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Sample records for arroz oryza sativa

  1. ESTUDOS NUTRICIONAIS COM ARROZ (Oryza sativa, L.

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    Alfredo LAM-SÁNCHEZ

    2009-07-01

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    RESUMO: Estudos com arroz (Oryza sativa, L. foram realizados a fim de determinar a variabilidade do teor de proteína em coleções de cultivares e a possibilidade de utilizar as camadas periféricas do grão na alimentação humana. Foram analisadas 626 linhagens e cultivares de arroz que mostraram uma variação quanto ao teor de proteína de 4.00 a 14.31 g/100 g de amostra. Para se extrair as camadas periféricas do grão, foi desenvolvida uma máquina experimental, que removia as camadas superficiais dos grãos de arroz integral (inteiros somente com a casca removida. Verificou-se que a quantidade de proteína do grão diminui de fora para dentro. O resíduo, que era constituído de grande parte de restos de endosperma com um teor protéico menor mas incluía o embrião, que é a primeira estrutura a se deslocar de grão no beneficiamento e contém proteínas, vitaminas, sais minerais e lípides, tinha um bom valor nutritivo. Desenvolveu-se também uma fórmula para alimentação infantil a partir da mistura de leite de vaca com arroz, com composição semelhante à do leite materno, a ser utilizada sob a forma de bebida ou mingau. Formulações com 40%-20% arroz + 60%-80% leite de vaca proporcionaram valores de Coeficiente de Eficiência Protéica (2,39 e 2,38, respectivamente que não diferiam estatisticamente do valor de 2,43 obtido na fórmula com 100% de leite de vaca. Seus preços foram 59% e 65% do obtido para o leite de vaca integral. PALAVRAS-CHAVE: Arroz; qualidade do grão; proteína; camadas periféricas; misturas arroz-leite; nutrição humana.

  2. arroz rojo (Oryza sativa L. en dos sistemas de labranza

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    Steven Brenes Prendas

    2006-01-01

    Full Text Available A lo largo de cuatro ciclos de cultivo de arroz anegado, entre los años 2003 y 2004, en la Hacienda El Pelón de la Bajura, Liberia, Guanacaste, Costa Rica, se determinó la distribución espacial de las poblaciones de arroz rojo en los sistemas de Siembra Directa sobre Rastrojos (SDR y en Labranza Mecanizada Convencional (LMC. Mediante levantamientos de malezas ubicados en puntos fijos a nivel de campo y con ayuda del programa Surfer, se logró construir mapas georeferenciales de dichas poblaciones. El sistema SDR logró disminuir el ritmo de crecimiento de las poblaciones, facilitando su manejo, por lo contrario el sistema LMC, favoreció: la distribución, el aumento y la densidad de las poblaciones de arroz rojo en el campo. Los mapas de georeferencia facilitarían la toma de decisiones en el manejo integrado del arroz rojo

  3. Aislamiento y caracterización del gen de la transglutaminasa de arroz (Oryza sativa)

    OpenAIRE

    2013-01-01

    En esta tesis se describen los resultados obtenidos en la clonación y caracterización de una nueva transglutaminasa (TGasa) vegetal aislada en arroz (Oryza sativa), la segunda transglutaminasa clonada en plantas y la primera en plantas C3. Las TGasas (E.C.2.3.2.13) son una familia de enzimas que promueven modificaciones postraduccionales de proteínas. Tienen especial importancia debido a sus implicaciones en enfermedades humanas y a sus aplicaciones biotecnológicas de interés industrial....

