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Sample records for artichoke mottled crinckle

  1. High-level HIV-1 Nef transient expression in Nicotiana benthamiana using the P19 gene silencing suppressor protein of Artichoke Mottled Crinckle Virus

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    Bianco Linda

    2009-11-01

    Full Text Available Abstract Background In recent years, different HIV antigens have been successfully expressed in plants by either stable transformation or transient expression systems. Among HIV proteins, Nef is considered a promising target for the formulation of a multi-component vaccine due to its implication in the first steps of viral infection. Attempts to express Nef as a single protein product (not fused to a stabilizing protein in transgenic plants resulted in disappointingly low yields (about 0.5% of total soluble protein. In this work we describe a transient expression system based on co-agroinfiltration of plant virus gene silencing suppressor proteins in Nicotiana benthamiana, followed by a two-step affinity purification protocol of plant-derived Nef. Results The effect of three gene silencing viral suppressor proteins (P25 of Potato Virus X, P19 of either Artichoke Mottled Crinckle virus and Tomato Bushy Stunt virus on Nef transient expression yield was evaluated. The P19 protein of Artichoke Mottled Crinckle virus (AMCV-P19 gave the highest expression yield in vacuum co-agroinfiltration experiments reaching 1.3% of total soluble protein, a level almost three times higher than that previously reported in stable transgenic plants. The high yield observed in the co-agroinfiltrated plants was correlated to a remarkable decrease of Nef-specific small interfering RNAs (siRNAs indicating an effective modulation of RNA silencing mechanisms by AMCV-P19. Interestingly, we also showed that expression levels in top leaves of vacuum co-agroinfiltrated plants were noticeably reduced compared to bottom leaves. Moreover, purification of Nef from agroinfiltrated tissue was achieved by a two-step immobilized metal ion affinity chromatography protocol with yields of 250 ng/g of fresh tissue. Conclusion We demonstrated that expression level of HIV-1 Nef in plant can be improved using a transient expression system enhanced by the AMCV-P19 gene silencing suppressor

  2. Fructans of Jerusalem artichokes

    DEFF Research Database (Denmark)

    Rumessen, J J; Bodé, S; Hamberg, O;

    1990-01-01

    Fructans are naturally occurring plant oligosaccharides with sweetening properties. Fructans (FAs) isolated from Jerusalem artichokes (Helianthus tuberosus) were studied with respect to intestinal handling and influence on blood glucose (BG), insulin, and C-peptide responses in eight healthy...

  3. Chlorotic mottle of bean (Phaseolus vulgaris L.)

    NARCIS (Netherlands)

    Jayasinghe, W.U.

    1982-01-01

    For the past years there have been outbreaks of a disease of bean ( Phaseolus vulgaris L.) in Colombia called bean chlorotic mottle. The etiology of bean chlorotic mottle was not known, but the disease was generally believed to be incited by the same whitefly-transmitted virus that causes variegatio

  4. High Latitude Mottling on Jupiter

    Science.gov (United States)

    2000-01-01

    The familiar banded appearance of Jupiter at low and middle latitudes gradually gives way to a more mottled appearance at high latitudes in this striking true color image taken Dec. 13, 2000, by NASA's Cassini spacecraft.The intricate structures seen in the polar region are clouds of different chemical composition, height and thickness. Clouds are organized by winds, and the mottled appearance in the polar regions suggests more vortex-type motion and winds of less vigor at higher latitudes.The cause of this difference is not understood. One possible contributor is that the horizontal component of the Coriolis force, which arises from the planet's rotation and is responsible for curving the trajectories of ocean currents and winds on Earth, has its greatest effect at high latitudes and vanishes at the equator. This tends to create small, intense vortices at high latitudes on Jupiter. Another possibility may lie in that fact that Jupiter overall emits nearly as much of its own heat as it absorbs from the Sun, and this internal heat flux is very likely greater at the poles. This condition could lead to enhanced convection at the poles and more vortex-type structures. Further analysis of Cassini images, including analysis of sequences taken over a span of time, should help us understand the cause of equator-to-pole differences in cloud organization and evolution.By the time this picture was taken, Cassini had reached close enough to Jupiter to allow the spacecraft to return images with more detail than what's possible with the planetary camera on NASA's Earth-orbiting Hubble Space Telescope. The resolution here is 114 kilometers (71 miles) per pixel. This contrast-enhanced, edge-sharpened frame was composited from images take at different wavelengths with Cassini's narrow-angle camera, from a distance of 19 million kilometers (11.8 million miles). The spacecraft was in almost a direct line between the Sun and Jupiter, so the solar illumination on Jupiter is almost full

  5. Complete genome sequence of arracacha mottle virus.

    Science.gov (United States)

    Orílio, Anelise F; Lucinda, Natalia; Dusi, André N; Nagata, Tatsuya; Inoue-Nagata, Alice K

    2013-01-01

    Arracacha mottle virus (AMoV) is the only potyvirus reported to infect arracacha (Arracacia xanthorrhiza) in Brazil. Here, the complete genome sequence of an isolate of AMoV was determined to be 9,630 nucleotides in length, excluding the 3' poly-A tail, and encoding a polyprotein of 3,135 amino acids and a putative P3N-PIPO protein. Its genomic organization is typical of a member of the genus Potyvirus, containing all conserved motifs. Its full genome sequence shared 56.2 % nucleotide identity with sunflower chlorotic mottle virus and verbena virus Y, the most closely related viruses.

  6. Succinic acid production from Jerusalem artichoke

    DEFF Research Database (Denmark)

    Gunnarsson, Ingólfur Bragi; Karakashev, Dimitar Borisov; Angelidaki, Irini

    In this work, A. succinogenes 130Z was used to produce succinic acid from Jerusalem artichoke tuber hydrolysate. Results showed that both fructose and glucose in the tuber hydrolysate were utilized for succinic acid production. The sugar utilization was found to be dependent on process control......, hence, when pH was fixed at 6.8 the sugar utilization of fructose was increased from 68.6% to 96.5% and the succinic acid production was also increased by 26.4% to yield 26.8 g/L succinic acid. In this study a one-step pretreatment/hydrolysis method was used where no enzymes were used. Our work suggests...... that Jerusalem artichoke tubers could be utilized for production of bio-succinic acid....

  7. New cropping designs for globe artichoke industry

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    Rosario Paolo Mauro

    2011-03-01

    Full Text Available A two-year experiment was carried-out in order to evaluate the effects of two plant arrangements (single vs. twin rows and four plant densities (1.0 -1.2 -1.4 and 1.8 plant m–2 on the agronomical behaviour and head characteristics of three globe artichoke genotypes (Violetto di Sicilia, Harmony F1 and Madrigal F1. The change of the cultivation format toward a high density stand significantly increase yield and yield synchronicity. The twin rows plant arrangement, although reduced total yield, increased the yield synchronicity. Moreover, the cultivation of seed-propagated genotypes (Harmony F1 and Madrigal F1 allowed extending significantly the availability of the heads across the year. On the basis of our results, we can assert that the implementation of a specific scheduling cultivation, based on higher density stands, twin rows plant arrangement and the integration of the traditional early genotypes with the new seed-propagated cultivars, is a promising way to match the requirements of a globe artichoke industrial crop, and to predispose a better mechanization of the cultural practices.

  8. Structured heterogeneity in a marine terrace chronosequence: Upland mottling

    Science.gov (United States)

    Schulz, Marjorie S.; Stonestrom, David A.; Lawrence, Corey R.; Bullen, Thomas D.; Fitzpatrick, John; Kyker-Snowman, Emily; Manning, Jane; Mnich, Meagan

    2016-01-01

    Soil mottles generally are interpreted as a product of reducing conditions during periods of water saturation. The upland soils of the Santa Cruz, CA, marine terrace chronosequence display an evolving sequence of reticulate mottling from the youngest soil (65 ka) without mottles to the oldest soil (225 ka) with well-developed mottles. The mottles consist of an interconnected network of clay and C-enriched regions (gray, 2.5Y 6/1) bordered by leached parent material (white, 2.5Y 8/1) within a diminishing matrix of oxidized parent material (orange, 7.5YR 5/8). The mottles develop in soils that formed from relatively uniform nearshore sediments and occur below the depth of soil bioturbation. To explore how a presumably wetland feature occurs in an unsaturated upland soil, physical and chemical characteristics of mottle separates (orange, gray, and white) were compared through the deep time represented by the soil chronosequence. Mineralogical, isotopic, and surface-area differences among mottle separates indicate that rhizogenic centimeter-scale mass transfer acting across millennia is an integral part of weathering, pedogenesis, and C and nutrient transfer. Elemental analysis, electron microscopy, and Fe-isotope systematics indicate that mottle development is driven by deep roots together with their fungal and microbial symbionts. Taken together, these data suggest that deep soil horizons on old stable landforms can develop reticulate mottling as the long-term imprint of rhizospheric processes. The processes of rhizogenic mottle formation appear to regulate pedogenesis, nutrients, and C sequestration at depth in unsaturated zones.

  9. Selective depletion of organic matter in mottled podzol horizons

    NARCIS (Netherlands)

    Buurman, P.; Schellekens, J.; Fritze, H.; Nierop, K.G.J.

    2007-01-01

    Abstract: Some well-drained podzols on quartz sands in the Netherlands and neighbouring Belgium and Germany show mottling in all horizons due to selective removal of organic matter. Phospholipid analysis and morphology of the mottles suggests that this removal is due to activity of fungi. Investigat

  10. Optimization of pectin extraction and antioxidant activities from Jerusalem artichoke

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    Liu, Shengyi; Shi, Xuejie; Xu, Lanlan; Yi, Yuetao

    2016-03-01

    Jerusalem artichoke is an economic crop widely planted in saline-alkaline soil. The use of Jerusalem artichoke is of great significance. In this study, the response surface method was employed to optimize the effects of processing variables (extraction temperature, pH, extraction time, and liquid-to-solid ratio) on the yield of Jerusalem artichoke pectin. Under the optimal extraction conditions: pH 1.52, 63.62 min, 100°C and a liquid-to-solid ratio of 44.4 mL/g, the maximum pectin yield was predicted to be 18.76%. Experiments were conducted under these optimal conditions and a pectin yield of 18.52±0.90% was obtained, which validated the model prediction. The effects of diff erent drying methods (freeze drying, spray drying and vacuum drying) on the properties of Jerusalem artichoke pectin were evaluated and they were compared with apple pectin. FTIR spectral analysis showed no major structural diff erences in Jerusalem artichoke pectin samples produced by various drying treatments. The antioxidant activities of pectin dried by diff erent methods were investigated using in vitro hydroxyl and DPPH radical scavenging systems. The results revealed that the activities of spray dried pectin (SDP) and apple pectin (AP) were stronger than those of vacuum oven dried pectin (ODP) and vacuum freeze dried pectin (FDP). Therefore compared with the other two drying methods, the spray drying method was the best.

  11. Insect Vectors of Rice Yellow Mottle Virus

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    Augustin Koudamiloro

    2015-01-01

    Full Text Available Rice yellow mottle virus (RYMV is the major viral constraint to rice production in Africa. RYMV was first identified in 1966 in Kenya and then later in most African countries where rice is grown. Several studies have been conducted so far on its evolution, pathogenicity, resistance genes, and especially its dissemination by insects. Many of these studies showed that, among RYMV vectors, insects especially leaf-feeders found in rice fields are the major source of virus transmission. Many studies have shown that the virus is vectored by several insect species in a process of a first ingestion of leaf material and subsequent transmission in following feedings. About forty insect species were identified as vectors of RYMV since 1970 up to now. They were essentially the beetles, grasshoppers, and the leafhoppers. For this review, we presented the chronology of their identification. Also, the biology, ecology, host range, distribution, and caused damage of these insects were briefly summarized.

  12. Complete nucleotide sequence of a virus associated with rusty mottle disease of sweet cherry (Prunus avium).

    Science.gov (United States)

    Villamor, D V; Druffel, K L; Eastwell, K C

    2013-08-01

    Cherry rusty mottle is a disease of sweet cherries first described in 1940 in western North America. Because of the graft-transmissible nature of the disease, a viral nature of the disease was assumed. Here, the complete genomic nucleotide sequences of virus isolates from two trees expressing cherry rusty mottle disease symptoms are characterized; the virus is designated cherry rusty mottle associated virus (CRMaV). The biological and molecular characteristics of this virus in comparison to those of cherry necrotic rusty mottle virus (CNRMV) and cherry green ring mottle virus (CGRMV) are described. CRMaV was subsequently detected in additional sweet cherry trees expressing symptoms of cherry rusty mottle disease.

  13. New Polylactic Acid Composites Reinforced with Artichoke Fibers

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    Luigi Botta

    2015-11-01

    Full Text Available In this work, artichoke fibers were used for the first time to prepare poly(lactic acid (PLA-based biocomposites. In particular, two PLA/artichoke composites with the same fiber loading (10% w/w were prepared by the film-stacking method: the first one (UNID reinforced with unidirectional long artichoke fibers, the second one (RANDOM reinforced by randomly-oriented long artichoke fibers. Both composites were mechanically characterized in tensile mode by quasi-static and dynamic mechanical tests. The morphology of the fracture surfaces was analyzed through scanning electron microscopy (SEM. Moreover, a theoretical model, i.e., Hill’s method, was used to fit the experimental Young’s modulus of the biocomposites. The quasi-static tensile tests revealed that the modulus of UNID composites is significantly higher than that of the neat PLA (i.e., ~40%. Moreover, the tensile strength is slightly higher than that of the neat matrix. The other way around, the stiffness of RANDOM composites is not significantly improved, and the tensile strength decreases in comparison to the neat PLA.

  14. Molecular properties and prebiotic effect of inulin obtained from artichoke (Cynara scolymus L.).

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    López-Molina, Dorotea; Navarro-Martínez, María Dolores; Rojas Melgarejo, Francisco; Hiner, Alexander N P; Chazarra, Soledad; Rodríguez-López, José Neptuno

    2005-06-01

    A high molecular weight inulin has been prepared from artichoke (Cynara scolymus L.) agroindustrial wastes using environmentally benign aqueous extraction procedures. Physico-chemical analysis of the properties of artichoke inulin was carried out. Its average degree of polymerization was 46, which is higher than for Jerusalem artichoke, chicory, and dahlia inulins. GC-MS confirmed that the main constituent monosaccharide in artichoke inulin was fructose and its degradation by inulinase indicated that it contained the expected beta-2,1-fructan bonds. The FT-IR spectrum was identical to that of chicory inulin. These data indicate that artichoke inulin will be suitable for use in a wide range of food applications. The health-promoting prebiotic effects of artichoke inulin were demonstrated in an extensive microbiological study showing a long lasting bifidogenic effect on Bifidobacterium bifidum ATCC 29521 cultures and also in mixed cultures of colonic bacteria.

  15. Efficient Agrobacterium-based transient expression system for the production of biopharmaceuticals in plants

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    Circelli, Patrizia; Donini, Marcello; Villani, Maria Elena; Benvenuto, Eugenio

    2010-01-01

    We have recently described an efficient transient expression system mediated by Agrobacterium tumefaciens for the production of HIV-1 Nef protein in Nicotiana benthamiana plants. In order to enhance the yield of recombinant protein we assayed the effect of three gene-silencing viral suppressor proteins (P25 of Potato Virus X, P19 of Artichoke Mottled Crinckle virus and Tomato Bushy Stunt virus) on Nef expression levels. Results demonstrated that AMCV-P19 gave the highest Nef yield (1.3% of total soluble protein) and that this effect was correlated to a remarkable decrease of Nef-specific small interfering RNAs (siRNAs) indicating an effective modulation of RNA silencing mechanisms. Here we report additional data on the production of different heterologous proteins including human immunoglobulin heavy and light chains and a virus coat protein that demonstrate the robustness of this co-agroinfiltration expression system boosted by the AMCV-P19 gene-silencing suppressor. PMID:21326930

  16. Temporal evolution of mottles observed in H_alpha

    CERN Document Server

    Bostanci, Z F; Erdogan, Nurol Al

    2007-01-01

    In April 2002, H_alpha observations of the solar chromosphere with high spatial and spectral resolution were obtained with the Gottingen Fabry-Perot Spectrometer mounted in the Vacuum Tower Telescope (VTT) at the Observatorio del Teide/Tenerife. In this work, we analyze a short time sequence of a quiet region with chains of mottles. Some physical parameters of dark mottles are determined by using Beckers' cloud model which takes the source function, the Doppler width, and the velocity to be constant within the cloud along the line of sight. Here, we present the results of our study.

  17. Fuel ethanol production from Jerusalem artichoke stalks using different yeasts

    Energy Technology Data Exchange (ETDEWEB)

    Margaritis, A.; Bajpai, P.; Bajpai, P.K.

    1983-01-01

    The inulin-type sugars present in the stalks of Jerusalem artichoke (Helianthus tuberosus) were extracted with hot water and were used as a substrate to produce fuel EtOH. Seven different yeasts were used to obtain batch kinetic data. The medium consisted of stalk extract from Jerusalem artichoke containing 7.3% total sugars, supplemented with 0.01% oleic acid, 0.01% corn steep liquor, and 0.05% Tween 80. All batch fermentations were carried out in a 1-L bioreactor at 35 degrees and pH 4.6, and the following parameters were measured as a function of time: total sugars, EtOH and biomass concentration, maximum specific growth rate, and biomass and EtOH yields. The best EtOH producer was Kluyveromyces marxianus UCD (FST) 55-82 which gave an EtOH-to-sugar yield 97% of the theoretical maximum value, with almost 100% sugar utilization.

  18. The Possible Efficacy of Artichoke in Fluconazole Related Hepatotoxicity

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    Hüseyin Kurt

    2014-01-01

    Full Text Available Although fluconazole related hepatotoxicity (FRH is rare, mortal acute hepatic necrosis and jaundice were reported in immunocompromised states such as acquired immunodeficiency syndrome (AIDS and bone marrow transplant (BMT. We present a case of a patient with multiple sclerosis who developed hepatotoxicity with the use of a single 150 mg fluconazole tablet for fungal vaginitis, 10 days after methylprednisolone pulse treatment. Our patient’s alanine aminotransferase (ALT and aspartate aminotransferase (AST levels were decreased, 1200 U/L and 800 U/L, respectively, and bilirubin levels were consistent at 37 mg/dL. Artichoke which has anticholestatic and antioxidant properties was used by our patient. She consumed a 30 mg artichoke leaf extract tea 3 times a day. The bilirubin levels significantly declined at the end of the first week and all liver function tests were normalized within 2 months.

  19. Influence of planting date and temperature on inulin content in Jerusalem Artichoke (Helianthus tuberosus L.)

    Science.gov (United States)

    Lower temperatures during the dry season in tropical regions might affect inulin content and inulin yield of Jerusalem artichoke. The objective of this study was to determine the effect of planting dates during low temperature on inulin yield and content of Jerusalem artichoke. Two pot experiments...

  20. Spectroscopy on the assembly of cowpea chlorotic mottle virus

    NARCIS (Netherlands)

    Kruese, J.

    1979-01-01

    This thesis describes the characterization of cowpea chlorotic mottle virus (CCMV) by using spectroscopic techniques. In chapter one and two the main properties of CCMV, which belongs to the bromoviruses, are summarized. The application of spectroscopic techniques in the study of other viruses is re

  1. Artichoke (Cynara scolymus L. as cash-cover crop in an organic vegetable system

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    Anna LENZI

    2015-11-01

    Full Text Available In organic vegetable systems green manure crops play an important role as a nitrogen source, but they cover the soil for several months without producing a direct income. Globe artichoke (Cynara scolymus L. provides both heads to be harvested and particularly abundant plant residues to be possibly incorporated into the soil, so it may play a double role of cash and cover crop. This paper describes an on-farm study in which seed-propagated artichoke, cultivated as an annual crop, preceded zucchini squash and lettuce cultivated in sequence within a vegetable organic system. Artichoke produced about 7 t ha-1 of saleable heads and left, after harvest, 50.3 t ha-1 of fresh biomass usable as green manure. Zucchini squash and lettuce following artichoke showed a significant increase in yield when artichoke residues were incorporated into the soil. Furthermore, a residual positive effect of green manure on soil fertility was detected after lettuce harvest. 

  2. Productivity and fermentability of Jerusalem artichoke according to harvesting date

    Energy Technology Data Exchange (ETDEWEB)

    Chabbert, N.; Arnoux, M.; Braun, Ph.; Galzy, P.; Guiraud, J.P.

    1983-01-01

    The amount of alcohol obtained per hectare of Jerusalem artichoke culture depends on the yield of tubers, the sugar content of the tubers and the fermentability of these sugars. Under Mediterranean climate conditions, the cultivar 'Violet commun' attained its maximum tuber production by 15 November, when the stems and leaves dried up, and then remained constant through the winter. The sugar content of the tubers varied little during this period. However, the sugar composition did vary with time: the polyfructosans were depolymerized. The fermentability of sugars without prior chemical hydrolysis was quite good with Kluyveromyces marxianus which showed high inulinase activity in contrast to Saccharomyces cerevisiae.

  3. Productivity and fermentability of Jerusalem artichoke according to harvesting date

    Energy Technology Data Exchange (ETDEWEB)

    Chabbert, M.; Braunt, Ph.; Guiraud, J.P.; Arnoux, M.; Galzy, P.

    1983-01-01

    The amount of alcohol obtained per hectare of Jerusalem artichoke culture depends on the yield of tubers, the sugar content of the tubers and the fermentability of these sugars. Under Mediterranean climate conditions, the cultivar 'Violet commun' attained its maximum tuber production by 15 November, when the stems and leaves dried up, and then remained constant through the winter. The sugar content of the tubers varied little during this period. However, the sugar composition did vary with time: the polyfructosans were depolymerized. The fermentability of sugars without prior chemical hydrolysis was quite good with Kluyveromyces marxianus which showed high inulinase activity in contrast to Saccharomyces cerevisiae. (Refs. 13).

  4. Productivity and fermentability of Jerusalem artichoke according to harvesting date

    Energy Technology Data Exchange (ETDEWEB)

    Chabbert, N.; Braun, P.; Guiraud, J.P.; Arnoux, M.; Galzy, P.

    1983-01-01

    The amount of alcohol obtained per hectare of Jerusalem artichoke culture depends on the yield of tubers, the sugar content of the tubers and the fermentability of these sugars. Under Mediterranean climate conditions, the cultivar Violet commun attained its maximum tuber production by 15 November, when the stems and leaves dried up, and then remained constant through the winter. The sugar content of the tubers varied little during this period. However, the sugar composition did vary with time: the polyfructosans were depolymerized. The fermentability of sugars without prior chemical hydrolysis was quite good with Kluyveromyces marxianus which showed high inulinase activity in contrast to Saccaromyces cerevisiae. 5 figures, 1 table.

  5. RESPONSE SURFACE METHODOLOGY ANALYSIS OF POLYPHENOL RECOVERY FROM ARTICHOKE WASTE

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    Antonio Zuorro

    2014-01-01

    Full Text Available Large amounts of a solid waste consisting mainly of outer bracts and stems are produced from the industrial processing of artichokes. In this study, the recovery of polyphenols from the two waste components was investigated. Extraction experiments were carried outby an environmentally friendly procedure using aqueous ethanol as solvent. The total polyphenol content, expressed as mg of GAE per g of dry weight, was 10.23±0.68 mg/g for bracts and 16.36±0.85 mg/g for stems. To evaluate the effect of Temperature (T, Extraction time (E and liquid-to-solid Ratio (R on the extraction yields, a central composite design coupled with response surface methodology was used. Under the best conditions (T = 50°C, E = 110.4 min and R = 20 mL g-1, extraction yields between 90 and 93% were obtained. Statistical analysis of the data showed that E was the most influential factor, followed by T and R. Simplified polynomial models were developed to describe the effect of individual factors and their interactions on the extraction yield of polyphenols. Overall, the results of this study support the potential of using artichoke waste as a source of natural phenolic antioxidants and give useful directions on how to improve recovery by proper selection of extraction conditions.

  6. Micropropagation of globe artichoke (Cynara cardunculus L. var. scolymus).

    Science.gov (United States)

    Iapichino, Giovanni

    2013-01-01

    The globe artichoke (Cynara cardunculus L. var. scolymus) is a perennial plant cultivated in the Mediterranean region and the Americas for its edible young flower heads. Although vegetative propagation by offshoots or by "ovoli" (underground dormant axillary buds) has been the primary method of propagation, the potential for the diffusion of diseases and the phenotypic variability can be very high. The propagation of this species by axillary shoot proliferation from in vitro-cultured meristems produces systemic pathogen-free plants and a higher multiplication rate as compared to that obtained by conventional agamic multiplication. Axillary shoot proliferation can be induced from excised shoot apices cultured on Murashige and Skoog agar solidified medium supplemented with various concentrations of cytokinins and auxins, depending on genotype. For the production of virus-free plants, meristems, 0.3-0.8 mm long are excised from shoot apices and surface sterilized. The transfer of artichoke microshoots to a medium lacking cytokinins or with low cytokinin concentration is critical for rooting. Adventitious roots develop within 3-5 weeks after transfer to root induction MS medium containing NAA or IAA at various concentrations. However, in vitro rooting frequency rate is dependent on the genotype and the protocol used. Acclimatization of in vitro microshoots having 3-4 roots is successfully accomplished; plantlets develop new roots in ex vitro conditions and continue to grow.

  7. Artichoke (Cynara scolymus L.) byproducts as a potential source of health-promoting antioxidant phenolics.

    Science.gov (United States)

    Llorach, Rafael; Espín, Juan Carlos; Tomás-Barberán, Francisco A; Ferreres, Federico

    2002-06-05

    The present study reports a fast, economical, and feasible way to extract antioxidant phenolics from artichoke byproducts: raw artichoke (RA), blanched (thermally treated) artichoke (BA), and artichoke blanching waters (ABW). These byproducts represent a huge amount of discarded material in some industries. Two protocols, with possible industrial applicability, based on both methanol and water extractions were used. Phenolic contents (expressed as caffeic acid derivatives) (grams per 100 g of dry extract) were 15.4 and 9.9 for RA when extracted with methanol and water, respectively; 24.3 and 10.3 for BA when extracted with methanol and water, respectively; and finally, 11.3 g of phenolics/100 mL of ABW. Therefore, methanol extracts yielded more phenolics than water extracts, especially when BA byproducts were used. The higher amount of phenolics in BA could be due to the inactivation of polyphenol oxidase (PPO) at the industrial scale (due to blanching process), avoiding PPO-catalyzed oxidation of these phenolics, a phenomenon that could occur in RA byproducts. Artichoke extracts from industrial byproducts showed a high free radical scavenging activity (versus both DPPH* and ABTS*+ radicals) as well as capacity to inhibit lipid peroxidation (ferric thiocyanate method). According to these results, the use of artichoke extracts from industrial byproducts as possible ingredients to functionalize foodstuffs (to decrease lipid peroxidation and to increase health-promoting properties) is suggested.

  8. The isolation and mapping of a novel hydroxycinnamoyltransferase in the globe artichoke chlorogenic acid pathway

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    Bourgaud Frédéric

    2009-03-01

    Full Text Available Abstract Background The leaves of globe artichoke and cultivated cardoon (Cynara cardunculus L. have significant pharmaceutical properties, which mainly result from their high content of polyphenolic compounds such as monocaffeoylquinic and dicaffeoylquinic acid (DCQ, and a range of flavonoid compounds. Results Hydroxycinnamoyl-CoA:quinate hydroxycinnamoyltransferase (HQT encoding genes have been isolated from both globe artichoke and cultivated cardoon (GenBank accessions DQ915589 and DQ915590, respectively using CODEHOP and PCR-RACE. A phylogenetic analysis revealed that their sequences belong to one of the major acyltransferase groups (anthranilate N-hydroxycinnamoyl/benzoyltransferase. The heterologous expression of globe artichoke HQT in E. coli showed that this enzyme can catalyze the esterification of quinic acid with caffeoyl-CoA or p-coumaroyl-CoA to generate, respectively, chlorogenic acid (CGA and p-coumaroyl quinate. Real time PCR experiments demonstrated an increase in the expression level of HQT in UV-C treated leaves, and established a correlation between the synthesis of phenolic acids and protection against damage due to abiotic stress. The HQT gene, together with a gene encoding hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase (HCT previously isolated from globe artichoke, have been incorporated within the developing globe artichoke linkage maps. Conclusion A novel acyltransferase involved in the biosynthesis of CGA in globe artichoke has been isolated, characterized and mapped. This is a good basis for our effort to understand the genetic basis of phenylpropanoid (PP biosynthesis in C. cardunculus.

  9. Characterization and ecological aspects of rice yellow mottle virus in Kenya

    NARCIS (Netherlands)

    Bakker, W.

    1974-01-01

    Rice yellow mottle virus(RYMV)is the causal pathogen of yellow mottle of rice in the area around Kisumu near Lake Victoria in Kenya. Affected plants show a yellow or orange discolouration of the leaves, reduced tillering and stunting of the plants, and sterility of the flowers. The results

  10. First Report of Carnation vein mottle virus Infecting Dianthus amurensis in China

    Science.gov (United States)

    Tomato mottle mosaic virus (ToMMV), a tentative member in genus Tobamovirus, was first reported from a greenhouse tomato sample collected in Mexico in 2013 (1). In August 2013, foliar mottle, shrinking and necrosis were observed on pepper plants in several vegetable greenhouses of Lhasa, Tibet Auton...

  11. Prevalence of dental mottling in school-aged lifetime residents of 16 Texas communities.

    Science.gov (United States)

    Butler, W J; Segreto, V; Collins, E

    1985-01-01

    The severity of dental mottling in 2,592 school-aged, lifetime residents of 16 Texas communities was investigated in 1980-81 to identify factors associated with mottling and to construct a prediction model for the prevalence of mottling. The communities were selected to obtain a wide range of levels of fluoride in the drinking water. The children within each of the communities were contacted through their schools and received a dental examination to assess the severity of mottling. Information on demographic, dental health practice, and other candidate predictor variables was obtained from a questionnaire completed by a parent. A number of water quality measurements were also recorded for each community. White and Spanish-surname children had about the same prevalence of mottling while Blacks had a higher prevalence, odds ratio (OR) = 2.3, 95% confidence interval = 1.4, 3.7. Children from homes which had air conditioning had a lower prevalence of mottling (OR = .6, (0.4, 0.8)). The use of fluoride toothpaste or drops and the number of fluoride treatments were almost identical among those who did and did not develop moderate mottling. In addition to fluoride, total dissolved solids and zinc were water quality variables associated with mottling. PMID:4061713

  12. Quantitative assessment of factors contributing to mottling of colored tablets II: formulation variables.

    Science.gov (United States)

    Armstrong, N A; March, G A

    1976-02-01

    The effects of several formulation variables were quantified with respect to factors affecting tablet mottling. Tablet mottling occurred with several commonly used binders and could not be prevented by using highly viscous binding solutions. However, mottling was reduced initially by increasing granule strength. Tablet diluents and dye-adsorbent materials had a profound effect on mottling, not by preventing dye migration but by affecting granule fragmentation on compression and the extent to which the dye-deficient material at the center of the granule was revealed. The lake form of FD&C Blue No. 1 was found to bleed in the presence of diluents that raised the pH of the granulating fluid above 6.4. Anionic impurities in the diluents also caused leaching of free dye and, consequently, increased tablet mottling. The conclusions from this study and previous papers were drawn together to give general principles for the production of uniformly colored tablets by aqueous granulation techniques.

  13. Influence of the surface roughness of coated and uncoated papers on the digital print mottle

    Directory of Open Access Journals (Sweden)

    Ivana Jurič

    2014-07-01

    Full Text Available Many factors influence the occurrence of print mottle in prints. In printing process three main components are involved: printing press, substrate and toner. They can be considered as separate components, but in most cases their interaction influences the quality of the print. The goal of this work was to examine the influence of surface roughness of different types of paper (coated and uncoated on print mottle of electrophotographic digital prints. We set up a hypothesis that print mottle will be more apparent on rougher surfaces. In the experimental part we printed four different substrates with different surface properties on electrophotographic printing press. Morphology of the papers surface was analysed using atomic force microscopy (AFM from which surface properties were calculated. For print mottle characterization Gray level co-occurrence matrix (GLCM method was used. Based on the measurements and results we can conclude, contrary to the initial hypothesis, that uncoated papers with rougher surfaces produce smaller print mottle values.

  14. Mottled mice and non-mammalian models of Menkes disease

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    malgorzata elenartowicz

    2015-12-01

    Full Text Available Menkes disease is a multi-systemic copper metabolism disorder caused by mutations in the X-linked ATP7A gene and characterised by progressive neurodegeneration and severe connective tissue defects. The ATP7A protein is a Copper (Cu-transporting ATPase expressed in all tissues and plays a critical role in the maintenance of copper homeostasis in cells of the whole body. ATP7A participates in copper absorption in the small intestine and in copper transport to the CNS across the blood-brain-barrier and blood–cerebrospinal fluid- barrier. Cu is essential for synaptogenesis and axonal development. In cells, ATP7A participates in the incorporation of copper into Cu-dependent enzymes during the course of its maturation in the secretory pathway. There is a high degree of homology (>80% between the human ATP7A and murine Atp7a genes. Mice with mutations in the Atp7a gene, called mottled mutants, are well-established and excellent models of Menkes disease. Mottled mutants closely recapitulate the Menkes phenotype and are invaluable for studying Cu-metabolism. They provide useful models for exploring and testing new forms of therapy in Menkes disease. Recently, non-mammalian models of Menkes disease, Drosophila melanogaster and Danio rerio mutants were used in experiments which would be technically difficult to carry out in mammals.

  15. Mottled Mice and Non-Mammalian Models of Menkes Disease.

    Science.gov (United States)

    Lenartowicz, Małgorzata; Krzeptowski, Wojciech; Lipiński, Paweł; Grzmil, Paweł; Starzyński, Rafał; Pierzchała, Olga; Møller, Lisbeth Birk

    2015-01-01

    Menkes disease is a multi-systemic copper metabolism disorder caused by mutations in the X-linked ATP7A gene and characterized by progressive neurodegeneration and severe connective tissue defects. The ATP7A protein is a copper (Cu)-transporting ATPase expressed in all tissues and plays a critical role in the maintenance of copper homeostasis in cells of the whole body. ATP7A participates in copper absorption in the small intestine and in copper transport to the central nervous system (CNS) across the blood-brain-barrier (BBB) and blood-cerebrospinal fluid barrier (BCSFB). Cu is essential for synaptogenesis and axonal development. In cells, ATP7A participates in the incorporation of copper into Cu-dependent enzymes during the course of its maturation in the secretory pathway. There is a high degree of homology (>80%) between the human ATP7A and murine Atp7a genes. Mice with mutations in the Atp7a gene, called mottled mutants, are well-established and excellent models of Menkes disease. Mottled mutants closely recapitulate the Menkes phenotype and are invaluable for studying Cu-metabolism. They provide useful models for exploring and testing new forms of therapy in Menkes disease. Recently, non-mammalian models of Menkes disease, Drosophila melanogaster and Danio rerio mutants were used in experiments which would be technically difficult to carry out in mammals.

  16. In vitro antioxidant activities of edible artichoke (Cynara scolymus L.) and effect on biomarkers of antioxidants in rats

    DEFF Research Database (Denmark)

    Jimenez-Escrig, A.; Dragsted, Lars Ove; Daneshvar, Bahram;

    2003-01-01

    Artichoke (Cynara scolymus L.), an edible vegetable from the Mediterranean area, is a good source of natural antioxidants such as vitamin C, hydroxycinnamic acids, and flavones. The antioxidant activity of aqueous-organic extracts of artichoke were determined using three methods: (a) free radical 2......,2-diphenyl-1-picrylhydrazyl (DPPH.) scavenging, (b) ferric-reducing antioxidant power (FRAP), and...

  17. Kombucha fermentation on raw extracts of different cultivars of Jerusalem artichoke

    Directory of Open Access Journals (Sweden)

    Lončar Eva S.

    2007-01-01

    Full Text Available Kombucha is a symbiosis between yeasts and acetic bacteria. It usually grows on sweetened black tea, but cultivation is possible on many other substrates. Jerusalem artichoke tubers extract is one of them. Tubers are suitable for the dietetic nutrition because of the low monosaccharide content and presence of some polyfructan ingredients which act as prebiotic. Five different cultivars of Jerusalem artichoke were used for the preparation of substrates for kombucha fermentation. The aim of this paper was the investigation of the influence of different Jerusalem artichoke cultivars on metabolic activity of kombucha. Composition of carbohydrates was followed using thin-layer chromatography and pH, reducing sugars content and yield of biomass were measured. Most of the samples with Jerusalem artichoke tubers extract contained fructose, probably small amount of glucose, fructo-oligosaccharides with different degree of polymerization and, inulin. Considering TLC chromatograms, Jerusalem artichoke cultivar did not affect significantly the composition of oligosaccharides in the fermentative liquid, as only minor differences were observed.

  18. Inheritance of tolerance to Cowpea Mild Mottle Virus in soybean

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    Carlos A Arrabal Arias

    2015-08-01

    Full Text Available Soybean stem necrosis is caused by Cowpea mild mottle virus (CPMMV and it has been recognized as an emerging and economically important disease in Brazil. No resistant, but only tolerant cultivars have been identified so far, and their genetic control is still unknown. To investigate the inheritance of soybean tolerance to CPMMV, two crosses between tolerant cultivars (BRS 133 x BRSMT Pintado, and between a susceptible (CD 206 and a tolerant cultivar (BRSMT Pintado were carried out to obtain F2 and F2:3 generations. Quantitative and qualitative analyses applied to the data from greenhouse evaluations showed that there are at least two distinct major genes determining tolerance to CPMMV, one in the soybean cultivar BRS 133 and another in the cultivar BRSMT Pintado, with predominance of additive genetic effects and heritability levels that allow for efficient selection based on early generation means

  19. Mud volcano origin of the Mottled Zone, South Levant

    Directory of Open Access Journals (Sweden)

    Igor Novikov

    2013-09-01

    Full Text Available The Mottled Zone (MZ or Hatrurim Formation, which occurs near the Levantine Transform in the South Levant, has been studied during the last 150 years but its origin remains debatable. Mottled Zone Complex/Complexes (MZC/MZCs consist of brecciated carbonate and low-temperature calcium-hydrosilicate rocks, which include unusual high- and ultra-high-temperature low-pressure (HT-LP metamorphic mineral assemblages. The MZ has been regarded as a product of combustion of bituminous chalks of the Ghareb Fm. of Cretaceous (Maastrichtian age. In this paper we present detailed geographic, geomorphologic, structural and geological data from the MZCs of the South Levant, which show that the MZCs cannot be stratigraphically correlated with the Ghareb Fm., because MZC late Oligocene–late Pleistocene deposits occur within or unconformably, i.e., with stratigraphic hiatus, overlap both the late Cretaceous and, in places, Neogene stratigraphic units. We propose an alternative model for the formation of MZCs by tectonically induced mud volcanism during late Oligocene–late Pleistocene time. This model explains (i the presence of dikes and tube-like bodies, which consist of brecciated exotic clastic material derived from stratigraphically and hypsometrically lower horizons; (ii mineral assemblages of sanidinite facies metamorphism; (iii multi-stage character of HT-LP pyrometamorphism; and (iv multi-stage low-temperature hydrothermal alteration. High temperatures (up to 1500 °C mineral assemblages resulted from combustion of hydrocarbon gases of mud volcanoes. Mud volcanism was spatially and structurally related to neotectonic folds and deformation zones formed in response to opening of the Red Sea rift and propagation of the Levantine Transform Fault. Our model may significantly change the prospects for oil-and-gas deposits in the region.

  20. Synbiotic functional drink from Jerusalem artichoke juice fermented by probiotic Lactobacillus plantarum PCS26

    OpenAIRE

    Dimitrovski, Darko; Velickova, Elena; Dimitrovska, Maja; Langerholc, Tomaz; Winkelhausen, Eleonora

    2015-01-01

    A probiotic strain Lactobacillus plantarum PCS26 was used to ferment Jerusalem artichoke juice. Growth kinetics of the bacterial strain was followed during juice fermentation both in flask and in laboratory fermentor. Jerusalem artichoke showed to be an excellent source of nutrients for L. plantarum PCS26 growth. The culture grew very well reaching more than 1010 cfu/ml in just 12 h. The pH changed from the initial 6.5 to 4.6 at the end of fermentation. The culture hydrolyzed fructooligosacch...

  1. Survival and recovery rates of mottled ducks banded in Texas and Louisiana

    Science.gov (United States)

    Haukos, David A.

    2015-01-01

    The Western Gulf Coast population of the mottled duck (Anas fulvigula) is dependent on the Gulf coastal marsh to complete its entire life cycle. Band recovery data can be used to monitor mottled duck populations by estimating annual survival, indexing harvest rate, and assessing movements. Band returns from hunting seasons 1997–2013 were used to evaluate factors influencing annual survival, recovery rates, and movements of mottled ducks in Texas and Louisiana. For banding years of 1997–2013, 58,349 normal, wild mottled ducks were banded and released in Texas and Louisiana. Since 2002, 86% of mottled duck bandings have occurred on the Chenier Plain of Texas and Louisiana. Hunters shot, recovered, and reported 7,061birds with bands during this period. Direct recovery rates were greater for juveniles than adults but changed little since the 1970s. Estimates of annual survival did not differ between Texas and Louisiana, but did among years and between sex and age classes. Adult male and juvenile female mottled ducks had the greatest and lowest annual survival rates, respectively. Recovery of birds banded on the Chenier Plain was four times greater for birds banded in Texas and harvested in Louisiana than banded in Louisiana and harvested in Texas. Much of the current inference of results from banding mottled ducks is limited to the Chenier Plain. To monitor the entire Western Gulf Coast population of mottled ducks, managers can consider expanding operational banding operations with annual quotas, which would improve survival and recovery estimates and allow for inference beyond the Chenier Plain region.

  2. Globe Artichoke Callus as an Alternative System for the Production of Dicaffeoylquinic Acids

    NARCIS (Netherlands)

    Moglia, A.; Menin, B.; Comino, C.; Lanteri, S.; Beekwilder, M.J.

    2012-01-01

    Globe artichoke leaves are highly rich in phenolic acids, in particular chlorogenic acid and dicaffeoylquinic acids. The latter are of particular interest since they can exert a stronger antioxidant activity, due to the presence of two adjacent hydroxyl groups on each of their phenolic rings. Plant

  3. CHANGE OF INULIN IN THE TUBERS OF JERUSALEM ARTICHOKE AT STORAGE

    Directory of Open Access Journals (Sweden)

    Nazarenko M. N.

    2013-12-01

    Full Text Available This article examines the change of the mass fraction of inulin in Jerusalem artichoke tubers during storage under different conditions. The influence of temperature, storage time and variety features on the content of inulin have been shown. The terms and conditions of storage of raw materials before processing have been set.

  4. Cadmium Accumulation and Translocation in Two Jerusalem Artichoke (Helianthus tuberosus L.) Cultivars

    Institute of Scientific and Technical Information of China (English)

    CHEN Liang; LONG Xiao-Hua; ZHANG Zhen-Hua; ZHENG Xiao-Tao; Z. RENGEL; LIU Zhao-Pu

    2011-01-01

    Jerusalem artichoke (Helianthus tuberosus L.) not just can be used for bioethanol production but may be potentially used in phytoremediation for the removal of heavy metal pollutants.Two Jerusalem artichoke cultivars,N2 and N5,were subjected to six cadmium (Cd) concentrations (0,5,25,50,100 and 200 mg L-1) to investigate Cd tolerance and accumulation.After 21 days of growth,the effects of Cd on growth,chlorophyll content,net photosynthetic rate,intercellular CO2 concentration and malondialdehyde content were evaluated.Most growth parameters were reduced under Cd stress.The two Jerusalem artichoke cultivars had relatively high Cd tolerance and accumulation capacity (> 100 mg kg-1),with N5 being more tolerant and having higher Cd accumulation than N2.Roots accumulated more Cd than stems and leaves.The bioconcentration factors (far higher than 1) and translocation factors (lower than 1) decreased with an increase in Cd applied.The results suggested that Jerusalem artichoke could be grown at relatively high Cd loads,and N5 could be an excellent candidate for phytoremediation of Cd-contaminated soils.

  5. Effective protein extraction protocol for proteomics studies of Jerusalem artichoke leaves.

    Science.gov (United States)

    Zhang, Meide; Shen, Shihua

    2013-07-01

    Protein extraction is a crucial step for proteomics studies. To establish an effective protein extraction protocol suitable for two-dimensional electrophoresis (2DE) analysis in Jerusalem artichoke (Helianthus tuberosus L.), three different protein extraction methods-trichloroacetic acid/acetone, Mg/NP-40, and phenol/ammonium acetate-were evaluated using Jerusalem artichoke leaves as source materials. Of the three methods, trichloroacetic acid/acetone yielded the best protein separation pattern and highest number of protein spots in 2DE analysis. Proteins highly abundant in leaves, such as Rubisco, are typically problematic during leaf 2DE analysis, however, and this disadvantage was evident using trichloroacetic acid/acetone. To reduce the influence of abundant proteins on the detection of low-abundance proteins, we optimized the trichloroacetic acid/acetone method by incorporating a PEG fractionation approach. After optimization, 363 additional (36.2%) protein spots were detected on the 2DE gel. Our results suggest that trichloroacetic acid/acetone method is a better protein extraction technique than Mg/NP-40 and phenol/ammonium acetate in Jerusalem artichoke leaf 2DE analysis, and that trichloroacetic acid/acetone method combined with PEG fractionation procedure is the most effective approach for leaf 2DE analysis of Jerusalem artichoke.

  6. Design and Simulation of Two Robotic Systems for Automatic Artichoke Harvesting

    Directory of Open Access Journals (Sweden)

    Domenico Longo

    2013-12-01

    Full Text Available The target of this research project was a feasibility study for the development of a robot for automatic or semi-automatic artichoke harvesting. During this project, different solutions for the mechanical parts of the machine, its control system and the harvesting tools were investigated. Moreover, in cooperation with the department DISPA of University of Catania, different field structures with different kinds of artichoke cultivars were studied and tested. The results of this research could improve artichoke production for preserves industries. As a first step, an investigation on existing machines has been done. From this research, it has been shown that very few machines exist for this purpose. Based also on previous experiences, some proposals for different robotic systems have been done, while the mobile platform itself was developed within another research project. At the current stage, several different configurations of machines and harvesting end-effectors have been designed and simulated using a 3D CAD environment interfaced with Matlab®. Moreover, as support for one of the proposed machines, an artificial vision algorithm has been developed in order to locate the artichokes on the plant, with respect to the robot, using images taken with a standard webcam.

  7. In Vitro Callogenesis and Agrobacterium-Mediated Transformation of Globe Artichoke

    NARCIS (Netherlands)

    Menin, B.; Moglia, A.; Comino, C.; Lanteri, S.; Herpen, van T.W.J.M.; Beekwilder, M.J.

    2012-01-01

    Micropropagation techniques have been widely applied in globe artichoke (C. cardunculus L. var. scolymus), however, efficient protocols for the establishment of in vitro callogenesis and organogenesis, a pre-requisite for Agrobacterium-mediated genetic transformation, have not been set up so far. We

  8. Structural transitions in Cowpea chlorotic mottle virus (CCMV)

    Science.gov (United States)

    Liepold, Lars O.; Revis, Jennifer; Allen, Mark; Oltrogge, Luke; Young, Mark; Douglas, Trevor

    2005-12-01

    Viral capsids act as molecular containers for the encapsulation of genomic nucleic acid. These protein cages can also be used as constrained reaction vessels for packaging and entrapment of synthetic cargos. The icosahedral Cowpea chlorotic mottle virus (CCMV) is an excellent model for understanding the encapsulation and packaging of both genomic and synthetic materials. High-resolution structural information of the CCMV capsid has been invaluable for evaluating structure-function relationships in the assembled capsid but does not allow insight into the capsid dynamics. The dynamic nature of the CCMV capsid might play an important role in the biological function of the virus. The CCMV capsid undergoes a pH and metal ion dependent reversible structural transition where 60 separate pores in the capsid open or close, exposing the interior of the protein cage to the bulk medium. In addition, the highly basic N-terminal domain of the capsid, which is disordered in the crystal structure, plays a significant role in packaging the viral cargo. Interestingly, in limited proteolysis and mass spectrometry experiments the N-terminal domain is the first part of the subunit to be cleaved, confirming its dynamic nature. Based on our fundamental understanding of the capsid dynamics in CCMV, we have utilized these aspects to direct packaging of a range of synthetic materials including drugs and inorganic nanoparticles.

  9. Synbiotic functional drink from Jerusalem artichoke juice fermented by probiotic Lactobacillus plantarum PCS26.

    Science.gov (United States)

    Dimitrovski, Darko; Velickova, Elena; Dimitrovska, Maja; Langerholc, Tomaz; Winkelhausen, Eleonora

    2016-01-01

    A probiotic strain Lactobacillus plantarum PCS26 was used to ferment Jerusalem artichoke juice. Growth kinetics of the bacterial strain was followed during juice fermentation both in flask and in laboratory fermentor. Jerusalem artichoke showed to be an excellent source of nutrients for L. plantarum PCS26 growth. The culture grew very well reaching more than 10(10) cfu/ml in just 12 h. The pH changed from the initial 6.5 to 4.6 at the end of fermentation. The culture hydrolyzed fructooligosaccharides present in the Jerusalem artichoke juice, yielding fructose which was presumably consumed along with the malic acid as energy and carbon source. Lactic acid was the main metabolite produced in concentration of 4.6 g/L. Acetic and succinic acid were also identified. Sensory evaluation of the fermented Jerusalem artichoke juice and its mixtures with blueberry juice showed that the 50/50 % v/v mixture would be very well accepted by the consumers. Above 80 % of the panelists would buy this drink, and over 60 % were willing to pay more for it. Culture survivability in the fermented juices during storage at 4-7 °C was assayed by the Weibullian model. The product shelf-life was extended from 19.70 ± 0.50 days of pure Jerusalem artichoke juice to 35.7 ± 6.4 days of the mixture containing 30 % blueberry juice.

  10. Variation of Phenolic Content in Globe Artichoke in Relation to Biological, Technical and Environmental Factors

    Directory of Open Access Journals (Sweden)

    Giovanni Mauromicale

    2011-02-01

    Full Text Available In Italy, globe artichoke production is prevailingly concentrated in the South and islands, where it provides an important contribution to the agricultural economy. In recent years, there has been a renewed interest in this crop as a promising source of polyphenols, a heterogeneous class of secondary metabolites characterized by various healthy properties well-documented in literature. The phenolic fraction, present in the different artichoke plant parts, varies widely in relation to biotic and abiotic factors. Therefore, the present study aimed at evaluating the variation of phenolic content in globe artichoke in relation to biological, technical and environmental factors. Two field-experiments were carried out in Sicily (South Italy in two representative cultivation areas, in order to examine the effects of genotype, head fraction, season conditions, planting density and arrangement on the globe artichoke phenolic concentration. Both the total polyphenols and the individual phenolic compounds detected were notably genotype- dependent. Particularly, the high level of caffeoylquinic acids (chlorogenic acid, among others and apigenin 7- O-glucuronide, reported respectively by “Violetto di Sicilia” and “Romanesco clone C3”, could be used to encourage globe artichoke fresh consumption. Total polyphenols content also resulted more abundant in specific accumulation sites within the inflorescence, such as the floral stem and receptacle, and for most of genotypes it decreased during the second year in response to the different meteorological conditions. Additionally, total polyphenols content significantly and linearly increased as plant density increased from 1.0 to 1.8 plant m-2 and it significantly increased by 13% passing from single to twin rows plant arrangement.

  11. The effect of culinary preparation on carbohydrate composition, texture and sensory quality of Jerusalem artichoke tubers (Helianthus tuberosus L.)

    DEFF Research Database (Denmark)

    Bach, Vibe; Bennedbæk-Jensen, Sidsel; Kidmose, Ulla;

    2013-01-01

    The Jerusalem artichoke (Helianthus tuberosus L.) tuber is a root vegetable with excellent gastronomic qualities, however the culinary properties are underexploited. Carbohydrate content, instrumental texture analysis and sensory profiling were used to study the effects of culinary preparation in...

  12. Blood lead exposure concentrations in mottled ducks (Anas fulvigula) on the upper Texas coast

    Science.gov (United States)

    McDowell, Stephen K.; Conway, Warren C.; Haukos, David A.; Moon, Jena A.; Comer, Christopher E.; Hung, I-Kuai

    2015-01-01

    The mottled duck (Anas fulvigula) is a non-migratory waterfowl species dependent upon coastal marsh systems, including those on the Texas Chenier Plain National Wildlife Refuge (NWR) Complex, and considered a regional indicator species of marsh habitat quality. Research from the early 1970s, 1990s, and early-2000s indicated that mottled ducks continued to exhibit elevated wing-bone lead (Pb) concentrations, decades after implementation of non-toxic shot regulations. However, wing-bone concentrations reflect lifetime accumulation of Pb, whereas blood Pb concentrations reflect more recent exposure. To identify current potentially relevant temporal windows of Pb exposure, we collected 260 blood samples from mottled ducks during summer (n=124) and winter (n=136) from 2010–2012 on the Texas Chenier Plain NWR Complex. We quantified baseline blood Pb concentrations for all ages of mottled ducks, and hypothesized that blood lead concentrations would remain elevated above background levels (200 µg L–1) despite the 1983 and 1991 lead shot bans. Blood Pb concentrations ranged from below detection limits to >12,000 µg L–1, where >200 µg L–1 was associated with exposure levels above background concentrations. Male mottled ducks had the greatest blood Pb concentrations (30 times greater than females) with concentrations greater during winter than summer. Likewise, the proportion of exposed (>200 µg L–1) females increased from 14%–47% from summer to winter, respectively. Regardless of sex, adult mottled duck blood Pb concentrations were five times greater than juveniles, particularly during winter. We identified five plausible models that influenced blood Pb levels where year, site, and interactions among age*sex*season and between age*season were included in the top-ranked models. Frequency of exposure was greatest during winter, increasing from 12% in summer to 55% in winter, indicating that a temporal exposure window to environmental Pb exists between nesting

  13. A Rare Case of Non-Small Cell Carcinoma of Lung Presenting as Miliary Mottling

    Directory of Open Access Journals (Sweden)

    Ballaekere Jayaram Subhashchandra

    2013-03-01

    Full Text Available Miliary mottling on chest radiography is seen in miliary tuberculosis, certain fungal infections, sarcoidosis, coal miner’s pneumoconiosis, silicosis, hemosiderosis, fibrosing alveolitis, acute extrinsic allergic alveolitis, pulmonary eosinophilic syndrome, pulmonary alveolar proteinosis, and rarely in hematogenous metastases from the primary cancers of the thyroid, kidney, trophoblasts, and some sarcomas. Although very infrequent, miliary mottling can be seen in primary lung cancers. Herein, we report the case of a 28-year-old female with chest X-ray showing miliary mottling. Thoracic computed tomography (CT features were suggestive of tuberculoma with miliary tuberculosis. CT-guided fine needle aspiration cytology confirmed the diagnosis as lower-lobe, left lung non-small cell carcinoma (adenocarcinoma. It is rare for the non-small cell carcinoma of the lung to present as miliary mottling. The rarity of our case lies in the fact that a young, non-smoking female with miliary mottling was diagnosed with non-small cell carcinoma of the lung.

  14. Chemical and functional properties of the different by-products of artichoke (Cynara scolymus L.) from industrial canning processing.

    Science.gov (United States)

    Ruiz-Cano, Domingo; Pérez-Llamas, Francisca; Frutos, María José; Arnao, Marino B; Espinosa, Cristóbal; López-Jiménez, José Ángel; Castillo, Julián; Zamora, Salvador

    2014-10-01

    In this study, the basic chemical composition and functional properties of six by-product fractions collected from different steps of artichoke industrial processing were evaluated. Fractions differed in thermal treatment, the bract position in the artichoke head and the cutting size. Contents of moisture, ash, protein, fat, dietary fibre, inulin, total phenolics, total flavonoids, caffeoyl derivatives and flavones were analysed. Antioxidant activity values were also determined. All assessed artichoke by-product fractions contained high-dietary fibre (53.6-67.0%) and low fat (2.5-3.7%). Artichoke by-product fractions contained high levels of inulin, especially in the boiled inner bracts (30%). Total phenolic and flavonoid contents and antioxidant activity (153-729 μmol gallic acid equivalents, 6.9-19.2 μmol quercetin equivalents and 85-234 μmol ascorbic acid equivalents per gram of dry matter, respectively) varied widely with the bract positions in the artichoke head and the thermal treatments. The more interesting fractions for use as functional ingredients were those situated closer to the artichoke heart and thermally treated.

  15. Structural determinants of tobacco vein mottling virus protease substrate specificity.

    Science.gov (United States)

    Sun, Ping; Austin, Brian P; Tözsér, József; Waugh, David S

    2010-11-01

    Tobacco vein mottling virus (TVMV) is a member of the Potyviridae, one of the largest families of plant viruses. The TVMV genome is translated into a single large polyprotein that is subsequently processed by three virally encoded proteases. Seven of the nine cleavage events are carried out by the NIa protease. Its homolog from the tobacco etch virus (TEV) is a widely used reagent for the removal of affinity tags from recombinant proteins. Although TVMV protease is a close relative of TEV protease, they exhibit distinct sequence specificities. We report here the crystal structure of a catalytically inactive mutant TVMV protease (K65A/K67A/C151A) in complex with a canonical peptide substrate (Ac-RETVRFQSD) at 1.7-Å resolution. As observed in several crystal structures of TEV protease, the C-terminus (∼20 residues) of TVMV protease is disordered. Unexpectedly, although deleting the disordered residues from TEV protease reduces its catalytic activity by ∼10-fold, an analogous truncation mutant of TVMV protease is significantly more active. Comparison of the structures of TEV and TVMV protease in complex with their respective canonical substrate peptides reveals that the S3 and S4 pockets are mainly responsible for the differing substrate specificities. The structure of TVMV protease suggests that it is less tolerant of variation at the P1' position than TEV protease. This conjecture was confirmed experimentally by determining kinetic parameters k(cat) and K(m) for a series of oligopeptide substrates. Also, as predicted by the cocrystal structure, we confirm that substitutions in the P6 position are more readily tolerated by TVMV than TEV protease.

  16. First report of Cowpea mild mottle Carlavirus on yardlong bean (Vigna unguiculata subsp. sesquipedalis) in Venezuela.

    Science.gov (United States)

    Brito, Miriam; Fernández-Rodríguez, Thaly; Garrido, Mario José; Mejías, Alexander; Romano, Mirtha; Marys, Edgloris

    2012-12-14

    Yardlong bean (Vigna unguiculata subsp. sesquipedalis) plants with virus-like systemic mottling and leaf distortion were observed in both experimental and commercial fields in Aragua State, Venezuela. Symptomatic leaves were shown to contain carlavirus-like particles. RT-PCR analysis with carlavirus-specific primers was positive in all tested samples. Nucleotide sequences of the obtained amplicons showed 84%-74% similarity to corresponding sequences of Cowpea mild mottle virus (CPMMV) isolates deposited in the GenBank database. This is the first report of CPMMV in Venezuela and is thought to be the first report of CPMMV infecting yardlong bean.

  17. First Report of Cowpea Mild Mottle Carlavirus on Yardlong Bean (Vigna unguiculata subsp. sesquipedalis in Venezuela

    Directory of Open Access Journals (Sweden)

    Edgloris Marys

    2012-12-01

    Full Text Available Yardlong bean (Vigna unguiculata subsp. sesquipedalis plants with virus-like systemic mottling and leaf distortion were observed in both experimental and commercial fields in Aragua State, Venezuela. Symptomatic leaves were shown to contain carlavirus-like particles. RT-PCR analysis with carlavirus-specific primers was positive in all tested samples. Nucleotide sequences of the obtained amplicons showed 84%–74% similarity to corresponding sequences of Cowpea mild mottle virus (CPMMV isolates deposited in the GenBank database. This is the first report of CPMMV in Venezuela and is thought to be the first report of CPMMV infecting yardlong bean.

  18. Extraction, degree of polymerization determination and prebiotic effect evaluation of inulin from Jerusalem artichoke.

    Science.gov (United States)

    Li, Wancong; Zhang, Jun; Yu, Chunwei; Li, Qing; Dong, Fang; Wang, Gang; Gu, Guodong; Guo, Zhanyong

    2015-05-05

    The tubers of Jerusalem artichoke are rich of inulin, which makes the plant one of primary inulin resources in China. The aim of this study was to extract inulin from tubers and test the degree of polymerization (DP) 10 days before flowering to 80 days after flowering. The DP of inulin reaches a maximum of 19 at 50 days after flowering. The variation tendencies of inulin content and DP were almost the same, which increase rapidly at the beginning and then decrease gradually at a lower speed. Meanwhile, the effects of inulin on probiotics in yogurt have been evaluated. It indicated that inulin with low DP has higher activities. Experimental data improve the understanding of status change of inulin in whole growth of Jerusalem artichoke tubers in Northeastern China and are instructive to get inulin with different properties.

  19. Characterization and purification of polyphenol oxidase from artichoke (Cynara scolymus L.).

    Science.gov (United States)

    Dogan, Serap; Turan, Yusuf; Ertürk, Hatibe; Arslan, Oktay

    2005-02-09

    In this study, the polyphenol oxidase (PPO) of artichoke (Cynara scolymus L.) was first purified by a combination of (NH(4))(2)SO(4) precipitation, dialysis, and a Sepharose 4B-L-tyrosine-p-aminobenzoic acid affinity column. At the end of purification, 43-fold purification was achieved. The purified enzyme migrated as a single band on sodium dodecyl sulfate-polyacrylamide gel electrophoresis. Polyacrylamide gel electrophoresis indicated that PPO had a 57 kDa molecular mass. Second, the contents of total phenolic and protein of artichoke head extracts were determined. The total phenolic content of artichoke head was determined spectrophotometrically according to the Folin-Ciocalteu procedure and was found to be 425 mg 100 g(-1) on a fresh weight basis. Protein content was determined according to Bradford method. Third, the effects of substrate specificity, pH, temperature, and heat inactivation were investigated on the activity of PPO purified from artichoke. The enzyme showed activity to 4-methylcatechol, pyrogallol, catechol, and L-dopa. No activity was detected toward L-tyrosine, resorsinol, and p-cresol. According to V(max)/K(m) values, 4-methylcatechol (1393 EU min(-1) mM(-1)) was the best substrate, followed by pyrogallol (1220 EU min(-1) mM(-1)), catechol (697 EU min(-1) mM(-1)), and L-dopa (102 EU min(-1) mM(-1)). The optimum pH values for PPO were 5.0, 8.0, and 7.0 using 4-methylcatechol, pyrogallol, and catechol as substrate, respectively. It was found that optimum temperatures were dependent on the substrates studied. The enzyme activity decreased due to heat denaturation of the enzyme with increasing temperature and inactivation time for 4-methylcatechol and pyrogallol substrates. However, all inactivation experiments for catechol showed that the activity of artichoke PPO increased with mild heating, reached a maximum, and then decreased with time. Finally, inhibition of artichoke PPO was investigated with inhibitors such as L-cysteine, EDTA, ascorbic

  20. Physiology and Proteomics of Drought Stress Response in Leaf of Jerusalem Artichoke Seedling

    Institute of Scientific and Technical Information of China (English)

    Meide Zhang; Qiang Chen; Shihua Shen

    2012-01-01

    Drought stress influenced physiological and biochemical process in Jerusalem artichoke (Helianthus tuberosus L.).It caused the decrease of leaf water potential and membrane lipid peroxidation in Jerusalem artichoke.Drought also led to the accumulation of reactive oxygen species (ROS),which could result in the oxidative damage.Two-DE results showed 69 protein spots were changed in cv.Xiuyan.Among them,46 proteins were identified through LC-MS/MS and NCBI database searching.The identified proteins could be sorted into 6 functional categories,including photosynthesis,defense,signal transduction,carbon metabolism,energy and others.Drought stress inhibited expression of some photosynthetic proteins,and also induced the expression of proteins related to defense.In addition,expression of proteins related to signal transduction,carbon metabolism and other functional categories also differed in two cultivars.

  1. Economically Viable Components from Jerusalem Artichoke (Helianthus tuberosus L.) in a Biorefinery Concept

    DEFF Research Database (Denmark)

    Johansson, Eva; Prade, Thomas; Angelidaki, Irini

    2015-01-01

    Biorefinery applications are receiving growing interest due to climatic and waste disposal issues and lack of petroleum resources. Jerusalem artichoke (Helianthus tuberosus L.) is suitable for biorefinery applications due to high biomass production and limited cultivation requirements. This paper...... focuses on the potential of Jerusalem artichoke as a biorefinery crop and the most viable products in such a case. The carbohydrates in the tubers were found to have potential for production of platform chemicals, e.g., succinic acid. However, economic analysis showed that production of platform chemicals...... bioactive activity was found in the young leaves of the crop, and the sesquiterpene lactones are of specific interest, as other compounds from this group have shown inhibitory effects on several human diseases. Thus, future focus should be on understanding the usefulness of small molecules, to develop...

  2. More than multiple introductions: Multiple taxa contribute to the genesis of the invasive California's wild artichoke thistle

    Institute of Scientific and Technical Information of China (English)

    Janet LEAK-GARCIA; Jodie S.HOLT; Seung-Chul KIM; Lisa MU; José A.MEJ(I)AS; Norman C.ELLSTRAND

    2013-01-01

    The history of some invasive species is so complex that their origins can be difficult to determine.One example of such invasive species is the California invasive known as "wild artichoke thistle" (Cynara cardunculus var.sylvestris),found in natural and disturbed ecosystems.Wild artichoke thistle is a Mediterranean native and the progenitor of two domesticated horticultural taxa,artichoke and cardoon.Different hypotheses regarding the origins of California plants have included introductions by 19th century Italian immigrants and the de-domestication (evolutionary reversion to wild-type morphology) of feral (escaped,free-living) cultivars.Using microsatellite markers,we compared the genetic constitutions of 12 artichoke thistle populations in California with possible progenitor populations:17 Spanish and Italian wild populations and eight different artichoke and cardoon cultivars.Each California population was compared with its putative progenitors using STRUCTURE analysis.Our results suggest that California's artichoke thistle populations are polyphyletic.Surprisingly,two-thirds of California's populations closely matched populations from the Iberian Peninsula.Three populations matched domesticated artichoke.One population appears to have wild and cultivar hybrid ancestry.Alleles specific to Italian populations were found at low frequencies in some California plants,suggesting that Italian wild plants may have been in California,but have left a trivial genetic legacy.Given that the de-domesticated plants in this study appear to be as invasive as the wild taxon,we conclude with a discussion of the role that ferality and de-domestication may have in plant invasions.

  3. Studies on Fermentation of Jerusalem artichoke Juice by Beneficial Lactic Acid Bacteria and the Flavor Compounds of Fermented Jerusalem artichoke Juice%乳酸菌发酵菊芋汁及其风味的研究

    Institute of Scientific and Technical Information of China (English)

    李信; 董英; 程新; 刘崇万

    2012-01-01

    对不同品种和产地的菊芋主要成分进行了测定,并利用乳酸菌对菊芋汁进行发酵,研究了不同乳酸菌在菊芋汁中的生长规律、低温存活性及发酵菊芋汁中主要风味物质。结果表明,4种乳酸菌在菊芋汁中均生长良好,最高活菌数可达到10^9CFU/mL;菊芋汁经乳酸菌发酵后具有良好风味,其风味的差异与发酵菌种有关;发酵菊芋汁中乳酸菌在4℃低温贮藏过程中具有较好的低温存活性,4周后活菌数保持在10^9CFU/mL。菊芋汁适用于开发成新的功能性乳酸菌饮料。%Jerusalem artichoke possesses abundant inulin, high content of potassium and low content of sodium. The main nutritional compositions of Jerusalem artichoke from diverse varieties and regions were analyzed. The main purpose of this study was to investigate the growth of four lactic acid bacteria (Lactobacillus plantarum, Lactobacillus casei, Lactobacillus acidophilus, Lactobacillus brevis) on Jerusalem artichoke juice and the production of flavor com- pounds in these bacteria. Growth rule, low-temperature survivability of lactic acid bacteria in Jerusalem artichoke and the major flavor compounds of fermented Jerusalem artichoke juice were considered in this study. In this research it was found that four lactic cultures grew well on the Jerusalem artichoke juice, and the viable cell counts of lactic acid bacteria reached 10^9CFU/mL. Jerusalem artichoke juice that was fermented by beneficial lactic acid bacteria had a good flavor, the main flavor compounds were diverse due to the different species of lactic acid bacteria. Although the lactic cultures of fermented Jerusalem artichoke juice gradually lost their viability during cold storage, the viable cell counts of these lactic acid bacteria still remained at 10^8CFU/mL after 4 weeks of refrigeration at 4℃. The results of this study showed that Jerusalem artichoke juice was a potential substrate to be used for healthy

  4. 2-D DIGE analysis of UV-C radiation-responsive proteins in globe artichoke leaves.

    Science.gov (United States)

    Falvo, Sara; Di Carli, Mariasole; Desiderio, Angiola; Benvenuto, Eugenio; Moglia, Andrea; America, Twan; Lanteri, Sergio; Acquadro, Alberto

    2012-02-01

    Plants respond to ultraviolet stress inducing a self-defence through the regulation of specific gene family members. The UV acclimation is the result of biochemical and physiological processes, such as enhancement of the antioxidant enzymatic system and accumulation of UV-absorbing phenolic compounds (e.g. flavonoids). Globe artichoke is an attractive species for studying the protein network involved in UV stress response, being characterized by remarkable levels of inducible antioxidants. Proteomic tools can assist the evaluation of the expression patterns of UV-responsive proteins and we applied the difference in-gel electrophoresis (DIGE) technology for monitoring the globe artichoke proteome variation at four time points following an acute UV-C exposure. A total of 145 UV-C-modulated proteins were observed and 119 were identified by LC-MS/MS using a ∼144,000 customized Compositae protein database, which included about 19,000 globe artichoke unigenes. Proteins were Gene Ontology (GO) categorized, visualized on their pathways and their behaviour was discussed. A predicted protein interaction network was produced and highly connected hub-like proteins were highlighted. Most of the proteins differentially modulated were chloroplast located, involved in photosynthesis, sugar metabolisms, protein folding and abiotic stress. The identification of UV-C-responsive proteins may contribute to shed light on the molecular mechanisms underlying plant responses to UV stress.

  5. Ethanol production from Jerusalem artichoke tubers (Helianthus tuberosus) using Kluyveromyces marxianus and Saccharomyces rosei

    Energy Technology Data Exchange (ETDEWEB)

    Margaritis, A.; Bajpai, P.

    1982-04-01

    This article examines the potential of Jerusalem artichoke as a source for ethanol and single-cell protein SCP. In addition, experimental results are presented on batch fermentation kinetics employing two strains of Kluyveromyces marxianus and one strain of Saccharomyces rosei grown in the extract derived from the tubers of Jeusalem artichoke. Of the three cultures examined, Kluyveromyces marxianus UCD (EST) 55-82 was found to be the best producer of ethanol grown in a simple medium at 35/sup 0/C. The ethanol production was found to be growth-associated haveing a ..mu../sub max/ = 0.41 h/sup -1/ and the ethanol and biomass yields were determined to be Y/sub p///sub = 0.45 (88% of the theoretical) and Y/sub x///sub s/ = 0.04 with 92% of the original sugars utilized. On the basis of carbohydrate yields of Jerusalem artichoke reported in the literature and these batch kinetic studies with K. marxianus, the calculated ethanol yields were found to range from 1400 kg ethanol acre/sup -1/ yr /sup -1/ to a maximum of 2700 kg ethanol acre/sup -1/ yr/sup -1/. The SCP yields for K. marxianus were calculated to range between 130 to 250 kg dry wt cell acre/sup -1/ yr/sup -1/. The potential for developing an integrated process to produce ethanol and SCP is also discussed.

  6. Ethanol production from Jerusalem artichoke tubers (Helianthus tuberosus). Using Kluyveromyces marxcianus and Saccharomyces rosei

    Energy Technology Data Exchange (ETDEWEB)

    Margaritis, A.; Bajpai, P.

    1982-04-01

    This article examines the potential of Jerusalem artichoke as a source for ethanol and single-cell protein SCP. In addition, experimental results are presented on batch fermentation kinetics employing two strains of Kluyveromyces marxianus and one strain of Saccharomyces rosei grown on the extract derived from the tubers of Jerusalem artichoke. Of the three cultures examined, Kluyveromyces marxianus UCD (FST) 55-82 was found to be the best producer of ethanol grown in a simple medium at 35 degrees C. The ethanol production was found to be growth-associated having a mu max = 0.41/h and the ethanol and biomass yields were determined to be Y p/s = 0.45 (88% of the theoretical) and Y x/s = 0.04 with 92% of the original sugars utilized. On the basis of carbohydrate yields of Jerusalem artichoke reported in the literature and these batch kinetic studies with Kluyveromyces marxianus, the calculated ethanol yields were found to range from 1400 kg ethanol/acre/yr to a maximum of 2700 kg ethanol/acre/yr. The SCP yields for Kluyveromyces marxianus were calculated to range between 130 to 250 kg dry wt cell/acre/yr. The potential for developing an integrated process to produce ethanol and SCP is also discussed. (Refs. 27).

