorder. Its involvement and impact on different parts of the human body remain underestimated due to lack of technology in imaging for objective assessment in the past. The advances in imaging technique and image analysis technology have provided a novel approach for the understanding of the phenotypic presentation of neuro-osseous changes in AIS patients as compared with normal controls. This review is the summary of morphological assessment of the skeletal and nervous systems in girls with AIS based on MRI. Girls with AIS are found to have morphological differences in multiple areas including the vertebral column, spinal cord, skull and brain when compared with age- and sex-matched normal controls. Taken together, the abnormalities in the skeletal system and nervous system of AIS are likely to be inter-related and reflect a systemic process of asynchronous neuro-osseous growth. The current knowledge about the anatomical changes in AIS has important implications with respect to the understanding of fundamental pathomechanical processes involved in the evolution of the scoliotic deformity. (orig.)

  7. Parallel sorting algorithms

    CERN Document Server

    Akl, Selim G

    1985-01-01

    Parallel Sorting Algorithms explains how to use parallel algorithms to sort a sequence of items on a variety of parallel computers. The book reviews the sorting problem, the parallel models of computation, parallel algorithms, and the lower bounds on the parallel sorting problems. The text also presents twenty different algorithms, such as linear arrays, mesh-connected computers, cube-connected computers. Another example where algorithm can be applied is on the shared-memory SIMD (single instruction stream multiple data stream) computers in which the whole sequence to be sorted can fit in the

  8. Practical parallel computing

    CERN Document Server

    Morse, H Stephen

    1994-01-01

    Practical Parallel Computing provides information pertinent to the fundamental aspects of high-performance parallel processing. This book discusses the development of parallel applications on a variety of equipment.Organized into three parts encompassing 12 chapters, this book begins with an overview of the technology trends that converge to favor massively parallel hardware over traditional mainframes and vector machines. This text then gives a tutorial introduction to parallel hardware architectures. Other chapters provide worked-out examples of programs using several parallel languages. Thi

  9. Parallel programming with Easy Java Simulations

    Science.gov (United States)

    Esquembre, F.; Christian, W.; Belloni, M.

    2018-01-01

    Nearly all of today's processors are multicore, and ideally programming and algorithm development utilizing the entire processor should be introduced early in the computational physics curriculum. Parallel programming is often not introduced because it requires a new programming environment and uses constructs that are unfamiliar to many teachers. We describe how we decrease the barrier to parallel programming by using a java-based programming environment to treat problems in the usual undergraduate curriculum. We use the easy java simulations programming and authoring tool to create the program's graphical user interface together with objects based on those developed by Kaminsky [Building Parallel Programs (Course Technology, Boston, 2010)] to handle common parallel programming tasks. Shared-memory parallel implementations of physics problems, such as time evolution of the Schrödinger equation, are available as source code and as ready-to-run programs from the AAPT-ComPADRE digital library.

  10. An Asynchronous Cellular Automata-Based Adaptive Illumination Facility

    Science.gov (United States)

    Bandini, Stefania; Bonomi, Andrea; Vizzari, Giuseppe; Acconci, Vito

    The term Ambient Intelligence refers to electronic environments that are sensitive and responsive to the presence of people; in the described scenario the environment itself is endowed with a set of sensors (to perceive humans or other physical entities such as dogs, bicycles, etc.), interacting with a set of actuators (lights) that choose their actions (i.e. state of illumination) in an attempt improve the overall experience of these users. The model for the interaction and action of sensors and actuators is an asynchronous Cellular Automata (CA) with memory, supporting a self-organization of the system as a response to the presence and movements of people inside it. The paper will introduce the model, as well as an ad hoc user interface for the specification of the relevant parameters of the CA transition rule that determines the overall system behaviour.

  11. Research on the displacement control method of asynchronous modular contactor

    Science.gov (United States)

    He, Gong; Ming, Zong

    2017-01-01

    Ac contactor is a kind of low voltage electrical appliances with large usage and wide application. Because of the frequent operation, contactor life must be long enough to ensure the reliable operation of power system. The electrical life of the contactor, as the key to affect the service life of the contactor, is mainly affected by the arc developed in the breaking and closing course. This paper concentrates on a new type of asynchronous modular contactor. To get the contactor movement characteristics, the dynamic model of the electromagnetic system is established by MATLAB/SIMULINK. Then, according to the displacement curve of contactor, the breaking process and closing process is planned. The thought of closed loop control, by adjusting the parameters of PID controller, enables the contactor to operate as the planning displacement curve. In addition, to achieve no arc or micro arc breaking and no bounce or micro bounce closing , a displacement closed loop control system for contactor is designed.

  12. Label-acquired magnetorotation for biosensing: An asynchronous rotation assay

    Energy Technology Data Exchange (ETDEWEB)

    Hecht, Ariel, E-mail: hecht@umich.ed [University of Michigan, Department of Biomedical Engineering, 2200 Bonisteel, Ann Arbor, MI 48109-2099 (United States); University of Michigan, Department of Chemistry, 930 North University, Ann Arbor, MI 48109-1055 (United States); Kinnunen, Paivo, E-mail: pkkinn@umich.ed [University of Michigan, Department of Chemistry, 930 North University, Ann Arbor, MI 48109-1055 (United States); University of Michigan, Applied Physics Program, 2477 Randall Laboratory, Ann Arbor, MI 48109-1120 (United States); McNaughton, Brandon, E-mail: bmcnaugh@umich.ed [University of Michigan, Department of Biomedical Engineering, 2200 Bonisteel, Ann Arbor, MI 48109-2099 (United States); University of Michigan, Department of Chemistry, 930 North University, Ann Arbor, MI 48109-1055 (United States); University of Michigan, Applied Physics Program, 2477 Randall Laboratory, Ann Arbor, MI 48109-1120 (United States); Kopelman, Raoul, E-mail: kopelman@umich.ed [University of Michigan, Department of Biomedical Engineering, 2200 Bonisteel, Ann Arbor, MI 48109-2099 (United States); University of Michigan, Department of Chemistry, 930 North University, Ann Arbor, MI 48109-1055 (United States); University of Michigan, Applied Physics Program, 2477 Randall Laboratory, Ann Arbor, MI 48109-1120 (United States)

    2011-02-15

    This paper presents a novel application of magnetic particles for biosensing, called label-acquired magnetorotation (LAM). This method is based on a combination of the traditional sandwich assay format with the asynchronous magnetic bead rotation (AMBR) method. In label-acquired magnetorotation, an analyte facilitates the binding of a magnetic label bead to a nonmagnetic solid phase sphere, forming a sandwich complex. The sandwich complex is then placed in a rotating magnetic field, where the rotational frequency of the sandwich complex is a function of the amount of analyte attached to the surface of the sphere. Here, we use streptavidin-coated beads and biotin-coated particles as analyte mimics, to be replaced by proteins and other biological targets in future work. We show this sensing method to have a dynamic range of two orders of magnitude.

  13. Estimation of delays in generalized asynchronous Boolean networks.

    Science.gov (United States)

    Das, Haimabati; Layek, Ritwik Kumar

    2016-10-20

    A new generalized asynchronous Boolean network (GABN) model has been proposed in this paper. This continuous-time discrete-state model captures the biological reality of cellular dynamics without compromising the computational efficiency of the Boolean framework. The GABN synthesis procedure is based on the prior knowledge of the logical structure of the regulatory network, and the experimental transcriptional parameters. The novelty of the proposed methodology lies in considering different delays associated with the activation and deactivation of a particular protein (especially the transcription factors). A few illustrative examples of some well-studied network motifs have been provided to explore the scope of using the GABN model for larger networks. The GABN model of the p53-signaling pathway in response to γ-irradiation has also been simulated in the current paper to provide an indirect validation of the proposed schema.

  14. H∞ Controller Design for Asynchronous Hybrid Systems with Multiple Delays

    Directory of Open Access Journals (Sweden)

    Xiaoqiang Sun

    2016-01-01

    Full Text Available Solutions for the H∞ synthesis problems of asynchronous hybrid systems with input-output delays are proposed. The continuous-time lifting approach of sampled-data systems is extended to a hybrid system with multiple delays, and some feasible formulas to calculate the operators of the equivalent discrete-time (DT system are given. Different from the existing methods derived from symplectic pair theory or by state augmentation, a Lyapunov-Krasovskii functional to solve the synthesis problem is explicitly constructed. The delay-dependent stability conditions we obtained can be described in terms of nonstrict linear matrix inequalities (LMIs, which are much more convenient to be solved by LMI tools.

  15. Indoor Positioning for Smartphones Using Asynchronous Ultrasound Trilateration

    Directory of Open Access Journals (Sweden)

    James D. Carswell

    2013-06-01

    Full Text Available Modern smartphones are a great platform for Location Based Services (LBS. While outdoor LBS for smartphones has proven to be very successful, indoor LBS for smartphones has not yet fully developed due to the lack of an accurate positioning technology. In this paper we present an accurate indoor positioning approach for commercial off-the-shelf (COTS smartphones that uses the innate ability of mobile phones to produce ultrasound, combined with Time-Difference-of-Arrival (TDOA asynchronous trilateration. We evaluate our indoor positioning approach by describing its strengths and weaknesses, and determine its absolute accuracy. This is accomplished through a range of experiments that involve variables such as position of control point microphones, position of phone within the room, direction speaker is facing and presence of user in the signal path. Test results show that our Lok8 (locate mobile positioning system can achieve accuracies better than 10 cm in a real-world environment.

  16. Realization of station for testing asynchronous three-phase motors

    Science.gov (United States)

    Wróbel, A.; Surma, W.

    2016-08-01

    Nowadays, you cannot imagine the construction and operation of machines without the use of electric motors [13-15]. The proposed position is designed to allow testing of asynchronous three-phase motors. The position consists of a tested engine and the engine running as a load, both engines combined with a mechanical clutch [2]. The value of the load is recorded by measuring shaft created with Strain Gauge Bridge. This concept will allow to study the basic parameters of the engines, visualization motor parameters both vector and scalar controlled, during varying load drive system. In addition, registration during the variable physical parameters of the working electric motor, controlled by a frequency converter or controlled by a contactor will be possible. Position is designed as a teaching and research position to characterize the engines. It will be also possible selection of inverter parameters.

  17. Vector control structure of an asynchronous motor at maximum torque

    Science.gov (United States)

    Chioncel, C. P.; Tirian, G. O.; Gillich, N.; Raduca, E.

    2016-02-01

    Vector control methods offer the possibility to gain high performance, being widely used. Certain applications require an optimum control in limit operating conditions, as, at maximum torque, that is not always satisfied. The paper presents how the voltage and the frequency for an asynchronous machine (ASM) operating at variable speed are determinate, with an accent on the method that keeps the rotor flux constant. The simulation analyses consider three load types: variable torque and speed, variable torque and constant speed, constant torque and variable speed. The final values of frequency and voltage are obtained through the proposed control schemes with one controller using the simulation language based on the Maple module. The dynamic analysis of the system is done for the case with P and PI controller and allows conclusions on the proposed method, which can have different applications, as the ASM in wind turbines.

  18. Graduate Students' Experiences of Challenges in Online Asynchronous Discussions

    Directory of Open Access Journals (Sweden)

    Elizabeth Murphy

    2004-06-01

    Full Text Available This paper presents one of five categories of findings of a qualitative study of students' experiences of challenges encountered in a web-based graduate program. The findings relate to the category of experiences with online asynchronous discussions. Data collection relied on a discussion, questionnaire and interview all conducted within WebCTTM. The category's findings were grouped into four sub-categories of challenges as follows: student behaviour; text-only, online communication; purpose and quality of the discussion; and forum features. Challenges related to students' behaviour included domination of the discussion by individual students or groups of students resulting in feelings of exclusion, frustration and inadequacy. Text-only communication caused difficulties related to misinterpretation and conveying and deriving intent. Challenges related to the purpose and value of the discussion resulted from low quality and high quantities of postings to meet grade requirements. Technical features that presented challenges included the inability to delete messages.

  19. Blow Flies Visiting Decaying Alligators: Is Succession Synchronous or Asynchronous?

    Directory of Open Access Journals (Sweden)

    Mark P. Nelder

    2009-01-01

    Full Text Available Succession patterns of adult blow flies (Diptera: Calliphoridae on decaying alligators were investigated in Mobile (Ala, USA during August 2002. The most abundant blow fly species visiting the carcasses were Chrysomya rufifacies (Macquart, Cochliomyia macellaria (Fabricus, Chrysomya megacephala (Fabricus, Phormia regina (Meigen, and Lucilia coeruleiviridis (Macquart. Lucilia coeruleiviridis was collected more often during the early stages of decomposition, followed by Chrysomya spp., Cochliomyia macellaria, and Phormia regina in the later stages. Lucilia coeruleiviridis was the only synchronous blow fly on the three carcasses; other blow fly species exhibited only site-specific synchrony. Using dichotomous correlations and analyses of variance, we demonstrated that blow fly-community succession was asynchronous among three alligators; however, Monte Carlo simulations indicate that there was some degree of synchrony between the carcasses.

  20. Asynchronous machine rotor speed estimation using a tabulated numerical approach

    Science.gov (United States)

    Nguyen, Huu Phuc; De Miras, Jérôme; Charara, Ali; Eltabach, Mario; Bonnet, Stéphane

    2017-12-01

    This paper proposes a new method to estimate the rotor speed of the asynchronous machine by looking at the estimation problem as a nonlinear optimal control problem. The behavior of the nonlinear plant model is approximated off-line as a prediction map using a numerical one-step time discretization obtained from simulations. At each time-step, the speed of the induction machine is selected satisfying the dynamic fitting problem between the plant output and the predicted output, leading the system to adopt its dynamical behavior. Thanks to the limitation of the prediction horizon to a single time-step, the execution time of the algorithm can be completely bounded. It can thus easily be implemented and embedded into a real-time system to observe the speed of the real induction motor. Simulation results show the performance and robustness of the proposed estimator.

  1. Asynchronous Messaging and Data Transfer in a Spacecraft: An Implementation

    Science.gov (United States)

    Moholt, Joseph M.

    2005-01-01

    Data transfer and messaging is an important part of a spacecraft. Creating a standard protocol for messaging that can be used for a variety of applications is an extremely beneficial project at the Jet Propulsion Laboratory (JPL). The Asynchronous Messaging Service (AMS) is a protocol outlining how subsystems initialize and conduct communication between each other. There are currently two implementations of AMS in the works. At JPL, my task is to get a working implementation of AMS onto vxWorks as a proof of concept. An Autocoder, a program used to convert visually created state chart diagrams to C++, has also been created to accomplish a part of the implementation. I was assigned to make the program portable on any Unix type environment. Lastly, I was to develop a program to demonstrate messaging between two FireWire cards running vxworks.

  2. Reliable Asynchronous Image Transfer Protocol in Wireless Multimedia Sensor Networks

    Directory of Open Access Journals (Sweden)

    In-Bum Jung

    2010-02-01

    Full Text Available In the paper, we propose a reliable asynchronous image transfer protocol, RAIT. RAIT applies a double sliding window method to node-to-node transfer, with one sliding window for the receiving queue, which is used to prevent packet loss caused by communication failure between nodes, and another sliding window for the sending queue, which prevents packet loss caused by network congestion. The routing node prevents packet loss between nodes by preemptive scheduling of multiple packets for a given image. RAIT implements a double sliding window method by means of a cross-layer design between the RAIT layer, routing layer, and queue layer. We demonstrate that RAIT guarantees a higher reliability of image transmission compared to the existing protocols.

  3. Reliable asynchronous image transfer protocol in wireless multimedia sensor networks.

    Science.gov (United States)

    Lee, Joa-Hyoung; Jung, In-Bum

    2010-01-01

    In the paper, we propose a reliable asynchronous image transfer protocol, RAIT. RAIT applies a double sliding window method to node-to-node transfer, with one sliding window for the receiving queue, which is used to prevent packet loss caused by communication failure between nodes, and another sliding window for the sending queue, which prevents packet loss caused by network congestion. The routing node prevents packet loss between nodes by preemptive scheduling of multiple packets for a given image. RAIT implements a double sliding window method by means of a cross-layer design between the RAIT layer, routing layer, and queue layer. We demonstrate that RAIT guarantees a higher reliability of image transmission compared to the existing protocols.

  4. ISP: an optimal out-of-core image-set processing streaming architecture for parallel heterogeneous systems.

    Science.gov (United States)

    Ha, Linh Khanh; Krüger, Jens; Dihl Comba, João Luiz; Silva, Cláudio T; Joshi, Sarang

    2012-06-01

    Image population analysis is the class of statistical methods that plays a central role in understanding the development, evolution, and disease of a population. However, these techniques often require excessive computational power and memory that are compounded with a large number of volumetric inputs. Restricted access to supercomputing power limits its influence in general research and practical applications. In this paper we introduce ISP, an Image-Set Processing streaming framework that harnesses the processing power of commodity heterogeneous CPU/GPU systems and attempts to solve this computational problem. In ISP, we introduce specially designed streaming algorithms and data structures that provide an optimal solution for out-of-core multiimage processing problems both in terms of memory usage and computational efficiency. ISP makes use of the asynchronous execution mechanism supported by parallel heterogeneous systems to efficiently hide the inherent latency of the processing pipeline of out-of-core approaches. Consequently, with computationally intensive problems, the ISP out-of-core solution can achieve the same performance as the in-core solution. We demonstrate the efficiency of the ISP framework on synthetic and real datasets.

  5. Asynchronous learning: student utilization out of sync with their preference

    Directory of Open Access Journals (Sweden)

    Edward K. Lew

    2016-06-01

    Full Text Available Background: Asynchronous learning is gaining popularity. Data are limited regarding this learning method in medical students rotating in emergency medicine (EM. In EM, faculty time is limited to give in-person lectures. The authors sought to create an online curriculum that students could utilize as an additional learning modality. Objective: The goal was to evaluate effectiveness, participation, and preference for this mode of learning. Methods: We developed five online, narrated PowerPoint presentations. After orientation, access to the online curriculum was provided to the students, which they could review at their leisure. Results: One hundred and seven fourth-year medical students participated. They reported the curriculum to be of high quality. Pretest scores were similar for those that viewed all lectures – compliant group (CG (9.5 [CI 4.8–14.1] and those that did not view any – non-compliant group (NCG (9.6 [CI 5.9–13.4]. There was no statistical significant difference in posttest scores between the groups although there was improvement overall: CG 14.6 (CI 6.9–22.1; NCG 11.4 (CI 5.7–17.1. A majority (69.2% favored inclusion of asynchronous learning, but less than a quarter (22.4% reported viewing all five modules and more than a third (36.4% viewed none. Conclusion: Despite student-expressed preference for an online curriculum, they used the online resource less than expected. This should give pause to educators looking to convert core EM topics to an online format. However, when high-quality online lectures are utilized as a learning tool, this study demonstrates that they had neither a positive nor a negative impact on test scores.

  6. Stability and vibrations of doubly parallel current-carrying nanowires immersed in a longitudinal magnetic field

    Energy Technology Data Exchange (ETDEWEB)

    Kiani, Keivan, E-mail: k_kiani@kntu.ac.ir

    2015-02-06

    This paper deals with dynamic interactions of two parallel nanowires carrying electric currents in the presence of a longitudinal magnetic field. Using Biot–Savart law and a surface elasticity model, the equations of motion are obtained. Accounting for both Lorentz and gravity forces, the static and the purely dynamic parts of the total displacements of the nanosystem are explicitly expressed. Two crucial modes of vibration, synchronous and asynchronous patterns, are identified and their characteristics are inclusively explained. It is shown that the nanosystem becomes dynamically unstable under certain conditions in the asynchronous mode. The minimum initial tensile force as well as the maximum values of the electric current and the magnetic field strength corresponding to the dynamic instability are derived. The roles of the crucial factors on the lowest asynchronous frequencies are also addressed and discussed. - Highlights: • Vibration of magnetically affected double-current-carrying nanowires is of interest. • Using Biot–Savart and Lorentz force laws, the applied magnetic forces are evaluated. • The explicit expressions of transverse displacements of nanowires are obtained. • Synchronous and asynchronous modes and their corresponding frequencies are explored. • Roles of crucial factors on free vibrations and dynamic instability are addressed.

  7. Learning in Parallel Universes

    OpenAIRE

    Berthold, Michael R.; Wiswedel, Bernd

    2007-01-01

    This abstract summarizes a brief, preliminary formalization of learning in parallel universes. It also attempts to highlight a few neighboring learning paradigms to illustrate how parallel learning fits into the greater picture.

  8. UNIVERSAL REGULAR AUTONOMOUS ASYNCHRONOUS SYSTEMS: ω-LIMIT SETS, INVARIANCE AND BASINS OF ATTRACTION

    Directory of Open Access Journals (Sweden)

    Serban Vlad

    2011-07-01

    Full Text Available The asynchronous systems are the non-deterministic real timebinarymodels of the asynchronous circuits from electrical engineering.Autonomy means that the circuits and their models have no input.Regularity means analogies with the dynamical systems, thus such systems may be considered to be real time dynamical systems with a’vector field’, Universality refers to the case when the state space of the system is the greatest possible in the sense of theinclusion. The purpose of this paper is that of defining, by analogy with the dynamical systems theory, the omega-limit sets, the invariance and the basins of attraction of the universal regular autonomous asynchronous systems.

  9. Modeling and Analysis of Asynchronous Systems Using SAL and Hybrid SAL

    Science.gov (United States)

    Tiwari, Ashish; Dutertre, Bruno

    2013-01-01

    We present formal models and results of formal analysis of two different asynchronous systems. We first examine a mid-value select module that merges the signals coming from three different sensors that are each asynchronously sampling the same input signal. We then consider the phase locking protocol proposed by Daly, Hopkins, and McKenna. This protocol is designed to keep a set of non-faulty (asynchronous) clocks phase locked even in the presence of Byzantine-faulty clocks on the network. All models and verifications have been developed using the SAL model checking tools and the Hybrid SAL abstractor.

  10. Asynchronous Video Interviewing as a New Technology in Personnel Selection: The Applicant's Point of View.

    Science.gov (United States)

    Brenner, Falko S; Ortner, Tuulia M; Fay, Doris

    2016-01-01

    The present study aimed to integrate findings from technology acceptance research with research on applicant reactions to new technology for the emerging selection procedure of asynchronous video interviewing. One hundred six volunteers experienced asynchronous video interviewing and filled out several questionnaires including one on the applicants' personalities. In line with previous technology acceptance research, the data revealed that perceived usefulness and perceived ease of use predicted attitudes toward asynchronous video interviewing. Furthermore, openness revealed to moderate the relation between perceived usefulness and attitudes toward this particular selection technology. No significant effects emerged for computer self-efficacy, job interview self-efficacy, extraversion, neuroticism, and conscientiousness. Theoretical and practical implications are discussed.

  11. Parallel computing works!

    CERN Document Server

    Fox, Geoffrey C; Messina, Guiseppe C

    2014-01-01

    A clear illustration of how parallel computers can be successfully appliedto large-scale scientific computations. This book demonstrates how avariety of applications in physics, biology, mathematics and other scienceswere implemented on real parallel computers to produce new scientificresults. It investigates issues of fine-grained parallelism relevant forfuture supercomputers with particular emphasis on hypercube architecture. The authors describe how they used an experimental approach to configuredifferent massively parallel machines, design and implement basic systemsoftware, and develop

  12. Parallel processing ITS

    Energy Technology Data Exchange (ETDEWEB)

    Fan, W.C.; Halbleib, J.A. Sr.

    1996-09-01

    This report provides a users` guide for parallel processing ITS on a UNIX workstation network, a shared-memory multiprocessor or a massively-parallel processor. The parallelized version of ITS is based on a master/slave model with message passing. Parallel issues such as random number generation, load balancing, and communication software are briefly discussed. Timing results for example problems are presented for demonstration purposes.

  13. Verbal and Visual Parallelism

    Science.gov (United States)

    Fahnestock, Jeanne

    2003-01-01

    This study investigates the practice of presenting multiple supporting examples in parallel form. The elements of parallelism and its use in argument were first illustrated by Aristotle. Although real texts may depart from the ideal form for presenting multiple examples, rhetorical theory offers a rationale for minimal, parallel presentation. The…

  14. Parallel simulation today

    Science.gov (United States)

    Nicol, David; Fujimoto, Richard

    1992-01-01

    This paper surveys topics that presently define the state of the art in parallel simulation. Included in the tutorial are discussions on new protocols, mathematical performance analysis, time parallelism, hardware support for parallel simulation, load balancing algorithms, and dynamic memory management for optimistic synchronization.

  15. A parallel buffer tree

    DEFF Research Database (Denmark)

    Sitchinava, Nodar; Zeh, Norbert

    2012-01-01

    We present the parallel buffer tree, a parallel external memory (PEM) data structure for batched search problems. This data structure is a non-trivial extension of Arge's sequential buffer tree to a private-cache multiprocessor environment and reduces the number of I/O operations by the number...... of available processor cores compared to its sequential counterpart, thereby taking full advantage of multicore parallelism. The parallel buffer tree is a search tree data structure that supports the batched parallel processing of a sequence of N insertions, deletions, membership queries, and range queries...

  16. Parallel Atomistic Simulations

    Energy Technology Data Exchange (ETDEWEB)

    HEFFELFINGER,GRANT S.