  4. Control químico del arroz rojo (oryza sativa l. en arroz, con herbicidas no selectivos-protectantes a la semilla

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    Valent\\u00EDn A. Esqueda

    2000-01-01

    Full Text Available Control químico del arroz rojo (Oryza sativa L. en arroz, con herbicidas no selectivos-protectantes a la semilla. Se establecieron tres ensayos en invernadero con el objetivo de evaluar el efecto protectivo del tratamiento a la semilla de arroz Milagro Filipino (MF con anhídrido naftálico (0,5 y 0,75%, flurazole (0,1 y 0,2% y oxabetrinil (0,1 y 0,2% en comparación con herbicidas no selectivos para arroz [atrazina (1,8 kg/ha, atrazina/metolaclor (0,78/0,75 kg- /ha, acetoclor (2,1 kg/ha, alaclor (2,5 kg/ha y metolaclor (1,92 kg/ha]. Asimismo se determinó el efecto del alaclor en cuatro biotipos de arroz rojo y del arroz MF tratado con anhídrido naftálico. El flurazole y el oxabetrinil no protegieron al arroz de ninguno de los herbicidas, sólo se observó un efecto protectivo del anhídrido naftálico (0,75% al herbicida alaclor (2,5 kg/ha. Alaclor (2 kg/ha redujo temporalmente la altura de las plántulas de arroz, pero a partir de los 25 DDA no existió diferencia en altura con las plantas testigo. El peso seco de las plantas testigo de arroz MF fue estadísticamente semejante al obtenido de las plantas provenientes de semillas tratadas con anhídrido naftálico (0,75% y con aplicación de 1, 1,5 y 2 kg/ha de alaclor. A los 7 DDA, el control de los diferentes biotipos de arroz rojo varió de 40 a 80% con alaclor a 1 kg/ha, de 80 a 98% con 1,5 kg/ha y de 98 a 99% con 2 kg- /ha. A su vez, a los 25 DDA, los controles variaron de 30 a 62% con alaclor a 1 kg/ha, de 43 a 83% con 1,5 kg/ha y de 58 a 96% con 2 kg/ha

  5. Efectos de dos sistemas de labranza sobre poblaciones de arroz rojo (Oryza sativa L. en un agroecosistema arrocero inundado

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    Yemel M. Ortega

    2005-01-01

    Full Text Available Efectos de dos sistemas de labranza sobre poblacionesde arroz rojo (Oryza sativaL. en un agroecosistema arrocero inundado. Se evaluó la influencia de dos sistemas de labranza sobre poblaciones de arroz rojo (Oryza sativaL. y deotras malezas frecuentes en agroecosistemas arroceros durante cuatro ciclos consecutivos de cultivo comercial de arrozinundado. Para estimar el tamaño del banco de semillas se tomaron muestras de suelo a tres profundidades (0 a 5, 5 -20 y20 - 40 cm al inicio de cada ciclo de cultivo. También se estimó la densidad de las malezas más abundantes emergidasdentro del área en cultivo. En ambos casos, hubo diferenciassignificativas entre los sistemas de siembra evaluados. Mien-tras que el banco de semillas de arroz rojo y sus poblacionesemergidas en el campo presentaron tendencias crecientes enlabranza mecanizada convencional (LMC, se observó una reducción progresiva en el tamaño del banco y menor densidad,a medida que transcurrieron ciclos sin labranza en siembradirecta sobre rastrojos (SDR. Las poblaciones de ciperáceasanuales como Cyperusspp. y Fimbristylismilliaceaeincrementaron en ambos sistemas de siembra, pero con mayor intensidad en LMC. La distribución vertical del banco de semillas de malezas en el suelo también fue diferente entre sistemasde siembra. En SDR más del 66% del banco de semillas dearroz rojo y el 82% de las semillas que germinaron se encontraron en los primeros cinco cm del perfil del suelo. Los resultados pemitieron concluir que el sistema SDR promueve condiciones propicias para mantener control en las poblaciones dearroz rojo y de otras malezas en el cultivo de arroz inundado