  7. Preparation of high-fructose syrup from the tubers of the Jerusalem artichoke (Helianthus tuberosus L.

    Science.gov (United States)

    Fleming, S E; GrootWassink, J W

    1979-11-01

    Fructose has recently received much attention due to renewed interest in natural sweeteners. In addition, fructose has some advantages to sucrose in sweetness, solubility, viscosity, and dental health characteristics. Fructose is deposited as storage fructans of the inulin (beta-1,2) type in tubers and rhizomes of the Compositae family. The utilization of the Jerusalem artichoke (Helianthus tuberosus) tuber as a source of fructose syrup is discussed. This plant has the potential to produce more sugar per acre than corn or sugar beets. In addition, the artichoke has higher frost resistance and lower heat unit requirements than corn and is somewhat more tolerant to low moisture conditions than sugar beets. A high quality fructose syrup can be produced from artichoke tubers. The extraction step was found to be particularly important since development of adverse colors and flavors must be prevented. The fructans may be acid or enzyme hydrolyzed but the latter method gave a higher quality syrup. Ion-exchange resins and activated charcoal were effective in removing coloring and flavoring materials, and also reduced other noncarbohydrate constituents. Since the enzymatic hydrolysis of the fructans is an attractive alternative to acid hydrolysis, a process was developed for producing and purifying a special beta-fructofuranosidase (inulase) from Saccharomyces fragilis. Inulase has a much higher specificity for fructans than commerically available beta-fructofuranosidase (invertase).

  8. Molecular cloning of dsRNAs associated with strawberry mottle virus

    NARCIS (Netherlands)

    Schoen, C.D.; Miglino, R.; Jelkmann, W.; Leone, G.

    1998-01-01

    Strawberry mottle virus was transmitted from Fragaria vesca to Chenopodium quinoa and Nicotiana occidentalis 37B. In all plants, SMoV infection-associated dsRNA was detected but dsRNA patterns showed some differences between the herbaceous hosts. The differences were more evident when the dsRNA prep

  9. Genetic diversity, host range and disease resistance to the emerging Tomato mottle mosaic virus on tomato

    Science.gov (United States)

    Since its first discovery in 2013 in Mexico, Tomato mottle mosaic virus (ToMMV), a new tomato-infecting tobamovirus is now present in a number of countries (i.e., Brazil, China, and Israel) and several states in the U.S. There is little information available on the molecular and biological properti...

  10. First complete genome sequence of an emerging cucumber green mottle mosaic virus isolate in North America

    Science.gov (United States)

    The complete genome sequence (6,423 nt) of an emerging Cucumber green mottle mosaic virus (CGMMV) isolate on cucumber in North America was determined through deep sequencing of sRNA and rapid amplification of cDNA ends. It shares 99% nucleotide sequence identity to the Asian genotype, but only 90% t...

  11. Complete Genome Sequence of a Carnation Mottle Virus Infecting Hop Plants

    OpenAIRE

    Jo, Yeonhwa; Choi, Hoseong; Cho, Won Kyong

    2015-01-01

    The Carnation mottle virus (CarMV) is a single positive-strand RNA virus belonging to the genus Carmovirus. The major natural host for CarMV is the carnation. In this study, using transcriptome data, we provide for the first time a nearly complete genome sequence of CarMV infecting hop plants.

  12. Phenotypical and molecular characterization of the Tomato mottle Taino virus-Nicotiana megalosiphon interaction

    NARCIS (Netherlands)

    Collazo, C.; Ramos, P.L.; Chacón, O.; Borroto, C.J.; López, Y.; Pujol, M.; Thomma, B.P.H.J.; Hein, I.; Borrás-Hidalgo, O.

    2005-01-01

    Tomato mottle Taino virus (ToMoTV) infection causes significant yield losses in plants of various Solanaceous species. In this study, the interaction between Nicotiana megalosiphon and ToMoTV was characterized on a phenotypical and molecular basis. In order to isolate genes that are differentially e

  13. Complete Genome Sequence of a Tomato Isolate of Parietaria Mottle Virus from Italy.

    Science.gov (United States)

    Martínez, Carolina; Aramburu, José; Rubio, Luis; Galipienso, Luis

    2015-12-17

    We report here the complete genome sequence of isolate T32 of parietaria mottle virus (PMoV) infecting tomato plants in Turin, Italy, obtained by Sanger sequencing. T32 shares 90.48 to 96.69% nucleotide identity with other two PoMV isolates, CR8 and Pe1, respectively, whose complete genome sequences are available.

  14. Complete Genome Sequence of a Tomato-Infecting Tomato Mottle Mosaic Virus in New York

    OpenAIRE

    Padmanabhan, Chellappan; Zheng, Yi; Li, Rugang; Martin, Gregory B.; Fei, Zhangjun; Ling, Kai-Shu

    2015-01-01

    The complete genome sequence of an isolate of tomato mottle mosaic virus (ToMMV) infecting tomatoes in New York was obtained using small RNA (sRNA) deep sequencing. ToMMV_NY-13 shared 99% sequence identity with isolates from Mexico and Florida. Broader distribution of this emerging virus is a cause for concern to the tomato industry.

  15. Thermotolerant Kluyveromyces marxianus and Saccharomyces cerevisiae strains representing potentials for bioethanol production from Jerusalem artichoke by consolidated bioprocessing

    Energy Technology Data Exchange (ETDEWEB)

    Hu, Nan [Agricultural Univ., Qingdao, SD (China). College of Animal Science and Technology; Chinese Academy of Sciences, Qingdao, SD (China). Key Lab. of Biofuels; Yuan, Bo; Wang, Shi-An; Li, Fu-Li [Chinese Academy of Sciences, Qingdao, SD (China). Key Lab. of Biofuels; Sun, Juan [Agricultural Univ., Qingdao, SD (China). College of Animal Science and Technology

    2012-09-15

    Thermotolerant inulin-utilizing yeast strains are desirable for ethanol production from Jerusalem artichoke tubers by consolidated bioprocessing (CBP). To obtain such strains, 21 naturally occurring yeast strains isolated by using an enrichment method and 65 previously isolated Saccharomyces cerevisiae strains were investigated in inulin utilization, extracellular inulinase activity, and ethanol fermentation from inulin and Jerusalem artichoke tuber flour at 40 C. The strains Kluyveromyces marxianus PT-1 (CGMCC AS2.4515) and S. cerevisiae JZ1C (CGMCC AS2.3878) presented the highest extracellular inulinase activity and ethanol yield in this study. The highest ethanol concentration in Jerusalem artichoke tuber flour fermentation (200 g L{sup -1}) at 40 C achieved by K. marxianus PT-1 and S. cerevisiae JZ1C was 73.6 and 65.2 g L{sup -1}, which corresponded to the theoretical ethanol yield of 90.0 and 79.7 %, respectively. In the range of 30 to 40 C, temperature did not have a significant effect on ethanol production for both strains. This study displayed the distinctive superiority of K. marxianus PT-1 and S. cerevisiae JZ1C in the thermotolerance and utilization of inulin-type oligosaccharides reserved in Jerusalem artichoke tubers. It is proposed that both K. marxianus and S. cerevisiae have considerable potential in ethanol production from Jerusalem artichoke tubers by a high temperature CBP. (orig.)

  16. Carbon sequestration and Jerusalem artichoke biomass under nitrogen applications in coastal saline zone in the northern region of Jiangsu, China.

    Science.gov (United States)

    Niu, Li; Manxia, Chen; Xiumei, Gao; Xiaohua, Long; Hongbo, Shao; Zhaopu, Liu; Zed, Rengel

    2016-10-15

    Agriculture is an important source of greenhouse gases, but can also be a significant sink. Nitrogen fertilization is effective in increasing agricultural production and carbon storage. We explored the effects of different rates of nitrogen fertilization on biomass, carbon density, and carbon sequestration in fields under the cultivation of Jerusalem artichoke as well as in soil in a coastal saline zone for two years. Five nitrogen fertilization rates were tested (in guream(-2)): 4 (N1), 8 (N2), 12 (N3), 16 (N4), and 0 (control, CK). The biomass of different organs of Jerusalem artichoke during the growth cycle was significantly higher in N2 than the other treatments. Under different nitrogen treatments, carbon density in organs of Jerusalem artichoke ranged from 336 to 419gCkg(-1). Carbon sequestration in Jerusalem artichoke was higher in treatments with nitrogen fertilization compared to the CK treatment. The highest carbon sequestration was found in the N2 treatment. Soil carbon content was higher in the 0-10cm than 10-20cm layer, with nitrogen fertilization increasing carbon content in both soil layers. The highest soil carbon sequestration was measured in the N2 treatment. Carbon sequestration in both soil and Jerusalem artichoke residue was increased by nitrogen fertilization depending on the rates in the coastal saline zone studied.

  17. The use of dry Jerusalem artichoke as a functional nutrient in developing extruded food with low glycaemic index.

    Science.gov (United States)

    Radovanovic, Ana; Stojceska, Valentina; Plunkett, Andrew; Jankovic, Slobodan; Milovanovic, Dragan; Cupara, Snezana

    2015-06-15

    This study considers the use of dry Jerusalem artichoke (JA) as a functional nutrient in developing food products with enhanced nutritional characteristics and low glycaemic index (GI). Three different formulations based on buckwheat and JA were developed and processed using extrusion technology. Nutritional properties including the levels of total dietary fibre (TDF), protein, inulin, total carbohydrates and lipids were analysed. A clinical study was performed on ten healthy volunteers (aged between 21 and 56) to determine the level of GI and glycaemic load (GL). The results revealed that JA significantly (Pfood and extruded products, GI and GL. Samples containing 80% of Jerusalem artichoke were considered as a low GI food whilst samples containing 30% and 60% of Jerusalem artichoke as a medium GI food. A similar trend was seen in terms of GL.

  18. Balance between salt stress and endogenous hormones influence dry matter accumulation in Jerusalem artichoke.

    Science.gov (United States)

    Shao, Tianyun; Li, Lingling; Wu, Yawen; Chen, Manxia; Long, Xiaohua; Shao, Hongbo; Liu, Zhaopu; Rengel, Zed

    2016-10-15

    Salinity is one of the most serious environmental stresses limiting agricultural production. Production of Jerusalem artichoke on saline land is strategically important for using saline land resources. The interaction between plant hormones and salinity stress in governing Jerusalem artichoke (Helianthus tuberosus) growth is unclear. Jerusalem artichoke (variety Nanyu-1) was grown under variable salinity stress in the field, and a role of endogenous hormones [zeatin (ZT), auxins (IAA), gibberellins (GA3) and abscisic acid (ABA)] in regulating sugar and dry matter accumulation in tubers was characterized. Under mild salt stress (≤2.2gNaClkg(-1) soil), Nanyu-1 grew well with no significant alteration of dry matter distribution to stems and tubers. In contrast, under moderate salt stress (2.7gNaClkg(-1) soil), the distribution to stem decreased and to tubers decreased significantly. Mild salt stress induced sugar accumulation in tubers at the beginning of the tuber-expansion period, but significantly inhibited (i) transfer of non-reducing sugars to tubers, and (ii) polymerization and accumulation of fructan during the tuber-expansion stage. Under different salinity stress, before the stolon growth, the ratio of IAA/ABA in leaves increased significantly and that of GA3/ABA increased slightly; during tuber development, these ratios continued to decrease and reached the minimum late in the tuber-expansion period. While, salt stress inhibited (i) underground dry matter accumulation, (ii) tuber dry matter accumulation efficiency, (iii) transport of non-reducing sugars to tubers, and (iv) fructan accumulation efficiency during the tuber-expansion period; these effects were accompanied by significantly decreased tuber yield with an increase in salinity. With soil salinity increasing, the synthesis of IAA and GA3 was inhibited in leaves and tubers, while ABA synthesis was stimulated. In brief, tuber yield would significantly decreased with the increase of salinity.

  19. Nitrogen and sugar content variability in tubers of Jerusalem artichoke (Helianthus tuberosus

    Directory of Open Access Journals (Sweden)

    Terzić Sreten

    2009-01-01

    Full Text Available Several nutritive values for tubers of 114 Jerusalem artichoke (Helianthus tuberosus populations were evaluated during 2006. The used material is a part of wild sunflower species collection at the Institute of field and vegetable crops and it is situated in Rimski Šancevi, Novi Sad. The samples were analyzed as fresh tubers on 'Venema' automatic laboratory for alpha amino nitrogen, sodium and potassium content. Total sugar content was determined as the brix value on a refractometer. Total nitrogen was determined by the Kjeldahl method on dried samples. Significant variability was found for all analyzed traits. Total nitrogen varied from 0,695 to 2,179% dry weight (mean 1,23%, alpha amino nitrogen content 0,012 to 0,118% fresh weight (m. 0,07%, potassium 0,231 0,452% fresh weight (m. 0,403% and sodium 0,0003 - 0,0143% fresh weight (m. 0,007%. Total sugar content varied from 13,69 - 22,94% fresh weight (m. 19,14%. Alpha amino nitrogen is an essential nutrient for animals so that it's presence in tubers of Jerusalem artichoke as food is positive. The protein content is similar to the one in potato and as such satisfactory for nutrition. The K/Na ratio is high which is useful, because an increased content of potassium in food can positively affect the reduction of Na/K ratio and lower systolic blood pressure by a significant amount in adults with mild hypertension. Inulin makes up to 80% of the total sugar content in the tubers of Jerusalem artichoke, and as a dietary fiber and a fructose polymer it positively influences digestion and sugar blood levels. The obtained results suggest that selection of cultivars and populations with inappropriate nutritive values is possible. Further research is needed to estimate the share of genetic in total variability and to determine whether the selection for new cultivars is justified.

  20. The miRNAome of globe artichoke: conserved and novel micro RNAs and target analysis

    Directory of Open Access Journals (Sweden)

    De Paola Domenico

    2012-01-01

    Full Text Available Abstract Background Plant microRNAs (miRNAs are involved in post-transcriptional regulatory mechanisms of several processes, including the response to biotic and abiotic stress, often contributing to the adaptive response of the plant to adverse conditions. In addition to conserved miRNAs, found in a wide range of plant species a number of novel species-specific miRNAs, displaying lower levels of expression can be found. Due to low abundance, non conserved miRNAs are difficult to identify and isolate using conventional approaches. Conversely, deep-sequencing of small RNA (sRNA libraries can detect even poorly expressed miRNAs. No miRNAs from globe artichoke have been described to date. We analyzed the miRNAome from artichoke by deep sequencing four sRNA libraries obtained from NaCl stressed and control leaves and roots. Results Conserved and novel miRNAs were discovered using accepted criteria. The expression level of selected miRNAs was monitored by quantitative real-time PCR. Targets were predicted and validated for their cleavage site. A total of 122 artichoke miRNAs were identified, 98 (25 families of which were conserved with other plant species, and 24 were novel. Some miRNAs were differentially expressed according to tissue or condition, magnitude of variation after salt stress being more pronounced in roots. Target function was predicted by comparison to Arabidopsis proteins; the 43 targets (23 for novel miRNAs identified included transcription factors and other genes, most of which involved in the response to various stresses. An unusual cleaved transcript was detected for miR393 target, transport inhibitor response 1. Conclusions The miRNAome from artichoke, including novel miRNAs, was unveiled, providing useful information on the expression in different organs and conditions. New target genes were identified. We suggest that the generation of secondary short-interfering RNAs from miR393 target can be a general rule in the plant

  1. Optimization studies for the bioconversion of Jerusalem artichoke tubers to ethanol and microbial biomass

    Energy Technology Data Exchange (ETDEWEB)

    Margaritis, A.; Bajpai, P.; Cannell, E.

    1981-01-01

    A total of 8 yeast and other microbial cultures were grown in the extract derived from the tubers of Jerusalem artichoke (Helianthus tuberosus) and screened according to the following optimization criteria: rates and yields of ethanol production, rates and yields of biomass production, and percent of original sugars utilized during fermentation. Batch growth kinetic parameters were also determined for the cultures studied. Kluyveromyces marxianus UCD (FST) 55-82 had the highest specific growth rate, 0.41/h, with a high ethanol yield, 88% of theoretical.

  2. CyMSatDB: The Globe Artichoke (Cynara cardunculus var. scolymus) Microsatellite Database

    DEFF Research Database (Denmark)

    Portis, Ezio; Portis, Flavio; Valente, Luisa;

    The first high-quality genome assembly of the globe artichoke (Cynara cardunculus var. scolymus) has been recently produced at the DISAFA (Plant Genetics and Breeding) within the Compositae Genome Project (Scaglione et al. 2014, XXII PAG Conference). The assembly contains 13K scaffolds (N50= 125...... in a MySQL database and provides an effective and responsive interface developed in PHP. To cater the customized needs of wet lab, features with a novelty of an automated primer designing tool is added. The feature of user defined primer designing has great advantage in terms of precise selection from...

  3. CyMSatDB: The Globe Artichoke (Cynara cardunculus var. scolymus) Microsatellite Database

    DEFF Research Database (Denmark)

    Portis, Ezio; Portis, Flavio; Valente, Luisa;

    2015-01-01

    The first high-quality genome assembly of the globe artichoke (Cynara cardunculus var. scolymus) has been recently produced at the DISAFA (Plant Genetics and Breeding) within the Compositae Genome Project (Scaglione et al. 2014, XXII PAG Conference). The assembly contains 13K scaffolds (N50= 125...... in a MySQL database and provides an effective and responsive interface developed in PHP. To cater the customized needs of wet lab, features with a novelty of an automated primer designing tool is added. The feature of user defined primer designing has great advantage in terms of precise selection from...

  4. Survey of Cherry necrotic rusty mottle virus and Cherry green ring mottle virus incidence in Korea by Duplex RT-PCR

    Directory of Open Access Journals (Sweden)

    Seung-Yeol Lee

    2014-12-01

    Full Text Available The incidence of Cherry necrotic rusty mottle virus (CNRMV and Cherry green ring mottle virus (CGRMV have recently been occurred in Korea, posing a problem for sweet cherry cultivation. Since infected trees have symptomless leaves or ring-like spots on the pericarp, it is difficult to identify a viral infection. In this study, the incidence of CNRMV and CGRMV in sweet cherry in Gyeongbuk province was surveyed using a newly developed duplex reverse transcriptase polymerase chain reaction (RT-PCR method that can detect both viruses in a single reaction. CNRMV and CGRMV co-infection rates were 29.6%, 53.6%, and 17.6%, respectively, in samples collected from three different sites (Daegu, Gyeongju and Gyeongsan in Gyeongbuk province during 2012 and 2013. This duplex RT-PCR method offers a simple, rapid, and effective way of identifying CNRMV and CGRMV simultaneously in sweet cherry trees, which can aid in the management of viral infections that could undermine yield.

  5. Simultaneous detection of Cherry necrotic rusty mottle virus and Cherry green ring mottle virus using real-time PCR and high resolution melting analysis.

    Science.gov (United States)

    Komorowska, Beata; Fiore, Nicola; Zamorano, Alan; Li, Ruhui

    2014-08-01

    In this study, the real-time PCR assays were combined with high resolution melting (HRM) analysis for the simultaneous detection of Cherry necrotic rusty mottle virus (CNRMV) and Cherry green ring mottle virus (CGRMV) infection in sweet cherry trees. Detection of CNRMV and CGRMV was performed in a real-time PCR using a primer set for both of them or duplex real-time PCR that included one specific primer set for each virus. These two strategies allowed us to confirmed virus infection in all tested samples. In 17 field samples the technique revealed samples positive for CNRMV or CGRMV as well as positive for both viruses. In addition, the HRM analysis made it possible to differentiate clearly between CNRMV and CGRMV. Sequence variations among CNRMV and CGRMV isolates observed from the HRM peaks were confirmed by sequencing. To test the capability to use this method in field, forty one sweet cherry samples were examined by HRM analysis. The HRM data showed that seven samples were positive for CNRMV and three were infected with CGRMV. The results presented in this study indicated that real-time PCR followed by HRM analysis provides sensitive, automated and rapid tool to detect and differentiate between CNRMV and CGRMV isolates.

  6. Enzymatic browning and after-cooking darkening of Jerusalem artichoke tubers (Helianthus tuberosus L.)

    DEFF Research Database (Denmark)

    Bach, Vibe; Bennedbæk-Jensen, Sidsel; Clausen, Morten Rahr;

    2013-01-01

    Jerusalem artichoke tubers (Helianthus tuberosus L.) undergo enzymatic browning when peeled or cut, and turn grey after boiling, due to after-cooking darkening reactions between iron and phenolic acids. In an attempt to reveal the components responsible for these discolouration reactions, sensory...

  7. Direct lactic acid fermentation of Jerusalem artichoke tuber extract using Lactobacillus paracasei without acidic or enzymatic inulin hydrolysis.

    Science.gov (United States)

    Choi, Hwa-Young; Ryu, Hee-Kyoung; Park, Kyung-Min; Lee, Eun Gyo; Lee, Hongweon; Kim, Seon-Won; Choi, Eui-Sung

    2012-06-01

    Lactic acid fermentation of Jerusalem artichoke tuber was performed with strains of Lactobacillus paracasei without acidic or enzymatic inulin hydrolysis prior to fermentation. Some strains of L. paracasei, notably KCTC13090 and KCTC13169, could ferment hot-water extract of Jerusalem artichoke tuber more efficiently compared with other Lactobacillus spp. such as L. casei type strain KCTC3109. The L. paracasei strains could utilize almost completely the fructo-oligosaccharides present in Jerusalem artichoke. Inulin-fermenting L. paracasei strains produced c.a. six times more lactic acid compared with L. casei KCTC3109. Direct lactic fermentation of Jerusalem artichoke tuber extract at 111.6g/L of sugar content with a supplement of 5 g/L of yeast extract by L. paracasei KCTC13169 in a 5L jar fermentor produced 92.5 ce:hsp sp="0.25"/>g/L of lactic acid with 16.8 g/L fructose equivalent remained unutilized in 72 h. The conversion efficiency of inulin-type sugars to lactic acid was 98% of the theoretical yield.

  8. Establishment of fungal entomopathogens Beauveria bassiana and Bionectria ochroleuca (Ascomycota: Hypocreales) as endophytes on artichoke Cynara scolymus.

    Science.gov (United States)

    Guesmi-Jouini, J; Garrido-Jurado, I; López-Díaz, C; Ben Halima-Kamel, M; Quesada-Moraga, E

    2014-06-01

    Entomopathogenic fungi (EPF) are commonly found in diverse habitats and are known to cause mycoses in many different taxa of arthropods. Various unexpected roles have been recently reported for fungal entomopathogens, including their presence as fungal endophytes, plant disease antagonists, rhizosphere colonizers and plant growth promoting fungi. In Tunisia, a wide range of indigenous EPF isolates from different species, such as Beauveria bassiana and Bionectria ochroleuca, were found to occur in the soil, and to be pathogenic against the artichoke aphid Capitophorus elaeagni (Hemiptera: Aphididae). Since endophytic fungi are recently regarded as plant-defending mutualists and their presence in internal plant tissue has been discussed as an adaptive protection against insects, we were interested on elucidating the possible endophytic behavior of B. bassiana and B. ochroleuca on artichoke, Cynara scolymus, after foliar spraying tehcnique. The leaf spray inoculation method was effective in introducing the inoculated fungi into the plant tissues and showed, then, an endophytic activity on artichoke even 10 days later. According S-N-K test, there was significant differences between the two fungal treatments, B. ochroleuca (84% a) and B. bassiana (78% a), and controls (0% b). Likewise, the inoculated entomopathogenic fungi were also isolated from new leaves even though with significant differences respectively between controls (0% c), B. bassiana (56% b) and B. ochroleuca (78% a). These results reveals significant new data on the interaction of inoculated fungi with artichoke plant as ecological roles that can be exploited for the protection of plants.

  9. Screening of Jerusalem artichoke varieties for bio-ethanol production in Portugal

    Energy Technology Data Exchange (ETDEWEB)

    Passarinho, P.C.; Oliveira, A.C.; Rosa, M.F. [INETI, Departamento de Energias Renovaveis, Estrada do Paco do Lumiar, Ed. G, 1649-038, Lisboa (Portugal)

    2008-07-01

    The aim of this work was the evaluation of the potential of 9 Jerusalem artichoke varieties for the sustainable production of bio-ethanol in Portugal. The tubers, which are the part of the plant with higher sugar content, were harvested at different stages of development (29 to 55 weeks), and crashed for juice extraction. The two phases obtained were characterized in terms of total sugars, protein, ash and dry matter. The ethanol productivity of the different J. artichoke varieties was then evaluated fermenting juice or mixtures of juice and pulp aqueous extract with a strain of Kluyveromyces marxianus, a yeast able to hydrolyze and ferment inulin polymers. The chamical characteristic more dependable on the harvest period was the amount of total sugars in the tubers. Juices, obtained until 48 weeks development, contained 173 - 235 g/L of total sugars while juices from the last harvest presented markedly lower sugar contents, indicating crop degradation or sugar migration to the soil. Regarding the fermentative process, ethanol yields ranged from 0.3 to 0.5 g/g. The main conclusion of this work indicates C13 variety as the best. Although bearing a lower sugar concentration in tubers, the substantially higher agricultural productivities (kg/m2) after 8 months growing allowed to estimate productions higher than 10 000 L/ha.

  10. Green direct determination of mineral elements in artichokes by infrared spectroscopy and X-ray fluorescence.

    Science.gov (United States)

    Mir-Marqués, Alba; Martínez-García, Maria; Garrigues, Salvador; Cervera, M Luisa; de la Guardia, Miguel

    2016-04-01

    Near infrared (NIR) and X-ray fluorescence (XRF) spectroscopy were investigated to predict the concentration of calcium, potassium, iron, magnesium, manganese and zinc in artichoke samples. Sixty artichokes were purchased from different Spanish areas (Benicarló, Valencia and Murcia). NIR and XRF spectra, combined with partial least squares (PLS) data treatment, were used to develop chemometric models for the prediction of mineral concentration. To obtain reference data, samples were mineralised and analysed by inductively coupled plasma optical emission spectrometry (ICP-OES). Coefficients of determination obtained for the regression between predicted values and reference ones for calcium, potassium, magnesium, iron, manganese and zinc were 0.61, 0.79, 0.53, 0.77, 0.54 and 0.60 for NIR and 0.96, 0.93, 0.80, 0.79, 0.76 and 0.90 for XRF, respectively. Both assayed methodologies, offer green alternatives to classical mineral analysis, but XRF provided the best results in order to be used as a quantitative screening method.

  11. Effect of Lactobacillus paracasei Culture Filtrates and Artichoke Polyphenols on Cytokine Production by Dendritic Cells

    Science.gov (United States)

    Sisto, Angelo; Luongo, Diomira; Treppiccione, Lucia; De Bellis, Palmira; Di Venere, Donato; Lavermicocca, Paola; Rossi, Mauro

    2016-01-01

    The most recent trend in research on probiotic bacteria aims at the exploitation of bioactive bacterial compounds that are responsible for health-promoting effects and suitable for medical applications. Therefore, the main purpose of this study was to ascertain if the immunomodulatory effects of L. paracasei strains on dendritic cells (DCs) were caused by bacterial metabolites released in the culture medium. For that reason, bacterial strains were grown in two media generally used for the culture of DCs, and the effects of culture filtrates on the maturation of DCs and cytokine production were evaluated. Moreover, to reveal potential synergistic effects on the immunomodulation of DCs, an artichoke phenolic extract (APE) was added to the media before bacterial growth. The experiments pointed out an interesting anti-inflammatory activity of a culture filtrate obtained after growing a probiotic L. paracasei strain in one of the media supplemented with APE. Therefore, this culture filtrate—which combines the anti-inflammatory activity and the other well-known health-promoting properties of artichoke phenolic compounds—could represent the basis for future particular exploitations. PMID:27754398

  12. Economically Viable Components from Jerusalem Artichoke (Helianthus tuberosus L. in a Biorefinery Concept

    Directory of Open Access Journals (Sweden)

    Eva Johansson

    2015-04-01

    Full Text Available Biorefinery applications are receiving growing interest due to climatic and waste disposal issues and lack of petroleum resources. Jerusalem artichoke (Helianthus tuberosus L. is suitable for biorefinery applications due to high biomass production and limited cultivation requirements. This paper focuses on the potential of Jerusalem artichoke as a biorefinery crop and the most viable products in such a case. The carbohydrates in the tubers were found to have potential for production of platform chemicals, e.g., succinic acid. However, economic analysis showed that production of platform chemicals as a single product was too expensive to be competitive with petrochemically produced sugars. Therefore, production of several products from the same crop is a must. Additional products are protein based ones from tubers and leaves and biogas from residues, although both are of low value and amount. High bioactive activity was found in the young leaves of the crop, and the sesquiterpene lactones are of specific interest, as other compounds from this group have shown inhibitory effects on several human diseases. Thus, future focus should be on understanding the usefulness of small molecules, to develop methods for their extraction and purification and to further develop sustainable and viable methods for the production of platform chemicals.

  13. Protective Role of Ca Against NaCl Toxicity in Jerusalem Artichoke by Up-Regulation of Antioxidant Enzymes

    Institute of Scientific and Technical Information of China (English)

    XUE Yan-Feng; LIU Ling; LIU Zhao-Pu; S. K.MEHTA; ZHAO Geng-Mao

    2008-01-01

    The ameliorative effect of external Ca2+ on Jerusalem artichoke (Helianthus tuberosus L.) under salt stress was studied through biochemical and physiological analyses of Jerusalem artichoke seedlings treated with or without 10 mol L-1 CaCl2, 150 mmol L-1 NaCl, and/or 5 mmol L-1 ethylene-bis(oxyethylenenitrilo)-tetraacetic acid (EGTA) for five days. Exposure to NaCl (150 mmol L-1) decreased growth, leaf chlorophyll content, and photosynthetic rate of Jerusalem artichoke seedlings. NaCl treatment showed 59% and 37% higher lipid peroxidation and electrolyte leakage, respectively, than the control. The activities of superoxide dismutase (SOD), peroxidase (POD), and catalase (CAT) were decreased by NaCl, indicating an impeded antioxidant defense mechanism of Jerusalem artichoke grown under salt stress. Addition of 10 mmol L-1 CaCl2 to the salt solutions significantly decreased the damaging effect of NaCl on growth and chlorophyll content and simultaneously restored the rate of photosynthesis almost to the level of the control. Ca2+ addition decreased the leaf malondialdehyde (MDA) content and electrolyte leakage from NaCl-treated seedlings by 47% and 24%, respectively, and significantly improved the activities of SOD, POD, and CAT in NaCl-treated plants. Addition of ECTA, a specific chelator of Ca2+, decreased the growth, chlorophyll content, and photosynthesis, and increased level of MDA and electrolyte leakage from NaCl-treated plants and from the control plants. ECTA addition to the growth medium also repressed the activities of SOD, POD, and CAT in NaCl-treated and control seedlings. External Ca2+ might protect Jerusalem artichoke against NaCl stress by up-regulating the activities of antioxidant enzymes and thereby decreasing the oxidative stress.

  14. Saturation-transfer ESR spectroscopy on maleimide spin-labeled cowpea chlorotic mottle virus

    Science.gov (United States)

    Vriend, G.; Schilthuis, J. G.; Verduin, B. J. M.; Hemminga, M. A.

    1984-07-01

    One of the two SH groups of the coat protein of Cowpea chlorotic mottle virus (CCMV) was spin-labeled with 3-maleimido-2,2,5,5-tetramethyl-l-pyrrolodinyloxyl. Both electron spin resonance and saturation-transfer electron spin resonance spectra were recorded of intact CCMV and CCMV in which the protein subunits are cross-linked with glutaraldehyde. From an analysis of these spectra it follows that the spin label performs a local anisotropic motion with respect to the protein to which it is attached. It is also concluded that no internal protein mobility is present on the ST-ESR timescale.

  15. Kinetics of ethanol production from Jerusalem artichoke juice with some Kluyveromyces species

    Energy Technology Data Exchange (ETDEWEB)

    Kuvnjak, Z.; Kosaric, N.; Hayes, R.D.

    1981-01-01

    The kinetics of ethanol production by Kluyveromyces marxianus ATCC 12708 and ATCC 10606, K. cicerisporus ATCC 22295 and K. fragilis 105 were studied using raw juice of the Jerusalem artichoke in which the carbohydrates were not hydrolyzed prior to fermentation. This juice contains enough nutrients and can serve as a complete medium without additional nutrients both for growth of the yeasts and for ethanol production. Both specific ethanol productivity and specific glucose uptake rates were the highest with K. marxianus ATCC 12708 (1.68 gg-1 h-1 and 3.78 gg-1h-1, respectively). This microorganism produced an ethanol yield of 87.5% of the theoretical value in 25 hours.

  16. Kinetics of ethanol production from Jerusalem artichoke juice with some Klugveromyces species

    Energy Technology Data Exchange (ETDEWEB)

    Duvnjak, Z.; Kosaric, N.; Hayes, R.D.

    1981-01-01

    The kinetics of ethanol produce by Kluyveromyces marxianus ATCC 12708 and ATCC 10606, K. cicerisporus ATCC 22295, and K. fragilis 105 have been studied using raw juice of the Jerusalem artichoke in which the carbohydrates were not hydrolyzed prior to fermentation. The experiments revealed that this juice contains enough nutrients and can serve as a complete medium without additional nutrients both for growth of the yeasts and for ethanol production. It was found that both specific ethanol productivity and specific uptake rates were the highest with K. marxianus ATCC 12708 (1.68 g/g/hour and 3.78 g/g/hour respectively). This microorganism produced an ethanol yield of 87.5% of the theoretical value in 25 hours. (Refs. 15).

  17. Polar constituents, protection against reactive oxygen species, and nutritional value of Chinese artichoke (Stachys affinis Bunge).

    Science.gov (United States)

    Venditti, Alessandro; Frezza, Claudio; Celona, Diana; Bianco, Armandodoriano; Serafini, Mauro; Cianfaglione, Kevin; Fiorini, Dennis; Ferraro, Stefano; Maggi, Filippo; Lizzi, Anna Rita; Celenza, Giuseppe

    2017-04-15

    In the present work, we studied the chemical composition of Chinese artichoke (S. affinis tubers) by analyzing its polar constituents and its macro- and micro- nutrients. A total of nine compounds were isolated from the tuber ethanolic extract and structurally elucidated by Nuclear Magnetic Resonance (NMR) spectroscopy and mass spectrometry (MS). The marker compounds identified were oligosaccharide stachyose and the organic acid, succinic acid, as well as phenylethanoid and iridoid glycosides. The macronutrient profile was dominated by carbohydrates (36.9% dw), whereas potassium (2.36%) was the most abundant micro-nutrient. The tuber ethanolic extract was able to efficiently protect human cells (Caco-2, SHSY-5Y and K562) against t-BHP-induced oxidative damage.

  18. Jerusalem artichoke as a platform for inulin, ethanol and feed production in Canada

    Energy Technology Data Exchange (ETDEWEB)

    Anyia, A.O.; Mostafa, H.; Melnichuk, R.; Slaski, J.J. [Alberta Research Council, Vegreville, AB (Canada). Bioresource Technologies Unit

    2009-07-01

    The Alberta Research Council (ARC) is developing an extraction and fermentation process for making ethanol from Jerusalem artichoke (JA). In particular, ARC has collaborated with Olds College in developing an extraction process and an engineering process for the commercial production of inulin, ethanol, polymers and animal feed from JA tubers. Fresh JA tubers contain about 20 per cent of water soluble carbohydrates, which occur primarily in the form of inulin. Several health promoting benefits are associated with intake of inulin. High volumes of dry residual aerial biomass following tuber harvest contain 40 to 50 per cent water soluble carbohydrates that are fermentable to ethanol. Some studies have shown that under optimal climatic conditions, JA can yield more ethanol per ha than sugarcane. ARC has the exclusive North American rights to several high yielding JA cultivars. Jerusalem artichoke is not a designated food crop and has a high biomass yield for soluble sugars. This perennial crop forms tubers, has a deep root system that can be adapted to marginal lands. ARC's research involves a seed to final product technology development approach that includes new variety development, agronomy and processing. ARC applied a hot water extraction technique along with a low liquid to JA stalk ratio to achieve more than 40 per cent total water soluble carbohydrates per gram of biomass that are fermentable to ethanol without the need for weak acid or enzymatic hydrolysis. A 400 hectare plantation of JA in Alberta could produce about 1,500 tonnes of inulin and 1.5 million liters of ethanol per year in a pilot scale bio-refining plant. An economic and market analysis showed that capital investments in an inulin production plant in Alberta will be a profitable venture. ARC has estimated a 5 year Internal Rate of Return (IRR) to range from 10 to 30 per cent and payback period of 4 to 5 years depending on plant location and value of by-products. tabs., figs.

  19. Jerusalem artichoke (Helianthus tuberosus L. productivity in different Italian growing areas: a modelling approach

    Directory of Open Access Journals (Sweden)

    Mario Baldini

    2011-06-01

    Full Text Available Jerusalem artichoke is considered one of the more interesting crops for inulin production. It has been used to date for the production of low calorie sweetening syrups, dietetic food enriched with fibre, medicines and cosmetics, while more recently, interesting prospects have been opening up for energy uses. The main aspects influencing its adaptability to different pedo-climatic conditions and cropping systems were analysed by implementing CSS (Cropping System Simulator, a simulation model describing crop biomass production for this specific crop. Growth analysis experimental data of plant dry matter accumulation, obtained over two years of trials (1999-2000 in different Italian growing areas (Udine, Bologna, Bari under irrigated and rain-fed conditions, were used for the parameterisation and calibration of the model. The biomass accumulation observed and simulated under rain-fed and irrigated conditions in the different growing areas is reported for the different plant organs, with good correspondence shown between simulated and measured values as reported by the statistical indices for the model calibration, particularly for biomass of tubers and leaves. The model studied, despite a simplified description of some processes, proves to represent the maximum biomass yield of Jerusalem artichoke satisfactorily, with an adequate response to the main environmental factors causing yield and biomass production variation among the years and locations. However, further model improvements are necessary in order to better represent the relationship between phenology and translocation of the assimilates between stalk and tuber during the development phases of the plant, suggesting shorter survey intervals over this growing phase.

  20. Syneresis, rheological characteristic and sensory consistency of the artichoke sauce (Cynara scolymus L.

    Directory of Open Access Journals (Sweden)

    Francisco Mora Barandiarán

    2013-09-01

    Full Text Available The effect of the concentration of three hydrocolloids: CMC, guar gum and xanthan gum on the syneresis, rheological features and sensory consistency of the artichoke sauce (Cynara scolymus L. Imperial Star variety was studied. The syneresis was determined by the water loss by centrifugation, the rheological features of the artichoke sauce was determined using a Brookfield RVDV – III model rheometer and finally, the sensory consistency was determined by measuring the degree of satisfaction with hedonic scale of nine points. A simplex lattice design blends with centroid expanded under the response surface methodology was applied to establish the effect of the concentration of hydrocolloid on syneresis, rheological features and sensory consistency. In all treatments, the apparent viscosity decreased with shear rate demonstrating a “non Newtonian” behavior of “general plastic” type with an “n” value less than 1 and an initial shear stress. The flow behavior index “n” was in the range of 0.0856 and 0.3131 (n < 1 and the consistency index “k” in the range of 84.55 y 167.80 Pa.sn , the initial shear stress was in the range of 9,10 y 13,51 Pa and consistency sensory presented score of “like” to “like slightly”. Finally, the hydrocolloid mixture was optimized over the area of feasible formulation. With the optimal mixture, corresponding to 0.28% CMC, 0.13% guar gum and 0.59% xanthan gum is expected to obtain a 0.089% of syneresis and a rating of 6 in terms of sensory consistency.

  1. Genetic mapping and identification of QTL for earliness in the globe artichoke/cultivated cardoon complex

    Directory of Open Access Journals (Sweden)

    Portis Ezio

    2012-05-01

    Full Text Available Abstract Background The Asteraceae species Cynara cardunculus (2n = 2x = 34 includes the two fully cross-compatible domesticated taxa globe artichoke (var. scolymus L. and cultivated cardoon (var. altilis DC. As both are out-pollinators and suffer from marked inbreeding depression, linkage analysis has focussed on the use of a two way pseudo-test cross approach. Results A set of 172 microsatellite (SSR loci derived from expressed sequence tag DNA sequence were integrated into the reference C. cardunculus genetic maps, based on segregation among the F1 progeny of a cross between a globe artichoke and a cultivated cardoon. The resulting maps each detected 17 major linkage groups, corresponding to the species’ haploid chromosome number. A consensus map based on 66 co-dominant shared loci (64 SSRs and two SNPs assembled 694 loci, with a mean inter-marker spacing of 2.5 cM. When the maps were used to elucidate the pattern of inheritance of head production earliness, a key commercial trait, seven regions were shown to harbour relevant quantitative trait loci (QTL. Together, these QTL accounted for up to 74% of the overall phenotypic variance. Conclusion The newly developed consensus as well as the parental genetic maps can accelerate the process of tagging and eventually isolating the genes underlying earliness in both the domesticated C. cardunculus forms. The largest single effect mapped to the same linkage group in each parental maps, and explained about one half of the phenotypic variance, thus representing a good candidate for marker assisted selection.

  2. Effects of atorvastatin and artichoke leaf tincture on oxidative stress in hypercholesterolemic rats

    Directory of Open Access Journals (Sweden)

    Crevar-Sakač Milkica

    2016-01-01

    Full Text Available Backgroung/Aim. Since combining conventional drugs with herbal medicinal products is in current research focus and possible of great interest as therapy improvement way, the aim of this study was to determine the effects of wellestablished antiatherosclerotic drug atorvastatin (CAS number 134523-00-5 and commercially available artichoke leaf tincture (ALTINC, used as combined therapy, as well as to compare effects of these two treatments separately. Methods. Experimental animals were divided into five groups: the group I (the control group of rats fed with standard diet during 11 weeks, and the remaining 4 groups of rats (II, III, IV and V fed with standard diet during the first week and then with hypercholesterolemic diet during the next 10 weeks. The group II of rats were left without treatment, while in the groups III, IV and V were rats treated per os with atorvastatin (1.15 mg/kg body wright − b.w., ALTINC (0.1 mL/kg b.w. and their combination in same doses, respectively, for the last six weeks. Results. The cholesterol rich diet led to pronounced hyperlipidemia which could not be overcame with the therapy. However, the therapy showed positive effects on abdominal aorta wall thickness and parameters of oxidative stress (malondialdehyde − MDA, proxidative-antioxidative balance − PAB and antioxidative protection (reduced glutathione − GSH, paraoxanase 1 − PON1, superoxide dismutase − SODA SH groups, especially ALTINC was successful in oxidative status improvement. Conclusion. Separate treatments comparison showed that artichoke leaf tincture is very potent antioxidant with beneficial effects in early stages of atherosclerosis. Since atorvastatin and constituents of ALTINC probably have different mechanisms of action, simultaneous use of both therapies could be beneficial but should be further investigated since our results showed that ALTINC is less effective when used in combination with atorvastatin. [Projekat Ministarstva nauke

  3. Refined structure of desmodium yellow mottle tymovirus at 2.7 A resolution.

    Science.gov (United States)

    Larson, S B; Day, J; Canady, M A; Greenwood, A; McPherson, A

    2000-08-18

    Desmodium yellow mottle virus is a 28 nm diameter, T=3 icosahedral plant virus of the tymovirus group. Its structure has been solved to a resolution of 2.7 A using X-ray diffraction analysis based on molecular replacement and phase extension methods. The final R value was 0.151 (R(free)=0.159) for 134,454 independent reflections. The folding of the polypeptide backbone is nearly identical with that of turnip yellow mosaic virus, as is the arrangement of subunits in the virus capsid. However, a major difference in the disposition of the amino-terminal ends of the subunits was observed. In turnip yellow mosaic virus, those from the B and C subunits comprising the hexameric capsomeres formed an annulus about the interior of the capsomere, while the corresponding N termini of the pentameric capsomere A subunits were not visible at all in electron density maps. In Desmodium yellow mottle tymovirus, amino termini from the A and B subunits combine to form the annuli, thereby resulting in a much strengthened association between the two types of capsomeres and an, apparently, more stable capsid. The first 13 residues of the C subunit were invisible in electron density maps. Two ordered fragments of single-stranded RNA, seven and two nucleotides in length, were observed. The ordered water structure of the virus particle was delineated and required 95 solvent molecules per protein subunit.

  4. Effects of Cowpea mottle virus and Cucumber mosaic virus on six Soybean (Glycine max L. cultivars

    Directory of Open Access Journals (Sweden)

    Aliyu Taiye H

    2009-12-01

    Full Text Available Abstract The study was carried out to determine the comparative pathogenic response of six cultivars of soybean; TGx 1844-18E, TGx 1448-2E, TGx 1910-8F, TGx 1019-2EN, TGx 1910-8F and TGx 1876-4E to single and mixed infections with cowpea mottle virus and cucumber mosaic virus. The experiment was conducted in the screenhouse at the crop production pavilion, Faculty of Agriculture, University of Ilorin, Ilorin, Kwara state Nigeria. The results of the experiment revealed that all soybean cultivars were susceptible to single and mixed infection of the two viruses but to seemingly different extent. The single infection with cowpea mottle virus (CMeV, however, caused the most severe symptoms on the soybean cultivars. Cucumber mosaic virus (CMV alone was not as severe as the CMeV. The mixed infection of CMeV and CMV did not cause higher severity than CMeV alone indicating that there was little or no synergistic effect between the two viruses on soybean.

  5. THE SUPPLEMENTARY RELATIONS BETWEEN THE PROTEINS OF MOTTLED GRAM BEAN AND CERTAIN OTHER CEREALS

    Institute of Scientific and Technical Information of China (English)

    罗登义

    2006-01-01

    @@ It has been well understood that a mixture of vegetable and animal proteins is of higher quality than the former alone, and also there are some remarkable instances of effective supplementing between the proteins of certain cereals and certain legume seeds[1]. In practice, it is very valuable for the selection of human diets and farm-animal relations. This question is especially important in China where the protein of the average diet are mainly of vegetable origin, in which about 83 percent are derived from cereals and 11 percent from beans[2]. However, a review of the literature indicates that no work has been done on the supplementary relationships of the protein of mottled gram bean with those of other cereals. The writer purchased, therefore, from the Peiping market some cheaper cereals commonly used in China, namely, yellow corn(黄玉米), red kaoliang(红高粱),oat meal(油麦面),panicled glutinous and non-glutinous millets(黄米及糜子米); and determined the supplementary values between the proteins of mottled gram bean and these cereals. The experimental details are communicated in the present paper.

  6. Effects of artichoke (Cynara scolymus) leaf and bloom head extracts on chemically induced DNA lesions in Drosophila melanogaster

    Science.gov (United States)

    Jacociunas, Laura Vicedo; Dihl, Rafael Rodrigues; Lehmann, Mauricio; de Barros Falcão Ferraz, Alexandre; Richter, Marc François; da Silva, Juliana; de Andrade, Heloísa Helena Rodrigues

    2014-01-01

    The genotoxicity of bloom head (BHE) and leaf (LE) extracts from artichoke (Cynara scolymus L.), and their ability to modulate the mutagenicity and recombinogenicity of two alkylating agents (ethyl methanesulfonate – EMS and mitomycin C – MMC) and the intercalating agent bleomycin (BLM), were examined using the somatic mutation and recombination test (SMART) in Drosophila melanogaster. Neither the mutagenicity nor the recombinogenicity of BLM or MMC was modified by co- or post-treatment with BHE or LE. In contrast, co-treatment with BHE significantly enhanced the EMS-induced genotoxicity involving mutagenic and/or recombinant events. Co-treatment with LE did not alter the genotoxicity of EMS whereas post-treatment with the highest dose of LE significantly increased this genotoxicity. This enhancement included a synergistic increase restricted to somatic recombination. These results show that artichoke extracts promote homologous recombination in proliferative cells of D. melanogaster. PMID:24688296

  7. Influence of cooking conditions on organoleptic and health-related properties of artichokes, green beans, broccoli and carrots.

    Science.gov (United States)

    Guillén, Sofía; Mir-Bel, Jorge; Oria, Rosa; Salvador, María L

    2017-02-15

    Colour, pigments, total phenolic content and antioxidant activity were investigated in artichokes, green beans, broccoli and carrots cooked under different conditions. Domestic induction hobs with temperature control were used to evaluate the effect of boiling, sous-vide cooking and water immersion cooking at temperatures below 100°C on the properties of each vegetable. Sous-vide cooking preserved chlorophyll, carotenoids, phenolic content and antioxidant activity to a greater extent than boiling for all of the vegetables tested and retained colour better, as determined by a(∗). A reduction of only 10-15°C in the cooking temperature was enough to improve the properties of the samples cooked by water immersion, except for green beans. Artichokes and carrots suffered pronounced losses of antioxidant activity during boiling (17.0 and 9.2% retention, respectively), but the stability of this parameter significantly increased with sous-vide cooking (84.9 and 55.3% retention, respectively).

  8. Cellulosic bioethanol production from Jerusalem artichoke (Helianthus tuberosus L.) using hydrogen peroxide-acetic acid (HPAC) pretreatment.

    Science.gov (United States)

    Song, Younho; Wi, Seung Gon; Kim, Ho Myeong; Bae, Hyeun-Jong

    2016-08-01

    Jerusalem artichoke (JA) is recognized as a suitable candidate biomass crop for bioethanol production because it has a rapid growth rate and high biomass productivity. In this study, hydrogen peroxide-acetic acid (HPAC) pretreatment was used to enhance the enzymatic hydrolysis and to effectively remove the lignin of JA. With optimized enzyme doses, synergy was observed from the combination of three different enzymes (RUT-C30, pectinase, and xylanase) which provided a conversion rate was approximately 30% higher than the rate with from treatment with RUT-C30 alone. Fermentation of the JA hydrolyzates by Saccharomyces cerevisiae produced a fermentation yield of approximately 84%. Therefore, Jerusalem artichoke has potential as a bioenergy crop for bioethanol production.

  9. The content of protein and of amino acids in Jerusalem artichoke tubers (Helianthus tuberosus L. of red variety Rote Zonenkugel

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    Ewa Cieślik

    2011-12-01

    Full Text Available   Introduction. Jerusalem artichoke (Helianthus tuberosus L. is grown primarily for its edible tubers, which were first cultivated by native Americans before the arrival of the Europeans. Unlike most tubers, but in common with other members of the Asteraceae, the tubers store fructans instead of starch. Fructans are non-digestible carbohydrates considered functional food ingredients because they affect body processes in ways that result in better health and in many diseases prevention. However, the Jerusalem artichoke deserves attention not only because of the content of fructans, recent studies also indicate a high protein content, including essential amino acids. Material and methods. The aim of the work was to establish the content of protein and amino acids in Jerusalem artichoke tubers (Helianthus tuberosus L. of red variety – Rote Zonenkugel. The content of protein was estimated by Dumas method. The amino acids composition was analysed with ion-change chromatography with postcolumn derivatisation and detection of ninhydryn reaction with automatic amino acids analyser. Results. The assessed liophylisate was characterised by high protein content (6.36% in comparison to chicory (which is the main industrial source of fructans and to commonly consumed potatoes. There was shown a few times higher content of essential amino acids (also of methionine in comparison to chicory and potato. The examined essential amino acids were present in very advantagenous proportions. Conclusions. In Jerusalem artichoke tubers of Rote Zonenkugel variety of the high content of protein was established in comparison to other plant sources. The high content was found of amino acids with special stress on essential amino acids (esp. sulphur ones.  

  10. Efficient production of butyric acid from Jerusalem artichoke by immobilized Clostridium tyrobutyricum in a fibrous-bed bioreactor.

    Science.gov (United States)

    Huang, Jin; Cai, Jin; Wang, Jin; Zhu, Xiangcheng; Huang, Lei; Yang, Shang-Tian; Xu, Zhinan

    2011-02-01

    Butyric acid is an important specialty chemical with wide industrial applications. The feasible large-scale fermentation for the economical production of butyric acid requires low-cost substrate and efficient process. In the present study, butyric acid production by immobilized Clostridium tyrobutyricum was successfully performed in a fibrous-bed bioreactor using Jerusalem artichoke as the substrate. Repeated-batch fermentation was carried out to produce butyric acid with a high butyrate yield (0.44 g/g), high productivity (2.75 g/L/h) and a butyrate concentration of 27.5 g/L. Furthermore, fed-batch fermentation using sulfuric acid pretreated Jerusalem artichoke hydrolysate resulted in a high butyric acid concentration of 60.4 g/L, with the yield of 0.38 g/g and the selectivity of ∼ 85.1 (85.1g butyric acid/g acetic acid). Thus, the production of butyric acid from Jerusalem artichoke on a commercial scale could be achieved based on the system developed in this work.

  11. Conte nt of nutritive components, dietary fi bre and energy value of artichoke depending on the variety

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    Iwona Mentel

    2012-06-01

    Full Text Available Background. The artichoke (Cynara scolymus L. is a perennial plant belonging to Asteraceae family. It is less popular vegetable in Poland but very valuable from nutritive and medicinal points of view plant. Material and methods. The experiments were conducted in 2008 and 2009 on fi ve artichoke varieties: ‘Deutscher Hybrid’, ‘Emerald F1’, Green Globe’, ‘Gros Camus de Bretague’ and ‘Kerlouan’, grew in Poland, France and Austria. The experimental material was assessed for: dry mass, protein, ash, vitamin C and dietary fi ber contents and some mineral components (calcium, magnesium, phosphorus, potassium, sodium, iron, zinc levels. Also the energy value and total carbohydrates content were calculated in the vegetable. Results. Among assessed varieties, the highest contents of such components as: dry mass (total solids, carbohydrates, ash, vitamin C, sodium, potassium, magnesium, iron were found in ‘Gros Camus de Bretague’. The hearts of that artichoke had also higher energy value than others. Whereas the lowest ash, phosphorus, sodium, potassium and magnesium were noticed in ‘Kerlouan’ variety. But the highest values of dietary fi ber was observed in that variety. Conclusions. Basing on performed assessments the differences in nutritive components and dietary fi ber, between analysed vegetable varieties were found.

  12. Two spinefoot colour morphs: mottled spinefoot Siganus fuscescens and white-spotted spinefoot Siganus canaliculatus are synonyms.

    Science.gov (United States)

    Hsu, T-H; Adiputra, Y T; Burridge, C P; Gwo, J-C

    2011-11-01

    Mottled spinefoot Siganus fuscescens and white-spotted spinefoot Siganus canaliculatus are two similar species that differ subtly in colouration and morphology. Three major mtDNA clades were identified for these species, but individuals were clustered by amplified fragment length polymorphism (AFLP) according to geography rather than morphology, suggesting that the colour morphs are interbreeding.

  13. Inheritance and molecular mapping of an allele providing resistance to Cowpea mild mottle virus-like symptoms in soybean

    Science.gov (United States)

    Damage to soybean [Glycine max (L.) Merr.] from Cowpea mild mottle virus-like (CPMMV-L) symptoms (family: Betaflexiviridae, genus: Carlavirus) has been of increasing concern in Argentina, Brazil, Mexico, and Puerto Rico. Soybean cultivars and lines differing in their reaction to the virus have been ...

  14. Extractions of High Quality RNA from the Seeds of Jerusalem Artichoke and Other Plant Species with High Levels of Starch and Lipid

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    Tanupat Mornkham

    2013-04-01

    Full Text Available Jerusalem artichoke (Helianthus tuberosus L. is an important tuber crop. However, Jerusalem artichoke seeds contain high levels of starch and lipid, making the extraction of high-quality RNA extremely difficult and the gene expression analysis challenging. This study was aimed to improve existing methods for extracting total RNA from Jerusalem artichoke dry seeds and to assess the applicability of the improved method in other plant species. Five RNA extraction methods were evaluated on Jerusalem artichoke seeds and two were modified. One modified method with the significant improvement was applied to assay seeds of diverse Jerusalem artichoke accessions, sunflower, rice, maize, peanut and marigold. The effectiveness of the improved method to extract total RNA from seeds was assessed using qPCR analysis of four selected genes. The improved method of Ma and Yang (2011 yielded a maximum RNA solubility and removed most interfering substances. The improved protocol generated 29 to 41 µg RNA/30 mg fresh weight. An A260/A280 ratio of 1.79 to 2.22 showed their RNA purity. Extracted RNA was effective for downstream applications such as first-stranded cDNA synthesis, cDNA cloning and qPCR. The improved method was also effective to extract total RNA from seeds of sunflower, rice, maize and peanut that are rich in polyphenols, lipids and polysaccharides.

  15. Germinação in vitro de sementes de alcachofra In vitro artichoke seed germination

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    Cassieli F de Moraes

    2010-03-01

    Full Text Available A baixa taxa de multiplicação e alta de contaminação dos explantes são algumas das dificuldades na micropropagação da alcachofra. A germinação de sementes in vitro pode ser uma alternativa de obtenção de explantes sadios para estabelecimento de futuros cultivos in vitro. O trabalho desenvolvido no Laboratório de Biotecnologia Vegetal da UPF-FAMV teve por objetivo avaliar a germinação in vitro de sementes de alcachofra cv. Nobre, em três experimentos, testando concentrações de cloro ativo na assepsia das sementes; tratamentos do tegumento (mantido intacto, com cortes laterais ou eliminação; condições de luminosidade (claro ou escuro; e dois meios de cultura [meio MS, com concentração de sais reduzida à metade (M1 e meio MS completo(M2]. Em ambos foram adicionados 30 g L-1 de sacarose e 7 g L-1 de ágar, sendo o pH ajustado para 5,6 ± 0,1 com NaOH. Os cultivos foram realizados em câmara de crescimento. A obtenção de plântulas sadias de alcachofra em curto espaço de tempo (sete dias, para utilização como fonte de explantes é viável a partir da germinação in vitro de sementes sem o tegumento (77,5% de germinação, utilizando os meios de cultura M1 ou M2 e câmara de crescimento desprovida de luz. Nestas condições, a assepsia das sementes pode ser realizada com álcool 70% por 30 min e posterior imersão em solução contendo 2% de cloro ativo por dez minutos, antes da remoção do tegumento.Low multiplication rates and high contamination in the explants are some of the difficulties in artichoke micropropagation. In vitro seed germination may be an alternative to obtain healthy explants for use in future in vitro cultivation. This project developed at the laboratory of Universidade de Passo Fundo was established to evaluate cv. 'Nobre' artichoke seeds in vitro germination. In three experiments, active chloride concentrations on seed aseptic technique; tegument treatment (kept intact, with side cuts and

  16. Evidence for Non-Transmission of Rice Yellow Mottle Virus (RYMV through Rice Seed

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    Sy, AA.

    2004-01-01

    Full Text Available An indexing of the organs (radicle and plumule and components (husk, endosperm and embryo of rice seeds using Enzyme Linked Immunosorbent Assay (ELISA was carried out to detect Rice yellow mottle virus (RYMV and establish the exact location of the virus in the rice seed. RYMV was detected only in the husk (seed coat but not in the endosperm, plumule, radicle, nor embryo. None of the seedlings raised from the seeds expressed RYMV symptoms. No virus particle was detected by the ELISA test in the leaves of the screenhouse-reared plants obtained from seeds of infected plants. The results indicate that RYMV is apparently not transmitted through rice seed probably because the virus is seed-borne in the husk (seed coat of mature rice seeds.

  17. Classification of cucumber green mottle mosaic virus (CGMMV) infected watermelon seeds using Raman spectroscopy

    Science.gov (United States)

    Lee, Hoonsoo; Lim, Hyoun-Sub; Cho, Byoung-Kwan

    2016-05-01

    The Cucumber Green Mottle Mosaic Virus (CGMMV) is a globally distributed plant virus. CGMMV-infected plants exhibit severe mosaic symptoms, discoloration, and deformation. Therefore, rapid and early detection of CGMMV infected seeds is very important for preventing disease damage and yield losses. Raman spectroscopy was investigated in this study as a potential tool for rapid, accurate, and nondestructive detection of infected seeds. Raman spectra of healthy and infected seeds were acquired in the 400 cm-1 to 1800 cm-1 wavenumber range and an algorithm based on partial least-squares discriminant analysis was developed to classify infected and healthy seeds. The classification model's accuracies for calibration and prediction data sets were 100% and 86%, respectively. Results showed that the Raman spectroscopic technique has good potential for nondestructive detection of virus-infected seeds.

  18. [Specifics of the coat protein gene in Russian strains of the cucumber green mottle mosaic virus].

    Science.gov (United States)

    Slavokhotova, A A; Andreeva, E N; Shiian, A N; Odintsova, T I; Pukhal'skiĭ, V A

    2007-11-01

    The primary structure of the coat protein (CP) gene was examined for pathogenic strain MS-1 and vaccine strain VIROG-43M of the cucumber green mottle mosaic virus (CGMMV). In CP amino acid composition, strains MS-1 and VIROG-43M are typical representatives of CGMMV: their CPs have 98-100% homology to CPs of other tobamoviruses of the group. The CP gene has the same nucleotide composition in pathogenic MS-1 and vaccine VIROG-43M, indicating that strain attenuation is not determined by this gene. The CP amino acid sequences of the two Russian strains are fully identical to the CP sequences of two Greek strains, GR-3 and GR-5. However, the nucleotide sequences of their genes differ in 13 bp, testifying to the difference between the Russian and Greek strains.

  19. Nucleotide sequences of two Korean isolates of Cucumber green mottle mosaic virus.

    Science.gov (United States)

    Kim, Sang-Min; Lee, Jung-Myung; Yim, Kyu-Ock; Oh, Man-Ho; Park, Jin-Woo; Kim, Kook-Hyung

    2003-12-31

    The nucleotide sequences of the genomic RNAs of Cucumber green mottle mosaic virus Korean watermelon isolate (CGMMV-KW) and Korean oriental melon isolate (CGMMV-KOM) were determined and compared to the sequences of other tobamoviruses including CGMMV strains W and SH. Each CGMMV isolate had a genome of 6,424 nucleotides. Each also had 60 and 176 nucleotides of 5' and 3' untranslated regions (UTRs), respectively, and four open reading frames (ORF1-4). ORFs 1 to 4 encode proteins of 129, 186, 29, and 17.4 kDa, respectively. The nucleotide and deduced amino acid sequences of CGMMV-KOM and CGMMV-KW were more than 98.3% identical. When compared to other CGMMV strains in a phylogenetic analysis they were found to form a distinct virus clade, and were more distantly related to other tobamoviruses (23.5-56.7% identity).

  20. Characterization of siRNAs derived from cucumber green mottle mosaic virus in infected cucumber plants.

    Science.gov (United States)

    Li, Yongqiang; Deng, Congliang; Shang, Qiaoxia; Zhao, Xiaoli; Liu, Xingliang; Zhou, Qi

    2016-02-01

    Virus-derived small interfering RNAs (vsiRNAs) of cucumber green mottle mosaic virus (CGMMV), a member of the genus Tobamovirus, were characterised in cucumber plants by deep sequencing. CGMMV vsiRNAs of 21-22 nt in length predominated, suggesting that there might be a conserved mechanism of DCL2 and DCL4 involvement in the biogenesis of vsiRNAs, as well as a common RNA silencing pathway in CGMMV-infected cucumber plants. The 5'-terminal base of vsiRNAs was biased towards C/A/U, suggesting that CGMMV vsiRNAs might be loaded into diverse AGO-containing RISCs to disturb the gene expression of host plants. Possible targets for some of the vsiRNAs were also predicted.

  1. Cucumber Mosaic Virus and Chili Veinal Mottle Virus Infection on Growth and Yield Component of Chilli

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    ENDANG NURHAYATI

    2006-06-01

    Full Text Available A research was undergone to study the effect of single and double infection of Cucumber Mosaic Virus (CMV and Chili Veinal Mottle Virus (ChiVMV on the growth and yield of five chilli cultivars, i.e. Prabu, Taro, Jatilaba, Laris, and Keriting Bogor. Mechanical inoculation was conducted to transmit the virus. Infection of the virus was then confirmed with DAS-ELISA. Severe symptom was observed on plant given double infection compared to those given single infection. The rate of plant growth and the amount and weight of fruits were reduced. The type of interaction between CMV and ChiVMV on most chilli cultivar can be considered as interference and additive. Synergism interaction was only observed on cultivar Laris. Based on symptom expression and reduction on yield, it can be concluded that all chilli cultivars used in this study could not hold up the virus infection.

  2. Colorimetric detection of Cucumber green mottle mosaic virus using unmodified gold nanoparticles as colorimetric probes.

    Science.gov (United States)

    Wang, Lin; Liu, Zhanmin; Xia, Xueying; Yang, Cuiyun; Huang, Junyi; Wan, Sibao

    2017-05-01

    Cucumber green mottle mosaic virus (CGMMV)causes a severe mosaic symptom of watermelon and cucumber, and can be transmitted via infected cucumber seeds, leaves and soil. It remains a challenge to detect this virus to prevent its introduction and infection and spread in fields. For this purpose, a simple and sensitive label-free colorimetric detection method for CGMMV has been developed with unmodified gold nanoparticles (AuNPs) as colorimetric probes. The method is based on the finding that the presence of RT-PCR target products of CGMMV and species-specific probes results in color change of AuNPs from red to blue after NaCl induction. Normally, species-specific probes attach to the surface of AuNPs and thereby increasing their resistance to NaCl-induced aggregation. The concentration of sodium, probes in the reaction system and evaluation of specificity and sensitivity of a novel assay, visual detection of Cucumber green mottle mosaic virus using unmodified AuNPs has been carried out with simple preparation of samples in our study. Through this assay, as low as 30pg/μL of CGMMV RNA was thus detected visually, by the naked eye, without the need for any sophisticated, expensive instrumentation and biochemical reagents. The specificity was 100% and exhibited good reproducibility in our assays. The results note that this assay is highly species-specific, simple, low-cost, and visual for easy detection of CGMMV in plant tissues. Therefore, visual assay is a potentially useful tool for middle or small-scales corporations and entry-exit inspection and quarantine bureau to detect CGMMV in cucumber seeds or plant tissues.

  3. Research Progress of Exploitation and Utilization of Jerusalem artichoke Resources%菊芋资源开发及利用研究进展

    Institute of Scientific and Technical Information of China (English)

    郭洪涛; 郭衍银

    2011-01-01

    本文在阐述菊芋价值、菊糖特性的基础上,对菊糖提取方法、菊芋制品研究现状进行了综述,同时就菊芋资源开发和利用中存在问题和发展方向提出了几点看法.%On the basis of elaborating the value of Jerusalem artichoke and the properties of inulin, the research situation of inulin extraction methods and Jerusalem artichoke products was summarized in this paper. Meanwhile, some suggestions were put forward for the present problems and developing direction in exploitation and utilization of Jerusalem artichoke.

  4. Preparation of Inulin Powder from Jerusalem Artichoke (Helianthus tuberosus L.) Tuber.

    Science.gov (United States)

    Srinameb, Bang-orn; Nuchadomrong, Suporn; Jogloy, Sanun; Patanothai, Aran; Srijaranai, Supalax

    2015-06-01

    The complete procedure for the production of inulin powder from Jerusalem artichoke tubers (JAT) was investigated. The procedure consists of isolation of inulin from JAT, elimination of color from the inulin extract and solidification. Washed tubers were first sliced, dried in a 60 °C oven for 10 h and then milled and sieved into a powder. Inulin was isolated from the JAT powder by hot water extraction using an accelerated solvent extractor (ASE). The effects of temperature and time for the extraction were investigated. The highest extraction efficiency was obtained at the extraction temperature of 80 °C for 20 min. The color of the extract was eliminated using ion exchange process with diethylaminoethyl cellulose as the sorbent. The inulin powder was subsequently obtained by freeze drying. Inulin content and inulin profiles were monitored to evaluate the efficiencies of the complete procedure. The inulin content was indirectly determined by spectrophotometry from free and total fructose measurements using potassium iodide. The inulin profile was monitored using high performance anion exchange chromatography equipped with integrated pulse amperometric detection (HPAEC-PAD). The proposed method provided the inulin production yield of 92.5%. The present procedure is fast, simple and effective for production of inulin powder from JAT. In addition, infrared spectra and some physico-chemical properties of the obtained inulin powder were determined and compared with the standard inulin.

  5. Effect of Seawater Stress on Physiological and Biochemical Responses of Five Jerusalem Artichoke Ecotypes

    Institute of Scientific and Technical Information of China (English)

    LONG Xiao-Hua; CHI Jin-He; LIU Ling; LI Qing; LIU Zhao-Pu

    2009-01-01

    Three treatments consisting of 0%,15%,and 30% seawater were investigated to analyse the ecotypic variabilities among five populations of Jerusalem artichoke (Helianthus tuberosus) regarding their responses to seawater stress under a hydroponic culture system.Analyses were done 2,4,and 6 days after treatments.The 15% and 30% seawater treatments reduced the growth rates of roots and shoots of H.tuberosus populations.The activities of superoxide dismutase,peroxidase,and catalase majored in the leaves were stimulated under the seawater stress.The electrolyte leakage and malondialdehyde contents of the leaves were also stimulated owing to seawater stress.The contents of proline and solublesugars in the leaves increased significantly with increasing seawater concentrations.The concentrations of Na+,K+,and Cl-in the aerial parts and roots increased with an increase in the seawater concentration throughout the experimental period.There were ccotypic differences among the five populations of H.tuberosus as evidenced by the analyses of the above items in both aerial parts and roots under seawater treatment.The magnitude of the ecotypic variance components indicated that a substantial proportion of the total variation for these physiological and biochemical responses were owing to ecotype,indicating the possibility of improvement through hybridization and selection.

  6. Potential environmental impact of effluents from the artichoke (Cynara scolymus L.) byproduct ensiling process using additives.

    Science.gov (United States)

    Megías, M D; Martínez-Teruel, A; Hérnandez, M R

    1999-06-01

    Three treatments have been tested on canned artichoke byproduct after 50 days of ensilage: formic acid at 20% in doses of 2 mL. kg(-)(1) (FA), cane sugar molasses at 50 g.kg(-)(1) (M), and sodium chloride at 30 g.kg(-)(1) (SC). A fourth batch acted as a control group (C). The nutritive value, fermentation characteristics, environmental pollution effect, and total volume of effluents released have been studied. The highest nutritive value recorded was with SC silage. The use of the additives did not significantly improve the fermentation stability of the silage, but the total production of effluents in each treatment-52.7 (FA), 46.9 (M), and 55.2 (SC)-was significantly lower (P < 0.01) than that of the control group (70.1 L.Tm(-)(1)). The chemical oxygen demand (COD), 117300 mg of O(2).L(-)(1), and the conductivity, 46.4 microOmega(-)(1). cm(-)(1), were significantly higher (P < 0.01) in M and SC, respectively, than in the other group.

  7. Ethanol inhibition kinetics of Kluyveromyces marxianus grown on Jerusalem artichoke juice

    Energy Technology Data Exchange (ETDEWEB)

    Bajpai, P.; Margaritis, A.

    1982-12-01

    The kinetics of ethanol inhibition on cell growth and ethanol production by Kluyveromyces marxianus UCD (FST) 55-82 were studied during batch growth. The liquid medium contained 10% (weight/volume) inulin-type sugars derived from an extract of Jerusalem artichoke (Helianthus tuberosus) tubers, supplemented with small amounts of Tween 80, oleic acid, and corn steep liquor. Initial ethanol concentrations ranging from 0 to 80 g/liter in the liquid medium were used to study the inhibitory effect of ethanol on the following parameters: maximum specific growth rate (mu max), cell and ethanol yields, and sugar utilization. It was found that as the initial ethanol concentration increased from 0 to 80 g/liter, and maximum specific growth rate of K. marxianus cells decreased from 0.42 to 0.09/hour, whereas the ethanol and cell yields and sugar utilization remained almost constant. A simple kinetic model was used to correlate the mu max results and the rates of cell and ethanol production, and the appropriate constants were evaluated. (Refs. 22).

  8. Continuous ethanol production from Jerusalem artichoke tubers. I. Use of free cells of Kluyveromyces marxianus

    Energy Technology Data Exchange (ETDEWEB)

    Margaritis, A.; Bajpai, P.

    1982-07-01

    The continuous fermentation of Jerusalem artichoke juice to ethanol by free cells of Kluyveromyces marxianus UCD (FST) 55-82 has been studied in a continuous-stirred tank bioreactor at 35 degrees C and pH 4.6. A maximum ethanol yield of 90% of the theoretical was obtained at a dilution rate of 0.05/h. About 95% of the sugars were utilized at dilution rates lower than 0.15/h. Volumetric ethanol productivity and volumetric biomass productivity reached maximum values of 7 g EtOH/L/h and 0.6 g dry wt/L/h, respectively, at a dilution rate of 0.2h. The maintenance energy coefficient for Kluyveromyces marxianus culture was found to be 0.46 g sugar/g biomass/h. Oscillatory behavior was observed following a change in dilution rate from a previous steady state and from batch to continuous culture. Values of specific ethanol production rate and specific sugar uptake were found to increase almost linearly with the increase of the dilution rate. The maximum specific ethanol production rate and maximum specific sugar uptake rate were found to be 2.6 g ethanol/g cell/h and 7.9 sugars/g cell/h, respectively. Washout occurred at a dilution rate of 0.41/h. (Refs. 21).