    2000-01-18

    Algorithms developed to enable the use of atomistic molecular simulation methods with parallel computers are reviewed. Methods appropriate for bonded as well as non-bonded (and charged) interactions are included. While strategies for obtaining parallel molecular simulations have been developed for the full variety of atomistic simulation methods, molecular dynamics and Monte Carlo have received the most attention. Three main types of parallel molecular dynamics simulations have been developed, the replicated data decomposition, the spatial decomposition, and the force decomposition. For Monte Carlo simulations, parallel algorithms have been developed which can be divided into two categories, those which require a modified Markov chain and those which do not. Parallel algorithms developed for other simulation methods such as Gibbs ensemble Monte Carlo, grand canonical molecular dynamics, and Monte Carlo methods for protein structure determination are also reviewed and issues such as how to measure parallel efficiency, especially in the case of parallel Monte Carlo algorithms with modified Markov chains are discussed.

  17. Asynchronous Free-Space Optical CDMA Communications System for Last-mile Access Network

    DEFF Research Database (Denmark)

    Jurado-Navas, Antonio; Raddo, Thiago R.; Sanches, Anderson L.

    2016-01-01

    We propose a new hybrid asynchronous OCDMA-FSO communications system for access network solutions. New ABER expressions are derived under gamma-gamma scintillation channels, where all users can surprisingly achieve error-free transmissions when FEC is employed....

  18. Asynchronous abdomino-parasacral resection of a giant pelvic lipoma protruding to the left buttock

    Directory of Open Access Journals (Sweden)

    Masanori Sato

    2014-01-01

    CONCLUSION: The asynchronous abdomino-parasacral approach with several turnings of the patient's body and plastic bag packing of the tumor were advantageous to manage en bloc resection of the giant pelvic lipoma presented in this case study.

  19. Determining sociability, social space, and social presence in (A)synchronous collaborative groups

    NARCIS (Netherlands)

    Kreijns, K.; Kirschner, P.A.; Jochems, W.; Buuren, H. van

    2004-01-01

    The effectiveness of group learning in asynchronous distributed learning groups depends on the social interaction that takes place. This social interaction affects both cognitive and socioemotional processes that take place during learning, group forming, establishment of group structures, and group

  20. Asynchronous Sensor fuSion for Improved Safety of air Traffic (ASSIST) Project

    Data.gov (United States)

    National Aeronautics and Space Administration — SSCI proposes to develop, implement and test a collision detection system for unmanned aerial vehicles (UAV), referred to as the Asynchronous Sensor fuSion for...

  1. Mathematical Description of an Asynchronous Motor with the Indirect Control of the Output Mechanical Variables

    Directory of Open Access Journals (Sweden)

    Glazachev A.V.

    2016-01-01

    Full Text Available The article gives the mathematical description of an asynchronous motor with the indirect control of the output mechanical variables of an asynchronous motor in the electric drive. To determine the electromagnetic torque and angular velocity of the asynchronous motor in the electric drive the mathematical description is used in which the values are determined by the readings of the motor and easily measured values by means of known in practice devices. The proposed in the article the mathematical description for the indirect measuring the electromagnetic torque and angular velocity of the asynchronous motor in the electric drive does not contain the integral components that introduce the great error into the value of the controlled electromagnetic torque and angular velocity.

  2. Commande directe de couple d’un moteur asynchrone à base de techniques intelligentes

    OpenAIRE

    GDAIM, Soufien

    2013-01-01

    Design and Experimental Implementation of DTC of an Induction Machine Based on artificial intelligence Control on FPGA; Implémentation sur FPGA de la Commande directe de couple d’un moteur asynchrone à base de techniques intelligentes

  3. Students experiences with collaborative learning in asynchronous computer-supported collaborative learning environments.

    NARCIS (Netherlands)

    Dewiyanti, Silvia; Brand-Gruwel, Saskia; Jochems, Wim; Broers, Nick

    2008-01-01

    Dewiyanti, S., Brand-Gruwel, S., Jochems, W., & Broers, N. (2007). Students experiences with collaborative learning in asynchronous computer-supported collaborative learning environments. Computers in Human Behavior, 23, 496-514.

  4. Low-power Implementation of an Encryption/Decryption System with Asynchronous Techniques

    Directory of Open Access Journals (Sweden)

    Nikos Sklavos

    2002-01-01

    Full Text Available An asynchronous VLSI implementation of the International Data Encryption Algorithm (IDEA is presented in this paper. In order to evaluate the asynchronous design a synchronous version of the algorithm was also designed. VHDL hardware description language was used in order to describe the algorithm. By using Synopsys commercial available tools the VHDL code was synthesized. After placing and routing both designs were fabricated with 0.6 μm CMOS technology. With a system clock of up to 8 MHz and a power supply of 5 V the two chips were tested and evaluated comparing with the software implementation of the IDEA algorithm. This new approach proves efficiently the lowest power consumption of the asynchronous implementation compared to the existing synchronous. Therefore, the asynchronous chip performs efficiently in Wireless Encryption Protocols and high speed networks.

  5. 106-17 Telemetry Standards. Annex A.4. Asynchronous Recorder Multiplexer Output Re-Constructor (ARMOR)

    Science.gov (United States)

    2017-07-01

    Telemetry Standards, RCC Standard 106-17 Annex A .4, July 2017 ANNEX A .4 Asynchronous Recorder Multiplexer Output Re-Constructor (ARMOR...Acronyms ............................................................................................................................... A .4-iii 1...General ........................................................................................................................ A .4-1 1.1. Setup on Tape

  6. Contradictory indications from terrestrial archives for the asynchronous LGM glaciation in the Central Spanish Pyrenees

    Science.gov (United States)

    Hirsch, Florian; Raab, Thomas

    2014-05-01

    Studies from several Mediterranean sites suggest a nonuniform glaciation during the last glacial cycle. For the Pyrenees an asynchronous maximum ice extent compared to the global last glacial maximum (LGM) is controversially discussed. Our study sites are located in the Central Spanish Pyrenees, namely the Aragon and Gallego Valley. Both valleys are type locations for the Pleistocene glaciations and the early maximum ice extent for the Pyrenees was dated amongst other sites in the Gallego Valley to about 36 ka. Due to the potential time span since the earlier deglaciation compared to LGM sites from Central Europe we used a pedological and sedimentological approach to reconstruct the Late Quaternary landscape development. Our results indicate a considerable reshaping of the LGM landscape prior to the onset of the Holocene. The LGM tills are covered by a deposit with high content of fine sand and coarse silt. On the slopes the clasts in these fine-grained sediments are aligned parallel to the slope direction, whereas in the underlaying tills the clasts are aligned rectangular to the slope direction and therefore representing the direction of the Pleistocene glacier movement. We attribute the alignment of the clasts in the sediment covering the tills to solifluction induced by periglacial conditions. The high contents of coarse silt and fine sand are also characteristic for the eolian component in periglacial slope deposits. OSL datings suggest an age of about 14 ka for these sediments. Soil micromorphology shows that the periglacial deposits were not subject to intensive pedogenic processes prior to the sedimentation but that profiles are strongly affected by lessivation after deposition. Soil erosion is only evident during the Holocene and we associate these phases of soil erosion with the human impact. We found no indications for geomorphologic and pedogenic processes between the reported deposition of the LGM till around 36 ka and the periglacial conditions dated

  7. AP-IO: Asynchronous Pipeline I/O for Hiding Periodic Output Cost in CFD Simulation

    OpenAIRE

    Xiaoguang, Ren; Xinhai, Xu

    2014-01-01

    Computational fluid dynamics (CFD) simulation often needs to periodically output intermediate results to files in the form of snapshots for visualization or restart, which seriously impacts the performance. In this paper, we present asynchronous pipeline I/O (AP-IO) optimization scheme for the periodically snapshot output on the basis of asynchronous I/O and CFD application characteristics. In AP-IO, dedicated background I/O processes or threads are in charge of handling the file write in pip...

  8. Asynchronous presynaptic glutamate release enhances neuronal excitability during the post-spike refractory period.

    Science.gov (United States)

    Iremonger, Karl J; Bains, Jaideep S

    2016-02-15

    Many excitatory synapses in the brain release glutamate with both synchronous and asynchronous components. Immediately following an action potential, neurons display a reduced excitability due to the post-spike afterhyperpolarization (AHP). This gives rise to a relative refractory period. When an action potential is evoked by glutamate synaptic input possessing asynchronous release, the delayed glutamate release events act to depolarize the neuron during the AHP and overcome the relative refractory period. These results demonstrate a new role for asynchronous release in regulating post-spike excitability and the relative refractory period in central neurons. Post-spike afterhyperpolarizations (AHPs) functionally inhibit neuronal excitability for tens to hundreds of milliseconds following each action potential. This imposes a relative refractory period during which synaptic excitation is less effective at evoking spikes. Here we asked whether some synapses have mechanisms in place that allow them to overcome the AHP and drive spiking in target cells during this period of reduced excitability. We examined glutamate synapses onto oxytocin and vasopressin neurons in the paraventricular nucleus of the hypothalamus. These synapses can display pronounced asynchronous glutamate release following a single presynaptic spike, with the time course of release being similar to that of the post-spike AHP. To test whether asynchronous release is more effective at overcoming the relative refractory period, we evoked a single action potential with either a brief synchronous depolarization or an asynchronous potential and then assessed excitability at multiple time points following the spike. Neurons receiving asynchronous depolarizing synaptic inputs had a shorter relative refractory period than those receiving synchronous depolarizations. Our data demonstrate that synapses releasing glutamate in an asynchronous and delayed manner are ideally adapted to counter the AHP. By

  9. Violation of the equivalence principle for stressed bodies in asynchronous relativity

    Energy Technology Data Exchange (ETDEWEB)

    Andrade Martins, R. de (Centro de Logica, Epistemologia e Historia da Ciencia, Campinas (Brazil))

    1983-12-11

    In the recently developed asynchronous formulation of the relativistic theory of extended bodies, the inertial mass of a body does not explicitly depend on its pressure or stress. The detailed analysis of the weight of a box filled with a gas and placed in a weak gravitational field shows that this feature of asynchronous relativity implies a breakdown of the equivalence between inertial and passive gravitational mass for stressed systems.

  10. Comparing face-to-face, synchronous, and asynchronous learning: postgraduate dental resident preferences.

    Science.gov (United States)

    Kunin, Marc; Julliard, Kell N; Rodriguez, Tobias E

    2014-06-01

    The Department of Dental Medicine of Lutheran Medical Center has developed an asynchronous online curriculum consisting of prerecorded PowerPoint presentations with audio explanations. The focus of this study was to evaluate if the new asynchronous format satisfied the educational needs of the residents compared to traditional lecture (face-to-face) and synchronous (distance learning) formats. Lectures were delivered to 219 dental residents employing face-to-face and synchronous formats, as well as the new asynchronous format; 169 (77 percent) participated in the study. Outcomes were assessed with pretests, posttests, and individual lecture surveys. Results found the residents preferred face-to-face and asynchronous formats to the synchronous format in terms of effectiveness and clarity of presentations. This preference was directly related to the residents' perception of how well the technology worked in each format. The residents also rated the quality of student-instructor and student-student interactions in the synchronous and asynchronous formats significantly higher after taking the lecture series than they did before taking it. However, they rated the face-to-face format as significantly more conducive to student-instructor and student-student interaction. While the study found technology had a major impact on the efficacy of this curricular model, the results suggest that the asynchronous format can be an effective way to teach a postgraduate course.

  11. Parallelism in matrix computations

    CERN Document Server

    Gallopoulos, Efstratios; Sameh, Ahmed H

    2016-01-01

    This book is primarily intended as a research monograph that could also be used in graduate courses for the design of parallel algorithms in matrix computations. It assumes general but not extensive knowledge of numerical linear algebra, parallel architectures, and parallel programming paradigms. The book consists of four parts: (I) Basics; (II) Dense and Special Matrix Computations; (III) Sparse Matrix Computations; and (IV) Matrix functions and characteristics. Part I deals with parallel programming paradigms and fundamental kernels, including reordering schemes for sparse matrices. Part II is devoted to dense matrix computations such as parallel algorithms for solving linear systems, linear least squares, the symmetric algebraic eigenvalue problem, and the singular-value decomposition. It also deals with the development of parallel algorithms for special linear systems such as banded ,Vandermonde ,Toeplitz ,and block Toeplitz systems. Part III addresses sparse matrix computations: (a) the development of pa...

  12. Parallel digital forensics infrastructure.

    Energy Technology Data Exchange (ETDEWEB)

    Liebrock, Lorie M. (New Mexico Tech, Socorro, NM); Duggan, David Patrick

    2009-10-01

    This report documents the architecture and implementation of a Parallel Digital Forensics infrastructure. This infrastructure is necessary for supporting the design, implementation, and testing of new classes of parallel digital forensics tools. Digital Forensics has become extremely difficult with data sets of one terabyte and larger. The only way to overcome the processing time of these large sets is to identify and develop new parallel algorithms for performing the analysis. To support algorithm research, a flexible base infrastructure is required. A candidate architecture for this base infrastructure was designed, instantiated, and tested by this project, in collaboration with New Mexico Tech. Previous infrastructures were not designed and built specifically for the development and testing of parallel algorithms. With the size of forensics data sets only expected to increase significantly, this type of infrastructure support is necessary for continued research in parallel digital forensics. This report documents the implementation of the parallel digital forensics (PDF) infrastructure architecture and implementation.

  13. Asynchronous web-based patient-centered home telemedicine system.

    Science.gov (United States)

    Lau, Christopher; Churchill, R Sean; Kim, Janice; Matsen, Frederick A; Kim, Yongmin

    2002-12-01

    A web-based system for asynchronous multimedia messaging between shoulder replacement surgery patients at home and their surgeons was developed and tested. A web browser plug-in simplifies the process of capturing video and transferring it to a web site for novice computer users. The design of the video capture plug-in can be reused to acquire and securely transfer any type of data over the web. For example, readings from home biosensor instruments (e.g., glucometers and spirometers) that can be connected to a personal computer can be transferred to a home telemedicine web site. Both patients and doctors can access this web site to monitor health status longitudinally. Six patients, whose familiarity with computers ranged from no experience to expert users, used the system. All of the subjects were able to use the system to check treatment reminders and to send at least one message with video to their surgeons. The surgeons monitored the system regularly and always responded to messages within 24 h during the six-month trial period.

  14. Asynchronous BCI control using high-frequency SSVEP

    Directory of Open Access Journals (Sweden)

    Laciar Leber Eric

    2011-07-01

    Full Text Available Abstract Background Steady-State Visual Evoked Potential (SSVEP is a visual cortical response evoked by repetitive stimuli with a light source flickering at frequencies above 4 Hz and could be classified into three ranges: low (up to 12 Hz, medium (12-30 and high frequency (> 30 Hz. SSVEP-based Brain-Computer Interfaces (BCI are principally focused on the low and medium range of frequencies whereas there are only a few projects in the high-frequency range. However, they only evaluate the performance of different methods to extract SSVEP. Methods This research proposed a high-frequency SSVEP-based asynchronous BCI in order to control the navigation of a mobile object on the screen through a scenario and to reach its final destination. This could help impaired people to navigate a robotic wheelchair. There were three different scenarios with different difficulty levels (easy, medium and difficult. The signal processing method is based on Fourier transform and three EEG measurement channels. Results The research obtained accuracies ranging in classification from 65% to 100% with Information Transfer Rate varying from 9.4 to 45 bits/min. Conclusions Our proposed method allows all subjects participating in the study to control the mobile object and to reach a final target without prior training.

  15. Microwave Diplexer Purely Based on Direct Synchronous and Asynchronous Coupling

    Directory of Open Access Journals (Sweden)

    A. O. Nwajana

    2016-06-01

    Full Text Available A diplexer realized purely based on direct coupling is presented. No cross-coupling is involved in the design process. The microwave diplexer is achieved by coupling a dual-band bandpass filter onto two individual channel filters. This design eliminates the need for employing external junctions in diplexer design, as opposed to the conventional design approach which requires separate junctions for energy distribution. A 10-pole (10th order diplexer has been successfully designed, simulated, fabricated and measured. The diplexer is composed of 2 poles from the dual-band filter, 4 poles from the Tx bandpass filter, and the remaining 4 poles from the Rx bandpass filter. The design was implemented using synchronously and asynchronously tuned microstrip square open-loop resonators. The simulation and measurement results show that an isolation of 50 dB is achieved between the diplexer Tx and Rx bands. The minimum insertion loss is 2.88 dB for the transmit band, and 2.95 dB for the receive band.

  16. Photonic analog-to-digital converter via asynchronous oversampling

    Science.gov (United States)

    Carver, Spencer; Reeves, Erin; Siahmakoun, Azad; Granieri, Sergio

    2012-06-01

    This paper presents a hybrid opto-electronic asynchronous delta-sigma modulator, implemented in the form of a fiber-optic Analog-to-Digital converter (ADC). This architecture was chosen for its independence of an external clock and ease of demodulation through a single low-pass filter stage. The fiber-optic prototype consists of an input laser (wavelength λ1) which is modulated with an input RF signal, a high-speed comparator circuit working as bi-stable quantizer, and a fiber-optic loop that includes a SOA and a band-pass filter that act as a leaky integrator. The fiber-optic loop acts as a fiber-ring resonator (FRR), and defines the resonance wavelength λ2 of the system. The gain within this loop is modified through cross-gain modulation (XGM) by the input wavelength λ1, and thus achieves the desired modulation effect. The proposed architecture has been constructed and characterized at a sampling rate of 15.4 MS/s processing input analog signals in the range of dc-3 MHz with a signal-to-noise ratio of 36 dB and an effective number of bits of 5.7.

  17. Asynchronous interpretation of manual and automated audiometry: Agreement and reliability.

    Science.gov (United States)

    Brennan-Jones, Christopher G; Eikelboom, Robert H; Bennett, Rebecca J; Tao, Karina Fm; Swanepoel, De Wet

    2018-01-01

    Introduction Remote interpretation of automated audiometry offers the potential to enable asynchronous tele-audiology assessment and diagnosis in areas where synchronous tele-audiometry may not be possible or practical. The aim of this study was to compare remote interpretation of manual and automated audiometry. Methods Five audiologists each interpreted manual and automated audiograms obtained from 42 patients. The main outcome variable was the audiologist's recommendation for patient management (which included treatment recommendations, referral or discharge) between the manual and automated audiometry test. Cohen's Kappa and Krippendorff's Alpha were used to calculate and quantify the intra- and inter-observer agreement, respectively, and McNemar's test was used to assess the audiologist-rated accuracy of audiograms. Audiograms were randomised and audiologists were blinded as to whether they were interpreting a manual or automated audiogram. Results Intra-observer agreement was substantial for management outcomes when comparing interpretations for manual and automated audiograms. Inter-observer agreement was moderate between clinicians for determining management decisions when interpreting both manual and automated audiograms. Audiologists were 2.8 times more likely to question the accuracy of an automated audiogram compared to a manual audiogram. Discussion There is a lack of agreement between audiologists when interpreting audiograms, whether recorded with automated or manual audiometry. The main variability in remote audiogram interpretation is likely to be individual clinician variation, rather than automation.

  18. Commande vectorielle d'un moteur asynchrone sans capteur

    Science.gov (United States)

    Ourth, T.

    1993-06-01

    A field-oriented control strategy for induction machines which does not use mechanical sensors is presented. The rotor flux is observed by a reduced-order Luenberger-type observer based on a model using a stator-fixed reference frame. An estimate of the rotation speed is derived from the flux vector, the measured stator currents and the field orientation angle. Simulations demonstrate that this control strategy performs well even in the presence of parameter variations up to ± 50% (resistances). Ce papier présente la commande par flux orienté d'une machine asynchrone sans capteur de vitesse ou de position. Le flux rotorique est évalué grâce à un observateur d'ordre réduit d'un type voisin de Luenberger travaillant dans un repère fixe statorique. L'estimation de la vitesse est obtenue à partir du module du flux rotorique, des courants statoriques mesurés et de l'angle d'orientation du flux rotorique. Cette étude basée sur des simulations démontre un comportement acceptable de la commande malgré la variation des paramètres comme les résistances de la machine.

  19. Sparse asynchronous cortical generators can produce measurable scalp EEG signals.

    Science.gov (United States)

    von Ellenrieder, Nicolás; Dan, Jonathan; Frauscher, Birgit; Gotman, Jean

    2016-09-01

    We investigate to what degree the synchronous activation of a smooth patch of cortex is necessary for observing EEG scalp activity. We perform extensive simulations to compare the activity generated on the scalp by different models of cortical activation, based on intracranial EEG findings reported in the literature. The spatial activation is modeled as a cortical patch of constant activation or as random sets of small generators (0.1 to 3cm(2) each) concentrated in a cortical region. Temporal activation models for the generation of oscillatory activity are either equal phase or random phase across the cortical patches. The results show that smooth or random spatial activation profiles produce scalp electric potential distributions with the same shape. Also, in the generation of oscillatory activity, multiple cortical generators with random phase produce scalp activity attenuated on average only 2 to 4 times compared to generators with equal phase. Sparse asynchronous cortical generators can produce measurable scalp EEG. This is a possible explanation for seemingly paradoxical observations of simultaneous disorganized intracranial activity and scalp EEG signals. Thus, the standard interpretation of scalp EEG might constitute an oversimplification of the underlying brain activity. Copyright © 2016 Elsevier Inc. All rights reserved.

  20. Obstacle avoidance in social groups: new insights from asynchronous models.

    Science.gov (United States)

    Croft, Simon; Budgey, Richard; Pitchford, Jonathan W; Wood, A Jamie

    2015-05-06

    For moving animals, the successful avoidance of hazardous obstacles is an important capability. Despite this, few models of collective motion have addressed the relationship between behavioural and social features and obstacle avoidance. We develop an asynchronous individual-based model for social movement which allows social structure within groups to be included. We assess the dynamics of group navigation and resulting collision risk in the context of information transfer through the system. In agreement with previous work, we find that group size has a nonlinear effect on collision risk. We implement examples of possible network structures to explore the impact social preferences have on collision risk. We show that any social heterogeneity induces greater obstacle avoidance with further improvements corresponding to groups containing fewer influential individuals. The model provides a platform for both further theoretical investigation and practical application. In particular, we argue that the role of social structures within bird flocks may have an important role to play in assessing the risk of collisions with wind turbines, but that new methods of data analysis are needed to identify these social structures. © 2015 The Author(s) Published by the Royal Society. All rights reserved.

  1. FACT. Normalized and asynchronous mirror alignment for Cherenkov telescopes

    Energy Technology Data Exchange (ETDEWEB)

    Mueller, Sebastian Achim [ETH Zurich (Switzerland); Buss, Jens [TU Dortmund (Germany)

    2016-07-01

    Imaging Atmospheric Cherenkov Telescopes (IACTs) need fast and large imaging optics to map the faint Cherenkov light emitted in cosmic ray air showers onto their image sensors. Segmented reflectors are inexpensive, lightweight and offer good image quality. However, alignment of the mirror facets remains a challenge. A good alignment is crucial in IACT observations to separate gamma rays from hadronic cosmic rays. We present a star tracking alignment method which is not restricted to clear nights. It normalizes the mirror facet reflections to be independent of the reference star or the cloud coverage. It records asynchronously of the telescope drive which makes the method easy to integrate in existing telescopes. It can be combined with remote facet actuation, but it does not need one to work. Furthermore, it can reconstruct all individual mirror facet point spread functions. We present the method and alignment results on the First Geiger-mode Photo Diode Avalanche Cherenkov Telescope (FACT) on the Canary Island of La Palma, Spain.

  2. [System of telesonography with synchronous teleconsultations and asynchronous telediagnoses (Togo)].

    Science.gov (United States)

    Adambounou, K; Farin, F; Boucher, A; Adjenou, K V; Gbeassor, M; N'dakena, K; Vincent, N; Arbeille, P

    2012-01-01

    Ultrasonography is an important nonirradiating diagnostic medical imaging procedure, frequently used, especially in urgent circumstances. This relatively inexpensive noninvasive examination makes it possible to diagnose disorders in various parts of the human body, by examining, for example, the abdomen and pelvis, the cardiovascular system, and the muscles and joints. Ultrasound is also an operator-dependent examination, in that the quality of the result depends on precision in the manipulation of the probe. Unfortunately, many small medical centers and isolated sites do not have an appropriate well-trained sonographer to perform initial evaluations, and an untrained operator cannot capture the appropriate echographic views required for a safe diagnosis of current patients, even with realtime vocal guidance (personal data). The lack of experienced physicians or qualified technicians means that diagnostic ultrasound is not always accessible to patients for rapid examination worldwide, especially in Africa, Amazonia or near the North or South Poles. This situation has led to the development of a new concept of telemedicine: telesonography, with a remote ultrasound diagnosis either in real time (synchronous) or delayed (asynchronous; store-and-forward). These systems of real-time telesonography and data transmission require expensive and complex technology with sophisticated equipment not available in many developing countries. The purpose of this study is to design a low-cost real-time system of telesonography for teleconsultations with experts and a delayed telediagnostic mode between isolated peripheral hospitals and a University Hospital center (UHC). An IP camera and an internet video server were installed in a geographically isolated site equipped with an ultrasound machine and an operator with basic training in its use. Synchronous teleconsultation (second-opinion diagnosis) is possible via internet with a UHC expert. If no ultrasound operator is available at

  3. Performance Studies for Protection Against Asynchronous Dumps in the LHC

    CERN Document Server

    Kramer, T; Bracco, C; Goddard, B; Meddahi, M

    2010-01-01

    The LHC beam dump system has to safely dispose all beams in a wide energy range of 450 GeV to 7 TeV. A 3 ms abort gap in the beam structure for the switch-on of the extraction kicker field ideally allows a loss-free extraction under normal operating conditions. However, a low number of asynchronous beam aborts is to be expected from reliability calculations and from the first year's operational experience with the beam dump kickers. For such cases, MAD-X simulations including all optics and alignment errors have been performed to determine loss patterns around the LHC as a function of the position of the main protection elements in interaction region six. Special attention was paid to the beam load on the tungsten collimators which protect the triplets in the LHC experimental insertions, and the tracking results compared with semi-analytical numerical estimates. The simulations are also compared to the results of beam commissioning of these protection devices.