  6. Efecto de la cobertura de rastrojos en la germinación del arroz (Oryza sativa L. y principales malezas asociadas

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    Yemel M. Ortega

    2005-01-01

    Full Text Available Efecto de la cobertura de rastrojos en la germinacióndel arroz (Oryza sativaL. y principales malezas asociadas. Para determinar el grado de interferencia causado por distintas cantidades de rastrojos de arroz (Oryza sativaL. sobrela emergencia de arroz y malezas asociadas al cultivo, en el2003 se realizaron tres experimentos simultáneos en la hacienda el Pelón de la Bajura, Guanacaste, Costa Rica. Se aplicaron nueve tratamientos (0 a 9 t/ha de coberturas con rastrojosde la variedad de arroz CR 1113 para medir los efectos en laemergencia del arroz y malezas. Las malezas asociadas incluyen las más frecuentes en agroecosistemas arroceros inundados: Oryza sativa, Echinochloa colona, Cyperusspp., Fim-bristylisspp., Ludwigiaspp. y Heteranthera limosa. En losprimeros dos experimentos se determinaron relaciones inversas entre el grado de cobertura y la densidad de plántulas demalezas emergidas (R2>0,89, y entre el grado de cobertura yel porcentaje de germinación del arroz (R2=0,86, respectivamente. Usando coberturas con rastrojos de frijol (Phaseolusvulgaris en el tercer experimento, no se observó efecto supresor en la germinación del arroz, probablemente debido a supronta descomposición. Aunque la germinación del arroz nose afectó aún a las intensidades más altas de rastrojos evaluadas, conviene realizar pruebas similares a largo plazo para determinar posibles efectos debidos a la descomposición de residuos, alelopatía y acarreo de herbicidas después de variosciclos consecutivos del cultivo de arroz.

  7. Actividad Alelopática de las Arvenses Asociadas al Cultivo de Arroz (Oryza sativa L. en el Tolima-Colombia Allelophatic Activity of Arvenses Associated with the Cultivation of Rice (Oryza sativa l. in Tolima-Colombia

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    Elizabeth Murillo

    2006-01-01

    Full Text Available Se recolectaron e identificaron especies de arvense de la familia Asteraceae asociadas al cultivo de arroz (Oryza sativa L. en el Tolima-Colombia, y se caracterizaron morfológica, bromatológica y farmacognósticamente. Las fracciones orgánicas de la arvense con mayor contenido de sesquiterpenlactonas se evaluó por su actividad alelopática sobre la germinación y elongación de la radícula de semillas de O. sativa, colocadas en papel filtro a concentraciones de 200, 400 y 600 ppm e incubadas durante 120 horas. El cultivo de la gramínea se encontró asociado a 12 especies invasoras que presentaron gran variabilidad en sus características morfológicas y en los índices farmacognósticos. Las fracciones clorofórmicas mostraron diferencias significativas con el extracto etanólico crudo por el efecto sobre la división celular y el crecimiento radicular de semillas de O. sativa, actividad que parece estar asociada al contenido de sesquiterpenlactonas.Asteraceae weed species associated with rice (Oryza sativa L. in the state of Tolima-Colombia were gathered, identified and morphologic, pharmacognostic and bromatologically characterized. Allelopathic activity for those organic fractions of weed with high content of sesquiterpene lactone was evaluated on the germination and radicle length of O. sativa seeds in filter paper. Both crude extract and chromatographic fractions were incubated for 120 hours at concentrations of 200, 400 and 600 ppm. Cultivation of the grainswas associated to 12 weed species which presented great variability in its morphologic characteristics and farmacognostic index. Chloroformic fractions gave significant differences with the ethanolic extract due to the effect on the cellular division and the radicle elongation of the O. sativa seeds, activity that seems to be associated to the content of sesquiterpene lactone.