  9. Continuous ethanol production from Jerusalem artichokes stalks using immobilized cells of Kluyveromyces marxianus

    Energy Technology Data Exchange (ETDEWEB)

    Bajpai, P.; Margaritis, A.

    1986-01-01

    Continuous production of ethanol from the extract of Jerusalem artichoke stalks was investigated in a packed bed bioreactor using Kluyveromyces marxianus cells immobilized in calcium alginate gel beds. Maximum conversion of the sugars to ethanol was achieved with a yield of about 98% of the theoretical. Volumetric ethanol productivities of 102 grams of ethanol per litre per hour and 92 grams ethanol per liter per hour were obtained at 87% and 90% conversion respectively for an inlet substrate concentration of 100 gram sugars per liter. The maximum specific ethanol production rate and maximum specific total sugar uptake rate of the immobilized cells were found to be 0.96 gram ethanol per gram immobilized cells per hour and 2.06 gram sugars per gram immobilized cells per hour respectively. The immobilized cell bioreactor was run continuously at a dilution rate of 2.12 per hour for 30 days which resulted in a loss of 30% of the original activity. The half life of the bioreactor was estimated to be about 56 days.

  10. Continuous ethanol production from Jerusalem artichoke tubers. II. Use of immobilized cells of Kluyveromyces marxianus

    Energy Technology Data Exchange (ETDEWEB)

    Margaritis, A.; Bajpai, P.

    1982-07-01

    Kluyveromyces marxianus UCD (FST) 55-82 cells were immobilized in Na alginate beads and used in a packed-bed bioreactor system for the continuous production of ethanol from the extract of Jerusalem artichoke tubers. Volumetric ethanol productivities of 104 and 80 g ethanol/L/h were obtained at 80 and 92% sugar utilization, respectively. The maximum volumetric ethanol productivity of the immobilized cell bioreactor system was found to be 15 times higher than that of an ordinary continuous-stirred-tank (CST) bioreactor using free cells of Kluyveromyces marxianus. The immobilized cell bioreactor system was operated continuously at a constant dilution rate of 0.66/h for 12 days resulting in only an 8% loss of the original immobilized cell activity, which corresponds to an estimated half-life of ca. 72 days. The maximum specific ethanol productivity and maximum specific sugar uptake rate of the immobilized cells were found to be 0.55 g ethanol/g biomass/h and 1.21 g sugars/g biomass/h, respectively. (Refs. 27).

  11. Conversion from long-term cultivated wheat field to Jerusalem artichoke plantation changed soil fungal communities

    Science.gov (United States)

    Zhou, Xingang; Zhang, Jianhui; Gao, Danmei; Gao, Huan; Guo, Meiyu; Li, Li; Zhao, Mengliang; Wu, Fengzhi

    2017-01-01

    Understanding soil microbial communities in agroecosystems has the potential to contribute to the improvement of agricultural productivity and sustainability. Effects of conversion from long-term wheat plantation to Jerusalem artichoke (JA) plantation on soil fungal communities were determined by amplicon sequencing of total fungal ITS regions. Quantitative PCR and PCR-denaturing gradient gel electrophoresis were also used to analyze total fungal and Trichoderma spp. ITS regions and Fusarium spp. Ef1α genes. Results showed that soil organic carbon was higher in the first cropping of JA and Olsen P was lower in the third cropping of JA. Plantation conversion changed soil total fungal and Fusarium but not Trichoderma spp. community structures and compositions. The third cropping of JA had the lowest total fungal community diversity and Fusarium spp. community abundance, but had the highest total fungal and Trichoderma spp. community abundances. The relative abundances of potential fungal pathogens of wheat were higher in the wheat field. Fungal taxa with plant growth promoting, plant pathogen or insect antagonistic potentials were enriched in the first and second cropping of JA. Overall, short-term conversion from wheat to JA plantation changed soil fungal communities, which is related to changes in soil organic carbon and Olsen P contents.

  12. Occurrence and distribution of pepper veinal mottle virus and cucumber mosaic virus in pepper in Ibadan, Nigeria

    Directory of Open Access Journals (Sweden)

    Arogundade Olawale

    2012-04-01

    Full Text Available Abstract Viral diseases constitute obstacles to pepper production in the world. In Nigeria, pepper plants are primarily affected by pepper veinal mottle virus (PVMV, Cucumber mosaic virus (CMV, Pepper leaf curl Virus (TLCV, Tobacco mosaic virus (TMV, Pepper mottle virus (PMV and a host of other viruses. The experiment was carried out with a diagnostic survey on the experimental field of the National Horticultural Research Institute, Ibadan, Nigeria and on pepper farms in six local government areas within Ibadan Oyo State, Nigeria, forty samples were collected from each of the farms. Diseased samples were obtained from the field and taken to the laboratory for indexing. In ELISA test some of the samples from the pepper farms showed positive reaction to single infection with PVMV (36.79%, CMV (22.14% while some others showed positive reaction to mixed infection of the two viruses (10% but some also negative reaction to PVMV and CMV antisera (31.07.

  13. Production of ethanol at high temperatures in the fermentation of Jerusalem artichoke juice and a simple medium by Kluyveromyces marxianus

    Energy Technology Data Exchange (ETDEWEB)

    Rosa, M.F.; Correia, I.S.; Novais, J.M.

    1987-01-01

    Temperatures as high as 36 degrees C and 40 degrees C did not negatively affect the ethanol productivity of Jerusalem artichoke (J.a.) juice batch fermentation and the final concentrations of ethanol were close to those produced at lower temperatures. At higher process temperatures (36-40 degrees C), ethanol toxicity in Kluyveromyces marxianus was less important during the fermentation of J.a. juice as compared with a simple medium. In simple medium, the heat-sticking of fermentation was observed and the percentage of unfermented sugars steeply increased from 28 degrees C up to 40 degrees C. (Refs. 13).

  14. Artichoke compound cynarin differentially affects the survival, growth and stress response of normal, immortalized and cancerous human cells

    DEFF Research Database (Denmark)

    Gezer, Ceren; Yücecan, Sevinç; Rattan, Suresh Inder Singh

    2015-01-01

    Cynarin (CYN) is the main derivative of caffeoylquinic acid, found in leaves and heads of artichoke. Potential health-beneficial effects of CYN include as being choloretic-cholesterol lowering, hepatoprotective, anti-atherosclerotic, and antioxidative. We have tested the effects of various doses...... of CYN on the proliferative potential, survival, morphology, and stress response (SR) markers haemoxygenase-1 (HO-1) and heat shock protein-70 (HSP70) in normal human skin fibroblasts (FSF-1), telomerase-immortalized mesenchymal stem cells (hTERT-MSC) and cervical cancer cells, HeLa. Effects of CYN...

  15. Variation of inulin content, inulin yield and water use efficiency for inulin yield in Jerusalem artichoke genotypes under different water regimes

    Science.gov (United States)

    The information on genotypic variation for inulin content, inulin yield and water use efficiency of inulin yield (WUEi) in response to drought is limited. This study was to investigate the genetic variability in inulin content, inulin yield and WUEi of Jerusalem artichoke (Helianthus tuberosus L.) ...

  16. Free-range pigs foraging on Jerusalem artichokes (Helianthus tuberosus L.) – Effect of feeding strategy on growth, feed conversion and animal behaviour

    DEFF Research Database (Denmark)

    Kongsted, Anne Grete; Horsted, Klaus; Hermansen, John Erik

    2013-01-01

    The nutritional contributions from free-range foraging, growth, feed conversion and behaviour were investigated in 36 growing pigs foraging on Jerusalem artichokes (JA) and fed concentrates restrictedly (30% of energy recommendations) or ad libitum. Compared to the ad libitum fed pigs, the pigs f...

  17. Isolation and mapping of a C3'H gene (CYP98A49) from globe artichoke, and its expression upon UV-C stress

    NARCIS (Netherlands)

    Moglia, A.; Comino, C.; Portis, E.; Acquadro, A.; Vos, de C.H.; Beekwilder, M.J.; Lanteri, S.

    2009-01-01

    Globe artichoke represents a natural source of phenolic compounds with dicaffeoylquinic acids along with their biosynthetic precursor chlorogenic acid (5-caffeoylquinic acid) as the predominant molecules. We report the isolation and characterization of a full-length cDNA and promoter of a globe arti

  18. Genetic resources collections of leafy vegetables (lettuce, spinach, chicory, artichoke, asparagus, lamb’s lettuce, rhubarb and rocket salad): composition and gaps

    NARCIS (Netherlands)

    Treuren, van R.; Coquin, P.; Lohwasser, U.

    2012-01-01

    Lettuce, spinach and chicory are generally considered the main leafy vegetables, while a fourth group denoted by ‘minor leafy vegetables’ includes, amongst others, rocket salad, lamb’s lettuce, asparagus, artichoke and rhubarb. Except in the case of lettuce, central crop databases of leafy vegetable

  19. In vitro callus-induction in globe artichoke (Cynara cardunculus L. var. scolymus) as a system for the production of caffeoylquinic acids

    NARCIS (Netherlands)

    Menin, B.; Moglia, A.; Comino, C.; Hakkert, J.C.; Lanteri, S.; Beekwilder, M.J.

    2013-01-01

    Globe artichoke (Cynara cardunculus L. var. scolymus) provides a rich dietary source of bio-active compounds derived from phenylpropanoid metabolism, notably caffeoylquinic acids (CQAs) and flavonoids. Micropropagation techniques have been established for this species, but in vitro cultures have not

  20. First detailed karyo-morphological analysis and molecular cytological study of leafy cardoon and globe artichoke, two multi-use Asteraceae crops

    Directory of Open Access Journals (Sweden)

    Debora Giorgi

    2016-09-01

    Full Text Available Traditionally globe artichoke and leafy cardoon have been cultivated for use as vegetables but these crops are now finding multiple new roles in applications ranging from paper production to cheese preparation and biofuel use, with interest in their functional food potential. So far, their chromosome complements have been poorly investigated and a well-defined karyotype was not available. In this paper, a detailed karyo-morphological analysis and molecular cytogenetic studies were conducted on globe artichoke (Cynara cardunculus Linnaeus, 1753 var. scolymus Fiori, 1904 and leafy cardoon (C. cardunculus Linneaus, 1753 var. altilis De Candolle, 1838. Fluorescent In Situ Hybridization In Suspension (FISHIS was applied to nuclei suspensions as a fast method for screening of labelling probes, before metaphase spread hybridization. Classic Fluorescent In Situ Hybridization (FISH on slide, using repetitive telomeric and ribosomal sequences and Simple Sequence Repeats (SSRs oligonucleotide as probes, identified homologous chromosome relationships and allowed development of molecular karyotypes for both varieties. The close phylogenetic relationship between globe artichoke and cardoon was supported by the very similar karyotypes but clear chromosomal structural variation was detected. In the light of the recent release of the globe artichoke genome sequencing, these results are relevant for future anchoring of the pseudomolecule sequence assemblies to specific chromosomes. In addition, the DNA content of the two crops has been determined by flow cytometry and a fast method for standard FISH on slide and methodological improvements for nuclei isolation are described.

  1. First detailed karyo-morphological analysis and molecular cytological study of leafy cardoon and globe artichoke, two multi-use Asteraceae crops

    Science.gov (United States)

    Giorgi, Debora; Pandozy, Gianmarco; Farina, Anna; Grosso, Valentina; Lucretti, Sergio; Gennaro, Andrea; Crinò, Paola; Saccardo, Francesco

    2016-01-01

    Abstract Traditionally globe artichoke and leafy cardoon have been cultivated for use as vegetables but these crops are now finding multiple new roles in applications ranging from paper production to cheese preparation and biofuel use, with interest in their functional food potential. So far, their chromosome complements have been poorly investigated and a well-defined karyotype was not available. In this paper, a detailed karyo-morphological analysis and molecular cytogenetic studies were conducted on globe artichoke (Cynara cardunculus Linnaeus, 1753 var. scolymus Fiori, 1904) and leafy cardoon (Cynara cardunculus Linneaus, 1753 var. altilis De Candolle, 1838). Fluorescent In Situ Hybridization In Suspension (FISHIS) was applied to nuclei suspensions as a fast method for screening of labelling probes, before metaphase spread hybridization. Classic Fluorescent In Situ Hybridization (FISH) on slide, using repetitive telomeric and ribosomal sequences and Simple Sequence Repeats (SSRs) oligonucleotide as probes, identified homologous chromosome relationships and allowed development of molecular karyotypes for both varieties. The close phylogenetic relationship between globe artichoke and cardoon was supported by the very similar karyotypes but clear chromosomal structural variation was detected. In the light of the recent release of the globe artichoke genome sequencing, these results are relevant for future anchoring of the pseudomolecule sequence assemblies to specific chromosomes. In addition, the DNA content of the two crops has been determined by flow cytometry and a fast method for standard FISH on slide and methodological improvements for nuclei isolation are described. PMID:27830052

  2. Development of an automated method for Folin-Ciocalteu total phenolic assay in artichoke extracts.

    Science.gov (United States)

    Yoo, Kil Sun; Lee, Eun Jin; Leskovar, Daniel; Patil, Bhimanagouda S

    2012-12-01

    We developed a system to run the Folin-Ciocalteu (F-C) total phenolic assay, in artichoke extract samples, which is fully automatic, consistent, and fast. The system uses 2 high performance liquid chromatography (HPLC) pumps, an autosampler, a column heater, a UV/Vis detector, and a data collection system. To test the system, a pump delivered 10-fold diluted F-C reagent solution at a rate of 0.7 mL/min, and 0.4 g/mL sodium carbonate at a rate of 2.1 mL/min. The autosampler injected 10 μL per 1.2 min, which was mixed with the F-C reagent and heated to 65 °C while it passed through the column heater. The heated reactant was mixed with sodium carbonate and color intensity was measured by the detector at 600 nm. The data collection system recorded the color intensity, and peak area of each sample was calculated as the concentration of the total phenolic content, expressed in μg/mL as either chlorogenic acid or gallic acid. This new method had superb repeatability (0.7% CV) and a high correlation with both the manual method (r(2) = 0.93) and the HPLC method (r(2) = 0.78). Ascorbic acid and quercetin showed variable antioxidant activity, but sugars did not. This method can be efficiently applied to research that needs to test many numbers of antioxidant capacity samples with speed and accuracy.

  3. Temporal and spatial Bean pod mottle virus-induced gene silencing in soybean.

    Science.gov (United States)

    Juvale, Parijat S; Hewezi, Tarek; Zhang, Chunquan; Kandoth, Pramod Kaitheri; Mitchum, Melissa G; Hill, John H; Whitham, Steven A; Baum, Thomas J

    2012-12-01

    Virus-induced gene silencing (VIGS) is a powerful reverse genetics tool in plant science. In this study, we investigated the temporal and spatial silencing patterns achieved by Bean pod mottle virus (BPMV)-based VIGS in soybean using virus constructs targeting green fluorescence protein (GFP). Silencing GFP enabled an in-depth analysis of silencing in soybean tissues over time in a transgenic line constitutively expressing GFP. We discovered evidence for variable GFP silencing based on insert orientation and targeted region in the coding sequence. A 3' sequence in reverse orientation produced the strongest silencing phenotypes. Furthermore, we documented that BPMV VIGS can achieve widespread silencing in a broad range of tissues, including leaves, stems, flowers and roots. Near-complete silencing was attained in leaves and flowers. Although weaker than in shoots, the observed gene silencing in soybean roots will also allow reverse genetics studies in this tissue. When GFP fluorescence was assayed in cross-sections of stems and leaf petioles, near-complete and uniform silencing was observed in all cell types. Silencing was observed from as early as 2 weeks post-virus inoculation in leaves to 7 weeks post-virus inoculation in flowers, suggesting that this system can induce and maintain silencing for significant durations.

  4. Evidence that whitefly-transmitted cowpea mild mottle virus belongs to the genus Carlavirus.

    Science.gov (United States)

    Naidu, R A; Gowda, S; Satyanarayana, T; Boyko, V; Reddy, A S; Dawson, W O; Reddy, D V

    1998-01-01

    Two strains of whitefly-transmitted cowpea mild mottle virus (CPMMV) causing severe (CPMMV-S) and mild (CPMMV-M) disease symptoms in peanuts were collected from two distinct agro-ecological zones in India. The host-range of these strains was restricted to Leguminosae and Chenopodiaceae, and each could be distinguished on the basis of symptoms incited in different hosts. The 3'-terminal 2500 nucleotide sequence of the genomic RNA of both the strains was 70% identical and contains five open reading frames (ORFs). The first three (P25, P12 and P7) overlap to form a triple gene block of proteins, P32 encodes the coat protein, followed by P12 protein located at the 3' end of the genome. Genome organization and pair-wise comparisons of amino acid sequences of proteins encoded by these ORFs with corresponding proteins of known carlaviruses and potexviruses suggest that CPMMV-S and CPMMV-M are closely related to viruses in the genus Carlavirus. Based on the data, it is concluded that CPMMV is a distinct species in the genus Carlavirus.

  5. Molecular variability of cowpea mild mottle virus infecting soybean in Brazil.

    Science.gov (United States)

    Zanardo, L G; Silva, F N; Lima, A T M; Milanesi, D F; Castilho-Urquiza, G P; Almeida, A M R; Zerbini, F M; Carvalho, C M

    2014-04-01

    Molecular variability was assessed for 18 isolates of cowpea mild mottle virus (CPMMV, genus Carlavirus, family Betaflexiviridae) found infecting soybean in various Brazilian states (Bahia, Goiás, Maranhão, Mato Grosso, Minas Gerais, Pará) in 2001 and 2010. A variety of symptoms was expressed in soybean cv. CD206, ranging from mild (crinkle/blistering leaves, mosaic and vein clearing) to severe (bud blight, dwarfing, leaf and stem necrosis). Recombination analysis revealed only one CPMMV isolate to be recombinant. Pairwise comparisons and phylogenetic analysis were performed for partial genomes (ORF 2 to the 3' terminus) and for each ORF individually (ORFs 2 to 6), showing the isolates to be distinct. The topology of the phylogenetic tree could be related to symptoms, but not to the year of collection or geographical origin. Additionally, the phylogenetic analysis supported the existence of two distinct strains of the virus, designated CPMMV-BR1 and CPMMV-BR2, with molecular variations between them.

  6. Short communication. First report of Eggplant mottled dwarf virus in China rose in southern Spain

    Directory of Open Access Journals (Sweden)

    G. Parrella

    2013-01-01

    Full Text Available Eggplant mottled dwarf virus (EMDV, genus Nucleorhabdovirus, family Rhabdoviridae is transmitted in nature by leafhoppers and its natural host range includes vegetable crops (eggplant, tomato, potato, pepper, ornamentals (pittosporum, honeysuckle, pelargonium and wild plants (caper, Solanum nigrum. The prevalence of infections is generally very low. EMDV has been demonstrated to be the causal agent of a vein yellowing disease of China rose (Hibiscus rosa-sinensis in southern Italy. In this work, four locations from Málaga and Granada provinces (southern Spain were surveyed in 2011 to study the prevalence of EMDV infections in China rose by serological and molecular methods. Overall, EMDV was detected in 77.3% of the samples (33 out of 45 samples tested. Mechanical transmission tests and immunoelectron microscopy confirmed the presence of EMDV. The possible causes of such a high and unexpected prevalence are discussed. The use of molecular hibridization with an EMDV specific riboprobe is proposed for early screening of vegetative propagated China rose plants to avoid dissemination of infected material.

  7. De novo generation of defective interfering-like RNAs in broad bean mottle bromovirus.

    Science.gov (United States)

    Pogany, J; Romero, J; Huang, Q; Sgro, J Y; Shang, H; Bujarski, J J

    1995-10-01

    Broad been mottle virus (BBMV) is the only member of the bromoviruses that is known to accumulate defective-interfering (DI) RNAs (Romero et al., Virology 194, 576-584, 1993). De novo generation of DI-like RNAs was demonstrated during serial passages of BBMV in broad bean using either DI RNA-free virion RNA preparations or transcribed genomic RNA inocula. As for previously described DI RNAs, all but one of the characterized de novo generated DI-like RNAs were derived by a single in-frame deletion from the RNA2 component. The sole exception was derived by two shorter in-frame deletions from RNA2. The maintenance of an open reading frame by all DI-like RNAs suggests the importance of coding capacity and/or the shortened 2a protein in the accumulation of these RNAs during infection. The deletion junction sites were between nucleotides 1152 and 2366, suggesting that the retained regions are essential for the efficient accumulation of BBMV DI-like RNAs in planta. Short regions of sequence similarity and/or complementarity were revealed at the 5' and 3' junction borders. We speculate that these regions can facilitate DI (DI-like) RNA formation. In addition to DI-like RNAs, the full-length nucleotide sequences of RNA2 components of the Type and Morocco strains of BBMV are presented.

  8. Complete nucleotide sequence of a Spanish isolate of Parietaria mottle virus infecting tomato.

    Science.gov (United States)

    Galipienso, Luis; Rubio, Luis; López, Luis; Soler, Salvador; Aramburu, José

    2009-10-01

    The genome of a Spanish isolate of Parietaria mottle virus (PMoV) obtained from tomato (strain PMoV-T) was completely sequenced. Protein motifs conserved for RNA viruses were identified: the p1 protein contained a metyltransferase domain in its N-terminal half and a triphosphatase/ helicase domain in its C-terminal half, the p2 protein contained a RNA polymerase domain; the 3a protein contained a RNA-binding domain with α-helix and β-sheet secondary structures. In addition, stem-loop structures with potential capacity of protein interactions were predicted on the untranslated terminal regions. Comparison with the other sequenced PMoV isolate showed nucleotide identities of 93, 90, and 93% for genomic RNAs 1, 2 and 3, respectively, and amino acid identities ranging from 88 to 97% for the different proteins. A cytosine deletion was detected at position 1,366 of RNA 3, involving a start codon for the coat protein (CP) gene different from the other PMoV isolate, resulting in a CP 16 amino acids shorter. Comparison of synonymous and nonsynonymous mutations revealed different selective constraints along the genome.

  9. Uncoating Mechanism of Carnation Mottle Virus Revealed by Cryo-EM Single Particle Analysis.

    Science.gov (United States)

    Wang, Chun-Yan; Zhang, Qin-Fen; Gao, Yuan-Zhu; Xie, Li; Li, Hong-Mei; Hong, Jian; Zhang, Chuan-Xi

    2015-01-01

    Genome uncoating is a prerequisite for the successful infection of plant viruses in host plants. Thus far, little is known about the genome uncoating of the Carnation mottle virus (CarMV). Here, we obtained two reconstructions of CarMV at pH7 in the presence (Ca-pH7) and absence (EDTA-pH7) of calcium ions by Cryo-EM single particle analysis, which achieved 6.4 Å and 8 Å resolutions respectively. Our results showed that chelation of the calcium ions under EDTA-pH7 resulted in reduced interaction between the subunits near the center of the asymmetric unit but not overall size change of the viral particles, which indicated that the role of the calcium ions in CarMV was not predominantly for the structural preservation. Part of the genomic RNA closest to the capsid was found to be located near the center of the asymmetric unit, which might result from the interaction between genomic RNA and Lys194 residues. Together with the electrostatic potential analysis on the inner surface of the asymmetric unit, the reduced interaction near the center of the asymmetric unit under EDTA-pH7 suggested that the genome release of CarMV might be realized through the center of the asymmetric unit.

  10. Detection and molecular characterization of Pepper mild mottle virus in Serbia

    Directory of Open Access Journals (Sweden)

    Milošević Dragana

    2015-01-01

    Full Text Available During 2009 and 2010, a survey was conducted in pepper crops to detect the possible presence of Pepper mild mottle virus (PMMoV in Serbia. A total of 239 pepper samples from 39 crops at 26 localities were collected and analyzed for the presence of PMMoV, Cucumber mosaic virus (CMV, Potato virus Y (PVY, and Alfalfa mosaic virus (AMV, using DAS-ELISA test. Although it was detected in a small percentage, PMMoV could pose a threat to pepper production in Serbia due to its rapid seed-borne spread. Presence of PMMoV was confirmed by serological and biological detection, followed by conventional reverse transcription RT-PCR, using primers specific for the RNA-dependent RNA polymerase (RdRp and the coat protein (CP genes. Molecular identification confirmed that the Serbian isolates belong to PMMoV pathotypes P1,2 which do not break the resistance gene L3. Reconstructed phylogenetic tree confirmed the allocation of the Serbian isolates together with the majority of PMMoV isolates which belong to pathotypes P1,2. This study represents the first serological and molecular characterization of PMMoV infection of pepper in Serbia, and provides important data on the population structure. The obtained data could have great influence on pepper production in Serbia as well as future pepper resistance breeding in the country. [Projekat Ministarstva nauke Republike Srbije, br. TR31030 i br. III-43001

  11. Infectivity and complete nucleotide sequence of cucumber fruit mottle mosaic virus isolate Cm cDNA.

    Science.gov (United States)

    Rhee, Sun-Ju; Hong, Jin-Sung; Lee, Gung Pyo

    2014-07-01

    Three isolates of cucumber fruit mottle mosaic virus (CFMMV) were collected from melon, cucumber, and pumpkin plants in Korea. A full-length cDNA clone of CFMMV-Cm (melon isolate) was produced and evaluated for infectivity after T7 transcription in vitro (pT7CF-Cmflc). The complete CFMMV genome sequence of the infectious clone pT7CF-Cmflc was determined. The genome of CFMMV-Cm consisted of 6,571 nucleotides and shared high nucleotide sequence identity (98.8 %) with the Israel isolate of CFMMV. Based on the infectious clone pT7CF-Cmflc, a CaMV 35S-promoter driven cDNA clone (p35SCF-Cmflc) was subsequently constructed and sequenced. Mechanical inoculation with RNA transcripts of pT7CF-Cmflc and agro-inoculation with p35SCF-Cmflc resulted in systemic infection of cucumber and melon, producing symptoms similar to those produced by CFMMV-Cm. Progeny virus in infected plants was detected by RT-PCR, western blot assay, and transmission electron microscopy.

  12. Analysis of the systemic colonization of cucumber plants by Cucumber green mottle mosaic virus.

    Science.gov (United States)

    Moreno, I M; Thompson, J R; García-Arenal, F

    2004-03-01

    Systemic movement of Cucumber green mottle mosaic virus (CGMMV) in cucumber plants was shown to be from photoassimilate source to sink, thus indicating phloem transport. Nevertheless, CGMMV was not detected by immunocytochemical procedures in the intermediary cell-sieve element complex in inoculated cotyledons, where photoassimilate loading occurs. In stem internodes, CGMMV was first localized in the companion cells of the external phloem and subsequently in all tissues except the medulla, therefore suggesting leakage of the virus from, and reloading into, the transport phloem during systemic movement. In systemically infected sink leaves, CGMMV was simultaneously detected in the xylem and phloem. Interestingly, CGMMV accumulated to high levels in the differentiating tracheids of young leaves implying that the xylem could be involved in the systemic movement of CGMMV. This possibility was tested using plants in which cell death was induced in a portion of the stem by steam treatment. At 24 degrees C, steam treatment effectively prevented the systemic movement of CGMMV, even though viral RNA was detected in washes of the xylem above the steamed internode suggesting that xylem circulation occurred. At 29 degrees C, CGMMV systemically infected steam-treated cucumber plants, indicating that CGMMV can move systemically via the xylem. Xylem transport of CGMMV was, however, less efficient than phloem transport in terms of the time required for systemic infection and the percentage of plants infected.

  13. Occurrence and molecular characterization of Cucumber green mottle mosaic virus in cucurbit crops of KPK, Pakistan

    Directory of Open Access Journals (Sweden)

    Asad Ali

    2014-12-01

    Full Text Available Field survey of the cucurbit crops revealed a high incidence of Cucumber green mottle mosaic virus (CGMMV in Khyber Pakhtunkhwa Province (KPK, Pakistan. Among the seven districts surveyed, average percent incidence of CGMMV was recorded up to 58.1% in district Nowshera, followed by 51.1% in district Charsada, 40.5% in district Swabi and 37.3% in district Mardan. In Swat and Dir districts average incidence CGMMV was recorded upto 31.2% and 29.4%, respectively. Among the different crops highest incidence in plain areas of KPK was recorded in bottle gourd (59.3% followed by 56.3% in Squash, 54.5% in Pumpkin, 45.5% in Melon, 41.7% in Cucumber and 29.9% in Sponge gourd. In Northern hilly areas highest incidence of CGMMV (52.9% was observed in pumpkin, followed by 49.6% in bottle gourd, 47.3% in squash, 45.1% in Melon 42.3% in cucumber and 41.6% in sponge gourd. Little variability was observed in the coat protein amino acid sequence identities of CGMMV Pakistan isolate, when compared with other reported isolates.

  14. Complete genome sequencing of Piper yellow mottle virus infecting black pepper, betelvine, and Indian long pepper.

    Science.gov (United States)

    Deeshma, K P; Bhat, A I

    2015-02-01

    The complete genome of the Piper yellow mottle virus (PYMoV), a Badnavirus belonging to the family Caulimoviridae, was sequenced from three naturally infected hosts namely, black pepper, betelvine, and Indian long pepper. The genome length of the three virus strains (one from each of the three host species) varied from 7,559 to 7,584 nucleotides, and all the three strains possessed four open reading frames (ORFs) I to IV that potentially encode proteins of 15.67, 17.08, 218.6, and 17.22 kDa, respectively. ORF III encodes a polyprotein consisting of viral movement protein, trimeric dUTPase, zinc finger, aspartic protease, reverse transcriptase, and RNase H whereas ORF I, II, and IV encode proteins of unknown functions. The complete genome sequences at the nucleotide level were 89-99 % identical with one available sequence of PYMoV and 39-56 % identical with other badnaviruses, indicating that all three are strains of PYMoV. Nucleotide and amino acid sequences of ORF I-IV and of the intergenic region (IR) were 80-100 % identical among PYMoV strains. Phylogenetic analysis of ORF III amino acid sequences showed the PYMoV strains forming a distinct cluster well separated from other badnaviruses. Among other badnaviruses, Fig badnavirus 1 (FBV-1) was the one most closely related to PYMoV.

  15. Structural rigidity in the capsid assembly of cowpea chlorotic mottle virus

    Science.gov (United States)

    Hespenheide, B. M.; Jacobs, D. J.; Thorpe, M. F.

    2004-11-01

    The cowpea chlorotic mottle virus (CCMV) has a protein cage, or capsid, which encloses its genetic material. The structure of the capsid consists of 180 copies of a single protein that self-assemble inside a cell to form a complete capsid with icosahedral symmetry. The icosahedral surface can be naturally divided into pentagonal and hexagonal faces, and the formation of either of these faces has been proposed to be the first step in the capsid assembly process. We have used the software FIRST to analyse the rigidity of pentameric and hexameric substructures of the complete capsid to explore the viability of certain capsid assembly pathways. FIRST uses the 3D pebble game to determine structural rigidity, and a brief description of this algorithm, as applied to body-bar networks, is given here. We find that the pentameric substructure, which corresponds to a pentagonal face on the icosahedral surface, provides the best structural properties for nucleating the capsid assembly process, consistent with experimental observations.

  16. Structural rigidity in the capsid assembly of cowpea chlorotic mottle virus

    Energy Technology Data Exchange (ETDEWEB)

    Hespenheide, B M [Department of Physics and Astronomy, Arizona State University, PO Box 871504, Tempe, AZ 85287-1504 (United States); Jacobs, D J [Department of Physics and Astronomy, California State University, 18111 Nordhoff Street, Northridge, CA 91330-8268 (United States); Thorpe, M F [Department of Physics and Astronomy, Arizona State University, PO Box 871504, Tempe, AZ 85287-1504 (United States)

    2004-11-10

    The cowpea chlorotic mottle virus (CCMV) has a protein cage, or capsid, which encloses its genetic material. The structure of the capsid consists of 180 copies of a single protein that self-assemble inside a cell to form a complete capsid with icosahedral symmetry. The icosahedral surface can be naturally divided into pentagonal and hexagonal faces, and the formation of either of these faces has been proposed to be the first step in the capsid assembly process. We have used the software FIRST to analyse the rigidity of pentameric and hexameric substructures of the complete capsid to explore the viability of certain capsid assembly pathways. FIRST uses the 3D pebble game to determine structural rigidity, and a brief description of this algorithm, as applied to body-bar networks, is given here. We find that the pentameric substructure, which corresponds to a pentagonal face on the icosahedral surface, provides the best structural properties for nucleating the capsid assembly process, consistent with experimental observations.

  17. Interspecific hybridization contributes to high genetic diversity and apparent effective population size in an endemic population of mottled ducks (Anas fulvigula maculosa)

    Science.gov (United States)

    Peters, Jeffrey L.; Sonsthagen, Sarah A.; Lavretsky, Philip; Rezsutek, Michael; Johnson, William P.; McCracken, Kevin G.

    2014-01-01

    Under drift-mutation equilibrium, genetic diversity is expected to be correlated with effective population size (Ne). Changes in population size and gene flow are two important processes that can cause populations to deviate from this expected relationship. In this study, we used DNA sequences from six independent loci to examine the influence of these processes on standing genetic diversity in endemic mottled ducks (Anas fulvigula) and geographically widespread mallards (A. platyrhynchos), two species known to hybridize. Mottled ducks have an estimated census size that is about two orders-of-magnitude smaller than that of mallards, yet these two species have similar levels of genetic diversity, especially at nuclear DNA. Coalescent analyses suggest that a population expansion in the mallard at least partly explains this discrepancy, but the mottled duck harbors higher genetic diversity and apparent N e than expected for its census size even after accounting for a population decline. Incorporating gene flow into the model, however, reduced the estimated Ne of mottled ducks to 33 % of the equilibrium Ne and yielded an estimated Ne consistent with census size. We also examined the utility of these loci to distinguish among mallards, mottled ducks, and their hybrids. Most putatively pure individuals were correctly assigned to species, but the power for detecting hybrids was low. Although hybridization with mallards potentially poses a conservation threat to mottled ducks by creating a risk of extinction by hybridization, introgression of mallard alleles has helped maintain high genetic diversity in mottled ducks and might be important for the adaptability and survival of this species.

  18. Influence of nitrogen fertilization on diazotrophic communities in the rhizosphere of the Jerusalem artichoke (Helianthus tuberosus L.).

    Science.gov (United States)

    Meng, Xianfa; Wang, Lin; Long, Xiaohua; Liu, Zhaopu; Zhang, Zhenhua; Zed, Rengel

    2012-06-01

    Diazotrophs in the soil may be influenced by plant factors as well as nitrogen (N) fertilization. In this study, we investigated potential diazotrophic communities in the rhizosphere of the Jerusalem artichoke (Helianthus tuberosus L.) supplied with differing amounts of N. The community structure of N(2)-fixing bacteria was profiled using the length heterogeneity polymerase chain reaction (LH-PCR) and terminal restriction fragment length polymorphism (T-RFLP) based on a variation in the nifH gene. Higher numbers of diazotrophs were detected by T-RFLP compared to LH-PCR. The lowest number of N(2)-fixing bacteria was observed in the rhizosphere soil with high N fertilization. T-RFLP was a better method than LH-PCR for profiling microbial diversity of diazotrophs using multidimensional scaling (MDS) and analysis of similarity (ANOSIM) of fingerprints as well as diversity measures. The supply of N fertilizer appeared to negatively influence the abundance of diazotrophs in the rhizophere of the Jerusalem artichoke.

  19. Effect of cultivar x ozone treatment interaction on the total polyphenols content and antioxidant activity of globe artichoke

    Directory of Open Access Journals (Sweden)

    Sara Lombardo

    2015-06-01

    Full Text Available Two globe artichoke cultivars (Violet de Provence and Apollo were harvested at an experimental field in Sicily, immediately washed with ozonised water and stored in: i normal atmosphere; ii ozone-enriched atmosphere for 3 days and for the last 4 days in normal atmosphere; iii ozone-enriched atmosphere for 7 days. A control (samples unwashed and stored at room temperature was also investigated. The effect of cultivar x ozone treatment interaction on water content losses, total polyphenols content and antioxidant activity was evaluated after 0, 3 and 7 days of storage. Washing with ozonised water and storage under O3- enriched atmosphere allowed higher water retention compared with the control, especially for Violet de Provence. After 3 days of storage in ozone-enriched atmosphere, on average of cultivars, the total polyphenols content and antioxidant activity increased by 11.7% and 5.5%, respectively. By contrast, after further 4 days of storage in ozonised atmosphere, Apollo and Violet de Provence displayed a significant reduction in their level of total polyphenols and aantioxidant activity. The exposure of globe artichoke heads to an ozone-enriched atmosphere should not exceed 3 days aimed at preserving their high nutritional value, with special emphasis on total polyphenols content.

  20. Comparison of some biochemical properties of artichoke polyphenol oxidase entrapped in alginate-carrageenan and alginate gels.

    Science.gov (United States)

    Yagar, Hulya; Kocaturk, Selin

    2014-08-01

    Polyphenol oxidase (PPO, EC.1.14.18.1) isolated from artichoke (Cynara scolymus) was entrapped within alginate and alginate+ carrageenan beads, and the catecholase and cresolase activities of both entrapped enzymes were determined. Some properties of these immobilized enzymes such as optimum pH and temperature, kinetic parameters (Km and Vmax), thermal, and storage stability were determined and compared to each other. The highest catecholase activity was observed in alginate gel (370 U/g bead) while the highest cresolase activity was in alginate+ carrageenan gel (90 U/g bead). For catecholase and cresolase activities, optimum pHs of alginate and alginate+ carrageenan beads were determined to be 7.0 and 4.0, respectively. Optimum temperatures for catecholase activity were determined to be 40°C for both entrapped enzymes. These values for cresolase activity were 30°C and 20°C, respectively. Immobilized artichoke PPOs greatly preserved their thermal stability which exists anyway. The catalytic efficiency value (Vmax/Km) of the alginate beads is approximately high as two-and-a-half folds of that of alginate+κ-carrageenan beads for cresolase activity. These values were very close for catecholase activity. Immobilized beads saved their both activities after 30 days of storage at 4°C.

  1. Preparative separation of polyphenols from artichoke by polyamide column chromatography and high-speed counter-current chromatography

    Energy Technology Data Exchange (ETDEWEB)

    Shu, Xikai; Wang, Mei; Liu, Daicheng [College of Life Science, Shandong Normal University, Jinan, Shandong (China); Wang, Daijie; Lin, Xiaojing; Liu, Jianhua; Wang, Xiao; Huang, Luqi, E-mail: wxjn1998@126.com [Shandong Analysis and Test Center, Shandong Academy of Sciences, Jinan, Shandong (China)

    2013-09-01

    An efficient method for the rapid separation and purification of polyphenols from artichoke by polyamide column chromatography in combination with high-speed counter-current chromatography (HSCCC) was successfully built. The crude ethanol extracts from dry artichoke were first pre-separated by polyamide column chromatography and divided in two parts as sample 1 and sample 2. Then, the samples were further separated by HSCCC and yielded 7.8 mg of chlorogenic acid (compound I), 24.5 mg of luteolin-7-O-{beta}-D-rutinoside (compound II), 18.4 mg of luteolin-7-O-{beta}-D-glucoside (compound III), and 33.4 mg of cynarin (compound IV) with purity levels of 92.0%, 98.2%, 98.5%, and 98.0%, respectively, as determined by high-performance liquid chromatography (HPLC) method. The chemical structures of these compounds were identified by electrospray ionization-mass spectrometry (ESI-MS) and nuclear magnetic resonance (NMR). (author)

  2. Critical Analysis of Mottling and its Impact on Various Grades of Paper Substrates Printed under Conventional Sheet Fed Offset, Dry Toner & Liquid Toner Based Digital Print Engines

    Directory of Open Access Journals (Sweden)

    Rajendrakumar Anayath

    2016-03-01

    Full Text Available Mottle is one of the print quality factors which highly affect the final print in any printing system. Print mottle is without doubt one of the most important factors regarding visual impression of print quality in any printing system. It is usually the result of uneven ink layer or non-uniform ink absorption across the paper surface and it is more prominently visible in middle tone images or areas of uniform colour such as solids and continuous tone screen images. A mottled picture highly makes the picture smudgy and in most of the cases is not acceptable to the end user. It is required to print photographs with high sharpness and consistently from the very first print to the last print. Mottle pictures can also be observed visually and hence it needs utmost care and attention for enhancing the final print quality. Various types of mottles are generally resulted from the surface characteristics of the substrate, the setting and operation of the printing machines, and the behavior & characteristics of the printing ink.

  3. Effect of watermelon silver mottle virus on the life history and feeding preference of Thrips palmi.

    Science.gov (United States)

    Chen, Wei-Te; Tseng, Chien-Hao; Tsai, Chi-Wei

    2014-01-01

    Thrips-borne tospoviruses cause numerous plant diseases that produce severe economic losses worldwide. In the disease system, thrips not only damage plants through feeding but also transmit causative agents of epidemics. In addition, thrips are infected with tospoviruses in the course of virus transmission. Most studies on the effect of tospoviruses on vector thrips have focused on the Tomato spotted wilt virus-Frankliniella occidentalis system. Thus, we focused on another thrips-borne tospovirus, Watermelon silver mottle virus (WSMoV), to examine the effect of virus infection on its vector, Thrips palmi. In this study, the direct and indirect effects of WSMoV on the life history traits and feeding preference of T. palmi were examined. The survival rate and developmental time of the WSMoV-infected larval thrips did not differ significantly from those of the virus-free thrips. Comparing the developmental time of larval thrips fed on the healthy plants, thrips-damaged plants, and thrips-inoculated plants (the WSMoV-infected plants caused by thrips feeding), feeding on the thrips-damaged plants reduced the developmental time, and the WSMoV infection in host plants partially canceled the effect of thrips damage on the developmental time. In addition, no significant variations between the virus-free and WSMoV-infected adult thrips regarding longevity and fecundity were observed. These results implied that WSMoV did not directly affect the life history traits of T. palmi, but the WSMoV infection indirectly affected the development of T. palmi through the virus-infected plants. Furthermore, feeding preference tests indicated that T. palmi preferred feeding on either the thrips-damaged plants or the thrips-inoculated plants to the healthy plants. The effect of tospoviruses on the life history and feeding preference of vector thrips might vary among host plants, virus species, vector species, and environmental factors.

  4. Bean pod mottle virus: a new powerful tool for functional genomics studies in Pisum sativum.

    Science.gov (United States)

    Meziadi, Chouaib; Blanchet, Sophie; Richard, Manon M S; Pilet-Nayel, Marie-Laure; Geffroy, Valérie; Pflieger, Stéphanie

    2016-08-01

    Pea (Pisum sativum L.) is an important legume worldwide. The importance of pea in arable rotations and nutritional value for both human and animal consumption have fostered sustained production and different studies to improve agronomic traits of interest. Moreover, complete sequencing of the pea genome is currently underway and will lead to the identification of a large number of genes potentially associated with important agronomic traits. Because stable genetic transformation is laborious for pea, virus-induced gene silencing (VIGS) appears as a powerful alternative technology for determining the function of unknown genes. In this work, we present a rapid and efficient viral inoculation method using DNA infectious plasmids of Bean pod mottle virus (BPMV)-derived VIGS vector. Six pea genotypes with important genes controlling biotic and/or abiotic stresses were found susceptible to BPMV carrying a GFP reporter gene and showed fluorescence in both shoots and roots. In a second step, we investigated 37 additional pea genotypes and found that 30 were susceptible to BPMV and only 7 were resistant. The capacity of BPMV to induce silencing of endogenes was investigated in the most susceptible genotype using two visual reporter genes: PsPDS and PsKORRIGAN1 (PsKOR1) encoding PHYTOENE DESATURASE and a 1,4-β-D-glucanase, respectively. The features of the 'one-step' BPMV-derived VIGS vector include (i) the ease of rub-inoculation, without any need for biolistic or agro-inoculation procedures, (ii) simple cost-effective procedure and (iii) noninterference of viral symptoms with silencing. These features make BPMV the most adapted VIGS vector in pea to make low- to high-throughput VIGS studies.

  5. The giant mottled eel, Anguilla marmorata, uses blue-shifted rod photoreceptors during upstream migration.

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    Feng-Yu Wang

    Full Text Available Catadromous fishes migrate between ocean and freshwater during particular phases of their life cycle. The dramatic environmental changes shape their physiological features, e.g. visual sensitivity, olfactory ability, and salinity tolerance. Anguilla marmorata, a catadromous eel, migrates upstream on dark nights, following the lunar cycle. Such behavior may be correlated with ontogenetic changes in sensory systems. Therefore, this study was designed to identify changes in spectral sensitivity and opsin gene expression of A. marmorata during upstream migration. Microspectrophotometry analysis revealed that the tropical eel possesses a duplex retina with rod and cone photoreceptors. The λmax of rod cells are 493, 489, and 489 nm in glass, yellow, and wild eels, while those of cone cells are 508, and 517 nm in yellow, and wild eels, respectively. Unlike European and American eels, Asian eels exhibited a blue-shifted pattern of rod photoreceptors during upstream migration. Quantitative gene expression analyses of four cloned opsin genes (Rh1f, Rh1d, Rh2, and SWS2 revealed that Rh1f expression is dominant at all three stages, while Rh1d is expressed only in older yellow eel. Furthermore, sequence comparison and protein modeling studies implied that a blue shift in Rh1d opsin may be induced by two known (N83, S292 and four putative (S124, V189, V286, I290 tuning sites adjacent to the retinal binding sites. Finally, expression of blue-shifted Rh1d opsin resulted in a spectral shift in rod photoreceptors. Our observations indicate that the giant mottled eel is color-blind, and its blue-shifted scotopic vision may influence its upstream migration behavior and habitat choice.

  6. Study on the Molecular Variation and PCR Detection of Strawberry mottle virus

    Institute of Scientific and Technical Information of China (English)

    YANG Hong-yi; LI Li-li; DAI Hong-yan; ZHANG Zhi-hong

    2009-01-01

    Strawberry mottle virus (SMoV) is an important viral pathogen infecting strawberry (Fragaria spp.). The study was conducted to analyze the characterization of the molecular variation of SMoV and develop the methods for detection of SMoV by nested PCR and transcriptional enhancement techniques. The 3' non-coding region (NCR) and large coat protein (LCP) gene of SMoV genome were amplified by reverse transcription-polymerase chain reaction (RT-PCR). The specific segments were cloned and sequenced. The characterization of the molecular variation for some isolates of SMoV and phylogenetic analysis were studied. Based on the primers located in the conserved region of genome of SMoV, SMoV could be steadily detected using semi-nested PCR and transcriptional enhancement techniques. Both semi-nested PCR and transcriptional enhancement techniques were considerably more sensitive than the standard RT-PCR. The nucleotide sequences of NCR and partial LCP gene of Chinese isolates were obtained, and sequence analysis of the partial LCP gene of various SMoV isolates showed nucleotide identities ranging from 76.8 to 99.7%. There was a slight tendency for isolates to group according to their geographical origin. All 3 Polish isolates, 4 isolates of 7 Dutch isolates, and 3 isolates of 4 Chinese isolates formed a small separate branch, respectively. Two Germanic isolates had a far relationship with other isolates, and formed a separate clade. A high level of sequence variability was found among SMoV isolates, and the Germanic isolates were likely to a special strain group.

  7. Monoclonal antibody-based serological methods for detection of Cucumber green mottle mosaic virus

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    Qian Yajuan

    2011-05-01

    Full Text Available Abstract Background Cucumber green mottle mosaic virus (CGMMV, a member of the genus Tobamovirus, can be transmitted by seeds and infects many cucurbit species, causing serious yield losses in cucumber and watermelon plants. In this paper, five serological methods including antigen-coated plate enzyme-linked immunosorbent assay (ACP-ELISA, triple antibody sandwich enzyme-linked immunosorbent assay (TAS-ELISA, Dot-immunobinding assay (DBIA, direct tissue blot immunoassay (DTBIA and immunocapture reverse transcriptase polymerase chain reaction (IC-RT-PCR were described for detection and diagnosis of CGMMV. Results Using the purified CGMMV particles as immunogens, six murine monoclonal antibodies (MAbs were produced. Five serological methods were established using the MAb 4H1 and detection sensitivity was compared using purified preparations and infected-plant tissue extracts. The detection sensitivity of ACP-ELISA was 0.16 ng of purified CGMMV, whereas TAS-ELISA was more sensitive than ACP-ELISA with a minimum detection of 0.04 ng of purified CGMMV. The sensitivities of TAS-ELISA and DBIA were similar for detecting CGMMV in infected-plant tissue extracts, and were four times higher than ACP-ELISA. The IC-RT-PCR was the most sensitive method, which could detect as little as 0.1 pg of purified virus. The detection sensitivity of IC-RT-PCR for CGMMV-infected plant tissues was about 400 times higher than that of TAS-ELISA and DBIA. Conclusions The established ACP-ELISA, TAS-ELISA, DBIA and DTBIA are suitable for routine CGMMV detection of large-scale samples in the field survey, while IC-RT-PCR is more sensitive and suitable for acquiring information about the viral genome.

  8. Genetic variation and population structure of Cucumber green mottle mosaic virus.

    Science.gov (United States)

    Rao, Li-Xia; Guo, Yushuang; Zhang, Li-Li; Zhou, Xue-Ping; Hong, Jian; Wu, Jian-Xiang

    2017-01-04

    Cucumber green mottle mosaic virus (CGMMV) is a single-stranded, positive sense RNA virus infecting cucurbitaceous plants. In recent years, CGMMV has become an important pathogen of cucurbitaceous crops including watermelon, pumpkin, cucumber and bottle gourd in China, causing serious losses to their production. In this study, we surveyed CGMMV infection in various cucurbitaceous crops grown in Zhejiang Province and in several seed lots purchased from local stores with the dot enzyme-linked immunosorbent assay (dot-ELISA), using a CGMMV specific monoclonal antibody. Seven CGMMV isolates obtained from watermelon, grafted watermelon or oriental melon samples were cloned and sequenced. Identity analysis showed that the nucleotide identities of the seven complete genome sequences ranged from 99.2 to 100%. Phylogenetic analysis of seven CGMMV isolates as well as 24 other CGMMV isolates from the GenBank database showed that all CGMMV isolates could be grouped into two distinct monophyletic clades according to geographic distribution, i.e. Asian isolates for subtype I and European isolates for subtype II, indicating that population diversification of CGMMV isolates may be affected by geographical distribution. Site variation rate analysis of CGMMV found that the overall variation rate was below 8% and mainly ranged from 2 to 5%, indicating that the CGMMV genomic sequence was conservative. Base substitution type analysis of CGMMV showed a mutational bias, with more transitions (A↔G and C↔T) than transversions (A↔C, A↔T, G↔C and G↔T). Most of the variation occurring in the CGMMV genome resulted in non-synonymous substitutions, and the variation rate of some sites was higher than 30% because of this mutational bias. Selection constraint analysis of CGMMV ORFs showed strong negative selection acting on the replication-associated protein, similar to what occurs for other plant RNA viruses. Finally, potential recombination analysis identified isolate Ec as a

  9. Rice Yellow Mottle Virus stress responsive genes from susceptible and tolerant rice genotypes

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    Siré Christelle

    2008-03-01

    Full Text Available Abstract Background The effects of viral infection involve concomitant plant gene variations and cellular changes. A simple system is required to assess the complexity of host responses to viral infection. The genome of the Rice yellow mottle virus (RYMV is a single-stranded RNA with a simple organisation. It is the most well-known monocotyledon virus model. Several studies on its biology, structure and phylogeography have provided a suitable background for further genetic studies. 12 rice chromosome sequences are now available and provide strong support for genomic studies, particularly physical mapping and gene identification. Results The present data, obtained through the cDNA-AFLP technique, demonstrate differential responses to RYMV of two different rice cultivars, i.e. susceptible IR64 (Oryza sativa indica, and partially resistant Azucena (O. s. japonica. This RNA profiling provides a new original dataset that will enable us to gain greater insight into the RYMV/rice interaction and the specificity of the host response. Using the SIM4 subroutine, we took the intron/exon structure of the gene into account and mapped 281 RYMV stress responsive (RSR transcripts on 12 rice chromosomes corresponding to 234 RSR genes. We also mapped previously identified deregulated proteins and genes involved in partial resistance and thus constructed the first global physical map of the RYMV/rice interaction. RSR transcripts on rice chromosomes 4 and 10 were found to be not randomly distributed. Seven genes were identified in the susceptible and partially resistant cultivars, and transcripts were colocalized for these seven genes in both cultivars. During virus infection, many concomitant plant gene expression changes may be associated with host changes caused by the infection process, general stress or defence responses. We noted that some genes (e.g. ABC transporters were regulated throughout the kinetics of infection and differentiated susceptible and

  10. The 3.2 Angstrom Resolution Structure of the Polymorphic Cowpea Chlorotic Mottle Virus Ribonucleoprotein Particle

    Science.gov (United States)

    Speir, Jeffrey Alan

    Structural studies of the polymorphic cowpea chlorotic mottle virus have resulted in high resolution structures for two distinct icosahedral ribonucleoprotein particle conformations dependent upon whether acidic or basic pH conditions prevail. CCMV is stable below pH 6.5, however metal-free particles maintain a 10% increase in hydrodynamic volume at pH >=q 7.5. Identification of this swollen' form of CCMV, which can easily be disrupted with 1M NaCl, led to the first reassembly of an icosahedral virus in vitro from purified viral protein and RNA to form infectious particles, and its assembly has been the subject of biochemical and biophysical investigations for over twenty-five years. Under well defined conditions of pH, ionic strength and divalent metal ion concentration, CCMV capsid protein or capsid protein and RNA will reassemble to form icosahedral particles of various sizes, sheets, tubes, rosettes, and a variety of laminar structures which resemble virion structures from non-related virus families. Analysis of native particles at 3.2A resolution and swollen particles at 28A resolution has suggested that the chemical basis for the formation of polymorphic icosahedral and anisometric structures is: (i) hexamers formed of beta-barrel subunits stabilized by an unusual hexameric parallel beta structure made up of their N-termini, (ii) the location of protein-RNA interactions, (iii) divalent metal cation binding sites that regulate quasi-symmetrical subunit associations, (iv) charge repulsion across the same interfaces when lacking divalent metal ions at basic pH, which induces the formation of sixty 20A diameter portals for RNA release, and (v) a novel, C-terminal-based, subunit dimer assembly unit. The use of C- and N-terminal arms in CCMV has not been observed in other icosahedral RNA virus structures determined at near atomic resolution, however, their detailed interactions and roles in stabilizing the quaternary organization of CCMV are related to that found

  11. Action of two alkalating agents, ethyl methyl sulfonate and nitrogenous mustard, on Jerusalem artichoke tissues cultivated in vitro. Protection of these tissues by cysteamin and restoration by kinetin

    Energy Technology Data Exchange (ETDEWEB)

    Jonard, R.

    1968-01-01

    Methane methyl sulfonate and nitrogenous mustard cause an inhibition of the proliferation of the Jerusalem artichoke tissues grown in vitro. The cysteamin which protects those tissues from the effect of X-rays, acts in a protective way solely as regards the toxic effect of nitrogenous mustard. Kinetin, which is an efficient radiorestorer for those tissues, brings back a proliferation of the samples subjected to the effect of nitrogenous mustard. 13 references, 2 tables.

  12. Citric acid production from extract of Jerusalem artichoke tubers by the genetically engineered yeast Yarrowia lipolytica strain 30 and purification of citric acid.

    Science.gov (United States)

    Wang, Ling-Fei; Wang, Zhi-Peng; Liu, Xiao-Yan; Chi, Zhen-Ming

    2013-11-01

    In this study, citric acid production from extract of Jerusalem artichoke tubers by the genetically engineered yeast Yarrowia lipolytica strain 30 was investigated. After the compositions of the extract of Jerusalem artichoke tubers for citric acid production were optimized, the results showed that natural components of extract of Jerusalem artichoke tubers without addition of any other components were suitable for citric acid production by the yeast strain. During 10 L fermentation using the extract containing 84.3 g L(-1) total sugars, 68.3 g L(-1) citric acid was produced and the yield of citric acid was 0.91 g g(-1) within 336 h. At the end of the fermentation, 9.2 g L(-1) of residual total sugar and 2.1 g L(-1) of reducing sugar were left in the fermented medium. At the same time, citric acid in the supernatant of the culture was purified. It was found that 67.2 % of the citric acid in the supernatant of the culture was recovered and purity of citric acid in the crystal was 96 %.

  13. Seed transmission rates of Bean pod mottle virus and Soybean mosaic virus in soybean may be affected by mixed infection or expression of the Kunitz trypsin inhibitor

    Science.gov (United States)

    To facilitate their spread, plant viruses have developed several methods for dispersal including insect and seed transmission. While insect transmission requires virus stability against insect digestion, seed-transmitted viruses have to overcome barriers to entry into embryos. Bean pod mottle virus ...

  14. Separation and quantification of inulin in selected artichoke (Cynara scolymus L.) cultivars and dandelion (Taraxacum officinale WEB. ex WIGG.) roots by high-performance anion exchange chromatography with pulsed amperometric detection.

    Science.gov (United States)

    Schütz, Katrin; Muks, Erna; Carle, Reinhold; Schieber, Andreas

    2006-12-01

    The profile of fructooligosaccharides and fructopolysaccharides in artichoke heads and dandelion roots was investigated. For this purpose, a suitable method for high-performance anion exchange chromatography with pulsed amperometic detection was developed. The separation of monomers, oligomers and polymers up to a chain length of 79 sugar residues was achieved in one single run. Glucose, fructose, sucrose and individual fructooligosaccharides (kestose, nystose, fructofuranosylnystose) were quantified in six different artichoke cultivars and in dandelion roots. The contents ranged from 12.9 g/kg DM to 71.7 g/kg DM for glucose, from 15.8 g/kg DM to 67.2 g/kg DM for fructose, and from 16.8 g/kg DM to 55.2 g/kg DM for sucrose in the artichoke heads. Kestose was the predominant fructooligosaccharide, followed by nystose and fructofuranosylnystose. In four cultivars fructofuranosylnystose was only detectable in traces and reached its maximum value of 3.6 g/kg DM in the cultivar Le Castel. Furthermore, an average degree of polymerization of 5.3 to 16.7 was calculated for the individual artichoke cultivars, which is noticeably lower than hitherto reported. In contrast, the contents of kestose, nystose and fructofuranosylnystose in dandelion root exceeded that of artichoke, reflecting the short chain characteristic of the inulin, which was confirmed by chromatographic analysis.

  15. Biofortified red mottled beans (Phaseolus vulgaris L. in a maize and bean diet provide more bioavailable iron than standard red mottled beans: Studies in poultry (Gallus gallus and an in vitro digestion/Caco-2 model

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    Glahn Raymond P

    2011-10-01

    Full Text Available Abstract Background Our objective was to compare the capacities of biofortified and standard colored beans to deliver iron (Fe for hemoglobin synthesis. Two isolines of large-seeded, red mottled Andean beans (Phaseolus vulgaris L., one standard ("Low Fe" and the other biofortified ("High Fe" in Fe (49 and 71 μg Fe/g, respectively were used. This commercial class of red mottled beans is the preferred varietal type for most of the Caribbean and Eastern and Southern Africa where almost three quarters of a million hectares are grown. Therefore it is important to know the affect of biofortification of these beans on diets that simulate human feeding studies. Methods Maize-based diets containing the beans were formulated to meet the nutrient requirements for broiler except for Fe (Fe concentrations in the 2 diets were 42.9 ± 1.2 and 54.6 ± 0.9 mg/kg. One day old chicks (Gallus gallus were allocated to the experimental diets (n = 12. For 4 wk, hemoglobin, feed-consumption and body-weights were measured. Results Hemoglobin maintenance efficiencies (HME (means ± SEM were different between groups on days 14 and 21 of the experiment (P In-vitro analysis showed lower iron bioavailability in cells exposed to standard ("Low Fe" bean based diet. Conclusions We conclude that the in-vivo results support the in-vitro observations; biofortified colored beans contain more bioavailable-iron than standard colored beans. In addition, biofortified beans seems to be a promising vehicle for increasing intakes of bioavailable Fe in human populations that consume these beans as a dietary staple. This justifies further work on the large-seeded Andean beans which are the staple of a large-region of Africa where iron-deficiency anemia is a primary cause of infant death and poor health status.

  16. [Phylogenetic and Bioinformatics Analysis of Replicase Gene Sequence of Cucumber Green Mottle Mosaic Virus].

    Science.gov (United States)

    Liang, Chaoqiong; Meng, Yan; Luo, Laixin; Liu, Pengfei; Li, Jianqiang

    2015-11-01

    The replicase genes of five isolates of Cucumber green mottle mosaic virus from Jiangsu, Zhejiang, Hunan and Beijing were amplificated, sequenced and analyzed. The similarities of nucleotide acid sequences indicated that 129 kD and 57 kD replicase genes of CGMMV-No. 1, CGMMV-No. 2, CGMMV-No. 3, CGMMV-No. 4 and CGMMV-No. 5 were 99.64% and 99.74%, respectively. The similarities of 129 kD and 57 kD replicase genes of CGMMV-No. 1, CGMMV-No. 3 and CGMMV-No. 4 were 99.95% and 99.94%, while they were lower between CGMMV-No. 2 and the rest of four reference sequences, just from 99.16% to 99.27% and from 99.04% to 99.18%. All reference sequences could be divided into six groups in neighbor-joining (NJ) phylogenetic trees based on the replicase gene sequences of 129 kD, 57 kD protein respectively. CGMMV-No. 1, CGMMV-No. 3 and CGMMV-No. 4 were clustered together with Shandong isolate (Accession No. KJ754195) in two NJ trees; CGMMV-No. 5 was clustered together with Liaoning isolate (Accession No. EF611826) in two NJ trees; CGMMV-No. 2 was clustered together with Korea watermelon isolate (Accession No. AF417242) in phylogenetic tree of 129 kD replicase gene of CGMMV; Interestingly, CGMMV-No. 2 was classified as a independent group in phylogenetic tree of 57 kD replicase gene of CGMMV. There were no significant hydrophobic and highly coiled coil regions on 129 kD and 57 kD proteins of tested CGMMV isolates. Except 129 kD protein of CGMMV-No. 4, the rest were unstable protein. The number of transmembrane helical segments (TMHs) of 129 kD protein of CGMMV-No. 1, CGMMV-No. 2, CGMMV-No. 3 and CGMMV-No. 5 were 6, 6, 2 and 4, respectively, which were 13, 13 and 5 on the 57 kD protein of CGMMV-No. 2, CGMMV-No. 4 and CGMMV-No. 5. The glycosylation site of 129 kD protein of tested CGMMV isolates were 2, 4, 4, 4 and 4, and that of 57 kD protein were 2, 5, 2, 5 and 2. There were difference between the disorders, globulins, phosphorylation sites and B cell antigen epitopes of 129 kD and 57

  17. Full-length sequence analysis of a distinct isolate of Bidens mottle virus infecting sunflower in Taiwan.

    Science.gov (United States)

    Liao, J Y; Hu, Chung-Chi; Chen, C C; Chang, C H; Deng, T C

    2009-01-01

    The full-length genome of a potyvirus, previously known as sunflower chlorotic spot virus isolate SF-1 (SCSV-SF-1) which causes novel symptoms on sunflowers (Helianthus annuus), was sequenced and analyzed. The genome of SCSV-SF-1 is 9,741 nucleotides long, encoding a polyprotein of 3,071 amino acids containing the consensus motifs of potyviruses. Sequence comparison revealed that the 3'-terminus of SCSV-SF-1 shared over 96% similarities with isolates of Bidens mottle virus (BiMoV). However, SCSV-SF-1 has a very narrow host range, excluding the diagnostic host species for BiMoV, Bidens pilosa and Zinnia elegans. Therefore, SCSV-SF-1 is a distinct isolate of BiMoV. This is the first report of the full-length nucleotide sequence of BiMoV infecting sunflower in Taiwan.

  18. Identification of Carnation Mottle Viruson Carnation in Kunming%昆明香石竹斑驳病毒鉴定

    Institute of Scientific and Technical Information of China (English)

    蔡红; 孔宝华; 吴建宇; 陈海如; 段永嘉

    2001-01-01

    从表现为叶斑驳、花碎色症状的香石竹病株上获得一病毒分离物,经电镜负染观察,该病毒为直径是28~33nm的球状粒子,病毒提取液经紫外光测定呈典型核蛋白吸收曲线,OD260/OD280=1.70;血清学反应与CarMV抗血清出现明显的沉淀线.由此,可基本认为该病毒分离物为香石竹斑驳病毒(Carnation mottle virus, CarMV).

  19. Insight into the three-dimensional structure of maize chlorotic mottle virus revealed by Cryo-EM single particle analysis.

    Science.gov (United States)

    Wang, Chun-Yan; Zhang, Qin-Fen; Gao, Yuan-Zhu; Zhou, Xue-Ping; Ji, Gang; Huang, Xiao-Jun; Hong, Jian; Zhang, Chuan-Xi

    2015-11-01

    Maize chlorotic mottle virus (MCMV) is the only member of the Machlomovirus genus in the family Tombusviridae. Here, we obtained the Cryo-EM structure of MCMV by single particle analysis with most local resolution at approximately 4 Å. The Cα backbone was built based on residues with bulky side chains. The resolved C-terminus of the capsid protein subunit and obvious openings at the 2-fold axis demonstrated the compactness of the asymmetric unit, which indicates an important role in the stability of MCMV. The Asp116 residue from each subunit around the 5-fold and 3-fold axes contributed to the negative charges in the centers of the pentamers and hexamers, which might serve as a solid barrier against the leakage of genomic RNA. Finally, the loops most exposed on the surface were analyzed and are proposed to be potential functional sites related to MCMV transmission.

  20. Real time TaqMan RT-PCR assay for the detection of Cucumber green mottle mosaic virus.

    Science.gov (United States)

    Hongyun, Chen; Wenjun, Zhao; Qinsheng, Gu; Qing, Chen; Shiming, Lin; Shuifang, Zhu

    2008-05-01

    A real time reverse-transcription polymerase chain reaction (RT-PCR) was developed for efficient detection of Cucumber green mottle mosaic virus (CGMMV). The method was designed to use a duo-primer system with a TaqMan probe targeting the conserved sequence in 3' noncoding region (NCR) of CGMMV to detect isolates of this virus collected in China. The sensitivity of the real time RT-PCR assay was 0.13 pg of total RNA or 50 molecules of RNA transcripts. This level of sensitivity indicated that the one step real time RT-PCR developed in the present study could be used for routine testing assays. The real time RT-PCR method could assist in the implementation of quarantine measures for prevention and control of the disease caused by CGMMV.

  1. Destruction of Cucumber green mottle mosaic virus by heat treatment and rapid detection of virus inactivation by RT-PCR.

    Science.gov (United States)

    Kim, Sang-Min; Nam, Sang-Hyun; Lee, Jung-Myung; Yim, Kyu-Ock; Kim, Kook-Hyung

    2003-12-31

    Heat treatment is commonly used to control viral contamination of seeds. To study virus inactivation, virus was purified from seeds contaminated with Cucumber green mottle mosaic virus (CGMMV) after various heat treatments. CGMMV particles were observed to be physically disrupted by high temperature. Analysis of viral RNA revealed that the 5' and 3' termini of the genome were protected whereas regions between 2-2.5, 3.2-3.7 and 4-4.8 kb from the 5' terminus were not. Heat inactivation of virus on seeds was confirmed by RT-PCR using primers for a heat-sensitive region. The RT-PCR approach developed here may prove preferable to time- and labor-intensive bioassays for assessing virus heat inactivation.

  2. Optimization of microwave-assisted drying of Jerusalem artichokes (Helianthus tuberosus L. by response surface methodology and genetic algorithm

    Directory of Open Access Journals (Sweden)

    E. KARACABEY

    2016-03-01

    Full Text Available The objective of the present study was to investigate microwave-assisted drying of Jerusalem artichoke tubers to determine the effects of the processing conditions. Drying time (DT and effectivemoisture diffusivity (EMD were determined to evaluate the drying process in terms of dehydration performance, whereas the rehydration ratio (RhR was considered as a significant quality index. A pretreatment of soaking in a NaCl solution was applied before all trials. The output power of the microwave oven, slice thickness and NaCl concentration of the pretreatment solution werethe three investigated parameters. The drying process was accelerated by altering the conditions while obtaining a higher quality product. For optimization of the drying process, response surface methodology (RSM and genetic algorithms (GA were used. Model adequacy was evaluated for each corresponding mathematical expression developed for interested responses by RSM. The residual of the model obtained by GA was compared to that of the RSM model. The GA was successful in high-performance prediction and produced results similar to those of RSM. The analysis and results of the present study show that both RSM and GA models can be used in cohesion to gain insight into the bioprocessing system.

  3. Continuous production of gluconic acid and sorbitol from Jerusalem artichoke and glucose using an oxidoreductase of Zymomonas mobilis and inulinase.

    Science.gov (United States)

    Kim, D M; Kim, H S

    1992-02-01

    Gluconic acid and sorbitol were simultaneously produced from glucose and Jerusalem artichoke using a glucose-fructose oxidoreductase of Zymomonas mobilis and inulinase. Inulinase was immobilized on chitin by cross-linking with glutaraldehyde. Cells of Z. mobilis permeabilized with toluene were coimmobilized with chitin-immobilized inulinase in alginate beads. The optimum amounts of both chitin-immobilized inulinase and permeabilized cells for coimmobilization were determined, and operational conditions were optimized. In a continuous stirred tank reactor operation, the maximum productivities for gluconic acid and sorbitol were about 19.2 and 21.3 g/L/h, respectively, at the dilution rate of 0.23 h(-1) and the substrate concentration of 20%, but operational stability was low because of the abrasion of the beads. As an approach to increase the operational stability, a recycle packed-bed reactor (RPBR) was employed. In RPBR operation, the maximum productivities for gluconic acid and sorbitol were found to be 23.4 and 26.0 g/L/h, respectively, at the dilution rate of 0.35 h(-1) and the substrate concentration of 20% when the recirculation rate was fixed at 900 mL/h. Coimmobilized enzymes were stable for 250 h in a recycle packed-bed reactor without any loss of activity, while half-life in a continuous stirred tank reactor (CSTR) was observed to be about 150 h.

  4. A Two-Step Nanofiltration Process for the Production of Phenolic-Rich Fractions from Artichoke Aqueous Extracts

    Directory of Open Access Journals (Sweden)

    Alfredo Cassano

    2015-04-01

    Full Text Available Commercial nanofiltration (NF membranes in spiral-wound configuration (NP030 from Microdyn Nadir and Desal DK from GE Water & Process Technologies were used in a sequential design in order to produce a separated fraction of phenolic and sugar compounds from an aqueous artichoke extract. For both membranes, the effect of transmembrane pressure (TMP on the permeation flux was evaluated. In optimized conditions of TMP, the NP030 membrane exhibited high rejections of apigenin, cynarin and chlorogenic acid (higher than 85%; on the other hand, very low rejections of fructose, glucose and sucrose (lower than 4% were measured. Starting from an extract with a total antioxidant activity (TAA of 5.28 mM trolox a retentate fraction with a TAA of 47.75 mM trolox was obtained. The NF permeate from the NP030 membrane was processed with the Desal DK membrane in optimized conditions of TMP producing a permeate stream free of phenolic and sugar compounds. Accordingly, as most part of phenolic compounds was removed in the first NF step, the concentration of sugar compounds in the NF retentate had much higher results than that of phenolic compounds.

  5. Kinetics of ethanol production by immobilized Kluyveromyces marxianus cells at varying sugar concentrations of Jerusalem artichoke juice

    Energy Technology Data Exchange (ETDEWEB)

    Bajpai, P.; Margaritis, A.

    1987-08-01

    Kinetics of ethanol fermentation at varying sugar concentrations of Jerusalem artichoke tuber extract has been studied using Kluyveromyces marxianus cells immobilized in calcium alginate gel beads. A maximum ethanol concentration of 111 g/l was achieved at an initial sugar concentration of 260 g/l in 20 hours, when the immobilized cell concentration in the calcium alginate beads was 53.3 g dry wt./l bead volume. Ethanol yield remained almost unaffected by initial sugar concentration up to 250 g/l and was found to be about 88% of the theoretical. Maximum rate of ethanol production decreased from 22.5 g ethanol/l/h to 10.5 g ethanol/l/h while the maximum rate of total sugars utilization decreased from 74.9 g sugars/l/h to 28.5 g sugars/l/h as the initial substrate concentration was increased from 100 to 300 g/l. The concentration of free cells in the fermentation broth was low.

  6. Extraction of bioactive carbohydrates from artichoke (Cynara scolymus L.) external bracts using microwave assisted extraction and pressurized liquid extraction.