  4. Tracking Transition: Issues in Asynchronous E-Mail Interviewing

    Directory of Open Access Journals (Sweden)

    Muir Houston

    2008-05-01

    Full Text Available The purpose and focus of this paper is twofold. The first concerns the methodological issues involved with tracking a mobile population, namely students graduating from university; whose patterns of residence may for some time be transitory in nature. The second is to provide some details from a small sample of graduates on the issues raised in the transition from undergraduate study. The paper will tackle the two issues in order. First, an examination of recent methods of qualitative data collection which the development of information technology, in the form of Computer Mediated Communication (CMC, has allowed is undertaken. Second, the results of using one of these techniques (asynchronous e-mail to gather information on the transition from undergraduate study are reported. In addition, advantages and disadvantages that can arise in the use of these new techniques are reported. This paper engages with the overall theme of transition in a number of ways. First, the students are in a process of transition in status; from undergraduate to graduate. Second, in many cases, they may well be in transition in terms of location; from the university location either back home, or away to a new location. Third, they are in transition in terms of activity; either seeking or into employment or engaging in further study at a higher level. Finally, they may be in transition in relation to developing new social networks. URN: urn:nbn:de:0114-fqs0802116

  5. ACK filling void first algorithm and performance for asynchronous OPS

    Science.gov (United States)

    Liu, Huanlin; Shi, Yonghe; Chen, Qianbin; Pan, Yingjun

    2007-11-01

    OPS with feedback shared FDL buffer produce large voids due to FDL buffers only supplying discrete step delay and causing FDL queue virtually occupation. By analyzing the TCP traffic and ACK packets feature, the ACK packet void filling first scheduling is presented to decrease packet loss rate and to reduce the FDL voids. When the FDL buffer void size is fit for the ACK packet, the ACK packet is scheduled to FDL immediately. An ACK and non-ACK packets difference and process flow is designed according the TCP packet frame structure. Compared with the conventional FIFO scheduling and smallest FDL void first scheduling, the algorithm reduces greatly the number of ACK occupying the FDL buffer and eliminates large numbers of ACK's bad influence on efficiency of IP data transmission under different FDL buffer depth and traffic load. The results of simulation show that the proposed scheduling makes use of ACK packets first void filling scheduling mechanism to reduce FDL excess load, increases output utilization and reduce packet loss ratio for asynchronous optical network. This approach is shown to minimize the FDL numbers with the feature of high stabilization and photonic integration and to improve real time TCP traffic performance for Internet network.

  6. Enhancing Critical Thinking in Graduate Nursing Online Asynchronous Discussions.

    Science.gov (United States)

    Novotny, Nancy L; Stapleton, Stephen J; Hardy, Elaine C

    2016-09-01

    Graduate nursing students in online courses often have limited success in developing the critical thinking (CT) skills essential for advanced roles. This study describes the use of complementary strategies in a graduate-level nursing course to enhance CT in online discussions. Using Paul and Elder's framework for understanding the components of CT, the authors designed an asynchronous online course using multiple strategies to promote CT. We used mixed methods to collect descriptive and numerical data and content and repeated measures analyses to identify changes in CT skills and student perceptions across the semester. CT scores increased significantly and aligned with students' perceived improvements in CT. Evidence of CT in online discussions increased significantly across the semester with the use of multiple instructional strategies and substantial student and faculty efforts. The findings are a useful benchmark for future studies comparing combinations of strategies to identify those most effective and least arduous. [J Nurs Educ. 2016;55(9):514-521.]. Copyright 2016, SLACK Incorporated.

  7. Parallel Algorithms and Patterns

    Energy Technology Data Exchange (ETDEWEB)

    Robey, Robert W. [Los Alamos National Lab. (LANL), Los Alamos, NM (United States)

    2016-06-16

    This is a powerpoint presentation on parallel algorithms and patterns. A parallel algorithm is a well-defined, step-by-step computational procedure that emphasizes concurrency to solve a problem. Examples of problems include: Sorting, searching, optimization, matrix operations. A parallel pattern is a computational step in a sequence of independent, potentially concurrent operations that occurs in diverse scenarios with some frequency. Examples are: Reductions, prefix scans, ghost cell updates. We only touch on parallel patterns in this presentation. It really deserves its own detailed discussion which Gabe Rockefeller would like to develop.

  8. Asynchronous vs didactic education: it's too early to throw in the towel on tradition.

    Science.gov (United States)

    Jordan, Jaime; Jalali, Azadeh; Clarke, Samuel; Dyne, Pamela; Spector, Tahlia; Coates, Wendy

    2013-08-08

    Asynchronous, computer based instruction is cost effective, allows self-directed pacing and review, and addresses preferences of millennial learners. Current research suggests there is no significant difference in learning compared to traditional classroom instruction. Data are limited for novice learners in emergency medicine. The objective of this study was to compare asynchronous, computer-based instruction with traditional didactics for senior medical students during a week-long intensive course in acute care. We hypothesized both modalities would be equivalent. This was a prospective observational quasi-experimental study of 4th year medical students who were novice learners with minimal prior exposure to curricular elements. We assessed baseline knowledge with an objective pre-test. The curriculum was delivered in either traditional lecture format (shock, acute abdomen, dyspnea, field trauma) or via asynchronous, computer-based modules (chest pain, EKG interpretation, pain management, trauma). An interactive review covering all topics was followed by a post-test. Knowledge retention was measured after 10 weeks. Pre and post-test items were written by a panel of medical educators and validated with a reference group of learners. Mean scores were analyzed using dependent t-test and attitudes were assessed by a 5-point Likert scale. 44 of 48 students completed the protocol. Students initially acquired more knowledge from didactic education as demonstrated by mean gain scores (didactic: 28.39% ± 18.06; asynchronous 9.93% ± 23.22). Mean difference between didactic and asynchronous = 18.45% with 95% CI [10.40 to 26.50]; p = 0.0001. Retention testing demonstrated similar knowledge attrition: mean gain scores -14.94% (didactic); -17.61% (asynchronous), which was not significantly different: 2.68% ± 20.85, 95% CI [-3.66 to 9.02], p = 0.399. The attitudinal survey revealed that 60.4% of students believed the asynchronous modules were educational and 95

  9. Hybrid Adaptive Ray-Moment Method (HARM2): A highly parallel method for radiation hydrodynamics on adaptive grids

    Science.gov (United States)

    Rosen, A. L.; Krumholz, M. R.; Oishi, J. S.; Lee, A. T.; Klein, R. I.

    2017-02-01

    We present a highly-parallel multi-frequency hybrid radiation hydrodynamics algorithm that combines a spatially-adaptive long characteristics method for the radiation field from point sources with a moment method that handles the diffuse radiation field produced by a volume-filling fluid. Our Hybrid Adaptive Ray-Moment Method (HARM2) operates on patch-based adaptive grids, is compatible with asynchronous time stepping, and works with any moment method. In comparison to previous long characteristics methods, we have greatly improved the parallel performance of the adaptive long-characteristics method by developing a new completely asynchronous and non-blocking communication algorithm. As a result of this improvement, our implementation achieves near-perfect scaling up to O (103) processors on distributed memory machines. We present a series of tests to demonstrate the accuracy and performance of the method.

  10. Efficient Parallel Algorithm for Statistical Ion Track Simulations in Crystalline Materials

    CERN Document Server

    Jeon, Byoungseon

    2008-01-01

    We present an efficient parallel algorithm for statistical Molecular Dynamics simulations of ion tracks in solids. The method is based on the Rare Event Enhanced Domain following Molecular Dynamics (REED-MD) algorithm, which has been successfully applied to studies of, e.g., ion implantation into crystalline semiconductor wafers. We discuss the strategies for parallelizing the method, and we settle on a host-client type polling scheme in which a multiple of asynchronous processors are continuously fed to the host, which, in turn, distributes the resulting feed-back information to the clients. This real-time feed-back consists of, e.g., cumulative damage information or statistics updates necessary for the cloning in the rare event algorithm. We finally demonstrate the algorithm for radiation effects in a nuclear oxide fuel, and we show the balanced parallel approach with high parallel efficiency in multiple processor configurations.

  11. A software architecture for multidisciplinary applications: Integrating task and data parallelism

    Science.gov (United States)

    Chapman, Barbara; Mehrotra, Piyush; Vanrosendale, John; Zima, Hans

    1994-01-01

    Data parallel languages such as Vienna Fortran and HPF can be successfully applied to a wide range of numerical applications. However, many advanced scientific and engineering applications are of a multidisciplinary and heterogeneous nature and thus do not fit well into the data parallel paradigm. In this paper we present new Fortran 90 language extensions to fill this gap. Tasks can be spawned as asynchronous activities in a homogeneous or heterogeneous computing environment; they interact by sharing access to Shared Data Abstractions (SDA's). SDA's are an extension of Fortran 90 modules, representing a pool of common data, together with a set of Methods for controlled access to these data and a mechanism for providing persistent storage. Our language supports the integration of data and task parallelism as well as nested task parallelism and thus can be used to express multidisciplinary applications in a natural and efficient way.

  12. Amplification of asynchronous inhibition-mediated synchronization by feedback in recurrent networks.

    Directory of Open Access Journals (Sweden)

    Sashi Marella

    2010-02-01

    Full Text Available Synchronization of 30-80 Hz oscillatory activity of the principle neurons in the olfactory bulb (mitral cells is believed to be important for odor discrimination. Previous theoretical studies of these fast rhythms in other brain areas have proposed that principle neuron synchrony can be mediated by short-latency, rapidly decaying inhibition. This phasic inhibition provides a narrow time window for the principle neurons to fire, thus promoting synchrony. However, in the olfactory bulb, the inhibitory granule cells produce long lasting, small amplitude, asynchronous and aperiodic inhibitory input and thus the narrow time window that is required to synchronize spiking does not exist. Instead, it has been suggested that correlated output of the granule cells could serve to synchronize uncoupled mitral cells through a mechanism called "stochastic synchronization", wherein the synchronization arises through correlation of inputs to two neural oscillators. Almost all work on synchrony due to correlations presumes that the correlation is imposed and fixed. Building on theory and experiments that we and others have developed, we show that increased synchrony in the mitral cells could produce an increase in granule cell activity for those granule cells that share a synchronous group of mitral cells. Common granule cell input increases the input correlation to the mitral cells and hence their synchrony by providing a positive feedback loop in correlation. Thus we demonstrate the emergence and temporal evolution of input correlation in recurrent networks with feedback. We explore several theoretical models of this idea, ranging from spiking models to an analytically tractable model.

  13. Parallel discrete event simulation

    NARCIS (Netherlands)

    Overeinder, B.J.; Hertzberger, L.O.; Sloot, P.M.A.; Withagen, W.J.

    1991-01-01

    In simulating applications for execution on specific computing systems, the simulation performance figures must be known in a short period of time. One basic approach to the problem of reducing the required simulation time is the exploitation of parallelism. However, in parallelizing the simulation

  14. Patterns For Parallel Programming

    CERN Document Server

    Mattson, Timothy G; Massingill, Berna L

    2005-01-01

    From grids and clusters to next-generation game consoles, parallel computing is going mainstream. Innovations such as Hyper-Threading Technology, HyperTransport Technology, and multicore microprocessors from IBM, Intel, and Sun are accelerating the movement's growth. Only one thing is missing: programmers with the skills to meet the soaring demand for parallel software.

  15. FEATURES OF THREE-DIMENSIONAL SIMULATION OF THE ELECTROMAGNETIC FIELDS OF THE ASYNCHRONOUS MOTORS

    Directory of Open Access Journals (Sweden)

    D. S. Yarymbash

    2016-12-01

    Full Text Available Purpose. Development of new effective approach for the realization of three-dimensional mathematical model of transient electrical and magnetic fields in induction motors, which based on their design features, the nonlinearity of the electrical and magnetic properties of the active and structural materials, which provides adequacy or high simulation accuracy. Research methods. Numerical simulation of the conjugate spatial transient electrical and magnetic fields of the induction motor in the mode of short-circuit, with the help of methods of the theory of electromagnetic fields, finite element, theory of electrical machines and electrical circuits. The obtained results. Theoretical researches and simulation results, which based on numerical realization of the finite element method of three-dimensional mathematical model of the induction motor are obtained. Theoretical researches indicate the features of electrical and magnetic processes of AC power conversion in a short circuit mode. In the area of the coil ends of the low power asynchronous motor it is allocated to 12,5% of the total energy of its magnetic field, which is mainly localized in the active part of the stator, the rotor and the air gap. In the central area of the active part of the induction motor, the length is up to 60% of the total length of the stator and rotor core, the magnetic field has plane-parallel form, but is transformed into zones of coil ends of the stator windings, and near of its core end. The features of the magnetic field and energy distribution, which have a significant effect on the parameters of a short-circuit of small power induction motor and its operating modes are defined. Scientific novelty. The regularities of the distribution of the induction and magnetic field energy in the short-circuit mode and their quantitative relation for active zone and the area of the coil ends of the stator windings of the low-power asynchronous motors are defined. Practical

  16. Parallel computing works

    Energy Technology Data Exchange (ETDEWEB)

    1991-10-23

    An account of the Caltech Concurrent Computation Program (C{sup 3}P), a five year project that focused on answering the question: Can parallel computers be used to do large-scale scientific computations '' As the title indicates, the question is answered in the affirmative, by implementing numerous scientific applications on real parallel computers and doing computations that produced new scientific results. In the process of doing so, C{sup 3}P helped design and build several new computers, designed and implemented basic system software, developed algorithms for frequently used mathematical computations on massively parallel machines, devised performance models and measured the performance of many computers, and created a high performance computing facility based exclusively on parallel computers. While the initial focus of C{sup 3}P was the hypercube architecture developed by C. Seitz, many of the methods developed and lessons learned have been applied successfully on other massively parallel architectures.

  17. Massively parallel mathematical sieves

    Energy Technology Data Exchange (ETDEWEB)

    Montry, G.R.

    1989-01-01

    The Sieve of Eratosthenes is a well-known algorithm for finding all prime numbers in a given subset of integers. A parallel version of the Sieve is described that produces computational speedups over 800 on a hypercube with 1,024 processing elements for problems of fixed size. Computational speedups as high as 980 are achieved when the problem size per processor is fixed. The method of parallelization generalizes to other sieves and will be efficient on any ensemble architecture. We investigate two highly parallel sieves using scattered decomposition and compare their performance on a hypercube multiprocessor. A comparison of different parallelization techniques for the sieve illustrates the trade-offs necessary in the design and implementation of massively parallel algorithms for large ensemble computers.

  18. Commande optimale à flux libre des machines asynchrones

    Science.gov (United States)

    Biedinger, J. M.; Poullain, S.; Yvon, J. P.

    1992-01-01

    The subject of this paper is the optimal control with unconstrained flux of an induction motor being considered as a distributed parameter system described by a nonlinear diffusion equation. This approach allows to describe the electrodynamic state of the motor by taking into account, in a natural way, the influence of saturation and eddy-currents, as well as the nonlinearities due to the variable flux operation. Equations are approximated via a finite element formulation which leads to a finite dimensional dynamical system to which the techniques of optimal control may be applied. The generality of the methodology allows to treat various criteria. The objective aimed in this paper is to force the motor torque to follow a given input, especially under initially demagnetized conditions and with, naturally, constraints on the currents. For this purpose the criterion will be chosen as a norm of the difference between the electromagnetic torque and a given reference torque. Numerical simulations are presented for the case of a squirrel-cage rotor and for a solid iron rotor. Results are compared with those deduced from strategies based on lumped-parameter models. Torque responses obtained with field-oriented control method adapted to the case of flux-variable operation are also presented. Finally a modification of the criterion is proposed for identifying the command which allows to obtain the larger torque during transient states. Dans cet article on traite le problème du contrôle optimal à flux libre d'un moteur asynchrone considéré comme un système à paramètres répartis gouverné par une équation de diffusion non linéaire. Cette approche permet de décrire l'état électrodynamique de la machine en prenant naturellement en compte les effets de la saturation et des courants induits, ainsi que les non-linéarités liées au fonctionnement à flux variable. La formulation éléments finis est utilisée pour traduire le problème continu sous la forme d

  19. iHadoop: Asynchronous Iterations Support for MapReduce

    KAUST Repository

    Elnikety, Eslam

    2011-08-01

    MapReduce is a distributed programming framework designed to ease the development of scalable data-intensive applications for large clusters of commodity machines. Most machine learning and data mining applications involve iterative computations over large datasets, such as the Web hyperlink structures and social network graphs. Yet, the MapReduce model does not efficiently support this important class of applications. The architecture of MapReduce, most critically its dataflow techniques and task scheduling, is completely unaware of the nature of iterative applications; tasks are scheduled according to a policy that optimizes the execution for a single iteration which wastes bandwidth, I/O, and CPU cycles when compared with an optimal execution for a consecutive set of iterations. This work presents iHadoop, a modified MapReduce model, and an associated implementation, optimized for iterative computations. The iHadoop model schedules iterations asynchronously. It connects the output of one iteration to the next, allowing both to process their data concurrently. iHadoop\\'s task scheduler exploits inter- iteration data locality by scheduling tasks that exhibit a producer/consumer relation on the same physical machine allowing a fast local data transfer. For those iterative applications that require satisfying certain criteria before termination, iHadoop runs the check concurrently during the execution of the subsequent iteration to further reduce the application\\'s latency. This thesis also describes our implementation of the iHadoop model, and evaluates its performance against Hadoop, the widely used open source implementation of MapReduce. Experiments using different data analysis applications over real-world and synthetic datasets show that iHadoop performs better than Hadoop for iterative algorithms, reducing execution time of iterative applications by 25% on average. Furthermore, integrating iHadoop with HaLoop, a variant Hadoop implementation that caches

  20. Magnetoencephalography demonstrates multiple asynchronous generators during human sleep spindles.

    Science.gov (United States)

    Dehghani, Nima; Cash, Sydney S; Rossetti, Andrea O; Chen, Chih Chuan; Halgren, Eric

    2010-07-01

    Sleep spindles are approximately 1 s bursts of 10-16 Hz activity that occur during stage 2 sleep. Spindles are highly synchronous across the cortex and thalamus in animals, and across the scalp in humans, implying correspondingly widespread and synchronized cortical generators. However, prior studies have noted occasional dissociations of the magnetoencephalogram (MEG) from the EEG during spindles, although detailed studies of this phenomenon have been lacking. We systematically compared high-density MEG and EEG recordings during naturally occurring spindles in healthy humans. As expected, EEG was highly coherent across the scalp, with consistent topography across spindles. In contrast, the simultaneously recorded MEG was not synchronous, but varied strongly in amplitude and phase across locations and spindles. Overall, average coherence between pairs of EEG sensors was approximately 0.7, whereas MEG coherence was approximately 0.3 during spindles. Whereas 2 principle components explained approximately 50% of EEG spindle variance, >15 were required for MEG. Each PCA component for MEG typically involved several widely distributed locations, which were relatively coherent with each other. These results show that, in contrast to current models based on animal experiments, multiple asynchronous neural generators are active during normal human sleep spindles and are visible to MEG. It is possible that these multiple sources may overlap sufficiently in different EEG sensors to appear synchronous. Alternatively, EEG recordings may reflect diffusely distributed synchronous generators that are less visible to MEG. An intriguing possibility is that MEG preferentially records from the focal core thalamocortical system during spindles, and EEG from the distributed matrix system.

  1. Iterative Schemes for Time Parallelization with Application to Reservoir Simulation

    Energy Technology Data Exchange (ETDEWEB)

    Garrido, I; Fladmark, G E; Espedal, M S; Lee, B

    2005-04-18

    Parallel methods are usually not applied to the time domain because of the inherit sequentialness of time evolution. But for many evolutionary problems, computer simulation can benefit substantially from time parallelization methods. In this paper, they present several such algorithms that actually exploit the sequential nature of time evolution through a predictor-corrector procedure. This sequentialness ensures convergence of a parallel predictor-corrector scheme within a fixed number of iterations. The performance of these novel algorithms, which are derived from the classical alternating Schwarz method, are illustrated through several numerical examples using the reservoir simulator Athena.

  2. Features of the Asynchronous Correlation between the China Coal Price Index and Coal Mining Accidental Deaths.

    Directory of Open Access Journals (Sweden)

    Yuecheng Huang

    Full Text Available The features of the asynchronous correlation between accident indices and the factors that influence accidents can provide an effective reference for warnings of coal mining accidents. However, what are the features of this correlation? To answer this question, data from the China coal price index and the number of deaths from coal mining accidents were selected as the sample data. The fluctuation modes of the asynchronous correlation between the two data sets were defined according to the asynchronous correlation coefficients, symbolization, and sliding windows. We then built several directed and weighted network models, within which the fluctuation modes and the transformations between modes were represented by nodes and edges. Then, the features of the asynchronous correlation between these two variables could be studied from a perspective of network topology. We found that the correlation between the price index and the accidental deaths was asynchronous and fluctuating. Certain aspects, such as the key fluctuation modes, the subgroups characteristics, the transmission medium, the periodicity and transmission path length in the network, were analyzed by using complex network theory, analytical methods and spectral analysis method. These results provide a scientific reference for generating warnings for coal mining accidents based on economic indices.

  3. Asynchronous video streaming vs. synchronous videoconferencing for teaching a pharmacogenetic pharmacotherapy course.

    Science.gov (United States)

    Moridani, Majid

    2007-02-15

    To compare students' performance and course evaluations for a pharmacogenetic pharmacotherapy course taught by synchronous videoconferencing method via the Internet and for the same course taught via asynchronous video streaming via the Internet. In spring 2005, a pharmacogenetic therapy course was taught to 73 students located on Amarillo, Lubbock, and Dallas campuses using synchronous videoconferencing, and in spring 2006, to 78 students located on the same 3 campuses using asynchronous video streaming. A course evaluation was administered to each group at the end of the courses. Students in the asynchronous setting had final course grades of 89% +/- 7% compared to the mean final course grade of 87% +/- 7% in the synchronous group (p = 0.05). Regardless of which technology was used, average course grades did not differ significantly among the 3 campus sites. Significantly more of the students in the asynchronous setting agreed (57%) with the statement that they could read the lecture notes and absorb the content on their own without attending the class than students in the synchronous class (23%; chi-square test; p videos over delivery of content using the synchronous or asynchronous method alone.

  4. Synchronous and asynchronous modes of synaptic transmission utilize different calcium sources.

    Science.gov (United States)

    Wen, Hua; Hubbard, Jeffrey M; Rakela, Benjamin; Linhoff, Michael W; Mandel, Gail; Brehm, Paul

    2013-12-24

    Asynchronous transmission plays a prominent role at certain synapses but lacks the mechanistic insights of its synchronous counterpart. The current view posits that triggering of asynchronous release during repetitive stimulation involves expansion of the same calcium domains underlying synchronous transmission. In this study, live imaging and paired patch clamp recording at the zebrafish neuromuscular synapse reveal contributions by spatially distinct calcium sources. Synchronous release is tied to calcium entry into synaptic boutons via P/Q type calcium channels, whereas asynchronous release is boosted by a propagating intracellular calcium source initiated at off-synaptic locations in the axon and axonal branch points. This secondary calcium source fully accounts for the persistence following termination of the stimulus and sensitivity to slow calcium buffers reported for asynchronous release. The neuromuscular junction and CNS neurons share these features, raising the possibility that secondary calcium sources are common among synapses with prominent asynchronous release. DOI: http://dx.doi.org/10.7554/eLife.01206.001.

  5. DEFINITION OF DYNAMIC INDUCTANCES OF THE ASYNCHRONOUS ENGINE WITH REGARD TO PROCESSES OF SATURATION

    Directory of Open Access Journals (Sweden)

    D. O. Kulagin

    2014-07-01

    Full Text Available Development of mathematical model of asynchronous machines in (d, q coordinate system with taking into account the saturation of magnetic circuits is performed. In the paper, we used the method of dynamic inductances, which is connected with the use of a systematic study of motor properties. An analytical model of asynchronous motor magnetic circuit, which is taken into account action of the tangential and radial dynamic inductances is created. On the basis of this the sensor dynamic inductances of rich machine, which was recorded in (d, q coordinate system of equations of rotor and stator circles of asynchronous motor with the saturation were built. The author suggests to use the method of dynamic inductances at construction of asynchronous engine mathematical model, that allows to take into account the saturation of the main magnetic path for the modes with a wide range of changes in the flow of mutual induction between the stator and the rotor, saturation flow path, the scattering modes that are characterized by large current circuits of the machine, induction, due to processes of saturation, between mutually perpendicular to the contours of the machine, as well as the joint saturation worker thread and threads scattering modes that are characterized by the significant size of the workflow and large values of currents contours of the machine. The mathematical model allows to take into account the change of the magnetic state of asynchronous motor as necessity to build adequate systems of control drives and driving

  6. Neurochemical and neuropharmacological aspects of circadian disruptions: an introduction to asynchronization.

    Science.gov (United States)

    Kohyama, Jun

    2011-06-01

    Circadian disruptions are common in modern society, and there is an urgent need for effective treatment strategies. According to standard diagnostic criteria, most adolescents showing both insomnia and daytime sleepiness are diagnosed as having behavioral-induced sleep efficiency syndrome resulting from insomnia due to inadequate sleep hygiene. However, a simple intervention of adequate sleep hygiene often fails to treat them. As a solution to this clinical problem, the present review first overviews the basic neurochemical and neuropharmachological aspects of sleep and circadian rhythm regulation, then explains several circadian disruptions from similar viewpoints, and finally introduces the clinical notion of asynchronization. Asynchronization is designated to explain the pathophysiology/pathogenesis of exhibition of both insomnia and hypersomnia in adolescents, which comprises disturbances in various aspects of biological rhythms. The major triggers for asynchronization are considered to be a combination of light exposure during the night, which disturbs the biological clock and decreases melatonin secretion, as well as a lack of light exposure in the morning, which prohibits normal synchronization of the biological clock to the 24-hour cycle of the earth and decreases the activity of serotonin. In the chronic phase of asynchronization, involvement of both wake- and sleep-promoting systems is suggested. Both conventional and alternative therapeutic approaches for potential treatment of asynchronization are suggested.