  8. Adaptación del arroz riego (Oryza sativa L. en el Caribe colombiano

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    Hermes Aramendiz Tatis

    2011-01-01

    Full Text Available En Colombia, el arroz ocupa el primer lugar en seguridad alimentaria, valor económico y generación de empleo entre los cultivos anuales, siendo el sistema bajo riego más importante. El objetivo fue determinar el progreso, estabilidad y adaptabilidad del rendimiento de arroz bajo riego, en cinco departamentos del caribe colombiano. Se utilizaron datos del Ministerio de Agricultura y Desarrollo Rural, correspondiente a los Departamentos de Córdoba, Bolívar, Magdalena, Cesar y Guajira, durante el periodo 1987-2008. La estimación del progreso del rendimiento se realizó a través del análisis de regresión lineal entre los años (variable explicativa y el rendimiento de grano (variable explicada. La estabilidad se determinó a través del coeficiente de variación para tres períodos consecutivos de cinco años y el último de siete. La adaptabilidad, se realizó con el coeficiente de regresión lineal (bi. Los resultados destacan que el progreso en el rendimiento de grano en el Caribe colombiano, osciló entre 1.15% y 3.36% por año y 52.2 y 168.1 kg.ha-1, especialmente en el Departamento de Bolívar (3.36% por año y 168.1 kg.ha-1. La estabilidad, resultó en general alta (CV4.57 para el rendimiento de grano.

  9. Adaptación del arroz riego (Oryza sativa L. en el Caribe

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    Aramendiz Tatis Hermes

    2011-03-01

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    En Colombia, el  arroz ocupa el primer lugar en seguridad alimentaria, valor económico y generación de empleo entre los cultivos anuales, siendo el sistema bajo riego mãs importante. El objetivo fue determinar el progreso, estabilidad y adaptabilidad del rendimiento de arroz bajo riego, en cinco departamentos del caribe colombiano. Se utilizaron datos del Ministerio de Agricultura y Desarrollo Rural, correspondiente a los Departamentos de Córdoba, Bolívar, Magdalena,  Cesar y Guajira,  durante el periodo 1987-2008.  La estimación  del progreso del rendimiento se realizó a través del análisis de regresión lineal entre los años (variable explicativa y el rendimiento de grano (variable explicada. La estabilidad se determinó a través del coeficiente de variación para tres periodos consecutivos de cinco años y el último de siete. La adaptabilidad, se realizó con el coeficiente de regresión lineal (bi. Los resultados destacan que  el  progreso  en  el  rendimiento  de  grano  en  el  Caribe  colombiano,  osciló  entre  1.15%  y

    3.36% por año y 52.2 y 168.1 kg.ha-1, especialmente en el Departamento de Bolivar (3.36% por año y 168.1 kg.ha-1. La estabilidad, resultó en general alta (CV<15.56% y se incrementó con los años. Los cinco departamentos, presentaron adaptabilidad general (bi>4.57 para el rendimiento de grano.

  10. Toxicidad del herbicida nicosulfurón en arroz (Oryza sativa L.

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    Valent\\u00EDn A. Esqueda

    2000-01-01

    Full Text Available Se determinaron los efectos fitotóxicos del herbicida nicosulfurón al arroz cv. Milagro Filipino Depurado en condiciones de invernadero. Se evaluaron dos dosis de nicosulfurón (40 y 80 g/ha y la mezcla de nicosulfurón + 2,4-D (40 + 480 g/ha y se incluyó un testigo sin herbicida. Los tratamientos se aplicaron a plantas de 3, 10, 17 y 24 días de emergidas (DDE. La toxicidad fue evaluada a los siete días de la aplicación (DDA y se midió la altura de las plantas a los siete, 15 y 30 DDA. En esta última fecha también se estimó el rendimiento de materia seca. La mayor toxicidad fue ocasionada por la dosis de 80 g de nicosulfurón o la de 40 g en mezcla con 2,4-D, en plantas aplicadas a los tres y 10 DDE. A los siete y 15 DDA, la altura del arroz aplicado con cualquiera de los tratamientos herbicidas fue significativamente menor a la de las plantas testigo. A los 30 DDA, las plantas testigo todavía eran significativamente mayores que las plantas tratadas, a excepción de aquellas tratadas a los tres DDE con 40 g de nicosulfurón o con la mezcla de nicosulfurón + 2,4-D, a los 10 DDE. Las plantas aplicadas con 40 g de nicosulfurón a los 10 DDE o después, tuvieron un peso seco estadísticamente semejante al de las plantas testigo, mientras que las plantas tratadas con 80 g de nicosulfurón fueron las que produjeron menor materia seca