    Science.gov (United States)

    Ruiz-Aceituno, Laura; García-Sarrió, M Jesús; Alonso-Rodriguez, Belén; Ramos, Lourdes; Sanz, M Luz

    2016-04-01

    Microwave assisted extraction (MAE) and pressurized liquid extraction (PLE) methods using water as solvent have been optimized by means of a Box-Behnken and 3(2) composite experimental designs, respectively, for the effective extraction of bioactive carbohydrates (inositols and inulin) from artichoke (Cynara scolymus L.) external bracts. MAE at 60 °C for 3 min of 0.3 g of sample allowed the extraction of slightly higher concentrations of inositol than PLE at 75 °C for 26.7 min (11.6 mg/g dry sample vs. 7.6 mg/g dry sample). On the contrary, under these conditions, higher concentrations of inulin were extracted with the latter technique (185.4 mg/g vs. 96.4 mg/g dry sample), considering two successive extraction cycles for both techniques. Both methodologies can be considered appropriate for the simultaneous extraction of these bioactive carbohydrates from this particular industrial by-product. To the best of our knowledge this is the first time that these techniques are applied for this purpose.

  7. Salinity altered root distribution and increased diversity of bacterial communities in the rhizosphere soil of Jerusalem artichoke

    Science.gov (United States)

    Yang, Hui; Hu, Jinxiang; Long, Xiaohua; Liu, Zhaopu; Rengel, Zed

    2016-02-01

    The interaction between roots and bacterial communities in halophytic species is poorly understood. Here, we used Jerusalem artichoke cultivar Nanyu 1 (NY-1) to characterise root distribution patterns and determine diversity and abundance of bacteria in the rhizosphere soil under variable salinity. Root growth was not inhibited within the salinity range 1.2 to 1.9 g salt/kg, but roots were mainly confined to 0–20 cm soil layer vertically and 0–30 cm horizontally from the plant centre. Root concentrations of K+, Na+, Mg2+ and particularly Ca2+ were relatively high under salinity stress. High salinity stress decreased soil invertase and catalase activity. Using a next-generation, Illumina-based sequencing approach, we determined higher diversity of bacteria in the rhizosphere soil at high than low salinity. More than 15,500 valid reads were obtained, and Proteobacteria, Acidobacteria, Bacteroidetes and Actinobacteria predominated in all samples, accounting for >80% of the reads. On a genus level, 636 genera were common to the low and high salinity treatments at 0–5 cm and 5–10 cm depth. The abundance of Steroidobacter and Sphingomonas was significantly decreased by increasing salinity. Higher Shannon and Chao 1 indices with increasing severity of salt stress indicated that high salt stress increased diversity in the bacterial communities.

  8. EFFECTS OF ARTICHOKE (CYNARA SCOLYMUS L. EXTRACT ADDITION ON MICROBIOLOGICAL AND PHYSICO-CHEMICAL PROPERTIES OF PROBIOTIC YOGURT

    Directory of Open Access Journals (Sweden)

    Jalal Ehsani

    2015-06-01

    Full Text Available In this study, the effects of addition of artichoke (Cynara scolymus L. leaf extract into yogurt (0 or 0.5% on biochemical parameters (pH, titrable acidity and the viability of probiotic bacteria (Lactobacillus acidophilus LA-5, Bifidobacterium lactis BB-12 during fermentation and over 28 days of refrigerated storage (4°C were investigated. Moreover, the amounts of syneresis, total phenolic content, antioxidant activity and sensory attributes of yogurts at the end of fermentation were assessed. Yogurts contained the two yogurt bacteria (Streptococcus thermophilus and Lactobacillus delbrueckii ssp. bulgaricus: ABY or only S. thermophilus (ABT as adjunct culture to probiotics. Yogurts containing Cynara scolymus L. (ABT-C and ABY-C had faster acidity increase, shorter incubation time and greater final titrable acidity than control yogurts (ABT and ABY. Also, yogurts containing Cynara scolymus L. had lower syneresis, higher total phenolic content and greater antioxidant activity. ABT-C yogurt had the ever greatest viability of probiotics. In case of samples sensory evaluation, generally, the highest total score was related to ABT yogurt whereas lowest total score belonged to ABT-C yogurt.

  9. Effect of artichoke (Cynara scolymus L. by-product on the quality and total phenol content of bread

    Directory of Open Access Journals (Sweden)

    Maroua Boubaker

    2016-06-01

    Full Text Available Legume flours, due to their phenol and fibre content, are ideal ingredients for improving the nutritional value of bakery products. In this study, artichoke stem powder (ASP was used to substitute 0%, 2.5%, 5%, 7.5% and 10% of wheat flour for making breads. Proximate composition of wheat flour and ASP were determined. Bread qualities and total phenols content were analyzed and compared with those of wheat bread. Results show that ASP contained 10.37% moisture, 10.28% ash, 11.53% protein, 0.86% fat, 51.29% fibre and 1350 mg EAG/100g d.m. ASP addition considerably modified the bread quality: altered appearance and texture, darker crumb and more intense odour were observed. From the sensory evaluation, tastes of bread with higher content of ASP (7.5 and 10% were the most acceptable for assessors. Total phenol contents of breads significantly increased with the addition of ASP. Therefore ASP may be considered as valuable ingredients for industrial manufacture of functional foods.

  10. Nursery inoculation with the arbuscular mycorrhizal fungus Glomus viscosum and its effect on the growth and physiology of hybrid artichoke seedlings

    Directory of Open Access Journals (Sweden)

    Angela Campanelli

    2011-07-01

    Full Text Available Most nurseries operating in Italy adopt high technologies and produce transplants that well suit and satisfy the grower’s need to produce high value crops. Mycorrhizas are discussed as a tool for improving and developing plant production in the nursery. Much research has been carried out on mycorrhizal symbiosis and we now know more about the symbiontic relationship between fungi and host plants. Plants receive numerous benefits from this symbiosis which are more macroscopic the earlier in the ontogenetic cycle this symbiosis is established. Therefore, it appears that the most effective period in which the inoculum should be made corresponds to the in-nursery growing stage. The earlier the plant is inoculated, the more evident the effect will be. In this study, several aspects related to the physiological foundations of arbuscular mycorrhiza in artichoke plants are presented. The main goal was to study the effects of mycorrhiza on the growth and physiological parameters of three hybrids of artichokes growing in the nursery. The experimental 3¥2 design included two treatments (with or without arbuscular mycorrhizal fungi and three hybrids of artichokes marketed by Nunhems (Opal F1, Madrigal F1, Concerto F1. Mycorrhizal plants have greater shoot length, leaf area, shoot and root fresh and dry mass, and root density. This also corresponded with increased photosynthetic rates and stomatal conductance of mycorrhizal plants. Mycorrhizal colonization improves relative water content and increases proline concentration in vegetal tissue. Inoculation produced the most beneficial effect on hybrid Madrigal F1 and on hybrid Opal F1; the best mycorrhizal affinity was enhanced when compared to hybrid Concerto F1. The results showed that mycorrhizal symbiosis stimulated the growth of inoculated seedlings providing a qualitatively good propagation material.

  11. Concentración nutrimental en hojas de aguacate 'Hass' con síntoma de moteado Nutrimental concentration in 'Hass' avocado leaves with mottled symptom

    Directory of Open Access Journals (Sweden)

    Edgardo Federico Hernández-Valdés

    2012-06-01

    Full Text Available El llamado "moteado de las hojas" en el cultivo de aguacate está ampliamente distribuido en las zonas de producción más importante de México, y se desconoce los factores involucrados en la aparición de este síntoma foliar. Por ello, se contrastó el contenido nutrimental en hojas de aguacate 'Hass' colectadas de árboles sin la presencia del moteado (tratamiento A, contra hojas que tampoco manifestaran el síntoma pero provenientes de árboles con el daño foliar (tratamiento B y hojas con la presencia del síntoma (Tratamiento C. Se encontró que, aquellas hojas con "moteados" intervenales tuvieron menor concentración de N, P, K, y Mn, respecto a las que no presentaron el síntoma, mientras que las concentraciones de Ca, Mg, Fe, Zn, Cu y B hojas con y sin moteado fueron similares.The problem called as "mottled leaves" in avocado crop is widely spread in the most important production zones from Mexico, and it is unknown which factors are involved in this foliar symptom appearance. By this reason, the nutrimental content in 'Hass' avocado foils collected from trees without mottled presence (treatment A was collated against leaves that either showed the symptom although coming from trees with foliar damage (treatment b and leaves with symptom presence (Treatment C. It was found that those leaves with interveinal "mottled" had least N, P, K, and Mn concentration with regards the ones that show no symptom, while Ca, Mg, Fe, Zn, Cu and B concentrations in leaves with and without mottling were similar.

  12. 菊芋对四川泡菜储藏期间品质变化影响的研究%Study on the Effects of Jerusalem Artichoke on the Quality Changes in the Natural Fermentation of Pickle during Storage

    Institute of Scientific and Technical Information of China (English)

    刘晓莉

    2012-01-01

    Jerusalem artichoke was rich in amino acid, sugar and vitamin, and used for curing pickles or pickled made. Merchant artichoke, Chinese cabbage, radish as raw materials in the salt concentration was 6% , under natural fer-mentation conditions, the comparison experiment of pickle contend Jerusalem artichoke and without was carried out. The results showed that adding the Jerusalem artichoke had little effects on the pH value and total acidity, but increased the ni-trite and ammonia nitrogen content significantly.%菊芋富含氨基酸、糖分和维生素,多用来腌制咸菜或制成泡菜。以市售菊芋、白菜、萝b为原料在食盐浓度为6%、自然发酵条件下的含菊芋的泡菜和不含菊芋的泡菜进行比较实验,实验结果表明:添加菊芋对泡菜pH值、总酸度影响不大,明显增加了亚硝酸盐和氨态氮含量。

  13. Effect of Chlorocholine Chloride (CCC on the Plants’ Height and Inulin Content in Jerusalem Artichoke (Helianthus tuberosus L.

    Directory of Open Access Journals (Sweden)

    Mikołaj Wawrzyniak

    2016-11-01

    Full Text Available Jerusalem artichoke (Helianthus tuberosus L. is herbaceous perennial plant rich in inulin and useful source of biomass. Due to its low agricultural requirements and high adaptability, it can provide very high biomass yields even on low quality sites. The plant is used in food industry, bio-fuel production, forage, pharmacy and nutrition. Its tubers accumulate approx. 10-20% of inulin in fresh weight. Currently, the use of the Helianthius tuberosus L. as a potential dietary strategy in patients affected by type 2 Diabetes is challenge. Moreover, deep understanding of the relationship between diet and composition of gut microbiota can bring the new insight in the treatment of inflammatory dependent diseases. The aim of this study was to examine an effect of plant growth retardant Chlorocholine Chloride (CCC on the plants’ height of H. tuberosus and inulin content in the tubers. We examined in the field a procedure for its shoots reduction. Material for the experiment were bought in a Polish commercial company and 528 tubers were planted in field in the middle of April 2014. Then, half of them were sprayed with 0.75% retardant of CCC . Furthermore, every week for 12 following weeks, the plants’ heights were measured. After the vegetation was over, 6 tubers for each treatment were dug out and chemically analyzed for inulin content using High Pressure Size Exclusion Chromatography. After first week of CCC use, 16% decrease of the heights plants was observed. Height of plants sprayed with CCC were significantly different comparing to Control. Weekly growth was significantly  slower in plants sprayed with CCC on first three weeks after applying retardant. Differences in plants height sustain to the end of measurements. Used retardant and its concentration did not affect the inulin content of the tubers.

  14. Structural transitions and energy landscape for Cowpea Chlorotic Mottle Virus capsid mechanics from nanomanipulation in vitro and in silico

    CERN Document Server

    Kononova, Olga; Brasch, Melanie; Cornelissen, Jeroen; Dima, Ruxandra I; Marx, Kenneth A; Wuite, Gijs J L; Roos, Wouter H; Barsegov, Valeri

    2015-01-01

    Physical properties of capsids of plant and animal viruses are important factors in capsid self-assembly, survival of viruses in the extracellular environment, and their cell infectivity. Virus shells can have applications as nanocontainers and delivery vehicles in biotechnology and medicine. Combined AFM experiments and computational modeling on sub-second timescales of the indentation nanomechanics of Cowpea Chlorotic Mottle Virus (CCMV) capsid show that the capsid's physical properties are dynamic and local characteristics of the structure, which depend on the magnitude and geometry of mechanical input. Surprisingly, under large deformations the CCMV capsid transitions to the collapsed state without substantial local structural alterations. The enthalpy change in this deformation state dH = 11.5 - 12.8 MJ/mol is mostly due to large-amplitude out-of-plane excitations, which contribute to the capsid bending, and the entropy change TdS = 5.1 - 5.8 MJ/mol is mostly due to coherent in-plane rearrangements of pr...

  15. Occurrence of Squash yellow mild mottle virus and Pepper golden mosaic virus in Potential New Hosts in Costa Rica

    Directory of Open Access Journals (Sweden)

    Ruth M. Castro

    2013-09-01

    Full Text Available Leaf samples of Solanum lycopersicum, Capsicum annuum, Cucurbita moschata, Cucurbita pepo, Sechium edule and Erythrina spp. were collected. All samples were positive for begomoviruses using polymerase chain reaction and degenerate primers. A sequence of ∼1,100 bp was obtained from the genomic component DNA-A of 14 samples. In addition, one sequence of ∼580 bp corresponding to the coat protein (AV1 was obtained from a chayote (S. edule leaf sample. The presence of Squash yellow mild mottle virus (SYMMoV and Pepper golden mosaic virus (PepGMV were confirmed. The host range reported for SYMMoV includes species of the Cucurbitaceae, Caricaceae and Fabaceae families. This report extends the host range of SYMMoV to include the Solanaceae family, and extends the host range of PepGMV to include C. moschata, C. pepo and the Fabaceae Erythrina spp. This is the first report of a begomovirus (PepGMV infecting chayote in the Western Hemisphere.

  16. Occurrence of Squash yellow mild mottle virus and Pepper golden mosaic virus in Potential New Hosts in Costa Rica.

    Science.gov (United States)

    Castro, Ruth M; Moreira, Lisela; Rojas, María R; Gilbertson, Robert L; Hernández, Eduardo; Mora, Floribeth; Ramírez, Pilar

    2013-09-01

    Leaf samples of Solanum lycopersicum, Capsicum annuum, Cucurbita moschata, Cucurbita pepo, Sechium edule and Erythrina spp. were collected. All samples were positive for begomoviruses using polymerase chain reaction and degenerate primers. A sequence of ∼1,100 bp was obtained from the genomic component DNA-A of 14 samples. In addition, one sequence of ∼580 bp corresponding to the coat protein (AV1) was obtained from a chayote (S. edule) leaf sample. The presence of Squash yellow mild mottle virus (SYMMoV) and Pepper golden mosaic virus (PepGMV) were confirmed. The host range reported for SYMMoV includes species of the Cucurbitaceae, Caricaceae and Fabaceae families. This report extends the host range of SYMMoV to include the Solanaceae family, and extends the host range of PepGMV to include C. moschata, C. pepo and the Fabaceae Erythrina spp. This is the first report of a begomovirus (PepGMV) infecting chayote in the Western Hemisphere.

  17. The development of an efficient multipurpose bean pod mottle virus viral vector set for foreign gene expression and RNA silencing.

    Science.gov (United States)

    Zhang, Chunquan; Bradshaw, Jeffrey D; Whitham, Steven A; Hill, John H

    2010-05-01

    Plant viral vectors are valuable tools for heterologous gene expression, and because of virus-induced gene silencing (VIGS), they also have important applications as reverse genetics tools for gene function studies. Viral vectors are especially useful for plants such as soybean (Glycine max) that are recalcitrant to transformation. Previously, two generations of bean pod mottle virus (BPMV; genus Comovirus) vectors have been developed for overexpressing and silencing genes in soybean. However, the design of the previous vectors imposes constraints that limit their utility. For example, VIGS target sequences must be expressed as fusion proteins in the same reading frame as the viral polyprotein. This requirement limits the design of VIGS target sequences to open reading frames. Furthermore, expression of multiple genes or simultaneous silencing of one gene and expression of another was not possible. To overcome these and other issues, a new BPMV-based vector system was developed to facilitate a variety of applications for gene function studies in soybean as well as in common bean (Phaseolus vulgaris). These vectors are designed for simultaneous expression of multiple foreign genes, insertion of noncoding/antisense sequences, and simultaneous expression and silencing. The simultaneous expression of green fluorescent protein and silencing of phytoene desaturase shows that marker gene-assisted silencing is feasible. These results demonstrate the utility of this BPMV vector set for a wide range of applications in soybean and common bean, and they have implications for improvement of other plant virus-based vector systems.

  18. Completion sequence and cloning of the infectious cDNA of a chb isolate of cucumber green mottle mosaic virus.

    Science.gov (United States)

    Zhong, M; Zhao, X; Liu, Y; Wang, Y; Cao, K

    2015-03-01

    Cucumber green mottle mosaic virus (CGMMV) is an important and widespread seed-borne virus that infects Cucurbitaceous plants. It is a member of the genus Tobamovirus in the family Virgaviridae with a monopartite (+) ssRNA genome. Here we report the complete genome sequence, construction and testing of the infectious clones of a chb isolate of CGMMV. Full-length CGMMV cDNA was cloned into the vector pUC19. The linearized vector containing full-length cDNA was used as template for in vitro transcription, and the synthesized capped transcript was highly infectious in Chenopodium amaranticolor and cucumber (Cucumis sativus). Inoculated plants showed symptoms typical of CGMMV infection. The infectivity was confirmed by mechanical transmission to new plants, RT-PCR and western blot. Progeny virus derived from infectious transcripts had the same biological and biochemical properties as wild-type virus. To our knowledge, this is the first detailed report of a biologically active transcript from CGMMV.

  19. One-step reverse transcription loop-mediated isothermal amplification for the rapid detection of cucumber green mottle mosaic virus.

    Science.gov (United States)

    Li, Jin-yu; Wei, Qi-wei; Liu, Yong; Tan, Xin-qiu; Zhang, Wen-na; Wu, Jian-yan; Charimbu, Miriam Karwitha; Hu, Bai-shi; Cheng, Zhao-bang; Yu, Cui; Tao, Xiao-rong

    2013-11-01

    Cucumber green mottle mosaic virus (CGMMV) has caused serious damage to Cucurbitaceae crops worldwide. The virus is considered one of the most serious Cucurbitaceae quarantine causes in many countries. In this study, a highly efficient and practical one-step reverse transcription loop-mediated isothermal amplification (RT-LAMP) was developed for the detection of CGMMV. The total RNA or crude RNA extracted from watermelon plants or seeds could be detected easily by this RT-LAMP assay. The RT-LAMP assay was conducted in isothermal (63°C) conditions within 1h. The amplified products of CGMMV could be detected as ladder-like bands using agarose gel electrophoresis or visualized in-tube under UV light with the addition of a fluorescent dye. The RT-LAMP amplification was specific to CGMMV, as no cross-reaction was observed with other viruses. The RT-LAMP assay was 100-fold more sensitive than that of reverse-transcription polymerase chain reaction (RT-PCR). This is the first report of the application of the RT-LAMP assay to detect CGMMV. The sensitive, specific and rapid RT-LAMP assay developed in this study can be applied widely in laboratories, the field and quarantine surveillance of CGMMV.

  20. The 42-kDa coat protein of Andean potato mottle virus acts as a transcriptional activator in yeast

    Directory of Open Access Journals (Sweden)

    Vidal M.S.

    2002-01-01

    Full Text Available Interactions of viral proteins play an important role in the virus life cycle, especially in capsid assembly. Andean potato mottle comovirus (APMoV is a plant RNA virus with a virion formed by two coat proteins (CP42 and CP22. Both APMoV coat protein open reading frames were cloned into pGBT9 and pGAD10, two-hybrid system vectors. HF7c yeast cells transformed with the p9CP42 construct grew on yeast dropout selection media lacking tryptophan and histidine. Clones also exhibited ß-galactosidase activity in both qualitative and quantitative assays. These results suggest that CP42 protein contains an amino acid motif able to activate transcription of His3 and lacZ reporter genes in Saccharomyces cerevisiae. Several deletions of the CP42 gene were cloned into the pGBT9 vector to locate the region involved in this activation. CP42 constructions lacking 12 residues from the C-terminal region and another one with 267 residues deleted from the N-terminus are still able to activate transcription of reporter genes. However, transcription activation was not observed with construction p9CP42deltaC57, which does not contain the last 57 amino acid residues. These results demonstrate that a transcription activation domain is present at the C-terminus of CP42 between residues 267 and 374.

  1. Structural Transitions and Energy Landscape for Cowpea Chlorotic Mottle Virus Capsid Mechanics from Nanomanipulation in Vitro and in Silico

    Science.gov (United States)

    Kononova, Olga; Snijder, Joost; Brasch, Melanie; Cornelissen, Jeroen; Dima, Ruxandra I.; Marx, Kenneth A.; Wuite, Gijs J. L.; Roos, Wouter H.; Barsegov, Valeri

    2013-10-01

    Physical properties of capsids of plant and animal viruses are important factors in capsid self-assembly, survival of viruses in the extracellular environment, and their cell infectivity. Virus shells can have applications as nanocontainers and delivery vehicles in biotechnology and medicine. Combined AFM experiments and computational modeling on sub-second timescales of the indentation nanomechanics of Cowpea Chlorotic Mottle Virus (CCMV) capsid show that the capsid's physical properties are dynamic and local characteristics of the structure, which depend on the magnitude and geometry of mechanical input. Surprisingly, under large deformations the CCMV capsid transitions to the collapsed state without substantial local structural alterations. The enthalpy change in this deformation state dH = 11.5 - 12.8 MJ/mol is mostly due to large-amplitude out-of-plane excitations, which contribute to the capsid bending, and the entropy change TdS = 5.1 - 5.8 MJ/mol is mostly due to coherent in-plane rearrangements of protein chains, which result in the capsid stiffening. Dynamic coupling of these modes defines the extent of elasticity and reversibility of capsid mechanical deformation. This emerging picture illuminates how unique physico-chemical properties of protein nanoshells help define their structure and morphology, and determine their viruses' biological function.

  2. Foliar symptoms recovery: developing scoring technique for assessment of soybean resistance to CPMMV (Cowpea Mild Mottle Virus

    Directory of Open Access Journals (Sweden)

    Siti Zubaidah

    2016-09-01

    Full Text Available Soybean is a commodity that has an important role as the source of protein, but its production is affected by various factors including disease. CpMMV (Cowpea mild mottle virus is one of the most damaging viruses that cause soybean disease. CpMMVs belong to the group of Carlavirus that are transmitted by whitefly (Bemisia tabaci. The use of CpMMV resistant plants as biological control can prevent viral diseases. Indonesia has many soybean germplasm from many regions and introduction from other countries that need to be evaluated for CpMMV. The assessment technique for soybean resistance to CpMMV is not available yet, but it is still based on other virus diseases. The specific assessment of plant resistance is important because some diseases can cause certain symptoms, depends on the resistance and the kinds of plants that are infected. This paper presents the assessment technique for soybean resistance to CpMMV infection, which can be used for various purposes and studies. One of the benefits is to find out soybean resistance to CpMMV or other objectives. This resistance assessment is not only based on leaves symptoms, but also based on the phenomenon of foliar symptoms recovery. Keywords: CpMMV, foliar symptoms recovery, scoring technique, soybean resistance.

  3. Study of self-pollination and capitula characteristics in globe artichoke (Cynara cardunculus var. scolymus Hayek L. under different irrigation regimes

    Directory of Open Access Journals (Sweden)

    Nouraei, Sina

    2016-07-01

    Full Text Available In order to estimate the drought effects on capitula characteristics and self-pollination of globe artichoke (Cynara cardunculus var. scolymus Hayek L., the randomized complete block design was carried out with three irrigation regimes (20 %, 50 % and 80 % depletion of soil available water and six replicates. The artichoke is mostly open-pollinated, however, after covering the buds and isolation of flowers to prevent cross pollination, 1.79 % self-pollination was observed and this amount was not affected by different irrigation regimes. In stress conditions (50 % and 80 % water depletion as well as non-stress condition (20 % water depletion, plants with respectively one and two medium capitula and without small capitula had most relative frequencies in the population and drought stress increased these relative frequencies by reducing the number of medium and small capitula in plants. In addition, Capitula size and dry weight were significantly affected by water stress. Water shortage induced severe decrease in length and dry weight of all capitula including large, medium and small, although capitula width was less affected by water deficit and only slight decline in medium (12.5 % and small capitula (23.7 % was observed under severe stress condition.

  4. Effect of Saline Aquaculture Effluent on Salt-Tolerant Jerusalem Artichoke (Helianthus tuberosus L.) in a Semi-Arid Coastal Area of China

    Institute of Scientific and Technical Information of China (English)

    ZHAO Geng-Mao; LIU Zhao-Pu; CHEN Ming-Da; KOU Wei-Feng

    2006-01-01

    An experiment with six treatments: CK1 (rainfed), CK2 (irrigated with freshwater), and 4 treatments of saline aquaculture effluent blended with brackish groundwater at different ratios of 1:1, 1:2, 1:3, and 1:4 (v/v) was carried out during 2004 to assess the effect of saline aquaculture effluent on plant growth and soil properties in the Laizhou region, Shandong Province, China and to determine an optimal salinity threshold for aquaculture effluent. Cumulative evapotranspiration for the saline aquaculture effluent irrigation and non-irrigation treatments was lower than that for the freshwater irrigation treatment. Soil electrical conductivity was higher with respect to saline aquaculture effluent irrigation treatment compared to that with respect to non-irrigation or freshwater irrigation treatment. For Jerusalem artichoke (Helianthus tuberosus L.), in comparison to the freshwater treatment, plant height and aboveground biomass for the 1:3 and 1:4 treatments were constrained, whereas stem width and root biomass were enhanced. Concomitantly,higher tuber yield was obtained for the 1:3 and 1:4 treatments compared to that for CK1 and 1:1 treatments. Nitrogen and phosphorus were higher in tubers of the 1:4 treatment. This study demonstrated that saline aquaculture effluent could be used successfully to irrigate Jerusalem artichoke with higher tuber yield and nutrient removal

  5. 盐碱土壤对菊芋菊糖含量的影响%Effects of Saline-alkali Soils on Inulin Content in Jerusalem artichokes

    Institute of Scientific and Technical Information of China (English)

    周东; 隋丹; 于涛; 蔺吉祥

    2014-01-01

    为明确盐碱土壤对菊芋(Helianthus tuberosus )中菊糖含量的影响,利用高效液相色谱法对农田土壤与盐碱土壤上生长的7个品系菊芋的菊糖含量进行分析,盐碱土壤包括轻度盐碱土壤与重度盐碱土壤。结果表明:生长于盐碱土壤的菊芋的菊糖含量均低于农田土壤,其中菊芋品系2、品系5和品系7在轻度盐碱土壤中生长时菊糖含量高于重度盐碱土壤;菊芋品系1、品系4和品系6在重度盐碱土壤中生长时菊糖含量高于轻度盐碱土壤。7个品系中,品系4的菊糖含量在盐碱土壤下降低最多,品系6的菊糖含量在盐碱土壤下降低最少,但其含量在三种生长条件下是所有品系中最低的;品系5的菊糖含量虽然在盐碱土壤下也有所降低,但其含量在三种生长条件下都是所有品系中最高的,推测品系5比较适合在盐碱土壤上生长,在改良盐碱地时可优先选用。%To clarify the effects of saline soils on inulin content in Jerusalem artichokes,we analyze the inulin content of seven strains of Jerusalem artichokes grown on farmland and saline soils,which in-clude mild saline soils and severe saline soils by HPLC.The results show that the inulin content in Je-rusalem artichokes grown on the saline soils is lower than that on the farmland.It is also found that the inulin content in Jerusalem artichokes strain 2,strain 5,and strain 7 grown on the mild saline soils is higher than that on the severe saline soils and the inulin content in Jerusalem artichokes strain 1,strain 4,strain 6 grown on the severe saline soils is higher than that on the mild saline soil.The in-ulin content of strain 4 declines the most on the saline soils in the seven strains.The inulin content of strain 6 declines the least on the saline soils,but its inulin content is the lowest in the seven strains under the three growing conditions.Although the inulin content of strain 5 also declines on the saline

  6. El potencial del topinambur en la salud y la nutrición The potential of Jerusalem Artichokes in health and nutrition

    Directory of Open Access Journals (Sweden)

    D Scollo

    2011-12-01

    Full Text Available Introducción: El topinambur es un tubérculo con alto contenido en inulina. La inulina es un carbohidrato soluble no digerible que está presente en muchos vegetales, frutas y cereales siendo usada ampliamente como ingrediente en alimentos funcionales. Objetivo: Obtener tubérculos de topinambur, fijar distintos parámetros de extracción de inulina y preparar diversos alimentos, reemplazando parte de las harinas tradicionales por harina de topinambur. Se propuso, además, evaluar la preferencia de los consumidores sobre los mismos. Material y métodos: Se sembraron y cosecharon tubérculos de topinambur partiendo de 4 parcelas con diferentes condiciones de riego y fertilización. Los mismos se conservaron a variadas temperaturas. Se determinó el contenido de inulina por HPLC y se realizó la extracción de la misma de los tubérculos. A partir de los tubérculos cosechados en la parcela 3 se elaboraron harinas que fueron utilizadas para reemplazar parcialmente a la harina de trigo en la preparación de diferentes productos alimenticios. Sobre los mismos se realizó una evaluación de preferencia. Resultados: El rinde de la cosecha fue mayor en la parcela 3 (tierra fértil y riego según necesidades, 91 ton/Ha. El método de conservación más adecuado fue el frío, sin embargo no se utilizaron estos tubérculos para la extracción de inulina. Los productos alimenticios obtenidos fueron considerados adecuados por los jueces intervinientes. Conclusiones: la elaboración de productos alimenticios a partir de harina de topinambur podría ser una alternativa de alimento funcional por su contenido de inulina.Introduction: The Jerusalem artichoke Is a tuber high in inulin. Inulin is a soluble non-digestible carbohydrate that is present in many vegetables, fruits and cereals and is widely used as an ingredient in functional foods. Objective: To get Jerusalem artichoke tubers, set various parameters for extraction of inulin and prepare various foods

  7. Pepper mild mottle virus, a plant virus associated with specific immune responses, Fever, abdominal pains, and pruritus in humans.

    Directory of Open Access Journals (Sweden)

    Philippe Colson

    Full Text Available BACKGROUND: Recently, metagenomic studies have identified viable Pepper mild mottle virus (PMMoV, a plant virus, in the stool of healthy subjects. However, its source and role as pathogen have not been determined. METHODS AND FINDINGS: 21 commercialized food products containing peppers, 357 stool samples from 304 adults and 208 stool samples from 137 children were tested for PMMoV using real-time PCR, sequencing, and electron microscopy. Anti-PMMoV IgM antibody testing was concurrently performed. A case-control study tested the association of biological and clinical symptoms with the presence of PMMoV in the stool. Twelve (57% food products were positive for PMMoV RNA sequencing. Stool samples from twenty-two (7.2% adults and one child (0.7% were positive for PMMoV by real-time PCR. Positive cases were significantly more likely to have been sampled in Dermatology Units (p<10(-6, to be seropositive for anti-PMMoV IgM antibodies (p = 0.026 and to be patients who exhibited fever, abdominal pains, and pruritus (p = 0.045, 0.038 and 0.046, respectively. CONCLUSIONS: Our study identified a local source of PMMoV and linked the presence of PMMoV RNA in stool with a specific immune response and clinical symptoms. Although clinical symptoms may be imputable to another cofactor, including spicy food, our data suggest the possibility of a direct or indirect pathogenic role of plant viruses in humans.

  8. 菊芋中菊糖提取与纯化工艺研究%Study on Extraction and Purification Technology of Inulin from Jerusalem Artichokes

    Institute of Scientific and Technical Information of China (English)

    王振强; 申森; 张耀光

    2011-01-01

    Study that the extraction and purification of jerusalem artichoke. First, the drying method of the artichoke slices that was being dried in the oven by hot air at 60 ℃ was indicated. And the extraction temperature, the extraction time, the solid to liquid ratio, the extraction times were selected for the singlefactor test. Second, the range of conditions was determined, the extraction conditions were optimized by orthogonal experiment, the optimal conditions of the inulin extraction from jerusalem artichoke were obtained, the extraction temperature was 70 ℃, the extraction time was 70 min, the solid to liquid ratio was 1 : 30, the extraction times was two, and the inulin yield rate was up to 52.80%. Others, the best treatment conditions of protein removal by milk of lime were determined, water bath temperature was between 70 ℃ and 80 ℃, water bath time was from 60 min to 90 min, with the best effect of depigmentation by macroporous adsorptive resins S-8 and the low rate of inulin loss.%研究了菊芋中菊糖的提取与纯化,确定了菊芋片干燥方法为60℃烘箱热风烘干。选择提取温度、提取时间、料液比、提取次数进行单因素试验,确定条件范围,再采用正交试验优化提取条件,得到菊芋中菊糖提取最佳工艺条件为温度70℃,提取时间70min,料液比1:30,提取次数2次,菊糖得率可达52.80%。并确定了石灰乳法脱蛋白最佳处理条件为水浴温度70℃~80℃,水浴时间60min-90min,大孔吸附树脂S.8的脱色素效果最好,菊糖损失率较低。

  9. 微波法提取菊芋中菊糖的工艺研究%Microwave Extraction of Inulin from Jerusalem artichoke

    Institute of Scientific and Technical Information of China (English)

    贾若凌

    2012-01-01

    [ Objective] To optimize the microwave extraction technology of inulin from J. artichoke. [ Method] With fresh J. artichoke tuber as experimental materials, based on a single factor experiment, five factors of microwave power, extraction time, solid - liquid ratio, extraction frequency and extraction temperature were selected to perform an orthogonal experiment L16(45) at four levels to study the best extraction conditions of J. artichoke. [ Result] The best extraction conditions were 8 min of microwave time, 95 ℃ of extraction temperature, 500 W of microwave power, 1: 20( W/V,g/ml) of solid-liquid ratio and three times of extraction frequency; under the best conditions, the extraction rate of inulin could reach up to 68.11%. [Conclusion] The method optimized the microwave extraction conditions of inulin, and the results were accurate and practical.%[目的]优选菊芋中菊糖的微波提取工艺.[方法]以新鲜的菊芋块茎为原料,在单因素试验的基础上,以微波功率、提取时间、料液比、提取次数和提取温度为因素,设计5因素4水平的正交试验L16 (45),研究菊糖的提取及其分离纯化的最佳工艺条件.[结果]确定微波法提取菊糖的最佳工艺条件为:微波时间8 min,提取温度95℃,微波功率500W,料液比为1∶20(W/V,g/ml,下同),提取3次;在此条件下,菊芋葡糖的提取率为68.11%.[结论]该方法优选出了菊芋中菊糖的微波提取工艺,结果准确可行.

  10. Endothelin receptor B2 (EDNRB2 is responsible for the tyrosinase-independent recessive white (mo(w and mottled (mo plumage phenotypes in the chicken.

    Directory of Open Access Journals (Sweden)

    Keiji Kinoshita

    Full Text Available A mutation that confers white plumage with black eyes was identified in the Minohiki breed of Japanese native chicken (Gallus gallus domesticus. The white plumage, with a few partially pigmented feathers, was not associated with the tyrosinase gene, and displayed an autosomal recessive mode of inheritance against the pigmented phenotype. All F1 offspring derived from crosses with mottled chickens (mo/mo, which show characteristic pigmented feathers with white tips, had plumage with a mottled-like pattern. This result indicates that the white plumage mutation is a novel allele at the mo locus; we propose the gene symbol mo(w for this mutant allele. Furthermore, the F1 hybrid between the mo(w /mo(w chicken and the panda (s/s mutant of Japanese quail (Coturnix japonica, whose causative gene is the endothelin receptor B2 (EDNRB2 gene, showed a mo(w/mo(w chicken-like plumage, suggesting the possibility that the mutations in parental species are alleles of the same gene, EDNRB2. Nucleotide sequencing of the entire coding region of EDNRB2 revealed a non-synonymous G1008T substitution, which causes Cys244Phe amino acid substitution in exon 5 (which is part of the extracellular loop between the putative fourth and fifth transmembrane domains of EDNRB2 in the mutant chicken. This Cys244Phe mutation was also present in individuals of four Japanese breeds with white plumage. We also identified a non-synonymous substitution leading to Arg332His substitution that was responsible for the mottled (mo/mo plumage phenotype. These results suggest that the EDN3 (endothelin 3-EDNRB2 signaling is essential for normal pigmentation in birds, and that the mutations of EDNRB2 may cause defective binding of the protein with endothelins, which interferes with melanocyte differentiation, proliferation, and migration.

  11. Replication and encapsidation of the viroid-like satellite RNA of lucerne transient streak virus are supported in divergent hosts by cocksfoot mottle virus and turnip rosette virus.

    Science.gov (United States)

    Sehgal, O P; Sinha, R C; Gellatly, D L; Ivanov, I; AbouHaidar, M G

    1993-04-01

    Cocksfoot mottle sobemovirus supports replication and encapsidation of the viroid-like satellite RNA (sat-RNA) of lucerne transient streak virus (LTSV) in two monocotyledonous species, Triticum aestivum and Dactylis glomerata. Additionally, LTSV sat-RNA replicates effectively in the presence of turnip rosette sobemovirus in Brassica rapa, Raphanus raphanistrum and Sinapsis arvensis, but not in Thlaspi arvense or Nicotiana bigelovii, indicating that host species markedly influence this interaction. Previous reports of the association between LTSV sat-RNA and helper sobemoviruses were limited to dicotyledonous hosts. Our results demonstrate that the biological interaction between these two entities spans divergent dicotyledonous and monocotyledonous species.

  12. Comparisons of coat protein gene sequences show that East African isolates of Sweet potato feathery mottle virus form a genetically distinct group.

    Science.gov (United States)

    Kreuze, J F; Karyeija, R F; Gibson, R W; Valkonen, J P

    2000-01-01

    Sweet potato feathery mottle virus (SPFMV, genus Potyvirus) infects sweet potatoes (Ipomoea batatas) worldwide, but no sequence data on isolates from Africa are available. Coat protein (CP) gene sequences from eight East African isolates from Madagascar and different districts of Uganda (the second biggest sweet potato producer in the world) and two West African isolates from Nigeria and Niger were determined. They were compared by phylogenetic analysis with the previously reported sequences of ten SPFMV isolates from other continents. The East African SPFMV isolates formed a distinct cluster, whereas the other isolates were not clustered according to geographic origin. These data indicate that East African isolates of SPFMV form a genetically unique group.

  13. Development of an agroinoculation system for full-length and GFP-tagged cDNA clones of cucumber green mottle mosaic virus.

    Science.gov (United States)

    Zheng, Hongying; Xiao, Caili; Han, Kelei; Peng, Jiejun; Lin, Lin; Lu, Yuwen; Xie, Li; Wu, Xiaohua; Xu, Pei; Li, Guojing; Chen, Jianping; Yan, Fei

    2015-11-01

    The complete 6243-nucleotide sequence of a cucumber green mottle mosaic virus (CGMMV) isolate from bottle gourd in Zhejiang province, China, was determined. A full-length cDNA clone of this isolate was constructed by inserting the cDNA between the 35S promoter and the ribozyme in the binary plasmid pCB301-CH. A suspension of an Agrobacterium tumefaciens EHA105 clone carrying this construct was highly infectious in Nicotiana benthamiana and bottle gourd. Another infectious clone containing the green fluorescence protein (GFP) reporter gene was also successfully constructed. This study is the first report of the efficient use of agroinoculation for generating CGMMV infections.

  14. Analysis of anisotropic spin-label motion in saturation-transfer ESR spectra of spin-labeled cowpea chlorotic mottle virus

    Science.gov (United States)

    Hemminga, M. A.; Faber, A. J.

    A saturation-transfer ESR study is carried out on maleimide spin-labeled cowpea chlorotic mottle virus dissolved in various glycerol-water systems. The saturation-transfer ESR spectra were analyzed by comparing them with reference spectra of isotropically reorienting spin labels. The results are interpreted in terms of the overall motion of the virus particle, described by an isotropic rotational correlation time τR, and a local anisotropic spin-label motion with rotational correlation times τ| and τ⊥.

  15. Production of a single cyclic type of fructooligosaccharide structure by inulin-degrading Paenibacillus sp. LX16 newly isolated from Jerusalem artichoke root.

    Science.gov (United States)

    Yao, Zhihua; Guo, Jiqiang; Tang, Wenzhu; Sun, Zhen; Hou, Yingmin; Li, Xianzhen

    2016-05-01

    A novel inulin-degrading bacterium was isolated from a soil sample collected on Jerusalem artichoke roots. It is a Gram-positive, aerobic, motile and central endospore-forming straight rod, and exhibits phenotypic properties being consistent with its classification in the genus Paenibacillus. The predominant cellular fatty acids were anteiso-C15:0, C16:0 and anteiso-C17:0. This strain represents a novel species of the genus Paenibacillus on the basis of phenotypic data together with phylogenetic analysis, and it is here designated as LX16 and deposited in China centre for type collection, China (= CCTCC 2015256). Strain LX16 could produce a cyclofructooligosaccharide fructanotransferase catalysing the formation of one type of fructooligosaccharide (FOS) from inulin. The FOS was identified as a cyclofructooligosaccharide with a degree of polymerization of 6. Such homology in inulin degradation products may be beneficial for the functional FOS production.

  16. 酒曲应用于菊芋发酵的初步研究%A preliminary study fermentation of Jerusalem artichoke with koji

    Institute of Scientific and Technical Information of China (English)

    冯迪; 隆小华; 辛本荣; 刘兆普

    2011-01-01

    Jerusalem artichoke is a kind of alternative ethanol fermentation of raw materials. Compared with starch materials,the temperature of paste for Jerusalem artichoke is lower,which has the advantage in saving energy.Anqi liquor-making koji, Anqi Liqueur Koji and Xinma Liquor Industry Koji were used to study by one-step fermentation experiment and demonstrate the feasibility of producing ethanol fermentation of Jerusalem artichoke.The results were as follows:In the low raw sugar concentration and general treated conditions ,the alcohol content of Anqi liquor-making koji was higher than the other two koji, up to 5.5 degrees. Fermentation process, the weight loss of carbon dioxide of Anqi liquor-making koji was always higher than the other two koji. Use Anqi liquor-making koji to ferment,the ethanol concentration increased with the experimental time lasting during three days. With the further extension of the fermentation time, pH value of its broth was 6.35. pH value fell to 4.82 after 1 day fermentation and 4.48 after 3 days later,then pH value of the trend was stable. It can be concluded that compared with the other two koji, Anqi liquor-making koji was more suitable for bioethanol production using Jerusalem artichoke.%菊芋是一种极具潜力的乙醇发酵原料,与淀粉质原料相比,菊芋低温条件下即可实现糊化,在节能方面具有优势.本文选取了安琪甜酒曲、安琪酿酒曲和欣马酒业酒曲进行一步法发酵实验,论证不同种类及品种的酒曲应用于菊芋发酵生产乙醇的可行性.结果表明:在原料含糖量不高且未经任何条件优化的情况下,安琪酿酒曲的酒度高于其他两种酒曲,酒度可达5.5度;发酵过程中,安琪酿酒曲的CO2失重量始终高于安琪甜酒曲和欣马酒曲;使用安琪酿酒曲进行发酵,第1d到第3d乙醇含量逐渐升高,在第3d时达到最大值;随着发酵时间的继续延长,安琪酿酒曲发酵液PH为6.35.发酵1d后pH降至4.82,3d后pH降至4

  17. Screening pharmaceutical preparations containing extracts of turmeric rhizome, artichoke leaf, devil's claw root and garlic or salmon oil for antioxidant capacity.

    Science.gov (United States)

    Betancor-Fernández, Alejandro; Pérez-Gálvez, Antonio; Sies, Helmut; Stahl, Wilhelm

    2003-07-01

    Pharmaceutical preparations derived from natural sources such as vegetables often contain compounds that contribute to the antioxidant defence system and apparently play a role in the protection against degenerative diseases. In the present study, commercial preparations containing extracts of turmeric, artichoke, devil's claw and garlic or salmon oil were investigated. The products were divided into fractions of different polarity, and their antioxidant activity was determined using the Trolox equivalent antioxidant capacity (TEAC) assay. This test is based on the efficacy of the test material to scavenge 2,2'-azino-bis(3-ethylbenzthiazoline-6-sulfonic acid) (ABTS) derived radicals. Total phenols were determined in all fractions as well as specific carotenoids in the most lipophilic fraction to assess their contribution to the antioxidant activity. For comparison, the radical scavenging effect of selected constituents of the extracts such as curcumin, luteolin, kaempferol, chlorogenic acid, harpagoside, beta-carotene and alpha-tocopherol was investigated and compared with that of Trolox. Curcumin, luteolin, kaempferol, chlorogenic acid and beta-carotene showed an antioxidant activity superior to Trolox in the TEAC assay; harpagoside was barely active. All fractions of the turmeric extract preparation exhibited pronounced antioxidant activity, which was assigned to the presence of curcumin and other polyphenols. The antioxidant activity corresponding to the artichoke leaf extract was higher in the aqueous fractions than in the lipophilic fractions. Similarly, devil's claw extract was particularly rich in water-soluble antioxidants. Harpagoside, a major compound in devil's claw, did not contribute significantly to its antioxidant activity. The antioxidant capacity of the garlic preparation was poor in the TEAC assay. That of salmon oil was mainly attributed to vitamin E, which is added to the product for stabilization. In all test preparations, the antioxidant

  18. The Effect of Ginger (Zingiber officinalis and Artichoke (Cynara cardunculus Extract Supplementation on Functional Dyspepsia: A Randomised, Double-Blind, and Placebo-Controlled Clinical Trial

    Directory of Open Access Journals (Sweden)

    Attilio Giacosa

    2015-01-01

    Full Text Available Objective. Functional dyspepsia (FD is a frequent clinical finding in western world. The aim of this study is to compare the efficacy of a ginger and artichoke supplementation versus placebo in the treatment of FD. Methods. A prospective multicentre, double blind, randomized, placebo controlled, parallel-group comparison of the supplement and placebo over a period of 4 weeks was performed. Two capsules/day were supplied (before lunch and dinner to 126 FD patients (supplementation/placebo: 65/61. Results. After 14 days of treatment, only supplementation group (SG showed a significant amelioration (SG: αS=+1.195 MCA score units (u, P=0.017; placebo: αP=+0.347 u, P=0.513. The intercept (α resulted to be significantly higher in SG than in placebo (αS-αP=+0.848 u, P<0.001. At the end of the study, the advantage of SG versus placebo persists without variation (βS-βP=+0.077 u, P=0.542. In SG, a significant advantage is observed for nausea (βS-βP=-0.398 u, P<0.001, epigastric fullness (βS-βP=-0.241, P<0.001, epigastric pain (βS-βP=-0.173 u, P=0.002, and bloating (βS-βP=-0.167 u, P=0.017. Conclusions. The association between ginger and artichoke leaf extracts appears safe and efficacious in the treatment of FD and could represent a promising treatment for this disease.

  19. A Genome-Wide Survey of the Microsatellite Content of the Globe Artichoke Genome and the Development of a Web-Based Database

    Science.gov (United States)

    Portis, Ezio; Portis, Flavio; Valente, Luisa; Moglia, Andrea; Barchi, Lorenzo; Lanteri, Sergio; Acquadro, Alberto

    2016-01-01

    The recently acquired genome sequence of globe artichoke (Cynara cardunculus var. scolymus) has been used to catalog the genome’s content of simple sequence repeat (SSR) markers. More than 177,000 perfect SSRs were revealed, equivalent to an overall density across the genome of 244.5 SSRs/Mbp, but some 224,000 imperfect SSRs were also identified. About 21% of these SSRs were complex (two stretches of repeats separated by <100 nt). Some 73% of the SSRs were composed of dinucleotide motifs. The SSRs were categorized for the numbers of repeats present, their overall length and were allocated to their linkage group. A total of 4,761 perfect and 6,583 imperfect SSRs were present in 3,781 genes (14.11% of the total), corresponding to an overall density across the gene space of 32,5 and 44,9 SSRs/Mbp for perfect and imperfect motifs, respectively. A putative function has been assigned, using the gene ontology approach, to the set of genes harboring at least one SSR. The same search parameters were applied to reveal the SSR content of 14 other plant species for which genome sequence is available. Certain species-specific SSR motifs were identified, along with a hexa-nucleotide motif shared only with the other two Compositae species (sunflower (Helianthus annuus) and horseweed (Conyza canadensis)) included in the study. Finally, a database, called “Cynara cardunculus MicroSatellite DataBase” (CyMSatDB) was developed to provide a searchable interface to the SSR data. CyMSatDB facilitates the retrieval of SSR markers, as well as suggested forward and reverse primers, on the basis of genomic location, genomic vs genic context, perfect vs imperfect repeat, motif type, motif sequence and repeat number. The SSR markers were validated via an in silico based PCR analysis adopting two available assembled transcriptomes, derived from contrasting globe artichoke accessions, as templates. PMID:27648830

  20. A Genome-Wide Survey of the Microsatellite Content of the Globe Artichoke Genome and the Development of a Web-Based Database.

    Science.gov (United States)

    Portis, Ezio; Portis, Flavio; Valente, Luisa; Moglia, Andrea; Barchi, Lorenzo; Lanteri, Sergio; Acquadro, Alberto

    2016-01-01

    The recently acquired genome sequence of globe artichoke (Cynara cardunculus var. scolymus) has been used to catalog the genome's content of simple sequence repeat (SSR) markers. More than 177,000 perfect SSRs were revealed, equivalent to an overall density across the genome of 244.5 SSRs/Mbp, but some 224,000 imperfect SSRs were also identified. About 21% of these SSRs were complex (two stretches of repeats separated by density across the gene space of 32,5 and 44,9 SSRs/Mbp for perfect and imperfect motifs, respectively. A putative function has been assigned, using the gene ontology approach, to the set of genes harboring at least one SSR. The same search parameters were applied to reveal the SSR content of 14 other plant species for which genome sequence is available. Certain species-specific SSR motifs were identified, along with a hexa-nucleotide motif shared only with the other two Compositae species (sunflower (Helianthus annuus) and horseweed (Conyza canadensis)) included in the study. Finally, a database, called "Cynara cardunculus MicroSatellite DataBase" (CyMSatDB) was developed to provide a searchable interface to the SSR data. CyMSatDB facilitates the retrieval of SSR markers, as well as suggested forward and reverse primers, on the basis of genomic location, genomic vs genic context, perfect vs imperfect repeat, motif type, motif sequence and repeat number. The SSR markers were validated via an in silico based PCR analysis adopting two available assembled transcriptomes, derived from contrasting globe artichoke accessions, as templates.

  1. Structural Transitions and Energy Landscape for Cowpea Chlorotic Mottle Virus Capsid Mechanics from Nanomanipulation in Vitro and in Silico

    Science.gov (United States)

    Kononova, Olga; Snijder, Joost; Brasch, Melanie; Cornelissen, Jeroen; Dima, Ruxandra I.; Marx, Kenneth A.; Wuite, Gijs J.L.; Roos, Wouter H.; Barsegov, Valeri

    2013-01-01

    Physical properties of capsids of plant and animal viruses are important factors in capsid self-assembly, survival of viruses in the extracellular environment, and their cell infectivity. Combined AFM experiments and computational modeling on subsecond timescales of the indentation nanomechanics of Cowpea Chlorotic Mottle Virus capsid show that the capsid’s physical properties are dynamic and local characteristics of the structure, which change with the depth of indentation and depend on the magnitude and geometry of mechanical input. Under large deformations, the Cowpea Chlorotic Mottle Virus capsid transitions to the collapsed state without substantial local structural alterations. The enthalpy change in this deformation state ΔHind = 11.5–12.8 MJ/mol is mostly due to large-amplitude out-of-plane excitations, which contribute to the capsid bending; the entropy change TΔSind = 5.1–5.8 MJ/mol is due to coherent in-plane rearrangements of protein chains, which mediate the capsid stiffening. Direct coupling of these modes defines the extent of (ir)reversibility of capsid indentation dynamics correlated with its (in)elastic mechanical response to the compressive force. This emerging picture illuminates how unique physico-chemical properties of protein nanoshells help define their structure and morphology, and determine their viruses’ biological function. PMID:24138865

  2. Carnation mottle virus, an important viral agent infecting carnation cut-flower crops in Mahallat of Iran.

    Science.gov (United States)

    Safari, M; Koohi Habibi, M; Mosahebi, G; Dizadji, A

    2009-01-01

    One of the most important cut-flower crops grown worldwide on commercial scale is Carnation (Dianthus caryophyllus L.). It's the main production of Mahallat where is one of the most important ornamental plants production centers of Iran. Infection of carnation with pathogens Like viral agents causes economic losses in carnation cut-flower crop. One of the viral agents of this flower is Carnation mottle virus (CarMV) which is the type member of genus Carmovirus and belongs to the Tombusviridae family. It is naturally transmitted by grafting and contacting between plants. Although its infection lead to mild symptims, it weakens the plant to infection by other pathogens. The carnation greenhouses of Mahallat were visited during 2008 January to April and 100 samples with mild mosaic symptom were collected and tested by DAS-ELISA using CarMV specific polyclonal antibody. The results showed that 75% of samples wrere infected with this virus. Mechanical inocubation of Chenopodium quinoa, C. amaranticolor and Spinacea oleracea with extracted crude sap of CarMV infected carnation Leaves in phosphate buffer (pH, 7) resulted in appearance of chlorotic and necrotic local lesions on inoculated leaves 4-7 days after incubation. The virus was partially purified using C. amaranticolor locally symptomatic leaves. Total soluble proteins were extracted from healthy and CarMV infected C. amaranticolor plants and beside partially purified preparation electrophoresed through 15% poly acrylamide get according to SDS-PAGE standard procedure. Protein bands were electroblotted onto nitrocelluse membrane and incubated with CarMV polyclonal during western immunoblot analysis according to standard method. The result revealed a distinc protein band with Mr of 35.5 kDa in total protein preparation of infected plant and viral partial pure preparation, without any reaction in those of healthy plant. RT-PCR carried out using total RNA extracted from infected plant by Rneasy Plant Mini Kit (Qiagen

  3. 江苏黄瓜绿斑驳花叶病毒的鉴定%Identification of cucumber green mottle mosaic virus in Jiangsu

    Institute of Scientific and Technical Information of China (English)

    任春梅; 程兆榜; 缪倩; 王锋; 张重阳; 徐冬青; 周益军

    2013-01-01

    为确定从江苏省洪泽县大棚西瓜、仪征市露地瓠瓜、东台市露地南瓜上采集到3个表现为褪绿、斑驳花叶症状的病样是否为黄瓜绿斑驳花叶病毒(CGMMV)侵染,采用电子镜观察、RT-PCR和序列测定方法对其进行鉴定.电子显微镜下可见300 nm×18 nm大小的直杆状病毒粒子.根据已报道的CGMMV外壳蛋白质(cp)基因序列合成特异性引物,对所提取病样的总RNA进行RT-PCR扩增,3个分离物的RNA模板中均可扩增到大小为500bp左右的DNA片段,测序结果表明3个分离物的片段均含有486个核苷酸,包含完整的cp基因,编码161个氨基酸.3个分离物与已报道的7个CGMMV分离物核苷酸及其所推导的氨基酸序列同源性分别为91.8% ~99.8%和98.1%~100.0%,与同属的其他3个病毒(Kyuri绿斑驳花叶病毒、黄瓜果实斑驳花叶病毒和小西葫芦绿斑驳花叶病毒)cp基因核苷酸及其所推导的氨基酸序列同源性分别为40.7%~ 54.7%和44.4% ~60.2%,表明所采集的3个病样由CGMMV侵染引起.%This study was performed to identify three isolates with chlorisis and mottle mosaic symptom collected from greenhouse watermelon in Hongze of Jiangsu, openground gourd in Yizheng of Jiangsu and openground pumpkin in Dongtai of Jiangsu. Straight rod virus particles with size of 300 nm×18 nm were shown under the electron micrograph in the crude extract of above isolates. Total RNA were amplified by RT-PCR with the specific primers designed on the basis of the reported coat protein ( cp) gene of cucumber green mottle mosaic virus( CGMMV) . An 500-bp gene fragment was amplified from total RNA of all three isolates, and subsequent sequence analysis indicated that the 486 bp fragment contained complete cp gene which encoded 161 amino acids. The nucleotides and deduced amino acid sequences of the cp genes from these isolates shared homologies from 91. 8% to 99. 8% and from 98. 1% to 100. 0% with 7 reported CGMMV

  4. A 2014 nationwide survey of the distribution of Soybean mosaic virus (SMV), Soybean yellow mottle mosaic virus (SYMMV) and Soybean yellow common mosaic virus (SYCMV) major viruses in South Korean soybean fields, and changes

    Science.gov (United States)

    In 2014 symptomatic soybean samples were collected throughout Korea, and were tested for the most important soybean viruses found in Korea, namely Soybean mosaic virus (SMV), Soybean yellow common mosaic virus (SYCMV), and Soybean yellow mottle mosaic virus (SYMMV). SYMMV was most commonly detected,...

  5. The full-length clone of cucumber green mottle mosaic virus and its application as an expression system for Hepatitis B surface antigen.

    Science.gov (United States)

    Ooi, Aikseng; Tan, Sianghee; Mohamed, Rosmawati; Rahman, Noorsaadah Abdul; Othman, Rofina Yasmin

    2006-02-24

    A cucumber green mosaic mottle virus (CGMMV) full-length clone was developed for the expression of Hepatitis B surface antigen (HBsAg). The expression of the surface displayed HBsAg by the chimeric virus was confirmed through a double antibody sandwich ELISA. Assessment of the coat protein composition of the chimeric virus particles by SDS-PAGE analysis showed that 50% of the coat proteins were fused to the HBsAg. Biological activity of the expressed HBsAg was assessed through the stimulation of in vitro antibody production by cultured peripheral blood mononuclear cells (PBMC). PBMC that were cultured in the presence of the chimeric virus showed up to an approximately three-fold increase in the level of anti HBsAg immunoglobulin thus suggesting the possible use of this new chimeric virus as an effective Hepatitis B vaccine.

  6. Comparison of three magnetic-bead-based RNA extraction methods for detection of cucumber green mottle mosaic virus by real-time RT-PCR.

    Science.gov (United States)

    Zhao, Xiaoli; Zhou, Qi; Zhang, Lijie; Yan, Wenlong; Sun, Ning; Liang, Xinmiao; Deng, Congliang

    2015-07-01

    To determine the efficiency of RNA extraction methods based on magnetic beads, three different bead-based methods (one using silica-coated magnetic beads [SMNP], one using immunomagnetic beads conjugated to a specific antibody [IMB], and one using magnetic beads to nonspecifically adsorb virions [MNP]) were compared with the TRIzol method for the extraction of cucumber green mottle mosaic virus (CGMMV) RNA from cucumber leaves by real-time RT-PCR. The results indicated that the extraction efficiency of the SMNP method was 10 times higher than those of the IMB and MNP methods and 100 times higher than that of the TRIzol method. Therefore, the SMNP method could be considered for use in quarantine measures for the prevention and control of the disease caused by CGMMV.

  7. An overview of researches on Jerusalem artichoke as a biofuel crop%菊芋作为能源植物的研究进展

    Institute of Scientific and Technical Information of China (English)

    刘祖昕; 谢光辉

    2012-01-01

    Non-food biofuel crop is under the spotlight in the research field of bioenergy.Jerusalem artichoke is one of the most promising non-food biofuel crops,due to its wide adaptability,high resistance,high biomass productivity,multiple ways of utilization for bioenergy and environment friendly.This paper reviews the recent development and problems in research in biology characteristics,stress resistance and yield potential,germplasm evaluation,genetic characteristics and cultivar breeding,planting technology,chemical composition and energy conversion on the basis of feedstock production and biomass conversion utilization.It discusses the prospects of research and development of Jerusalem artichoke as an energy crop.Specific cultivar for bioenergy,efficient feedstock production system suited for bioenergy plants,searching for inulinase with high activity,efficient fermentation strains,oleaginous microorganisms,life cycle assessment of feedstock production,and comprehensive research and development of byproducts should be focused.%非粮能源植物是发展生物质能源的重要基础。菊芋适应性广,抗逆性强,生物质产量高,能源化利用方式多样,且环境友好,是我国有前景的非粮能源植物之一。笔者以原料生产和生物质转化利用为中心,对菊芋生物学、抗逆性和产量潜力、种质资源、遗传特性和良种选育、种植技术、化学组成和能源转化利用等方面的研究进展和存在问题进行了详细阐述,并展望了菊芋作为能源植物的研发前景。培育能源专用良种,建立适应能源生产的高效生产技术体系、获得高活力菊糖酶、高效发酵菌株和产油微生物,原料生产全生命周期评价及副产物综合开发利用是今后应着力研究的重点。

  8. 响应面法优化菊芋菊糖的提取工艺%Response Surface Methodology for Optimizing Extraction of Inulin from Jerusalem Artichoke

    Institute of Scientific and Technical Information of China (English)

    李峰; 陈帅; 晏敏; 闫彬; 许程剑

    2015-01-01

    The method of heat leaching was used to extract inulin from jerusalem artichoke to improve the utilization rate,in which respones surface analysis was used to optimize extraction conditions. Based on the single factor experiments,the Central Composite design principles and Design-Expert.8.05 data ananlysis software were used to select three parameters of response surface design to optimize extraction process. The result showed the optimize extraction conditions:extraction time 50 min,extraction temperature 84℃,liquid to solid ratio 35,the extraction value was 89.26%.%为了提高菊芋菊糖的提取率,本文采用热浸提法对菊芋进行处理,并通过响应面法优化提取条件。在单因素实验的基础上,依据Central Composite中心组合设计原理,采用Design-Expert.8.05数据分析软件,对菊糖提取进行了三因素三水平的优化分析。确立最佳提取条件:浸提时间50min,浸提温度84益,液料比35,在此条件下蛋白质的提取理论值达到89.26%。

  9. Alkali-based pretreatments distinctively extract lignin and pectin for enhancing biomass saccharification by altering cellulose features in sugar-rich Jerusalem artichoke stem.

    Science.gov (United States)

    Li, Meng; Wang, Jun; Yang, Yuezhou; Xie, Guanghui

    2016-05-01

    Jerusalem artichoke (JA) has been known as a potential nonfood feedstock for biofuels. Based on systems analysis of total 59 accessions, both soluble sugar and ash could positively affect biomass digestibility after dilute sodium hydroxide pretreatment (A). In this study, one representative accession (HEN-3) was used to illustrate its enzymatic digestibility with pretreatments of ultrasonic-assisted dilute sodium hydroxide (B), alkaline peroxide (C), and ultrasonic-assisted alkaline peroxide (D). Pretreatment D exhibited the highest hexose release rate (79.4%) and total sugar yield (10.4 g/L), which were 2.4 and 2.6 times higher, respectively, than those of the control. The analysis of cellulose crystalline index (CrI), cellulose degree of polymerization (DP), thermal behavior and SEM suggested that alkali-based pretreatments could distinctively extract lignin and pectin polymers, leading to significant alterations of cellulose CrI and DP for high biomass saccharification. Additionally, hydrogen peroxide (H2O2) could significant reduce the generation of fermentation inhibitors during alkali-based pretreatments.

  10. Effect of temperature and pH on ethanol production by free and immobilized cells of Kluyveromyces marxianus grown on Jerusalem artichoke extract

    Energy Technology Data Exchange (ETDEWEB)

    Bajpai, P.; Margaritis, A.

    1987-01-01

    The effect of temperature and pH on the kinetics of ethanol production by free and calcium alginate immobilized cells of Kluyveromyces marxianus grown on Jerusalem artichoke extract was investigated. With the free cells, the ethanol and biomass yields were relatively constant over the temperature range 25-35 degrees C, but dropped sharply beyond 35 degrees C. Other kinetic parameters, specific growth rate, specific ethanol production rate, and specific total sugar uptake rate were maximum at 35 degrees C. However, with the immobilized cells, ethanol yield remained almost constant in the temperatue range 25-45 degrees C, and the specific ethanol production rate and specific total sugar uptake rate attained their maximum values at 40 degrees C. For the pH range between 3 and 7, the free-cell optimum for growth and product formation was found to be circa pH 5. At this pH, the specific growth rate was 0.35/h and specific ethanol production rate was 2.83 g/g/h. At values higher or lower than pH 5, a sharp decrease in specific ethanol production rate as well as specific growth rate was observed. In comparison, the immobilized cells showed a broad optimum pH profile. The best ethanol production rates were observed between pH 4 and 6. (Refs. 22).

  11. Ethanol production from Jerusalem artichoke tubers at high temperature by newly isolated thermotolerant inulin-utilizing yeast Kluyveromyces marxianus using consolidated bioprocessing.

    Science.gov (United States)

    Charoensopharat, Kanlayani; Thanonkeo, Pornthap; Thanonkeo, Sudarat; Yamada, Mamoru

    2015-07-01

    Thermotolerant inulin-utilizing yeast strains were successfully isolated in this study. Among the isolated strains, Kluyveromyces marxianus DBKKU Y-102 was found to be the most effective strain for direct ethanol fermentation at high temperature from fresh Jerusalem artichoke (JA) tubers without inulin hydrolysis under consolidated bioprocessing (CBP). The maximum ethanol concentrations produced by this strain under the optimum culture conditions were 104.83 and 97.46 g L(-1) at 37 and 40 °C, respectively. Data from this study clearly demonstrated that the use of thermotolerant inulin-utilizing yeast K. marxianus for ethanol production from fresh JA tubers in the CBP process not only provided high levels of ethanol, but also could eliminate the addition of external enzyme for inulin hydrolysis, which might lead to the reduction of operating costs. The expression of genes involved in carbohydrate metabolism in K. marxianus DBKKU Y-102 during ethanol fermentation was investigated by real-time RT-PCR, and the results revealed that expression levels were distinctive depending on the growth phase and growth conditions. However, among the genes tested, adh4 and tdh2 were highly expressed under high temperature conditions in both exponential- and stationary-growth phases, suggesting that these genes might play a crucial role in acquiring thermotolerance ability in this organism under stress conditions.

  12. Selective production of 1,2-propylene glycol from Jerusalem artichoke tuber using Ni-W(2) C/AC catalysts.

    Science.gov (United States)

    Zhou, Likun; Wang, Aiqin; Li, Changzhi; Zheng, Mingyuan; Zhang, Tao

    2012-05-01

    A series of Ni-promoted W(2) C/activated carbon (AC) catalysts were investigated for the catalytic conversion of Jerusalem artichoke tuber (JAT) under hydrothermal conditions and hydrogen pressure. Even a small amount of Ni could greatly promote the conversion of JAT to 1,2-propylene glycol (1,2-PG), whereas the pure W(2) C/AC catalyst resulted in the selective formation of acetol. The product distribution profiles involving the reaction temperature, time, and H(2) pressure indicated that 1,2-PG formed as a result of acetol hydrogenation, which was catalyzed by Ni. Thus, there was a synergy between W(2) C and Ni, and the best performance yielded 38.5% of 1,2-PG over a 4%Ni-20%W(2) C/AC catalyst at 245°C, 6 MPa H(2) , and 80 min. To understand the reaction process, some important intermediates, such as inulin, fructose, acetol, glyceraldehyde, and 1,3-dihydroxyacetone, were used as the feedstock. Based on the product distributions derived from these intermediates, a reaction pathway was proposed, where JAT was first hydrolyzed into a mixture of fructose and glucose under the catalysis of H(+) , then the sugars underwent a retro-aldol reaction followed by hydrogenation catalyzed by Ni-W(2) C.

  13. 菊芋预处理及菊糖提取工艺优化的研究%Pretreatment from Jerusalem Artichoke and Optimizing of Extraction Techniques on Inulin

    Institute of Scientific and Technical Information of China (English)

    宋含; 王家林

    2013-01-01

    Jerusalem artichoke tubers contain very rich inulin, inulin is an important health functions, in recent years, their effectiveness is perceived by people. This study provides a theoretical basis for industrial production, to seek suitable for industrial production of process conditions. Jerusalem artichoke tubers as raw materials in order to determine the enzyme inactivation blanching 65℃ drying pretreatment; using single factor and orthogonal experi-mental design experimental design methods, extraction temperature, extraction time, solid-liquid ratio, extraction times four factors research. The results showed that: artichoke inulin hot water extraction of optimum extraction conditions were: temperature 60℃, solid-liquid ratio 1∶25, extraction time 60min, extraction times a second.%  菊芋茎块中含有非常丰富菊糖,菊糖是具有重要的保健功能,近年来其功效被人们所认知。本研究为工业化大生产提供理论依据,寻求适合工业化生产的工艺条件。以菊芋茎块为原料,确定了热烫灭酶65℃烘干的预处理工艺;采用单因素试验设计和正交试验设计方法,对提取温度、提取时间、料液比、提取次数4个因素进行研究。结果表明:菊芋菊糖热水浸提的最佳提取工艺条件为:温度60℃、料液比1∶25、浸提时间60min、提取次数为1次。

  14. Complete nucleotide sequences and construction of full-length infectious cDNA clones of cucumber green mottle mosaic virus (CGMMV) in a versatile newly developed binary vector including both 35S and T7 promoters.

    Science.gov (United States)

    Park, Chan-Hwan; Ju, Hye-Kyoung; Han, Jae-Yeong; Park, Jong-Seo; Kim, Ik-Hyun; Seo, Eun-Young; Kim, Jung-Kyu; Hammond, John; Lim, Hyoun-Sub

    2017-04-01

    Seed-transmitted viruses have caused significant damage to watermelon crops in Korea in recent years, with cucumber green mottle mosaic virus (CGMMV) infection widespread as a result of infected seed lots. To determine the likely origin of CGMMV infection, we collected CGMMV isolates from watermelon and melon fields and generated full-length infectious cDNA clones. The full-length cDNAs were cloned into newly constructed binary vector pJY, which includes both the 35S and T7 promoters for versatile usage (agroinfiltration and in vitro RNA transcription) and a modified hepatitis delta virus ribozyme sequence to precisely cleave RNA transcripts at the 3' end of the tobamovirus genome. Three CGMMV isolates (OMpj, Wpj, and Mpj) were separately evaluated for infectivity in Nicotiana benthamiana, demonstrated by either Agroinfiltration or inoculation with in vitro RNA transcripts. CGMMV nucleotide identities to other tobamoviruses were calculated from pairwise alignments using DNAMAN. CGMMV identities were 49.89% to tobacco mosaic virus; 49.85% to pepper mild mottle virus; 50.47% to tomato mosaic virus; 60.9% to zucchini green mottle mosaic virus; and 60.96% to kyuri green mottle mosaic virus, confirming that CGMMV is a distinct species most similar to other cucurbit-infecting tobamoviruses. We further performed phylogenetic analysis to determine relationships of our new Korean CGMMV isolates to previously characterized isolates from Canada, China, India, Israel, Japan, Korea, Russia, Spain, and Taiwan available from NCBI. Analysis of CGMMV amino acid sequences showed three major clades, broadly typified as 'Russian,' 'Israeli,' and 'Asian' groups. All of our new Korean isolates fell within the 'Asian' clade. Neither the 128 nor 186 kDa RdRps of the three new isolates showed any detectable gene silencing suppressor function.

  15. Identification of Watermelon silver mottle virus infecting watermelon in Yunnan%云南西瓜银灰斑驳病毒病害的鉴定

    Institute of Scientific and Technical Information of China (English)

    尹跃艳; 卢训; 李婷婷; 李红祥; 郭淼; 赵丽玲; 张晓云; 丁铭

    2016-01-01

    应用DAS-ELISA和RT-PCR方法从褪绿和银色斑驳的西瓜叶片中检测到病毒分离物(WSMoV-YN),感病样品能与WSMoV/GBNV复合抗血清(Agdia)呈阳性反应.获得WSMoV N蛋白的多克隆抗体,抗体能与WSMoV血清组成员CaCV和TZSV反应,但不能与INSV、TSWV、HCRV和GYSV反应.为明确引起该病害的病毒种类,采用Tospovirus通用引物对样品的总RNA进行RT-PCR扩增,获得长度为3 554 nt的S RNA全序列,经Blastn比对分析与WSMoV中国台湾分离物同源性最高,为95.8%,其N和NSs蛋白氨基酸序列同源性分别为99%和97.6%.构建系统进化树发现,西瓜银灰斑驳病毒云南分离物(WSMoV-YN)与其他WSMoV聚为一支.确定引起云南西瓜病害的病毒为WSMoV.%Using DAS-ELISA and RT-PCR,a viral isolate (WSMoV-YN) was detected in watermelon showing chlorotic and silver mottle.Diseased samples were positive for antibodies to Watermelon silver mottle virus (WSMoV) and Groundnut bud necrosis virus (GBNV) (Agdia,USA).The polyclonal antiserum of N protein were obtained and could react with Capsicum chlorosis virus (CaCV) and Tomato zonate spot virus (TZSV),the members of Watermelon silver mottle virus (WSMoV) serogroup,but not react with Impatiens necrotic spot virus (INSV),Tomato spotted wilt virus (TSWV),Hippeastrum chlorotic ringspot virus (HCRV) and Groundnut yellow spot virus (GYSV).To further confirm the presence of WSMoV,the samples were examined by RTPCR using tospovirus universal primer pairs.Full-length sequence of WSMoV-YN S RNA with a length of 3 554 nt was obtained and sequence alignment indicated that WSMoV-YN shares 95.8% identity with WSMoV isolates from Taiwan,China (NC_003843) at the nucleotide level.The nucleocapsid protein (N) and non-structual (NSs) shared 99% and 97.6% amion acid identity with the Taiwan (China) isolates,respectively.Taken together,our results suggested that the WSMoV-YN formed a distinct cluster with the other WSMoV isolates.