  7. Load frequency control of an asynchronous restructured power ...

    African Journals Online (AJOL)

    user

    Abstract. This paper presents the analysis of load frequency control (LFC) of a two-area restructured power system interconnected via parallel ac/dc transmission links. Simulation results show that the limitations of PI controller can be overcome by including. Fuzzy logic concept and thereby the dynamic performance can be ...

  8. PasMoQAP: A Parallel Asynchronous Memetic Algorithm for solving the Multi-Objective Quadratic Assignment Problem

    OpenAIRE

    Sanhueza, Claudio; Jimenez, Francia; Berretta, Regina; Moscato, Pablo

    2017-01-01

    Multi-Objective Optimization Problems (MOPs) have attracted growing attention during the last decades. Multi-Objective Evolutionary Algorithms (MOEAs) have been extensively used to address MOPs because are able to approximate a set of non-dominated high-quality solutions. The Multi-Objective Quadratic Assignment Problem (mQAP) is a MOP. The mQAP is a generalization of the classical QAP which has been extensively studied, and used in several real-life applications. The mQAP is defined as havin...

  9. Compositional C++: Compositional Parallel Programming

    OpenAIRE

    Chandy, K. Mani; Kesselman, Carl

    1992-01-01

    A compositional parallel program is a program constructed by composing component programs in parallel, where the composed program inherits properties of its components. In this paper, we describe a small extension of C++ called Compositional C++ or CC++ which is an object-oriented notation that supports compositional parallel programming. CC++ integrates different paradigms of parallel programming: data-parallel, task-parallel and object-parallel paradigms; imperative and declarative programm...

  10. Linguistics: evolution and language change.

    Science.gov (United States)

    Bowern, Claire

    2015-01-05

    Linguists have long identified sound changes that occur in parallel. Now novel research shows how Bayesian modeling can capture complex concerted changes, revealing how evolution of sounds proceeds. Copyright © 2015 Elsevier Ltd. All rights reserved.

  11. Badlands: A parallel basin and landscape dynamics model

    Directory of Open Access Journals (Sweden)

    T. Salles

    2016-01-01

    Full Text Available Over more than three decades, a number of numerical landscape evolution models (LEMs have been developed to study the combined effects of climate, sea-level, tectonics and sediments on Earth surface dynamics. Most of them are written in efficient programming languages, but often cannot be used on parallel architectures. Here, I present a LEM which ports a common core of accepted physical principles governing landscape evolution into a distributed memory parallel environment. Badlands (acronym for BAsin anD LANdscape DynamicS is an open-source, flexible, TIN-based landscape evolution model, built to simulate topography development at various space and time scales.

  12. An Asynchronous Time-Division-Multiplexed Network-on-Chip for Real-Time Systems

    DEFF Research Database (Denmark)

    Kasapaki, Evangelia

    Multi-processor architectures using networks-on-chip (NOCs) for communication are becoming the standard approach in the development of embedded systems and general purpose platforms. Typically, multi-processor platforms follow a globally asynchronous locally synchronous (GALS) timing organization...... more flexible timing within its structure, to address signal distribution issues, using a network of synchronous routers. NOCs consist of a switching structure of routers connected by links, with network interfaces (NIs) that connect the processors to the switching structure. Argo uses a novel NI...... design that supports time-predictability, and asynchronous routers that form a time-elastic network. The NI design integrates the DMA functionality and the TDM schedule, and uses dual-ported local memories. The routers combine the router functionality and asynchronous elastic behavior. They also use...

  13. Beyond an Institutionalized Learning Environment: Fostering Interactions and Learning Using Synchronous and Asynchronous Messaging Systems

    Directory of Open Access Journals (Sweden)

    Nikki Philline C. DE LA ROSA

    2004-07-01

    Full Text Available Beyond an Institutionalized Learning Environment: Fostering Interactions and Learning Using Synchronous and Asynchronous Messaging Systems Ma. Luisa D. MARIANO Nikki Philline C. DE LA ROSA University of the Philippines Open University-PHILIPPINE ABSTRACT This paper seeks to examine the use of synchronous and asynchronous messaging systems with distance education students and the implications for student interaction and learning in the institutionalized Integrated Virtual Learning Environment (IVLE of the University of the Philippines Open University (UPOU. It will present, as a case in point, the learning experiences of UPOU students in obtaining tutorial support and using the IVLE and alternative synchronous and asynchronous messaging systems to maximize and facilitate online activities involving the Faculty-in-Charge, Tutor, UPOU support staff and the students.

  14. THE ROLE OF OFFLINE METALANGUAGE TALK IN ASYNCHRONOUS COMPUTER-MEDIATED COMMUNICATION

    Directory of Open Access Journals (Sweden)

    Keiko Kitade

    2008-02-01

    Full Text Available In order to demonstrate how learners utilize the text-based asynchronous attributes of the Bulletin Board System, this study explored Japanese-as-a-second-language learners' metalanguage episodes (Swain & Lapkin, 1995, 1998 in offline verbal peer speech and online asynchronous discussions with their Japanese key pals. The findings suggest the crucial role of offline collaborative dialogue, the interactional modes in which the episodes occur, and the unique discourse structure of metalanguage episodes concerning online and offline interactions. A high score on the posttest also suggests the high retention of linguistic knowledge constructed through offline peer dialogue. In the offline mode, the learners were able to collaboratively construct knowledge with peers in the stipulated time, while simultaneously focusing on task content in the online interaction. The retrospective interviews and questionnaires reveal the factors that could affect the benefits of the asynchronous computer-mediated communication medium for language learning.

  15. GPU-Accelerated Asynchronous Error Correction for Mixed Precision Iterative Refinement

    Energy Technology Data Exchange (ETDEWEB)

    Antz, Hartwig [Karlsruhe Inst. of Technology (KIT) (Germany); Luszczek, Piotr [Univ. of Tennessee, Knoxville, TN (United States); Dongarra, Jack [Univ. of Tennessee, Knoxville, TN (United States); Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Univ. of Manchester (United Kingdom); Heuveline, Vinent [Karlsruhe Inst. of Technology (KIT) (Germany)

    2011-12-14

    In hardware-aware high performance computing, block- asynchronous iteration and mixed precision iterative refinement are two techniques that are applied to leverage the computing power of SIMD accelerators like GPUs. Although they use a very different approach for this purpose, they share the basic idea of compensating the convergence behaviour of an inferior numerical algorithm by a more efficient usage of the provided computing power. In this paper, we want to analyze the potential of combining both techniques. Therefore, we implement a mixed precision iterative refinement algorithm using a block-asynchronous iteration as an error correction solver, and compare its performance with a pure implementation of a block-asynchronous iteration and an iterative refinement method using double precision for the error correction solver. For matrices from theUniversity of FloridaMatrix collection,we report the convergence behaviour and provide the total solver runtime using different GPU architectures.

  16. Synaptotagmin-7 Is an Asynchronous Calcium Sensor for Synaptic Transmission in Neurons Expressing SNAP-23

    DEFF Research Database (Denmark)

    Weber, Jens P; Toft-Bertelsen, Trine L; Mohrmann, Ralf

    2014-01-01

    stimulation, and can even play a dominant role in some synapses. Here, we show that substitution of SNAP-23 for SNAP-25 in mouse autaptic glutamatergic hippocampal neurons results in asynchronous release and a higher frequency of spontaneous release events (mEPSCs). Use of neurons from double-knock-out (SNAP......-25, synaptotagmin-7) mice in combination with viral transduction showed that SNAP-23-driven release is triggered by endogenous synaptotagmin-7. In the absence of synaptotagmin-7 release became even more asynchronous, and the spontaneous release rate increased even more, indicating that synaptotagmin......-7 acts to synchronize release and suppress spontaneous release. However, compared to synaptotagmin-1, synaptotagmin-7 is a both leaky and asynchronous calcium sensor. In the presence of SNAP-25, consequences of the elimination of synaptotagmin-7 were small or absent, indicating that the protein...

  17. Asynchronous Cholinergic Drive Correlates with Excitation-Inhibition Imbalance via a Neuronal Ca2+ Sensor Protein

    Directory of Open Access Journals (Sweden)

    Keming Zhou

    2017-05-01

    Full Text Available Excitation-inhibition imbalance in neural networks is widely linked to neurological and neuropsychiatric disorders. However, how genetic factors alter neuronal activity, leading to excitation-inhibition imbalance, remains unclear. Here, using the C. elegans locomotor circuit, we examine how altering neuronal activity for varying time periods affects synaptic release pattern and animal behavior. We show that while short-duration activation of excitatory cholinergic neurons elicits a reversible enhancement of presynaptic strength, persistent activation results to asynchronous and reduced cholinergic drive, inducing imbalance between endogenous excitation and inhibition. We find that the neuronal calcium sensor protein NCS-2 is required for asynchronous cholinergic release in an activity-dependent manner and dampens excitability of inhibitory neurons non-cell autonomously. The function of NCS-2 requires its Ca2+ binding and membrane association domains. These results reveal a synaptic mechanism implicating asynchronous release in regulation of excitation-inhibition balance.

  18. Dual stator winding variable speed asynchronous generator: magnetic equivalent circuit with saturation, FEM analysis and experiments

    Science.gov (United States)

    Tutelea, L. N.; Muntean, N.; Deaconu, S. I.; Cunţan, C. D.

    2016-02-01

    The authors carried out a theoretical and experimental study of dual stator winding squirrel cage asynchronous generator (DSWA) behaviour in the presence of saturation regime (non-sinusoidal) due to the variable speed operation. The main aims are the determination of the relations of calculating the equivalent parameters of the machine windings, FEM validation of parameters and characteristics with free FEMM 4.2 computing software and the practice experimental tests for verifying them. Issue is limited to three phase range of double stator winding cage-asynchronous generator of small sized powers, the most currently used in the small adjustable speed wind or hydro power plants. The tests were carried out using three-phase asynchronous generator having rated power of 6 [kVA].

  19. Asynchronous control of discrete-time impulsive switched systems with mode-dependent average dwell time.

    Science.gov (United States)

    Wang, Bo; Zhang, Hongbin; Wang, Gang; Dang, Chuangyin; Zhong, Sijun

    2014-03-01

    This paper mainly studies the asynchronous control problem for a class of discrete-time impulsive switched systems, where "asynchronous" means the switching of the controllers has a lag to the switching of system modes. By using multiple Lyapunov functions (MLFs), the much looser asymptotic stability result of closed-loop systems is derived with a mode-dependent average dwell time (MDADT) technique. Based on the stability result obtained, the problem of asynchronous control is solved under a proper switching law. Moreover, the stability and stabilization results are formulated in form of matrix inequalities that are numerically feasible. Finally, an illustrative numerical example is presented to show the effectiveness of the obtained stability results. Copyright © 2013 ISA. Published by Elsevier Ltd. All rights reserved.

  20. Concerted and asynchronous mechanism of ground state proton transfer in alcohol mediated 7-hydroxyquinoline

    Energy Technology Data Exchange (ETDEWEB)

    Kang, Baotao [Department of Chemistry, Sungkyunkwan University, Suwon 440-746 (Korea, Republic of); Jang, Du-Jeon [Department of Chemistry, Seoul National University, Seoul 151-742 (Korea, Republic of); Lee, Jin Yong, E-mail: jinylee@skku.edu [Department of Chemistry, Sungkyunkwan University, Suwon 440-746 (Korea, Republic of)

    2015-07-29

    Highlights: • Reaction rate constants obtained by DFT agree with experimental ones quite well. • Experimental postulate of concerted and asynchronous GSPT was confirmed. • The GSPT reaction can be decomposed into three asynchronous steps. - Abstract: Alcohols mediated 7-hydroxyquinoline (7-HQ) complex has received enormous attractions on the issue of proton transfer reaction in the ground and excited states. In the present paper, concentrating on the ground state proton transfer (GSPT), density functional theory (DFT) calculations were carried out to investigate the intrinsic insight into the reaction mechanism. We found that the GSPT is concerted and asynchronous process and can be accelerated by more acidic alcohol. Such GSPT was initiated by the proton transfer from alcohol to keto group of 7-HQ and finished by the proton transfer from nitrogen to alcohol. Our findings were in agreement with experimental conclusions quite well. Our results would be helpful to understand the proton transfer reaction for 7-HQ and related systems.

  1. Methodological Reflections on the Use of Asynchronous Online Focus Groups in Health Research

    Directory of Open Access Journals (Sweden)

    Sarah Williams PhD

    2012-09-01

    Full Text Available The Internet is increasingly used as a tool in qualitative research. In particular, asynchronous online focus groups are used when factors such as cost, time, or access to participants can make conducting face-to-face research difficult. In this article we consider key methodological issues involved in using asynchronous online focus groups to explore experiences of health and illness. The written nature of Internet communication, the lack of physical presence, and the asynchronous, longitudinal aspects enable participants who might not normally contribute to research studies to reflect on their personal stories before disclosing them to the researcher. Implications for study design, recruitment strategies, and ethics should be considered when deciding whether to use this method.

  2. The design of an asynchronous Tiny RISC TM/TR4101 microprocessor core

    DEFF Research Database (Denmark)

    Christensen, Kåre Tais; Jensen, P.; Korger, P.

    1998-01-01

    This paper presents the design of an asynchronous version of the TR4101 embedded microprocessor core developed by LSI Logic Inc. The asynchronous processor, called ARISC, was designed using the same CAD tools and the same standard cell library that was used to implement the TR4101. The paper...... reports on the design methodology, the architecture, the implementation, and the performance of the ARISC. This includes a comparison with the TR4101, and a detailed breakdown of the power consumption in the ARISC. ARISC is our first attempt at an asynchronous implementation and a number of simplifying...... decisions were made up front. Throughout the entire design we use four-phase handshaking in combination with a normally opaque latch controller. All logic is implemented using static logic standard cells. Despite this the ARISC performs surprisingly well: In 0.35 μm CMOS performance is 74-123 MIPS depending...

  3. Parallel programming with PCN

    Energy Technology Data Exchange (ETDEWEB)

    Foster, I.; Tuecke, S.

    1991-09-01

    PCN is a system for developing and executing parallel programs. It comprises a high-level programming language, a set of tools for developing and debugging programs in this language, and interfaces to Fortran and C that allow the reuse of existing code in multilingual parallel programs. Programs developed using PCN are portable across many different workstations, networks, and parallel computers. This document provides all the information required to develop parallel programs with the PCN programming system. It includes both tutorial and reference material. It also presents the basic concepts that underlie PCN, particularly where these are likely to be unfamiliar to the reader, and provides pointers to other documentation on the PCN language, programming techniques, and tools. PCN is in the public domain. The latest version of both the software and this manual can be obtained by anonymous FTP from Argonne National Laboratory at info.mcs.anl.gov.

  4. Parallel programming with PCN

    Energy Technology Data Exchange (ETDEWEB)

    Foster, I.; Tuecke, S.

    1991-12-01

    PCN is a system for developing and executing parallel programs. It comprises a high-level programming language, tools for developing and debugging programs in this language, and interfaces to Fortran and C that allow the reuse of existing code in multilingual parallel programs. Programs developed using PCN are portable across many different workstations, networks, and parallel computers. This document provides all the information required to develop parallel programs with the PCN programming system. In includes both tutorial and reference material. It also presents the basic concepts that underly PCN, particularly where these are likely to be unfamiliar to the reader, and provides pointers to other documentation on the PCN language, programming techniques, and tools. PCN is in the public domain. The latest version of both the software and this manual can be obtained by anonymous FTP from Argonne National Laboratory in the directory pub/pcn at info.mcs.anl.gov (c.f. Appendix A).

  5. Parallelism viewpoint: An architecture viewpoint to model parallelism behaviour of parallelism-intensive software systems

    OpenAIRE

    Muhammad, Naeem; Boucké, Nelis; Berbers, Yolande

    2010-01-01

    The use of parallelism enhances the performance of a software system. However, its excessive use can degrade the system performance. In this report we propose a parallelism viewpoint to optimize the use of parallelism by eliminating unnecessarily used parallelism in legacy systems. The parallelism viewpoint describes parallelism of the system in order to analyze multiple overheads associated with its threads. We use the proposed viewpoint to find parallelism specific performance overheads of ...

  6. Scalable parallel communications

    Science.gov (United States)

    Maly, K.; Khanna, S.; Overstreet, C. M.; Mukkamala, R.; Zubair, M.; Sekhar, Y. S.; Foudriat, E. C.

    1992-01-01

    Coarse-grain parallelism in networking (that is, the use of multiple protocol processors running replicated software sending over several physical channels) can be used to provide gigabit communications for a single application. Since parallel network performance is highly dependent on real issues such as hardware properties (e.g., memory speeds and cache hit rates), operating system overhead (e.g., interrupt handling), and protocol performance (e.g., effect of timeouts), we have performed detailed simulations studies of both a bus-based multiprocessor workstation node (based on the Sun Galaxy MP multiprocessor) and a distributed-memory parallel computer node (based on the Touchstone DELTA) to evaluate the behavior of coarse-grain parallelism. Our results indicate: (1) coarse-grain parallelism can deliver multiple 100 Mbps with currently available hardware platforms and existing networking protocols (such as Transmission Control Protocol/Internet Protocol (TCP/IP) and parallel Fiber Distributed Data Interface (FDDI) rings); (2) scale-up is near linear in n, the number of protocol processors, and channels (for small n and up to a few hundred Mbps); and (3) since these results are based on existing hardware without specialized devices (except perhaps for some simple modifications of the FDDI boards), this is a low cost solution to providing multiple 100 Mbps on current machines. In addition, from both the performance analysis and the properties of these architectures, we conclude: (1) multiple processors providing identical services and the use of space division multiplexing for the physical channels can provide better reliability than monolithic approaches (it also provides graceful degradation and low-cost load balancing); (2) coarse-grain parallelism supports running several transport protocols in parallel to provide different types of service (for example, one TCP handles small messages for many users, other TCP's running in parallel provide high bandwidth

  7. NEBULAS A High Performance Data-Driven Event-Building Architecture based on an Asynchronous Self-Routing Packet-Switching Network

    CERN Multimedia

    Costa, M; Letheren, M; Djidi, K; Gustafsson, L; Lazraq, T; Minerskjold, M; Tenhunen, H; Manabe, A; Nomachi, M; Watase, Y

    2002-01-01

    RD31 : The project is evaluating a new approach to event building for level-two and level-three processor farms at high rate experiments. It is based on the use of commercial switching fabrics to replace the traditional bus-based architectures used in most previous data acquisition sytems. Switching fabrics permit the construction of parallel, expandable, hardware-driven event builders that can deliver higher aggregate throughput than the bus-based architectures. A standard industrial switching fabric technology is being evaluated. It is based on Asynchronous Transfer Mode (ATM) packet-switching network technology. Commercial, expandable ATM switching fabrics and processor interfaces, now being developed for the future Broadband ISDN infrastructure, could form the basis of an implementation. The goals of the project are to demonstrate the viability of this approach, to evaluate the trade-offs involved in make versus buy options, to study the interfacing of the physics frontend data buffers to such a fabric, a...

  8. CLUVI Parallel Corpus

    OpenAIRE

    Universidade de Vigo. Grupo de investigación TALG

    2012-01-01

    The CLUVI Corpus of the University of Vigo is an open collection of parallel text corpora developed under the direction of Xavier Gómez Guinovart (2003-2012) that covers specific areas of the contemporary Galician language. With 23 million words, the CLUVI Corpus comprises six main parallel corpora belonging to five specialised registers or domains (fiction, computing, popular science, law and administration) and involving five different language combinations (Galician-Spanish bilingual trans...

  9. DPS - Dynamic Parallel Schedules

    OpenAIRE

    IEEE Press; Gerlach, S.; Hersch, R. D.

    2003-01-01

    Dynamic Parallel Schedules (DPS) is a high-level framework for developing parallel applications on distributed memory computers (e.g. clusters of PC). Its model relies on compositional customizable split-compute-merge graphs of operations (directed acyclic flow graphs). The graphs and the mapping of operations to processing nodes are specified dynamically at runtime. DPS applications are pipelined and multithreaded by construction, ensuring a maximal overlap of computations and communications...

  10. Parallel Genetic Algorithm System

    OpenAIRE

    Nagaraju Sangepu; Vikram, K.

    2010-01-01

    Genetic Algorithm (GA) is a popular technique to find the optimum of transformation, because of its simple implementation procedure. In image processing GAs are used as a parameter-search-for procedure, this processing requires very high performance of the computer. Recently, parallel processing used to reduce the time by distributing the appropriate amount of work to each computer in the clustering system. The processing time reduces with the number of dedicated computers. Parallel implement...

  11. Differences in Electronic Exchanges in Synchronous and Asynchronous Computer-Mediated Communication: The Effect of Culture as a Mediating Variable

    Science.gov (United States)

    Angeli, Charoula; Schwartz, Neil H.

    2016-01-01

    Two hundred and eighty undergraduates from universities in two countries were asked to read didactic material, and then think and write about potential solutions to an ill-defined problem. The writing was conducted within a synchronous or asynchronous computer-mediated communication (CMC) environment. Asynchronous CMC took the form of email…

  12. Enhancing Discussions in the Asynchronous Online Classroom: The Lack of Face-to-Face Interaction Does Not Lessen the Lesson

    Science.gov (United States)

    Comer, Debra R.; Lenaghan, Janet A.

    2013-01-01

    This article addresses educators' concerns about using asynchronous online discussions in lieu of face-to-face discussions. Drawing from research on asynchronous online education and Bloom's taxonomy, the authors introduce the system of "original examples" and "value-added comments" that they have developed to promote engaging and meaningful…

  13. Asynchronous and synchronous distance learning in stem education, using the example of the online master program wind energy systems

    Science.gov (United States)

    Gleim, Daniela; Kuhl, Detlef

    2017-07-01

    This paper describes the 100% online teaching concepts of the degree program Online M.Sc. Wind Energy Systems. These are the synchronous teaching concept, the asynchronous learning concept and a combination of synchronous and asynchronous learning concept. The challenges that students and teachers have to face in the implementation of these teaching concepts are described here.

  14. Heating calculation features at self-start of large asynchronous motor

    Science.gov (United States)

    Shevchenko, A. A.; Temlyakova, Z. S.; Grechkin, V. V.; Vilberger, M. E.

    2017-10-01

    The article proposes a method for optimizing the incremental heating calculation in the active volume of a large asynchronous motor for certain kinds of load characteristics. The incremental heating calculation is conditioned by the need to determine the aging level of the insulation and to predict a decrease in the electric machine service life. The method for optimizing the incremental heating calculation of asynchronous motor active volume is based on the automation of calculating the heating when simulating the self-starting process of the motor after eliminating an AC drop.

  15. Numerical modeling of a pulsed asynchronous generator with iron-free cylindrical solid rotor

    Science.gov (United States)

    Guettafi, A.; Delmas, A.; Quichaud, G.

    2001-01-01

    This article presents the numerical simulation with finite element method of the transient regime of an asynchronous generator with iron-free cylindrical solid rotor. During this operation kinetic energy of the rotor is transferred through the ideal rectifier bridge to a load-inductance in order to create a high magnetic field pulse. The interest of this device is the less value of capacitors battery for self-oscillations of the asynchronous generator compared to this one necessary for direct transfer of its energy to the load-inductance.

  16. Finite-time synchronization of uncertain coupled switched neural networks under asynchronous switching.

    Science.gov (United States)

    Wu, Yuanyuan; Cao, Jinde; Li, Qingbo; Alsaedi, Ahmed; Alsaadi, Fuad E

    2017-01-01

    This paper deals with the finite-time synchronization problem for a class of uncertain coupled switched neural networks under asynchronous switching. By constructing appropriate Lyapunov-like functionals and using the average dwell time technique, some sufficient criteria are derived to guarantee the finite-time synchronization of considered uncertain coupled switched neural networks. Meanwhile, the asynchronous switching feedback controller is designed to finite-time synchronize the concerned networks. Finally, two numerical examples are introduced to show the validity of the main results. Copyright © 2016 Elsevier Ltd. All rights reserved.

  17. Asynchronous teaching of psychomotor skills through VR annotations: evaluation in digital rectal examination.

    Science.gov (United States)

    Rissanen, Mikko J; Kume, Naoto; Kuroda, Yoshihiro; Kuroda, Tomohiro; Yoshimura, Koji; Yoshihara, Hiroyuki

    2008-01-01

    Many VR technology based training systems use expert's motion data as the training aid, but would not provide any short-cut to teaching medical skills that do not depend on exact motions. Earlier we presented Annotated Simulation Records (ASRs), which can be used to encapsulate experts' insight on psychomotor skills. Annotations made to behavioural parameters in training simulators enable asynchronous teaching instead of just motion training in a proactive way to the learner. We evaluated ASRs for asynchronous teaching of Digital Rectal Examination (DRE) with 3 urologists and 8 medical students. The ASRs were found more effective than motion-based training with verbal feedback.