  11. AVALIAÇÃO DE RESISTÊNCIA EM VARIEDADES DE ARROZ (Oryza sativa L. AO ATAQUE DO Sitophilus oryzae LINNAEUS, 1763 (COLEOPTERA: CURCULIONIDAE

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    SOUSA, Joseane Rodrigues

    2010-04-01

    Full Text Available The resistance of rice varieties to the attack of Sitophilus oryzae Linnaeus, 1763 (Coleoptera: Curculionidae was evaluated in an experiment conducted in the laboratory of the Universidade Estadual do Maranhão, in a randomized completely design with 19 treatments in six replications. The varieties used in this study were from field experiment conducted in Miranda do Norte, MA between the months of january to may 2006. We evaluated the emerged insects total at 35 and 60 days after harvest and at 35 days was determined thepercentage of grains with defects in the skin. The results showed that the varieties Nenenzinho and Branco Tardão were, respectively, in the two storage periods (35 and 60 days after harvest the most resistant to attack by S. oryzae as the variety Branco Tardão was the most susceptible in both storage of periods.A resistência de variedades de arroz ao ataque do Sitophilus oryzae, Linnaeus, 1763 (Coleoptera: Curculionidae foi avaliada em experimento conduzido em laboratório na Universidade Estadual do Maranhão, em delineamento experimental inteiramente casualizado com 19 tratamentos em seis repetições. As variedades utilizadas nesta pesquisa foram provenientes de experimento conduzido em campo no município de Miranda do Norte, MA entre os meses de janeiro a maio de 2006. Foram avaliados o total de insetos emergidos aos 35 e 60dias após a colheita e aos 35 dias foi determinado o percentual de grãos com defeitos na casca. Os resultados evidenciaram que as variedades Agulha e Nenenzinho foram, respectivamente, nos dois períodos de armazenamento (35 e 60 dias após a colheita as mais resistentes ao ataque de S. oryzae enquanto a variedade Branco Tardão foi a mais suscetível nos dois períodos de armazenamento.

  12. Inducing defence enzymes in two rice (Oryza sativa varieties by G. mosseae arbuscular mycorrhizal fungus Inducción de enzimas de defensa en dos variedades de arroz (Oryza sativa por el hongo micorrízico arbuscular G. mosseae

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    Fernández Félix

    2006-12-01

    Full Text Available Protecting plants against fundamentally radical pathogens is one of arbuscular mycorrhizal fungi's benefits. This work was aimed at comparing the effect of one such fungus (Glomus mosseae on inducing a defensive response in two rice (Oryza sativa varieties (LP-7 and J-104. Peroxidise, polyphenoloxidase, chitinase, (3-1,3 glucanase and phenylalanine ammonium lyase enzymatic activity and peroxidase and polyphenoloxidase isoenzymatic expression were determined in both radical and foliar tissues. Mycorrhizal colonisation and visual density percentage were also evaluated. The results revealed that the G. mosseae fungus caused variations in enzymatic activity. Differences were observed in the two varieties behaviour patterns according to evaluation time and plant área studied. The differences detected in peroxidase and polyphenoloxidase electrophoretic patterns were due to the varieties and not to mycorrhisation effect. Rice variety LP-7 generally presented a successful response to inoculation with the G. mosseae arbuscular mycorrhizal fungus, manifesting higher defence mechanism induction. The best results for protecting crops could thus be obtained by using this combination. Key words: peroxidase, polyphenoloxidase, chitinase, (3-1,3 glucanase and phenylalanine ammonium lyase.Entre los beneficios que los hongos micorrízicos arbusculares proporcionan a las plantas se encuentra la protección contra patógenos, fundamentalmente radicales. Por lo que fue objetivo de este trabajo comparar el efecto de uno de estos hongos, Glomus mosseae, en la inducción de respuestas de defensa en dos variedades de arroz (Oryza sativa, LP-7 y J-104. Para lo cual se determinaron, tanto en tejido radical como foliar, las activida­des enzimáticas de peroxidasa, polifenoloxidasa, quitinasa, (3-1,3 glucanasa y fenilalanina amonio liasa; así como la expresión isoenzimática de peroxidasas y polifenoloxidasas. También se evaluaron los porcentajes de