  16. Identification and control measures of cucumber green mottle mosaic virus in Shanghai suburbs%上海郊区黄瓜绿斑驳花叶病毒的鉴定和防治对策

    Institute of Scientific and Technical Information of China (English)

    胡亚萍; 董萍; 赵驾浩; 张艇; 于子翔; 于翠; 杨翠云

    2013-01-01

    在上海市浦东新区孙桥蔬菜基地温室内发现大量黄瓜植株发病,叶片出现花叶、斑驳、皱缩和变形等症状,发病率达50%以上.经DAS-ELISA、RT-PCR和摩擦接种试验鉴定,发现引起黄瓜发病的病原生物是黄瓜绿斑驳花叶病毒(Cucumber green mottle mosaic virus),并提出了防治对策.%It was found that a large quantity of cucumber plants in the Sunqiao Vegetables Base' s greenhouses had mosaic,mottle,shrinking and deformation symptoms on leaves and the disease incidence was over 50%.The DAS-ELISA,RT-PCR and biological inoculation tests for them showed that the pathogen of the diseased plants was cucumber green mottle mosaic virus (CGMMV). It was the first time to find this quarantine virus in Shanghai suburbs,and some control measures were proposed.

  17. Research progress in management of Cucumber green mottle mosaic virus%黄瓜绿斑驳花叶病毒病防治研究进展

    Institute of Scientific and Technical Information of China (English)

    刘华威; 罗来鑫; 朱春雨; 梁超琼; 刘鹏飞; 李健强

    2016-01-01

    黄瓜绿斑驳花叶病毒(Cucumber green mottle mosaic virus ,CGMMV)主要危害葫芦科作物,已被世界上许多国家和地区列为检疫性有害生物。CGMMV 目前在我国23个省、市、区已有报道发生和危害,严重影响葫芦科作物的生产;近年来该病害在国内外呈现迅猛扩展的趋势并对生产造成危害。本文综述了防治该病害的种子处理、化学及生物防治、嫁接以及转基因等分子生物学方法;分析了 CGMMV 与寄主黄瓜互作研究的最新进展,对小分子RNA 参与调控寄主对 CGMMV 病毒的防控策略提出了展望,并概述了下一代测序技术、基因编辑技术在植物新病毒的检测、鉴定以及培育抗病新品种等方面的应用。%Cucumber green mottle mosaic virus (CGMMV)causes devastating disease on cucurbits,and it has been listed as quarantine pathogen in many countries in the world.It was reported in at least 23 provinces in China, causing substantial yield losses and lower market value of cucurbits.This review summarized the current control methods of CGMMV and tried to explore the novel control strategies,including next-generation sequencing (NGS)and gene-editing technology for viral diagnostics and identification,and miRNA mediated-resistance to CGMMV infection.

  18. The effects of inulin, dried Jerusalem artichoke tuber and a multispecies probiotic preparation on microbiota ecology and immune status of the large intestine in young pigs.

    Science.gov (United States)

    Barszcz, Marcin; Taciak, Marcin; Skomiał, Jacek

    2016-08-01

    The study aimed at determining the effect of two types of prebiotics and a multispecies probiotic on microbiota activity and composition, as well as mucosal immunity in the large intestine of young pigs. In total 48 piglets were divided into 6 groups (n = 8), which received from day 10 of life probiotic-unsupplemented (PU) or probiotic-supplemented (PS) diets. Probiotics were added at 0.5 g/kg diet and contained: Lactococcus lactis, Carnobacterium divergens, Lactobacillus casei, Lactobacillus plantarum and Saccharomyces cerevisiae. The PU and PS diets were formulated without prebiotic addition (control) or with addition of 2% of inulin from chicory root (IN) or 4% of dried Jerusalem artichoke tubers (DJA). After 40 days of feeding, digesta and tissue samples were taken from the caecum and three sections of the colon for analyses of microbiota activity and composition, secretory immunoglobulin A (sIgA) and intraepithelial lymphocytes (IEL). IN diets decreased the caecal digesta pH and β-glucosidase activity but increased propionic, valeric and total short chain fatty acid (SCFA) concentrations compared to control diets. Feeding DJA diets increased caecal valeric acid level, decreased the concentration of isoacids in the colon, reduced β-glucosidase and β-glucuronidase activity in the middle colon and increased Bifidobacterium spp. populations in the proximal and distal colon. PS diets increased the caecal acetic acid and total SCFA level, and Clostridium spp. populations in the distal colon. Neither probiotic nor prebiotics affected sIgA level or IEL number in the large intestine. In conclusion, DJA modified the microbiota ecology in the large intestine of young pigs to a greater extent than IN and the applied probiotic did not enhance effects of prebiotics.

  19. Comparison of Different Inulin Extraction Technologies from Jerusalem artichoke%菊芋中菊粉不同提取工艺比较研究

    Institute of Scientific and Technical Information of China (English)

    胡建锋; 邱树毅

    2009-01-01

    Three extraction methods including conventional water extraction, ultrasonic recycle extraction and microwave extraction method were tested to extract inulin from Jerusalem artichoke. The results showed that the optimum condition of the conventional water extraction method was 60℃, 40 min and 1 : 30 raw material/solution ratio, the optimum condition of the ultrasonic recycle extraction method was 600 W and 1 : 20 raw material/solution ratio and the optimum condition of the microwave extraction method was 700 W, 8 min and 1 :15 raw material/solution ratio. The inulin extraction rate of the conventional water extraction method, ultrasonic recycle extraction method and microwave extraction method was 75.68%, 82.16% and 87.81% respectively and the inulin extraction rate of the microwave extraction method was the highest among three extraction methods.%采用常规水浴浸提法、超声波循环提取法、微波提取法提取菊芋中菊粉,结果表明:常规提取法的最佳条件为温度60℃,时间50min,料液比为1:30;超声提取法的最佳条件为温度60℃,时间40min,超声功率600W,料液比为1:20;微波提取法的最佳条件为微波处理8min,微波功率700W,料液比为1:15.常规水浴浸提法、超声波循环提取法和微波提取法的菊粉得率分别达75.68%、82.16%和87.81%.以微波提取法的菊粉得率最高.

  20. 菊芋生产菊糖关键技术研究%Study on the Key Technologies of Jerusalem artichoke Inulin Production

    Institute of Scientific and Technical Information of China (English)

    王启为

    2011-01-01

    [Objective] The aim was to study the key techniques on purification and decoloration from the process of producing inulin, in order to gain the high quality product. [ Method] The purification effects of salt out method, enzyme decompounding method and lime milk removing method were compared. The optimum purification method and decolorization technique were determined by compared active carbon decoloriza-tion and combination ion exchange decolorization method. [ Result J The impurities in inulin extract were removed effectively by lime milk method, then disposed by the combination of ion exchange, the content of total sugar was 94. 8%. The transparency concentrated inulin extract was more than 95% .according with the quality of product. [ Conclusion] The study will provide a feasible approach for mass production technique of J. Artichoke producing inulin.%[目的]研究菊芋生产菊糖中去除杂质和脱色的关键技术,获得高品质的菊糖.[方法]通过盐析沉淀法、酶解法和加灰充碳法比较去除杂质效果;对活性炭脱色及组合离子交换脱色方法进行比较,确定最佳去除杂质方法和最佳脱色工艺.[结果]菊芋提取液经加灰充碳法去除杂质效果最好,再经组合离子交换脱色,总糖收率为94.8%,浓缩液透光率95%,符合产品要求.[结论]该研究结果为菊芋生产菊糖的产业化工艺提供了一条可行的途径.

  1. Production of ethanol from Jerusalem artichoke flour by simultaneous saccharification and fermentation%同步糖化发酵菊芋生产酒精

    Institute of Scientific and Technical Information of China (English)

    张超; 王静; 唐波; 李奇建

    2016-01-01

    Mycelial pellets formed by Aspergillus niger A⁃15 were used to immobilize the alcohol producing yeast Saccharomyces cerevisiae C⁃15. The operated factors, such as agitation speed, temperature and mixed proportion of strains were studied. The optimal adsorption 66�9% was obtained when speed was 80 r/min, temperature was 40℃ and mixed proportion was 1∶10. With Jerusalem artichoke flour as substrate,12�8%( V/V) of ethanol was produced within 48 h of fermentation by simultaneous saccharification and fermentation using mycelial pellets at 30℃. And mycelial pellets could tolerate 19%(volume fraction) alcohol.%以黑曲霉A 15形成的菌丝球作为载体对酿酒酵母C 15进行固定化,研究各种因素对黑曲霉A 15菌丝球吸附率的影响。结果表明:在40℃、80 r/min、菌种个数混合比例为1∶10时,菌丝球对酵母的吸附可达到66�9%;以菊粉为底物,利用混合菌丝球进行同步糖化与发酵,30℃发酵48 h,发酵醪酒精体积分数达到12�8%,并且混合菌丝球可以耐受19%的酒精。

  2. Effects of Artichoke (Cynara scolymus L. Leaf Meal and Vitamin E on Productive Performance, Intestinal Microflora and Morphology in Japanese Quail

    Directory of Open Access Journals (Sweden)

    Samadi F

    2015-06-01

    Full Text Available A total of 240, one-day-old quail chicks (Coturnix coturnix japonica were used to study the effects of Artichoke leaf meal (ALM and vitamin E in diet on growth performance, ileal microbial populations and intestinal morphology in a 42-d trial. This experiment was performed as a completely randomized design with 4 replicates of 15 quails each, using a 4 × 2 factorial arrangement with diet and gender as the main effects. Four dietary treatments were formulated by addition of 2 levels (1.5 and 3 percent of ALM and 300 mg/Kg vitamin E to the basal diet. Supplementing basal diet with ALM did not improve growth performance at different rearing periods, whereas dietary vitamin E increased feed intake and body weight gain at day 21 of age (P. The ileal populations of lactobacillus and coliforms was not affected by dietary ALM treatments, whereas vitamin E increased the population of total aerobic bacteria (P≤0.04. The ileal villus height (P≤0.01 and crypt depth (P≤0.008 were reduced in quails fed on diets with ALM and vitamin E. The quails fed diets containing 3 percent ALM and 300 mg/Kg vitamin E had higher villus height:crypt depth ratio. The thickness of muscularies (P≤0.04 and mucosa (P≤0.0007 layers were decreased in birds fed diets containing ALM than control birds. Birds treated with ALM and vitamin E showed a shorter intestinal length (P≤0.02 and a lower pancereas relative weight. The results of this study showed that supplementing diet by ALM (1.5 and 3% and 300 mg/Kg vitamin E did not improve growth performance, ileal microbiota pupolations and intestinal morphometric indices in Japanese quail.

  3. A double-blind, placebo-controlled, cross-over study to establish the bifidogenic effect of a very-long-chain inulin extracted from globe artichoke (Cynara scolymus) in healthy human subjects.

    Science.gov (United States)

    Costabile, Adele; Kolida, Sofia; Klinder, Annett; Gietl, Eva; Bäuerlein, Michael; Frohberg, Claus; Landschütze, Volker; Gibson, Glenn R

    2010-10-01

    There is growing interest in the use of inulins as substrates for the selective growth of beneficial gut bacteria such as bifidobacteria and lactobacilli because recent studies have established that their prebiotic effect is linked to several health benefits. In the present study, the impact of a very-long-chain inulin (VLCI), derived from globe artichoke (Cynara scolymus), on the human intestinal microbiota compared with maltodextrin was determined. A double-blind, cross-over study was carried out in thirty-two healthy adults who were randomised into two groups and consumed 10 g/d of either VLCI or maltodextrin, for two 3-week study periods, separated by a 3-week washout period. Numbers of faecal bifidobacteria and lactobacilli were significantly higher upon VLCI ingestion compared with the placebo. Additionally, levels of Atopobium group significantly increased, while Bacteroides-Prevotella numbers were significantly reduced. No significant changes in faecal SCFA concentrations were observed. There were no adverse gastrointestinal symptoms apart from a significant increase in mild and moderate bloating upon VLCI ingestion. These observations were also confirmed by in vitro gas production measurements. In conclusion, daily consumption of VLCI extracted from globe artichoke exerted a pronounced prebiotic effect on the human faecal microbiota composition and was well tolerated by all volunteers.

  4. Rapid detection of Piper yellow mottle virus and Cucumber mosaic virus infecting black pepper (Piper nigrum) by loop-mediated isothermal amplification (LAMP).

    Science.gov (United States)

    Bhat, A I; Siljo, A; Deeshma, K P

    2013-10-01

    The loop-mediated isothermal amplification (LAMP) assay for Piper yellow mottle virus and the reverse transcription (RT) LAMP assay for Cucumber mosaic virus each consisted of a set of five primers designed against the conserved sequences in the viral genome. Both RNA and DNA isolated from black pepper were used as a template for the assay. The results were assessed visually by checking turbidity, green fluorescence and pellet formation in the reaction tube and also by gel electrophoresis. The assay successfully detected both viruses in infected plants whereas no cross-reactions were recorded with healthy plants. Optimum conditions for successful amplification were determined in terms of the concentrations of magnesium sulphate and betaine, temperature, and duration. The detection limit for both LAMP and RT-LAMP was up to 100 times that for conventional PCR and up to one-hundredth of that for real-time PCR. The optimal conditions arrived at were validated by testing field samples of infected vines of three species from different regions.

  5. 香石竹斑驳病毒(CarMV)的研究进展%Research Progress of Carnation mottle Virus(CarMV)

    Institute of Scientific and Technical Information of China (English)

    佟爱仔; 孔宝华; 陈海如

    2011-01-01

    Carnation mottle virus (CarMV) is a very important virus infecting carnation, CarMV severely affect the yield and quality of the fresh carnation and affect the economic value and import and export trade. A large amount of studies has been reported till now, in order to study CarMV systematically, in this paper the research progress of CarMV was proposed from aspects of etiology, serology, molecular biology, occurrence, detection and prevention and cure methods of CarMV disease.%香石竹斑驳病毒(CarMV)是侵染香石竹的主要病毒之一,严重影响香石竹切花产量与品质,影响其经济价值和进出口贸易.目前对香石竹斑驳病毒已有大量研究,为系统了解该病毒,笔者从CarMV的病原学、血清学和分子生物学,CarMV病害发生与检测及CarMV防治方法等方面综述了CarMV的研究现状.

  6. Effect of 5' and 3' terminal sequences, overall length, and coding capacity on the accumulation of defective RNAs associated with broad bean mottle bromovirus in planta.

    Science.gov (United States)

    Pogany, J; Romero, J; Bujarski, J J

    1997-02-17

    Broad bean mottle bromovirus (BBMV) was shown to accumulate RNA2-derived defective interfering (DI) RNAs [Romero et al., Virology 194, 576-584 (1993); Pogany et al., Virology 212, 574-586 (1995)]. In this work, we utilize three sets of BBMV RNA2-derived artificial DI RNA constructs to determine factors that affect the accumulation of defective RNAs in planta. One set of deletion constructs was used to localize sequences required for efficient accumulation within the 5' 883 nt and the 3' 387 nt of the DI RNAs. The second set had a gradually increasing size of 3' nested deletions to determine the minimal length required for efficient DI RNA accumulation. The smallest DI RNA still accumulating in plants was found to be 1712 nt long. The third set consisted of frameshift mutants which showed that at least 64.4% of BBMV DI RNA sequences must have the 5' portion of the 2a open reading frame to ensure efficient accumulation. The importance of these factors in the selection of DI RNAs is discussed.

  7. Processes of diversification and dispersion of rice yellow mottle virus inferred from large-scale and high-resolution phylogeographical studies.

    Science.gov (United States)

    Traore, O; Sorho, F; Pinel, A; Abubakar, Z; Banwo, O; Maley, J; Hebrard, E; Winter, S; Sere, Y; Konate, G; Fargette, D

    2005-06-01

    Phylogeography of Rice yellow mottle virus (RYMV) was reconstructed from the coat protein gene sequences of a selection of 173 isolates from the 14 countries of mainland Africa where the disease occurred and from the full sequences of 16 representative isolates. Genetic variation was linked to geographical distribution and not to host species as isolates from wild rice always clustered with isolates from cultivated rice of the same region. Genetic variation was not associated to agro-ecology, viral interference and insect vector species. Distinct RYMV lineages occurred in East, Central and West Africa, although the Central African lineage included isolates from Benin, Togo and Niger at the west, adjacent to countries of the West African lineage. Genetic subdivision at finer geographical scales was apparent within lineages of Central and West Africa, although less pronounced than in East Africa. Physical obstacles, but also habitat fragmentation, as exemplified by the small low-lying island of Pemba offshore Tanzania mainland, explained strain localization. Three new highly divergent strains were found in eastern Tanzania. By contrast, intensive surveys in Cote d'Ivoire and Guinea at the west of Africa did not reveal any new variant. Altogether, this supported the view that the Eastern Arc Mountains biodiversity hotspot was the centre of origin of RYMV and that the virus spread subsequently from east to west across Africa. In West Africa, specific strains occurred in the Inner Niger Delta and suggested it was a secondary centre of diversification. Processes for diversification and dispersion of RYMV are proposed.

  8. Two basic (hydrophilic) regions in the movement protein of Parietaria mottle virus have RNA binding activity and are required for cell-to-cell transport.

    Science.gov (United States)

    Martínez, Carolina; Coll-Bonfill, Nuria; Aramburu, Jose; Pallás, Vicente; Aparicio, Frederic; Galipienso, Luis

    2014-05-12

    The movement protein (MP) of parietaria mottle virus (PMoV) is required for virus cell-to-cell movement. Bioinformatics analysis identified two hydrophilic non-contiguous regions (R1 and R2) rich in the basic amino acids lysine and arginine and with the predicted secondary structure of an α-helix. Different approaches were used to determine the implication of the R1 and R2 regions in RNA binding, plasmodesmata (PD) targeting and cell-to-cell movement. EMSA (Electrophoretic Mobility Shift Assay) showed that both regions have RNA-binding activity whereas that mutational analysis reported that either deletion of any of these regions, or loss of the basic amino acids, interfered with the viral intercellular movement. Subcellular localization studies showed that PMoV MP locates at PD. Mutants designed to impeded cell-to-cell movement failed to accumulate at PD indicating that basic residues in both R1 and R2 are critical for binding the MP at PD.

  9. Identification of the subgenomic promoter of the coat protein gene of cucumber fruit mottle mosaic virus and development of a heterologous expression vector.

    Science.gov (United States)

    Rhee, Sun-Ju; Jang, Yoon Jeong; Lee, Gung Pyo

    2016-06-01

    Heterologous gene expression using plant virus vectors enables research on host-virus interactions and the production of useful proteins, but the host range of plant viruses limits the practical applications of such vectors. Here, we aimed to develop a viral vector based on cucumber fruit mottle mosaic virus (CFMMV), a member of the genus Tobamovirus, whose members infect cucurbits. The subgenomic promoter (SGP) in the coat protein (CP) gene, which was used to drive heterologous expression, was mapped by analyzing deletion mutants from a CaMV 35S promoter-driven infectious CFMMV clone. The region from nucleotides (nt) -55 to +160 relative to the start codon of the open reading frame (ORF) of CP was found to be a fully active promoter, and the region from nt -55 to +100 was identified as the active core promoter. Based on these SGPs, we constructed a cloning site in the CFMMV vector and successfully expressed enhanced green fluorescent protein (EGFP) in Nicotiana benthamiana and watermelon (Citrullus lanatus). Co-inoculation with the P19 suppressor increased EGFP expression and viral replication by blocking degradation of the viral genome. Our CFMMV vector will be useful as an expression vector in cucurbits.

  10. Virus-Specific Read-Through Codon Preference Affects Infectivity of Chimeric Cucumber Green Mottle Mosaic Viruses Displaying a Dengue Virus Epitope

    Directory of Open Access Journals (Sweden)

    2009-03-01

    Full Text Available A Cucumber green mottle mosaic virus (CGMMV was used to present a truncated dengue virus type 2 envelope (E protein binding region from amino acids 379 to 423 (EB4. The EB4 gene was inserted at the terminal end of the CGMMV coat protein (CP open reading frame (ORF. Read-through sequences of TMV or CGMMV, CAA-UAG-CAA-UUA, or AAA-UAG-CAA-UUA were, respectively, inserted in between the CP and the EB4 genes. The chimeric clones, pRT, pRG, and pCG+FSRTRE, were transcribed into full-length capped recombinant CGMMV transcripts. Only constructs with the wild-type CGMMV read-through sequence yielded infectious viruses following infection of host plant, muskmelon (Cucumis melo leaves. The ratio of modified to unmodified CP for the read-through expression clone developed was also found to be approximately 1:1, higher than what has been previously reported. It was also observed that infectivity was not affected by differences in pI between the chimera and its wild counterpart. Analysis of recombinant viruses after 21-days-postinculation (dpi revealed that deletions occurred resulting in partial reversions of the viral population to near wild type and suggesting that this would be the limiting harvest period for obtaining true to type recombinants with this construct.

  11. High-Throughput Sequencing Identifies Novel and Conserved Cucumber (Cucumis sativus L.) microRNAs in Response to Cucumber Green Mottle Mosaic Virus Infection.

    Science.gov (United States)

    Liu, H W; Luo, L X; Liang, C Q; Jiang, N; Liu, P F; Li, J Q

    2015-01-01

    Seedlings of Cucumis sativus L. (cv. 'Zhongnong 16') were artificially inoculated with Cucumber green mottle mosaic virus (CGMMV) at the three-true-leaf stage. Leaf and flower samples were collected at different time points post-inoculation (10, 30 and 50 d), and processed by high throughput sequencing analysis to identify candidate miRNA sequences. Bioinformatic analysis using screening criteria, and secondary structure prediction, indicated that 8 novel and 23 known miRNAs (including 15 miRNAs described for the first time in vivo) were produced by cucumber plants in response to CGMMV infection. Moreover, gene expression profiles (p-value cucumbers. Gene ontology (GO) analysis revealed that the predicted target genes of these 88 miRNAs, which were screened using the psRNATarget and miRanda algorithms, were involved in three functional categories: 2265 in molecular function, 1362 as cellular components and 276 in biological process. The subsequent Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis revealed that the predicted target genes were frequently involved in metabolic processes (166 pathways) and genetic information processes (40 pathways) and to a lesser degree the biosynthesis of secondary metabolites (12 pathways). These results could provide useful clues to help elucidate host-pathogen interactions in CGMMV and cucumber, as well as for the screening of resistance genes.

  12. Virus-specific read-through codon preference affects infectivity of chimeric cucumber green mottle mosaic viruses displaying a dengue virus epitope.

    Science.gov (United States)

    Teoh, Pak-Guan; Ooi, Aik-Seng; AbuBakar, Sazaly; Othman, Rofina Yasmin

    2009-01-01

    A Cucumber green mottle mosaic virus (CGMMV) was used to present a truncated dengue virus type 2 envelope (E) protein binding region from amino acids 379 to 423 (EB4). The EB4 gene was inserted at the terminal end of the CGMMV coat protein (CP) open reading frame (ORF). Read-through sequences of TMV or CGMMV, CAA-UAG-CAA-UUA, or AAA-UAG-CAA-UUA were, respectively, inserted in between the CP and the EB4 genes. The chimeric clones, pRT, pRG, and pCG+FSRTRE, were transcribed into full-length capped recombinant CGMMV transcripts. Only constructs with the wild-type CGMMV read-through sequence yielded infectious viruses following infection of host plant, muskmelon (Cucumis melo) leaves. The ratio of modified to unmodified CP for the read-through expression clone developed was also found to be approximately 1:1, higher than what has been previously reported. It was also observed that infectivity was not affected by differences in pI between the chimera and its wild counterpart. Analysis of recombinant viruses after 21-days-postinculation (dpi) revealed that deletions occurred resulting in partial reversions of the viral population to near wild type and suggesting that this would be the limiting harvest period for obtaining true to type recombinants with this construct.

  13. Study on Jerusalem artichoke Pickle Fermented Directly by LactobaciUus plantarum Producing Higher Extracellular Polysaccharide%高产胞外多糖的植物乳杆菌直投发酵菊芋泡菜的研究

    Institute of Scientific and Technical Information of China (English)

    崔树茂; 郭钦; 刘崇万; 董英

    2011-01-01

    采用自主研发的高产胞外多糖的植物乳杆菌直投式泡菜发酵剂制备菊芋泡菜,研究其发酵过程中泡菜液pH、总酸、活菌数、维生素c、氨基酸态氮和可溶性固形物含量的变化,同时探讨菊芋主要成分菊粉对植物乳杆菌生长的影响,并测定该菌胞外多糖的产量。结果表明,菊粉可促进植物乳杆菌的生长,37℃培养24h,该菌胞外多糖产量高达471mg/L。与自然发酵相比,直投发酵的菊芋泡菜各项指标均优于自然发酵,其泡菜液pH达到3.46、总酸含量达到0.36%,活菌数保持在4.3×10^8CFU/mL、维生素C含量为16.92%、氨基酸态氮含量为0.033%、可溶性固形物含量达到15%。得到的菊芋泡菜酸度适宜,呈诱人乳白色,活菌含量高,且富含植物乳杆菌胞外多糖,为老少皆宜的益生泡菜产品。%Jerusalem artichoke polysaccharidc and extraccllular polysaccharide of lactic acid bacteria have different functional properties which are probiotic. In this paper, a Lactobacillus plantarum with high EPS-produclng capacity was selected for direct vat set (DVS) culture starter and prepared for Jerusalem artichoke pickles. The changes of the pH, total acid, viable count, vitamin C, amino acid nitrogen and soluble solids content in the pickle liquid were studied, while the effect of inulin which is the main component of artichoke on growth of Lactobacillus plantarum was studied. The yield of extracellular polysaccharide produced by the strain was determined. The results showed that inulin could promote the growth of Lactobacillus plantarum, and the yield of extracellular polysaccharide was up to 471 mg/L after 24h under the temperature of 37℃. Various indexes of Jerusalem artichoke pickle direct investment indicators were better than natural fermentation. The pH was up to 3.46, total acid content was 0.36% , the number of viable cells remained at 4.3×10^8 CFU/mL, content of

  14. Characterization of burdock mottle virus, a novel member of the genus Benyvirus, and the identification of benyvirus-related sequences in the plant and insect genomes.

    Science.gov (United States)

    Kondo, Hideki; Hirano, Shuichi; Chiba, Sotaro; Andika, Ida Bagus; Hirai, Makoto; Maeda, Takanori; Tamada, Tetsuo

    2013-10-01

    The complete nucleotide sequence of the burdock mottle virus (BdMoV) isolated from an edible burdock plant (Arctium lappa) in Japan has been determined. BdMoV has a bipartite genome, whose organization is similar to RNA1 and RNA2 of benyviruses, beet necrotic yellow vein virus (BNYVV), beet soil-borne mosaic virus (BSBMV), and rice stripe necrosis virus (RSNV). BdMoV RNA1 (7038 nt) contains a single open reading frame (ORF) encoding a 249-kDa polypeptide that consists of methyl-transferase, helicase, papain-like protease, AlkB-like, and RNA-dependent RNA polymerase domains. The AlkB-like domain sequence is not present in the proteins encoded by other known benyviruses, but is found in replication-associated proteins of viruses mainly belonging to the families Alfaflexiviridae and Betaflexiviridae. BdMoV RNA2 (4315 nt) contains six ORFs that are similar to those of benyviruses: these are coat protein (CP), CP readthrough, triple gene block movement and cysteine-rich proteins. Phylogenetic analyses showed that BdMoV is more closely related to BNYVV and BSBMV than to RSNV. Database searches showed that benyvirus replicase-related sequences are present in the chromosomes of a chickpea plant (Cicer arietinum) and a blood-sucking insect (Rhodnius prolixus). Some other benyvirus-related sequences are found in the transcriptome shotgun libraries of a few species of plants and a bark beetle. Our results show that BdMoV is a distinct species of the genus Benyvirus and that ancestral and extant benyviruses may have infected or currently infect a wide range of hosts, including plants and insects.

  15. Development of Bean pod mottle virus-based vectors for stable protein expression and sequence-specific virus-induced gene silencing in soybean.

    Science.gov (United States)

    Zhang, Chunquan; Ghabrial, Said A

    2006-01-20

    Plant virus-based vectors provide valuable tools for expression of foreign proteins in plants and for gene function studies. None of the presently available virus vectors is suitable for use in soybean. In the present study, we produced Bean pod mottle virus (BPMV)-based vectors that are appropriate for gene expression and virus-induced gene silencing (VIGS) in soybean. The genes of interest were inserted into the RNA2-encoded polyprotein open reading frame between the movement protein (MP) and the large coat protein (L-CP) coding regions. Additional proteinase cleavage sites were created to flank the foreign protein by duplicating the MP/L-CP cleavage site. To minimize the chances of homologous recombination and thus insert instability, we took advantage of the genetic code degeneracy and altered the nucleotide sequence of the duplicated regions without affecting amino acid sequences. The recombinant BPMV constructs were stable following several serial passages in soybean and relatively high levels of protein expression were attained. Successful expression of several proteins with different biological activities was demonstrated from the BPMV vector. These included the reporter proteins GFP and DsRed, phosphinothricin acetyltransferase (encoded by the herbicide resistance bar gene), and the RNA silencing suppressors encoded by Tomato bushy stunt virus, Turnip crinkle virus, Tobacco etch virus, and Soybean mosaic virus. The possible use of BPMV as a VIGS vector to study gene function in soybean was also demonstrated with the phytoene desaturase gene. Our results suggest that the BPMV-based vectors are suitable for expression of foreign proteins in soybean and for functional genomics applications.

  16. One-step detection of Bean pod mottle virus in soybean seeds by the reverse-transcription loop-mediated isothermal amplification

    Directory of Open Access Journals (Sweden)

    Wei Qi-Wei

    2012-09-01

    Full Text Available Abstract Background Bean pod mottle virus (BPMV is a wide-spread and destructive virus that causes huge economic losses in many countries every year. A sensitive, reliable and specific method for rapid surveillance is urgently needed to prevent further spread of BPMV. Methods A degenerate reverse-transcription loop-mediated isothermal amplification (RT-LAMP primer set was designed on the conserved region of BPMV CP gene. The reaction conditions of RT-LAMP were optimized and the feasibility, specificity and sensitivity of this method to detect BPMV were evaluated using the crude RNA rapidly extracted from soybean seeds. Results The optimized RT-LAMP parameters including 6 mM MgCl2, 0.8 M betaine and temperature at 62.5-65°C could successfully amplify the ladder-like bands from BPMV infected soybean seeds. The amplification was very specific to BPMV that no cross-reaction was observed with other soybean viruses. Inclusion of a fluorescent dye makes it easily be detected in-tube by naked eye. The sensitivity of RT-LAMP assay is higher than the conventional RT-PCR under the conditions tested, and the conventional RT-PCR couldn’t be used for detection of BPMV using crude RNA extract from soybean seeds. Conclusion A highly efficient and practical method was developed for the detection of BPMV in soybean seeds by the combination of rapid RNA extraction and RT-LAMP. This RT-LAMP method has great potential for rapid BPMV surveillance and will assist in preventing further spread of this devastating virus.

  17. Evaluation of a SUMO E2 conjugating enzyme involved in resistance to Clavibacter michiganensis subsp. michiganensis in Solanum peruvianum, through a tomato mottle virus VIGS assay

    Directory of Open Access Journals (Sweden)

    Mayra Janeth Esparza-Araiza

    2015-12-01

    Full Text Available Clavibacter michiganensis subsp. michiganensis (Cmm causes bacterial wilt and canker of tomato. Currently, no Solanum lycopersicum resistant varieties are commercially available, but some degree of Cmm resistance has been identified in Solanum peruvianum. Previous research showed up-regulation of a SUMO E2 conjugating enzyme (SCEI transcript in resistant S. peruvianum compared to susceptible S. lycopersicum following infection by Cmm. In order to test the role of SCEI in resistance to Cmm, a fragment of the gene from S. peruvianum was cloned into a novel virus-induced gene-silencing (VIGS vector based on the geminivirus Tomato Mottle Virus (ToMoV. Using biolistic inoculation, the ToMoV-based VIGS vector was shown to be effective in S. peruvianum by silencing the magnesium chelatase gene, which resulted in leaf bleaching. The ToMoV_SCEI construct resulted in approx. 61% silencing of SCEI in leaves of S. peruvianum as determined by quantitative RT-PCR. VIGS of SCEI in S. peruvianum resulted in unilateral wilting (15 dpi and subsequent death (20 dpi of the entire plant after Cmm inoculation, whereas empty vector-treated plants only showed wilting in the Cmm-inoculated leaf. SCEI-silenced plants also showed higher Cmm colonization with an average of 4.5 times more damaged tissue compared to the empty vector control plants. SCEI appears to play an important role in the innate immunity of S. peruvianum against Cmm, perhaps through the regulation of WRKY transcription factors, which may lead to expression of proteins involved in salicylic acid-dependent defense responses.

  18. 香石竹斑驳病毒的鉴定和RT-PCR检测%Identification and detection of carnation mottle virus on carnation by RT-PCR

    Institute of Scientific and Technical Information of China (English)

    孔宝华; 蔡红; 刘进元; 陈海如; 常胜军; 李文君; 段永嘉

    2002-01-01

    从表现为叶斑驳、花碎色症状的香石竹病株上获得一病毒分离物,电镜负染观察到直径为28~33 nm的球状粒子.病毒提取液经紫外光测定呈典型核蛋白吸收曲线,OD260/ OD280=1.70;血清学反应与CarMV抗血清出现明显的沉淀线.通过以上实验结果,确定该病毒分离物为香石竹斑驳病毒(carnation mottle virus, CarMV).根据该病毒的RNA序列设计引物,对病健材料进行了RT-PCR检测,结果从感病材料中扩增出大约600 bp的特异片段,而健康植物无此扩增带.将PCR产物连接pGEM-T-easy载体,转化大肠杆菌JM109,得到了含目的片段的重组子,经双脱氧序列分析,与Guilley报道的序列对应部分的核苷酸序列基本一致(其同源性达96%),最低检出病毒核酸含量为5 ng,表明应用RT-PCR检测香石竹斑驳病毒是可行的.

  19. Different Virus-Derived siRNAs Profiles between Leaves and Fruits in Cucumber Green Mottle Mosaic Virus-Infected Lagenaria siceraria Plants.

    Science.gov (United States)

    Li, Junmin; Zheng, Hongying; Zhang, Chenhua; Han, Kelei; Wang, Shu; Peng, Jiejun; Lu, Yuwen; Zhao, Jinping; Xu, Pei; Wu, Xiaohua; Li, Guojing; Chen, Jianping; Yan, Fei

    2016-01-01

    RNA silencing is an evolutionarily conserved antiviral mechanism, through which virus-derived small interfering RNAs (vsiRNAs) playing roles in host antiviral defense are produced in virus-infected plant. Deep sequencing technology has revolutionized the study on the interaction between virus and plant host through the analysis of vsiRNAs profile. However, comparison of vsiRNA profiles in different tissues from a same host plant has been rarely reported. In this study, the profiles of vsiRNAs from leaves and fruits of Lagenaria siceraria plants infected with Cucumber green mottle mosaic virus (CGMMV) were comprehensively characterized and compared. Many more vsiRNAs were present in infected leaves than in fruits. vsiRNAs from both leaves and fruits were mostly 21- and 22-nt in size as previously described in other virus-infected plants. Interestingly, vsiRNAs were predominantly produced from the viral positive strand RNAs in infected leaves, whereas in infected fruits they were derived equally from the positive and negative strands. Many leaf-specific positive vsiRNAs with lengths of 21-nt (2058) or 22-nt (3996) were identified but only six (21-nt) and one (22-nt) positive vsiRNAs were found to be specific to fruits. vsiRNAs hotspots were only present in the 5'-terminal and 3'-terminal of viral positive strand in fruits, while multiple hotspots were identified in leaves. Differences in GC content and 5'-terminal nucleotide of vsiRNAs were also observed in the two organs. To our knowledge, this provides the first high-resolution comparison of vsiRNA profiles between different tissues of the same host plant.

  20. Evaluation of Plant Growth Promoting Rhizobacteria as a Protecting Agent Against Cucumber Mosaic Virus and Chilli Veinal Mottle Virus on Chillipepper

    Directory of Open Access Journals (Sweden)

    MUHAMMAD TAUFIK

    2005-12-01

    Full Text Available This study was conducted to evaluate the effectiveness of plant growth promoting rhizobacteria (PGPR in protecting chillipepper plant from infection of cucumber mosaic virus (CMV and chilli veinal mottle virus (ChiVMV. Seven isolates of PGPR, i.e. BC1, BTP2H, BTP3G, BTP3O BTP1, BTP2D, and T1F were applied as seed treatment and soil drench. Plants height, number of branch, and fruits weight were measured every one and ten weeks after virus inoculation. Virus concentration in plants and disease incidence were confirmed by enzyme-linked immunosorbant assay (ELISA. Results showed that inoculation with PGPR improved the seed germination. Eight days after sowing, the percentage of PGPR treated seed germination reached 50-84%; whereas those of untreated seed reached only 18%. In general, PGPR treatment significantly reduced (p < 0.05 the effect of virus infection on plant growth. Two PGPR isolates, i.e. BTP1 and BTP2H, maintained fruit weight of infected plants as good as those of healthy plants. Based on ELISA, PGPR was able to inhibit the disease incidence. The BTP3O and BTP2D isolates even protected the plant from ChiVMV infection. Concentration of salicylic acid and peroxidase were relatively higher on plants treated with PGPR than those without PGPR treatment. This gave an indication that PGPR may act as induction agents for systemic acquired resistance. Therefore, PGPR treatment is a promising strategy to control viral diseases on chillipepper.

  1. High-Throughput Sequencing Identifies Novel and Conserved Cucumber (Cucumis sativus L. microRNAs in Response to Cucumber Green Mottle Mosaic Virus Infection.

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    H W Liu

    Full Text Available Seedlings of Cucumis sativus L. (cv. 'Zhongnong 16' were artificially inoculated with Cucumber green mottle mosaic virus (CGMMV at the three-true-leaf stage. Leaf and flower samples were collected at different time points post-inoculation (10, 30 and 50 d, and processed by high throughput sequencing analysis to identify candidate miRNA sequences. Bioinformatic analysis using screening criteria, and secondary structure prediction, indicated that 8 novel and 23 known miRNAs (including 15 miRNAs described for the first time in vivo were produced by cucumber plants in response to CGMMV infection. Moreover, gene expression profiles (p-value <0.01 validated the expression of 3 of the novel miRNAs and 3 of the putative candidate miRNAs and identified a further 82 conserved miRNAs in CGMMV-infected cucumbers. Gene ontology (GO analysis revealed that the predicted target genes of these 88 miRNAs, which were screened using the psRNATarget and miRanda algorithms, were involved in three functional categories: 2265 in molecular function, 1362 as cellular components and 276 in biological process. The subsequent Kyoto Encyclopedia of Genes and Genomes (KEGG pathway analysis revealed that the predicted target genes were frequently involved in metabolic processes (166 pathways and genetic information processes (40 pathways and to a lesser degree the biosynthesis of secondary metabolites (12 pathways. These results could provide useful clues to help elucidate host-pathogen interactions in CGMMV and cucumber, as well as for the screening of resistance genes.

  2. Different virus-derived siRNAs profiles between leaves and fruits in Cucumber green mottle mosaic virus-infected Lagenaria siceraria

    Directory of Open Access Journals (Sweden)

    Junmin Li

    2016-11-01

    Full Text Available RNA silencing is an evolutionarily conserved antiviral mechanism, through which virus-derived small interfering RNAs (vsiRNAs playing roles in host antiviral defence are produced in virus-infected plant. Deep sequencing technology has revolutionized the study on the interaction between virus and plant host through the analysis of vsiRNAs profile. However, comparison of vsiRNA profiles in different tissues from a same host plant has been rarely reported. In this study, the profiles of virus-derived small interfering RNAs (vsiRNAs from leaves and fruits of Lagenaria siceraria plants infected with Cucumber green mottle mosaic virus (CGMMV were comprehensively characterized and compared. Many more vsiRNAs were present in infected leaves than in fruits. vsiRNAs from both leaves and fruits were mostly 21- and 22-nt in size as previously described in other virus-infected plants. Interestingly, vsiRNAs were predominantly produced from the viral positive strand RNAs in infected leaves, whereas in infected fruits they were derived equally from the positive and negative strands. Many leaf-specific positive vsiRNAs with lengths of 21-nt (2,058 or 22-nt (3,996 were identified but only six (21-nt and one (22-nt positive vsiRNAs were found to be specific to fruits. vsiRNAs hotspots were only present in the 5’-terminal and 3’-terminal of viral positive strand in fruits, while multiple hotspots were identified in leaves. Differences in GC content and 5'-terminal nucleotide of vsiRNAs were also observed in the two organs. To our knowledge, this provides the first high-resolution comparison of vsiRNA profiles between different tissues of the same host plant.

  3. Analysis and Identification of Polyphenols in Artichoke (Cynara scolymus L.) by the Method of HPLC-UV-MS%HPLC-UV-MS法对洋蓟中多酚类化合物的分析和鉴定

    Institute of Scientific and Technical Information of China (English)

    郑成凤; 潘裕添; 苑小宁; 高飞

    2013-01-01

    借助 HPLC-UV-MS 方法对云南洋蓟中多酚类化合物进行分析鉴定和含量测定.液相色谱分离采用ZORBAX Eclipse XDB-C18分析柱,以乙腈和水(含0.08%甲酸)为流动相梯度洗脱,流速为0.5 mL/min.根据多级质谱分析,并与对照品和文献数据比较,确定洋蓟样品甲醇提取液中含有19种多酚类化合物.色谱实验结果表明绿原酸、木犀草苷和水飞蓟宾在其线性范围内具有良好的线性关系(R2≥0.9998),最低检测限(LOD)分别为0.153μg/mL、0.336μg/mL 和0.313μg/mL,且在洋蓟样品中的含量分别为27.79 mg/g、10.25 mg/g和58.72 mg/g.%In this paper, we conducted an analysis identification and content determination of polyphenolic compounds in artichoke (Cynara scolymus L.) from Yunnan by the method of HPLC-UV-MS. The liquid chromatographic separation was performed by the ZORBAX Eclipse XDB-C18 analytical column, which based in the mobile phase gradient elution with acetonitrile and water (containing 0.08%formic acid) at a flow rate of 0.5 mL/min. According to the analysis of multistage mass spectrometry, and the comparison with reference compounds and literature data, we confirmed that methanol extract in artichoke samples contained 19 kinds of polyphenolic compounds. Chromatographic experimental results showed that chlorogenic acid, luteoloside and silibinin had a good linear regression (R2≥0.9998) in its linear ranges, and the limits of detection (LODs) were 0.153μg/mL、0.336μg/mL and 0.313μg/mL, respectively. And the content in artichokes sample were 27.79 mg/g, 10.25 mg/g and 58.72 mg/g, respectively.

  4. Genome sequence analysis of five Canadian isolates of strawberry mottle virus reveals extensive intra-species diversity and a longer RNA2 with increased coding capacity compared to a previously characterized European isolate.

    Science.gov (United States)

    Bhagwat, Basdeo; Dickison, Virginia; Ding, Xinlun; Walker, Melanie; Bernardy, Michael; Bouthillier, Michel; Creelman, Alexa; DeYoung, Robyn; Li, Yinzi; Nie, Xianzhou; Wang, Aiming; Xiang, Yu; Sanfaçon, Hélène

    2016-06-01

    In this study, we report the genome sequence of five isolates of strawberry mottle virus (family Secoviridae, order Picornavirales) from strawberry field samples with decline symptoms collected in Eastern Canada. The Canadian isolates differed from the previously characterized European isolate 1134 in that they had a longer RNA2, resulting in a 239-amino-acid extension of the C-terminal region of the polyprotein. Sequence analysis suggests that reassortment and recombination occurred among the isolates. Phylogenetic analysis revealed that the Canadian isolates are diverse, grouping in two separate branches along with isolates from Europe and the Americas.

  5. Ocorrência generalizada do Lettuce mottle virus em três regiões produtoras de alface comercial do Estado de São Paulo Occurrence of Lettuce mottle virus on three lettuce producing areas from São Paulo State

    Directory of Open Access Journals (Sweden)

    Renate Krause-Sakate

    2008-02-01

    Full Text Available Os sequivírus são vírus isométricos transmitidos por afídeos. Lettuce mottle virus (LeMoV, um provável sequivirus foi descrito no Brasil em 1982 e causa sintomas de mosaico semelhantes aos observados pelo Lettuce mosaic virus (LMV. Um levantamento para ocorrência do LeMoV nos campos de produção de alface de três diferentes regiões do Estado de São Paulo (Mogi das Cruzes, Campinas e Bauru foi realizado durante 2002 a 2005. RNA total foi extraído e utilizado na detecção, em RT-PCR, com oligonucleotídeos específicos para o LeMoV. Do total de 1362 amostras, 137 (10,05% foram positivas para o LeMoV. Infecção mista com o LMV foi verificada em 43 amostras (31,4%. Foi verificada a ocorrência do LeMoV nas três diferentes regiões analisadas, porém sua ocorrência foi baixa nas diferentes épocas do ano.Sequiviruses are isometric aphid-borne plant viruses. Lettuce mottle virus (LeMoV, a putative sequivirus was first described in Brazil on 1982 causing similar mosaic symptoms as Lettuce mosaic virus (LMV. A survey for the occurrence of LeMoV on open field conditions was carried out during 2002 to 2005 on Mogi das Cruzes, Campinas and Bauru in São Paulo state. Total RNA was extracted and used on RT-PCR with specific LeMoV primers. On 1362 samples tested, 137 (10,05% were positive for LeMoV. Mixed infections with LMV was observed on 43 samples (31,4%. The presence of LeMoV was observed in the three different regions, but with low incidence during the year.

  6. Influence of fermentation conditions on one-step ethanol production from Jerusalem artichoke%发酵条件对一步法发酵菊芋生产乙醇的影响

    Institute of Scientific and Technical Information of China (English)

    胡弢; 周艳华; 赵国群

    2012-01-01

    One-step ethanol production from Jerusalem artichoke can be carried out by using yeasts of Saccharomyces cerevisiae with inulinase activity. In this work, the influences of initial sugar and mineral salt concentration, temperature, seed culture medium and nitrogen source on ethanol fermentation of S. cerevisiae Y05 with higher inulinase activity were investigated by using Jerusalem artichoke juice as cultural media. The results showed that:(l) the optimal initial sugar concentration was 250g/L. Higher mineral salts in Jerusalem artichoke juice did not inhibit the ethanol fermentation; (2) the optimal temperature of ethanol fermentation with S. cerevisiae Y05 was 37℃; (3) iunlin as carbon source in seed culture medium was in favour of S. cerevisiae Y05 to produce more inulinase, which stimulate its ethanol fermentation;(4) its optimal inoculum size was 15%; (5) Jerusalem artichoke juice was a perfect cultural medium, but supplementation of nitrogen sources was necessary. Supplementation of 5.0g/L corn steep liquor largely enhanced initial sugar utilized, final ethanol concentration and ethanol yield of S. cerevisiae Y05.%使用产菊粉酶的酿酒酵母可实现一步法发酵菊芋生产乙醇.该试验以菊芋汁为发酵培养基,研究了起始糖浓度、无机盐、温度、种子培养基、接种量和氮源对高菊粉酶活酿酒酵母Y05-步发酵菊粉生成乙醇的影响.试验结果表明:(1)菊芋汁中最适起始总糖浓度为250g/L.菊芋汁含有的较多无机盐对乙醇发酵不但没有抑制作用,反而有促进作用;(2)最适乙醇发酵温度为37℃;(3)种子培养基中使用菊粉做为碳源有利于酿酒酵母Y05产生较多菊粉酶,进而促进其乙醇发酵;(4)最适乙醇发酵接种量为15%;(5)尽管菊芋汁是一个良好乙醇发酵培养基,但补加氮源仍是必要的.补加5.0g/L玉米浆可显著酿酒酵母Y05的提高总糖利用率、最终乙醇浓度和乙醇得率.

  7. Transgenic cucumbers harboring the 54-kDa putative gene of Cucumber fruit mottle mosaic tobamovirus are highly resistant to viral infection and protect non-transgenic scions from soil infection.

    Science.gov (United States)

    Gal-On, Amit; Wolf, Dalia; Antignus, Yehezkel; Patlis, Larisa; Ryu, Ki Hyun; Min, Byoung Eun; Pearlsman, Malenia; Lachman, Oded; Gaba, Victor; Wang, Yongzeng; Shiboleth, Yoel Moshe; Yang, Jee; Zelcer, Aaron

    2005-02-01

    Cucumber fruit mottle mosaic tobamovirus (CFMMV) causes severe mosaic symptoms and yellow mottling on leaves and fruits and, occasionally, severe wilting of cucumber (Cucumis sativus L.) plants. No genetic source of resistance against this virus has been identified in cucumber. The gene coding for the putative 54-kDa replicase gene of CFMMV was cloned into an Agrobacterium tumefaciens binary vector, and transformation was performed on cotyledon explants of a parthenocarpic cucumber cultivar. R1 seedlings were screened for resistance to CFMMV by symptom expression, back inoculation on an alternative host and ELISA. From a total of 14 replicase-containing R1 lines, eight resistant lines were identified. Line 144--homozygous for the putative 54-kDa replicase gene--was immune to CFMMV infection by mechanical and graft inoculation, and to root infection following planting in CFMMV-infested soil. A substantial delay of symptom appearance was observed following infection by three additional cucurbit-infecting tobamoviruses. When used as a rootstock, line I44 protected susceptible cucumber scions from soil infection by CFMMV. This paper is the first report on protection of a susceptible cultivar against a soil-borne viral pathogen, by grafting onto a transgenic rootstock.

  8. 柚类果树叶片斑驳病的病原鉴定与检测%Identification and detection of pathogen causing mottle leaf of pomelo

    Institute of Scientific and Technical Information of China (English)

    田亚南; 柯穗; 李韬; 徐平东; 柯冲

    1999-01-01

    Pomelo is a group of popular cultivars of citrus in China. In recent years, diseased plants of pomelo have been found in Fujian production areas. The symptoms of the diseased trees include leaf mottle, small fruit and stunting. The disease is graft-transmissible from diseased plant to healthy pomelo and ponkan via tissue grafting. The morphological characteristics of the pathogen resemble those of Liberobacter asiaticum which causes citrus Huanglongbing (formerly "citrus greening") based on electron microscopy. The PCR products of pathogen DNA obtained with gene-specific primers for Huanglongbing liberobacter and Southern hybridization of the PCR products with oligonucleotide probe specific for the liberobacter pathogen show that there is a remarkable degree of DNA homogeneity between the pathogen from diseased pomelo and that of citrus Huanglongbing plants. Taken together, the results of this study show that the causative agent of pomelo disease is either identical or very closely related to the Liberobacter asiaticum which causes citrus Huanglongbing.%柚类是柑桔中的一类重要品种,在我国有广泛的分布.近年来,在福建等产区发现柚类病树日趋增多,其病状为叶片斑驳、小果、植株矮化,暂称为叶片斑驳病.本病能通过组织嫁接从病柚树传染到柚健苗和芦柑健苗.在电镜下观察,其病原菌体的形态和细胞壁构造与柑桔黄龙病的病原(Liberobacter asiaticum)十分相似.应用柑桔黄龙病病原DNA的特异性引物进行PCR试验产生的PCR 产物,其分子量与柑桔黄龙病病原DNA PCR 产物的基本相同,为563 bp.;以及应用柑桔黄龙病病原的特异性探针与其PCR 产物进行Southern 杂交试验,能产生杂交反应;这些都表明在柚树病原DNA与柑桔黄龙病病原DNA之间存在着十分高度的同源性.综上结果证明:柚类叶片斑驳的病原很可能与柑桔黄龙病病原是相同的,或其关系是十分密切的.

  9. Proteomic analysis of pathogenesis-related proteins (PRs) induced by compatible and incompatible interactions of pepper mild mottle virus (PMMoV) in Capsicum chinense L3 plants.

    Science.gov (United States)

    Elvira, Maria Isabel; Galdeano, Myriam Molina; Gilardi, Patricia; García-Luque, Isabel; Serra, Maria Teresa

    2008-01-01

    Resistance conferred by the L(3) gene is active against most of the tobamoviruses, including the Spanish strain (PMMoV-S), a P(1,2) pathotype, but not against certain strains of pepper mild mottle virus (PMMoV), termed P(1,2,3) pathotype, such as the Italian strain (PMMoV-I). Both viruses are nearly identical at their nucleotide sequence level (98%) and were used to challenge Capsicum chinense PI159236 plants harbouring the L(3) gene in order to carry out a comparative proteomic analysis of PR proteins induced in this host in response to infection by either PMMoV-S or PMMoV-I. PMMoV-S induces a hypersensitive reaction (HR) in C. chinense PI159236 plant leaves with the formation of necrotic local lesions and restriction of the virus at the primary infection sites. In this paper, C. chinense PR protein isoforms belonging to the PR-1, beta-1,3-glucanases (PR-2), chitinases (PR-3), osmotin-like protein (PR-5), peroxidases (PR-9), germin-like protein (PR-16), and PRp27 (PR-17) have been identified. Three of these PR protein isoforms were specifically induced during PMMoV-S-activation of C. chinense L(3) gene-mediated resistance: an acidic beta-1,3-glucanase isoform (PR-2) (M(r) 44.6; pI 5.1), an osmotin-like protein (PR-5) (M(r) 26.8; pI 7.5), and a basic PR-1 protein isoform (M(r) 18; pI 9.4-10.0). In addition, evidence is presented for a differential accumulation of C. chinense PR proteins and mRNAs in the compatible (PMMoV-I)-C. chinense and incompatible (PMMoV-S)-C. chinense interactions for proteins belonging to all PR proteins detected. Except for an acidic chitinase (PR-3) (M(r) 30.2; pI 5.0), an earlier and higher accumulation of PR proteins and mRNAs was detected in plants associated with HR induction. Furthermore, the accumulation rates of PR proteins and mRNA did not correlate with maximal accumulation levels of viral RNA, thus indicating that PR protein expression may reflect the physiological status of the plant.

  10. Kajian Morfologi Anatomi dan Agronomi antara Kedelai Sehat dengan Kedelai Terserang Cowpea Mild Mottle Virus serta Pemanfaatannya sebagai Bahan Ajar Sekolah Menengah Kejuruan

    Directory of Open Access Journals (Sweden)

    As’ad Syamsul Arifin

    2014-06-01

    Full Text Available Salah satu penyebab rendahnya produktivitas kedelai di Indonesia adalah serangan virus belang samar kacang tunggak Cowpea mild mottle virus (CPMMV. Penelitian ini adalah penelitian survei yang bertujuan untuk menggambarkan dan mengumpulkan informasi tentang kajian morfologi, anatomi dan agronomi terhadap infeksi CPMMV antara varietas yang terinfeksi dengan yang tidak terinfeksi. Data dianalisi secara deskriptif dan secara Inferensial ANAVA dengan menggunakan pro-gram SPSS for Windows versi 16. Hasil penelitian menunjukkan: Varietas Gumitir sehat, Anjosmoro sehat, Mahameru sehat , MLGG 0021, dan MLGG 0268 memiliki ukuran lebih besar dalam hal panjang daun, lebar daun, panjang petiol daun, nisbah daun (L/W, dan nisbah daun (L/PL dibandingkan va-rietas yang sakit. Varietas Argopuro sakit memiliki ukuran lebih besar dalam hal panjang daun, lebar daun, panjang petiol daun, dan nisbah daun (L/W, Nisbah daun (L/PL dibandingkan varietas yang sehat. Tidak terdapat perbedaan warna hipokotil, perbedaan bentuk daun, warna daun, warna bulu batang, permukaan daun antara kedelai sehat dan sakit pada keenam varietas. Terdapat perbedaan warna biji, warna polong masak, antara kedelai sehat dan sakit pada keenam varietas. Warna bunga pada kelima varietas kedelai sehat dan sakit berwarna ungu, kecuali pada varietas Gumitir berwarna putih. Terdapat perbedaan bentuk daun pada varietas Argopuro, Anjosmoro, Mahameru sehat dan sakit. Tidak terdapat perbedaan bentuk daun antara sehat dan sakit pada varietas Gumitir, MLGG 0021 dan MLGG 0268. Ada pengaruh varietas, kondisi, interaksi varietas dan kondisi terhadap ukuran sel daun. Ada pengaruh varietas terhadap jumlah stomata, kondisi serta interaksi varietas dan kondisi tidak berpengaruh secara nyata terhadap jumlah stomata. Tidak terdapat pengaruh varietas, interaksi varietas dan kondisi terhadap jumlah epidermis. Ada pengaruh kondisi terhadap jumlah epidermis. Jumlah trikoma varietas kedelai sehat lebih banyak daripada

  11. Transmissão do Cowpea mild mottle virus pela mosca branca Bemisia tabaci biótipo B para plantas de feijão e soja Transmission of the Cowpea mild mottle virus by whitefly Bemisia tabaci biotype B for plants of beans and soy

    Directory of Open Access Journals (Sweden)

    Julio Massaharu Marubayashi

    2010-06-01

    Full Text Available A necrose da haste da soja é causada por um vírus do gênero Carlavirus transmitido pela mosca branca Bemisia tabaci, também infectante de feijão e identificado como Cowpea mild mottle virus (CpMMV. Neste trabalho foram realizados testes para determinação do número de moscas-brancas B. tabaci biótipo B necessários para transmissão do vírus em feijoeiro e soja. Na sequência foram realizados dois outros testes, com 10 insetos por planta. Avaliaram-se períodos de acesso à aquisição (PAA de 'Jalo' para 'Jalo', e o efeito de períodos de acesso à inoculação (PAI. Foram visualmente constatados sintomas típicos do carlavírus como mosaico, clareamento de nervuras, necrose sistêmica e redução de crescimento. Houve transmissão do vírus para 'BT-2' de feijão e 'BRS-132' de soja com apenas um inseto por planta, sendo mais eficaz nesta última espécie. A taxa de transmissão do vírus foi maior com o aumento do número de insetos por planta. E o PAA foi determinado após 15' de tempo para aquisição, e o PAI com 5 min e aumentando os períodos de acesso a aquisição e inoculação aumentou-se a taxa de transmissão.The stem necrosis of soybean is caused by a virus of the Carlavirus and transmitted for the whitefly Bemisia tabaci, also infectad of beans and identified as Cowpea mild mottle virus (CpMMV. In this work biotype B for transmission of the virus in beans and soy had been carried through tests for determination of the number of necessary whiteflys B. tabaci. In the sequence two other tests had been carried through, with 10 insects for plant. Periods of access to the acquisition (PAA of 'Jalo' for 'Jalo', and the effect of periods of access to the inoculation (PAI had been evaluated increase. Visually typical symptoms of carlavirus had been evidenced as mosaic, veinclearing, sistemic necrosis and reduction of growth. It had transmission of the virus for 'BT-2' of beans and 'BRS-132' of soy with only one insect for plant

  12. Classification of cryo electron microscopy images, noisy tomographic images recorded with unknown projection directions, by simultaneously estimating reconstructions and application to an assembly mutant of Cowpea Chlorotic Mottle Virus and portals of the bacteriophage P22

    Science.gov (United States)

    Lee, Junghoon; Zheng, Yili; Yin, Zhye; Doerschuk, Peter C.; Johnson, John E.

    2010-08-01

    Cryo electron microscopy is frequently used on biological specimens that show a mixture of different types of object. Because the electron beam rapidly destroys the specimen, the beam current is minimized which leads to noisy images (SNR substantially less than 1) and only one projection image per object (with an unknown projection direction) is collected. For situations where the objects can reasonably be described as coming from a finite set of classes, an approach based on joint maximum likelihood estimation of the reconstruction of each class and then use of the reconstructions to label the class of each image is described and demonstrated on two challenging problems: an assembly mutant of Cowpea Chlorotic Mottle Virus and portals of the bacteriophage P22.

  13. 甘薯羽状斑驳病毒外壳蛋白基因的分子变异%Molecular variation of Sweet potato feathery mottle virus coat protein gene

    Institute of Scientific and Technical Information of China (English)

    王晓华; 张振臣; 乔奇; 秦艳红; 张德胜; 田雨婷

    2012-01-01

    应用单链构象多态性(single-strand conformation polymorphism,SSCP)技术结合核苷酸序列测定的方法,对我国甘薯主产区11个省份的甘薯羽状斑驳病毒(Sweet potato feathery mottle virus,SPFMV)外壳蛋白(CP)基因的分子变异情况进行了研究.结果表明,SPFMV CP基因的RT-PCR产物表现了较丰富的图谱类型,50个分离物共产生9种主要的SSCP带型;对显示不同带型的20个样品的CP基因进行了序列测定和进化树分析,CP基因核苷酸序列一致性为77.2%~99.9%.说明这些样品的SPFMV的CP基因存在较大的分子变异,可划分为EA、RC、O和C4个株系.%Virus samples were collected from 11 provinces in China, and the molecular variation of Sweet potato feathery mottle virus (SPFMV) coat protein (CP) gene were analyzed using single-strand conformation polymorphism (SSCP) and sequence analysis. SSCP analysis of 50 isolates showed that these isolates produced 9 kinds of SSCP band forms. The results of sequence comparison and phylogenetic analysis showed that the identities of the nucleotide sequences of CP genes among these isolates were 77. 2% - 99. 9%. SPFMV CP genes of different isolates in China had great molecular variability and could be divided into four diverged groups at least, including the East Africa (EA), Russet Crack (RC), Ordinary (O) and Common , strain groups.

  14. 黄瓜绿斑驳花叶病毒传播方式的研究进展%Research Progress on Transmission Modes of Cucumber green mottle mosaic virus

    Institute of Scientific and Technical Information of China (English)

    李俊香; 古勤生

    2015-01-01

    黄瓜绿斑驳花叶病毒(Cucumber green mottle mosaic virus,CGMMV)是葫芦科作物重要病毒,通过多种方式如种子、土壤、水、介体和机械接触传播,病害蔓延扩散迅速。该病害在许多国家和地区频繁报道,我国也曾大面积受到为害,尤其是西瓜嫁接地区,产业损失严重。带毒种子为初侵染源,发生过该病害的地块土壤也是重要的侵染源,发病植株可通过灌溉水以及机械接触传播病毒。为了更好地控制该病害的发生与流行,本文介绍了该病毒传播方式方面的研究进展。%Cucumber green mottle mosaic virus(CGMMV;genus Tobamovirus)is an important virus of cucurbit crops. It spread through a number of ways,such as seed,soil,water,vector and mechanical contact and spread quickly. This disease was frequently reported in many countries and regions. China was once harmed by this disease on large areas,especially regions where watermelon was grafted. This disease caused severe damage in grafting watermelon production. Seed with CGMMV was the primary source of infection. And the soil contaminated with infected plants debris was also recognized as the major primary source. The infected plants can transmit virus via irrigation water and mechanical contact. In order to better control the occurance and spread of this disease,this paper introduced the research progress in the transmission modes of CGMMV.

  15. Ocorrência do vírus do mosqueado do morangueiro no estado de São Paulo Occurrence of the strawberry mottle virus in São Paulo

    Directory of Open Access Journals (Sweden)

    Ana Maria B. Carvalho

    1961-01-01

    Full Text Available Verificou-se a ocorrência de estirpes do vírus do grupo denominado mosqueado («strawberry mottle» em plantações de morangueiro no Estado de São Paulo. Variedades antigas, como a Dr. Morère. acham-se totalmente infetatas. sendo portadoras sem sintomas. Alguns clones novos plantados apenas por poucos anos em campo, já se acham parcialmente infetados, indicando que há transmissão da moléstia sob condições naturais. Sintomas de palidez das nervuras, mosqueado, paralisação no crescimento e encrespamento são apresentados por plantas de Fragaria vesca infetadas pelos vírus dêsse grupo. Numerosas espécies de plantas-teste habituais foram inoculadas com diferentes isolados do vírus, por meio do vetor, mas os resultados foram geralmente negativos. Afídios virulíferos, colonizados sôbre plantas novas de Cassia accidentalis, Chenopodiam quinoa, Leonotis nepaetifolia e Leonurus sibiricus. induziram o aparecimento de sintomas. Não se conseguiu retransmitir o vírus dessas espécies para F. vesca, existindo, portanto, dúvidas sôbre a verdadeira identidade do vírus que infetava tais plantas. O vírus do mosqueado não foi aparentemente transmitido pela semente. Também não se mostrou transmissível mecânicamente para Frogaria vesca. O virus obtido por inoculação com o vetor em Chenopodium quinoa e que se supõe ser o do mosqueado, pôde se transmitido mecânicamente de C. quinoa para C. quinoa. mas não para F. vesca. O pulgão Pentatrichopus fragaefolii mostrou-se eficiente vetor do mosqueado, conseguindo-se obter em média mais de 50% de infecção em infestações com 1 afidio por planta. Aphis gossypii também transmitiu o vírus do mosqueado, mas com muito menor eficiência. Não se conseguiu transmitir o mosqueado com uma espécie de Cuscuta que ocorre comumeute em Campinas. Em testes de transmissão por enxertia de fôlhas, os resultados foram muito fracos devido ao mau pegamento. O pulgão Pentatrichopus fragaefolii

  16. 朝鲜蓟细菌性根茎腐烂病病原的分离与鉴定%Isolation and identification of bacterial pathogen causing stem and root rot on artichoke

    Institute of Scientific and Technical Information of China (English)

    王晓丽; 夏花; 张平喜; 朱宏建; 高必达

    2012-01-01

    A new disease on globe artichoke (Cynara scolymus L.) was observed in commercial fields in Changde, Hunan Province, China. Typical symptoms were wilting and necrosis from the outermost leaves, dark brown discoloration of the vascular tissue and pith of main stem. Eventually, the plants wilted and died. Manual weeding and cuttings often led to the development of typical soft rot during propagation. To investigate the causal agent of the disease, isolations were made from rotted stems of field artichoke plants on nutrient agar (NA). Bacteria consistently isolated from the diseased tissues formed grey-white, glossy, convex, translucent, and round colonies on NA. The bacterial cells were gram-negative rods with 2 to 8 peritrichous flagclla and rounded ends under the microscope. In artificial inoculation test, these isolates could also cause stem rot of Chinese cabbage, pepper, lettuce and artichoke, and slice rot of carrot, tomato and potato within 48 h at 28t!. The results demonstrated that these isolates are causative agent of soft-rot disease. PCR amplification was carried out by utilizing universal 16S rDNA primer pair 16SF/16SR and pel gene primers Y1/Y2. The 16S rDNA and pel gene sequences of isolate HNXDT002 (GenBank accessions JF721958 and JF721960, respectively) had 99% and 93% nucleotide identity with strains of Pectobacterium carotovorum subsp.carotovorum (GenBank accessions U80197 and CP001657, respectively). It came to the conclusion that the causal agent of soft-rot disease on artichoke belonged to Pectobacterium carotovorum subsp. carotovorum.%在湖南省常德市西洞庭管区种植的朝鲜蓟(Cynara scolumus L.)上发现了一种新的病害,其症状表现为地上部分从外层叶片开始逐步枯萎,随后根部和主茎杆的髓部腐烂变褐,最后整株枯萎.从田间感病朝鲜蓟茎杆的病健交界处用NA 培养基分离,获得10个菌株,分别指定为HNXDT001~010,并进行了致病性测定、形态观察和细

  17. Effect of different impellers on fuel ethanol production from uncooked Jerusalem Artichoke by consolidated bio-processing fermentation%搅拌桨对菊芋联合生物加工发酵生产燃料乙醇的影响

    Institute of Scientific and Technical Information of China (English)

    杨梅; 袁文杰

    2012-01-01

    The fuel ethanol was produced from uncooked Jerusalem artichoke powder by consolidated bio-processing(CBP) fermentation using Kluyveromyces marxianus yeast. Four kinds of impellers were investigated at the same ethanol fermentation conditions. The influence of the fermentation mash mixture and alcohol concentration and mash's viscosity changes during the fermentation were studied. The results showed that three-bladed propeller can significantly increase ethanol production and reduce the volume of fermentation liquid at static areas and removal of the baffle was more suitable for high concentrations of Jerusalem artichoke raw material fer- mentation. The optimized parameters were determined as follows:initial concentration of Jerusalem artichoke dry powder was 201 g/L,after fed-batched the final concentration reached 273 g/L,the final ethanol centration was 78.11 g/L and ethanol yield was 0.440 7 for the theoretical value of 86.25% at 48 h fermentation. This process provides favorable conditions for industrialization production of fuel ethanol from Jerusalem artichoke.%利用马克斯克鲁维酵母,通过联合生物加工(CBP)技术发酵菊芋生料生成乙醇.在相同的发酵工艺条件下,分别考察四种搅拌桨对乙醇发酵的影响,包括发酵液的混合情况及乙醇浓度、醪液的黏度等参数的变化.结果表明:三叶推进式搅拌桨能够明显提高乙醇产量,并减少发酵液静止区的体积,拆除挡板更适合高浓度菊芋生料的发酵.发酵初始干粉浓度为201g/L,补料后菊芋干粉终浓度达到273g/L时,48h乙醇浓度达到78.11g/L,乙醇对糖的得率为0.4407,为理论值的86.25%.此工艺为菊芋乙醇工业化的生产提供了有利条件.

  18. 玉米褪绿斑驳病毒实时荧光RT-PCR检测方法研究%Detection of Maize chlorotic mottle virus by real-time fluorescent RT-PCR

    Institute of Scientific and Technical Information of China (English)

    闻伟刚; 张建成; 崔俊霞; 张颖

    2011-01-01

    Maize chlorotic mottle virus ( MCMV) is a quarantine pests issued by Chinese government. In this study, accord to the conservative sequences of the coat protein genes of different MCMV isolates, a real - time fluorescent RT - PCR method was established based on specific primers and TaqMan probe. Specific studies have shown that for the two MCMV strains from different sources, a typical amplification curve can be obtained, and not for the Wheat streak mosaic virus, Maize rough dwarf virus and Maize dwarf mosaic virus. Sensitivity comparison found that the detection limit can reach 10 ~5 dilution, which is 100 times higher than the regular RT - PCR method. Thus, the real - time fluorescent RT - PCR is a rapid, sensitive and highly specific method for the detection of MCMV.%玉米褪绿斑驳病毒(Maize chlorotic mottle virus,MCMV)是我国对外公布的检疫性有害生物.本研究根据该病毒外壳蛋白基因的保守序列,设计得到特异性引物及Taqman荧光探针,建立了MCMV的实时荧光RT-PCR方法,并对其灵敏度与特异性进行了研究.该方法针对2个不同来源的毒株均能得到典型扩增曲线,而没有从小麦线条花叶病毒、玉米粗缩病毒和玉米矮花叶病毒的RNA得到扩增曲线,表明引物与荧光探针具有良好的特异性.针对玉米褪绿斑驳病毒RNA不同稀释度样品,实时荧光RT-PCR检测低限达到10-5稀释度,检测灵敏度要比普通RT-PCR高出100倍.因此,本研究建立的MCMV实时荧光方法具有特异性强、灵敏度高和快速有效的优点.

  19. Ethanol fermentation from Jerusalem artichoke tubers by a genetically-modified Saccharomyces cerevisiae strain capable of secreting inulinase%菊粉酶基因在酿酒酵母中的表达及乙醇发酵

    Institute of Scientific and Technical Information of China (English)

    李楠楠; 袁文杰; 王娜; 辛程勋; 葛旭萌; 白凤武

    2011-01-01

    Ethanol fermentation from Jerusalem artichoke tubers by recombinant Saccharomyces cerevisiae strains expressing the inulinase gene (inu) from Kluyveromyces marxianus was investigated. The inu native and pgk promoters were used to drive the expression of the inu gene, and the inulinase was expressed as an extracellular enzyme. All positive clones (confirmed by PCR) were able to express inulinase as measured by enzyme activity in the culture supernatant, among which two clones HI6/6 and HPI6/3 were selected, and their inulinase activity and ethanol fermentation performance were compared with their wild type. The inulinase activities of 86 and 23.8 U/mL were achieved, which were 4.6-fold and 1.5-fold higher than that of the wild type. Furthermore, ethanol fermentation was carried out with the recombinants and medium containing 200 g/L raw Jerusalem artichoke meal, and ethanol concentrations of 55 g/L and 52 g/L were obtained, with ethanol yields of 0.495 and 0.453, respectively, equivalent to 96.9% and 88.6% of the theoretical value.%以乙醇耐受力较强的酿酒酵母为受体菌,构建了能够分泌菊粉酶的基因工程菌并进行了菊芋粉的生料发酵.首先,以马克斯克鲁维酵母Kluyveromyces marxianus中的基因组DNA为模板,PCR扩增菊粉酶编码基因inu,分别使用菊粉酶自身启动子和酵母磷酸甘油激酶(Phosphoglycerate kinase,pgk)启动子,构建重组表达质粒HO/p-inu和HO/pgk-inu.经Not I线性化后,采用电击法转化酿酒酵母工业菌株Saccharomyces cerevisiae 6525,分别得到含菊粉酶基因的阳性菌株HI6/1~HI6/10及HPI6/1~HPI6/3.实验结果表明HI6/6及HPI6/3的菊粉酶活力较高,分别为86.0U/mL和23.8 U/mL,是出发菌株的4.6倍和1.5倍.进而以粗菊芋粉生料为底物进行了乙醇发酵,当浓度为200 g/L时,重组菌株HI6/6和HPI6/3的发酵终点乙醇浓度分别为55 g/L和52 g/L,糖醇转化率分别为0.495和0.453,达到理论值的96.9%和88.6%.这些研究工作

  20. Effect of feeding Jerusalem artichoke (Helianthus tuberosus) root as prebiotic on nutrient utilization, fecal characteristics and serum metabolite profile of captive Indian leopard (Panthera pardus fusca) fed a meat-on-bone diet.