  18. State assignment for asynchronous FSMs with the use of the incompatibility and complement graph

    Science.gov (United States)

    Kulisz, Józef

    2016-12-01

    The paper presents an application of a novel concept of graph - the Incompatibility and Complement Graph - to state assignment for asynchronous FSMs. A specific feature of the graph is that it contains two kinds of edges: connecting mutually incompatible nodes, and connecting mutually complementing nodes. The graph can be useful in certain class of optimization problems, in which compatibility of bit patterns both in the true, and in the complemented form has to be analyzed. An example of such a problem is covering analysis in state assignment for asynchronous FSMs. The paper presents a simple example explaining the method. Appropriate algorithms for the graph building and coloring are also presented.

  19. Numerical modeling of a pulsed asynchronous generator with iron-free cylindrical solid rotor

    Energy Technology Data Exchange (ETDEWEB)

    Guettafi, A. [Inst. d' Electrotechnique, Univ. de Batna, Batna (Algeria); Delmas, A.; Quichaud, G. [Lab. de Physique des Gaz et des Plasmas, Univ. Paris Sud, Orsay (France)

    2001-01-01

    This article presents the numerical simulation with finite element method of the transient regime of an asynchronous generator with iron-free cylindrical solid rotor. During this operation kinetic energy of the rotor is transferred through the ideal rectifier bridge to a load-inductance in order to create a high magnetic field pulse. The interest of this device is the less value of capacitors battery for self-oscillations of the asynchronous generator compared to this one necessary for direct transfer of its energy to the load-inductance. (orig.)

  20. Anti-parallel triplexes

    DEFF Research Database (Denmark)

    Kosbar, Tamer R.; Sofan, Mamdouh A.; Waly, Mohamed A.

    2015-01-01

    The phosphoramidites of DNA monomers of 7-(3-aminopropyn-1-yl)-8-aza-7-deazaadenine (Y) and 7-(3-aminopropyn-1-yl)-8-aza-7-deazaadenine LNA (Z) are synthesized, and the thermal stability at pH 7.2 and 8.2 of anti-parallel triplexes modified with these two monomers is determined. When, the anti-parallel...... chain, especially at the end of the TFO strand. On the other hand, the thermal stability of the anti-parallel triplex was dramatically decreased when the TFO strand was modified with the LNA monomer analog Z in the middle of the TFO strand (ΔTm = -9.1 °C). Also the thermal stability decreased...

  1. Massively parallel multicanonical simulations

    Science.gov (United States)

    Gross, Jonathan; Zierenberg, Johannes; Weigel, Martin; Janke, Wolfhard

    2018-03-01

    Generalized-ensemble Monte Carlo simulations such as the multicanonical method and similar techniques are among the most efficient approaches for simulations of systems undergoing discontinuous phase transitions or with rugged free-energy landscapes. As Markov chain methods, they are inherently serial computationally. It was demonstrated recently, however, that a combination of independent simulations that communicate weight updates at variable intervals allows for the efficient utilization of parallel computational resources for multicanonical simulations. Implementing this approach for the many-thread architecture provided by current generations of graphics processing units (GPUs), we show how it can be efficiently employed with of the order of 104 parallel walkers and beyond, thus constituting a versatile tool for Monte Carlo simulations in the era of massively parallel computing. We provide the fully documented source code for the approach applied to the paradigmatic example of the two-dimensional Ising model as starting point and reference for practitioners in the field.

  2. Parallel programming with Python

    CERN Document Server

    Palach, Jan

    2014-01-01

    A fast, easy-to-follow and clear tutorial to help you develop Parallel computing systems using Python. Along with explaining the fundamentals, the book will also introduce you to slightly advanced concepts and will help you in implementing these techniques in the real world. If you are an experienced Python programmer and are willing to utilize the available computing resources by parallelizing applications in a simple way, then this book is for you. You are required to have a basic knowledge of Python development to get the most of this book.

  3. Using Reflective Peer Assessment to Promote Students' Conceptual Understanding through Asynchronous Discussions

    Science.gov (United States)

    Lin, Huann-shyang; Hong, Zuway-R; Wang, Hsin-Hui; Lee, Sung-Tao

    2011-01-01

    This study explores the impact of using assessment items with competing theories to encourage students to practice evaluative reflection and collaborative argumentation in asynchronous discussions. Thirty undergraduate students from various departments worked in small groups and took turns collaboratively discussing the given item's answer,…

  4. Router Designs for an Asynchronous Time-Division-Multiplexed Network-on-Chip

    DEFF Research Database (Denmark)

    Kasapaki, Evangelia; Sparsø, Jens; Sørensen, Rasmus Bo

    2013-01-01

    In this paper we explore the design of an asynchronous router for a time-division-multiplexed (TDM) network-on-chip (NOC) that is being developed for a multi-processor platform for hard real-time systems. TDM inherently requires a common time reference, and existing TDM-based NOC designs are either...

  5. Synthesis and Layout of an Asynchronous Network-on-Chip using Standard EDA Tools

    DEFF Research Database (Denmark)

    Müller, Christoph; Kasapaki, Evangelia; Sørensen, Rasmus Bo

    2014-01-01

    is the key role that clock signals play in specifying time-constraints for the synthesis. In this paper explain how we handled the synthesis and layout of an asynchronous network-on-chip for a multi-core platform. Focus is on the design process while the actual NOC-design and its performance are presented...

  6. Participation in Asynchronous Online Discussion Forums Does Improve Student Learning of Gross Anatomy

    Science.gov (United States)

    Green, Rodney A.; Farchione, Davide; Hughes, Diane L.; Chan, Siew-Pang

    2014-01-01

    Asynchronous online discussion forums are common in blended learning models and are popular with students. A previous report has suggested that participation in these forums may assist student learning in a gross anatomy subject but it was unclear as to whether more academically able students post more often or whether participation led to…

  7. A Study of Asynchronous and Synchronous Discussion on Cognitive Maps in a Distributed Learning Environment.

    Science.gov (United States)

    Bhattacharya, Madhumita

    This paper reports on a comparative study of the use of asynchronous (bulletin board) and synchronous (chat) discussion on three learning units based on the cognitive maps developed by the learners. Cognitive maps have been found to be an effective tool for learners for discussion in a distributed learning environment. Cognitive maps provided…

  8. Effects of Asynchronous Music on Students' Lesson Satisfaction and Motivation at the Situational Level

    Science.gov (United States)

    Digelidis, Nikolaos; Karageorghis, Costas I.; Papapavlou, Anastasia; Papaioannou, Athanasios G.

    2014-01-01

    The aim of this study was to examine the effects of asynchronous (background) music on senior students' motivation and lesson satisfaction at the situational level. A counterbalanced mixed-model design was employed with two factors comprising condition (three levels) and gender (two levels). Two hundred students (82 boys, 118 girls; M [subscript…

  9. Credit Hours with No Set Time: A Study of Credit Policies in Asynchronous Online Education

    Science.gov (United States)

    Prasuhn, Frederick Carl

    2014-01-01

    U.S. public university system policies were examined to learn how credit hours were determined for asynchronous online education. Findings indicated that (a) credit hour meaning and use are not consistent, (b) primary responsibility for credit hour decisions was at the local level, and (c) no policies exist to guide credit hour application for…

  10. Three Interaction Patterns on Asynchronous Online Discussion Behaviours: A Methodological Comparison

    Science.gov (United States)

    Jo, I.; Park, Y.; Lee, H.

    2017-01-01

    An asynchronous online discussion (AOD) is one format of instructional methods that facilitate student-centered learning. In the wealth of AOD research, this study evaluated how students' behavior on AOD influences their academic outcomes. This case study compared the differential analytic methods including web log mining, social network analysis…

  11. Beyond Social Presence: Facelessness and the Ethics of Asynchronous Online Education

    Science.gov (United States)

    Rose, Ellen

    2017-01-01

    In this position paper, I argue that a focus on achieving and increasing social presence in online courses tends to derail a consideration of the ethical implications and dimensions of the essential facelessness of asynchronous education. Drawing upon the work of Emmanuel Levinas and Nel Noddings, who contended that the face is the basis of…

  12. Thematic Analysis of the "Games" Students Play in Asynchronous Learning Environments

    Science.gov (United States)

    MacMillan, Thalia; Forte, Michele; Grant, Cynthia

    2014-01-01

    The dynamics of the student-student relationship within the asynchronous online classroom, as evidenced by conversations in an online discussion board, is a balancing act potentially more complex than those occurring in real-time. In order for learning to truly be considered effective, a collaborative, safe environment needs to exist among…

  13. Factors Related to Cognitive, Emotional, and Behavioral Engagement in the Online Asynchronous Classroom

    Science.gov (United States)

    Pilotti, Maura; Anderson, Stephanie; Hardy, Pamela; Murphy, Pamela; Vincent, Pamela

    2017-01-01

    The purpose of this investigation was to examine the relationships among measures of student engagement, instructor engagement, student performance, and properties of the online classroom. The authors assessed behavioral, cognitive, and emotional engagement of students and instructors in asynchronous discussion forums and collected measures of…

  14. A Coding Scheme to Analyse the Online Asynchronous Discussion Forums of University Students

    Science.gov (United States)

    Biasutti, Michele

    2017-01-01

    The current study describes the development of a content analysis coding scheme to examine transcripts of online asynchronous discussion groups in higher education. The theoretical framework comprises the theories regarding knowledge construction in computer-supported collaborative learning (CSCL) based on a sociocultural perspective. The coding…

  15. Digging beneath the Surface: Analyzing the Complexity of Instructors' Participation in Asynchronous Discussion

    Science.gov (United States)

    Clarke, Lane Whitney; Bartholomew, Audrey

    2014-01-01

    The purpose of this study was to investigate instructor participation in asynchronous discussions through an in-depth content analysis of instructors' postings and comments through the Community of Inquiry (COI) framework (Garrison et. al, 2001). We developed an analytical tool based on this framework in order to better understand what instructors…

  16. Trajectory exploration within asynchronous binary asteroid systems using refined Lagrangian coherent structures

    Science.gov (United States)

    Shang, Haibin; Wu, Xiaoyu; Cui, Pingyuan

    2017-02-01

    Ground observations have found that asynchronous systems constitute most of the population of the near-Earth binary asteroids. This paper concerns the trajectory of a particle in the asynchronous system which is systematically described using periodic ellipsoidal and spherical body models. Due to the non-autonomous characteristics of the asynchronous system, Lagrangian coherent structures (LCS) are employed to identify the various dynamical behaviors. To enhance the accuracy of LCS, a robust LCS finding algorithm is developed incorporating hierarchical grid refinement, one-dimensional search and variational theory verification. In this way, the intricate dynamical transport boundaries are detected efficiently. These boundaries indicate that a total of 15 types of trajectories exist near asynchronous binary asteroids. According to their Kepler energy variations, these trajectories can be grouped into four basic categories, i.e., transitory, escape, impact and flyby trajectories. Furthermore, the influence of the ellipsoid's spin period on the dynamical behavior is discussed in the context of the change of dynamical regions. We found that the transitory and impact motions occur easily in the synchronous-like binary systems, in which the rotation period of the ellipsoid is nearly equal to that of the mutual orbit. Meanwhile, the results confirm a positive correlation between the spinning rate of the ellipsoid and the probability of the escape and flyby trajectories. The LCS also reveal a marked increase in trajectory diversity after a larger initial energy is selected.

  17. Using the Community of Inquiry Model to Investigate Students' Knowledge Construction in Asynchronous Online Discussions

    Science.gov (United States)

    Liu, Chien-Jen; Yang, Shu Ching

    2014-01-01

    This study used the Community of Inquiry (CoI) model proposed by Garrison to investigate students' level of knowledge construction in asynchronous discussions. The participants included 36 senior students (27 males) majoring in information management. The students attended 18 weeks of an online information ethics course. In this study, four types…

  18. Questions as Indicators of Ocean Literacy: Students' Online Asynchronous Discussion with a Marine Scientist

    Science.gov (United States)

    Fauville, Géraldine

    2017-01-01

    In this article, 61 high-school students learned about ocean acidification through a virtual laboratory followed by a virtual lecture and an asynchronous discussion with a marine scientist on an online platform: VoiceThread. This study focuses on the students' development of ocean literacy when prompted to ask questions to the scientist. The…

  19. The Role of Beliefs and Motivation in Asynchronous Online Learning in College-Level Classes

    Science.gov (United States)

    Xie, Kui; Huang, Kun

    2014-01-01

    Epistemic and learning beliefs were found to affect college students' cognitive engagement and study strategies, as well as motivation in classroom settings. However, the relationships between epistemic and learning beliefs, motivation, learning perception, and students' actual learning participation in asynchronous online settings have been…

  20. Collaborative Learning Processes in an Asynchronous Environment: An Analysis through Discourse and Social Networks

    Science.gov (United States)

    Tirado, Ramon; Aguaded, Ignacio; Hernando, Angel

    2011-01-01

    This article analyses an experience in collaborative learning in an asynchronous writing environment through discussion forums on a WebCt platform of the University of Huelva's virtual campus, and was part of an innovative teaching project in 2007-08. The main objectives are to describe the processes of collaborative knowledge construction and the…

  1. Asynchronous Web Discussions in Teacher Training Courses: Promoting Collaborative Learning--Or Not?

    Science.gov (United States)

    Biesenbach-Lucas, Sigrun

    2004-01-01

    Over the past few years, asynchronous web-based technologies have been examined for their usefulness in promoting collaborative learning among university students. Variations in implementation of this technology will determine to what extent students' learning is actually collaborative. This article discusses curricular adaptations made in the…

  2. An Examination of Computer Engineering Students' Perceptions about Asynchronous Discussion Forums

    Science.gov (United States)

    Ozyurt, Ozcan; Ozyurt, Hacer

    2013-01-01

    This study was conducted in order to reveal the usage profiles and perceptions of Asynchronous Discussion Forums (ADFs) of 126 computer engineering students from the Computer Engineering Department in a university in Turkey. By using a mixed methods research design both quantitative and qualitative data were collected and analyzed. Research…

  3. Defining the Symmetry of the Universal Semi-Regular Autonomous Asynchronous Systems

    Directory of Open Access Journals (Sweden)

    Serban E. Vlad

    2012-02-01

    Full Text Available The regular autonomous asynchronous systems are the non-deterministic Boolean dynamical systems and universality means the greatest in the sense of the inclusion. The paper gives four definitions of symmetry of these systems in a slightly more general framework, called semi-regularity, and also many examples.

  4. The Effects of Self-Generated Synchronous and Asynchronous Visual Speech Feedback on Overt Stuttering Frequency

    Science.gov (United States)

    Snyder, Gregory J.; Hough, Monica Strauss; Blanchet, Paul; Ivy, Lennette J.; Waddell, Dwight

    2009-01-01

    Purpose: Relatively recent research documents that visual choral speech, which represents an externally generated form of synchronous visual speech feedback, significantly enhanced fluency in those who stutter. As a consequence, it was hypothesized that self-generated synchronous and asynchronous visual speech feedback would likewise enhance…

  5. An efficient algorithm for computing attractors of synchronous and asynchronous Boolean networks.

    Science.gov (United States)

    Zheng, Desheng; Yang, Guowu; Li, Xiaoyu; Wang, Zhicai; Liu, Feng; He, Lei

    2013-01-01

    Biological networks, such as genetic regulatory networks, often contain positive and negative feedback loops that settle down to dynamically stable patterns. Identifying these patterns, the so-called attractors, can provide important insights for biologists to understand the molecular mechanisms underlying many coordinated cellular processes such as cellular division, differentiation, and homeostasis. Both synchronous and asynchronous Boolean networks have been used to simulate genetic regulatory networks and identify their attractors. The common methods of computing attractors are that start with a randomly selected initial state and finish with exhaustive search of the state space of a network. However, the time complexity of these methods grows exponentially with respect to the number and length of attractors. Here, we build two algorithms to achieve the computation of attractors in synchronous and asynchronous Boolean networks. For the synchronous scenario, combing with iterative methods and reduced order binary decision diagrams (ROBDD), we propose an improved algorithm to compute attractors. For another algorithm, the attractors of synchronous Boolean networks are utilized in asynchronous Boolean translation functions to derive attractors of asynchronous scenario. The proposed algorithms are implemented in a procedure called geneFAtt. Compared to existing tools such as genYsis, geneFAtt is significantly [Formula: see text] faster in computing attractors for empirical experimental systems. The software package is available at https://sites.google.com/site/desheng619/download.

  6. Synchronous and Asynchronous E-Language Learning: A Case Study of Virtual University of Pakistan

    Science.gov (United States)

    Perveen, Ayesha

    2016-01-01

    This case study evaluated the impact of synchronous and asynchronous E-Language Learning activities (ELL-ivities) in an E-Language Learning Environment (ELLE) at Virtual University of Pakistan. The purpose of the study was to assess e-language learning analytics based on the constructivist approach of collaborative construction of knowledge. The…

  7. Pedagogical dimensions of effective online asynchronous teacher communication in higher education

    NARCIS (Netherlands)

    Smits, A.; Voogt, J.; Rutledge, D.; Slykhuis, D.

    2015-01-01

    In this research teacher behaviour in online asynchronous discussions is studied. To this end teachers’ online messages were analyzed and correlated to measures of student satisfaction. Findings show a positive relation between student satisfaction and the presence of content knowledge, multiple

  8. Ecological Affordance and Anxiety in an Oral Asynchronous Computer-Mediated Environment

    Science.gov (United States)

    McNeil, Levi

    2014-01-01

    Previous research suggests that the affordances (van Lier, 2000) of asynchronous computer-mediated communication (ACMC) environments help reduce foreign language anxiety (FLA). However, FLA is rarely the focus of these studies and research has not adequately addressed the relationship between FLA and the affordances that students use. This study…

  9. Flipping the Online Classroom with Web 2.0: The Asynchronous Workshop

    Science.gov (United States)

    Cummings, Lance

    2016-01-01

    This article examines how Web 2.0 technologies can be used to "flip" the online classroom by creating asynchronous workshops in social environments where immediacy and social presence can be maximized. Using experience teaching several communication and writing classes in Google Apps (Google+, Google Hangouts, Google Drive, etc.), I…

  10. Towards behavioral synthesis of asynchronous circuits - an implementation template targeting syntax directed compilation

    DEFF Research Database (Denmark)

    Nielsen, Sune Fallgaard; Sparsø, Jens; Madsen, Jan

    2004-01-01

    domain by introducing a computation model, which resembles the synchronous datapath and control architecture, but which is completely asynchronous. The datapath and control architecture is then expressed in the Balsa-language, and using syntax directed compilation a corresponding handshake circuit...

  11. Comparing Face-To-Face and Asynchronous Online Communication as Mechanisms for Critical Reflective Dialogue

    Science.gov (United States)

    Salter, Susan; Douglas, Tracy; Kember, David

    2017-01-01

    Two mechanisms for engaging in critical reflective dialogue are discussed and compared: face-to-face meetings and asynchronous online discussion. The context is an umbrella action research project, with over 20 participants, which aimed to improve practices in online teaching and contribute to the development of graduate attributes. The article…

  12. Type of Positive Interdependence and Affiliation Motive in an Asynchronous, Collaborative Learning Environment

    Science.gov (United States)

    Brewer, Susan; Klein, James D.

    2006-01-01

    In this study, we investigated the effect of type of positive interdependence (roles, rewards, roles-plus-rewards, or no structure) and affiliation motives (high vs. low) in an asynchronous, collaborative learning environment. College reentry students worked together in small, fully online discussion groups that lasted for seven days. Results…

  13. Characterization and synthesis of a 32-bit asynchronous microprocessor in synchronous reconfigurable devices

    Directory of Open Access Journals (Sweden)

    Adrian Pedroza de la Crúz

    2015-10-01

    Full Text Available This paper presents the design, implementation, and experimental results of 32-bit asynchronous microprocessor developed in a synchronous reconfigurable device (FPGA, taking advantage of a hard macro. It has support for floating point operations, such as addition, subtraction, and multiplication, and is based on the IEEE 754-2008 standard with 32-bit simple precision. This work describes the different blocks of the microprocessors as delay modules, needed to implement a Self-Timed (ST protocol in a synchronous system, and the operational analysis of the asynchronous central unit, according to the developed occupations and speeds. The ST control is based on a micropipeline used as a centralized generator of activation signals that permit the performance of the operations in the microprocessor without the need of a global clock. This work compares the asynchronous microprocessor with a synchronous version. The parameters evaluated are power consumption, area, and speed. Both circuits were designed and implemented in an FPGA Virtex 5. The performance obtained was 4 MIPS for the asynchronous microprocessor against 1.6 MIPS for the synchronous.

  14. MODELING OF ELECTROMECHANICAL TRANSIENTS IN ASYNCHRONOUS MOTORS BASED ON THE USE OF TCHEBYSHEV’S POLYNOMIALS

    Directory of Open Access Journals (Sweden)

    I. V. Tokmakov

    2015-12-01

    Full Text Available The article is dedicated to development of numerical method of electromechanical transient processes calculation in asynchronous motors. Electromechanical transient processes might be quite continuous that causes the calculation time increase and accumulation of errors due to use of modern software solutions. The aim of this work is to design more accelerated method of calculation of electromechanical transient processes in asynchronous motors and to create the convenient and practical model scheme of method. The method is based on approximation of state equations solution with the help of expansion of the solution with orthogonal Chebyshev’s polynomials. The scheme interpretation of this method is presented; it considers the rotor rotation frequency as some current. The given method allows to substitute operations with momentary values of currents by operations with currents images, which are interpreted as constant currents at equivalent circuit. As the result the initial integro-differential equations of state are substituted by the algebraic equations of current images. Also there is method of calculation of production image of the currents which are present at electrical machine. CPU time is decreased more than twice compared to common methods due to calculation of transient process in asynchronous motor according to the given method. Considered method is convenient for calculations of transient processes in complex circuits that include not only asynchronous motors but other electrical machines

  15. An Asynchronous P300 BCI With SSVEP-Based Control State Detection

    DEFF Research Database (Denmark)

    Panicker, Rajesh C.; Puthusserypady, Sadasivan; Sun, Ying

    2011-01-01

    In this paper, an asynchronous brain–computer interface (BCI) system combining the P300 and steady-state visually evoked potentials (SSVEPs) paradigms is proposed. The information transfer is accomplished using P300 event-related potential paradigm and the control state (CS) detection is achieved...

  16. Introducing group-based asynchronous learning to business education : Reflections on effective course design and delivery

    NARCIS (Netherlands)

    Arnold, I.J.M.; Walker, R.

    2004-01-01

    This paper explores the contribution of virtual tools to student learning within full-time management programmes. More specifically, the paper focuses on asynchronous communication tools, considering the scope they offer for group-based collaborative learning outside the classroom. We report on the

  17. Exploring Change in Graduate Students' Perceptions of Web-Based Education throughout an Asynchronous Course

    Science.gov (United States)

    Timotheou, Maria Mama

    2017-01-01

    This paper presents the main findings of a UK study exploring graduate students' perceptions of web-based education, with a specific focus on their change over time, throughout an asynchronous course. Data were collected through online messages and interviews, and analyzed qualitatively, following content and thematic analyses. Participant pre-…

  18. Exploring Singapore Primary School Students' Perceptions of Chinese Asynchronous Online Discussions

    Science.gov (United States)

    Chin, Wong Wan; Sum, Cheung Wing; Foon, Hew Khe

    2008-01-01

    Background: Asynchronous online discussion (AOD) has found widespread use in tertiary education and adult learning environment; however, there has been little research on its use in elementary school, especially in the context of the teaching of the Chinese Language. This study explores the use of AOD in a Chinese Language class in a primary…

  19. The Effect of Instructor Information Provision on Critical Thinking in Students Using Asynchronous Online Discussion

    Science.gov (United States)

    Klisc, Chris; McGill, Tanya; Hobbs, Valerie

    2012-01-01

    The facilitation of critical thinking is one of the most frequently discussed potential benefits of the asynchronous online discussion environment, but many studies have reported that it does not occur to any great extent. This study investigated the effect of information provided to students on the facilitation of their critical thinking outcomes…

  20. ADAPTATION OF PARALLEL VIRTUAL MACHINES MECHANISMS TO PARALLEL SYSTEMS

    Directory of Open Access Journals (Sweden)

    Zafer DEMİR

    2001-02-01

    Full Text Available In this study, at first, Parallel Virtual Machine is reviewed. Since It is based upon parallel processing, it is similar to parallel systems in principle in terms of architecture. Parallel Virtual Machine is neither an operating system nor a programming language. It is a specific software tool that supports heterogeneous parallel systems. However, it takes advantage of the features of both to make users close to parallel systems. Since tasks can be executed in parallel on parallel systems by Parallel Virtual Machine, there is an important similarity between PVM and distributed systems and multiple processors. In this study, the relations in question are examined by making use of Master-Slave programming technique. In conclusion, the PVM is tested with a simple factorial computation on a distributed system to observe its adaptation to parallel architects.

  1. Parallel Robots with Configurable Platforms

    NARCIS (Netherlands)

    Lambert, P.