  13. Efeito da irradiação gama nas características físico-químicas e sensoriais do arroz (Oryza sativa L. e no desenvolvimento de Sitophilus oryzae L. Effect of gamma irradiation on physico-chemical and sensorial characteristics of rice (Oryza sativa L. and on the development of Sitophilus oryzae L.

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    Cíntia Fernanda Pedroso Zanão

    2009-03-01

    Full Text Available A pesquisa teve como objetivo verificar a viabilidade da radiação gama como método de conservação do arroz polido (Oryza sativa L.. As amostras foram irradiadas com doses 0,5; 1,0; 3,0; e 5,0 kGy. Foram realizadas análises da quebra do grão no beneficiamento, da longevidade e reprodução do Sitophilus oryzae L., a composição centesimal, o conteúdo de amilose aparente e propriedades de pasta dos amidos, e análises para cor (instrumental e análise sensorial do arroz cru e cozido. Foi utilizado teste de Tukey (p The objective of this research was to verify the viability of the gamma radiation as polished rice (Oryza sativa L. conservation method. The samples were irradiated with doses of 0.5; 1.0; 3.0; and 5.0 kGy. Analysis of the grain breakage during the enriching process, longevity and reproduction of the Sitophilus oryzae L., centesimal composition, apparent amylose content, starch paste properties, color (instrumental, and the sensorial evaluation of raw and cooked rice were performed. It was verified that the irradiation did not change the percentage of grain breakage during the enrichment process, and it caused a negative effect on the development of insects. The irradiation did not change significantly the centesimal composition and the apparent amylase content. The Tukey test (p < 0.05 was conducted to verify the differences between the treatments. Gamma irradiation affected the pasting properties of the rice flour. Pasting parameters as temperature, peak, final viscosity, and setback values showed decreasing values with irradiation doses. Differences were detected in the sensorial aspect among the samples, and the sample irradiated with the dose of 1.0 kGy presented greater averages. Regarding the instrumental color parameter, it was observed the difference in the values b* indicating that the rice changed the white color for yellowish with the increase in the irradiation dose. The irradiation dose of 1.0 kGy proved the best

  14. RESPUESTA DE PLANTAS DE ARROZ (Oryza sativa L. A LA APLICACIÓN DE DIFERENTES NIVELES DE NaCl. I. CRECIMIENTO Y RELACIONES HÍDRICAS

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    D. Morales

    2006-01-01

    Full Text Available Este trabajo se realizó con el objetivo de determinar la respuesta en el crecimiento y las relaciones hídricas de dos variedades de arroz (Oryza sativa L. al ser expuestas a diferentes niveles de NaCl. Las plantas se desarrollaron en una cámara de crecimiento en condiciones de hidroponía. Las evaluaciones se llevaron a cabo al iniciarse el experimento, a los siete y 14 días de aplicados los tratamientos y después de siete días de recuperación. Las evaluaciones realizadas consistieron en la biomasa expresada como la materia fresca y seca de raíces y la parte aérea, la conductancia estomática, transpiración y los potenciales hídrico foliar, osmótico, de presión y osmótico a plena turgencia. El análisis del comportamiento de las plantas indicó que estas modificaron tanto el crecimiento como las relaciones hídricas al ser expuestas a las condiciones salinas. También se apreció que en estas condiciones las plantas desarrollaron el mecanismo de ajuste osmótico.