    Science.gov (United States)

    Pradhan, S K; Das, A; Kullu, S S; Saini, M; Pattanaik, A K; Dutta, N; Sharma, A K

    2015-01-01

    An experiment was conducted to determine the effect of incorporating Jerusalem artichoke (JA) as a prebiotic in the diet of Indian leopards (n = 11 adults) fed a meat-on-bone diet. The trial consisted of three periods (A1 , B, and A2 ). Each period comprised 17 days of adaptation and four days of collection. During the control periods (A1 and A2 ), the leopards were fed their normal zoo diets of 2.5-3 kg of buffalo meat-on-bone six days a week without any supplement. During trial B, meat-on-bone diets of the leopards were supplemented with JA at 2% of dietary dry matter (DM). Meat consumption was similar among the treatments. Supplementation of JA decreased the digestibility of crude protein (P < 0.01). Digestibilities of organic matter and ether extract were similar among the treatments. Serum concentrations of urea and triglycerides were lower (P < 0.05) when JA was added to the diet. Incorporation of JA to the basal diet increased fecal concentrations of acetate (P < 0.01), butyrate (P < 0.01), lactate (P < 0.01), Lactobacillus spp., and Bifidobacterium spp. (P < 0.01) with a simultaneous decrease in the concentration of ammonia (P < 0.01), Clostridia spp. (P < 0.01), and fecal pH (P < 0.01). Fecal microbial profiles and hind gut fermentation were improved, without any adverse effects on feed consumption, nutrient utilization, and serum metabolite profiles. Results of this experiment showed that feeding JA at 2% DM in the whole diet could be potentially beneficial for captive Indian leopards fed meat-on-bone diets.

  1. Development and comparison of three PCR methods for detecting Maize chlorotic mottle virus%玉米褪绿斑驳病毒3种PCR检测方法的建立与比较

    Institute of Scientific and Technical Information of China (English)

    张露茜; 刘战民; 夏雪影; 胡培龙; 于翠; 杨翠云

    2016-01-01

    RT-PCR,TaqMan real-time RT-PCR and SYBR Green Ⅰ real-time RT-PCR approaches were developed for detection of Maize chlorotic mottle virus(MCMV),and their sensitivity in detection of MCMV was compared.Results showed that the sensitivities of TaqMan real-time RT-PCR and SYBR Green Ⅰ real-time RT-PCR methods were ten to one hundred times higher than that of conventional RT-PCR,in particular the TaqMan real-rime RT-PCR,which displays the highest sensitivity with a detectable limit of 1.61 fg.%以带有玉米褪绿斑驳病毒(MCMV)的玉米叶片为材料,研究建立了MCMV的普通RT-PCR、TaqMan实时荧光RT-PCR和SYBR GreenⅠ实时荧光RT-PCR检测方法,并比较了3种方法的灵敏度.结果表明:TaqMan实时荧光RT-PCR的检测灵敏度最高,最低检出量可达1.61 fg,SYBR Green Ⅰ实时荧光RT-PCR略逊之,普通RT-PCR的检测灵敏度则相对较低,与前两者相差10~100倍.

  2. 香石竹斑驳病毒外壳蛋白基因的原核表达及抗血清制备%Prokaryotic Expression and Antiserum Preparation of the Coat Protein Gene of Carnation mottle virus

    Institute of Scientific and Technical Information of China (English)

    李晓鹏; 王连春; 彭杰军; 姬盼; 李准; 孔宝华; 陈海如

    2013-01-01

    香石竹斑驳病毒(Carnation mottle virus,CarMV)是侵染香石竹的主要病毒.本研究从已鉴定的CarMV毒源植物中提取总RNA,克隆外壳蛋白(cp)基因后构建pET30a-CP重组质粒,并转入BL21 (DE3) pLysS进行原核表达.通过对诱导温度、初菌浓度、IPTG的浓度等表达条件进行优化,目的蛋白在37℃,IPTG终浓度为1.0 mmol/L的条件下,诱导表达6h后获得最高表达量.采用割胶的方法纯化cp蛋白,纯化后的目的蛋白免疫小鼠获得了特异性抗血清.经Western-blot检测,结果表明所制备的抗血清与诱导表达的重组蛋白及接种CarMV的香石竹样品均发生特异性结合.利用所制备抗血清对昆明地区的48个香石竹样品进行抽检,结果表明香石竹样品的带毒率为79.2%.本研究为大规模抗血清生产、检测应用和深入研究该病毒cp基因与寄主的互作奠定基础.%Carnation mottle virus (CarMV) is one of the important viruses infecting carnation. In this study, RNA was extracted from CarMV infected carnation, and coat protein (cp) gene was cloned into pET30a ( + ) and transformed into BL21 (DE3) pLysS. The optimal conditionsor the highest expres-sion of coat protein was expressing at 37℃ for 6 h and inducing with 1. 0 mmol/L IPTG. The expressed protein was purified with gradient SDS-PAGE and the antiserum against the protein was raised in Kun-ming mice. The result of Western-blot analysis confirmed that the antiserum reacted strongly and spe-cifically recombinant CarMV cp and CarMV infected samples. Forty-eight carnation samples in Kun-ming were tested with the antibody made in this experiment, of which 79. 2% of the samples were in-fected by CarMV. This study provides a good basis for massive CarMV cp antiserum preparation CarMV detection and interaction studies between CarMV and host plants.

  3. 香石竹斑驳病毒(CarMV)主要基因的分子变异分析%Molecular variation analysis of main genes of Carnation mottle virus (CarMV)

    Institute of Scientific and Technical Information of China (English)

    佟爱仔; 孔宝华; 陈海如; 王连春; 胡中会; 李晓鹏; 蔡红

    2012-01-01

    Carnation mottle virus (CarMV) is one of the important viruses infecting Carnation. In this study, three genes of p7, p9 and CP of CarMV were isolated from twelve different cultivars of Carnation by RT-PCR and their sequences of nucleotides and amino acids were analyzed. The results showed that the p7, p9 and CP genes had higher stability by sequence alignment. The identities of the nucleotide and the amino acid sequence of p7 gene were 98.10% and 97.81 % respectively. There were evident variations at the 11th and 14thof amino acid position of p7 gene. While the identities of the nucleotide and amino acid sequence of p9 gene were 98.80% and 99.13% respectively. There was clear variations at the 4 th amino acid position of p9 gene. How-ever, the identities of the nucleotide and amino acid sequence of CP gene were 97.58% and 98.43% respec-tively. There was correlative between the 164 th and 331th amino acid. Those variations of positions of CP were dispersive. The results also showed that the mutations of p7 and p9 were main located at N-terminal parts which exposed to interact with host. Those variations of positions of CarMV might relate to vial variation and interaction between the virus and host.%香石竹斑驳病毒(Carnation mottle virus,CarMV)是侵染香石竹的主要病毒之一.本试验从12个香石竹品种中获得CarMV分离物,通过RT-PCR扩增包含p7、p9、CP3个主要基因的片段,并对扩增产物进行克隆测序.通过序列比对发现CarMV的p7、p9、CP 3个基因有较高的稳定性,p7基因核苷酸序列相似性为98.10%,氨基酸序列相似性为97.81%,其中氨基酸的第11和14位存在显著差异;p9基因核苷酸序列的相似性为98.80%,氨基酸序列相似性为99.13%,氨基酸序列在第4位差异明显;CP基因核酸序列相似性为97.58%,氨基酸的相似性为98.43%,氨基酸序列的第164和331位的变异存在相关性,整个CP变异位点比较分散.证实p7和p9的变异位点

  4. Observation on compressive strength of veneers on mottled teeth after pulse Nd:YAG laser irradiation%氟斑牙经脉冲Nd:YAG激光照射后贴面抗压强度观察

    Institute of Scientific and Technical Information of China (English)

    夏永华; 张丹丹

    2008-01-01

    Objective To analyze experimentally the compressive strength of veneers on mottled teeth after Dul8e Nd:YAG laser irradiation.Methods Sixty motded teeth were extracted,including thirty maxdlary central incisors and thirty maxillary lateral incisors and each were divided equally into two groups randomly(experimental groups and control groups).The former were irradiated by pulse Nd:YAG lafer and then etched by 37%phosphorus acid.The latter only etched by 37%phosphorus acid.All the teeth were restored by composite resin veneers and tested with Instron 4505 electronic testing machine.The average collapse loads of the veneers of incisors were tested. The maximal compressive loads of the samples were obtained,then the experimental results were analyzed.Results The average collapse loads of central incisors of test groups and control groups were(0.342±0.053),(0.289±0.041) kN respectively,with a signiticant difference(t=3.16,P<0.05).The average collapse loads of lateral incisors of test groups and control groups were(0.321±0.041),(0.208 ±0.032)kN respectively.There was a significant difference when they were compared(t=7.66,P<0.05).Conclusions The compressive strength of the veneers incneases significandv when the mottled teeth are irradiated by pulse Nd:YAG laser.This method is worthy of recommending.%目的 观察氟斑牙经脉冲Nd:YAG激光照射后贴面的抗压强度变化.方法 取因各种原因而拔除的人上颌中切、侧切氟斑牙各30颗,每种切牙均分成试验组和对照组,每组15颗.试验组牙齿以脉冲Nd:YAG激光照射后.再以37%的磷酸酸蚀;而对照组牙齿只用37%的磷酸酸蚀,然后所有牙齿做树脂贴面,在Instron 4505电子万能试验机上进行压缩试验,测定切牙的试验组、对照组贴面的平均破坏载荷.结果 试验组和对照组中切牙贴面平均破坏载荷分别为(0.342 4-0.053)、(0.289±0.041)kN,试验组明显高于对照组,两组比较差异有统计学意义(t=3.16,P<0.05);试验

  5. Preparation of A Compound Beverage with Inulin of Jerusalem Artichok, Hawthorn and Chrysanthemum%菊芋菊糖、山楂、菊花复合饮料的研制

    Institute of Scientific and Technical Information of China (English)

    李伟; 朱畅

    2016-01-01

    The hot water was used to extract inulin. Through orthogonal test the optimal conditions of extract in-ulin were:the ratio of sample to water was 1∶25 (g/g),temperature 90℃,time 60 min. Under these conditions, the extract ratio was 79.98 %. Inulin of jerusalem artichoke ,hawthorn and chrysanthemum were used as the main materials,added white granulate sugar,honey and other accessories. A discussion was carried out on the key technologies,through single factor and orthogonal experimental design ,the sensory score was investigated an indicator to determine the optimum formula of the compound beverage. The results showed that the mixing proportion of hawthorn extract and chrysanthemum extract was 2∶3(mL/mL),inulin 2%,white granulate sugar 4%,honey 3%,the best stabilizer was sodium alginate 0.05%and CMC-Na 0.1%. The compound beverage is nutritions and good for health,can be developed with good color, flavor and taste.%采用热水浸提法对菊糖进行提取,通过正交试验确定了提取菊糖的最佳条件为:料水比1∶25(g/g),温度90℃,提取时间60 min,菊糖提取率为79.98%。以菊芋菊糖、山楂、菊花为主要原料,添加白砂糖、蜂蜜等辅料。针对其关键技术进行了探讨,采用单因素和正交试验设计,以产品感官评价为指标,确定菊芋菊糖、山楂、菊花复合饮料的最佳工艺配方。结果表明:山楂和菊花提取液比为2∶3(mL/mL)、菊芋菊糖2%、白砂糖4%、蜂蜜3%、最佳稳定剂为0.05%海藻酸钠和0.1%CMC-Na。该复合饮料具有营养、保健的功能,色泽、香味、口感俱佳。

  6. Molecular genetic analysis of virus isolates from wild and cultivated plants demonstrates that East Africa is a hotspot for the evolution and diversification of sweet potato feathery mottle virus.

    Science.gov (United States)

    Tugume, Arthur K; Cuéllar, Wilmer J; Mukasa, Settumba B; Valkonen, Jari P T

    2010-08-01

    Sweet potato feathery mottle virus (SPFMV, genus Potyvirus) is globally the most common pathogen of cultivated sweet potatoes (Ipomoea batatas; Convolvulaceae). Although more than 150 SPFMV isolates have been sequence-characterized from cultivated sweet potatos across the world, little is known about SPFMV isolates from wild hosts and the evolutionary forces shaping SPFMV population structures. In this study, 46 SPFMV isolates from 14 wild species of genera Ipomoea, Hewittia and Lepistemon (barcoded for the matK gene in this study) and 13 isolates from cultivated sweet potatoes were partially sequenced. Wild plants were infected with the EA, C or O strain, or co-infected with the EA and C strains of SPFMV. In East Africa, SPFMV populations in wild species and sweet potato were genetically undifferentiated, suggesting inter-host transmission of SPFMV. Globally, spatial diversification of the 178 isolates analysed was observed, strain EA being largely geographically restricted to East Africa. Recombination was frequently detected in the 6K2-VPg-NIaPro region of the EA strain, demonstrating a recombination 'hotspot'. Recombination between strains EA and C was rare, despite their frequent co-infections in wild plants, suggesting purifying selection against strain EA/C recombinants. Positive selection was predicted on 17 amino acids distributed over the entire coat protein in the globally distributed strain C, as compared to only four amino acids in the coat protein N-terminus of the EA strain. This selection implies a more recent introduction of the C strain and a higher adaptation of the EA strain to the local ecosystem. Thus, East Africa appears as a hotspot for evolution and diversification of SPFMV.

  7. Element geochemical characteristics of the reticulate red clay in southern China and its significance for the formation proccess of reticulated mottles%中国南方网纹红土元素地球化学特征及其对网纹化过程的指示意义

    Institute of Scientific and Technical Information of China (English)

    徐传奇; 廖富强; 贾玉连; 黄思源; 连丽聪; 凌超豪; 龙进

    2016-01-01

    中国南方网纹红土是在季风气候条件下形成的一种特殊地层,对重建南方第四纪气候环境具有特殊重要的意义,但长期以来对网纹化过程的物化特点缺乏足够的认识。对江西九江、彭泽与湖南岳阳3个剖面的黏土质网纹红土中白色网纹和红色基质分离后进行了地球化学元素、游离铁含量等测试,结果表明:(1)白色网纹中,发生了 Fe、Mn、Th、Ga、Cu、Zn、Co、Ni、Cr、V 等元素的显著亏损,SiO2、Zr、Hf及轻稀土元素的显著富集,游离铁含量较低;红色基质中则完全相反;(2)网纹中 Fe2+含量较高,基质中含量较低,揭示了网纹倾向于还原环境,基质倾向于氧化环境。研究认为网纹和基质这种氧化还原差异,是 Fe、Mn、Co、Ni、Cr、V、Zn、Th、Ga、Cu等元素在网纹中游离淋失,并在基质中的沉淀富集,造成 Zr、SiO2及轻稀土等在网纹中的相对富集、在基质中“稀释”而呈现亏损的主要原因。%Reticulate red clay in southern China is a kind of special stratum that formed in a monsoon climate condition,which is of great significance to reconstruct the Quaternary climate environment.For a long time,there is a lack of adequate understanding of physical and chemical characteristics of the forma-tion process of reticulated mottles.Three sections of reticulate red clay,which were located in the Jiujiang and Pengze of Jiangxi Province,and Yueyang of Hunan Province,were studied,and the red matrix and the white reticulated mottles were separated and the geochemical elements, free iron content and so on were analysed.The results show that: (1 ) In the white reticulated mottles,Fe,Mn,Th,Ga,Cu, Zn,Co,Ni,Cr,V elements are outstanding leaching,while Zr,SiO2,Hf and light rare earth ele-ments are obvious enriched,and the content of free iron are low;in the red matrix,they are reversed. (2) Fe2+content is higher in the white reticulate,while lower

  8. "Mancha-cafe" em soja: seleção para resistência e interação entre genótipos e épocas de inoculação Seedcoat mottling in soybeans: selection for resistance and interaction between genotypes and inoculation date

    Directory of Open Access Journals (Sweden)

    André Luiz Lourençao

    1996-01-01

    infectadas no estádio vegetativo. Esses resultados fortalecem a diretriz utilizada no programa de melhoramento da Seção de Leguminosas do IAC: a de eliminar plantas e/ou linhagens com incidência de "mancha-café".The soybean mosaic virus (SMV is widespread in all soybean production areas. The mottled brown seed is the most characteristic symptom under our conditions, so in Brazil the disease was called "mancha-café" (coffee-spot. The mottling was the main limiting factor to the seed production in the certification system. The present paper had two objetives: screenning lines with different levels of mottled seeds, and to verify the interaction between selected genotypes and inoculation dates. During 1987, 131 F4:5 experimental lines from the cross IAC78-2318 x Santa Rosa, both susceptible to SMV, were evaluated under field conditions in Campinas (SP, Brazil. In the next year, seventeen selected lines plus the cultivars Santa Rosa, representing the five levels of mottling were planted again under field conditions in randomized complete-block design, with six replications. The results showed that the screenning realized in the field was efficient to identify the lines with different levels of mottled seeds. It was also observed that this characteristic was not much influenced by environmental effects as indicated by the positive and high correlation between diseases notes of both years, as well as the low value of the coefficient of variation. An additional study was carried out under greenhouse conditions to evaluate genotypes in distinct growth stages when mechanically inoculated with the virus. It consisted of a factorial experiment, involving a non-inoculated control, three inoculation times, and five lines representing notes from 1 to 5, plus the cultivars Santa Rosa, IAC-Santa Rosa PC and IAC-Santa Rosa DF. The genotypes were sowed in plastic bags and at the maturity, the following evaluations were made: the mottled seed rate, seed production (g/3 plants, mass (g of

  9. 香石竹斑驳病毒云南分离物全基因组序列测定和侵染性克隆构建%Sequence and construction of infectious cDNA clones of Carnation mottle virus isolate in Yunnan

    Institute of Scientific and Technical Information of China (English)

    王连春; 彭杰军; 郭维霞; 李晓鹏; 孔宝华; 陈海如

    2012-01-01

    香石竹斑驳病毒(Carnation mottle virus,CarMV)是危害香石竹的一种重要病毒,本研究通过构建农杆菌介导的CarMV侵染性克隆来进一步研究该病毒基因功能.首先获得CarMV云南分离物全长序列,与报道的上海分离物相似性达到94.78%;将CarMV全长cDNA基因序列构建到具有35S启动子的双元表达载体pCV-nGFP,通过农杆菌浸润到本氏烟中瞬时表达,本氏烟系统叶片RT-PCR能检测到CarMV.试验结果表明,本研究构建Car-MV侵染性克隆通过农杆菌介导可快速高效侵染植物,可以用于病毒基因功能研究;同时CarMV云南分离物全长序列测定结果表明其属于p164 K331组群.%Carnation mottle virus was a serious constraint to carnation. The objective of this study is to generate the Agrobacterium tumefacien-mediated infectious cDNA clones of Carnation mottle virus to study the gene function of the virus. Firstly, we got full cDNA sequences of CarMV from Yunnan Province, the nucleic acid similarity of which with Shanghai isolate was 94. 78%. The full-length cDNAs of CarMV were inserted into pCV-nGFP with a 35S promoter. They were then introduced into A. tumefacien, and infiltrated into Nicotiana benthami-ana . RT-PCR detection of systemic leaves of N. benthamiana showed that they were infected with CarMV. The result suggested that the Agrobacterium -mediated infection of N. benthamiana by the infectious cDNA clones of CarMV was successful and efficient, and it could be used to study the gene of virus. The full-length sequences of CarMV which isolated from Yunnan belonged to the group P164 K331.

  10. 昆明麝香石竹斑驳病毒分离物的鉴定与提纯及高效价抗血清的制备%Identification,purification and high efficiency antiserum preparation of carnation mottle virus in Kunming

    Institute of Scientific and Technical Information of China (English)

    李婷婷; 方琦; 丁铭; 苏晓霞; 张丽珍; 张仲凯

    2008-01-01

    对引起云南鲜切花麝香石竹植株叶斑驳、花朵变小的病毒分离物应用酶联免疫吸附测定(ELISA)和电子显微镜技术(IEM)检测,直径大约28 nm.经TAS-ELISA测定仅与CsrMV标准抗体反应为阳性.鉴定为麝香石竹斑驳病毒(Carnation mottle vi-rus,CarMV)的分离株.对病株检测筛选后进行分离纯化,将提纯后的CarMV制备兔抗血清获得高效价的抗体,间接ELISA测定为1:10240.

  11. Scientific Opinion on the substantiation of a health claim related to the combination of artichoke leaf dry extract standardised in caffeoylquinic acids, monacolin K in red yeast rice, sugar-cane derived policosanols, OPC from French maritime pine bark, garlic dry extract standardised in allicin, d-α-tocopheryl hydrogen succinate, riboflavin and inositol hexanicotinate in Limicol® and reduction of blood LDL-cholesterol concentrations pursuant to Article 14 of Regulation (EC No 1924/2006

    Directory of Open Access Journals (Sweden)

    EFSA Panel on Dietetic Products, Nutrition and Allergies (NDA

    2013-07-01

    Full Text Available Following an application from Laboratoire Lescuyer, submitted pursuant to Article 14 of Regulation (EC No 1924/2006 via the Competent Authority of France, the Panel on Dietetic Products, Nutrition and Allergies (NDA was asked to deliver an opinion on the scientific substantiation of a health claim related to the combination of artichoke leaf dry extract standardised in caffeoylquinic acids, monacolin K in red yeast rice, sugar-cane derived policosanols, OPC from French maritime pine bark, garlic dry extract standardised in allicin, d-α-tocopheryl hydrogen succinate, riboflavin and inositol hexanicotinate in Limicol® and reduction of blood LDL-cholesterol concentrations. The Panel considers that the food which is the subject of the claim is sufficiently characterised. The Panel considers that reduction of blood LDL-cholesterol concentrations is a beneficial physiological effect. High LDL-cholesterol is a risk factor in the development of coronary heart disease. In weighing the evidence, the Panel took into account that, although no evidence was provided for an LDL-cholesterol lowering effect of any of the single food constituents in Limicol® at the proposed conditions of use or as to how the ingredients individually or in any combination could contribute to the claimed effect and despite the lack of a dose-response relationship observed in one human intervention study, three human intervention studies conducted by two independent research groups showed an effect of the combination of food ingredients in Limicol® on blood LDL-cholesterol concentrations. The Panel concludes that a cause and effect relationship has been established between the consumption of the combination of artichoke leaf dry extract standardised in caffeoylquinic acids, monacolin K in red yeast rice, sugar-cane derived policosanols, OPC from French maritime pine bark, garlic dry extract standardised in allicin, d-α-tocopheryl hydrogen succinate, riboflavin and inositol

  12. 山东地区樱桃绿环斑驳病毒(CGRMV)的RT-PCR 检测及外壳蛋白基因的克隆%DETECTION OF CHERRY GREEN RING MOTTLE VIRUS (CGRMV) AND ISOLATION OF ITS COAT PROTEIN GENES FROM SWEET CHERRY IN SHANDONG PROVINCE

    Institute of Scientific and Technical Information of China (English)

    王文文; 宗晓娟; 陈立伟; 王甲威; 魏海蓉; 徐丽; 孟艳玲; 严雪瑞; 刘庆忠

    2012-01-01

    为调查我省甜樱桃感染樱桃绿环斑驳病毒(Cherry Green Ring Mottle Virus,CCRMV)情况,本研究以甜樱桃(Prunus avium L.)品种“红灯”叶片总RNA为模板,根据CGRMV基因组序列设计特异引物,对山东地区37份甜樱桃“红灯”样品进行RT - PCR检测,共检测出19份阳性样品.利用CGRMV外壳蛋白基因序列引物,从阳性植物样本中分离到约800bp的目的片段,克隆测序,序列分析显示该片段全长807 bp,编码268个氨基酸,与G enBank中已登录的CGRMV分离物的外壳蛋白基因序列一致性为87% ~97%,氨基酸序列相似性为95%~99%.该结果表明山东地区甜樱桃生产园中感染CGRMV的病例较为普遍.%In order to investigate the infection of Cherry Green Ring Mottle Virus (CGRMV) from sweet cherry ( Prunus avium L. ) in Shandong province, total RNA was extracted from the leaves of the sweet cherry cultivar Red Lamp' The specific primers were designed corresponding to the CGRMV genome sequence and used for the RT - PCR detection. Thirty - seven sweet cherry samples from six orchards were analyzed in the experiment and nineteen of them were detected as positive. The gene that encodes the virus coat protein was amplified and se-quenced. Sequence analysis revealed that the fragment was 807 nucleotides in length, encoding 268 amino acids. It shared 87% ~97% identity to the other CGRMV isolates reported in GenBank in the nucleotide level and 95% ~99% similarity in the amino acids level. These results showed CGRMV had been wide spread on sweet cherry in Shandong district.

  13. 西瓜感染黄瓜绿斑驳花叶病毒后糖的变化与倒瓤关系的研究%The relation between sugar change and blood-flesh of watermelon infected with Cucumber green mottle mosaic virus

    Institute of Scientific and Technical Information of China (English)

    李立梅; 吴元华; 赵秀香; 王文航; 王林; 蔡明

    2011-01-01

    By high performance liquid chromatography ( HPLC), the contents of glucose, fructose and sucrose, and the sweetness were analyzed in watermelon inoculated with Cucumber green mottle mosaic virus (CGMMV). The relationship between sugar change and blood-flesh of watermelon was determined. The results indicated that the content of glucose was apparently increased compared to that of the control before maturity (within 28 days after pollination), but reduced to 24.8% of the control after maturity (at 35 days after pollination). The content of fructose was higher than that of the control within 14 days after pollination, and then decreased with a significant difference. In all cases, the content of sucrose increased with the growth of watermelon. However, compared with the control, the sucrose content of watermelon inoculated with CGMMV was lower. The ratios of glucose, fructose and sucrose in the total sugar were abnormal. Coincidence with the changes of the total sugar, the fruit sweetness before maturity was higher than that of the control, whereas decreased sharply after maturity ( lower than that of the control). The inner pulp of the mature fruit appeared to be water-soaked and dirty red with no edibility. In a word, after inoculation with CGMMV, the changes of sugars and sweetness affected the watermelon quality.%@@ 黄瓜绿斑驳花叶病毒(Cucumber green mottle mosaic virus,CGMMV)是葫芦科作物上的重要病毒,2006年12月被农业部列为全国检疫性有害生物,2007年5月又被列为中华人民共和国进境植物检疫性有害生物.西瓜感染该病毒后,果肉出现油渍状深色病变,种子周围形成暗紫红色空洞,变色组织软化溶解呈丝状纤维化,俗称血瓤或倒瓤,果味异样,丧失食用价值[1].

  14. 新型菊芋秸秆-烟煤混合固体燃料添加剂的选择与燃烧性能分析%Selecting additives for optimum combustion performance of a new-type Jerusalem artichoke-bituminous coal solid biofuel pellets

    Institute of Scientific and Technical Information of China (English)

    常子磐; 郭加汛; 赵耕毛; 王长海

    2016-01-01

    Jerusalem artichoke biomass has been used to produce biofuel and can also improve the combustion performance of bituminous coal after adding to the coal. However, Jerusalem artichoke-bituminous coal solid biofuel pellets(JAC pellets)still produce large amount of slag during combustion. Here we examined the combustion characteristics of JAC pellets after mixing with MgCO3, CaCO3, Al2O3 and Al2Si2O5(OH)5 at 3%(m﹕m)to select additives for optimum combustion performance of JAC pellets. Results showed that adding additives decreased slag-ging rates to a great extent, while absorbed acid gases effectively. Addition of CaCO3 resulted in a significant reduction in ash content and Ringelman emittance. In summary, CaCO3 improved the combustion performance of the JAC pellets and could be a promising additive for JAC pellets.%在研制新型菊芋秸秆-烟煤混合固体燃料的基础上,筛选不同添加剂[MgCO3、CaCO3、Al2O3、Al2Si2O5(OH)5]优化燃料,以提高生物质混合固体燃料的燃烧性能。将四种添加剂以3%比例(质量比)与菊芋秸秆-烟煤混合固体燃料混合,比较了不同添加剂对混合固体燃料的灰分、结渣率、放热量、烟黑、灰熔点、烟气成分等的影响。结果表明:四种添加剂对酸性气体有明显的吸附作用,且能有效降低混合固体燃料的结渣率,其中CaCO3添加剂使混合固体燃料的灰分含量、烟黑的林格曼指数下降最为明显。这表明, CaCO3添加剂能有效缓解混合固体燃料中的灰分、烟黑、酸性气体的生成,提高其燃烧性能,是一种较为理想的新型菊芋秸秆-烟煤混合固体燃料添加剂。

  15. Cadmium-induced Membrane Lipid Peroxidation and Changes in Antioxidant Enzyme Activities and Peroxidase Isoforms in Jerusalem Artichoke Seedlings%镉诱导的菊芋幼苗膜脂过氧化和抗氧化酶活性及过氧化物酶同工酶的改变

    Institute of Scientific and Technical Information of China (English)

    陶毅明; 陈燕珍; 梁杨琳; 徐美燕; 徐祥明

    2007-01-01

    Jerusalem artichoke (Helianthus tuberosus L.)seedlings cultured in sandy media were treated with Hoagland nutrition solution with different concentrations of Cd(NO3)2 from 0 to 400 μmol/L. After 50 days' treatment, Cd accumulation, activities of peroxidase (POD, EC 1.11.1.7), superoxide dismutase (SOD, EC 1.15.1.1), catalase (CAT, EC 1.11.1.6) were measured and electrophoretograms of POD isoenzymes were analyzed. The accumulation of Cd in seedlings increased from Cd 50-100 μmol/L, after which further increases in Cd concentration resulted in only small increases in accumulation of Cd in seedlings. MDA content was markedly higher than control values indicating the enhanced membrane lipid peroxidation in roots and leaves. POD activities in leaf and root extracts increased with an increase of Cd concentration from 0 to 50 and 100 μmol/L and then decreased with further increases to 200 and 400 μmol/L. Under moderate Cd level of 50-200 μmol/L,SOD activities in leaf and root extracts increased whereas with a higher Cd level of 400 μmol/L marked inhibitions in enzyme activities were observed. With increase in Cd concentration marked elevations in CAT activities in leaves and roots were observed. Results of electrophoresis show that the alteration of POD isoenzyme was noticeable to Cd and an additional POD isoenzyme LP10 appeared. It is suggested that POD isoenzyme of Jerusalem artichoke seedlings could be used as bioindicator for soil contamination by Cd.%用含有不同浓度(0~400 μmol/L)Cd(NO3)2的Hoagland营养液处理砂培的菊芋.处理50 d后,测定植物体内镉积累量以及过氧化物酶(POD)、超氧化物歧化酶(SOD)、过氧化氢酶(CAT)活性,并对POD同工酶进行电泳分析.发现在Cd 50~100 μmol/L浓度内,随着镉浓度的升高,菊芋根和叶中镉的积累量显著增加,而随后积累量的增加有所减少.根和叶中MDA含量显著上升,说明镉引起了膜脂过氧化.0~100 μmol/L Cd处理,根和叶中POD活性

  16. Detection of Strawberry mottle virus and Strawberry mild yellow edge virus with multiplex RT-PCR based on internal control%利用内标为基础的多重 RT-PCR 技术检测草莓斑驳病毒和草莓轻型黄边病毒

    Institute of Scientific and Technical Information of China (English)

    王红; 王菁菁; 张科立; 成卓敏

    2014-01-01

    草莓斑驳病毒(SMoV)和草莓轻型黄边病毒(SMYEV)分布较广,危害较重。应用CTAB法提取草莓总RNA,以优质的草莓总RNA为模板,结合扩增内标的检测体系,建立了SMoV和SMYEV的多重RT-PCR检测体系,可以对草莓田间植株和试管苗进行快速稳定的病毒检测。%Strawberry mottle virus(SMoV) and Strawberry mild yellow edge virus(SMYEV), which are found world-wide, can cause serious crop losses .Total RNA for reverse transcriptase-polymerase chain reaction ( RT-PCR) was extracted from strawberry with CTAB method .A multiplex RT-PCR assay was used for simultaneous detecting SMoV and SMYEV based on ndh B gene as the internal control .Both field plants and test-tube plantlets of strawberries were detected effectively .

  17. Efecto de una generación de endocría sobre caracteres vegetativos y productivos en dos estructuras familiares de alcaucil Effect of one generation of selfing over vegetative and productive traits in two family structures of globe artichoke

    Directory of Open Access Journals (Sweden)

    Vanina P. Cravero

    2002-09-01

    Full Text Available El alcaucil (Cynara scolymus L. es una especie alógama cuyos cultivares no son aptos para ser propagados a través de semillas debido a su elevada heterocigosis. Para obtener materiales genéticamente homogéneos es necesario producir líneas endocriadas que pueden ser utilizadas directamente u obtener híbridos a través de ellas. Los objetivos del presente trabajo fueron evaluar el efecto de una generación de endocría sobre los caracteres tanto vegetativos como productivos y determinar la existencia de variabilidad genética entre las familias S1 a través de la estimación del Grado de Determinación Génico (G.D.G. en dos estructuras familiares diferentes. Se utilizaron 2 conjuntos de familias S1 provenientes uno de ellos de cruzamientos dirigidos entre clones y el otro por cruzamientos al azar de los mismos clones. Se evaluaron, en plantas individuales, caracteres productivos y vegetativos. Los resultados obtenidos ponen de manifiesto la importancia del material de origen para la obtención de líneas con buen comportamiento agronómico. La generación S1 originada de plantas half-sibs no sería la más adecuada para la obtención de líneas ya que manifestaron una mayor depresión endogámica para la mayoría de los caracteres que las originadas de plantas full-sibs. Si bien los principales caracteres de interés selectivo manifestaron depresión endogámica, la variabilidad existente entre conjuntos, entre familias S1 y entre plantas dentro de familias permitiría elegir plantas individuales con buenas características agronómicas adecuadas para continuar el proceso de endocría o para ser propagadas clonalmente.Globe artichoke (Cynara scolymus L. is an allogamous species where vegetative propagated cultivars are not suitable for seed multiplication due to their high heterozigous condition. To obtain homogeneous materials, the inbreeding process is necessary. Inbred lines could be used as cultivars or in hybrid combinations. The

  18. Mottled Mice and Non-Mammalian Models of Menkes Disease

    OpenAIRE

    malgorzata elenartowicz; Wojciech eKrzeptowski; Paweł eLipinski; Pawel eGrzmil; Rafał eStarzyński; Olga ePierzchała; Lisbeth Birk eMøller

    2015-01-01

    Menkes disease is a multi-systemic copper metabolism disorder caused by mutations in the X-linked ATP7A gene and characterized by progressive neurodegeneration and severe connective tissue defects. The ATP7A protein is a copper (Cu)-transporting ATPase expressed in all tissues and plays a critical role in the maintenance of copper homeostasis in cells of the whole body. ATP7A participates in copper absorption in the small intestine and in copper transport to the central nervous system (CNS) a...

  19. Mottled Mice and Non-Mammalian Models of Menkes Disease

    DEFF Research Database (Denmark)

    Lenartowicz, Małgorzata; Krzeptowski, Wojciech; Lipiński, Paweł;

    2015-01-01

    role in the maintenance of copper homeostasis in cells of the whole body. ATP7A participates in copper absorption in the small intestine and in copper transport to the central nervous system (CNS) across the blood-brain-barrier (BBB) and blood-cerebrospinal fluid barrier (BCSFB). Cu is essential......Menkes disease is a multi-systemic copper metabolism disorder caused by mutations in the X-linked ATP7A gene and characterized by progressive neurodegeneration and severe connective tissue defects. The ATP7A protein is a copper (Cu)-transporting ATPase expressed in all tissues and plays a critical...

  20. Catalytic conversion of Jerusalem artichoke tuber into hexitols using the bifunctional catalyst Ru/(AC-SO3H)%双功能催化剂Ru/(AC-SO3H)催化转化菊芋根茎制备六元醇

    Institute of Scientific and Technical Information of China (English)

    周立坤; 李振雷; 庞纪峰; 郑明远; 王爱琴; 张涛

    2015-01-01

    菊芋根茎水解反应是主要的反应路径.在H2气氛下反应,糖类产率在1 h内达到最大值,然后开始逐渐降低,同时加氢产物逐渐增加.因此, H2气氛下反应过程中生成的糖类是中间产物.以菊芋根茎为原料,1%Ru/(AC-SO3H)催化剂循环使用4次后六元醇产率由87%降至55%;而以菊粉为原料,循环4次后六元醇产率略有降低. ICP测试表明, Ru催化剂并未流失,3次循环后催化剂的CO化学吸附表明, Ru的分散度由74.2%降至17.8%.这表明催化剂失活是由菊芋根茎中的杂质毒化Ru活性位点导致的.%Jerusalem artichoke tuber (JAT) was employed as a feedstock for production of hexitols under mild conditions over a sulfonated activated carbon supported Ru catalyst (Ru/(AC-SO3H)). In compari-son with conventional Ru/AC catalyst, the sulfonation process of the carbon support was observed to create abundant surface acid groups, which in turn function as the anchoring sites for Ru nano-particles, thus increasing the dispersion of Ru. Consequently, the bifunctional Ru/(AC-SO3H) catalyst displayed significantly enhanced activity in one-pot production of hexitols from JAT; the hexitols yield achieved 92.6% over the 3%Ru/(AC-SO3H) catalyst when the reaction was conducted at 373K and 6 MPa H2 for 3 h. The stability of the catalyst was also investigated, which showed a decreasing trend in the yield of sorbitol with the run number due to poisoning of Ru surface by the impurity in the JAT feedstock. In contrast, when pure inulin was used as the feedstock, the catalyst presented excellent stability in the successive four runs.

  1. Influence of a matrix on properties of mottled cast iron applied for mill rolls

    Directory of Open Access Journals (Sweden)

    J. Krawczyk

    2010-07-01

    Full Text Available Mill rolls are ones of the most expensive tools applied in plastic working processes and have to satisfy several criteria, which allow them to be used. Cast iron mill rolls, due to their fracture toughness and tribological properties, are the most often applied at hot-rolling in the last rolling stands. This results from the smallest dynamic loads of such rolling stands and the decisive influence of the surface quality of these tools on the surface quality of the rolled product. An improper microstructure of rolls can lead to their premature wearing, e.g. broken flanges, pivots twisting off etc. By means of the heat treatment the matrix microstructure and morphology of carbide precipitationscan be modified and this in-turn can influence cast iron properties.Determination of the influence of microstructure changes, caused by the heat treatment, on the properties of EN-GJN-HV300 low-alloycast iron, after its modification and spheroidization – is the aim of the present paper. Those changes are based on the formation pearlitic or bainitic matrices at the similar morphology of graphite and ledeburitic cementite precipitations. The performed investigations should enable designing the heat treatment of cast iron metallurgical rolls in such a way as to obtain the optimal microstructures for functional parameters of these type of tools. The influence of changing the pearlitic matrix into the bainitic one on such properties as: hardness, impact strength, tensile strength, creep limit, bending strength and a stress intensity factor KIc was investigated in this study. Samples for testing, the listed above mechanical properties, were taken from an industrial casting with care to have pieces of very similar crystallization conditions.

  2. First report of Maize chlorotic mottle virus and maize (corn) lethal necrosis in Kenya

    Science.gov (United States)

    In September 2011, high incidence of a new maize (Zea mays L.) disease was reported at lower elevations (1900 masl) in the Longisa division of Bomet County, Southern Rift Valley of Kenya. Later the disease was noted in Bomet Central division, spreading into the neighboring Chepalungu and Narok South...

  3. Detection and some properties of cowpea mild mottle virus isolated from soybean in Iran.

    Science.gov (United States)

    Tavassoli, M; Shahraeen, N; Ghorbani, S

    2008-12-01

    During 2006-2007 growing seasons, survey were carried to identify a virus disease causing mosaic of soybean in the field in Southern region (Khozestan Province) of Iran. To detect the viral infection, diseased leaf samples showing mild mosaic and leaf malformation were collected from soybean fields in Dezful, located in Khozestan Province. Infected samples were carried to the lab in a proper condition on ice packages. TPIA and DAS-ELISA serological tests were applied to identify the viral agent. To investigate the host-range, several indicator plants were mechanically inoculated under green-house condition. Seed transmission of CPMMV was examined using the seeds obtained from infected plants. The virus isolate was not found to be seed-borne in Clark variety of soybean. Different steps of ultracentrifugation including sucrose density gradient (10-40%) were carried out in order to obtain partial purified virus. On the basis of biological, serological and EM results, CPMMV-Carla virus was identified in the infected soybean samples. This is the first report of CPMMV infection of soybean in Iran.

  4. Molecular, serological and biological characterization of the emerging tomato mottle mosaic virus on tomato

    Science.gov (United States)

    For many years, Tobacco mosaic virus (TMV) and Tomato mosaic virus (ToMV) are the two major tobamoviruses that have a serious impact on tomato productions worldwide. These seed-borne and mechanically transmitted viruses are difficult to control. The most effective disease management has been the u...

  5. 2-D DIGE analysis of UV-C radiation-responsive proteins in globe artichoke leaves

    NARCIS (Netherlands)

    Falvo, S.; Carli, Di M.; Desiderio, A.; Benvenuto, E.; Moglia, A.; America, A.H.P.; Lanteri, S.; Acquadro, A.

    2012-01-01

    Plants respond to ultraviolet stress inducing a self-defence through the regulation of specific gene family members. The UV acclimation is the result of biochemical and physiological processes, such as enhancement of the antioxidant enzymatic system and accumulation of UV-absorbing phenolic compound

  6. Bagpipes and Artichokes: Surprise as a Stimulus to Learning in the Elementary Music Classroom

    Science.gov (United States)

    Jacobi, Bonnie Schaffhauser

    2016-01-01

    Incorporating surprise into music instruction can stimulate student attention, curiosity, and interest. Novelty focuses attention in the reticular activating system, increasing the potential for brain memory storage. Elementary ages are ideal for introducing novel instruments, pieces, composers, or styles of music. Young children have fewer…

  7. Effect of sugar concentration in Jerusalem artichoke extract on Kluyveromyces marxianus growth and ethanol production

    Energy Technology Data Exchange (ETDEWEB)

    Margaritis, A.; Bajpai, P.

    1983-02-01

    The effect of inulin sugars concentration on the growth and ethanol production by Kluyveromyces marxianus UCD (FST) 55-82 was studied. A maximum ethanol concentration of 102 g/liter was obtained from 250 g of sugars per liter initial concentration. The maximum specific growth rate varied from 0.44 h/sup -1/ at 50 g of sugar per liter to 0.13 h/sup -1/ at 300 g of sugar per liter, whereas the ethanol yield remained almost constant at 0.45 g of ethanol per g of sugars utilized.

  8. Potential of Jerusalem artichoke (Helianthus tuberosus L.) as a biorefinery crop

    DEFF Research Database (Denmark)

    Gunnarsson, Ingólfur Bragi; Svensson, S.-E.; Johansson, E.;

    2014-01-01

    of 11 different clones, harvested on three occasions during the fall and early winter of 2011. The results obtained showed that cellulose production per hectare was at least double compared to corn stover, rice straw, sugarcane bagasse and wheat straw, showing high bioethanol production potential...

  9. Environ: E00756 [KEGG MEDICUS

    Lifescience Database Archive (English)

    Full Text Available E00756 Artichoke Globe artichoke Medicinal herb Chlorogenic acid [CPD:C10468 C17147...terol [CPD:C08636] Cynara scolymus [TAX:59895] Asteraceae Artichoke leaves Major component: Cynarin [CPD:C10445] Medicina

  10. Virus-induced gene silencing and transient gene expression in soybean using Bean pod mottle virus infectious clones

    Science.gov (United States)

    Virus-induced gene silencing (VIGS) is a powerful and rapid approach for determining the functions of plant genes. The basis of VIGS is that a viral genome is engineered so that it can carry fragments of plant genes, typically in the 200-300 base pair size range. The recombinant viruses are used to ...

  11. Phylogeography of the mottled spinefoot Siganus fuscescens: Pleistocene divergence and limited genetic connectivity across the Philippine archipelago.

    Science.gov (United States)

    Ravago-Gotanco, R G; Juinio-Meñez, M A

    2010-10-01

    Historical isolation during Pleistocene low sea level periods is thought to have contributed to divergence among marine basin populations across the Coral Triangle. In the Philippine archipelago, populations in the South China Sea, Sulu Sea-inland seas, and Philippine Sea-Celebes Sea basins might have been partially isolated. Meanwhile, present-day broadscale oceanographic circulation patterns suggest connectivity between these basins. To evaluate hypotheses regarding the influence of historical and contemporary factors on genetic structure, phylogeographic patterns based on mitochondrial control region sequences for a reef-associated fish, Siganus fuscescens, were analysed. Three distinct lineages were recovered. One lineage was identified as the morphologically similar species Siganus canaliculatus, while two lineages are monophyletic with S. fuscescens. Clade divergence and demographic expansion in S. fuscescens occurred during the Pleistocene. A strong signal of latitudinal structure was detected (Φ(CT)  = 0.188), driven by marked differences in clade distribution: one clade is widely distributed (clade A), while a second clade (clade B) has a restricted northern distribution. Regional structure of clade A is consistent with the basin isolation hypothesis (Φ(CT)  = 0.040) and suggests isolation of the South China Sea (Φ(CT)  = 0.091). Fine-scale structure was observed in the South China Sea and south Philippine Sea, while Sulu Sea and inland seas were unstructured. Genetic structure across multiple spatial scales (archipelagic, regional, and fine-scale within basins) suggests the influence of vicariant barriers and contemporary limits to gene flow in S. fuscescens that may be influenced by oceanographic circulation, geographical distance between available habitats, and latitudinal temperature differences.

  12. Structural Transitions and Energy Landscape for Cowpea Chlorotic Mottle Virus Capsid Mechanics from Nanomanipulation in Vitro and in Silico

    NARCIS (Netherlands)

    Kononova, Olga; Snijder, Joost; Brasch, Melanie; Cornelissen, Jeroen; Dima, Ruxandra I.; Marx, Kenneth A.; Wuite, Gijs J. L.; Roos, Wouter H.; Barsegov, Valeri

    2013-01-01

    Physical properties of capsids of plant and animal viruses are important factors in capsid self-assembly, survival of viruses in the extracellular environment, and their cell infectivity. Combined AFM experiments and computational modeling on subsecond timescales of the indentation nanomechanics of

  13. Jerusalem artichoke (Helianthus tuberosus, L.) maintains high inulin, tuber yield, and antioxidant capacity under moderately-saline irrigation waters

    Science.gov (United States)

    The scarcity of good quality water in semiarid regions of the world is the main limiting factor for increased irrigated agriculture in those regions. Saline water is generally widely available in arid regions at reduced costs, and can be a viable alternative for crop irrigation. However, the literat...

  14. The Mottled Copper and Black Copper Run Through with Silver in Yunnan%云南的斑铜与乌铜走银

    Institute of Scientific and Technical Information of China (English)

    李晓岑

    2003-01-01

    斑铜和乌铜走银是云南著名的工艺品.它们工艺独特,在中国传统金属工艺品中具有重要的地位.作者多次到云南会泽、昆明等地实地调查和对民间艺人进行访谈,获得其大致的生产工艺和技术.以调查材料为基础,介绍和分析了生斑铜、熟斑铜和乌铜走银技术背景、工艺流程、技术原理、现状.

  15. Effect of Raspberry bushy dwarf virus, Raspberry leaf mottle virus, and Raspberry latent virus on plant growth and fruit crumbliness in ‘Meeker’ red Raspberry

    Science.gov (United States)

    Raspberry crumbly fruit in red raspberry (Rubus idaeus L.), widespread in the Pacific Northwest of the United States and British Columbia, Canada, is most commonly caused by a virus infection. Raspberry bushy dwarf virus (RBDV) has long been attributed as the causal agent of the disease. Recently, t...

  16. Belly-mottled little owl Athene brama poikila should be boreal owl (Aegolius funereus beickianus)%杂斑腹小鸮实为鬼鸮

    Institute of Scientific and Technical Information of China (English)

    2003-01-01

    @@ 杨岚等(1989)根据1964年12月采自四川宝兴县的雄性个体标本和1982年9月采自四川省雅江县八角楼的雌性个体标本,发表了横斑腹小(号鸟)的一个新亚种--杂斑腹小(号鸟),同时认为它的特征与其它横斑腹小(号鸟)亚种存在明显不同,有似于种级分化.

  17. Describing body shape within and between sexes and populations of the Mottled spinefoot fish, Siganus fuscescens (Houttuyn, 1782 collected from different bays in Mindanao Island, Philippines

    Directory of Open Access Journals (Sweden)

    Zarine M. Hermita

    2013-05-01

    Full Text Available The study was conducted to determine sexual dimorphism in body shapes of S. fuscescens infive selected bays in Mindanao Island, Philippines. Likewise, shape and size relationship was assessedwithin species and between populations of the fish. The method of landmark-based geometricmorphometrics was used to describe the body shapes and size of the fish. Twenty-five landmark pointswere digitized from images of 194 individuals and relative warp analysis was done. Thin-plate spline andManova/CVA were used in presenting shape variations, where in this study body shape characteristics ofthe fish from different populations were observed. Discriminant function analysis and Hotelling’s testshowever showed no sexual dimorphism in body shape for all the populations. Shape variations wereobserved to be size-dependent. Both sexes of S. fuscescens were different from all other populations forhaving small sizes.

  18. Study on extraction of inulin from jerusalem artichoke with pectinase%果胶酶浸提菊芋菊糖的研究

    Institute of Scientific and Technical Information of China (English)

    李雪雁; 陈晓前; 王玉丽

    2009-01-01

    Extraction of inulin with pectinase was studied.By means of orthogonal design,optimum parameters were confirmed as solid to liquid ratio 1 : 14, pectinase concentration 0.5%, extraction temperature 45℃, pH 4.0 and extraction time 120min.Under such condition,the average extracting rate of inulin was 11.56% ,it was more than the rate with hot water.%对果胶酶提取菊糖的工艺进行了研究.采用正交实验设计优化提取条件,确定固液比为1:14、添加果胶酶的浓度为0.5%、处理温度45℃、pH4.0、提取时间120min为最佳的提取工艺,在此条件下,菊糖的提取率平均为11.56%,高于热水浸提的提取率.

  19. Analysis of Phenolic Acids of Jerusalem Artichoke (Helianthus tuberosus L. Responding to Salt-Stress by Liquid Chromatography/Tandem Mass Spectrometry

    Directory of Open Access Journals (Sweden)

    Fujia Chen

    2014-01-01

    Full Text Available Plant phenolics can have applications in pharmaceutical and other industries. To identify and quantify the phenolic compounds in Helianthus tuberosus leaves, qualitative analysis was performed by a reversed phase high-performance liquid chromatography coupled with tandem mass spectrometry (HPLC-MS/MS and quantitative analysis by HPLC. Ten chlorogenic acids (CGAs were identified (3-o-caffeoylquinic acid, two isomers of caffeoylquinic acid, caffeic acid, p-coumaroyl-quinic acid, feruloylquinic acid, 3,4-dicaffeoyquinic acid, 3,5-dicaffeoylquinic acid, 1,5-dicaffeoylquinic acid, and 4,5-dicaffeoylquinic acid by comparing their retention times, UV-Vis absorption spectra, and MS/MS spectra with standards. In addition, four other phenolic compounds, including caffeoyl glucopyranose, isorhamnetin glucoside, kaempferol glucuronide, and kaempferol-3-o-glucoside, were tentatively identified in Helianthus tuberosus leaves for the first time. The 3-o-caffeoylquinic acid (7.752 mg/g DW, 4,5-dicaffeoylquinic acid (5.633 mg/g DW, and 3,5-dicaffeoylquinic acid (4.900 mg/g DW were the major phenolic compounds in leaves of Helianthus tuberosus cultivar NanYu in maturity. The variations in phenolic concentrations and proportions in Helianthus tuberosus leaves were influenced by genotype and plant growth stage. Cultivar NanYu had the highest concentration of phenolic compounds, in particular 3-o-caffeoylquinic acid and 4,5-dicaffeoylquinic acid compared with the other genotypes (wild accession and QingYu. Considering various growth stages, the concentration of total phenolics in cultivar NanYu was higher at flowering stage (5.270 mg/g DW than at budding and tuber swelling stages. Cultivar NanYu of Helianthus tuberosus is a potential source of natural phenolics that may play an important role in the development of pharmaceuticals.

  20. Preliminary Study of a Phenol Degradation Bacterium from Artichoke Endophytes%一株朝鲜蓟内生菌降解苯酚初步研究

    Institute of Scientific and Technical Information of China (English)

    雷湘华; 周鑫钰; 夏花; 朱宏建

    2013-01-01

    旨在筛选对苯酚耐受力较高的降解菌,获得降解苯酚的生物材料.本研究采用苯酚降解菌富集、分离技术从朝鲜蓟分离筛选到一株植物内生细菌菌株CXJ-1.经形态观察、生理生化鉴定及16S rDNA序列分析确定其种属,并采用4-氨基安替比林分光光度法,测定CXJ-1菌株对不同浓度苯酚的降解率.结果发现,CXJ-1与土生拉乌尔菌(Raoultella terrigena) (AB680714.1) 16S rDNA保守性片段有100%的同源性,可以将该菌株鉴定为土生拉乌尔菌菌(R.terrigena).该菌株对苯酚的最高耐受浓度达2500 mg/L,当苯酚浓度为1500mg/L时,菌株CXJ-1在42 h内能完全降解.本研究结果表明:菌株CXJ-1对由于农药的大量使用而导致苯酚残留的土壤及污水的处理具有较好的应用前景.

  1. One-step Ethanol Fermentation with Kluyveromyces marxianus YX01 from Jerusalem artichoke%一步法发酵菊芋生产乙醇

    Institute of Scientific and Technical Information of China (English)

    袁文杰; 任剑刚; 赵心清; 白凤武

    2008-01-01

    利用马克斯克鲁维酵母(Kluyveromyces marxianus)YX01具有菊粉酶生产能力且乙醇发酵性能良好的特点,直接发酵菊粉生成乙醇.在摇瓶中考察了该菌株最适发酵温度,进而在2.5L发酵罐中考察了通气量和底物浓度的影响.实验结果表明:该菌株最适发酵温度为35℃;在通气量为50 mL/min和100 mL/min时菌体生长加快,发酵时间缩短,但在不通气条件下糖醇转化率明显提高;在菊粉浓度235 g/L时,发酵终点乙醇浓度达到92.2 g/L,乙醇对糖的得率为0.436,为理论值的85.5%.在此基础上,使用近海滩涂种植海水灌溉收获的菊芋为底物,以批式补料方式直接发酵菊芋干粉浓度为280 g/L的底物,发酵终点乙醇浓度为84.0 g/L,乙醇对糖的得率为0.405,为理论值的80.0%.这些研究工作,为以菊芋为原料的燃料乙醇技术开发奠定了基础.

  2. 菊芋秸秆的稀酸水解及乙醇发酵%Ethanol production using stalk of Jerusalem artichoke by Kluyveromyces marxianus

    Institute of Scientific and Technical Information of China (English)

    相瑞娟; 尹思静; 侯胜博; 袁文杰

    2015-01-01

    菊芋作为一种非粮作物,块茎和秸秆均可以被微生物发酵生成乙醇.采用稀酸法对菊芋秸秆进行预处理,通过单因素实验,考察了预处理温度、预处理时间、稀酸浓度、料液比4个因素,得到的优化结果:料液比为1∶8,酸解温度为121℃,酸质量分数为1.5%,酸解时间为1h.此条件下水解菊芋秸秆,还原糖得率高达53.7%;预处理后的水解液在添加纤维素酶和木聚糖酶后,考察Kluyveromyces marxianus 1727的乙醇发酵能力,其同步糖化发酵与分步糖化发酵乙醇产量分别为25.91 g/L和25.63 g/L,生产效率分别是0.54 g/L/h和0.26 g/L/h.结果表明,稀酸水解的菊芋秸秆可用作底物生产燃料乙醇.

  3. Structure-based design and experimental engineering of a plant virus nanoparticle for the presentation of immunogenic epitopes and as a drug carrier.

    Science.gov (United States)

    Arcangeli, Caterina; Circelli, Patrizia; Donini, Marcello; Aljabali, Alaa A A; Benvenuto, Eugenio; Lomonossoff, George P; Marusic, Carla

    2014-04-01

    Biomaterials research for the discovery of new generation nanoparticles is one of the most active areas of nanotechnology. In the search of nature-made nanometer-sized objects, plant virus particles appear as symmetrically defined entities that can be formed by protein self-assembly. In particular, in the field of plant virology, there is plenty of literature available describing the exploitation of plant viral cages to produce safe vaccine vehicles and nanoparticles for drug delivery. In this context, we have investigated on the use of the artichoke mottled crinkle virus (AMCV) capsid both as a carrier of immunogenic epitopes and for the delivery of anticancer molecules. A dual approach that combines both in silico tools and experimental virology was applied for the rational design of immunologically active chimeric virus-like particles (VLPs) carrying immunogenic peptides. The atomic structures of wild type (wt) and chimeric VLPs were obtained by homology modeling. The effects of insertion of the HIV-1 2F5 neutralizing epitope on the structural stability of chimeric VLPs were predicted and assessed by detailed inspection of the nanoparticle intersubunit interactions at atomic level. Wt and chimeric VLPs, exposing on their surface the 2F5 epitope, were successfully produced in plants. In addition, we demonstrated that AMCV capsids could also function as drug delivery vehicles able to load the chemotherapeutic drug doxorubicin. To our knowledge, this is the first systematic predictive and empirical research addressing the question of how this icosahedral virus can be used for the production of both VLPs and viral nanoparticles for biomedical applications.

  4. Plant pharming of a full-sized, tumour-targeting antibody using different expression strategies.

    Science.gov (United States)

    Villani, Maria Elena; Morgun, Bogdan; Brunetti, Patrizia; Marusic, Carla; Lombardi, Raffaele; Pisoni, Ivan; Bacci, Camilla; Desiderio, Angiola; Benvenuto, Eugenio; Donini, Marcello

    2009-01-01

    The aims of this work were to obtain a human antibody against the tumour-associated antigen tenascin-C (TNC) and to compare the yield and quality of plant-produced antibody in either stable transgenics or using a transient expression system. To this end, the characterization of a full-sized human immunoglobulin G (IgG) [monoclonal antibody H10 (mAb H10)], derived from a selected single-chain variable fragment (scFv) and produced in plants, is presented. The human mAb gene was engineered for plant expression, and Nicotiana tabacum transgenic lines expressing both heavy (HC) and light (LC) chain were obtained and evaluated for antibody expression levels, in vivo assembly and functionality. Affinity-purified H10 from transgenics (yield, 0.6-1.1 mg/kg fresh weight) revealed that more than 90% of HC was specifically degraded, leading to the formation of functional antigen-binding fragments (Fab). Consequently, H10 was transiently expressed in Nicotiana benthamiana plants through an Agrobacterium-mediated gene-transfer system. Moreover, the use of the p19 silencing suppressor gene from artichoke mottled crinkle virus raised antibody expression levels by an order of magnitude (yields of purified H10, 50-100 mg/kg fresh weight). Approximately 75% of purified protein consisted of full-sized antibody functionally binding to TNC (K(D) = 14 nm), and immunohistochemical analysis on tumour tissues revealed specific accumulation around tumour blood vessels. The data indicate that the purification yields of mAb H10, using a transient expression system boosted by the p19 silencing suppressor, are exceptionally high when compared with the results reported previously, providing a technique for the over-expression of anticancer mAbs by a rapid, cost-effective, molecular farming approach.

  5. New ribosome-inactivating proteins with polynucleotide:adenosine glycosidase and antiviral activities from Basella rubra L. and bougainvillea spectabilis Willd.

    Science.gov (United States)

    Bolognesi, A; Polito, L; Olivieri, F; Valbonesi, P; Barbieri, L; Battelli, M G; Carusi, M V; Benvenuto, E; Del Vecchio Blanco, F; Di Maro, A; Parente, A; Di Loreto, M; Stirpe, F

    1997-12-01

    New single-chain (type 1) ribosome-inactivating proteins (RIPs) were isolated from the seeds of Basella rubra L. (two proteins) and from the leaves of Bougainvillea spectabilis Willd. (one protein). These RIPs inhibit protein synthesis both in a cell-free system, with an IC50 (concentration causing 50% inhibition) in the 10(-10) M range, and by various cell lines, with IC50S in the 10(-8)-10(-6) M range. All three RIPs released adenine not only from rat liver ribosomes but also from Escherichia coli rRNA, polyadenylic acid, herring sperm DNA, and artichoke mottled crinkle virus (AMCV) genomic RNA, thus being polynucleotide:adenosine glycosidases. The proteins from Basella rubra had toxicity to mice similar to that of most type 1 RIPs (Barbieri et al., 1993, Biochim Biophys Acta 1154: 237-282) with an LD50 (concentration that is 50% lethal) Bougainvillea spectabilis had an LD50 > 32 mg.kg-1. The N-terminal sequence of the two RIPs from Basella rubra had 80-93% identity, whereas it differed from the sequence of the RIP from Bougainvillea spectabilis. When tested with antibodies against various RIPs, the RIPs from Basella gave some cross-reactivity with sera against dianthin 32, and weak cross-reactivity with momordin I and momorcochin-S, whilst the RIP from Bougainvillea did not cross-react with any antiserum tested. An RIP from Basella rubra and one from Bougainvillea spectabilis were tested for antiviral activity, and both inhibited infection of Nicotiana benthamiana by AMCV.

  6. QTL Information Table: 779 [Q-TARO

    Lifescience Database Archive (English)

    Full Text Available Symptoms Resistance or Tolerance Other disease resistance yellow mottle virus (RYMV..., A., Sy, A.A., Fargette, D., and Ghesqui?re, A. (1998). Genetic basis and mapping of the resistance to rice yellow mottle

  7. Identification and Sequence Analysis of Liaoning Isolate of Pepper Mild Mottle Virus%辣椒轻斑驳病毒辽宁分离物的鉴定及序列分析

    Institute of Scientific and Technical Information of China (English)

    李晓冬; 安梦楠; 王冠中; 赵秀香; 吴元华

    2016-01-01

    采用鉴别寄主、血清学及RT-PCR检测的方法对采自辽宁省葫芦岛地区的辣椒病毒进行了分离与鉴定,并将克隆得到的病毒CP基因进行测序及同源性比较.结果表明:该病毒分离物可侵染辣椒(Capsicum frutescens)产生局部枯斑、系统斑驳或花叶;局部侵染普通烟(Nicotiana tabacum)、心叶烟(Nicotiana glutinosa)、三生烟(Nicotiana tabacum.var.samsun)、矮牵牛(Petunia hybrida)产生坏死枯斑,在曼陀罗(Datura stramonium)、洋酸浆(Physalis pubescens)和苋色藜(Chenopodium amaranticolor)上引起褪绿斑;不能侵染番茄(Lycopersicon esculentum)、葫芦(Lagenaria siceraria)、甜瓜(Cucumisnelo)、黄瓜(Cucumis sativus)、千日红(Gomphrena globosa)、白菜(Brassica pekinensis)、百日草(Zinnia elegans)、蚕豆(Vicia faba)和玉米(Zea mays).辣椒病叶、病果和种子及表现症状的鉴别寄主叶片经DAS-ELISA检测均证实存在辣椒轻斑驳病毒(Pepper mildmottle virus,PMMoV).通过RTPCR技术成功克隆获得该病毒CP基因,测序并分析其同源性表明,该分离物与GenBank上已报道的13个国内外PMMoV分离物同源性很高,核苷酸和氨基酸同源性均为94%~100%.将该分离物与其他13个PMMoV分离物的CP基因序列一起构建系统发育进化树分析表明,该分离物与各亚洲分离物亲缘关系密切,并与国内各分离物可能具有相同的进化祖先.综上所述,辽宁辣椒上发现的病毒可鉴定为辣椒轻斑驳病毒辽宁分离物(PMMoV-LN),此为辽宁辣椒生产区首次报道.由于PMMoV具有典型的种传特性,而我国目前尚未将其列为检疫对象,这将促进病毒的快速扩展蔓延,因此应重视该病毒的危害性及对我国辣椒生产的潜在威胁,并加强其抗病育种和检验检疫工作以达到对PMMoV防控的目的.

  8. Describing body shape within and between sexes and populations of the Mottled spinefoot fish, Siganus fuscescens (Houttuyn, 1782) collected from different bays in Mindanao Island, Philippines

    OpenAIRE

    Zarine M. Hermita; Jessie G. Gorospe; Mark Anthony J. Torres; Gil J. Lumasag; Cesar G. Demayo

    2013-01-01

    The study was conducted to determine sexual dimorphism in body shapes of S. fuscescens infive selected bays in Mindanao Island, Philippines. Likewise, shape and size relationship was assessedwithin species and between populations of the fish. The method of landmark-based geometricmorphometrics was used to describe the body shapes and size of the fish. Twenty-five landmark pointswere digitized from images of 194 individuals and relative warp analysis was done. Thin-plate spline andManova/CVA w...

  9. Study on strategy of pH control on the inulin extraction from Jerusalem artichoke%菊芋多糖提取过程中的pH控制策略研究

    Institute of Scientific and Technical Information of China (English)

    梁磊; 李平; 朱明军

    2012-01-01

    Two kinds of Jerusalem artichoke(rinsed and unrinsed) were used for inulin extraction at the condition of 85℃,solid/liquid ratio of 1:10,and the pH of 5.0~9.0.The reducing sugars concentration of the extraction increased with lower pH;while the protein concentration of the extraction increased with higher pH.The highest inulin concentration was reached at 100min.Considering the inulin concentration,the impurities(reducing sugars and protein) and the color of the extraction,the optimum extraction conditions for the unrinsed material and rinsed material were pH7.0,110min and pH7.0,100min,respectively.The inulin concentration and extraction rate for unrinsed material and rinsed material were 88.43g/L,76.46% and 86.10g/L,72.65%,respectively.%采用未漂洗和漂洗过的菊芋做原料,在pH5.0~9.0,85℃、固液比1:10下提取,并在60~120min每隔10min取样分析,得出如下结论:pH越低,提取液中的还原糖含量越高;pH越高,提取液中的蛋白质的含量越高;菊糖含量在100min左右达到最高值。考虑还原糖及蛋白质等杂质、脱色及菊糖的含量,未漂洗的原料最佳提取条件为pH7.0,提取110min,其菊糖含量为88.43g/L,菊糖提取率为76.46%;漂洗过的原料最佳提取条件则是pH7.0,提取100min,其菊糖含量为86.10g/L,菊糖提取率为72.65%。

  10. A Review of Jerusalem Artichoke(Helianthus tuberosus L.)Developing in Qinghai Plateau%青海高原菊芋(Helianthus tuberosus L.)开发研究述评

    Institute of Scientific and Technical Information of China (English)

    黄相国; 葛菊梅; 沈裕虎; 王海庆; 张怀刚

    2004-01-01

    对在青海高原开发野菜资源菊芋(Helianthus tuberosus L.)进行了述评.介绍了菊芋的生物学和生态学特性,栽培管理方法.菊芋块茎富含菊糖,经现代生物技术深加工后,可得菊粉(Inulin).再以菊粉为原料经菊粉酶(Inulinase EC3.2.1.7)水解可制成低聚果糖(Oligosaccharides)、超高果糖浆(Ultrahigh fructose Glucose Syrups UHFGS).菊粉、低聚果糖、超高果糖浆都是当今食品工业的一种全新的多功能配料,是全水溶性膳食纤维,同时还是双歧杆菌增殖因子,应用前景非常广阔.

  11. 一株原生质体融合菌株发酵菊芋生产酒精的工艺条件优化%Optimization of Alcoholic Fermentation of a Protoplast Fusion Strain from Jerusalem Artichoke

    Institute of Scientific and Technical Information of China (English)

    张秀兰; 李雪雁; 张维

    2011-01-01

    The fusant strain called R8 which can secrete inulinase and produce alcohol was chosen to optimize the alcoholic fermentation in order to get high-yielding alcohol fermentation conditions. The optimum condition confmned through six single factor experimen%将试验筛选的具有分泌菊粉酶和产乙醇性能的融合菌株R8进行酒精发酵条件优化,经过6个单因素试验和正交试验,得到的优化条件为:160g/LJAE(菊芋提取液),25g/LBE(牛肉膏),8g/LNH4H2PQ4,0.1g/LZnCl2,pH6.0,30℃,转速180r/min。最终酒精得率为46.30%,原料糖分利用率能达到84.96%。

  12. 以菊芋为主要营养基质的高活力乳酸菌发酵剂制备%Preparation of lactic acid bacteria starter with high quality from Jerusalem artichoke based medium

    Institute of Scientific and Technical Information of China (English)

    程新; 董英; 苏萍; 肖香; 史腊妮

    2014-01-01

    研究了在以菊芋为营养基质的培养基中添加营养因子对植物乳杆菌生长和发酵活力的影响.试验结果表明,菊芋可以作为乳酸菌培养的良好基质,葡萄糖、蛋白胨等营养成分的添加可以提高乳酸菌的增殖效果,在10%菊芋浸汁中添加2.5%的葡萄糖、4%植物蛋白胨及0.05%的MnSO4,经34℃发酵20 h后,乳酸菌最大菌浓可达3.5×109 CFU/mL左右,且菌体具备较高的发酵活力,当其应用于菊芋泡菜低温发酵时,发酵8d后泡菜体系的pH值下降至3.6左右,发酵液中的活菌数可达2.0×107 CFU/mL以上.Mn2+是乳酸菌体保持高发酵活力的重要因子,在培养基中缺乏Mn2+的情况下,发酵液中乳酸菌液活菌数并不会有显著的下降,但当其应用于菊芋泡菜发酵时,发酵后泡菜体系的pH值保持在4.0左右,发酵液中的活菌数也仅有1.2×107 CFU/mL左右,说明Mn2+的存在对于乳酸菌的发酵活力至关重要.

  13. 菊芋浓缩液对酸乳中益生菌的生长和功能的影响研究%Effect of Jerusalem artichoke juice on growth and functions of probiotics in yogurt

    Institute of Scientific and Technical Information of China (English)

    马亚宁; 杨伟东; 吕嘉枥

    2009-01-01

    将菊芋浓缩液按不同的量添加到脱脂鲜乳中,考察了复合酸乳的酸度和菌数以及菌体的生长情况,结果表明凝乳时的酸度和菌数都随着添加量的增多而增大;在以上实验的基础上,同时以菊芋复合酸乳对小鼠进行灌胃,结果发现以菊芋复合酸乳灌胃小鼠的肠道乳杆菌数比纯酸乳灌胃组小鼠和空白组都有提高,说明添加菊芋浓缩液的酸乳促进了小鼠肠道乳酸菌的增殖.

  14. 利用菊粉产山梨醇酵母融合菌株的构建%Construction of Intergeneric Yeast Fusant for Production Sorbitol from Jerusalem Artichoke

    Institute of Scientific and Technical Information of China (English)

    吴坤陆; 魏文铃; 秦燕; 谢忠; 汪琨

    2001-01-01

    介绍高产菊粉酶的克鲁维酵母(Kluyveromyces sp.)Y85菌株与产山梨醇的酿酒酵母(Saccharomyces cerevisiae) E15菌株,通过属间原生质体融合构建直接利用菊粉产山梨醇的酵母融合菌株.结果认为,以0.1%EDTA-巯基乙醇为脱壁预处理剂,蜗牛酶浓度2%(W/V),酶解温度30 ℃,E15和Y85两菌株细胞酶解时间分别为40 min和30 min,原生质体形成率和再生率分别达90%和25%以上.融合的适宜条件为:添加30%(W/V)PEG和10 mmol/L CaCl2,融合时间为30 min,融合率可达2.64×10-6以上.利用两亲株自然性状差异检出融合菌株,并经DNA含量、菊粉酶活性、细胞形态与大小、菌落形态等测定加以确证.其中F27融合菌株在适宜条件下,山梨醇摇瓶发酵产量可达4.87 g/100 mL,并且具有遗传稳定性能.

  15. Folin-Ciocalteu比色法测定朝鲜蓟叶片中多酚含量%Determination of Polyphenol Content in Artichoke Leaf by Folin-Ciocalteu Method

    Institute of Scientific and Technical Information of China (English)

    冯丽; 宋曙辉

    2011-01-01

    采用改进的Folin-Ciocalteu比色法测定朝鲜蓟叶片中的多酚含量;以没食子酸为对照品,对方法的精密度、重现性、回收率等进行了试验;用此方法比较了不同品种朝鲜蓟中的多酚含量.