    2013-01-01

    This thesis explores the fundamentals of a new class of parallel mechanisms called parallel mechanisms with configurable platforms as well as the design and analysis of parallel robots that are based on those mechanisms. Pure parallel robots are formed by two rigid links, the base and the

  2. Asynchronous gaze-independent event-related potential-based brain-computer interface.

    Science.gov (United States)

    Aloise, Fabio; Aricò, Pietro; Schettini, Francesca; Salinari, Serenella; Mattia, Donatella; Cincotti, Febo

    2013-10-01

    In this study a gaze independent event related potential (ERP)-based brain computer interface (BCI) for communication purpose was combined with an asynchronous classifier endowed with dynamical stopping feature. The aim was to evaluate if and how the performance of such asynchronous system could be negatively affected in terms of communication efficiency and robustness to false positives during the intentional no-control state. The proposed system was validated with the participation of 9 healthy subjects. A comparison was performed between asynchronous and synchronous classification technique outputs while users were controlling the same gaze independent BCI interface. The performance of both classification techniques were assessed both off-line and on-line by means of the efficiency metric introduced by Bianchi et al. (2007). This latter metric allows to set a different misclassification cost for wrong classifications and abstentions. Robustness was evaluated as the rate of false positives occurring during voluntary no-control states. The asynchronous classifier did not exhibited significantly higher accuracy or lower error rate with respect to the synchronous classifier (accuracy: 74.66% versus 87.96%, error rate: 7.11% versus 12.04% respectively). However, the on-line and off-line analysis revealed that the communication efficiency was significantly improved (pinterface is a promising solution to be further explored in order to increase the general usability of ERP-based BCI systems designed for severely disabled people with an impairment of the voluntary control of eye movements. In fact, the asynchronous classifier can improve communication efficiency automatically adapting the number of stimulus repetitions to the current user's state and suspending the control if he/she does not intend to select an item. Copyright © 2013 Elsevier B.V. All rights reserved.

  3. A newly proposed disease condition produced by light exposure during night: asynchronization.

    Science.gov (United States)

    Kohyama, Jun

    2009-04-01

    The bedtime of preschoolers/pupils/students in Japan has become progressively later with the result sleep duration has become progressively shorter. With these changes, more than half of the preschoolers/pupils/students in Japan recently have complained of daytime sleepiness, while approximately one quarter of junior and senior high school students in Japan reportedly suffer from insomnia. These preschoolers/pupils/students may be suffering from behaviorally induced insufficient sleep syndrome due to inadequate sleep hygiene. If this diagnosis is correct, they should be free from these complaints after obtaining sufficient sleep by avoiding inadequate sleep hygiene. However, such a therapeutic approach often fails. Although social factors are often involved in these sleep disturbances, a novel clinical notion--asynchronization--can further a deeper understanding of the pathophysiology of these disturbances. The essence of asynchronization is a disturbance in various aspects (e.g., cycle, amplitude, phase and interrelationship) of the biological rhythms that normally exhibit circadian oscillation, presumably involving decreased activity of the serotonergic system. The major trigger of asynchronization is hypothesized to be a combination of light exposure during the night and a lack of light exposure in the morning. In addition to basic principles of morning light and an avoidance of nocturnal light exposure, presumable potential therapeutic approaches for asynchronization involve both conventional ones (light therapy, medications (hypnotics, antidepressants, melatonin, vitamin B12), physical activation, chronotherapy) and alternative ones (kampo, pulse therapy, direct contact, control of the autonomic nervous system, respiration (qigong, tanden breathing), chewing, crawling). A morning-type behavioral preference is described in several of the traditional textbooks for good health. The author recommends a morning-type behavioral lifestyle as a way to reduce

  4. Parallel k-means++

    Energy Technology Data Exchange (ETDEWEB)

    2017-04-04

    A parallelization of the k-means++ seed selection algorithm on three distinct hardware platforms: GPU, multicore CPU, and multithreaded architecture. K-means++ was developed by David Arthur and Sergei Vassilvitskii in 2007 as an extension of the k-means data clustering technique. These algorithms allow people to cluster multidimensional data, by attempting to minimize the mean distance of data points within a cluster. K-means++ improved upon traditional k-means by using a more intelligent approach to selecting the initial seeds for the clustering process. While k-means++ has become a popular alternative to traditional k-means clustering, little work has been done to parallelize this technique. We have developed original C++ code for parallelizing the algorithm on three unique hardware architectures: GPU using NVidia's CUDA/Thrust framework, multicore CPU using OpenMP, and the Cray XMT multithreaded architecture. By parallelizing the process for these platforms, we are able to perform k-means++ clustering much more quickly than it could be done before.

  5. Expressing Parallelism with ROOT

    Energy Technology Data Exchange (ETDEWEB)

    Piparo, D. [CERN; Tejedor, E. [CERN; Guiraud, E. [CERN; Ganis, G. [CERN; Mato, P. [CERN; Moneta, L. [CERN; Valls Pla, X. [CERN; Canal, P. [Fermilab

    2017-11-22

    The need for processing the ever-increasing amount of data generated by the LHC experiments in a more efficient way has motivated ROOT to further develop its support for parallelism. Such support is being tackled both for shared-memory and distributed-memory environments. The incarnations of the aforementioned parallelism are multi-threading, multi-processing and cluster-wide executions. In the area of multi-threading, we discuss the new implicit parallelism and related interfaces, as well as the new building blocks to safely operate with ROOT objects in a multi-threaded environment. Regarding multi-processing, we review the new MultiProc framework, comparing it with similar tools (e.g. multiprocessing module in Python). Finally, as an alternative to PROOF for cluster-wide executions, we introduce the efforts on integrating ROOT with state-of-the-art distributed data processing technologies like Spark, both in terms of programming model and runtime design (with EOS as one of the main components). For all the levels of parallelism, we discuss, based on real-life examples and measurements, how our proposals can increase the productivity of scientists.

  6. Note on parallel universes

    OpenAIRE

    Adams, Niall; Hand, David J.

    2007-01-01

    The parallel universes idea is an attempt to integrate several aspects of learning which share some common aspects. This is an interesting idea: if successful, insights could cross-fertilise, leading to advances in each area. The ‘multi-view’ perspective seems to us to have particular potential.

  7. Parallel hierarchical radiosity rendering

    Energy Technology Data Exchange (ETDEWEB)

    Carter, Michael [Iowa State Univ., Ames, IA (United States)

    1993-07-01

    In this dissertation, the step-by-step development of a scalable parallel hierarchical radiosity renderer is documented. First, a new look is taken at the traditional radiosity equation, and a new form is presented in which the matrix of linear system coefficients is transformed into a symmetric matrix, thereby simplifying the problem and enabling a new solution technique to be applied. Next, the state-of-the-art hierarchical radiosity methods are examined for their suitability to parallel implementation, and scalability. Significant enhancements are also discovered which both improve their theoretical foundations and improve the images they generate. The resultant hierarchical radiosity algorithm is then examined for sources of parallelism, and for an architectural mapping. Several architectural mappings are discussed. A few key algorithmic changes are suggested during the process of making the algorithm parallel. Next, the performance, efficiency, and scalability of the algorithm are analyzed. The dissertation closes with a discussion of several ideas which have the potential to further enhance the hierarchical radiosity method, or provide an entirely new forum for the application of hierarchical methods.

  8. Parallel universes beguile science

    CERN Multimedia

    2007-01-01

    A staple of mind-bending science fiction, the possibility of multiple universes has long intrigued hard-nosed physicists, mathematicians and cosmologists too. We may not be able -- as least not yet -- to prove they exist, many serious scientists say, but there are plenty of reasons to think that parallel dimensions are more than figments of eggheaded imagination.

  9. Parallel Adams methods

    NARCIS (Netherlands)

    P.J. van der Houwen; E. Messina

    1998-01-01

    textabstractIn the literature, various types of parallel methods for integrating nonstiff initial-value problems for first-order ordinary differential equation have been proposed. The greater part of them are based on an implicit multistage method in which the implicit relations are solved by the

  10. Expressing Parallelism with ROOT

    Science.gov (United States)

    Piparo, D.; Tejedor, E.; Guiraud, E.; Ganis, G.; Mato, P.; Moneta, L.; Valls Pla, X.; Canal, P.

    2017-10-01

    The need for processing the ever-increasing amount of data generated by the LHC experiments in a more efficient way has motivated ROOT to further develop its support for parallelism. Such support is being tackled both for shared-memory and distributed-memory environments. The incarnations of the aforementioned parallelism are multi-threading, multi-processing and cluster-wide executions. In the area of multi-threading, we discuss the new implicit parallelism and related interfaces, as well as the new building blocks to safely operate with ROOT objects in a multi-threaded environment. Regarding multi-processing, we review the new MultiProc framework, comparing it with similar tools (e.g. multiprocessing module in Python). Finally, as an alternative to PROOF for cluster-wide executions, we introduce the efforts on integrating ROOT with state-of-the-art distributed data processing technologies like Spark, both in terms of programming model and runtime design (with EOS as one of the main components). For all the levels of parallelism, we discuss, based on real-life examples and measurements, how our proposals can increase the productivity of scientists.

  11. Practical parallel programming

    CERN Document Server

    Bauer, Barr E

    2014-01-01

    This is the book that will teach programmers to write faster, more efficient code for parallel processors. The reader is introduced to a vast array of procedures and paradigms on which actual coding may be based. Examples and real-life simulations using these devices are presented in C and FORTRAN.

  12. Parallel Splash Belief Propagation

    Science.gov (United States)

    2010-08-01

    Service, Directorate for Information Operations and Reports, 1215 Jefferson Davis Highway, Suite 1204, Arlington, VA 22202-4302, and to the Office of...heaps: An alternative to Fibonacci heaps with applications to parallel computation. Communications of the ACM, 31:1343–1354, 1988. G. Elidan, I. Mcgraw

  13. Parallel hierarchical global illumination

    Energy Technology Data Exchange (ETDEWEB)

    Snell, Quinn O. [Iowa State Univ., Ames, IA (United States)

    1997-10-08

    Solving the global illumination problem is equivalent to determining the intensity of every wavelength of light in all directions at every point in a given scene. The complexity of the problem has led researchers to use approximation methods for solving the problem on serial computers. Rather than using an approximation method, such as backward ray tracing or radiosity, the authors have chosen to solve the Rendering Equation by direct simulation of light transport from the light sources. This paper presents an algorithm that solves the Rendering Equation to any desired accuracy, and can be run in parallel on distributed memory or shared memory computer systems with excellent scaling properties. It appears superior in both speed and physical correctness to recent published methods involving bidirectional ray tracing or hybrid treatments of diffuse and specular surfaces. Like progressive radiosity methods, it dynamically refines the geometry decomposition where required, but does so without the excessive storage requirements for ray histories. The algorithm, called Photon, produces a scene which converges to the global illumination solution. This amounts to a huge task for a 1997-vintage serial computer, but using the power of a parallel supercomputer significantly reduces the time required to generate a solution. Currently, Photon can be run on most parallel environments from a shared memory multiprocessor to a parallel supercomputer, as well as on clusters of heterogeneous workstations.

  14. Parallel programming with PCN

    Energy Technology Data Exchange (ETDEWEB)

    Foster, I.; Tuecke, S.

    1993-01-01

    PCN is a system for developing and executing parallel programs. It comprises a high-level programming language, tools for developing and debugging programs in this language, and interfaces to Fortran and Cthat allow the reuse of existing code in multilingual parallel programs. Programs developed using PCN are portable across many different workstations, networks, and parallel computers. This document provides all the information required to develop parallel programs with the PCN programming system. It includes both tutorial and reference material. It also presents the basic concepts that underlie PCN, particularly where these are likely to be unfamiliar to the reader, and provides pointers to other documentation on the PCN language, programming techniques, and tools. PCN is in the public domain. The latest version of both the software and this manual can be obtained by anonymous ftp from Argonne National Laboratory in the directory pub/pcn at info.mcs. ani.gov (cf. Appendix A). This version of this document describes PCN version 2.0, a major revision of the PCN programming system. It supersedes earlier versions of this report.

  15. Parallel computers and parallel algorithms for CFD: An introduction

    Science.gov (United States)

    Roose, Dirk; Vandriessche, Rafael

    1995-10-01

    This text presents a tutorial on those aspects of parallel computing that are important for the development of efficient parallel algorithms and software for computational fluid dynamics. We first review the main architectural features of parallel computers and we briefly describe some parallel systems on the market today. We introduce some important concepts concerning the development and the performance evaluation of parallel algorithms. We discuss how work load imbalance and communication costs on distributed memory parallel computers can be minimized. We present performance results for some CFD test cases. We focus on applications using structured and block structured grids, but the concepts and techniques are also valid for unstructured grids.

  16. Melting and dehydration within mantle plumes and the formation of sub-parallel volcanic trends at intra-plate hotspots: Analysis of physical properties on spatial and temporal evolution of viscous plug formation

    Science.gov (United States)

    Kundargi, R.; Hall, P. S.

    2012-12-01

    Recent volcanism associated with the Hawaiian hotspot has long been recognized as occurring along two physically distinct, sub-parallel volcanic chains, known as the Loa and Kea trends [e.g., Jackson, 1972]. Recently, several additional intra-plate hotspots, including Samoa [Workman et al., 2004], Marquesas [Chauvel et al., 2009; Huang et al., 2011], and Societies [Payne et al., in press], have been shown to exhibit dual-chain volcanism similar to that at Hawaii. Despite the prevalence of this pattern of volcanism at hotspots, its cause is not well understood. Previous explanations for the presence of dual-chain volcanism at Hawaii focused on magma migration to explain the spatial distribution of volcanism. In particular, Hieronymus and Bercovici [1999] developed a model in which lithospheric flexure induced by loading from the growth of volcanic edifices alters magma migration pathways through the lithosphere over time. In this model, a perturbation to the magma supply, such as might be expected as the result of a change in plate motion, can result in the surface expression of magmatism being focused into two sub-parallel chains. Here, we investigate an alternative hypothesis for the formation of dual-chain volcanism, in which melting and dehydration of upwelling peridotite within a plume conduit leads to the creation of a plug of viscous, buoyant residuum that inhibits upward flow at the center of the plume conduit near the base of the lithosphere. This suppresses the rate of melt generation above the center of the conduit and results in a bifurcated distribution of melt production. We report on a series of 3-D numerical experiments in which mantle upwelling within a plume conduit impinges on the base of an overriding oceanic plate far from any plate boundaries. The experiments were conducted using CitcomCU. Melting and dehydration were modeled using a Lagrangian particle method, and a diffusion creep rheology that explicitly includes the effects of water on

  17. PARALLEL MOVING MECHANICAL SYSTEMS

    Directory of Open Access Journals (Sweden)

    Florian Ion Tiberius Petrescu

    2014-09-01

    Full Text Available Normal 0 false false false EN-US X-NONE X-NONE MicrosoftInternetExplorer4 Moving mechanical systems parallel structures are solid, fast, and accurate. Between parallel systems it is to be noticed Stewart platforms, as the oldest systems, fast, solid and precise. The work outlines a few main elements of Stewart platforms. Begin with the geometry platform, kinematic elements of it, and presented then and a few items of dynamics. Dynamic primary element on it means the determination mechanism kinetic energy of the entire Stewart platforms. It is then in a record tail cinematic mobile by a method dot matrix of rotation. If a structural mottoelement consists of two moving elements which translates relative, drive train and especially dynamic it is more convenient to represent the mottoelement as a single moving components. We have thus seven moving parts (the six motoelements or feet to which is added mobile platform 7 and one fixed.

  18. Parallel grid population

    Science.gov (United States)

    Wald, Ingo; Ize, Santiago

    2015-07-28

    Parallel population of a grid with a plurality of objects using a plurality of processors. One example embodiment is a method for parallel population of a grid with a plurality of objects using a plurality of processors. The method includes a first act of dividing a grid into n distinct grid portions, where n is the number of processors available for populating the grid. The method also includes acts of dividing a plurality of objects into n distinct sets of objects, assigning a distinct set of objects to each processor such that each processor determines by which distinct grid portion(s) each object in its distinct set of objects is at least partially bounded, and assigning a distinct grid portion to each processor such that each processor populates its distinct grid portion with any objects that were previously determined to be at least partially bounded by its distinct grid portion.

  19. Seeing in parallel

    Energy Technology Data Exchange (ETDEWEB)

    Little, J.J.; Poggio, T.; Gamble, E.B. Jr.

    1988-01-01

    Computer algorithms have been developed for early vision processes that give separate cues to the distance from the viewer of three-dimensional surfaces, their shape, and their material properties. The MIT Vision Machine is a computer system that integrates several early vision modules to achieve high-performance recognition and navigation in unstructured environments. It is also an experimental environment for theoretical progress in early vision algorithms, their parallel implementation, and their integration. The Vision Machine consists of a movable, two-camera Eye-Head input device and an 8K Connection Machine. The authors have developed and implemented several parallel early vision algorithms that compute edge detection, stereopsis, motion, texture, and surface color in close to real time. The integration stage, based on coupled Markov random field models, leads to a cartoon-like map of the discontinuities in the scene, with partial labeling of the brightness edges in terms of their physical origin.

  20. Homology, convergence and parallelism.

    Science.gov (United States)

    Ghiselin, Michael T

    2016-01-05

    Homology is a relation of correspondence between parts of parts of larger wholes. It is used when tracking objects of interest through space and time and in the context of explanatory historical narratives. Homologues can be traced through a genealogical nexus back to a common ancestral precursor. Homology being a transitive relation, homologues remain homologous however much they may come to differ. Analogy is a relationship of correspondence between parts of members of classes having no relationship of common ancestry. Although homology is often treated as an alternative to convergence, the latter is not a kind of correspondence: rather, it is one of a class of processes that also includes divergence and parallelism. These often give rise to misleading appearances (homoplasies). Parallelism can be particularly hard to detect, especially when not accompanied by divergences in some parts of the body. © 2015 The Author(s).

  1. Parallel Anisotropic Tetrahedral Adaptation

    Science.gov (United States)

    Park, Michael A.; Darmofal, David L.

    2008-01-01

    An adaptive method that robustly produces high aspect ratio tetrahedra to a general 3D metric specification without introducing hybrid semi-structured regions is presented. The elemental operators and higher-level logic is described with their respective domain-decomposed parallelizations. An anisotropic tetrahedral grid adaptation scheme is demonstrated for 1000-1 stretching for a simple cube geometry. This form of adaptation is applicable to more complex domain boundaries via a cut-cell approach as demonstrated by a parallel 3D supersonic simulation of a complex fighter aircraft. To avoid the assumptions and approximations required to form a metric to specify adaptation, an approach is introduced that directly evaluates interpolation error. The grid is adapted to reduce and equidistribute this interpolation error calculation without the use of an intervening anisotropic metric. Direct interpolation error adaptation is illustrated for 1D and 3D domains.

  2. Xyce parallel electronic simulator.

    Energy Technology Data Exchange (ETDEWEB)

    Keiter, Eric R; Mei, Ting; Russo, Thomas V.; Rankin, Eric Lamont; Schiek, Richard Louis; Thornquist, Heidi K.; Fixel, Deborah A.; Coffey, Todd S; Pawlowski, Roger P; Santarelli, Keith R.

    2010-05-01

    This document is a reference guide to the Xyce Parallel Electronic Simulator, and is a companion document to the Xyce Users Guide. The focus of this document is (to the extent possible) exhaustively list device parameters, solver options, parser options, and other usage details of Xyce. This document is not intended to be a tutorial. Users who are new to circuit simulation are better served by the Xyce Users Guide.

  3. Stability of parallel flows

    CERN Document Server

    Betchov, R

    2012-01-01

    Stability of Parallel Flows provides information pertinent to hydrodynamical stability. This book explores the stability problems that occur in various fields, including electronics, mechanics, oceanography, administration, economics, as well as naval and aeronautical engineering. Organized into two parts encompassing 10 chapters, this book starts with an overview of the general equations of a two-dimensional incompressible flow. This text then explores the stability of a laminar boundary layer and presents the equation of the inviscid approximation. Other chapters present the general equation

  4. Algorithmically specialized parallel computers

    CERN Document Server

    Snyder, Lawrence; Gannon, Dennis B

    1985-01-01

    Algorithmically Specialized Parallel Computers focuses on the concept and characteristics of an algorithmically specialized computer.This book discusses the algorithmically specialized computers, algorithmic specialization using VLSI, and innovative architectures. The architectures and algorithms for digital signal, speech, and image processing and specialized architectures for numerical computations are also elaborated. Other topics include the model for analyzing generalized inter-processor, pipelined architecture for search tree maintenance, and specialized computer organization for raster

  5. Predictability and Parallelism of Multitrait Adaptation.

    Science.gov (United States)

    Langerhans, Randall Brian

    2017-12-21

    Environments shape the traits of organisms. Environmental variation may rarely alter selection on only a few traits, but instead precipitate wholesale changes of the multidimensional selective regime-many traits might experience divergent selection across divergent environments. Such changes in selection can elicit multifarious evolution. How predictable (from theory) and how parallel (consistent occurrences) is multitrait divergence across replicated environments? Here, I address this question using the post-Pleistocene radiation of Bahamas mosquitofish (Gambusia hubbsi) inhabiting blue holes on Andros Island. These fish independently colonized numerous blue holes, some that harbor a major fish predator (bigmouth sleeper, Gobiomorus dormitor) and some that lack any major predators. I used 5 approaches to quantitatively explore the predictability and parallelism of multitrait divergence between predation regimes in Bahamas mosquitofish. Synthesizing data for 90 traits from 13 different types of character suites (e.g., body morphology, life history, genital morphology, coloration, mating preference, habitat use), I found widespread evidence for strong, predictable, and parallel divergence between predation regimes. Yet despite the great majority of traits showing predictable trajectories of change, and the majority of traits showing significant parallelism and strong magnitudes of predictable divergence, I uncovered that over half of the overall phenotypic variation among populations was not driven by variation in predation regime. Results suggest that focusing on few traits, or focusing on parallel aspects of divergence, can provide a misleading picture of adaptation, and nonparallel divergence appears widespread and warrants greater attention. Taking a multitrait perspective, and quantifying predictability and parallelism, can yield important insights. © The American Genetic Association 2017. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  6. Tiling and Asynchronous Communication Optimizations for Stencil Computations

    KAUST Repository

    Malas, Tareq

    2015-12-07

    The importance of stencil-based algorithms in computational science has focused attention on optimized parallel implementations for multilevel cache-based processors. Temporal blocking schemes leverage the large bandwidth and low latency of caches to accelerate stencil updates and approach theoretical peak performance. A key ingredient is the reduction of data traffic across slow data paths, especially the main memory interface. Most of the established work concentrates on updating separate cache blocks per thread, which works on all types of shared memory systems, regardless of whether there is a shared cache among the cores. This approach is memory-bandwidth limited in several situations, where the cache space for each thread can be too small to provide sufficient in-cache data reuse. We introduce a generalized multi-dimensional intra-tile parallelization scheme for shared-cache multicore processors that results in a significant reduction of cache size requirements and shows a large saving in memory bandwidth usage compared to existing approaches. It also provides data access patterns that allow efficient hardware prefetching. Our parameterized thread groups concept provides a controllable trade-off between concurrency and memory usage, shifting the pressure between the memory interface and the Central Processing Unit (CPU).We also introduce efficient diamond tiling structure for both shared memory cache blocking and distributed memory relaxed-synchronization communication, demonstrated using one-dimensional domain decomposition. We describe the approach and our open-source testbed implementation details (called Girih), present performance results on contemporary Intel processors, and apply advanced performance modeling techniques to reconcile the observed performance with hardware capabilities. Furthermore, we conduct a comparison with the state-of-the-art stencil frameworks PLUTO and Pochoir in shared memory, using corner-case stencil operators. We study the

  7. A Parallel Strategy for Convolutional Neural Network Based on Heterogeneous Cluster for Mobile Information System

    Directory of Open Access Journals (Sweden)

    Jilin Zhang

    2017-01-01

    Full Text Available With the development of the mobile systems, we gain a lot of benefits and convenience by leveraging mobile devices; at the same time, the information gathered by smartphones, such as location and environment, is also valuable for business to provide more intelligent services for customers. More and more machine learning methods have been used in the field of mobile information systems to study user behavior and classify usage patterns, especially convolutional neural network. With the increasing of model training parameters and data scale, the traditional single machine training method cannot meet the requirements of time complexity in practical application scenarios. The current training framework often uses simple data parallel or model parallel method to speed up the training process, which is why heterogeneous computing resources have not been fully utilized. To solve these problems, our paper proposes a delay synchronization convolutional neural network parallel strategy, which leverages the heterogeneous system. The strategy is based on both synchronous parallel and asynchronous parallel approaches; the model training process can reduce the dependence on the heterogeneous architecture in the premise of ensuring the model convergence, so the convolution neural network framework is more adaptive to different heterogeneous system environments. The experimental results show that the proposed delay synchronization strategy can achieve at least three times the speedup compared to the traditional data parallelism.

  8. Special purpose parallel computer architecture for real-time control and simulation in robotic applications

    Science.gov (United States)

    Fijany, Amir (Inventor); Bejczy, Antal K. (Inventor)

    1993-01-01

    This is a real-time robotic controller and simulator which is a MIMD-SIMD parallel architecture for interfacing with an external host computer and providing a high degree of parallelism in computations for robotic control and simulation. It includes a host processor for receiving instructions from the external host computer and for transmitting answers to the external host computer. There are a plurality of SIMD microprocessors, each SIMD processor being a SIMD parallel processor capable of exploiting fine grain parallelism and further being able to operate asynchronously to form a MIMD architecture. Each SIMD processor comprises a SIMD architecture capable of performing two matrix-vector operations in parallel while fully exploiting parallelism in each operation. There is a system bus connecting the host processor to the plurality of SIMD microprocessors and a common clock providing a continuous sequence of clock pulses. There is also a ring structure interconnecting the plurality of SIMD microprocessors and connected to the clock for providing the clock pulses to the SIMD microprocessors and for providing a path for the flow of data and instructions between the SIMD microprocessors. The host processor includes logic for controlling the RRCS by interpreting instructions sent by the external host computer, decomposing the instructions into a series of computations to be performed by the SIMD microprocessors, using the system bus to distribute associated data among the SIMD microprocessors, and initiating activity of the SIMD microprocessors to perform the computations on the data by procedure call.