  15. Adaptación del arroz riego (Oryza sativa L. en el Caribe colombiano Adaptation of irrigated rice (Oryza sativa L. in the colombian Caribbean

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    Hermes Aramendiz Tatis

    2011-01-01

    Full Text Available En Colombia, el arroz ocupa el primer lugar en seguridad alimentaria, valor económico y generación de empleo entre los cultivos anuales, siendo el sistema bajo riego más importante. El objetivo fue determinar el progreso, estabilidad y adaptabilidad del rendimiento de arroz bajo riego, en cinco departamentos del caribe colombiano. Se utilizaron datos del Ministerio de Agricultura y Desarrollo Rural, correspondiente a los Departamentos de Córdoba, Bolívar, Magdalena, Cesar y Guajira, durante el periodo 1987-2008. La estimación del progreso del rendimiento se realizó a través del análisis de regresión lineal entre los años (variable explicativa y el rendimiento de grano (variable explicada. La estabilidad se determinó a través del coeficiente de variación para tres períodos consecutivos de cinco años y el último de siete. La adaptabilidad, se realizó con el coeficiente de regresión lineal (bi. Los resultados destacan que el progreso en el rendimiento de grano en el Caribe colombiano, osciló entre 1.15% y 3.36% por año y 52.2 y 168.1 kg.ha-1, especialmente en el Departamento de Bolívar (3.36% por año y 168.1 kg.ha-1. La estabilidad, resultó en general alta (CV4.57 para el rendimiento de grano.In Colombia, the rice crop under irrigation system ranks first in food security, economic value and employment offer among annual crops, becoming the most important. The objective of this study was to quantify increasing, stability and adaptability of irrigated rice in five departments of the Colombian Caribbean area. Data from the Ministry of Agriculture and Rural Development for the departments of Cordoba, Bolivar, Magdalena, Cesar and Guajira, during the year period 1987 to 2008 were used. The increasing in yield was determined using the linear regression analysis among years (independent variable and grain yield (dependent variable in each department. The yield stability was determined by the coefficient of variation across of three

  16. Concentración mínima inhibitoria de higromicina B en callos embriogénicos de arroz (Oryza sativa L.

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    Iván Darío Barbosa Cepeda

    2012-06-01

    Full Text Available Título en ingles: Minimum inhibitory concentration of higromycin B in rice embryogenic calli (Oryza sativa L. RESUMEN Uno de los elementos imprescindibles en la ingeniería genética de plantas es un sistema de selección eficiente. El propósito de este trabajo fue evaluar la sensibilidad al marcador de selección higromicina B, de callos embriogénicos obtenidos a partir del escutelo de semilla de tres variedades colombianas de arroz (FEDEARROZ 2000, FEDEARROZ 50 y FEDEARROZ 369. Además, se validó la respuesta de estas variedades al protocolo de regeneración empleado. Se probaron cuatro concentraciones del antibiótico (25 mg/L, 50 mg/L, 75 mg/L y 100 mg/L más un control sin higromicina B. Los resultados obtenidos mostraron que una concentración de 50 mg/L de antibiótico en el medio de regeneración es adecuada para la selección. Con esta concentración se impide la formación de brotes, aunque los callos no mueren completamente. Por otra parte, se estableció que el protocolo de regeneración utilizado es de baja eficiencia y, por consiguiente, es necesario optimizarlo para poder usarlo en procesos de ingeniería genética de cultivares colombianos de arroz.   Palabras clave: variedades colombianas de arroz, FEDEARROZ 2000, FEDEARROZ 50, FEDEARROZ 369, sistema de selección, antibiótico.   ABSTRACT An efficient selection system is one of the most important elements of plant genetic engineering. The purpose of this study was to evaluate the sensitivity of  scutellum-derived embriogenic calli obtained from three colombian rice varieties (FEDEARROZ 2000, FEDEARROZ 50 and FEDEARROZ 369, to the selection marker hygromycin B. Aditionally, the response of these varieties to the regeneration protocol was measured. Four antibiotic concentrations were tested (25 mg/L, 50 mg/L, 75 mg/L and 100 mg/L plus one control without hygromycin B. The results show that 50 mg/L of antibiotic in the regeneration medium is adequate for selection. This

  17. Controle de plantas daninhas na cultura do arroz de sequeiro (Oryza sativa L. Weed control in upland rice (Oryza sativa L.