  16. Cytochrome P450s from Cynara cardunculus L. CYP71AV9 andCYP71BL5, catalyze distinct hydroxylations in the sesquiterpenelactone biosynthetic pathway

    NARCIS (Netherlands)

    Eljounaidi, K.; Cankar, K.; Comino, C.; Moglia, A.; Hehn, A.; Bourgaud, F.; Bouwmeester, H.J.; Menin, B.; Lanteri, S.; Beekwilder, M.J.

    2014-01-01

    Cynara cardunculus (Asteraceae) is a cross pollinated perennial crop which includes the two cultivatedtaxa globe artichoke and cultivated cardoon. The leaves of these plants contain high concentrationsof sesquiterpene lactones (STLs) among which cynaropicrin is the most represented, and has recently

  17. 7 CFR 5.2 - Marketing season average price data.

    Science.gov (United States)

    2010-01-01

    ..., type 21; Kentucky-Tennessee fire-cured, types 22-23; burley, type 31; dark air-cured, types 35-36; sun... market Artichokes, asparagus, snap beans, broccoli, cabbage, cantaloupe, carrots, cauliflower,...

  18. ANALYSIS OF VARIANCE ECONOMICALLY VALUABLE TRAITS AND INTERIOR INDICATORS PIGS AT USE OF DIETARY SUPPLEMENTS "SELENIUM VITA" AND "TOPINAMBUR"

    OpenAIRE

    Fedorov V. H.; Gribtsova T. V.

    2015-01-01

    Studies were conducted on pure-bred pigs CT and DM-1. An analysis of variance of economically useful signs and interior indicators pigs using dietary supplements "Vita selenium" and "Jerusalem artichoke"

  19. Dicty_cDB: Contig-U04090-1 [Dicty_cDB

    Lifescience Database Archive (English)

    Full Text Available 585572 ) C009-G5 Acropora millepora presettlement library ... 54 8e-06 2 ( AY0964...(XYZ) Jerusalem artichoke H... 42 0.002 2 ( DY585594 ) C010-A3 Acropora millepora presettlement library ...

  20. Patiromer

    Science.gov (United States)

    ... warm the medication by heating it in a microwave, or adding it to heated foods or liquids. ... amount of potassium-rich foods such as artichokes, avocados, bananas, cantaloupe, grapefruit juice, milk, orange juice, potatoes, ...

  1. AcEST: DK948638 [AcEST

    Lifescience Database Archive (English)

    Full Text Available Fragment)... 35 0.35 sp|P35930|POL2_RCMV RNA1 polyprotein OS=Red clover mottle virus ... 33 1.0 sp|Q9STX0|WR...RSSELLKLL 347 >sp|P35930|POL2_RCMV RNA1 polyprotein OS=Red clover mottle virus PE=3 SV=1 Length = 1864 Score

  2. AcEST: DK960939 [AcEST

    Lifescience Database Archive (English)

    Full Text Available sp_hit_id P19199 Definition sp|P19199|POL_COYMV Putative polyprotein OS=Commelina yellow mottle virus Align...rotein OS=Commelina yellow mottle virus PE=4 SV=2 Length = 1886 Score = 32.0 bits (71), Expect = 3.0 Identit

  3. AcEST: DK953806 [AcEST

    Lifescience Database Archive (English)

    Full Text Available .1 sp|P23009|POL2_BPMV RNA2 polyprotein OS=Bean-pod mottle virus (s... 30 9.3 sp|... Sbjct: 394 GVETLGGITT 403 >sp|P23009|POL2_BPMV RNA2 polyprotein OS=Bean-pod mottle virus (strain Kentucky G

  4. AcEST: DK954722 [AcEST

    Lifescience Database Archive (English)

    Full Text Available 4.8 sp|P23009|POL2_BPMV RNA2 polyprotein OS=Bean-pod mottle virus (s... 31 4.8 sp|Q90ZZ9|PA21_ECHCO Phosphol...P23009|POL2_BPMV RNA2 polyprotein OS=Bean-pod mottle virus (strain Kentucky G7) P

  5. AcEST: BP921408 [AcEST

    Lifescience Database Archive (English)

    Full Text Available efinition sp|P15629|POL_SOCMV Enzymatic polyprotein OS=Soybean chlorotic mottle virus Align length 80 Score ...se OS=B... 30 9.9 >sp|P15629|POL_SOCMV Enzymatic polyprotein OS=Soybean chlorotic mottle

  6. QTL Information Table: 786 [Q-TARO

    Lifescience Database Archive (English)

    Full Text Available Area Under Symptoms Progression Curve (AUSPC) Resistance or Tolerance Other disease resistance yellow mottle...igenic families as potential candidates for partial resistance QTLs to Rice yellow mottle virus in rice. Theor Appl Genet 116, 53-62. ...

  7. AcEST: DK955035 [AcEST

    Lifescience Database Archive (English)

    Full Text Available 009|POL2_BPMV RNA2 polyprotein OS=Bean-pod mottle virus (s... 31 4.6 sp|Q90ZZ9|PA21_ECHCO Phospholipase A2 E...2_BPMV RNA2 polyprotein OS=Bean-pod mottle virus (strain Kentucky G7) PE=1 SV=2 L

  8. NCBI nr-aa BLAST: CBRC-PMAR-01-0304 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-PMAR-01-0304 ref|NP_619755.1| overlapping protein/movement protein [Physalis mottle... virus] emb|CAA76070.1| overlapping protein [Physalis mottle virus] NP_619755.1 8.7 33% ...

  9. AcEST: BP919794 [AcEST

    Lifescience Database Archive (English)

    Full Text Available _hit_id P11639 Definition sp|P11639|Y31K_MCMV Uncharacterized 31.5 kDa protein OS=Maize chlorotic mottle vir...zed 31.5 kDa protein OS=Maize chlorotic mottle virus PE=4 SV=1 Length = 289 Score = 29.6 bits (65), Expect =

  10. AcEST: DK963392 [AcEST

    Lifescience Database Archive (English)

    Full Text Available =... 32 2.6 sp|P23009|POL2_BPMV RNA2 polyprotein OS=Bean-pod mottle virus (s... 31 3.4 sp|Q6ZM86|GRD2I_DANRE...REK 263 >sp|P23009|POL2_BPMV RNA2 polyprotein OS=Bean-pod mottle virus (strain Ke

  11. QTL Information Table: 785 [Q-TARO

    Lifescience Database Archive (English)

    Full Text Available Area Under Symptoms Progression Curve (AUSPC) Resistance or Tolerance Other disease resistance yellow mottle...c families as potential candidates for partial resistance QTLs to Rice yellow mottle virus in rice. Theor Appl Genet 116, 53-62. ...

  12. AcEST: BP916040 [AcEST

    Lifescience Database Archive (English)

    Full Text Available O91259|O91259_PHMV Overlapping protein OS=Physalis mottle vir... 37 0.50 tr|Q4WRU0|Q4WRU0_ASPFU Putative unc...EEPTLPPPPK-----RPGAPNLRRNPPLPPFPATPSADPTCKHTG 1239 >tr|O91259|O91259_PHMV Overlapping protein OS=Physalis mottle

  13. AcEST: BP911576 [AcEST

    Lifescience Database Archive (English)

    Full Text Available 4 OS=Sacchar... 29 8.2 sp|Q01500|POLG_PEMVC Genome polyprotein OS=Pepper mottle v...SLKRKAIEEELKAEELDENAEEERIKEDWKEIVLQN 589 >sp|Q01500|POLG_PEMVC Genome polyprotein OS=Pepper mottle virus (is

  14. Dicty_cDB: Contig-U16568-1 [Dicty_cDB

    Lifescience Database Archive (English)

    Full Text Available 1( AY523538 |pid:none) Sweet potato feathery mottle virus... 39 0.83 CP000922_260...2 |pid:none) Sweet potato feathery mottle virus... 36 5.4 AL844509_417( AL844509 |pid:none) Plasmodium falci

  15. Dicty_cDB: Contig-U04511-1 [Dicty_cDB

    Lifescience Database Archive (English)

    Full Text Available 35 2.0 U35145_2( U35145 |pid:none) Parietaria mottle virus 3a protein and... 35 ...2.5 AM182746_2( AM182746 |pid:none) Parietaria mottle virus MP gene fo... 35 2.5 S66499( S66499 ) allergen L...romosome... 34 3.3 AM182748_2( AM182748 |pid:none) Parietaria mottle virus MP gene fo... 33 5.7 AM182749_2( ...AM182749 |pid:none) Parietaria mottle virus MP gene fo... 33 7.4 AM182744_2( AM18...2744 |pid:none) Parietaria mottle virus MP gene fo... 33 7.4 AJ427994_1( AJ427994 |pid:none) Human immunodef

  16. The "one-step" Bean pod mottle virus (BPMV)derived vector is a functional genomics tool for efficient overexpression of heterologous protein, virus-induced gene silencing and genetic mapping of BPMV R-gene in common bean (Phaseolus vulgaris L.)

    OpenAIRE

    Pflieger, Stéphanie; Blanchet, Sophie; Meziadi, Chouaïb; Richard, Manon; Thareau, Vincent; Mary, Fanny; Mazoyer, Céline; Geffroy, Valerie

    2014-01-01

    Background Over the last two years, considerable advances have been made in common bean (Phaseolus vulgaris L.) genomics, especially with the completion of the genome sequence and the availability of RNAseq data. However, as common bean is recalcitrant to stable genetic transformation, much work remains to be done for the development of functional genomics tools adapted to large-scale studies. Results Here we report the successful implementation of an efficient viral vector system for foreign...

  17. Incontinentia pigmenti achromians

    Science.gov (United States)

    ... Crossed eyes (strabismus) Hearing problems Increased body hair ( hirsutism ) Scoliosis Seizures Streaked, whirled or mottled patches of ... medical workup to discover any related medical problems. Treatment There is no treatment for the skin patches. ...

  18. QTL Information Table: 923 [Q-TARO

    Lifescience Database Archive (English)

    Full Text Available e yellow mottle virus. II. Evidence of a complementary epistasis between two QTLs. TAG Theoretical and App...lied Genetics 97, 1155-1161. http://dx.doi.org/10.1007/s001220051004 ...

  19. AcEST: BP914169 [AcEST

    Lifescience Database Archive (English)

    Full Text Available =Physcomit... 58 2e-07 tr|Q8BEQ1|Q8BEQ1_9VIRU ORF2a OS=Subterranean clover mottle virus... 34 3.2 tr|Q21DS5|...EREIERGVSIRESRKLDREWKRNIVIRPPPS 82 >tr|Q8BEQ1|Q8BEQ1_9VIRU ORF2a OS=Subterranean clover mottle virus PE=4 SV

  20. AcEST: DK962562 [AcEST

    Lifescience Database Archive (English)

    Full Text Available se OS=Archaeoglobus fulgid... 32 2.0 sp|P13561|VGNM_RCMV RNA2 polyprotein OS=Red clover mottle virus ... 31 ...+ VF+P Sbjct: 50 KKYTTQRKEVDRVEILSGVFEGLTTATPISMVVWNVDADSSAY---ESLKTVFRP 101 >sp|P13561|VGNM_RCMV RNA2 polyprotein OS=Red clover mott...le virus PE=3 SV=1 Length = 996 Score = 30.8 bits (68), Expect = 4.5 Identities = 1

  1. 77 FR 42654 - Trifloxystrobin; Pesticide Tolerance

    Science.gov (United States)

    2012-07-20

    ... AGENCY 40 CFR Part 180 Trifloxystrobin; Pesticide Tolerance AGENCY: Environmental Protection Agency (EPA). ACTION: Final rule. SUMMARY: This regulation establishes a tolerance for residues of trifloxystrobin in or on artichoke, globe. Bayer CropScience requested these tolerances under the Federal Food,...

  2. Assessing fibre-rich feedstuffs in pig nutrition: comparison of methods and their potential implications

    NARCIS (Netherlands)

    Sappok, M.A.; Pellikaan, W.F.; Verstegen, M.W.A.; Sundrum, A.

    2009-01-01

    BACKGROUND: In organic farming, roughage has to be added to pigs' daily rations for animal welfare reasons. Since little is known about how roughage affects pigs, seven carbohydrate-rich feedstuffs (corn silage, ryegrass, turnip leaf, turnip tuber, Jerusalem artichoke and two types of clover-ryegras

  3. Real-time study of the effect of different stress factors on lactic acid bacteria by electrochemical optical waveguide lightmode spectroscopy.

    Science.gov (United States)

    Németh, Edina; Adányi, Nóra; Halász, Anna; Váradi, Mária; Szendro, István

    2007-12-01

    Lactic acid bacteria play an important role in the fermentation of different food products. During the fermentation processes, lactobacilli are confronted with many inhibitor factors. These factors by themselves or in combination can influence the growth of lactic acid bacteria and their acidification capacity. The subject of our study was to monitor with a newly developed biosensing technique how the different chemical stress factors influence the survival of lactic acid bacteria. Electrochemical optical waveguide lightmode spectroscopy combines evanescent-field optical sensing with electrochemical control of surface adsorption processes. For optical sensing, a layer of indium tin oxide served as a high refractive index waveguide and as a conductive electrode, as well. Lactobacillus plantarum 2142 suspended in Jerusalem artichoke syrup was used in the experiments. Electrochemical optical waveguide lightmode spectroscopy measurements were undertaken by using OW 2,400c indium tin oxide coated waveguide sensors (MicroVacuum, Budapest, Hungary) and were performed in a flow-injection analyzer system. The bacterial cells were adsorbed in native form without any chemical binding on the surface of the sensor by ensuring polarizing potential (1V) and were exposed to different concentration of acetic acid/Jerusalem artichoke syrup, lactic acid/Jerusalem artichoke syrup and hydrogen peroxide/Jerusalem artichoke syrup solution for 1h, respectively, and the effect on bacteria cells was monitored. Results were compared to the traditional micro-assay method, and it can be assumed that after further investigations this new technique could be used in real-time application.

  4. Production of novel antioxidative phenolic amides through heterologous expression of the plant’s chlorogenic acid biosynthesis genes in yeast

    NARCIS (Netherlands)

    Moglia, A.; Comino, C.; Lanteri, S.; Vos, de C.H.; Waard, de P.; Beek, van T.A.; Goitre, L.; Retta, S.F.; Beekwilder, M.J.

    2010-01-01

    Phenolic esters like chlorogenic acid play an important role in therapeutic properties of many plant extracts. We aimed to produce phenolic esters in baker’s yeast, by expressing tobacco 4CL and globe artichoke HCT. Indeed yeast produced phenolic esters. However, the primary product was identified a

  5. Evaluation of the bioactive properties of avenanthramide analogs produced in recombinant yeast

    NARCIS (Netherlands)

    Moglia, Andrea; Goitre, Luca; Gianoglio, Silvia; Beekwilder, Jules

    2015-01-01

    Saccharomyces cerevisiae has been proven to be a valuable tool for the expression of plant metabolic pathways. By engineering a S. cerevisiae strain with two plant genes (4cl-2 from tobacco and hct from globe artichoke) we previously set up a system for the production of two novel phenolic compou

  6. 26 CFR 1.954-3 - Foreign base company sales income.

    Science.gov (United States)

    2010-04-01

    ... commodities” includes, but is not limited to, livestock, poultry, fish produced in fish farms, fruit... Artichokes sugar Asparagus Mint Avocadoes Mushrooms Barley Nectarines Beans Oats Beets Olives Blackberries... person wood pulp grown in country Y. Corporation A, by a series of processes, converts the wood pulp...

  7. 78 FR 53047 - Halosulfuron-methyl; Pesticide Tolerances

    Science.gov (United States)

    2013-08-28

    ... drinking water and in residential settings, but does not include occupational exposure. Section 408(b)(2)(C... the test animals. In the prenatal developmental toxicity study in rats, increases in resorptions, soft...: Human Health Risk Assessment for Proposed New Uses on Artichoke and Caneberry (Crop subgroup...

  8. Molecular Variability Within and Among Verticillium dahliae Vegetative Compatibility Groups Determined by Fluorescent Amplified Fragment Length Polymorphism and Polymerase Chain Reaction Markers.

    Science.gov (United States)

    Collado-Romero, Melania; Mercado-Blanco, Jesús; Olivares-García, Concepción; Valverde-Corredor, Antonio; Jiménez-Díaz, Rafael M

    2006-05-01

    ABSTRACT A degree of genetic diversity may exist among Verticillium dahliae isolates within vegetative compatibility groups (VCGs) that bears phytopathological significance and is worth investigating using molecular tools of a higher resolution than VCG characterization. The molecular variability within and among V. dahliae VCGs was studied using 53 artichoke isolates from eastern-central Spain, 96 isolates from cotton, 7 from cotton soil, and 45 from olive trees in countries of the Mediterranean Basin. Isolates were selected to represent the widest available diversity in cotton- and olive-defoliating (D) and -nondefoliating (ND) pathotypes, as well as for VCG. The VCG of 96 cotton and olive isolates was determined in this present study. Molecular variability among V. dahliae isolates was assessed by fluorescent amplified fragment length polymorphism (AFLP) analysis and by polymerase chain reaction (PCR) assays for DNA fragments associated with the D (462 bp) and ND (824 bp) pathotypes, as well as a 334-bp amplicon associated with D pathotype isolates but also present in some VCG2B isolates. Isolates from cotton were in VCG1A, VCG1B, VCG2A, VCG2B, and VCG4B and those from olive trees were in VCG1A, VCG2A, and VCG4B. Artichoke isolates included representatives of VCG1A, VCG2A, VCG2B (including a newly identified VCG2Ba), and VCG4B. AFLP data were used to generate matrixes of genetic distance among isolates for cluster analysis using the neighbor-joining method and for analysis of molecular variance. Results demonstrated that V. dahliae isolates within a VCG subgroup are molecularly similar, to the extent that clustering of isolates correlated with VCG subgroups regardless of the host source and geographic origin. VCGs differed in molecular variability, with the variability being highest in VCG2B and VCG2A. For some AFLP/VCG subgroup clusterings, V. dahliae isolates from artichoke grouped in subclusters clearly distinct from those comprising isolates from cotton and

  9. Virus-induced gene silencing reveals signal transduction components required for the Pvr9-mediated hypersensitive response in Nicotiana benthamiana.

    Science.gov (United States)

    Tran, Phu-Tri; Choi, Hoseong; Choi, Doil; Kim, Kook-Hyung

    2016-08-01

    Resistance to pathogens mediated by plant resistance (R) proteins requires different signaling transduction components and pathways. Our previous studies revealed that a potyvirus resistance gene in pepper, Pvr9, confers a hypersensitive response (HR) to pepper mottle virus in Nicotiana benthamiana. Our results show that the Pvr9-mediated HR against pepper mottle virus infection requires HSP90, SGT1, NDR1, but not EDS1. These results suggest that the Pvr9-mediated HR is possibly related to the SA pathway but not the ET, JA, ROS or NO pathways.

  10. Shell Colour Polymorphism in Bulla ampulla

    DEFF Research Database (Denmark)

    Cedhagen, Tomas

    1999-01-01

    Colour patterns of Bulla ampulla shells collected from Africa eastward to Pacific Islands were studied. 1\\vo common colour morphs were found. The typical morph is commonest. It is closely and finely mottled or all over with pinkish-gray on a creamy or flesh~tinted ground, with darker clouds......, irregular, V-shaped, or as longitudinal bands. The colouration of the other common morph is more uniform. It is lacking the darker clouds or bands and the colour is more greyish. The entire shell surface is densely mottled all over with small brown spots on a grey or beige background. Both morphs seem...

  11. Cowpea Mosaic Virus-Encoded Protease Does Not Recognize Primary Translation Products of M RNAs from Other Comoviruses

    OpenAIRE

    Goldbach, Rob; Krijt, Jette

    1982-01-01

    The protease encoded by the large (B) RNA segment of cowpea mosaic virus was tested for its ability to recognize the in vitro translation products of the small (M) RNA segment from the comoviruses squash mosaic virus, red clover mottle virus, and cowpea severe mosaic virus (CPsMV, strains Dg and Ark), and from the nepovirus tomato black ring virus. Like M RNA from cowpea mosaic virus, the M RNAs from squash mosaic virus, red clover mottle virus, CPsMV-Dg, and CPsMV-Ark were all translated int...

  12. The host range of Phomopsis cirsii

    DEFF Research Database (Denmark)

    Leth, Vibeke; Andreasen, Christian

    2012-01-01

    . An isolate PKDK101 of the fungus Phomopsiscirsii, which is virulent to C. arvense causing stem canker and die back was chosen to test the specificity of the fungus. A series of infection trials were successively carried out on 127 plant species (incl. ssp. and var.) belonging to 16 families in greenhouses...... echinus, Cirsiumvulgare and Cynaracardunculusvar.scolymus (artichoke) with symptoms such as restricted necrotic leaf spots and too early senescence or death of entire leaf. Eleven hosts for P. cirsii were recorded but despite the expanded range of hosts we expect that its host range will be within...... Cardueae.P.cirsii,poses multi-target potential against several annual and biennial weedy thistles from warmer climates. The pathogenicity of P. cirsii towards the artichoke, however, could limit its field of application especially in the Mediterranean area. The potential of P. cirsii as a control agent...

  13. Polyphenol Interactions Mitigate the Immunogenicity and Allergenicity of Gliadins.

    Science.gov (United States)

    Pérot, Maxime; Lupi, Roberta; Guyot, Sylvain; Delayre-Orthez, Carine; Gadonna-Widehem, Pascale; Thébaudin, Jean-Yves; Bodinier, Marie; Larré, Colette

    2017-03-01

    Wheat allergy is an IgE-mediated disorder. Polyphenols, which are known to interact with certain proteins, could be used to reduce allergic reactions. This study screened several polyphenol sources for their ability to interact with gliadins, mask epitopes, and affect basophil degranulation. Polyphenol extracts from artichoke leaves, cranberries, apples, and green tea leaves were examined. Of these extracts, the first three formed insoluble complexes with gliadins. Only the cranberry and apple extracts masked epitopes in dot blot assays using anti-gliadin IgG and IgE antibodies from patients with wheat allergies. The cranberry and artichoke extracts limited cellular degranulation by reducing mouse anti-gliadin IgE recognition. In conclusion, the cranberry extract is the most effective polyphenol source at reducing the immunogenicity and allergenicity of wheat gliadins.

  14. Determination of free inositols and other low molecular weight carbohydrates in vegetables.

    Science.gov (United States)

    Hernández-Hernández, Oswaldo; Ruiz-Aceituno, Laura; Sanz, María Luz; Martínez-Castro, Isabel

    2011-03-23

    Different low molecular weight carbohydrates including saccharides, polyalcohols, sugar acids, and glycosides have been identified and quantified in different edible vegetables from Asteraceae, Amarantaceae, Amarylidaceae, Brassicaceae, Dioscoreaceae, and Solanaceae families by gas chromatography-mass spectrometry. Apart from glucose, fructose, and sucrose, other saccharides such as sedoheptulose in chicory, spinach, cabbage, purple yam, eggplant, radish, and oak leaf lettuce, rutinose in eggplant skin, and a glycosyl-inositol in spinach have been identified. chiro-Inositol was found in all vegetables of the Asteraceae family (3.1-32.6 mg 100 g(-1)), whereas scyllo-inositol was detected in those of purple yam, eggplant, artichoke, chicory, escarole, and endive (traces-23.2 mg 100 g(-1)). α-Galactosides, kestose, glucaric acid, and glycosyl-glycerols were also identified and quantified in some of the analyzed vegetables. Considering the bioactivity of most of these compounds, mainly chicory leaves, artichokes, lettuces, and purple yam could constitute beneficial sources for human health.

  15. Learning to eat vegetables in early life: the role of timing, age and individual eating traits.

    Directory of Open Access Journals (Sweden)

    Samantha J Caton

    Full Text Available Vegetable intake is generally low among children, who appear to be especially fussy during the pre-school years. Repeated exposure is known to enhance intake of a novel vegetable in early life but individual differences in response to familiarisation have emerged from recent studies. In order to understand the factors which predict different responses to repeated exposure, data from the same experiment conducted in three groups of children from three countries (n = 332 aged 4-38 m (18.9±9.9 m were combined and modelled. During the intervention period each child was given between 5 and 10 exposures to a novel vegetable (artichoke puree in one of three versions (basic, sweet or added energy. Intake of basic artichoke puree was measured both before and after the exposure period. Overall, younger children consumed more artichoke than older children. Four distinct patterns of eating behaviour during the exposure period were defined. Most children were "learners" (40% who increased intake over time. 21% consumed more than 75% of what was offered each time and were labelled "plate-clearers". 16% were considered "non-eaters" eating less than 10 g by the 5th exposure and the remainder were classified as "others" (23% since their pattern was highly variable. Age was a significant predictor of eating pattern, with older pre-school children more likely to be non-eaters. Plate-clearers had higher enjoyment of food and lower satiety responsiveness than non-eaters who scored highest on food fussiness. Children in the added energy condition showed the smallest change in intake over time, compared to those in the basic or sweetened artichoke condition. Clearly whilst repeated exposure familiarises children with a novel food, alternative strategies that focus on encouraging initial tastes of the target food might be needed for the fussier and older pre-school children.

  16. FOOD SUPPLEMENTS BASED ON VEGETABLE RAW MATERIALS IN THE PRODUCTION OF BAKED GOODS AND PASTRIES

    OpenAIRE

    Tamazova S. U.; Lisovoy V. V.; Pershakova T. V.; Kasimirova M. A.

    2016-01-01

    The article provides an analysis of currently known technologies and methods of production of food supplements based on vegetable raw materials. It has been established that a great interest from the standpoint of macro and micronutrients we have for nutritional supplements baseв on artichoke. Our analysis led to the conclusion that, despite the significant number of developed and implemented newest technologies, the development of complex processing of vegetable raw materials to produce diet...

  17. 40 CFR 180.458 - Clethodim; tolerances for residues.

    Science.gov (United States)

    2010-07-01

    ... Parts per million Alfalfa, forage 6.0 Alfalfa, hay 10 Artichoke, globe 1.2 Asparagus 1.7 Bean, dry, seed 2.5 Beet, sugar, molasses 1.0 Beet, sugar, roots 0.20 Beet, sugar, tops 1.0 Brassica, head and stem..., legume group 6, except soybean 3.5 Vegetable, root, except sugar beet, subgroup 1B 1.0...

  18. ICE CREAM WITH A COMBINED COMPOSITION OF RAW MATERIALS

    Directory of Open Access Journals (Sweden)

    O. E. Khodyreva

    2013-01-01

    Full Text Available Dairy products are the product of daily demand. Nowadays actively assimilate new types of raw materials, tech-nology, formulation. One of the propagation methods of enriching dairy products is a combination of milk and vegetable raw materials. The possibility of making a concentrated paste of Jerusalem artichoke in dairy products was investigated. The ice cream sundae "Vanilla" was chosen as the object of research.

  19. Reasoned opinion on the modification of the existing MRLs for thiamethoxam and clothianidin in various crops

    OpenAIRE

    European Food Safety Authority

    2012-01-01

    In accordance with Article 6 of Regulation (EC) No 396/2005, Spain herewith referred to as the evaluating Member State Spain (EMS Spain), received and application from Syngenta Agro to modify the existing MRLs for the active substance thiamethoxam in artichokes, table olives and olives for oil production and for clothianidin in table olives and olives for oil production, based on the intended use of thiamethoxam. Spain received also another application from Syngenta Crop Protection AG to modi...

  20. Application of "magnetic tongue" to the sensory evaluation of extra virgin olive oil

    DEFF Research Database (Denmark)

    Lauri, Ilaria; Pagano, Bruno; Malmendal, Anders

    2013-01-01

    to describe sensory features. The availability of a number of instrumental techniques has opened up the possibility to calibrate the sensory perception. Here we have tested the potentiality of nuclear magnetic resonance spectroscopy as "magnetic tongue" to measure sensory descriptors in extra-virgin olive oil....... We were able to correlate the NMR metabolomic fingerprints of extra-virgin olive oil to the sensory descriptors: tomato, bitter, pungent, rosemary, artichoke, sweet, grassy and leaf....

  1. RAD tag sequencing as a source of SNP markers in Cynara cardunculus L.

    OpenAIRE

    Scaglione Davide; Acquadro Alberto; Portis Ezio; Tirone Matteo; Knapp Steven J; Lanteri Sergio

    2012-01-01

    Abstract Background The globe artichoke (Cynara cardunculus L. var. scolymus) genome is relatively poorly explored, especially compared to those of the other major Asteraceae crops sunflower and lettuce. No SNP markers are in the public domain. We have combined the recently developed restriction-site associated DNA (RAD) approach with the Illumina DNA sequencing platform to effect the rapid and mass discovery of SNP markers for C. cardunculus. Results RAD tags were sequenced from the genomic ...

  2. Penicillium subrubescens, a new species efficiently producing inulinase.

    Science.gov (United States)

    Mansouri, S; Houbraken, J; Samson, R A; Frisvad, J C; Christensen, M; Tuthill, D E; Koutaniemi, S; Hatakka, A; Lankinen, P

    2013-06-01

    Inulin is a reserve carbohydrate in about 15 % of the flowering plants and is accumulated in underground tubers of e.g. chicory, dahlia and Jerusalem artichoke. This carbohydrate consists of linear chains of β-(2,1)-linked fructose attached to a sucrose molecule. Inulinases hydrolyse inulin into fructose and glucose. To find efficient inulin degrading fungi, 126 fungal strains from the Fungal Biotechnology Culture Collection (FBCC) at University of Helsinki and 74 freshly isolated strains from soil around Jerusalem artichoke tubers were screened in liquid cultures with inulin as a sole source of carbon or ground Jerusalem artichoke tubers, which contains up to 19 % (fresh weight) inulin. Inulinase and invertase activities were assayed by the dinitrosalicylic acid (DNS) method and a freshly isolated Penicillium strain originating from agricultural soil (FBCC 1632) was the most efficient inulinase producer. When it was cultivated at pH 6 and 28 °C in 2 litre bioreactors using inulin and Jerusalem artichoke as a carbon source, inulinase and invertase activities were on day 4 7.7 and 3.1 U mL(-1), respectively. The released sugars analysed by TLC and HPLC showed that considerable amounts of fructose were released while the levels of oligofructans were low, indicating an exoinulinase type of activity. Taxonomic study of the inulinase producing strain showed that this isolate represents a new species belonging in Penicillium section Lanata-divaricata. This new species produces a unique combination of extrolites and is phenotypically and phylogenetically closely related to Penicillium pulvillorum. We propose the name Penicillium subrubescens sp. nov. (CBS 132785(T) = FBCC 1632(T)) for this new species.

  3. THE STUDY OF THE KINETICS OF DRYING FOOD RAW MATERIAL OF PLANT ORIGIN IN THE ACTIVE HYDRODYNAMIC REGIMES AND DEVELOPMENT OF DRYER ENGINEERING CALCULATION METHODS

    Directory of Open Access Journals (Sweden)

    A. N. Ostrikov

    2015-01-01

    Full Text Available Consumer properties of food raw material formed during the heat treatment. New physical, flavoring and aromatic properties of the products of plant origin, formed during drying due to substantial changes in the composition of the raw materia l occurring as a result of biochemical reactions. In the production of dried and roasted products is very important to follow the parameters that contribute to the passage of biochemical processes aimed at creating a product with high nutritional qualities, strong aroma and pleasant taste. We studied the basic kinetics of the drying process of food raw material (in terms of artichoke in a dense interspersed layer, which formed the basis for the rational choice of the drying regime with due consideration of changes in the moisture content of the product are studied. The nature of the effect of the dried product movement hydrodynamic conditions on a layer height and intensity of drying is established. As a result of food raw material drying process kinetics analysis (in terms of artichoke multistep drying regimes were chosen. Analysis of the artichoke particles drying by air, air-steam mixture and superheated steam intensity showed the presence of two parts: the horizontal one and gradually diminishing one. Kinetic laws of the artichoke drying process in a dense interspersed layer were the basis of engineering calculation of dryer with a transporting body in the form of a "traveling wave". Application of the dryer with the transporting body in the form of a "traveling wave" for food raw material drying allow to achieve uniform drying of the product due to the use of soft, gentle regimes of oversleeping while preserving to the utmost particles of the product; to improve the quality of the finished product through the use of interspersed layer that reduces clumping of product to be dried.

  4. Nutrient Intake of the Repatriated United States Army, Navy and Marine Corps Prisoners-of-War of the Vietnam War

    Science.gov (United States)

    1978-11-01

    Potato leaves Rau mui Coriandrum sativum Linn. Coriander Artichaut Cynar, cardulculus Linn. Artichoke Mang Tay Asparagus officinalis Linn. Asparagus...Ait. Sago Dua Bloa lan Pisum sativum Linn. Green peas Lentilles Lens esculenta Moench Lentils Hot sen Nelumbium speciosum Willd. Lotus Ngo sen Nelumbium...species Banana flowers Hoa hien Cucurbita papo Linn. Pumpkin Cu toi Allium sativum Linn. Garlic Cu don do Daucus carota Linn. Carrot Cu he Allium

  5. 40 CFR 180.544 - Methoxyfenozide; tolerances for residues.

    Science.gov (United States)

    2010-07-01

    ..., group 18, hay 150.0 Apple, wet pomace 7.0 Artichoke, globe 3.0 Avocado 0.6 Bean, dry, seed 0.24 Brassica... Cotton, gin byproducts 35 Cotton, undelinted seed 2.0 Cranberry 0.5 Feijoa 0.4 Fruit, pome, group 11 1.5... Jaboticaba 0.4 Leaf petioles subgroup 4B 25 Leafy greens subgroup 4A 30 Longan 2.0 Lychee 2.0 Mango 0.6...

  6. 40 CFR 180.298 - Methidathion; tolerances for residues.

    Science.gov (United States)

    2010-07-01

    ... million Almond, hulls 6.0 Artichoke, globe 0.05 Citrus, oil 420.0 Cotton, undelinted seed 0.2 Fruit, citrus, group 10, except tangerine 4.0 Fruit, pome, group 11 0.05 Fruit, stone, group 12 0.05 Mango 0.05 Nut, tree, group 14 0.05 Olive 0.05 Safflower, seed 0.5 Sorghum, forage, forage 2.0 Sorghum,...

  7. MediterrAsian Diet Products That Could Raise HDL-Cholesterol: A Systematic Review

    Science.gov (United States)

    Giacosa, Attilio; Morazzoni, Paolo; Guido, Davide; Grassi, Mario; Morandi, Gabriella; Bologna, Chiara; Allegrini, Pietro

    2016-01-01

    Background. High HDL-cholesterol (HDL-C) values are negatively correlated with cardiovascular diseases. This review analyses the effect of the supplementation with various Mediterranean diet products (artichoke, bergamot, and olive oil) and Asian diet products (red yeast rice) on the HDL-C value in dyslipidemic subjects. Methods. A systematic review has been done involving all the English written studies published from the 1st of January 1958 to the 31st of March 2016. Results. The results of this systematic review indicate that the dietary supplementation with red yeast rice, bergamot, artichoke, and virgin olive oil has promising effects on the increase of HDL-C serum levels. The artichoke leaf extract and virgin olive oil appear to be particularly interesting, while bergamot extract needs further research and the effect of red yeast rice seems to be limited to patients with previous myocardial infarction. Conclusions. Various MediterrAsian diet products or natural extracts may represent a potential intervention treatment to raise HDL-C in dyslipidemic subjects. PMID:27882320

  8. COMPARATIVE STUDY OF DIFFERENT METHODS OF HYDROLYSIS AND FERMENTATION FOR BIOETHANOL OBTAINING FROM INULIN AND INULIN RICH FEEDSTOCK

    Directory of Open Access Journals (Sweden)

    Camelia (Bonciu Neagu

    2012-03-01

    Full Text Available Bioethanol serves as liquid fuel or gasoline enhancer in many countries in response to the progressive depletion of the world’s energetic resources. Production of bioethanol from inulin rich raw materials has been a subject of great interest for many years due to the large amount of existing and not completely developed technologies. The aim of this work was to study three different methods for hydrolysis and fermentation of pure inulin and Jerusalem artichoke flour: separate hydrolysis by A. niger MIUG 1.15 strain as active producer of inulinase, in stationary phase and under agitation, followed by fructose fermentation and simultaneous hydrolysis and fermentation of inulin and Jerusalem artichoke flour respectively, in order to increase the yield of biotransformation of substrate into ethanol. The highest amount of ethanol was formed during simultaneous hydrolysis and fermentation, for both pure inulin and Jerusalem artichoke (Helianthus tuberosus tubers used as raw materials, of 16.2 g∙L-1 and 28.1 g∙L-1 respectively.

  9. MediterrAsian Diet Products That Could Raise HDL-Cholesterol: A Systematic Review.

    Science.gov (United States)

    Rondanelli, Mariangela; Giacosa, Attilio; Morazzoni, Paolo; Guido, Davide; Grassi, Mario; Morandi, Gabriella; Bologna, Chiara; Riva, Antonella; Allegrini, Pietro; Perna, Simone

    2016-01-01

    Background. High HDL-cholesterol (HDL-C) values are negatively correlated with cardiovascular diseases. This review analyses the effect of the supplementation with various Mediterranean diet products (artichoke, bergamot, and olive oil) and Asian diet products (red yeast rice) on the HDL-C value in dyslipidemic subjects. Methods. A systematic review has been done involving all the English written studies published from the 1st of January 1958 to the 31st of March 2016. Results. The results of this systematic review indicate that the dietary supplementation with red yeast rice, bergamot, artichoke, and virgin olive oil has promising effects on the increase of HDL-C serum levels. The artichoke leaf extract and virgin olive oil appear to be particularly interesting, while bergamot extract needs further research and the effect of red yeast rice seems to be limited to patients with previous myocardial infarction. Conclusions. Various MediterrAsian diet products or natural extracts may represent a potential intervention treatment to raise HDL-C in dyslipidemic subjects.

  10. MediterrAsian Diet Products That Could Raise HDL-Cholesterol: A Systematic Review

    Directory of Open Access Journals (Sweden)

    Mariangela Rondanelli

    2016-01-01

    Full Text Available Background. High HDL-cholesterol (HDL-C values are negatively correlated with cardiovascular diseases. This review analyses the effect of the supplementation with various Mediterranean diet products (artichoke, bergamot, and olive oil and Asian diet products (red yeast rice on the HDL-C value in dyslipidemic subjects. Methods. A systematic review has been done involving all the English written studies published from the 1st of January 1958 to the 31st of March 2016. Results. The results of this systematic review indicate that the dietary supplementation with red yeast rice, bergamot, artichoke, and virgin olive oil has promising effects on the increase of HDL-C serum levels. The artichoke leaf extract and virgin olive oil appear to be particularly interesting, while bergamot extract needs further research and the effect of red yeast rice seems to be limited to patients with previous myocardial infarction. Conclusions. Various MediterrAsian diet products or natural extracts may represent a potential intervention treatment to raise HDL-C in dyslipidemic subjects.

  11. Control of aphid-vectored and thrips-borne virus spread in lily, tulip, iris and dahlia by sprays of mineral oil, polydimethylsiloxane and pyrethroid insecticide in the field

    NARCIS (Netherlands)

    Asjes, J.; Blom-Barnhoorn, G.J.

    2001-01-01

    In this study control of spread by insect vectors of non-persistent Lily symptomless virus and Lily mottle virus in lily, Tulip breaking virus in tulip, Iris mild mosaic virus, Narcissus latent virus and Iris severe mosaic virus in bulbous iris, and semi-persistent Dahlia mosaic virus and persistent

  12. AcEST: DK944282 [AcEST

    Lifescience Database Archive (English)

    Full Text Available OS=Subterranean clover mottle virus... 34 5.4 tr|Q4AAE8|Q4AAE8_MYCHJ 50S ribosomal protein L29 OS=Mycoplasma...LIM domain-containing protein OS=Dictyost... 35 4.1 tr|Q8BEQ1|Q8BEQ1_9VIRU ORF2a

  13. AcEST: BP913308 [AcEST

    Lifescience Database Archive (English)

    Full Text Available E Sbjct: 502 GLNAALKDEFHPLPTSEDIFSRL-KGTVYSQIDLKDAYLQVELDEE 546 >sp|P15629|POL_SOCMV Enzymatic polyprotein OS=Soybean chlorotic mott...le virus GN=ORF V PE=3 SV=2 Length = 692 Score = 44.7 bi

  14. Virus-induced gene silencing in Medicago truncatula and Lathyrus odorata

    DEFF Research Database (Denmark)

    Grønlund, Mette; Kjær, Gabriela Didina Constantin; Piednoir, Elodie;

    2008-01-01

    Virus-induced gene silencing (VIGS) has become an important reverse genetics tool for functional genomics. VIGS vectors based on Pea early browning virus (PEBV, genus Tobravirus) and Bean pod mottle virus (genus Comovirus) are available for the legume species Pisum sativum and Glycine max...

  15. First Report of Cherry virus A in Sweet Cherry Trees in China

    Science.gov (United States)

    Plants in the genus Prunus of the family Rosaceae are important ornamental and fruit trees in China (1). In June 2007, sweet cherry (Prunus avium) trees with mottling and mosaic symptoms were observed in a private garden near Kunming, Yunnan Province. Twenty-four samples were then collected from swe...

  16. De geografische variabiliteit van Philudoria potatoria L. in Nederland (Lepidoptera, Lasiocampidae)

    NARCIS (Netherlands)

    Lempke, B.J.

    1949-01-01

    1. The caterpillars of Philudoria potatoria. L. belong in Holland to two phaenotypes, a light one with a pale bluish-grey ground colour, strongly mottled with pale markings (figured in SEPP 1), and a dark one, which is nearly blackish blue and much less provided with pale markings (figured in practi

  17. Bacterial response to contrasting sediment geochemistry in the central Indian Basin

    Digital Repository Service at National Institute of Oceanography (India)

    Das, A.; Fernandes, C.E.G.; Naik, S.S.; Nath, B.N.; Suresh, I.; Mascarenhas-Pereira, M.B.L.; Gupta, S.M.; Khadge, N.H.; PrakashBabu, C.; Borole, D.V.; Sujith, P.P.; Valsangkar, A.B.; Mourya, B.S.; Biche, S.U.; Sharma, R.; LokaBharathi, P.A.

    uptake and higher numbers of aerobic sulphur oxidizers at the mottled zones, characterize core TVBC 26. In the carbon-poor environment of core TVBC 08, a doubling of the sup(14)C uptake, a 250 times increase in the number of autotrophic nitrifiers, a four...

  18. A Guide to Bottomland Hardwood Restoration

    Science.gov (United States)

    2001-06-01

    pans or depressions Mean monthly temperature Mean growing season water table depth Degree of mottling Evapotranspiration potential Hydrologic system...matter and soil microbiota , both of which may of forest undergrowth, and native plant nurseries rarely hasten soil development, especially on...away (flats). Inactive merts, for subsequent inventory and management. older channels (sloughs) and depressions are the wettest Identifying subunits

  19. Multiplex RT-PCR detection of four aphid-borne strawberry viruses in Fragaria spp. in combination with a plant mRNA specific internal control

    NARCIS (Netherlands)

    Thompson, J.R.; Wetzel, S.; Klerks, M.M.; Vasková, D.; Schoen, C.D.; Spak, J.; Jelkmann, W.

    2003-01-01

    The principal aphid-borne viruses infecting Strawberry (Fragaria spp.) Strawberry crinkle virus (SCV), Strawberry mild yellow edge virus (SMYEV), Strawberry mottle virus (SMoV) and Strawberry vein banding virus (SVBV) can cause serious crop losses. In this paper, a multiplex reverse transcriptase po

  20. Remedial Investigation Report. Volume 7. Eastern Study Area, Section 1. 0, Version 3.2

    Science.gov (United States)

    1989-05-01

    Cation exchange capacities tend to be highest in the soils containing argillic or clay horizons. Typically, this is most notable below a depth of 12...for extended periods. They have properties related to a seasonally high water table. The Aquic Haplustolls lack an argillic horizon and may be mottled

  1. Remedial Investigation Report. Volume 11. North Central Study Area, Section 1.0 Text. Version 3.3

    Science.gov (United States)

    1989-07-01

    infiltration potential of contaminants. Cation exchange capacities tend tc be highest in the soils containing argillic , or clay, horizons. Typically, this...contain clayey soils with high cation0• exchange capacities. The Aquic Haplustolls lack an argillic horizon and may be mottled below a depth of 12 inches

  2. 7 CFR 29.3076 - Variegated (K).

    Science.gov (United States)

    2010-01-01

    ... 7 Agriculture 2 2010-01-01 2010-01-01 false Variegated (K). 29.3076 Section 29.3076 Agriculture Regulations of the Department of Agriculture AGRICULTURAL MARKETING SERVICE (Standards, Inspections, Marketing... Variegated (K). Any leaf of which 20 percent or more of its surface is yellow, grayish, mottled, or...

  3. Complex Assembly Behavior During the Encapsulation of Green Fluorescent Protein Analogs in Virus Derived Protein Capsules

    NARCIS (Netherlands)

    Minten, Inge J.; Nolte, Roeland J.M.; Cornelissen, Jeroen J.L.M.

    2010-01-01

    Enzymes encapsulated in nanocontainers are a better model of the conditions inside a living cell than free enzymes in solution. In a first step toward the encapsulation of multiple enzymes inside the cowpea chlorotic mottle virus (CCMV) capsid, enhanced green fluorescent protein (EGFP) was attached

  4. Natural Spread of Plant Viruses by Birds

    NARCIS (Netherlands)

    Peters, D.; Engels, C.; Sarra, S.

    2012-01-01

    Observations made in Mali strongly suggest that Rice yellow mottle virus (RYMV) is spread by weaverbirds (Quelea quelea) below and around baobab trees (Adansonia digitata) in which they nest. Rice leaves in bird nests appeared to be infected. In Spain, an infection of Southern bean mosaic virus (SBM

  5. Simultaneous multiplex PCR detection of seven cucurbit-infecting viruses.

    Science.gov (United States)

    Kwon, Ji Yeon; Hong, Jin Sung; Kim, Min Jea; Choi, Sun Hee; Min, Byeong Eun; Song, Eun Gyeong; Kim, Hyun Hee; Ryu, Ki Hyun

    2014-09-01

    Two multiplex polymerase chain reaction (PCR) systems using dual priming oligonucleotide (DPO) primers were developed for the simultaneous detection of seven cucurbit-infecting viruses. One system allows for the detection of papaya ringspot virus, watermelon mosaic virus, and zucchini yellow mosaic virus, whereas the other permits the detection of cucumber green mottle mosaic virus, cucumber fruit mottle mosaic virus, kyuri green mottle mosaic virus, and zucchini green mottle mosaic virus. Viral species-specific DPO primers developed in this study detected as little as 10 fg/μl of viral RNA under monoplex conditions and 10 pg/μl of viral RNA under multiplex conditions. Multiplex PCR using the DPO primer sets was capable of amplifying viral genes at annealing temperatures ranging from 53 °C to 63 °C. Whereas the use of conventional primers gave rise to non-specific bands, the DPO primers detected target viral genes in the absence of non-specific amplification. When these DPO multiplex primer sets were applied to virus-infected cucurbit samples obtained in the field, multiple infection as well as single infection was accurately identified. This novel approach could also detect multiple viruses in infected seeds. The reliability of multiplex PCR systems using DPO primers for plant virus detection is discussed.

  6. AcEST: DK959928 [AcEST

    Lifescience Database Archive (English)

    Full Text Available 8DK04|IF2_THEEB Translation initiation factor IF-2 OS=Thermo... 31 6.7 sp|P07993|POLG_PEMV Genome polyprotein (Fragment) OS=Pepper...3|POLG_PEMV Genome polyprotein (Fragment) OS=Pepper mottle virus PE=3 SV=2 Length

  7. Evaluation of Organic Pest Management Treatments for Bean Leaf Beetle in Soybean in Iowa

    Science.gov (United States)

    Many organic soybean producers face the challenge of bean leaf beetle (Ceratoma trifurcata), which harbors bean mottle pod virus and opens infection sites for Fusarium spp., Cercospora kikuchii, and Phomopsis spp., which cause discoloration in soybeans. Stained soybean seed is less acceptable for fo...

  8. A case of dyschromatosis universalis hereditaria with adermatoglyphia: A rare association

    Directory of Open Access Journals (Sweden)

    Sumir Kumar

    2015-01-01

    Full Text Available Dyschromatosis universalis hereditaria (DUH is a rare, autosomal dominant genodermatosis with a peculiar reticulate pigmentary change, consisting of hyperpigmented macules mingled with hypopigmented lesions to give an overall impression of mottling. We herein report a case of DUH with adermatoglyphia in a young male with family history of the disorder.

  9. Tappet Chill Depth Measuring by Magnetic Permeability and Inductance Displacement Meter

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    It is possible to measure different position along the axle direction of tappet. According to the maximum output of signal, the boundary of white iron structure and mottled iron structure can be deduced, and at the same time, it is possible to use inductance displacement meter to show the chill depth which is the distance from the boundary to the end.

  10. Dicty_cDB: SFD596 [Dicty_cDB

    Lifescience Database Archive (English)

    Full Text Available d:none) Dictyostelium discoideum LTR-retro... 352 3e-96 AY523538_1( AY523538 |pid:none) Sweet potato feathery...2_1( AY523552 |pid:none) Sweet potato feathery mottle virus... 36 0.72 ( Q10267 ) RecName: Full=Uncharacteri

  11. First report of Potato virus V and Peru tomato mosaic virus on tamarillo (Solanum betaceum) orchards of Ecuador

    Science.gov (United States)

    In Ecuador, tamarillo (Solanum betaceum) represents an important cash crop for hundreds of small farmers. In 2013, leaves from tamarillo plants showing severe virus-like symptoms (mosaic, mottling and leaf deformation) were collected from old orchards in Pichincha and Tungurahua. Double-stranded RN...

  12. STUDIES OF BASIC CHEMICAL COMPOSITION OF SEED COAT MOTILING OF SOYBEAN%大豆种粒斑驳的基本化学组成

    Institute of Scientific and Technical Information of China (English)

    滕冰; 吴宗璞; 高凤兰; 徐金星

    2000-01-01

    After soybean was infected by SMV, the seed coat that became seed coat mot-tling was analyzedwith TLC technique, U1 traviolet spectrum and many chemical qualitativeanalysis methods. The analysis result showed that seed coat mottling and normal seed coatcontained anthocyanidin, flavone, flavonol, dihydroflavone, dihydroflavonol and their glu-cosid, and flavonol, polymerflavonol. The seed coat mottling was different from normalseed coat on content and composition of flavonoids. The accumlation of flavonoids was relat-ed to soybean was infected by SMV. According to colour of seed coat mottling and relativeflavonoids, two types of mottling can be distingaished by with and without anthocyanidin.%本研究用TLC技术结合紫外吸收光谱分析以及其它化学定性方法,分析大豆因感染SMV产生的种粒斑驳的化学组成:有种粒斑驳的种皮和大豆健株种皮含有花色素、黄酮、黄酮醇、二氢黄酮、二氢黄酮醇和它们的苷,也含有黄烷醇以及黄烷醇多聚物。种粒斑驳中的黄酮类化合物在含量和组成上都可显著地区别于健株种皮,其积累与感染SMV相关。按种粒斑驳的颜色和相关的黄酮类化合物分类,斑驳可以分为有或无花色素苷两个类型。

  13. 鄱阳湖滨沙岭地区网纹层的顶界年代%Top Boundary Age of the Vermiculated Beds in the Shaling Area of the Poyang Lake

    Institute of Scientific and Technical Information of China (English)

    韩志勇; 李徐生; 陈英勇; 弋双文; 鹿化煜; 杨达源

    2012-01-01

    Sand hills distributed along shores of the Poyang Lake are composed of alternate eolian sand layers and silt layers. The Shaling sand hill, about 2 km in width and 5 km in length, is located in Liaohua Town of Xingzi County. On its north and west margins, three sections (SS1, SS2 and SS3) were investigated. Vermicu- lated mottles in this hill can be divided into three types. Vermiculated mottles of type I are thick and dense and only occur in the lower part (layer 1) of section SS1. Vermiculated mottles of type II are relatively thin and sparsely scattered and occur in the beds (layer 2) above type I. Vermiculated mottles of type III are indis- tinctly shaped and occur in the upper part (layer 5) of the section SSland the upper part (layer 2) of the section SS2. A sand bed (layer 4) separates the vermiculated mottles of type Ill from that of type I and type II in sec- tion SS1. Vermiculated mottles of type III cover a sand bed (layer 1) in section SS2. The section SS3 only com- prises one sand bed (layer 1) and develops no vermiculated mottle. Vermiculated mottles of types I and type II are mature vermiculated mottles, whereas type III are immature. OSL samples were collected from each sand bed. 125-250 pan quartz grains were separated from sand samples following the sequences of'the standard pre- treatment. The equivalent dose was measured using the Single Aliquot Regeneration protocol in the Laboratory of Surface Process of Nanjing University. The annual dose was determined by contents of U, Th and K mea- sured using the neutron activation method in China Institute of Atomic Energy. In OSL dating of sand samples, no evidence indicates that the samples show OSL saturation signals and the annual dose of the samples was af- fected by weathering. So, the OSL ages can be interpreted as the deposition ages. The sand layers of Section SS1 and SS2 were deposited about 80 ka and 71 ka ago respectively and the sand layer of Section SS3 has

  14. CARDOON, RENEWABLE SOURCE OF ENERGY

    Directory of Open Access Journals (Sweden)

    Cecilia NEAGU

    2013-01-01

    Full Text Available Cardoon (Cynara cardunculus is a herbaceous perennial plant in the vegetable, artichoke, wild or garden, which belongs to the Compositae family (Asteraceae Compositae-and more precisely Cynara species and is grown specifically for the production of biomass (solid bio fuel as a pellet, or solid and liquid bio fuel, bio diesel. In this paper I have tried to highlight the profitability and economic efficiency of growing of this plant. Production capacity exceeding 2 tonnes dry matter/1000mp. The yield depends on climatic conditions, adequate soil moisture, soil nutrients, and range from 1 to 3 t/1000mp, dry. Cardoon seed contains on average 24% oil (category: 19-32%, with the same qualities as the sunflower. Quantity of seed production to 480 kgs/1000mp, while ordinary productivities range 70 to 330 kg/1000mp, always depending on the total biomass production. Growing cardooncan replace traditional crops, partly by ensuring a good profit for the farmer (double the wheat and rapeseed and bio fuel production with high energy content. Solid bio fuels (pellets, briquettes, artichokes, etc. can reach the enduser, at prices up to 30-40% lower than the price of oil. Because cardoon is a perennial plant which grows once every 10-12 years, and preparing the ground and sowing it will be carried out at intervals so large (this plant is harvested annually,it is remarkable cost reduction efficiency of growing this plant.In addition to the obvious environmental advantages by producing green energy, growing artichokes garden preserves the soil covered for the most part of the year, thereby minimizing the risk of soil erosion and limit the pollution of soil and groundwater with agrochemical products, especially in areas with intensive agriculture, because it does not require additional fertilization and/or with the use of chemical fertilizers or pesticides.

  15. Dicty_cDB: Contig-U01150-1 [Dicty_cDB

    Lifescience Database Archive (English)

    Full Text Available 2 ( AC178535 ) Strongylocentrotus purpuratus clone R3-3031B09, W... 36 0.23 2 ( DY821463 ) CTOY13315.b1_E18.ab1 CTO(XYZ) dandelion...0.10 1 ( EL451273 ) CHTM4167.b2_N10.ab1 CHT(LMS) Jerusalem artichoke ... 50 0.10 1 ( DY811564 ) CTOX20270.b1_L04.ab1 CTO(XYZ) dandeli...on Taraxacum... 50 0.10 1 ( DW168634 ) CLVY6976.b1_O15.ab1 CLV(XYZ) lettuce virosa

  16. Dicty_cDB: Contig-U16465-1 [Dicty_cDB

    Lifescience Database Archive (English)

    Full Text Available ( FG288615 ) 1108793273066 New World Screwworm Egg 9261 ESTs C... 70 3e-22 4 ( FG...291868 ) 1108800219977 New World Screwworm Egg 9261 ESTs C... 70 3e-22 4 ( AK248126 ) Dugesia japonica mRNA ... artichoke H... 98 1e-20 3 ( FG282965 ) 1108383361014 New World Screwworm Egg 9261 ESTs C... 70 2e-20 4 ( DY...BCA) Royal Gala fruit stored... 78 2e-18 2 ( FG286014 ) 1108770710800 New World S...crewworm Egg 9261 ESTs C... 70 3e-18 3 ( FG291726 ) 1108793360180 New World Screwworm Egg 9261 ESTs C... 70

  17. 褐变抑制剂对菊芋切片防褐变效果的研究%Anti-brow ning Effects of Brow ning Inhibitors on Jerusalem A rtichoke Slices

    Institute of Scientific and Technical Information of China (English)

    王蕊

    2013-01-01

    为了提高菊芋加工产品质量,采用单因素和正交试验对菊芋切片褐变抑制剂进行褐变抑制效果研究。结果表明,柠檬酸、抗坏血酸、EDTA 2Na、CaCl2、NaCl、植酸、醋酸、乳酸、乙醇及泡菜腌制液对菊芋切片褐变均有一定的抑制作用,其中柠檬酸、抗坏血酸、EDTA 2Na、CaCl2、植酸抑制效果较好;复合抑制剂4 g/L柠檬酸+1.5 g/L 抗坏血酸+4 g/L CaCl2+3 g/L EDTA 2Na +0.7%植酸对菊芋切片褐变抑制效果最佳,其总色差(DE)值(4)比未经褐变抑制剂处理的菊芋切片DE值(42)降低了90.48%。%In order to improve the quality of Jerusalem artichoke products ,brow ning inhibitors of Jerusalem artichoke slices were studied by the single factor and orthogonal experiments .The re-sults showed that citric acid ,ascorbic acid ,EDTA-2Na ,calcium chloride ,sodium chloride ,phytic acid ,acetic acid ,lactic acid ,ethanol and pickle juice had some inhibitory effects on brow ning of Je-rusalem artichoke slices ,especially the inhibitory effects of citric acid ,ascorbic acid ,EDTA-2Na , calcium chloride ,phytic acid were better ;the optimum composite browning inhibitor was 4 g/L citric acid +1 .5 g/L ascorbic acid +4 g/L calcium chloride +3 g/L EDTA-2Na +0.7% phytic acid ,the treatment with which significantly inhibited the browning of Jerusalem artichoke slices , maintained lower DE value(4)compared to the control(42)without browning inhibitor .

  18. Effects of nitrogen and carbon sources on the production of inulinase from strain Bacillus sp. SG113

    Science.gov (United States)

    Gavrailov, Simeon; Ivanova, Viara

    2016-03-01

    The effects of the carbon and nitrogen substrates on the growth of Bacillus sp. SG113 strain were studied. The use of organic nitrogen sources (peptone, beef extract, yeast extract, casein) leads to rapid cellular growth and the best results for the Bacillus strain were obtained with casein hydrolysate. From the inorganic nitrogen sources studied, the (NH4) 2SO4 proved to be the best nitrogen source. Casein hydrolysate and (NH4) 2SO4 stimulated the invertase synthesis. In the presence of Jerusalem artichoke, onion and garlic extracts as carbon sources the strain synthesized from 6 to 10 times more inulinase.

  19. Serological Strains of Tobacco Ringspot Virus Transmitted by Xiphinema americanum.

    Science.gov (United States)

    Rush, M C

    1970-07-01

    Five serological strains of tobacco ringspot virus isolated from naturally infected tobacco in North Carolina, and a strain isolated from watermelon in the Rio Grande Valley of Texas were transmitted from cucumber to cucumber by mass-screened and handpicked Xiphinerna americanum from North Carolina. The Eucharis mottle strain from Peru was not transmitted, indicating that a specific strain-vector relationship may exist between the geographically isolated strains from North and South America.

  20. Fluoride Importance in Controlling Caries and Fluorosis

    OpenAIRE

    Gaurav Solanki

    2012-01-01

    The use of fluorides for oral health has always involved a balance between the protective benefit against dental caries and the risk of developing fluorosis. The link between fluoride and dental health was established to determining the causes of dental fluorosis or enamel mottling. Fluorosis in Indian children was highly prevalent in the early 1990s. Policy were introduced to control fluoride exposure and to reduce the prevalence of fluorosis. The study aimed of describing the prevalence, se...

  1. Experimentally transmitted marble spleen disease in pen-raised wild turkeys.

    Science.gov (United States)

    Iltis, J P; Jakowski, R M; Wyand, D S

    1975-10-01

    Pen-raised North American wild turkeys (Meleagris gallopavo L.) were experimentally infected with marble spleen disease (MSD) to determine their susceptibility to this disease. Gross and microscopic lesions were consistent with experimental MSD in pheasants and domestic turkeys: an enlarged mottled spleen, intranuclear inclusion bodies, and absence of pulmonary edema and hemorrhage. Detectable levels of viral antigen were not demonstrable in sera of turkeys using the agar gell precipitin test.

  2. AcEST: DK952049 [AcEST

    Lifescience Database Archive (English)

    Full Text Available 34 3.2 tr|Q6FWC0|Q6FWC0_CANGA Strain CBS138 chromosome D complete seque... 34 3.2 tr|Q3BD96|Q3BD96_9VIRU Polyprotein OS=Plantago mott...le virus PE=4... 34 4.1 tr|Q7YTR7|Q7YTR7_CAEEL Putative

  3. Imerslund-Grasbeck syndrome in a Chinese family with distinct skin lesions refractory to vitamin B12.

    OpenAIRE

    Lin, S. H.; Sourial, N A; Lu, K. C.; Hsueh, E J

    1994-01-01

    Two brothers in a Chinese family with selective malabsorption of vitamin B12 associated with proteinuria (Imerslund-Grasbeck syndrome) presented with widespread mottled skin pigmentation, termed poikiloderma. In contrast to anaemia, this pigmentary disturbance remained unresponsive to vitamin B12 replacement. This is different from the reported hyperpigmentation sometimes seen in vitamin B12 deficiency which is reversible following treatment. As far as is known, an irreversible and persistent...

  4. Waardenburg's syndrome: case reports in two Nigerians.

    Science.gov (United States)

    Amoni, S S; Abdurrahman, M B

    1979-01-01

    We saw two cases of Waardenburg's syndrome in Nigerian children. A 9-year-old girl had congenital deaf-mutism, high-arched palate, complete heterochromia iridis with pigment mottling in the posterior pole of the eye with the hypochromic iris, dyspigmented frontal scalp hair, a history of vitiligo, but with no dystopia canthorum. An 11-year-old boy had a harelip with cleft palate, heterochromia iridis, blonde fundus on the eye with blue iris, and dystopia canthorum.

  5. A virus-induced gene silencing method to study soybean cyst nematode parasitism in Glycine max

    OpenAIRE

    Kandoth, Pramod K; Heinz, Robert; Yeckel, Greg; Gross, Nathan W; Juvale, Parijat S; Hill, John; Whitham, Steven A.; Baum, Thomas J.; Mitchum, Melissa G.

    2013-01-01

    Background Bean pod mottle virus (BPMV) based virus-induced gene silencing (VIGS) vectors have been developed and used in soybean for the functional analysis of genes involved in disease resistance to foliar pathogens. However, BPMV-VIGS protocols for studying genes involved in disease resistance or symbiotic associations with root microbes have not been developed. Findings Here we describe a BPMV-VIGS protocol suitable for reverse genetic studies in soybean roots. We use this method for anal...

  6. A High Throughput Soybean Gene Identification System Developed using Soybean Yellow Common Mosaic Virus (SYCMV)

    OpenAIRE

    Seo, Eun–Young; Cho, Seunghee; Moon, Jae Sun; Gotoh, Takafumi; Goto, Takafumi; Kim, Hong Gi; Domier, Leslie L; Lim, Seungmo; Kim, Kil Hyun; Moon, Jung–Kyung; Hammond, John; Lim, Hyoun–Sub; Song, Ki Hak

    2015-01-01

    Soybean yellow common mosaic virus (SYCMV) was recently reported from Korea, and a subsequent survey of soybean fields found that SYCMV, Soybean yellow mottle mosaic virus (SYMMV), and Soybean mosaic virus (SMV) infections were widespread. SYCMV has recently been developed into a Virus Inducing Gene Silencing (VIGS) vector for use as a reverse genetics tool for soybean, and here we report a modified SYCMV VIGS vector containing a new restriction enzyme site in the 3’ non–coding region into wh...

  7. 利用多重RT-PCR技术检测草莓病毒的研究%Detection of strawberry viruses by multiplex RT-PCR

    Institute of Scientific and Technical Information of China (English)

    杨洪一; 张志宏; 李丽丽; 赵敏

    2007-01-01

    @@ 目前已报道侵染草莓的病毒有20多种,其中草莓斑驳病毒(Strawberry mottle virus,SMoV)、草莓轻型黄边病毒(Strawberry mild yellow edge virus,SMYEV)和草莓镶脉病毒(Strawberry vein banding virus,SVBV)是分布较广、危害较重的3种主要病毒.

  8. Biomonitoring of Environmental Status and Trends (BEST) Program: Environmental Contaminants and their Effects on Fish in the Mississippi River Basin

    Science.gov (United States)

    2002-06-01

    wheat, soybean, cattle , and hog production (Goolsby, 1996). Many programs and studies (for example, Thurman and others, 1991; Goolsby and others, 1993... urolithiasis . Samples of kidney, spleen, liver, gonad, and gill were collected for hsitopathological examina- tion from all specimens (Table 1-3). In...Normal; firm, dark, flat 0 Swollen; enlarged or distended 30 Mottled; gray discoloration 30 Granular in appearance and texture 30 Urolithiasis

  9. AcEST: DK949395 [AcEST

    Lifescience Database Archive (English)

    Full Text Available =Phaeosphaeria sp. ... 32 4.4 sp|Q06660|BC1_TMOV Movement protein BC1 OS=Tomato mottle virus (... 31 7.5 sp|P21936|BC1_SLCV Movement...bjct: 819 NELYLVQAAARHMTTMCRMCNDIGSVDRDFIEANINSVHFPEFSTLSLVADKKKALAR 876 >sp|Q06660|BC1_TMOV Movement...-EIILQFPSTASQLTARLSRS 49 >sp|P21936|BC1_SLCV Movement protein BC1 OS=Squash leaf curl virus GN=BC1 PE=1 SV=1

  10. Evaluation of Potential for Monitored Natural Attenuation of Perchlorate in Groundwater (Indian Head)

    Science.gov (United States)

    2010-07-01

    material. There are a wide variety of microorganisms can degrade perchlorate to chloride and oxygen under oxygen limiting conditions (Coates et al., 1999...anaerobic respiration when oxygen is not present. This metabolic versatility suggests that 2 perchlorate reducing microorganisms will be active...consisted of mottled light to olive brown clay to sandy silts. The clay and sand fractions of the silts varied horizontally and vertically. Fine

  11. Itʼs not what you Perceive itʼs the way that you Perceive it: Reflections on the Relationship Between Perceptual Appearance and Perceptual Aesthetics

    OpenAIRE

    2012-01-01

    For some time we have been interested in the measurement of visual appearance in medical applications. My previous presentations at CIE Expert Symposia have focused on the measurement and characterisation of dental fluorosis (i.e. white mottling on the teeth caused by the ingestion of too much fluoride in childhood) and post-surgical facial scarring ([1], [2]). In this presentation, however, I wish to broaden the focus to include other work from my labora...

  12. Biology of Herbivorous Fish in the Coastal Areas of Western Japan

    OpenAIRE

    Yamaguchi, Atsuko; Furumitsu, Keisuke; Yagishita, Naoki; KUME, Gen

    2010-01-01

    Seaweed beds in Japanese coastal waters have significantly declined in recent years and feeding by herbivorous fish has been identified as one of the potential causes of this decline. In the western coastal areas of Kyushu, seaweed consumption by fish species such as the mottled spinefoot (Siganus fuscescens), sea chubs (Kyphosus spp.), and the Japanese parrotfish (Calotomus japonicus) has become a matter of concern. Our research group has been investigating the biology of herbivorous fish in...

  13. JPRS Report China

    Science.gov (United States)

    2007-11-02

    caused by peanut mild mottle virus (PMMV) was predominant throughout all areas. Peanut yellow mosaic and common mosaic caused by cucumber mosaic virus ...Fujian 42 Types and Distribution of Peanut Virus Diseases in China and Detection of the Viruses by Serology 42 TAIWAN Yao Chia-wen on Taiwan’s Legal...Distribution of Peanut Virus Diseases in China and Detection of the Viruses by Serology 40110003 Wuhan ZHONGGUO YOULIAO [OIL CROPS OF CHINA] in

  14. Cephalopod dynamic camouflage: bridging the continuum between background matching and disruptive coloration

    OpenAIRE

    Hanlon, R.T.; Chiao, C.-C.; Mäthger, L.M.; Barbosa, A.; Buresch, K.C.; Chubb, C

    2008-01-01

    Individual cuttlefish, octopus and squid have the versatile capability to use body patterns for background matching and disruptive coloration. We define—qualitatively and quantitatively—the chief characteristics of the three major body pattern types used for camouflage by cephalopods: uniform and mottle patterns for background matching, and disruptive patterns that primarily enhance disruptiveness but aid background matching as well. There is great variation within each of the three body patt...

  15. East Europe Report, Economic and Industrial Affairs, No. 2410.

    Science.gov (United States)

    2007-11-02

    has great hope for the Polon variety. Its char- acteristics are: good yield, good resistance to powdery mildew and mottle disease, and what is also...high culture. Spring wheat of the Jara variety was developed at CSRS. Its features are: a very high grain production, low sensitivity to powdery ... mildew and rust, it can be harvested sooner than any presently grown varieties of Spring wheats in our country. It is adaptable for cultivation in wheat

  16. New River Dam Foundation Report. Gila River Basin: Phoenix, Arizona and Vicinity (Including New River).

    Science.gov (United States)

    1985-10-01

    further downstream before merging with the Agua Fria River. 6 Site Geology 2.08 The geological formations present within the project area consist...and appear to be of plutonic origin. The granite is characterized by its medium- to coarse- grained texture, small percentage of mafic minerals and...mottled appearance due to a high percentage of mafic minerals , and medium to whitish-gray color. Scattered occurrences of a fine- to medium-grained

  17. 昆明地区香石竹病毒病及综合防治研究%Studies on Carnation Virus Disease and Integrated Management in Kunming

    Institute of Scientific and Technical Information of China (English)

    蔡红; 孔宝华; 刘进元; 陈海如

    2001-01-01

    简要综述了昆明地区香石竹病毒病的研究进展。经鉴定,确认昆明地区香石竹上存在的病毒有:香石竹斑驳病毒(CarMV)、香石竹脉斑驳病毒(CarVMV)、香石竹潜隐病毒(CarLV)、香石竹蚀环病毒(CarERV)、香石竹坏死斑点病毒(CarNFV)。其中,CarMV是昆明地区香石竹上的优势病毒。同时,本文还提出了香石竹病毒病的综合防治策略,以供生产上运用。%This paper briefly summarized the research progress of carnation virus disease in Kunming. By identified procedure, we affirmed there are carnation mottle virus,carnation vein mottle virus,carnation latent virus,carnation etched ring virus and carnation necrotic fleck virus in Kunming area. Among these viruses, carnation mottle virus is the superior virus. Meanwhile, this paper also put forward the strategy of carnation virus disease's integrated management in order to supply in the producing.

  18. Surficial phase-identification and structural profiles from weathered natural pyrites: A grazing-incidence X-ray diffraction study

    Energy Technology Data Exchange (ETDEWEB)

    Cai Yuanfeng [State Key Laboratory of Mineral Deposits Research, Nanjing 210093 (China); Department of Earth Sciences, Nanjing University, Nanjing 210093 (China)], E-mail: caiyf@nju.edu.cn; Pan, Yuguan [State Key Laboratory of Mineral Deposits Research, Nanjing 210093 (China); Xue Jiyue; Su Guizhen [Department of Earth Sciences, Nanjing University, Nanjing 210093 (China)

    2009-01-15

    Five pyrites with original crystal face (1 0 0) with different tarnish colours were selected from one pyrite-bearing ore sample from Tongling multi-metal deposit, Anhui, China. They are henna mottled with dark violet, yellow mottled with red, yellow, blue mottled with violet and reddish brown in surface colour. Grazing-incidence X-ray diffractometry (GIXRD) was used to study the phases formed or precipitated on the surface of pyrite (1 0 0) face during chemical weathering. By changing the incident angle, GIXRD can provide information on the changes in the mineral phases from the surface as a function of depth. Products formed or precipitated on the surface of pyrite (1 0 0) face are one or several sulfur or iron-bearing hydrated oxides and include gypsum, jalpaite, goethite, goldichite. The sulfur-bearing minerals present on the surface imply the oxidation of sulfur to sulfate, or the reduction of sulfur to sulfide. By analyzing a series of GIXRD patterns obtained at different angles of incidence for a single pyrite, the mineral assemblage differs from the surface into the body of the crystal. Taking the reddish brown sample as an example, four diffraction profiles at 2.575, 2.2105, 1.9118 and 1.613 A are present in the pattern of a 2{sup o} incident angle experiment whereas they cannot be found at a GIXRD angle smaller than 0.6{sup o}.