  9. The Interplay of Content and Community in Synchronous and Asynchronous Communication: Virtual Communication in a Graduate Seminar

    Directory of Open Access Journals (Sweden)

    Richard A. Schwier

    2002-06-01

    Full Text Available A group of graduate students and an instructor at the University of Saskatchewan experimented with the use of synchronous communication (chat and asynchronous communication (bulletin board in a theory course in Educational Communications and Technology for an eight-month period. Synchronous communication contributed dramatically to the continuity and convenience of the class, and promoted a strong sense of community. At the same time, it was viewed as less effective than asynchronous communication for dealing with content and issues deeply, and it introduced a number of pedagogical and intellectual limitations. We concluded that synchronous and asynchronous strategies were suitable for different types of learning, and what we experienced was a balancing act between content and community in our group. A combination of synchronous and asynchronous experiences seems to be necessary to promote the kind of engagement and depth required in a graduate seminar.

  10. SEU/SEL Resistant Ultra-Low Power Asynchronous Processor Design for Low-Temperature Applications Project

    Data.gov (United States)

    National Aeronautics and Space Administration — This Phase I SBIR proposal seeks funding to develop a radiation-hardened circuit architecture to achieve SEU and SEL immunity by using delay-insensitive asynchronous...

  11. Synchronization, retiming and OTDM of an asynchronous 10 Gigabit Ethernet NRZ packet using a time lens for Terabit Ethernet

    DEFF Research Database (Denmark)

    Hu, Hao; Laguardia Areal, Janaina; Mulvad, Hans Christian Hansen

    2011-01-01

    An asynchronous 10G Ethernet packet is synchronized and retimed to a master clock using a time lens. The NRZ packet is converted into an RZ packet and multiplexed with a serial 1.28 Tb/s signal.......An asynchronous 10G Ethernet packet is synchronized and retimed to a master clock using a time lens. The NRZ packet is converted into an RZ packet and multiplexed with a serial 1.28 Tb/s signal....

  12. Internal Structure of Virtual Communications in Communities of Inquiry in Higher Education: Phases, Evolution and Participants' Satisfaction

    Science.gov (United States)

    Gutierrez-Santiuste, Elba; Gallego-Arrufat, Maria-Jesus

    2015-01-01

    This study investigates the phases of development of synchronous and asynchronous virtual communication produced in a community of inquiry (CoI) by analyzing the internal structure of each intervention in the forum and each chat session to determine the evolution of their social, cognitive and teaching character. It also analyzes the participating…

  13. Realistic modelling of the effects of asynchronous motion at the base of bridge piers

    CERN Document Server

    Romanelli, F; Vaccari, F

    2002-01-01

    Frequently long-span bridges provide deep valley crossings, which require special consideration due to the possibility of local amplification of the ground motion as a consequence of topographical irregularities and local soil conditions. This does in fact cause locally enhanced seismic input with the possibility for the bridge piers to respond asynchronously. This introduces special design requirements so that possible out-of-phase ground displacements and the associated large relative displacements of adjacent piers can be accommodated without excessive damage. Assessment of the local variability of the ground motion due to local lateral heterogeneities and to attenuation properties is thus crucial toward the realistic definition of the asynchronous motion at the base of the bridge piers. We illustrate the work done in the framework of a large international cooperation to assess the importance of non-synchronous seismic excitation of long structures. To accomplish this task we compute complete synthetic acc...

  14. Bayesian operational modal analysis with asynchronous data, part I: Most probable value

    Science.gov (United States)

    Zhu, Yi-Chen; Au, Siu-Kui

    2018-01-01

    In vibration tests, multiple sensors are used to obtain detailed mode shape information about the tested structure. Time synchronisation among data channels is required in conventional modal identification approaches. Modal identification can be more flexibly conducted if this is not required. Motivated by the potential gain in feasibility and economy, this work proposes a Bayesian frequency domain method for modal identification using asynchronous 'output-only' ambient data, i.e. 'operational modal analysis'. It provides a rigorous means for identifying the global mode shape taking into account the quality of the measured data and their asynchronous nature. This paper (Part I) proposes an efficient algorithm for determining the most probable values of modal properties. The method is validated using synthetic and laboratory data. The companion paper (Part II) investigates identification uncertainty and challenges in applications to field vibration data.

  15. Quorum system and random based asynchronous rendezvous protocol for cognitive radio ad hoc networks

    Directory of Open Access Journals (Sweden)

    Sylwia Romaszko

    2013-12-01

    Full Text Available This paper proposes a rendezvous protocol for cognitive radio ad hoc networks, RAC2E-gQS, which utilizes (1 the asynchronous and randomness properties of the RAC2E protocol, and (2 channel mapping protocol, based on a grid Quorum System (gQS, and taking into account channel heterogeneity and asymmetric channel views. We show that the combination of the RAC2E protocol with the grid-quorum based channel mapping can yield a powerful RAC2E-gQS rendezvous protocol for asynchronous operation in a distributed environment assuring a rapid rendezvous between the cognitive radio nodes having available both symmetric and asymmetric channel views. We also propose an enhancement of the protocol, which uses a torus QS for a slot allocation, dealing with the worst case scenario, a large number of channels with opposite ranking lists.

  16. CABARET scheme with conservation-flux asynchronous time-stepping for nonlinear aeroacoustics problems

    Science.gov (United States)

    Semiletov, V. A.; Karabasov, S. A.

    2013-11-01

    Explicit time stepping renders many high-resolution computational schemes to become less efficient when dealing with non-uniform grids typical of many aeroacoustic applications. Asynchronous time stepping, i.e., updating the solution in different cell sizes according to their local rates, is known to be a promising way to improve the efficiency of explicit time-stepping methods without compromise in accuracy. In the present paper, a new asynchronous time-stepping algorithm is developed for the Compact Accurately Boundary-Adjusting high-REsolution Technique (CABARET) Euler method. This allows to significantly speedup the original single-step CABARET method with non-uniform grids and improves its accuracy at the same time. Numerical examples are provided and issues associated with the method performance on various grid resolutions are discussed.

  17. Distributed embedded controller development with petri nets application to globally-asynchronous locally-synchronous systems

    CERN Document Server

    Moutinho, Filipe de Carvalho

    2016-01-01

    This book describes a model-based development approach for globally-asynchronous locally-synchronous distributed embedded controllers.  This approach uses Petri nets as modeling formalism to create platform and network independent models supporting the use of design automation tools.  To support this development approach, the Petri nets class in use is extended with time-domains and asynchronous-channels. The authors’ approach uses models not only providing a better understanding of the distributed controller and improving the communication among the stakeholders, but also to be ready to support the entire lifecycle, including the simulation, the verification (using model-checking tools), the implementation (relying on automatic code generators), and the deployment of the distributed controller into specific platforms. Uses a graphical and intuitive modeling formalism supported by design automation tools; Enables verification, ensuring that the distributed controller was correctly specified; Provides flex...

  18. Intercultural Communication Online: Conversation Analysis and the Investigation of Asynchronous Written Discourse

    Directory of Open Access Journals (Sweden)

    Will Gibson

    2008-10-01

    Full Text Available This paper works through the methodological issues involved in treating "culture" and "interculturality" as interactionally demonstrable and observable phenomena in written online asynchronous discourse. In particular, the paper explores the ways that conversation analysis (CA and its focus on sequentiality and membership categorization analysis might aid the analysis of culture as a textural interactional achievement. The paper argues that, while there are some clear differences between sequential talk and written asynchronous discourse, there are still interesting ways in which CA's analytic foci may be worked through in relation to online discourse. Both the concern with sequentiality and with membership categories may well help us to see how the construction of visible and recognizable intercultural discourse practices are accomplished through written modes in online forums. URN: urn:nbn:de:0114-fqs0901493

  19. An asynchronous spacetime discontinuous Galerkin finite element method for time domain electromagnetics

    Science.gov (United States)

    Abedi, Reza; Mudaliar, Saba

    2017-12-01

    We present an asynchronous spacetime discontinuous Galerkin (aSDG) method for time domain electromagnetics in which space and time are directly discretized. By using differential forms we express Maxwell's equations and consequently their discontinuous Galerkin discretization for arbitrary domains in spacetime. The elements are discretized with electric and magnetic basis functions that are discontinuous across all inter-element boundaries and can have arbitrary high and per element spacetime orders. When restricted to unstructured grids that satisfy a specific causality constraint, the method has a local and asynchronous solution procedure with linear solution complexity in terms of the number of elements. We numerically investigate the convergence properties of the method for 1D to 3D uniform grids for energy dissipation, an error relative to the exact solution, and von Neumann dissipation and dispersion errors. Two dimensional simulations demonstrate the effectiveness of the method in resolving sharp wave fronts.

  20. A low-power asynchronous data-path for a FIR filter bank

    DEFF Research Database (Denmark)

    Nielsen, Lars Skovby; Sparsø, Jens

    1996-01-01

    ways: by reducing the switching activity in the circuit, and by applying adaptive scaling of the supply voltage, in order to exploit the fact that the average case latency as 2-3 times better than the worst case. The paper reports on a study of properties of real life data, and discusses......This paper describes a number of design issues relating to the implementation of low-power asynchronous signal processing circuits. Specifically, the paper addresses the design of a dedicated processor structure that implements an audio FIR filter bank which is part of an industrial application....... The algorithm requires a fixed number of steps and the moderate speed requirement allows a sequential implementation. The latter, in combination with a huge predominance of numerically small data values in the input data stream, is the key to a low-power asynchronous implementation. Power is minimized in two...

  1. Fluka studies of the Asynchronous Beam Dump Effects on LHC Point 6

    CERN Document Server

    Versaci, R; Goddard, B; Mereghetti, A; Schmidt, R; Vlachoudis, V; CERN. Geneva. ATS Department

    2011-01-01

    The LHC is a record-breaking machine for beam energy and intensity. An intense effort has therefore been deployed in simulating critical operational scenarios of energy deposition. Using FLUKA Monte Carlo simulations, we have investigated the effects of an asynchronous beam dump at the LHC Point 6 where beams, with a stored energy of 360 MJ, can instantaneously release up to a few J cm^-3 in the cryogenic magnets which have a quench limit of the order of the mJ cm^-3. In the present paper we will describe the simulation approach, and discuss the evaluated maximum energy release onto the superconducting magnets during an asynchronous beam dump. We will then analyze the shielding provided by collimators installed in the area and discuss safety limits for the operation of the LHC.

  2. Asynchronous cellular automaton-based neuron: theoretical analysis and on-FPGA learning.

    Science.gov (United States)

    Matsubara, Takashi; Torikai, Hiroyuki

    2013-05-01

    A generalized asynchronous cellular automaton-based neuron model is a special kind of cellular automaton that is designed to mimic the nonlinear dynamics of neurons. The model can be implemented as an asynchronous sequential logic circuit and its control parameter is the pattern of wires among the circuit elements that is adjustable after implementation in a field-programmable gate array (FPGA) device. In this paper, a novel theoretical analysis method for the model is presented. Using this method, stabilities of neuron-like orbits and occurrence mechanisms of neuron-like bifurcations of the model are clarified theoretically. Also, a novel learning algorithm for the model is presented. An equivalent experiment shows that an FPGA-implemented learning algorithm enables an FPGA-implemented model to automatically reproduce typical nonlinear responses and occurrence mechanisms observed in biological and model neurons.

  3. Sum rates of asynchronous GFDMA and SC-FDMA for 5G uplink

    Directory of Open Access Journals (Sweden)

    Woojin Park

    2015-12-01

    Full Text Available The fifth generation (5G of mobile communication envisions ultralow latency less than 1 ms for radio interface. To this end, frameless asynchronous multiple access may be needed to allow users to transmit instantly without waiting for the next frame start. In this paper, generalized frequency division multiple-access (GFDMA, one of the promising multiple-access candidates for 5G mobile, is compared with the conventional single-carrier FDMA (SC-FDMA in terms of the uplink sum rate when both techniques are adapted for the asynchronous scenario. In particular, a waveform windowing technique is applied to both schemes to mitigate the inter-user interference due to non-zero out-of-band emission.

  4. Surface-distributed low-frequency asynchronous stimulation delays fatigue of stimulated muscles.

    Science.gov (United States)

    Maneski, Lana Z Popović; Malešević, Nebojša M; Savić, Andrej M; Keller, Thierry; Popović, Dejan B

    2013-12-01

    One important reason why functional electrical stimulation (FES) has not gained widespread clinical use is the limitation imposed by rapid muscle fatigue due to non-physiological activation of the stimulated muscles. We aimed to show that asynchronous low-pulse-rate (LPR) electrical stimulation applied by multipad surface electrodes greatly postpones the occurrence of muscle fatigue compared with conventional stimulation (high pulse rate, HPR). We compared the produced force vs. time of the forearm muscles responsible for finger flexion in 2 stimulation protocols, LPR (fL = 10 Hz) and HPR (fH = 40 Hz). Surface-distributed low-frequency asynchronous stimulation (sDLFAS) doubles the time interval before the onset of fatigue (104 ± 80%) compared with conventional synchronous stimulation. Combining the performance of multipad electrodes (increased selectivity and facilitated positioning) with sDLFAS (decreased fatigue) can improve many FES applications in both the lower and upper extremities. Copyright © 2013 Wiley Periodicals, Inc.

  5. Application of Artificial Intelligence Techniques for the Control of the Asynchronous Machine

    Directory of Open Access Journals (Sweden)

    F. Khammar

    2016-01-01

    Full Text Available The induction machine is experiencing a growing success for two decades by gradually replacing the DC machines and synchronous in many industrial applications. This paper is devoted to the study of advanced methods applied to the command of the asynchronous machine in order to obtain a system of control of high performance. While the criteria for response time, overtaking, and static error can be assured by the techniques of conventional control, the criterion of robustness remains a challenge for researchers. This criterion can be satisfied only by applying advanced techniques of command. After mathematical modeling of the asynchronous machine, it defines the control strategies based on the orientation of the rotor flux. The results of the different simulation tests highlight the properties of robustness of algorithms proposed and suggested to compare the different control strategies.

  6. Asynchronous Magnetic Bead Rotation (AMBR Microviscometer for Label-Free DNA Analysis

    Directory of Open Access Journals (Sweden)

    Yunzi Li

    2014-03-01

    Full Text Available We have developed a label-free viscosity-based DNA detection system, using paramagnetic beads as an asynchronous magnetic bead rotation (AMBR microviscometer. We have demonstrated experimentally that the bead rotation period is linearly proportional to the viscosity of a DNA solution surrounding the paramagnetic bead, as expected theoretically. Simple optical measurement of asynchronous microbead motion determines solution viscosity precisely in microscale volumes, thus allowing an estimate of DNA concentration or average fragment length. The response of the AMBR microviscometer yields reproducible measurement of DNA solutions, enzymatic digestion reactions, and PCR systems at template concentrations across a 5000-fold range. The results demonstrate the feasibility of viscosity-based DNA detection using AMBR in microscale aqueous volumes.

  7. Reducing power consumption while synchronizing a plurality of compute nodes during execution of a parallel application

    Science.gov (United States)

    Archer, Charles J [Rochester, MN; Blocksome, Michael A [Rochester, MN; Peters, Amanda A [Rochester, MN; Ratterman, Joseph D [Rochester, MN; Smith, Brian E [Rochester, MN

    2012-01-10

    Methods, apparatus, and products are disclosed for reducing power consumption while synchronizing a plurality of compute nodes during execution of a parallel application that include: beginning, by each compute node, performance of a blocking operation specified by the parallel application, each compute node beginning the blocking operation asynchronously with respect to the other compute nodes; reducing, for each compute node, power to one or more hardware components of that compute node in response to that compute node beginning the performance of the blocking operation; and restoring, for each compute node, the power to the hardware components having power reduced in response to all of the compute nodes beginning the performance of the blocking operation.

  8. A Scalable Parallel PWTD-Accelerated SIE Solver for Analyzing Transient Scattering from Electrically Large Objects

    KAUST Repository

    Liu, Yang

    2015-12-17

    A scalable parallel plane-wave time-domain (PWTD) algorithm for efficient and accurate analysis of transient scattering from electrically large objects is presented. The algorithm produces scalable communication patterns on very large numbers of processors by leveraging two mechanisms: (i) a hierarchical parallelization strategy to evenly distribute the computation and memory loads at all levels of the PWTD tree among processors, and (ii) a novel asynchronous communication scheme to reduce the cost and memory requirement of the communications between the processors. The efficiency and accuracy of the algorithm are demonstrated through its applications to the analysis of transient scattering from a perfect electrically conducting (PEC) sphere with a diameter of 70 wavelengths and a PEC square plate with a dimension of 160 wavelengths. Furthermore, the proposed algorithm is used to analyze transient fields scattered from realistic airplane and helicopter models under high frequency excitation.

  9. Synchronization of Hierarchical Time-Varying Neural Networks Based on Asynchronous and Intermittent Sampled-Data Control.

    Science.gov (United States)

    Xiong, Wenjun; Patel, Ragini; Cao, Jinde; Zheng, Wei Xing

    In this brief, our purpose is to apply asynchronous and intermittent sampled-data control methods to achieve the synchronization of hierarchical time-varying neural networks. The asynchronous and intermittent sampled-data controllers are proposed for two reasons: 1) the controllers may not transmit the control information simultaneously and 2) the controllers cannot always exist at any time . The synchronization is then discussed for a kind of hierarchical time-varying neural networks based on the asynchronous and intermittent sampled-data controllers. Finally, the simulation results are given to illustrate the usefulness of the developed criteria.In this brief, our purpose is to apply asynchronous and intermittent sampled-data control methods to achieve the synchronization of hierarchical time-varying neural networks. The asynchronous and intermittent sampled-data controllers are proposed for two reasons: 1) the controllers may not transmit the control information simultaneously and 2) the controllers cannot always exist at any time . The synchronization is then discussed for a kind of hierarchical time-varying neural networks based on the asynchronous and intermittent sampled-data controllers. Finally, the simulation results are given to illustrate the usefulness of the developed criteria.

  10. Determining sociability, social space, and social presence in (A)synchronous collaborative groups

    OpenAIRE

    Kreijns, K.; Kirschner, P.A.; Jochems, W.; Buuren, H. van

    2004-01-01

    The effectiveness of group learning in asynchronous distributed learning groups depends on the social interaction that takes place. This social interaction affects both cognitive and socioemotional processes that take place during learning, group forming, establishment of group structures, and group dynamics. Though now known to be important, this aspect is often ignored, denied or forgotten by educators and researchers who tend to concentrate on cognitive processes and on-task contexts. This...

  11. Effects of asynchronous music on flow states and shooting performance among netball players

    OpenAIRE

    Pates, J; Karageorghis, CI; Fryer, R; Maynard, I

    2003-01-01

    Objectives: To examine the effects of self-selected asynchronous (background) music on flow and netball shooting performance in three netball players. Based on the research of it was hypothesized that music would promote flow and would therefore have a positive impact on netball shooting performance.Design: An idiographic single-subject multiple baselines across-subjects design was employed (). The rationale centred upon the work of who indicated that single-subject designs were the most appr...

  12. Commande multivariable du moteur asynchrone triphasé à cage par ...

    African Journals Online (AJOL)

    La commande du moteur asynchrone triphasé à cage alimenté par des convertisseurs est traitée comme celle d'un système multivariable. L'étude du comportement du moteur a été réalisée en simulation, avec différentes valeurs de la fréquence d'alimentation, pour justifier le choix de l'onduleur. Le programme de ...

  13. Differential effects of synchronous and asynchronous multifinger coactivation on human tactile performance

    Directory of Open Access Journals (Sweden)

    Dinse Hubert R

    2007-07-01

    Full Text Available Abstract Background Repeated execution of a tactile task enhances task performance. In the present study we sought to improve tactile performance with unattended activation-based learning processes (i.e., focused stimulation of dermal receptors evoking neural coactivation (CA. Previous studies show that the application of CA to a single finger reduced the stationary two-point discrimination threshold and significantly increased tactile acuity. These changes were accompanied by an expansion of the cortical finger representation in primary somatosensory cortex (SI. Here we investigated the effect of different types of multifinger CA on the tactile performance of each finger of the right hand. Results Synchronous and asynchronous CA was applied to all fingers of a subject's dominant hand. We evaluated changes in absolute touch thresholds, static two-point discrimination thresholds, and mislocalization of tactile stimuli to the fingertips. After synchronous CA, tactile acuity improved (i.e., discrimination thresholds decreased and the frequency of mislocalization of tactile stimuli changed from directly neighboring fingers to more distant fingers. On the other hand, asynchronous CA did not significant improve tactile acuity. In fact, there was evidence of impaired tactile acuity. Multifinger CA with synchronous or asynchronous stimulation did not significantly alter absolute touch thresholds. Conclusion Our results demonstrate that it is possible to extend tactile CA to all fingers of a hand. The observed changes in mislocalization of tactile stimuli after synchronous CA indicate changes in the topography of the cortical hand representation. Although single-finger CA has been shown to improve tactile acuity, asynchronous CA of all fingers of the hand had the opposite effect, suggesting the need for synchrony in multifinger CA for improving tactile acuity.

  14. Synaptotagmin-7 is an asynchronous calcium sensor for synaptic transmission in neurons expressing SNAP-23.

    Science.gov (United States)

    Weber, Jens P; Toft-Bertelsen, Trine L; Mohrmann, Ralf; Delgado-Martinez, Ignacio; Sørensen, Jakob B

    2014-01-01

    Synchronization of neurotransmitter release with the presynaptic action potential is essential for maintaining fidelity of information transfer in the central nervous system. However, synchronous release is frequently accompanied by an asynchronous release component that builds up during repetitive stimulation, and can even play a dominant role in some synapses. Here, we show that substitution of SNAP-23 for SNAP-25 in mouse autaptic glutamatergic hippocampal neurons results in asynchronous release and a higher frequency of spontaneous release events (mEPSCs). Use of neurons from double-knock-out (SNAP-25, synaptotagmin-7) mice in combination with viral transduction showed that SNAP-23-driven release is triggered by endogenous synaptotagmin-7. In the absence of synaptotagmin-7 release became even more asynchronous, and the spontaneous release rate increased even more, indicating that synaptotagmin-7 acts to synchronize release and suppress spontaneous release. However, compared to synaptotagmin-1, synaptotagmin-7 is a both leaky and asynchronous calcium sensor. In the presence of SNAP-25, consequences of the elimination of synaptotagmin-7 were small or absent, indicating that the protein pairs SNAP-25/synaptotagmin-1 and SNAP-23/synaptotagmin-7 might act as mutually exclusive calcium sensors. Expression of fusion proteins between pHluorin (pH-sensitive GFP) and synaptotagmin-1 or -7 showed that vesicles that fuse using the SNAP-23/synaptotagmin-7 combination contained synaptotagmin-1, while synaptotagmin-7 barely displayed activity-dependent trafficking between vesicle and plasma membrane, implying that it acts as a plasma membrane calcium sensor. Overall, these findings support the idea of alternative syt∶SNARE combinations driving release with different kinetics and fidelity.

  15. The design of high performance asynchronous circuits for the Caltech MiniMIPS processor

    OpenAIRE

    Pénzes, Paul I.

    1998-01-01

    The purpose of this report is to describe the design and implementation of an asynchronous Fetch unit used in the high-performance Caltech MiniMIPS microprocesors. The Caltech MiniMIPS microprocesors was designed based on the Martin synthesis techniques. The main goals of this project were to investigate new architectural issues in asyncronous processor design and to develop new techniques and tools that can meet high throughput requirements.

  16. A Coordinate Descent Primal-Dual Algorithm and Application to Distributed Asynchronous Optimization

    OpenAIRE

    Bianchi, Pascal; Hachem, Walid; Iutzeler, Franck

    2016-01-01

    10 pages; International audience; Based on the idea of randomized coordinate descent of $\\alpha$-averaged operators, a randomized primal-dual optimization algorithm is introduced, where a random subset of coordinates is updated at each iteration. The algorithm builds upon a variant of a recent (deterministic) algorithm proposed by Vũ and Condat that includes the well known ADMM as a particular case. The obtained algorithm is used to solve asynchronously a distributed optimization problem. A n...

  17. Parallel Architectures and Bioinspired Algorithms

    CERN Document Server

    Pérez, José; Lanchares, Juan

    2012-01-01

    This monograph presents examples of best practices when combining bioinspired algorithms with parallel architectures. The book includes recent work by leading researchers in the field and offers a map with the main paths already explored and new ways towards the future. Parallel Architectures and Bioinspired Algorithms will be of value to both specialists in Bioinspired Algorithms, Parallel and Distributed Computing, as well as computer science students trying to understand the present and the future of Parallel Architectures and Bioinspired Algorithms.

  18. Parallel Eclipse Project Checkout

    Science.gov (United States)

    Crockett, Thomas M.; Joswig, Joseph C.; Shams, Khawaja S.; Powell, Mark W.; Bachmann, Andrew G.