  19. Influence of Gloss and Surface Roughness of Coated Ink Jet Papers on Print Uniformity

    Directory of Open Access Journals (Sweden)

    Ivana Jurič

    2013-12-01

    Full Text Available The final print quality depends on the quality of the digital image as well as the properties of the printing system, the inks and the paper used. One of the most widely used digital printing technologies is ink jet, where ink is ejected directly onto a substrate from a jet device driven by an electronic signal. Most ink jet inks have low viscosity and low surface tension, which pose high demands upon the surface properties of the paper. The aim of this study was to investigate the influence of paper properties of commercially available papers suitable for ink jet printing on print mottle, non-uniformity. We used two high glossy, one glossy, one semi-glossy and two matte papers. For the assessment of the surface properties, we measured surface roughness with the portable Roughness Tester TR 200. We also measured surface gloss with QIP Glossmaster. To characterise the print mottle we used the image analysis method – Gray level co-occurrence matrix (GLCM. Print mottle was estimated according to five GLCM parameters: Contrast, Correlation, Entropy, Energy and Homogeneity. Results obtained in this paper showed that the surface properties of paper are not in any direct relation with print uniformity.

  20. Transmissibilidade do virus do mosaico comum da soja (VMCS por intermédio das sementes de soja(Glycine max (L. Merrill Transmission of soybean mosaic virus (SMV by soybean seeds (Glycine max (L. Merrill

    Directory of Open Access Journals (Sweden)

    A.S.do R. Barros

    1992-01-01

    Full Text Available Diante da dispersão do vírus VMCS nas lavouras brasileiras de soja, o presente trabalho foi conduzido procurando verificar a transmissibilidade do patógeno pelas sementes portadoras do sintoma ("mancha café" característico da doença. Para tanto, material proveniente de campos contaminados foi testado quanto às porcentagens de emergência e infecção das plântulas. Os resultados obtidos permitiram concluir que o patógeno é transmitido por sementes, ainda que estas estejam livres de sintomas; contudo, apesar da inexistência de efeitos sobre a emergência, a elevação da freqüência de sementes com "mancha café" tende a ampliar o número de plântulas contaminadas.In view of the long-range dissemination of the virus SMV in Brazilian soybean fields, this research was conserned with the transmission of the pathogen by seeds that show seedcoat mottling. Seeds proceeding from contaminated fields were submitted to emergence tests and examination of infected seedlings. The results indicated that the pathogen is transmited through the seeds even when they do not show seedcoat mottling; although no particular effect was found on emergence percentage, the use of mottled seeds tends to increase the number of infected seelings.

  1. Optimization of Decoloration Technology of Inulin Oligosaccharide%菊芋菊糖脱色工艺的优化

    Institute of Scientific and Technical Information of China (English)

    张超; 栾兴社; 钟传青; 王书燕

    2013-01-01

    The decoloration effects of five kinds of resin on inulin (Jerusalem artichoke) oligosaccharides were investigated;and the decoloration technology was optimized by single factor test and orthogonal experiment.The results showed that adsorption effect of D3520 resin was the best.The optimum decoloration parameters were temperature 40 ℃ and pH 6.The decoloration rate was 80.51%,while the polysaccharides retention rate was 70.49%.The adsorption of pigment in inulin oligosaccharides was accord with single molecule adsorption and Langmuir isotherms equation,the adsorption dynamics was accord with diffusion equation.%研究了5种树脂对菊芋(Jerusalem artichoke)菊糖溶液中色素脱除效果,通过单因素试验和正交试验对其脱色条件进行优化.结果表明,采用树脂D3520,在pH 6、40℃下,菊芋菊糖溶液的脱色率可达到80.51%,菊糖保留率为70.49%,树脂对菊芋菊糖中色素的吸附为单分子吸附,符合Langmuir吸附等温式,其吸附动力学符合扩散方程.

  2. Effect of inulin extracts or inulin-containing plant supplement on blood lipid indices and fatty acid profile in fattener tissues.

    Science.gov (United States)

    Grela, E R; Sobolewska, S; Roziński, T

    2014-01-01

    The objective of the study was to evaluate the effect of inulin or dandelion, chicory and Jerusalem artichoke powder on lipid indices and fatty acid profile in fattener tissues. The experiment involved 120 crossbred pigs (PL x PLW) x Duroc with an initial body weight of 25.0 +/- 0.5 kg. Animals were assigned into 6 groups. A diet for group I (control) did not comprise an inulin additive, group II and III received 2% inulin (water or water-alcohol extraction of inulin from chicory root, respectively), while the mixtures for group IV, V and VI contained 4% root powder from Jerusalem artichoke (topinambur), chicory or dandelion, respectively. The animals were slaughtered at 115 kg body weight. The samples of blood, liver and the muscle longissimus dorsi tissues as well as whole hearts were collected for analysis. Fatty acid profile, some lipid indices and crude fat and cholesterol content were evaluated. Dietary supplement of 40 g dandelion powder resulted in preferable significant changes in the blood lipid indices and fatty acids composition (increased PUFA share and decreased n-6/n-3 ratio).

  3. Effect of Dietary Inulin Source on Piglet Performance, Immunoglobulin Concentration, and Plasma Lipid Profile

    Directory of Open Access Journals (Sweden)

    Grela Eugeniusz R.

    2014-10-01

    Full Text Available The aim of the study was to evaluate the effect of an inulin source (aqueous or aqueous-alcoholic extract, dried chicory root, or dried Jerusalem artichoke tubers on piglet performance, plasma lipid profile, and immunoglobulin concentration. The study was conducted on 534 piglets (44 litters allocated to five nutritional groups: group I (control - fed basal diet, groups II and III receiving basal diet supplemented with 2% of inulin (aqueous and aqueous-alcoholic extract respectively, and groups IV and V -4% additive of dried artichoke or dried chicory respectively. During the trial, piglets’ body weight, feed intake, diarrhoea incidence, and mortality were controlled. Blood samples were collected twice from six animals of each group. In blood plasma, indices of lipid profile and concentrations of IgA, IgG and IgM were measured. The addition of inulin, regardless of its form (extracts or dried plants, significantly improved the rearing indices. In piglets of groups III, IV and V a significant improvement of daily weight gains and feed efficiency was noted. Inulin showed hypolipidemic activity (lowered total cholesterol level and stimulated piglet immune system manifested by elevated IgA and IgG concentrations. Irrespective of the inulin source, a lower mortality rate resulting from the improvement of animal health was noted in all experimental groups.

  4. Ecological effects of crude oil residues on the functional diversity of soil microorganisms in three weed rhizospheres

    Institute of Scientific and Technical Information of China (English)

    ZHANG Qian-ru; ZHOU Qi-xing; REN Li-ping; ZHU Yong-guan; SUN Shu-lan

    2006-01-01

    Ecological effects of crude oil residues on weed rhizospheres are still vague. The quantitative and diversity changes and metabolic responses of soil-bacterial communities in common dandelion (Taraxacum officinale), jemsalem artichoke (Silphium perfoliatum L.) and evening primrose (A calypha australis L.) rhizospheric soils were thus examined using the method of carbon source utilization. The results indicated that there were various toxic effects of crude oil residues on the growth and reproduction of soil bacteria, but the weed rhizospheres could mitigate the toxic effects. Total heterotrophic counting colony-forming units (CFUs) in the rhizospheric soils were significantly higher than those in the non-rhizospheric soils. The culturable soil-bacterial CFUs in the jerusalem artichoke (S. perfoltatum) rhizosphere polluted with 0.50 kg/pot of crude oil residues were almost twice as much as those with 0.25 kg/pot and without the addition of crude oil residues. The addition of crude oil residues increased the difference in substrate evenness, substrate richness, and substrate diversity between non-rhizospheric and rhizospheric soils of T. officinale and A. australis,but there was no significant (p>0.05) difference in the Shannon's diversity index between non-rhizospheric and rhizospheric soils of S.perfoliatum. The rhizospheric response of weed species to crude oil residues suggested that S. perfoliatum may be a potential weed species for the effective plant-microorganism bioremediation of contaminated soils by crude oil residues.

  5. Ecological effects of crude oil residues on the functional diversity of soil microorganisms in three weed rhizospheres.

    Science.gov (United States)

    Zhang, Qian-ru; Zhou, Qi-xing; Ren, Li-ping; Zhu, Yong-guan; Sun, Shu-lan

    2006-01-01

    Ecological effects of crude oil residues on weed rhizospheres are still vague. The quantitative and diversity changes and metabolic responses of soil-bacterial communities in common dandelion (Taraxacum officinale), jerusalem artichoke (Silphium perfoliatum L.) and evening primrose (Acalypha australis L.) rhizospheric soils were thus examined using the method of carbon source utilization. The results indicated that there were various toxic effects of crude oil residues on the growth and reproduction of soil bacteria, but the weed rhizospheres could mitigate the toxic effects. Total heterotrophic counting colony-forming units (CFUs) in the rhizospheric soils were significantly higher than those in the non-rhizospheric soils. The culturable soil-bacterial CFUs in the jerusalem artichoke (S. perfoliatum) rhizosphere polluted with 0.50 kg/pot of crude oil residues were almost twice as much as those with 0.25 kg/pot and without the addition of crude oil residues. The addition of crude oil residues increased the difference in substrate evenness, substrate richness, and substrate diversity between non-rhizospheric and rhizospheric soils of T. officinale and A. australis, but there was no significant (p>0.05) difference in the Shannon's diversity index between non-rhizospheric and rhizospheric soils of S. perfoliatum. The rhizospheric response of weed species to crude oil residues suggested that S. perfoliatum may be a potential weed species for the effective plant-microorganism bioremediation of contaminated soils by crude oil residues.

  6. Utilization of inulin-containing waste in industrial fermentations to produce biofuels and bio-based chemicals.

    Science.gov (United States)

    Hughes, Stephen R; Qureshi, Nasib; López-Núñez, Juan Carlos; Jones, Marjorie A; Jarodsky, Joshua M; Galindo-Leva, Luz Ángela; Lindquist, Mitchell R

    2017-04-01

    Inulins are polysaccharides that belong to an important class of carbohydrates known as fructans and are used by many plants as a means of storing energy. Inulins contain 20 to several thousand fructose units joined by β-2,1 glycosidic bonds, typically with a terminal glucose unit. Plants with high concentrations of inulin include: agave, asparagus, coffee, chicory, dahlia, dandelion, garlic, globe artichoke, Jerusalem artichoke, jicama, onion, wild yam, and yacón. To utilize inulin as its carbon and energy source directly, a microorganism requires an extracellular inulinase to hydrolyze the glycosidic bonds to release fermentable monosaccharides. Inulinase is produced by many microorganisms, including species of Aspergillus, Kluyveromyces, Penicillium, and Pseudomonas. We review various inulinase-producing microorganisms and inulin feedstocks with potential for industrial application as well as biotechnological efforts underway to develop sustainable practices for the disposal of residues from processing inulin-containing crops. A multi-stage biorefinery concept is proposed to convert cellulosic and inulin-containing waste produced at crop processing operations to valuable biofuels and bioproducts using Kluyveromyces marxianus, Yarrowia lipolytica, Rhodotorula glutinis, and Saccharomyces cerevisiae as well as thermochemical treatments.

  7. In vitro investigations of Cynara scolymus L. extract on cell physiology of HepG2 liver cells

    Directory of Open Access Journals (Sweden)

    Gesine Löhr

    2009-06-01

    Full Text Available The objective of this study was the investigation of a potential influence of artichoke leaf extract (ALE on the cell physiology and gene expression of phase I/II enzymes of human liver cells HepG2 and investigation on potential cell protective effects against ethanol-induced cell toxicity against HepG2 cells. Cell biological assays under in vitro conditions using HepG2 liver cells and investigation of mitochondrial activity (MTT test, proliferation assay (BrdU incorporation ELISA, LDH as toxicity marker, gene expression analysis by RT-PCR and enzyme activity of glutationtransferase. Artichocke extract, containing 27% caffeoylquinic acids and 7% flavonoids induced mitochondrial activity, proliferation and total protein content under in vitro conditions in human liver cells HepG2. These effects could not be correlated to the well-known artichoke secondary compounds cynarin, caffeic acid, chlorogenic acid, luteolin and luteolin-7-O-glucoside. The flavones luteolin and luteolin-7-O-glucoside had inhibitory effects at 100 µg/mL level on HepG2 cells, with luteolin being a significant stronger inhibitor compared to the respective glucoside. Artichoke leaf extract had minor stimulating effect on gene expression of CYP1A2, while CYP3A4, GGT, GPX2, GSR and GST were slightly inhibited. GST inhibition under in vitro conditions was also shown by quantification of GST enzyme activity. Induction of gene expression of CYP1A2 was shown to be supraadditive after simultaneous application of ethanol plus artichoke extract. Artichoke leaf extract exhibited cell protective effects against ethanol-induced toxicity within cotreatment under in vitro conditions. Also H2O2 damage was significantly inhibited by simultaneous artichoke incubation. Pre- and posttreatments did not exert protective effects. DMSO-induced toxicity was significantly reduced by pre-, post- and cotreatment with artichoke extract and especially with luteolin-7-O-glucoside, indicating a direct

  8. Reasoned opinion on the modification of the existing MRLs for thiamethoxam and clothianidin in various crops

    Directory of Open Access Journals (Sweden)

    European Food Safety Authority

    2012-11-01

    Full Text Available In accordance with Article 6 of Regulation (EC No 396/2005, Spain herewith referred to as the evaluating Member State Spain (EMS Spain, received and application from Syngenta Agro to modify the existing MRLs for the active substance thiamethoxam in artichokes, table olives and olives for oil production and for clothianidin in table olives and olives for oil production, based on the intended use of thiamethoxam. Spain received also another application from Syngenta Crop Protection AG to modify the existing MRLs for thiamethoxam and clothianidin in cauliflower, based on the intended use of thiamethoxam. In order to accommodate for the intended SEU use of thiamethoxam, the EMS Spain proposed to raise the existing MRLs for thiamethoxam in table olives and olives for oil production from 0.05 mg/kg to 0.5 mg/kg and to raise the existing MRLs for clothianidin in table olives, olives for oil production and cauliflower, resulting from the use of thiamethoxam from 0.02 mg/kg to 0.09 and 0.05 mg/kg, respectively. For artichokes, the existing MRLs for thiamethoxam and clothianidin, and for cauliflower the existing MRL for thiamethoxam, do not need to be modified. Germany, herewith referred to as the evaluating Member State Germany (EMS Germany, compiled an application to raise the existing MRLs for clothianidin in herbs (except chervil to 1.5 mg/kg, based on the intended NEU use of clothianidin. According to EFSA, the data are sufficient to derive MRL proposals for thiamethoxam and clothianidin in the crops under consideration. Based on the risk assessment results, EFSA concludes that the intended use of thiamethoxam on table olives, olives for oil production, cauliflower and artichokes as well as the intended use of clothianidin on herbs, will not result in a consumer exposure exceeding the toxicological reference values and therefore is unlikely to pose a public health concern. EFSA notes that Member States when granting new authorizations on the use of

  9. FORMULATION OF SYNBIOTIC DRINK TO ENHANCE INTESTINAL GUT FLORA

    Directory of Open Access Journals (Sweden)

    P. L. Sridevi Sivakami

    2011-12-01

    Full Text Available The transition in diet has lead to an increase in lifestyle disorders and thereby increased dependency on wonder drugs. With increased drug discovery and marketing, there is a compelling trend towards large drug dosage. However, food is judged not only for its nutritive properties but also for its ability to improve the health and well being of consumers, thus leading to the advent of “FUNCTIONAL FOODS”. Probiotic organisms of the gut and prebiotics are two under explored functional foods. Hence the current study was done with the aim of formulating a synbiotic health drink to enhance the intestinal flora. Dietary prebiotic sources like whole wheat, oats, soyabean, samai and artichoke were used in the preparation of the health drink. Whole wheat, samai and soyabean was malted separately, shade dried and powdered. Standard procedure was followed while preparing artichoke powder. All the selected ingredients were blended together along with one gram of lyophilized vacuum dried lactic acid bacillus. Six variations of the drink was prepared and organoleptically evaluated to find the most accepted variation. On sensory evaluation, Variation II was graded to be very good in all aspects like appearance, taste, texture, colour and flavour. Ten grams of the best accepted variation II contained 4.7g of malted soyabean, 2.3g of oats powder, 1.2g each of malted wheat and malted samai and 0.5g of artichoke. The above variation also provided more energy (37.84 Kcal, protein (2.58g, fibre (1.23g and less fat (0.07g. The nutrient content was analysed in the laboratory for energy, protein, fat, fibre and inulin (3.65g content. The drink when supplemented was also found to reduce the faecal pathogenic load. Hence it can be concluded that the formulated synbiotic drink was low cost, nutritionally rich and also enhanced the intestinal flora. This drink can sure be considered as a potential nutritional supplement and a ideal alternative to drugs.

  10. Development of a full-genome cDNA clone of Citrus leaf blotch virus and infection of citrus plants.

    Science.gov (United States)

    Vives, María Carmen; Martín, Susana; Ambrós, Silvia; Renovell, Agueda; Navarro, Luis; Pina, Jose Antonio; Moreno, Pedro; Guerri, José

    2008-11-01

    Citrus leaf blotch virus (CLBV), a member of the family Flexiviridae, has a ~9-kb single-stranded, positive-sense genomic RNA encapsidated by a 41-kDa coat protein. CLBV isolates are associated with symptom production in citrus including leaf blotching of Dweet tangor and stem pitting in Etrog citron (Dweet mottle disease), and some isolates are associated with bud union crease on trifoliate rootstocks, but Koch's postulates for this virus were not fulfilled. A full-genome cDNA of CLBV isolate SRA-153, which induces bud union crease, was placed under the T7 promoter (clone T7-CLBV), or between the 35S promoter and the Nos-t terminator, with or without a ribozyme sequence downstream of the CLBV sequence (clones 35SRbz-CLBV and 35S-CLBV). RNA transcripts from T7-CLBV failed to infect Etrog citron and Nicotiana occidentalis and N. benthamiana plants, whereas agro-inoculation with binary vectors carrying 35SRbz-CLBV or 35S-CLBV, and the p19 silencing suppressor, caused systemic infection and production of normal CLBV virions. Virus accumulation was similar in citron plants directly agro-infiltrated, or mechanically inoculated with wild-type or 35SRbz-CLBV-derived virions from Nicotiana, and the three sources incited the symptoms characteristic of Dweet mottle disease, but not bud union crease. Our results show that (1) virions derived from an infectious clone show the same replication, movement and pathogenicity characteristics as the wild-type CLBV; (2) CLBV is the causal agent of Dweet mottle disease but not of the bud union crease syndrome; and (3) for the first time an RNA virus could be successfully agro-inoculated on citrus plants. This infectious clone may become a useful viral vector for citrus genomic studies.

  11. Acute Lymphoblastic Leukemia Presented as Multiple Breast Masses

    Energy Technology Data Exchange (ETDEWEB)

    Bayrak, Ilkay Koray; Yalin, Turkay; Ozmen, Zafer; Aksoz, Tolga; Doughanji, Roula [Ondokuz Mayis University, Samsun (Turkmenistan)

    2009-10-15

    Breast metastases in cases leukemia are very rare and occur primarily in patients with acute myeloid leukemia. We report the involvement of breast metastases in a 30-year-old woman with acute T cell lymphoblastic leukemia. The patient's mammograms revealed an extremely dense pattern with ill-defined, denser mass-like lesions in both breasts. A bilateral breast ultrasonographic evaluation revealed lobular-shaped and partly ill-defined hypoechoic masses with a multi-septated nodular (mottled) appearance.

  12. 福建口岸首次截获玉米褪绿斑驳病毒和玉米矮花叶病毒

    Institute of Scientific and Technical Information of China (English)

    沈建国; 郑荔; 王念武; 虞赟; 李敏; 连德福; 林阳武

    2011-01-01

    2011年4月,福建出入境检验检疫局技术中心植物检疫实验室采用DAS—ELISA、RT—PCR及序列测定验证的方法,从一批阿根廷进境玉米种子上同时检出玉米褪绿斑驳病毒(Maize chlorotic mottle virus,MC.MV)和玉米矮花叶病毒(Maize dwarf mosaic virus,MDMV)。这是福建口岸首次检出上述2种病毒。

  13. Cytogenetic investigations on leucocytes of cattle intoxicated with fluoride

    Energy Technology Data Exchange (ETDEWEB)

    Leonard, A.; Deknudt, G.; Decat, G.; Leonard, E.D.

    1977-04-01

    The sources of atmospheric fluoride include the burning of soft coal and the manufacturing of aluminium, steel, lead, copper, nickel, phosphate fertilizers, brick and pottery kilns. Cattle which grazed in the vicinity of a plant manufacturing enamel and which displayed signs of chronic fluoride poisoning such as osteosclerosis and mottled enamel or dental fluorosis were investigated for the presence of structural chromatid and chromosome aberrations. Venous blood was incubated for 48 h, and 100 cells were analyzed for each animal. No statistical difference in the incidence of such anomalies was observed between the controls and the intoxicated animals.

  14. Hutchinson - Gilford progeria syndrome: A rare case report.

    Science.gov (United States)

    Kashyap, Subhash; Shanker, Vinay; Sharma, Neeraj

    2014-10-01

    Hutchinson - Gilford Progeria Syndrome is a rare genetic disorder characterized by premature aging involving the skin, bones, heart, and blood vessels. We report a three-year-old boy with clinical manifestations characteristic of this syndrome. He had a characteristic "plucked-bird" appearance, prominent eyes and scalp veins, senile look, loss of scalp hair, eyebrows, and eyelashes, stunted growth, and mottled pigmentation with sclerodermatous changes over the trunk and lower limbs. Radiological changes and decreased high-density lipoprotein (HDL) levels were also characteristic of the syndrome. This interesting case is reported for its rarity.

  15. Hutchinson – Gilford progeria syndrome: A rare case report

    Science.gov (United States)

    Kashyap, Subhash; Shanker, Vinay; Sharma, Neeraj

    2014-01-01

    Hutchinson – Gilford Progeria Syndrome is a rare genetic disorder characterized by premature aging involving the skin, bones, heart, and blood vessels. We report a three-year-old boy with clinical manifestations characteristic of this syndrome. He had a characteristic “plucked-bird” appearance, prominent eyes and scalp veins, senile look, loss of scalp hair, eyebrows, and eyelashes, stunted growth, and mottled pigmentation with sclerodermatous changes over the trunk and lower limbs. Radiological changes and decreased high-density lipoprotein (HDL) levels were also characteristic of the syndrome. This interesting case is reported for its rarity. PMID:25396134

  16. Ophioderma peruana, a new species of brittlestar (Echinodermata, Ophiuroidea, Ophiodermatidae from the Peruvian coast

    Directory of Open Access Journals (Sweden)

    Tania Pineda-Enríquez

    2013-12-01

    Full Text Available Ophioderma peruana sp. n. is a new species of Ophiodermatidae, extending the distribution of the genus Ophioderma to Lobos de Afuera Island, Peru, easily distinguishable from its congeners by its peculiarly fragmented dorsal arm plates. Dense granules, rounded or polygonal cover the disc, the radial shields may be naked or completely covered by granules. A good character for recognizing this species in the field is the dorsal side of the disc which is brown with disc granules lighter cream and brown, the arms are mottled with whitish spots and the ventral part of the disc on the interradial part is brown and the radial part bright yellow.

  17. Clamping-induced changes of domain morphology in 88%Pb(Zn{sub 1/3}Nb{sub 2/3})O{sub 3}-12%PbTiO{sub 3}

    Energy Technology Data Exchange (ETDEWEB)

    Chang, L.-W., E-mail: lchang01@qub.ac.uk; Gregg, J. M., E-mail: m.gregg@qub.ac.uk [Centre for Nanostructured Media, School of Maths and Physics, Queen' s University Belfast, Northern Ireland BT7 1NN (United Kingdom); Nagarajan, V.; Okatan, M. B. [School of Materials Science and Engineering, University of New South Wales, New South Wales 2052 (Australia)

    2014-08-14

    Domain microstructures in single crystal lamellae of 88%Pb(Zn{sub 1/3}Nb{sub 2/3})O{sub 3}-12%PbTiO{sub 3} (cut from bulk using focused ion beam milling) have been mapped using both piezoresponse force microscopy and transmission electron microscopy. Dramatic changes from mottled microstructures typical of relaxors to larger scale domains typical of ferroelectrics have been noted. Stresses associated with substrate clamping are suspected as the cause for the transition from short- to long-range polar order, akin to effects induced by cation ordering achieved by thermal quenching.

  18. Altered ATP7A expression and other compensatory responses in a murine model of Menkes disease

    OpenAIRE

    Niciu, Mark J.; Ma, Xin-Ming; Meskini, Rajaâ El; Pachter, Joel S.; Mains, Richard E.; Eipper, Betty A.

    2007-01-01

    Mutations in the copper-transporter ATP7A lead to severe neurodegeneration in the mottled brindled hemizygous male (MoBr/y) mouse and human patients with Menkes disease. Our earlier studies demonstrated cell-type and stage-specific changes in ATP7A protein expression during postnatal neurodevelopment. Here we examined copper and cuproenzyme levels in MoBr/y mice to search for compensatory responses. While all MoBr/y neocortical subcellular fractions had decreased copper levels, the greatest d...

  19. Next generation sequence analysis of the forage peanut (Arachis pintoi virome

    Directory of Open Access Journals (Sweden)

    Pablo Andrés Gutiérrez Sánchez

    2016-07-01

    resulted in the complete genome assembly of Peanut mottle virus (9707 nt, Turnip yellows virus (5578 nt and two variants of a virus with phylogenetic affinity to the genus Allexivirus. These two variants lack ORF6 present in Allexivirus and probably belong to an uncharacterized genus within the family Alphaflexiviridae. The presence of at least three viruses infecting A. pintoi in Colombia highlights the importance of starting a germplasm clean-up program of the plant material used as seed in this crop.

  20. Virus-induced gene silencing in soybean and common bean.

    Science.gov (United States)

    Zhang, Chunquan; Whitham, Steven A; Hill, John H

    2013-01-01

    Plant viral vectors are useful for transient gene expression as well as for downregulation of gene expression via virus-induced gene silencing (VIGS). When used in reverse genetics approaches, VIGS offers a convenient way of transforming genomic information into knowledge of gene function. Efforts to develop and improve plant viral vectors have expanded their applications and have led to substantial advances needed to facilitate gene function studies in major row crops. Here, we describe a DNA-based Bean pod mottle virus (BPMV) vector system for both gene expression and VIGS in soybean and common bean.

  1. Characterization of a member of a new Potyvirus species infecting arracacha in Brazil.

    Science.gov (United States)

    Orílio, A F; Dusi, A N; Madeira, N R; Inoue-Nagata, Alice Kazuko

    2009-01-01

    An arracacha (Arracacia xanthorrhiza) plant collected in Brazil was found to be infected by a new virus. This viral isolate (named C17) systemically infected Nicotiana benthamiana and Apium graveolens. A polyclonal antibody was raised, and analysis of our arracacha germplasm collection showed a high infection rate of C17-like viruses (93% infection). Sequencing of the ca. 1.7 kb 3'-terminal genomic region revealed a typical potyvirus genome organization. It shared less than 70% nucleotide identity with any other potyvirus sequence, which thus indicated that it is possibly a member of a new Potyvirus species tentatively named Arracacha mottle virus (AMoV).

  2. Breakfast in a hotel dining room

    Directory of Open Access Journals (Sweden)

    Mary Kennan Herbert

    2009-01-01

    Full Text Available My father and I were the only ones there on a winter Saturday.Yet a full staff of penguins was on duty, webbed shoes muffled on thick but aging carpet, their lined faces and beaks a bit mottled.They brought us the morning newspaper, toast, coffee, orange juice, grapefruit (a beauty nestled on ice in a pewter tureen, an old-fashioned presentation,with a hint of decay.The hotel was closed shortly thereafter, for a decade, then remodeled,reopened with new crystal, dinnerware with postmodern chi...

  3. Retinal pigment epithelial atrophy following indocyanine green dye-assisted surgery for serous macular detachment

    Directory of Open Access Journals (Sweden)

    Hussain Nazimul

    2008-01-01

    Full Text Available To report subretinal migration of indocyanine green dye (ICG and subsequent retinal pigment epithelial (RPE atrophy during macular surgery for serous macular detachment. A 65-year-old woman presented with residual epiretinal membrane and serous detachment of the macula following vitreoretinal surgery for epiretinal membrane. She underwent resurgery with ICG-assisted internal limiting membrane peeling and intraocular tamponade. Intraoperatively a large area of subretinal ICG was seen with subsequent RPE mottling and atrophy of the macula in the area involved during follow-up. This case demonstrates that subretinal migration of ICG is possible and can be toxic to RPE.

  4. Genome sequence of a virus isolate from tamarillo (Solanum betaceum) in Colombia: evidence for a new potyvirus.

    Science.gov (United States)

    Gutiérrez, Pablo A; Alzate, Juan F; Marín Montoya, Mauricio

    2015-02-01

    Based on the results of a deep sequencing transcriptome study of tamarillo (Solanum betaceum), we report the genome sequence of a virus from this host plant. Since this probably represents a new member of the genus Potyvirus, the name tamarillo leaf malformation virus (TaLMV) has been proposed. Phylogenetic analysis reveals that TaLMV is the closest relative of Colombian datura virus (CDV), followed by three other potyviruses: tobacco etch virus, potato virus A and tobacco vein mottling virus. This is the first sequence of a potyvirus infecting Solanum betaceum containing the complete polyprotein coding region.

  5. Effect of endogenously synthesized and exogenously applied ethanol on tomato fruit ripening

    Energy Technology Data Exchange (ETDEWEB)

    Kelly, M.O.; Saltveit, M.E. Jr.

    1988-09-01

    Tomato (Lycopersicon esculentum Mill. var Castlemart) fruit ripening was inhibited by tissue concentrations of ethanol that were produced by either exposure to exogenous ethanol vapors or synthesis under anaerobic atmospheres. Ethanol was not detected in aerobically ripened tomato fruit. Ripening was not inhibited by exposure to methanol at an equivalent molar concentration to inhibitory concentrations of ethanol, while ripening was slightly more inhibited by n-propanol than by equivalent molar concentrations of ethanol. The mottled appearance of a few ripened ethanol-treated fruit was not observed in n-propanol-treated fruit.

  6. The embedded feature model for the interpretation of chromospheric contrast profiles

    Science.gov (United States)

    Steinitz, R.; Gebbie, K. B.; Bar, V.

    1977-01-01

    Contrast profiles obtained from chromospheric filtergrams and spectra of bright and dark mottles have to date been interpreted almost exclusively in terms of Becker's cloud model. Here we demonstrate the failure of this model to account in a physically consistent way for the observed contrasts. As an alternative, we introduce an embedded-feature model, restricting our discussion in this paper to stationary features. Our model is then characterized by three independent parameters: the density of absorbing atoms, the geometrical depth, and the profile of the absorption coefficient. An analytic approximation to the contrast resulting from such a model reproduces well the observed behavior of all types of contrast profiles.

  7. Obstructing mass lesion of epiglottis: it can be tubercular.

    Science.gov (United States)

    Gupta, Rajesh; Fotedar, Sajay; Sansanwal, Pradeep; Yadav, S P S; Gupta, Anupama; Gupta, K B; Saini, Kuldeep

    2008-04-01

    We report a case of 60-year old male who had difficulty in breathing as well as in swallowing. On examination, he was found to be having proliferative growth of epiglottis and right aryepiglottic fold mimicking neoplasm. So emergency tracheostomy was performed and biopsy taken. He was found to be having asymptomatic miliary mottling on routine x-ray chest PA view. Further on HRCT, it turned out to be lesion suggesting tubercular etiology. Histopathology (epiglottic biopsy) report confirmed the whole process as tubercular. The patient recovered promptly in due course with anti-tubercular treatment. Point remains to be seen that if we can avoid tracheostomy and its complications in such cases.

  8. Improving abdomen tumor low-dose CT images using a fast dictionary learning based processing

    Science.gov (United States)

    Chen, Yang; Yin, Xindao; Shi, Luyao; Shu, Huazhong; Luo, Limin; Coatrieux, Jean-Louis; Toumoulin, Christine

    2013-08-01

    In abdomen computed tomography (CT), repeated radiation exposures are often inevitable for cancer patients who receive surgery or radiotherapy guided by CT images. Low-dose scans should thus be considered in order to avoid the harm of accumulative x-ray radiation. This work is aimed at improving abdomen tumor CT images from low-dose scans by using a fast dictionary learning (DL) based processing. Stemming from sparse representation theory, the proposed patch-based DL approach allows effective suppression of both mottled noise and streak artifacts. The experiments carried out on clinical data show that the proposed method brings encouraging improvements in abdomen low-dose CT images with tumors.

  9. A First Look at the Turnover Dynamics of Low Molecular Weight Organic Carbon in Shallow and Deep Soils of Coastal Prairie Grassland Ecosystem

    Science.gov (United States)

    Mcfarland, J. W.; Lawrence, C. R.; Haw, M.; Waldrop, M. P.

    2015-12-01

    The functional importance of low molecular weight organic compounds (LMWOC) is in disproportion to their abundance within soil organic carbon (SOC) pools. They are critical in driving microbial metabolism, though microbial utilization of LMWOC is likely dependent on C chemistry. Studies of C turnover in soils tend to focus in shallower horizons despite that for many ecosystems a substantial fraction of SOC resides below 1 m. In this study, we examined the fate of two important components of soluble SOC, sugars and carboxylic acids, through a soil profile extending to 150 cm. Our objective was to evaluate the turnover of LMWOC under varying physical, biological, and chemical conditions through the soil column. Our study area is part of a soil chronosequence near Santa Cruz, CA. From the side wall of a soil pit we installed intact soil collars and injected 13C-labeled glucose (GLU), 13C-labeled oxalic acid (OA), or deionized water (control) into the A, B (argillic) , and B/C (mottled) horizons at depths of 25, 75, and 125 cm, respectively. We sampled soil gas for 13CO2 intensively at graduated sampling intervals (6 hours to 2 weeks). The entire experiment was also replicated in the laboratory. We measured dissolved organic C (DOC) and microbial biomass C (MBC), and calculated total recovery of 13C in atmospheric and soil pools. Measures of DOC indicated a significant priming effect in the deepest (mottled) horizon and an increase in MBC in the argillic and mottled horizons. In all instances residence time was significantly lower for GLU than OA and increased with depth for both substrates. Mass balance calculations from the laboratory component indicated stronger retention for GLU than OA for the upper soils; however, this trend reversed below the argillic horizon. We hypothesize the greater retention of OA in the deepest (mottled) soil horizon may result from enhanced organo-metal complexation (e.g., between OA and dissolved Fe or Al). This hypothesis is consistent

  10. Hutchinson - Gilford progeria syndrome: A rare case report

    Directory of Open Access Journals (Sweden)

    Subhash Kashyap

    2014-01-01

    Full Text Available Hutchinson - Gilford Progeria Syndrome is a rare genetic disorder characterized by premature aging involving the skin, bones, heart, and blood vessels. We report a three-year-old boy with clinical manifestations characteristic of this syndrome. He had a characteristic "plucked-bird" appearance, prominent eyes and scalp veins, senile look, loss of scalp hair, eyebrows, and eyelashes, stunted growth, and mottled pigmentation with sclerodermatous changes over the trunk and lower limbs. Radiological changes and decreased high-density lipoprotein (HDL levels were also characteristic of the syndrome. This interesting case is reported for its rarity.

  11. Microtextural Characteristics and Origin of Dolomites in the Tepearasi Formation, SW of Beysehir-Konya, Turkey

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    The Tepearasi Formation of the autochthonous Geyikdagi Group in the Central Tauride Belt, SE of Beysehir, is Dogger in age and consists dominantly of massive limestones and greyish dolomites occurring within the middle to upper sections. The total thickness of the dolomitic levels ranges from 100–300 m and laterally extends 500–700 m. Three types of dolomite were distinguished through petrographic analyses: homogeneous, mottled (saddle-crystalline) and joint-filling dolomite, which were interpreted to have formed in two different stages, early diagenetic and late diagenetic. The homogeneous dolomite of the early diagenetic stage is light-coloured and monotonous-textured and shows the form of a dolosparite mosaic. The mottled dolomite formed in the late diagenetic stage is light- to dark-coloured and coarsely granular idiomorphic. The other type of late diagenetic dolomite, described as the joint-filling type, presents a crystal growth pattern from the joint walls towards the centre of the joint space. It is associated with coarse calcite crystals as well as primary dolomite crystal clasts which were formed in the early diagenetic stage. In addition to these characteristics, cataclastic texture indicating the influence of tectonism is also observed. Microtexture-oriented scanning electron microscopy (SEM) studies indicate that mottled dolomites show zonal structures and contain secondary dissolution vugs. SEM studies also revealed the existence of some remains (calcite, clay etc.) in joint-filling dolomites. Analyses by energy dispersive spectrometry (EDS) indicate the existence of clay minerals (likely to be illite) in the pores of dolomite. Isotope studies conducted to shed light onto the origin of the dolomites of the Tepearasi Formation yielded the results of ?18O= –2.48 to – 3.87‰ and ?13C=0.93 to 1.12‰ for the early diagenetic homogeneous dolomites. Mottled and joint-filling type dolomites of the late diagenetic stage, on the other hand, gave the

  12. A Multiscale Factorization Method for Simulating Mesoscopic Systems with Atomic Precision

    CERN Document Server

    Mansour, Andrew Abi

    2013-01-01

    Mesoscopic N-atom systems derive their structural and dynamical properties from processes coupled across multiple scales in space and time. An efficient method for understanding and simulating such systems from the underlying N-atom formulation is presented. The method integrates notions of multiscale analysis, Trotter factorization, and a hypothesis that the momenta conjugate to coarse-grained variables can be treated as a stationary random process. The method is demonstrated for Lactoferrin protein, Nudaurelia Capensis Omega Virus, and Cowpea Chlorotic Mottle Virus to assess its accuracy and scaling with system size.

  13. Rb-Sr and Sm-Nd Ages of Zagami DML and SR Isotopic Heterogeneity in Zagami

    Science.gov (United States)

    Nyquist, L.aurenceE.; Shih, C.-Y.; Reese, Y. D.

    2010-01-01

    Zagami contains lithologic heterogeneity suggesting that it did not form in a homogeneous, thick lava flow [1]. We have previously investigated the Sr and Nd isotopic systematics of Coarse-Grained (CG) and Fine-Grained (FG) lithologies described by [2]. Both appear to belong to Normal Zagami (NZ) [1,3], but their initial Sr-isotopic compositions differ [4,5]. Here we report new analyses of the Dark Mottled Lithology (DML, [3]) that show its age and initial Sr and Nd isotopic compositions to be identical within error limits with those of CG, but Sr initial isotopic compositions differ from those of FG.

  14. Proteins in the roots of the perennial weeds chicory (Cichorium intybus L.) and dandelion (Taraxacum officinale Weber) are associated with overwintering.

    Science.gov (United States)

    Cyr, D R; Derek Bewley, J

    1990-10-01

    Roots are the overwintering structures of herbaceous perennial weeds growing in temperate climates. During the fall they accumulated reserves which are remobilized when growth resumes in the spring. An 18kDa (kilodalton) protein increases in both chicory and dandelion roots during the fall months. The proteins in both species are antigenically similar, and are recognized also by an antibody to a storage-protein deposited in Jerusalem artichoke (Helianthus tuberosus) tubers. In chicory, the protein is root-specific, but in dandelion it is detectable in the flowers, vestigial stem and the seed. Electrophoretic characterization of the 18-kDa protein shows that it is a single polypeptide, without subunits, with charge isomers of pI values close to pH 6.5. The major protein present in chicory and dandelion roots is unlike the vegetative storage proteins recently found in soybean or the storage proteins in the bark of trees.

  15. Natural products - plenty more where that came from

    Energy Technology Data Exchange (ETDEWEB)

    Arnold, M.

    1980-12-22

    In this article, natural products and their possible use as renewable resources are reviewed. The fermentation of corn for the production of alcohol for motor fuel is discussed and other crops for this purpose include sugar cane, cassava, sweet potato and Jerusalem artichoke. The hydrolysis of cellulose to sugars based on enzyme hydrolysis is currently being researched in the USA. Also in the USA, Melvin Calvin hopes to breed a rubber-bearing plant whose latex can be easily cracked to motor fuel. Guayule and jojoba rubber-bearing plants are also the focus of research at present. The importance of natural vegetation in the manufacturing of medicines and in the chemical and food industries is stressed. Finally products of the sea, particularly alginates and carragheenins are mentioned, but as yet, the full potential of the sea to yield renewable resources is unknown.

  16. [Malabsorption of fermentable oligo-, di-, or monosaccharides and polyols (FODMAP) as a common cause of unclear abdominal discomfort].

    Science.gov (United States)

    Goebel-Stengel, M; Mönnikes, H

    2014-06-01

    Carbohydrate malabsorption is a frequent but underestimated cause of unexplained gastrointestinal symptoms like meteorism, flatulence, pain and diarrhea. By means of hydrogen and/or methane breath test after ingestion of the respective carbohydrate it can be identified and diagnosed easily, fast and reliably by successful nutritional therapy. Besides the well known complaints caused by lactose and fructose malabsorption, other fermentable oligo-, di-, or monosaccharides and polyols (akronym: FODMAP) can cause abdominal discomfort and IBS-like symptoms. In addition to lactose (dairy products) and fructose (apples, pears, mango, watermelon), FODMAPs comprise galactans (legumes), fructans (wheat, onions, garlic, artichoke) and the artificial sweeteners sorbitol, mannitol, maltitol and xylitol (sugar free candy, light products). A general restriction of all FODMAP components can be beneficial in relieving symptoms and improving quality of life in patients with functional gastrointestinal complaints.

  17. 提高青菜头泡菜品质初探%Initial Studies on Improving Quality of Mustard Tube Pickle

    Institute of Scientific and Technical Information of China (English)

    曾凡坤; 侯东军

    2011-01-01

    The multiplication of Bifidobacterium Longum in artificial inoculate pickles fermented by Lactobacillus plantamm was mainly studied in the paper. A few of growth factors were compared. The medium fermented solution formula and the best conditions were determined. The Bifidobacterium Longum number of pickle in different packages were compared finally. The results showed that: three different extraction liquid of Jerusalem artichoke, potatoes, soybean had proliferation faction to Bifidobacterium Longumr and Jerusalem artichoke was the best. 20% tomato juice and 2% extractions from Jerusalem artichoke in skim milk could accelerate to produce acid and attain higher Bifidobacterium Longum number. The best formula of fermenting liquid was 1.0% salt, 20% tomato juice, 1.0% glucose, 2.0% soybean milk and 2% Jerusalem artichoke extraction. The best mixed fermentation conditions were bacteria ratio of 2:1, pH6.8 inoculum concentration of 6% at 36 °C. Pickle had a good taste with ratio of mixed at 1:2 of Bifidobacterium Longum and lactobacillus, cultured for 18~24h and 16h individually. The vacuum-packed could be good to keep higher Bifidobacterium Longum number.%本文研究了长双歧杆菌在人工接种植物乳杆菌发酵泡菜中的增殖情况,比较了几种双歧增殖因子,确定了种子培养基、发酵液配方、最佳发酵条件及单一发酵后产品混合配比,并研究了泡菜在不同包装条件下长双歧杆菌活菌数变化情况.结果表明:菊芋、马铃薯、大豆三种抽提液均对长双歧杆菌有增殖作用,菊芋抽提液效果更好.脱脂乳+20%番茄汁+2%菊芋抽提液作为种子培养基产酸速度快,双歧杆菌活菌数高;发酵液最佳配方:1.0%食盐、20%番茄汁、1.0%葡萄糖、2.0%豆浆、2.0%菊芋抽提液;混菌发酵条件∶接种比例为2∶1、接种量为6%、发酵温度36℃、初始pH值为6.8;长双歧杆菌和植物乳杆菌分别单一培养18h~24h和16h后,按1∶2混

  18. Estimation of un-used land potential for biofuels development in China

    Energy Technology Data Exchange (ETDEWEB)

    Tian, Yishui [Chinese Academy of Agricultural Engineering, Beijing 100026 (China); Maelardalen University, Vaesteraas SE-721 23 (Sweden); Zhao, Lixin; Meng, Haibo; Sun, Liying [Chinese Academy of Agricultural Engineering, Beijing 100026 (China); Yan, Jinyue [Maelardalen University, Vaesteraas SE-721 23 (Sweden); Royal Institute of Technology, SE-100 44 Stockholm (Sweden)

    2009-11-15

    This paper presents the current status of biofuel development and estimates the potential of un-used land for biofuel development. The potential of crops including cassava, sweet potato, sweet sorghum, sugarcane, sugar beet and Jerusalem artichoke were assessed and discussed for different regions considering the geographical conditions and features of agricultural production. If reserved land resources are explored together with substitute planting implemented and unit area yield improved, potential production of ethanol fuel will be 22 million ton in 2020. The study also recommends the use of winter idle lands for rapeseed plantation for biofuel production. The potential for production of biodiesel by rapeseed and cottonseed can reach to 3.59 million ton. (author)

  19. Solid phase fermentation of Helianthus tuberosus for ethanol

    Energy Technology Data Exchange (ETDEWEB)

    Baerwald, G.; Hamad, S.H.

    1989-01-01

    The direct fermentation of pure inulin and hammer mill crushed Helianthus tuberosus tubers (topinambur, Jerusalem artichoke) was studied using two heat-tolerant yeasts, namely Kluyveromyces marxianus and Candida kefyr. A Saccharomyces cerevisiae was included in the study so as to compare the yields of these two yeasts with that of a commercial distiller's yeast. The inulin fermentation was carried out in an 18-L bioreactor using the fed-batch and the batch-fermentation methods. The final ethanol concentration was 6.1% (L/L) which represents 82% of the theoretical yield. Commercial scale experiments with hammer mill crushed tubers gave yields lower than those found in the laboratory: 69% of the theoretical yield for direct fermentation without enzyme addition, and about 91% when cellolytic enzymes were added.

  20. Application of "magnetic tongue" to the sensory evaluation of extra virgin olive oil.

    Science.gov (United States)

    Lauri, Ilaria; Pagano, Bruno; Malmendal, Anders; Sacchi, Raffaele; Novellino, Ettore; Randazzo, Antonio

    2013-10-15

    The perception of odour and flavour of foods is a complicated physiological and psychological process that cannot be explained by simple models. Unfortunately, taste is not objective, but partially subjective and it depends also on the mood of the taster. Generally, sensory analysis is used to describe sensory features. The availability of a number of instrumental techniques has opened up the possibility to calibrate the sensory perception. Here we have tested the potentiality of nuclear magnetic resonance spectroscopy as "magnetic tongue" to measure sensory descriptors in extra-virgin olive oil. We were able to correlate the NMR metabolomic fingerprints of extra-virgin olive oil to the sensory descriptors: tomato, bitter, pungent, rosemary, artichoke, sweet, grassy and leaf.

  1. Systemic allergic dermatitis caused by sesquiterpene lactones

    DEFF Research Database (Denmark)

    Paulsen, Evy

    2017-01-01

    Patients with Compositae sensitization are routinely warned against the ingestion of vegetables, spices, teas and herbal remedies from this family of plants. The evidence for the occurrence of systemic allergic dermatitis caused by sesquiterpene lactone-containing plants is mostly anecdotal...... and based on statements from patients rather than scientific data. However, a few clinical reports on accidental sensitization and exposure and oral challenge prove the existence of this kind of reaction, most convincingly for strong contact allergens such as costunolide in bay leaves, and less so for weak...... allergens such as those of lettuce. Other Compositae species suspected of causing systemic reactions are artichoke, mugwort, yarrow, dandelion, feverfew, and elecampane. Some Compositae vegetables and teas, such as lettuce and chamomile tea, may induce systemic reactions through both humoral and cell...

  2. policosanols, OPC from French maritime pine bark, garlic dry extract standardised in allicin, d - α - tocopheryl hydrogen succinate , riboflavin and inositol hexanicotinate in Limicol ® and reduction of blood LDL - cholesterol concentrations pursuant to Article 14 of Regulation (EC) No 1924/2006

    DEFF Research Database (Denmark)

    Tetens, Inge

    claim related to the combination of artichoke leaf dry extract standardised in caffeoylquinic acids, monacolin K in red yeast rice, sugar-cane derived policosanols, OPC from French maritime pine bark, garlic dry extract standardised in allicin, d-α-tocopheryl hydrogen succinate, riboflavin and inositol......-cholesterol is a risk factor in the development of coronary heart disease. In weighing the evidence, the Panel took into account that, although no evidence was provided for an LDL-cholesterol lowering effect of any of the single food constituents in Limicol® at the proposed conditions of use or as to how...... policosanols, OPC from French maritime pine bark, garlic dry extract standardised in allicin, d-α-tocopheryl hydrogen succinate, riboflavin and inositol hexanicotinate in Limicol® and a reduction in blood LDL-cholesterol concentrations. © European Food Safety Authority, 2013...

  3. Penicillium subrubescens, a new species efficiently producing inulinase

    DEFF Research Database (Denmark)

    Mansouri, S.; Houbraken, J.; Samson, R.A.;

    2013-01-01

    were released while the levels of oligofructans were low, indicating an exoinulinase type of activity. Taxonomic study of the inulinase producing strain showed that this isolate represents a new species belonging in Penicillium section Lanata-divaricata. This new species produces a unique combination...... of extrolites and is phenotypically and phylogenetically closely related to Penicillium pulvillorum. We propose the name Penicillium subrubescens sp. nov. (CBS 132785T = FBCC 1632T) for this new species.......Inulin is a reserve carbohydrate in about 15 % of the flowering plants and is accumulated in underground tubers of e.g. chicory, dahlia and Jerusalem artichoke. This carbohydrate consists of linear chains of β-(2,1)-linked fructose attached to a sucrose molecule. Inulinases hydrolyse inulin...

  4. Unconventional biomasses as feedstocks for production of biofuels and succinic acid in a biorefinery concept

    DEFF Research Database (Denmark)

    Gunnarsson, Ingólfur Bragi

    Biorefinery has the potential of displacing fossil fuels and oil-refinery based products. Within the biorefinery a palette of marketable commodities can be produced from biomass, including food, feed, biochemicals and biofuels. Which bioproducts are produced is largely dependent on the chemical....... The chemical composition of biomasses was determined in order to demonstrate their biorefinery potential. Bioethanol and biogas along with succinic acid production were the explored bioconversion routes, while potential production of other compounds was also investigated. Differences and changes in biomass...... biogas upgrading technologies deliver. Results obtained in this study constitute the first report for utilization of macroalgae, hemp and Jerusalem artichoke tuber biomass for fermentative succinic acid production. It was demonstrated that all biomasses are attractive biomass feedstocks for succinic acid...

  5. TVA/DOE integrated onfarm alcohol production system. Phase II. Progress report, October 1981-February 1982. Circular Z-134

    Energy Technology Data Exchange (ETDEWEB)

    Badger, P.C.; Pile, R.S.; Burch, D.W.; Mays, D.A.; Lewis, J.M.

    1982-03-01

    Equipment and procedures necessary for using a grain (corn) feedstock for onfarm alcohol production were refined and documented to provide benchmark data. Also, significant progress was made in developing technology to convert other agricultural crops into 190-proof alcohol with the farm-sized alcohol production facility. This was achieved by modifying the base alcohol-from-grain facility to process the nongrain feedstocks (Irish potatoes, sweet sorghum, sweet potatoes, sugar beets, fodder beets, and Jerusalem artichokes) being evaluated in field production trials by TVA. Alcohol production capacities of cull potatoes, water chestnuts, and cull apples were also tested. A computerized investment model was refined to predict rapidly the economic implications for alcohol production levels, feedstocks, and various system components.

  6. Radiation preservation of foods of plant origin. Part VI. Mushrooms, tomatoes, minor fruits and vegetables, dried fruits, and nuts

    Energy Technology Data Exchange (ETDEWEB)

    Thomas, P.

    1988-01-01

    In this concluding article in the series on the technological feasibility of ionizing radiation treatment for shelf life improvement of fruits and vegetables, the present status of research on several commodities that have not been dealt with earlier is discussed. The commodities include mushrooms, tomatoes, pineapples, lychees, longans, rambutans, mangostenes, guavas, sapotas, loquats, ber, soursops, passion fruits, persimmons, figs, melons, cucumbers, aubergines, globe artichokes, endives, lettuce, ginger, carrots, beet roots, turnips, olives, dates, chestnuts, almonds, pistachios, and other dried fruits and nuts. Changes induced by irradiation on metabolism, chemical constituents, and organoleptic qualities are considered while evaluating the shelf life. The commodities have been grouped into those showing potential benefits and those not showing any clear advantages from radiation treatment. Shelf life improvement of mushrooms and insect disinfestation in dried fruits, nuts, and certain fresh fruits appears to have immediate potential for commercial application. 194 references.

  7. Examining the Effects of Oxygen Plasma on Physical and Dyeing Properties of Some Cellulose Fibers

    Directory of Open Access Journals (Sweden)

    Dilara KOCAK

    2016-09-01

    Full Text Available Cotton, Agava Americana and artichoke fibers were treated with plasma with oxygen gas in Diener Vacuum Plasma for 1, 3 and 5 minutes, with 40 kHz low frequency and at 0.3 mbar pressure. After the plasma treatment, fibers' weight loss %, tensile strength, elongation, fiber diameter, surface topography (SEM, colour changes, and light and washing fastness properties were investigated. A positive increase was observed for mechanical and fastness properties after 5 min plasma treatment. The effects of plasma treatments on dyeing properties of fibers were studied. Dyeing properties of plasma treated fibers were improved after 3 min. treatment. SEM results were also proved the improved physical properties and colour changes due to the rough surface structure.DOI: http://dx.doi.org/10.5755/j01.ms.22.3.9368

  8. [Biodegradation of Cellulose-Containing Substrates by Micromycetes Followed by Bioconversion into Biogas].

    Science.gov (United States)

    Prokudina, L I; Osmolovskii, A A; Egorova, M A; Malakhova, D V; Netrusov, A I; Tsavkelova, E A

    2016-01-01

    The ability of micromycetes Trichoderma viride and Aspergillus terreus to decompose the cellulose-containing substrates was studied. Office paper and cardboard, as well as a paper mixture, were found to be the most hydrolyzable. The cellulolytic activity of T. viride was 2-3 times higher than that of A. terreus; the highest values of 0.80 and 0.73 U/mLwere obtained from office paper and the paper mixture, respectively. The micromycete cultivation conditions (composition of culture medium, sucrose cosubstrate addition, seeding method) and the conditions of the fungus biomass treatment for its subsequent bioconversion into biogas by anaerobic microbial communities were optimized. It was shown that pretreatment improves the efficiency of biogas production from lignocellulosic materials under seeding with microbial community of bovine animal manure. After pretreatment of the Jerusalem artichoke phytomass (stems and leaves) and its subsequent bioconversion into biogas by methanogenic community, the biogas yield was increased by 1.5 times.

  9. Impact of zinc supplementation on the improved fructose/xylose utilization and butanol production during acetone-butanol-ethanol fermentation.

    Science.gov (United States)

    Wu, You-Duo; Xue, Chuang; Chen, Li-Jie; Bai, Feng-Wu

    2016-01-01

    Lignocellulosic biomass and dedicated energy crops such as Jerusalem artichoke are promising alternatives for biobutanol production by solventogenic clostridia. However, fermentable sugars such as fructose or xylose released from the hydrolysis of these feedstocks were subjected to the incomplete utilization by the strains, leading to relatively low butanol production and productivity. When 0.001 g/L ZnSO4·7H2O was supplemented into the medium containing fructose as sole carbon source, 12.8 g/L of butanol was achieved with butanol productivity of 0.089 g/L/h compared to only 4.5 g/L of butanol produced with butanol productivity of 0.028 g/L/h in the control without zinc supplementation. Micronutrient zinc also led to the improved butanol production up to 8.3 g/L derived from 45.2 g/L xylose as sole carbon source with increasing butanol productivity by 31.7%. Moreover, the decreased acids production was observed under the zinc supplementation condition, resulting in the increased butanol yields of 0.202 g/g-fructose and 0.184 g/g-xylose, respectively. Similar improvements were also observed with increasing butanol production by 130.2 % and 8.5 %, butanol productivity by 203.4% and 18.4%, respectively, in acetone-butanol-ethanol fermentations from sugar mixtures of fructose/glucose (4:1) and xylose/glucose (1:2) simulating the hydrolysates of Jerusalem artichoke tubers and corn stover. The results obtained from transcriptional analysis revealed that zinc may have regulatory mechanisms for the sugar transport and metabolism of Clostridium acetobutylicum L7. Therefore, micronutrient zinc supplementation could be an effective way for economic development of butanol production derived from these low-cost agricultural feedstocks.

  10. Increased Foraging in Outdoor Organic Pig Production-Modeling Environmental Consequences.

    Science.gov (United States)

    Jakobsen, Malene; Preda, Teodora; Kongsted, Anne Grete; Hermansen, John Erik

    2015-11-02

    Consumers' motivations for buying organic products include a wish of acquiring healthy, environmentally friendly products from production systems that also ensure a high level of animal welfare. However, the current Danish organic pig production faces important challenges regarding environmental impact of the system. High ammonia emissions arise from outdoor concrete areas with growing pigs and sows on pasture possess an increased risk of nitrogen (N) leaching. Direct foraging in the range area is suggested as a way to improve the nutrient efficiency at farm level and to support a more natural behavior of the pig. Thus, by modeling, we investigated the environmental consequences of two alternative scenarios with growing pigs foraging in the range area and different levels of crops available for foraging-grass-clover or a combination of Jerusalem artichokes and lucerne. It was possible to have growing pigs on free-range without increasing N leaching compared to the current practice. The alternative system with Jerusalem artichokes and lucerne (high integration of forage) showed the lowest carbon foot print with 3.12 CO₂ eq kg(-1) live weight pig compared to the current Danish pasture based system with 3.69 kg CO₂ eq kg(-1) live weight pig. Due to positive impact on soil carbon sequestration, the second alternative system based on grass-clover (low integration of forage) showed a similar carbon foot print compared to current practice with 3.68 kg CO₂ eq kg(-1) live weight pig. It is concluded that in practice there is room for development of organic farming systems where direct foraging plays a central role.

  11. Enhancing inulinase yield by irradiation mutation associated with optimization of culture conditions

    Directory of Open Access Journals (Sweden)

    Yafeng Gou

    2015-09-01

    Full Text Available A new inulinase-producing strain was isolated from rhizosphere soils of Jerusalem artichoke collected from Shihezi (Xinjiang, China using Jerusalem artichoke power (JAP as sole carbon source. It was identified as an Aspergillus niger strain by analysis of 16S rRNA. To improve inulinase production, this fungus was subjected to mutagenesis induced by 60Co γ-irradiation. A genetically stable mutant (designated E12 was obtained and it showed 2.7-fold higher inulinase activity (128 U/mL than the parental strain in the supernatant of a submerged culture. Sequential methodology was used to optimize the inulinase production of stain E12. A screening trial was first performed using Plackett-Burman design and variables with statistically significant effects on inulinase bio-production were identified. These significant factors were further optimized by central composite design experiments and response surface methodology. Finally, it was found that the maximum inulinase production (185 U/mL could be achieved under the optimized conditions namely pH 7.0, yeast extract concentration of 5.0 g/L, JAP concentration of 66.5 g/L, peptone concentration of 29.1 g/L, solution volume of 49.4 mL in 250-mL shake flasks, agitation speed of 180 rpm, and fermentation time of 60 h. The yield of inulinase under optimized culture conditions was approximately 1.4-fold of that obtained by using basal culture medium. These findings are of significance for the potential industrial application of the mutant E12.

  12. Cloning and functional analysis of a high DP fructan:fructan 1-fructosyl transferase from Echinops ritro (Asteraceae): comparison of the native and recombinant enzymes.

    Science.gov (United States)

    Van den Ende, Wim; Clerens, Stefan; Vergauwen, Rudy; Boogaerts, David; Le Roy, Katrien; Arckens, Lutgarde; Van Laere, André

    2006-01-01

    Inulin-type fructans are the simplest and most studied fructans and have become increasingly popular as prebiotic health-improving compounds. A natural variation in the degree of polymerization (DP) of inulins is observed within the family of the Asteraceae. Globe thistle (Echinops ritro), artichoke (Cynara scolymus), and Viguiera discolor biosynthesize fructans with a considerably higher DP than Cichorium intybus (chicory), Helianthus tuberosus (Jerusalem artichoke), and Dahlia variabilis. The higher DP in some species can be explained by the presence of special fructan:fructan 1-fructosyl transferases (high DP 1-FFTs), different from the classical low DP 1-FFTs. Here, the RT-PCR-based cloning of a high DP 1-FFT cDNA from Echinops ritro is described, starting from peptide sequence information derived from the purified native high DP 1-FFT enzyme. The cDNA was successfully expressed in Pichia pastoris. A comparison is made between the mass fingerprints of the native, heterodimeric enzyme and its recombinant, monomeric counterpart (mass fingerprints and kinetical analysis) showing that they have very similar properties. The recombinant enzyme is a functional 1-FFT lacking invertase and 1-SST activities, but shows a small intrinsic 1-FEH activity. The enzyme is capable of producing a high DP inulin pattern in vitro, similar to the one observed in vivo. Depending on conditions, the enzyme is able to produce fructo-oligosaccharides (FOS) as well. Therefore, the enzyme might be suitable for both FOS and high DP inulin production in bioreactors. Alternatively, introduction of the high DP 1-FFT gene in chicory, a crop widely used for inulin extraction, could lead to an increase in DP which is useful for a number of specific industrial applications. 1-FFT expression analysis correlates well with high DP fructan accumulation in vivo, suggesting that the enzyme is responsible for high DP fructan formation in planta.

  13. Reasoned opinion on the modification of the existing MRLs for chlorantraniliprole in several root and tuber vegetables and oilseeds

    Directory of Open Access Journals (Sweden)

    European Food Safety Authority

    2013-07-01

    Full Text Available In accordance with Article 6 of Regulation (EC No 396/2005, the United Kingdom, hereafter referred to as the evaluating Member State (EMS, received an application from DuPont (UK Ltd to modify the existing MRLs in several root and tuber vegetables and to set import tolerances in several oilseeds for the active substance chlorantraniliprole. In order to accommodate for the intended uses of chlorantraniliprole, the United Kingdom proposed to raise the existing MRLs in carrots, beetroot, celeriac, horseradish, Jerusalem artichokes, parsnips, parsley root, salsify, swedes, turnips and other root and tuber vegetables, except sugar beet and radish, from the values of 0.02 mg/kg or 0.04 mg/kg (depending on the crop to 0.06 mg/kg and in oilseeds, except peanuts, soya bean and cotton seed, from the limit of quantification of 0.01 mg/kg to 2 mg/kg. The United Kingdom drafted an evaluation report in accordance with Article 8 of Regulation (EC No 396/2005, which was submitted to the European Commission and forwarded to EFSA. According to EFSA the data are sufficient to derive a MRL proposal of 0.06 mg/kg for the intended use on carrots, beetroot, celeriac, horseradish, Jerusalem artichokes, parsnips, parsley root, salsify, swedes, turnips, other root and tuber vegetables. For the import tolerance on rape seed, sunflower seed and the minor oilseeds a MRL of 2 mg/kg is derived. The MRLs proposed for rape seed and sunflower seed are tentative, because the submitted dataset was incomplete (six instead of the eight residue trials. Adequate analytical enforcement methods are available to control the residues of chlorantraniliprole in the commodities under consideration. Based on the risk assessment results, EFSA concludes that the proposed uses of chlorantraniliprole on the crops under consideration will not result in a consumer exposure exceeding the toxicological reference value and therefore are unlikely to pose a consumer health risk.

  14. A review of ozone-induced effects on the forests of central Mexico

    Energy Technology Data Exchange (ETDEWEB)

    Bauer, Maria de Lourdes de [Instituto de Recursos Naturales, Colegio de Postgraduados, Carretera Los Reyes-Texcoco, 56230 Montecillo, Edo. Mexico (Mexico)]. E-mail: libauer@colpos.mx; Hernandez-Tejeda, Tomas [Instituto Nacional de Investigaciones Forestales Agricolas y Pecuarias, Mexico, Col. Viveros de Coyoacan, 04110 Mexico, D.F. (Mexico)

    2007-06-15

    The first report on oxidant-induced plant damage in the Valley of Mexico was presented over 30 years ago. Ozone is known to occur in the Mexico City Metropolitan Area and elsewhere as the cause of chlorotic mottling on pine needles that are 2 years old or older as observed in 1976 on Pinus hartwegii and Pinus leiophylla. Visible evidences for the negative effects of ozone on the vegetation of central Mexico include foliar injury expressed as chlorotic mottling and premature defoliation on pines, a general decline of sacred fir, visible symptoms on native forest broadleaved species (e.g. Mexican black cherry). Recent investigations have also indicated that indirect effects are occurring such as limited root colonization by symbiotic fungi on ozone-damaged P. hartwegii trees and a negative influence of the pollutant on the natural regeneration of this species. The negative ozone-induced effects on the vegetation will most likely continue to increase. - Ozone induced symptoms, poor tree regeneration and limited root colonization by mycorrhiza fungi observed in the valley of Mexico.

  15. A novel member of the genus Nepovirus isolated from Cucumis melo in Japan.

    Science.gov (United States)

    Tomitaka, Yasuhiro; Usugi, Tomio; Yasuda, Fumitoshi; Okayama, Hiroshi; Tsuda, Shinya

    2011-03-01

    An unusual virus was isolated from a Japanese Cucumis melo cv. Prince melon plant showing mild mottling of the leaves. The virus had a broad experimental host range including at least 19 plant species in five families, with most infected plants showing no symptoms on inoculated and uninoculated systemically infected leaves. The virus particles were spherical, approximately 28 nm in diameter, and the coat protein (CP) had an apparent molecular mass of about 55 kDa. The virus possessed a bi-partite genome with two RNA species, of approximately 8,000 and 4,000 nucleotides. Both genome components for the new virus were sequenced. Amino acid sequence identities in CP between the new virus and previously characterized nepoviruses were found to be low (less than 27%); however, in phylogenetic reconstructions the closest relationship was revealed between the new virus and subgroup A nepoviruses. These results suggest that the new virus represents a novel member of the genus Nepovirus. A new name, Melon mild mottle virus, has been proposed for this new virus.

  16. A New Species ofOdorrana Inhabiting Complete Darkness in a Karst Cave in Guangxi, China

    Institute of Scientific and Technical Information of China (English)

    Yunming MO; Weicai CHEN; Huaying WU; Wei ZHANG; Shichu ZHOU

    2015-01-01

    A new species of the genusOdorrana is described from a completely dark karst cave of northeastern Guangxi, southern China. The new species,Odorranalipuensissp. nov., can be distinguished from its congeners by a combination of the following characters: medium size (SVL: 40.7–47.7 mm in males, 51.1–55.4 mm in females);tips of all but ifrst ifnger expanded with circummarginal grooves; smooth, grass-green dorsum with irregular brown mottling; pineal body invisible; throat to upper abdomen with gray mottling; dorsal surfaces of limbs with brown bands; dorsolateral fold absent; tiny spinules on lateral body, temporal region, and anterior and posterior edge of tympanum;white nuptial pad present on ifnger I; males lacking vocal sacs; females having creamy yellow eggs, without black poles. Uncorrected sequence divergences betweenO.lipuensissp. nov. and all homologous 16S rRNA sequences ofOdorrana available on GenBank is equal to or greater than 4.9%. Currently, the new species is only known from the type locality.

  17. THE INCIDENCE OF BIRTHMARKS IN IRANIAN NEONATES

    Directory of Open Access Journals (Sweden)

    H. Shajari

    2007-08-01

    Full Text Available A number of innocent rashes occurs in neonates. They are usually transient and self limited and thus require no therapy but early recognition is important to distinguish these lesions from more serious disorders. In this study, our purpose was to determine the frequency of birthmarks in Iranian neonates. The presence of various types of birthmarks was determined in 503 Iranian neonates under 72 hour of age. The physiological skin changes observed in order to frequency were Epstein pearls in 444 (88.27%, Mongolian spot in 409 (81%, erythema toxicum in 272 (54%, sucking blisters in 264 (52.1%, Salmon patch in 262 (52%, milia in 232 (46%, petechia in 41(0.08% and mottling in 29 (0.06%. Petechia was seen more commonly in vaginal delivery and in babies with more birth weight. Mottling was more common in premature and low birth babies. Our data suggest that the incidence of birthmarks in Iranian neonates is similar to the prevalence reported by others in white neonates.

  18. Gastrointestinal tract perforation: evaluation of MDCT according to perforation site and elapsed time

    Energy Technology Data Exchange (ETDEWEB)

    Kim, Hyun Cheol; Yang, Dal Mo; Kim, Sang Won [Kyung Hee University Hospital at Gangdong, College of Medicine, Kyung Hee University, Department of Radiology, Seoul (Korea, Republic of); Park, Seong Jin [Kyung Hee University Hospital, College of Medicine, Kyung Hee University, Department of Radiology, Seoul (Korea, Republic of)

    2014-06-15

    To evaluate mutidetector computed tomography (MDCT) for the prediction of perforation site according to each gastrointestinal (GI) tract site and elapsed time. One hundred and sixty-eight patients who underwent MDCT before laparotomy for GI tract perforation were enrolled and allocated to an early or late lapse group based on an elapsed time of 7 h. Two reviewers independently evaluated the perforation site and assessed the following CT findings: free air location, mottled extraluminal air bubbles, focal bowel wall discontinuity, segmental bowel wall thickening, perivisceral fat stranding and localised fluid collection. The overall diagnostic accuracy was 91.07 % and 91.67 % for reviewers 1 and 2, respectively, with excellent agreement (kappa 0.86). Accuracies (98.97 % and 97.94 %) and agreements (kappa 0.894) for stomach and duodenum perforation were higher than for other perforation sites. Strong predictors of perforation at each site were: focal bowel wall discontinuity for stomach, duodenal bulb and left colon, mottled extraluminal air bubbles for retroperitoneal duodenum and right colon, and segmental bowel wall thickening for small bowel. The diagnostic accuracy was not different between the early- and late-lapse groups. MDCT can accurately predict upper GI tract perforation with high reliability. Elapsed time did not affect the accuracy of perforation site prediction. (orig.)

  19. Improving assessments of tropospheric ozone injury to Mediterranean montane conifer forests in California (USA) and Catalonia (Spain) with GIS models related to plant water relations

    Science.gov (United States)

    Kefauver, Shawn C.; Peñuelas, Josep; Ustin, Susan L.

    2012-12-01

    The impacts of tropospheric ozone on conifer health in the Sierra Nevada of California, USA, and the Pyrenees of Catalonia, Spain, were measured using field assessments and GIS variables of landscape gradients related to plant water relations, stomatal conductance and hence to ozone uptake. Measurements related to ozone injury included visible chlorotic mottling, needle retention, needle length, and crown depth, which together compose the Ozone Injury Index (OII). The OII values observed in Catalonia were similar to those in California, but OII alone correlated poorly to ambient ozone in all sites. Combining ambient ozone with GIS variables related to landscape variability of plant hydrological status, derived from stepwise regressions, produced models with R2 = 0.35, p = 0.016 in Catalonia, R2 = 0.36, p full OII, in particular visible chlorotic mottling (R2 = 0.60, p < 0.001). The results show that ozone is negatively impacting forest health in California and Catalonia and also that modeling ozone injury improves by including GIS variables related to plant water relations.

  20. Geological study of sedimentary clayey materials of the Bomkoul area in the Douala region (Douala sub-basin, Cameroon) for the ceramic industry

    Science.gov (United States)

    Ngon Ngon, Gilbert François; Etame, Jacques; Ntamak-Nida, Marie Joseph; Mbog, Michel Bertrand; Mpondo, Anne Maureen Maliengoue; Gérard, Martine; Yongue-Fouateu, Rose; Bilong, Paul

    2012-06-01

    A geological study carried out in the Bomkoul area (Douala sub-basin, Cameroon) has revealed the presence of heterogeneous clayey materials on hills (80-120 m altitude). The clay deposits are thick at the upper slope where sandstones and sandy-clay overlying clay layers, and thin at the middle and lower slopes where weathered clays overlying clay layers. Clayey materials identified are grey, dark-grey and mottled in color, with sandy-clay, clayey-silt, silty-clay and clay textures. Raw materials are mostly made up of fine particles ranging from 52 to 82% clay and silt in the mottled clayey material, 50 to 82% clay and silt in the dark-grey clayey material and 70 to 85% in the grey clayey material. Their chemical composition is characterized by silica (clay minerals are disorganized and poorly crystallized kaolinite and few smectite. The physical, mineralogical and geochemical properties of these materials presented and discussed in this work show that the clayey raw materials of the Bomkoul area have a good potential for pottery as well as brick, tile and soil sandstone manufacture.