    2011-01-01

    Parallel Eclipse Project Checkout (PEPC) is a program written to leverage parallelism and to automate the checkout process of plug-ins created in Eclipse RCP (Rich Client Platform). Eclipse plug-ins can be aggregated in a feature project. This innovation digests a feature description (xml file) and automatically checks out all of the plug-ins listed in the feature. This resolves the issue of manually checking out each plug-in required to work on the project. To minimize the amount of time necessary to checkout the plug-ins, this program makes the plug-in checkouts parallel. After parsing the feature, a request to checkout for each plug-in in the feature has been inserted. These requests are handled by a thread pool with a configurable number of threads. By checking out the plug-ins in parallel, the checkout process is streamlined before getting started on the project. For instance, projects that took 30 minutes to checkout now take less than 5 minutes. The effect is especially clear on a Mac, which has a network monitor displaying the bandwidth use. When running the client from a developer s home, the checkout process now saturates the bandwidth in order to get all the plug-ins checked out as fast as possible. For comparison, a checkout process that ranged from 8-200 Kbps from a developer s home is now able to saturate a pipe of 1.3 Mbps, resulting in significantly faster checkouts. Eclipse IDE (integrated development environment) tries to build a project as soon as it is downloaded. As part of another optimization, this innovation programmatically tells Eclipse to stop building while checkouts are happening, which dramatically reduces lock contention and enables plug-ins to continue downloading until all of them finish. Furthermore, the software re-enables automatic building, and forces Eclipse to do a clean build once it finishes checking out all of the plug-ins. This software is fully generic and does not contain any NASA-specific code. It can be applied to any

  19. Asynchronous replication and autosome-pair non-equivalence in human embryonic stem cells.

    Directory of Open Access Journals (Sweden)

    Devkanya Dutta

    Full Text Available A number of mammalian genes exhibit the unusual properties of random monoallelic expression and random asynchronous replication. Such exceptional genes include genes subject to X inactivation and autosomal genes including odorant receptors, immunoglobulins, interleukins, pheromone receptors, and p120 catenin. In differentiated cells, random asynchronous replication of interspersed autosomal genes is coordinated at the whole chromosome level, indicative of chromosome-pair non-equivalence. Here we have investigated the replication pattern of the random asynchronously replicating genes in undifferentiated human embryonic stem cells, using fluorescence in situ hybridization based assay. We show that allele-specific replication of X-linked genes and random monoallelic autosomal genes occur in human embryonic stem cells. The direction of replication is coordinated at the whole chromosome level and can cross the centromere, indicating the existence of autosome-pair non-equivalence in human embryonic stem cells. These results suggest that epigenetic mechanism(s that randomly distinguish between two parental alleles are emerging in the cells of the inner cell mass, the source of human embryonic stem cells.

  20. Two-Particle Asynchronous Quantum Correlation: Wavefunction Collapse Acting as a Beamsplitter

    Science.gov (United States)

    Kowalski, F. V.; Browne, R. S.

    2016-03-01

    A two-body quantum correlation is calculated for a particle reflecting from a moving mirror. Correlated interference results when the incident and reflected particle substates and their associated mirror substates overlap. Using the Copenhagen interpretation of measurement, an asynchronous joint probability density (PDF), which is a function both of the different positions and different times at which the particle and mirror are measured, is derived assuming that no interaction occurs between each measurement. Measurement of the particle first, in the correlated interference region, results in a splitting of the mirror substate into ones which have and have not reflected the particle. An analog of the interference from the Doppler effect for only measurements of the particle (a marginal PDF), in this two-body system, is shown to be a consequence of the asynchronous measurement. The simplification obtained for a microscopic particle reflecting from a mesoscopic or macroscopic mirror is used to illustrate asynchronous correlation interferometry. In this case, the small displacement between these mirror states can yield negligible environmental decoherence times. In addition, interference of these mirror states does not vanish in the limit of large mirror mass due to the small momentum exchange in reflecting a microscopic particle.

  1. A Methodology for the Design and Verification of Globally Asynchronous/Locally Synchronous Architectures

    Science.gov (United States)

    Miller, Steven P.; Whalen, Mike W.; O'Brien, Dan; Heimdahl, Mats P.; Joshi, Anjali

    2005-01-01

    Recent advanced in model-checking have made it practical to formally verify the correctness of many complex synchronous systems (i.e., systems driven by a single clock). However, many computer systems are implemented by asynchronously composing several synchronous components, where each component has its own clock and these clocks are not synchronized. Formal verification of such Globally Asynchronous/Locally Synchronous (GA/LS) architectures is a much more difficult task. In this report, we describe a methodology for developing and reasoning about such systems. This approach allows a developer to start from an ideal system specification and refine it along two axes. Along one axis, the system can be refined one component at a time towards an implementation. Along the other axis, the behavior of the system can be relaxed to produce a more cost effective but still acceptable solution. We illustrate this process by applying it to the synchronization logic of a Dual Fight Guidance System, evolving the system from an ideal case in which the components do not fail and communicate synchronously to one in which the components can fail and communicate asynchronously. For each step, we show how the system requirements have to change if the system is to be implemented and prove that each implementation meets the revised system requirements through modelchecking.

  2. Diagnosis of hearing loss using automated audiometry in an asynchronous telehealth model: A pilot accuracy study.

    Science.gov (United States)

    Brennan-Jones, Christopher G; Eikelboom, Robert H; Swanepoel, De Wet

    2017-02-01

    Introduction Standard criteria exist for diagnosing different types of hearing loss, yet audiologists interpret audiograms manually. This pilot study examined the feasibility of standardised interpretations of audiometry in a telehealth model of care. The aim of this study was to examine diagnostic accuracy of automated audiometry in adults with hearing loss in an asynchronous telehealth model using pre-defined diagnostic protocols. Materials and methods We recruited 42 study participants from a public audiology and otolaryngology clinic in Perth, Western Australia. Manual audiometry was performed by an audiologist either before or after automated audiometry. Diagnostic protocols were applied asynchronously for normal hearing, disabling hearing loss, conductive hearing loss and unilateral hearing loss. Sensitivity and specificity analyses were conducted using a two-by-two matrix and Cohen's kappa was used to measure agreement. Results The overall sensitivity for the diagnostic criteria was 0.88 (range: 0.86-1) and overall specificity was 0.93 (range: 0.86-0.97). Overall kappa ( k) agreement was 'substantial' k = 0.80 (95% confidence interval (CI) 0.70-0.89) and significant at p audiometry provide accurate identification of disabling, conductive and unilateral hearing loss. This method has the potential to improve synchronous and asynchronous tele-audiology service delivery.

  3. A Scalable Multicore Architecture With Heterogeneous Memory Structures for Dynamic Neuromorphic Asynchronous Processors (DYNAPs).

    Science.gov (United States)

    Moradi, Saber; Qiao, Ning; Stefanini, Fabio; Indiveri, Giacomo

    2018-02-01

    Neuromorphic computing systems comprise networks of neurons that use asynchronous events for both computation and communication. This type of representation offers several advantages in terms of bandwidth and power consumption in neuromorphic electronic systems. However, managing the traffic of asynchronous events in large scale systems is a daunting task, both in terms of circuit complexity and memory requirements. Here, we present a novel routing methodology that employs both hierarchical and mesh routing strategies and combines heterogeneous memory structures for minimizing both memory requirements and latency, while maximizing programming flexibility to support a wide range of event-based neural network architectures, through parameter configuration. We validated the proposed scheme in a prototype multicore neuromorphic processor chip that employs hybrid analog/digital circuits for emulating synapse and neuron dynamics together with asynchronous digital circuits for managing the address-event traffic. We present a theoretical analysis of the proposed connectivity scheme, describe the methods and circuits used to implement such scheme, and characterize the prototype chip. Finally, we demonstrate the use of the neuromorphic processor with a convolutional neural network for the real-time classification of visual symbols being flashed to a dynamic vision sensor (DVS) at high speed.

  4. Synchronous and Asynchronous E-Language Learning: A Case Study of Virtual University of Pakistan

    Directory of Open Access Journals (Sweden)

    Ayesha Perveen

    2016-03-01

    Full Text Available This case study evaluated the impact of synchronous and asynchronous E-Language Learning activities (ELL-tivities in an E-Language Learning Environment (ELLE at Virtual University of Pakistan. The purpose of the study was to assess e-language learning analytics based on the constructivist approach of collaborative construction of knowledge. The courses selected for random sampling were English Comprehension (Eng101, Business & Technical English (Eng201 and Business Communication (Eng301. Three methods were employed to collect the data: observation of the communication and performance on given channels, students’ opinions on Graded Discussion Board (GDB, and a survey questionnaire. Out of a total population of 9919, 1025 responses were received for the survey questionnaire. The findings revealed that asynchronous e-language learning was quite beneficial for second language (L2 learners, but with some limitations which could be scaffolded by synchronous sessions. Based on the findings, the researcher suggested a blend of both synchronous and asynchronous paradigms to create an ideal environment for e-language learning in Pakistan.

  5. An Asynchronous Multi-Sensor Micro Control Unit for Wireless Body Sensor Networks (WBSNs

    Directory of Open Access Journals (Sweden)

    Ching-Hsing Luo

    2011-07-01

    Full Text Available In this work, an asynchronous multi-sensor micro control unit (MCU core is proposed for wireless body sensor networks (WBSNs. It consists of asynchronous interfaces, a power management unit, a multi-sensor controller, a data encoder (DE, and an error correct coder (ECC. To improve the system performance and expansion abilities, the asynchronous interface is created for handshaking different clock domains between ADC and RF with MCU. To increase the use time of the WBSN system, a power management technique is developed for reducing power consumption. In addition, the multi-sensor controller is designed for detecting various biomedical signals. To prevent loss error from wireless transmission, use of an error correct coding technique is important in biomedical applications. The data encoder is added for lossless compression of various biomedical signals with a compression ratio of almost three. This design is successfully tested on a FPGA board. The VLSI architecture of this work contains 2.68-K gate counts and consumes power 496-μW at 133-MHz processing rate by using TSMC 0.13-μm CMOS process. Compared with the previous techniques, this work offers higher performance, more functions, and lower hardware cost than other micro controller designs.

  6. Learning Management System Development with Application of Asynchronous Learning Method in STMIK IBBI Medan

    Directory of Open Access Journals (Sweden)

    Marwa Halim

    2015-10-01

    Full Text Available This article will explain asynchronous learn- ing system using attractive discussion forums and video teaching materials features for user so that the devel- opment of both features will increase e-learning system usage by students and lecturers which can eventually im- prove the students’ absorption on the provided teaching materials, increase the active participation of students, improve self-learning ability, and to improve the quality of learning materials. The method used in this study by distributing questionnaires in online form to stakeholders users consisting of lecturers and students with the num- ber of respondents is 225 people and author use model ADDIE which focuses on Analysis, Design, Development, Implementation and Evaluation as development design. Results of this study is an application of web-based asynchronous learning which can be used by students and lecturers with the results of the application evaluation is based on a survey to students and lecturers. From this study, can be concluded that to support online learning with asynchronous method using the video learning feature in online lecture needs to be developed in order to support the science transformation process from lecturers to students. Attractive video teaching  materials  model for students has characteristics such as screen shots and presentation models.

  7. DIRECT FREQUENCY CONVERTER WITH ARTIFICIAL AND NATURAL COMMUTATION FOR BRUSHLESS ASYNCHRONIZED MACHINES

    Directory of Open Access Journals (Sweden)

    А.М. Galynovskiy

    2015-11-01

    Full Text Available The comparative analysis of direct frequency converters with artificial and natural- switching term of the cyclical control algorithm is presented; the recommendations for their using in brushless asynchronized machines with three-phase winding are developed. Converters with a limited number of full-controlled valves have large losses in safety circuits of gates, they can be used in system of automatic excitation control. The best quality of voltage and current load are provided by converters with natural commutation using modulated input voltage, the combined potential compounds windings supply and the combined method of thyristor controlling. When the load is divided into two three-phase groups, an even number of phases of the power supply for single phase of the load are applied the bridge converter circuit. Regulation of the load current is carried out by the excitation current of field exciters and by the control angle of thyristor. Converters can be used in high-power asynchronized motors and generators. In asynchronized compensators it is possible to use diode-thyristor converters without transmitting the control signals to the rotating part. The frequency converters without modulation of input voltage have the smallest increase in rated capacity of power supply. However, they have a low quality form of the output voltage at high power factor of load.

  8. A Parallel Butterfly Algorithm

    KAUST Repository

    Poulson, Jack

    2014-02-04

    The butterfly algorithm is a fast algorithm which approximately evaluates a discrete analogue of the integral transform (Equation Presented.) at large numbers of target points when the kernel, K(x, y), is approximately low-rank when restricted to subdomains satisfying a certain simple geometric condition. In d dimensions with O(Nd) quasi-uniformly distributed source and target points, when each appropriate submatrix of K is approximately rank-r, the running time of the algorithm is at most O(r2Nd logN). A parallelization of the butterfly algorithm is introduced which, assuming a message latency of α and per-process inverse bandwidth of β, executes in at most (Equation Presented.) time using p processes. This parallel algorithm was then instantiated in the form of the open-source DistButterfly library for the special case where K(x, y) = exp(iΦ(x, y)), where Φ(x, y) is a black-box, sufficiently smooth, real-valued phase function. Experiments on Blue Gene/Q demonstrate impressive strong-scaling results for important classes of phase functions. Using quasi-uniform sources, hyperbolic Radon transforms, and an analogue of a three-dimensional generalized Radon transform were, respectively, observed to strong-scale from 1-node/16-cores up to 1024-nodes/16,384-cores with greater than 90% and 82% efficiency, respectively. © 2014 Society for Industrial and Applied Mathematics.

  9. Massively Parallel QCD

    Energy Technology Data Exchange (ETDEWEB)

    Soltz, R; Vranas, P; Blumrich, M; Chen, D; Gara, A; Giampap, M; Heidelberger, P; Salapura, V; Sexton, J; Bhanot, G

    2007-04-11

    The theory of the strong nuclear force, Quantum Chromodynamics (QCD), can be numerically simulated from first principles on massively-parallel supercomputers using the method of Lattice Gauge Theory. We describe the special programming requirements of lattice QCD (LQCD) as well as the optimal supercomputer hardware architectures that it suggests. We demonstrate these methods on the BlueGene massively-parallel supercomputer and argue that LQCD and the BlueGene architecture are a natural match. This can be traced to the simple fact that LQCD is a regular lattice discretization of space into lattice sites while the BlueGene supercomputer is a discretization of space into compute nodes, and that both are constrained by requirements of locality. This simple relation is both technologically important and theoretically intriguing. The main result of this paper is the speedup of LQCD using up to 131,072 CPUs on the largest BlueGene/L supercomputer. The speedup is perfect with sustained performance of about 20% of peak. This corresponds to a maximum of 70.5 sustained TFlop/s. At these speeds LQCD and BlueGene are poised to produce the next generation of strong interaction physics theoretical results.

  10. Theory of Parallel Mechanisms

    CERN Document Server

    Huang, Zhen; Ding, Huafeng

    2013-01-01

    This book contains mechanism analysis and synthesis. In mechanism analysis, a mobility methodology is first systematically presented. This methodology, based on the author's screw theory, proposed in 1997, of which the generality and validity was only proved recently,  is a very complex issue, researched by various scientists over the last 150 years. The principle of kinematic influence coefficient and its latest developments are described. This principle is suitable for kinematic analysis of various 6-DOF and lower-mobility parallel manipulators. The singularities are classified by a new point of view, and progress in position-singularity and orientation-singularity is stated. In addition, the concept of over-determinate input is proposed and a new method of force analysis based on screw theory is presented. In mechanism synthesis, the synthesis for spatial parallel mechanisms is discussed, and the synthesis method of difficult 4-DOF and 5-DOF symmetric mechanisms, which was first put forward by the a...

  11. Fast parallel event reconstruction

    CERN Multimedia

    CERN. Geneva

    2010-01-01

    On-line processing of large data volumes produced in modern HEP experiments requires using maximum capabilities of modern and future many-core CPU and GPU architectures.One of such powerful feature is a SIMD instruction set, which allows packing several data items in one register and to operate on all of them, thus achievingmore operations per clock cycle. Motivated by the idea of using the SIMD unit ofmodern processors, the KF based track fit has been adapted for parallelism, including memory optimization, numerical analysis, vectorization with inline operator overloading, and optimization using SDKs. The speed of the algorithm has been increased in 120000 times with 0.1 ms/track, running in parallel on 16 SPEs of a Cell Blade computer.  Running on a Nehalem CPU with 8 cores it shows the processing speed of 52 ns/track using the Intel Threading Building Blocks. The same KF algorithm running on an Nvidia GTX 280 in the CUDA frameworkprovi...

  12. SELECTION OF METHOD FOR REGULATION OF TRACTOR PROPULSION ASYNCHRONOUS ELECTRIC MOTOR AND CONSTRUCTION OF MECHANICAL CHARACTERISTICS

    Directory of Open Access Journals (Sweden)

    Ch. I. Zhdanovich

    2015-01-01

    Full Text Available Nowadays the work is in progress to develop wheeled and caterpillar tractors with electromechanical transmission. Range of changes in transmission gear ratio while using propulsion electric motor depends on mechanical characteristics of a tractor propulsion electric motor which is equipped with electromechanical transmission. In case when the range is rather high then it is possible to minimize number of gearings in the tractor gearing box or exclude its usage at all. Type of the applied propulsion electric motor and regulation method specify type of mechanical characteristics (characteristics family of the propulsion electric motor.The paper considers a propulsion asynchronous electric motor with frequency control. While using frequency control it is possible to regulate electric motor revolutions by mutual changes in voltage and voltage frequency. There are various laws of mutual changes in voltage and frequency (regulation laws. Selection of a regulation law influences on type of mechanical characteristics of a propulsion electric motor. Application of any law can be admissible only for some specific range of voltage frequency otherwise it is possible to exceed some parameters (for example, admissible voltage in the winding of electric motor stator. It is necessary to ensure the required moment within wide range for a tractor propulsion electric motor. In this case losses in the electric motor must be minimal. Losses in the rotor of the propulsion asynchronous electric motor are directly proportional to its sliding and its best propulsion and mechanical properties of a mobile machine will be ensured in the case when sliding is preserved at a constant value. According to these reasons selection of regulation laws has been carried out for operation of the propulsion asynchronous electric motor with nominal sliding and mechanical characteristics at nominal sliding is conventionally called a nominal characteristics.The paper analyzes the possible

  13. C++ and Massively Parallel Computers

    Directory of Open Access Journals (Sweden)

    Daniel J. Lickly

    1993-01-01

    Full Text Available Our goal is to apply the software engineering advantages of object-oriented programming to the raw power of massively parallel architectures. To do this we have constructed a hierarchy of C++ classes to support the data-parallel paradigm. Feasibility studies and initial coding can be supported by any serial machine that has a C++ compiler. Parallel execution requires an extended Cfront, which understands the data-parallel classes and generates C* code. (C* is a data-parallel superset of ANSI C developed by Thinking Machines Corporation. This approach provides potential portability across parallel architectures and leverages the existing compiler technology for translating data-parallel programs onto both SIMD and MIMD hardware.

  14. Computer Assisted Parallel Program Generation

    CERN Document Server

    Kawata, Shigeo

    2015-01-01

    Parallel computation is widely employed in scientific researches, engineering activities and product development. Parallel program writing itself is not always a simple task depending on problems solved. Large-scale scientific computing, huge data analyses and precise visualizations, for example, would require parallel computations, and the parallel computing needs the parallelization techniques. In this Chapter a parallel program generation support is discussed, and a computer-assisted parallel program generation system P-NCAS is introduced. Computer assisted problem solving is one of key methods to promote innovations in science and engineering, and contributes to enrich our society and our life toward a programming-free environment in computing science. Problem solving environments (PSE) research activities had started to enhance the programming power in 1970's. The P-NCAS is one of the PSEs; The PSE concept provides an integrated human-friendly computational software and hardware system to solve a target ...

  15. Parallel Polarization State Generation

    CERN Document Server

    She, Alan

    2016-01-01

    The control of polarization, an essential property of light, is of wide scientific and technological interest. The general problem of generating arbitrary time-varying states of polarization (SOP) has always been mathematically formulated by a series of linear transformations, i.e. a product of matrices, imposing a serial architecture. Here we show a parallel architecture described by a sum of matrices. The theory is experimentally demonstrated by modulating spatially-separated polarization components of a laser using a digital micromirror device that are subsequently beam combined. This method greatly expands the parameter space for engineering devices that control polarization. Consequently, performance characteristics, such as speed, stability, and spectral range, are entirely dictated by the technologies of optical intensity modulation, including absorption, reflection, emission, and scattering. This opens up important prospects for polarization state generation (PSG) with unique performance characteristi...

  16. About Parallel Programming: Paradigms, Parallel Execution and Collaborative Systems

    Directory of Open Access Journals (Sweden)

    Loredana MOCEAN

    2009-01-01

    Full Text Available In the last years, there were made efforts for delineation of a stabile and unitary frame, where the problems of logical parallel processing must find solutions at least at the level of imperative languages. The results obtained by now are not at the level of the made efforts. This paper wants to be a little contribution at these efforts. We propose an overview in parallel programming, parallel execution and collaborative systems.

  17. Topic 7: parallel computer architecture and instruction level parallelism

    OpenAIRE

    Ayguadé Parra, Eduard; Wolfgang, Kark; De Bosschere, Koen; Francois, Jean Collard

    2006-01-01

    We welcome you to the two Parallel Computer Architecture and Instruction Level Parallelism sessions of Euro-Par 2006 conference being held in Dresden, Germany. The call for papers for this Euro-Par topic area sought papers on all hardware/software aspects of parallel computer architecture, processor architecture and microarchitecture. This year 12 papers were submitted to this topic area. Among the submissions, 5 papers were accepted as full papers for the conference (41% acceptance rate). ...

  18. Asynchronous P300-based brain-computer interface to control a virtual environment: initial tests on end users.

    Science.gov (United States)

    Aloise, Fabio; Schettini, Francesca; Aricò, Pietro; Salinari, Serenella; Guger, Christoph; Rinsma, Johanna; Aiello, Marco; Mattia, Donatella; Cincotti, Febo

    2011-10-01

    Motor disability and/or ageing can prevent individuals from fully enjoying home facilities, thus worsening their quality of life. Advances in the field of accessible user interfaces for domotic appliances can represent a valuable way to improve the independence of these persons. An asynchronous P300-based Brain-Computer Interface (BCI) system was recently validated with the participation of healthy young volunteers for environmental control. In this study, the asynchronous P300-based BCI for the interaction with a virtual home environment was tested with the participation of potential end-users (clients of a Frisian home care organization) with limited autonomy due to ageing and/or motor disabilities. System testing revealed that the minimum number of stimulation sequences needed to achieve correct classification had a higher intra-subject variability in potential end-users with respect to what was previously observed in young controls. Here we show that the asynchronous modality performed significantly better as compared to the synchronous mode in continuously adapting its speed to the users' state. Furthermore, the asynchronous system modality confirmed its reliability in avoiding misclassifications and false positives, as previously shown in young healthy subjects. The asynchronous modality may contribute to filling the usability gap between BCI systems and traditional input devices, representing an important step towards their use in the activities of daily living.

  19. An Asynchronous Low Power and High Performance VLSI Architecture for Viterbi Decoder Implemented with Quasi Delay Insensitive Templates.

    Science.gov (United States)

    Devi, T Kalavathi; Palaniappan, Sakthivel

    2015-01-01

    Convolutional codes are comprehensively used as Forward Error Correction (FEC) codes in digital communication systems. For decoding of convolutional codes at the receiver end, Viterbi decoder is often used to have high priority. This decoder meets the demand of high speed and low power. At present, the design of a competent system in Very Large Scale Integration (VLSI) technology requires these VLSI parameters to be finely defined. The proposed asynchronous method focuses on reducing the power consumption of Viterbi decoder for various constraint lengths using asynchronous modules. The asynchronous designs are based on commonly used Quasi Delay Insensitive (QDI) templates, namely, Precharge Half Buffer (PCHB) and Weak Conditioned Half Buffer (WCHB). The functionality of the proposed asynchronous design is simulated and verified using Tanner Spice (TSPICE) in 0.25 µm, 65 nm, and 180 nm technologies of Taiwan Semiconductor Manufacture Company (TSMC). The simulation result illustrates that the asynchronous design techniques have 25.21% of power reduction compared to synchronous design and work at a speed of 475 MHz.

  20. An Asynchronous Low Power and High Performance VLSI Architecture for Viterbi Decoder Implemented with Quasi Delay Insensitive Templates

    Directory of Open Access Journals (Sweden)

    T. Kalavathi Devi

    2015-01-01

    Full Text Available Convolutional codes are comprehensively used as Forward Error Correction (FEC codes in digital communication systems. For decoding of convolutional codes at the receiver end, Viterbi decoder is often used to have high priority. This decoder meets the demand of high speed and low power. At present, the design of a competent system in Very Large Scale Integration (VLSI technology requires these VLSI parameters to be finely defined. The proposed asynchronous method focuses on reducing the power consumption of Viterbi decoder for various constraint lengths using asynchronous modules. The asynchronous designs are based on commonly used Quasi Delay Insensitive (QDI templates, namely, Precharge Half Buffer (PCHB and Weak Conditioned Half Buffer (WCHB. The functionality of the proposed asynchronous design is simulated and verified using Tanner Spice (TSPICE in 0.25 µm, 65 nm, and 180 nm technologies of Taiwan Semiconductor Manufacture Company (TSMC. The simulation result illustrates that the asynchronous design techniques have 25.21% of power reduction compared to synchronous design and work at a speed of 475 MHz.