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    R. Victoria Filho

    1981-06-01

    Full Text Available Com o objetivo de verificar o controle de plantas daninhas com herbicidas na cultura do arroz de sequeiro, foi conduzido o presente experimento em um latossolo roxo, série Jaboticabal com 4,82% de m.o, utilizando-se a variedade Pratão Precoce. Foram util izados os seguintes tratamentos com as respectivas doses em kg do i.a/ha: pendimethalin a 0,75, 1,00 e 1,50; AC-92390 a 1,00, 2,00 e 3,00; butachlor a 2,05; benthiocarb a 4,50; oxadiazon a 1,0 todos em pré emergência; e propanil a 4,32; propanil + 2,4-D amina a 2,88 + 0,36 e propanil + parathion metílico a 1,98 + 0,24, em pósemergência aos 29 dias após o plantio. As plantas daninhas que ocorreram em maior densidade foram: carrapicho-de-carneiro (Acanthospermum hispidum D.C. , trapoe raba (Commelina sp., falsa-dormideira (Cassia patellaria D.C., anileira (Indigofera hirsuta L., capimcarrapicho (Cenchrus echinatus L., beldroega (Portulacca oleracea L. e guanxuma (Sida sp.. O carrapicho-de-carneiro só foi controlado pelos tratamentos em pós -emergência; a falsa-dormideira pelo butachlor e pelos tratamentos em pós-emergência. No controle geral os melhores indices foram obtidos com os tratamentos em pós-emergência. Os tratamentos em pré-emergência foram capinados aos 36 dias após o pl antio devido ao baixo controle do carrapicho-de-carneiro, e os de pós-emergência aos 54 di as devid o ao baixo controle da trapoeraba. Quanto à fitotoxicidade à cultura o tratamento propanil + parathion metflico atingiu fitotoxicidade quase forte (nota 5,8 pela escala E.W.R.C., todavia não houve diferença significativa entre os diferentes tratamentos com herbicida na produção de grãos.A field trial was performed, on a oxisol (Latos - solic B containing 4.82% organic matter, with the objetive to verify the weed control with pre and postemergence herbicides in upland rice cv "Pratão Precoce". The following treatments were used (kg a.i/ha : pendimethal in at 0,75, 1,00 and 1,50; AC-92390 at 1

  18. Aislamiento e identificación de Bacillus cereus a partir de dos variantes de arroz comercial (Oryza sativa L.

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    Irasema Pérez-Portuondo

    2011-01-01

    Full Text Available Bacillus cereus es una bacteria habitante común del suelo, de importancia tanto para la salud pública como para la Biotecnología. Con el objetivo de aislar ejemplares de esta bacteria para su utilización en estudios posteriores, así como de evaluar su permanencia en el arroz cocido, se desarrolló el protocolo propuesto por Kramer y cols. (1982. Con este fin, se tomaron muestras de arroz en grano con cáscara y de arroz cocido y se buscaron bacterias con propiedades hemolíticas y lecitinasa positiva. La identificación de los aislados se realizó mediante pruebas morfológicas y bioquímicas. Se obtuvieron 14 aislados, ocho de los cuales reunían las características distintivas de B. cereus, comparados con B. cereus ATCC 11778, incluida la resistencia a antibióticos. No se observó presencia de cuerpos parasporales típica de B. thuringiensis. Se comprobó que en el arroz cocido, transcurridas ocho horas de la cocción, pueden aislarse bacterias hemolíticas y lecitinasa positivas, en mayor número si este es conservado a temperatura ambiente, lo que convierte este alimento en potencialmente peligroso para su consumo. Estos resultados sugieren también la posibilidad de emplear al arroz como fuente para aislamiento de B. cereus.

  19. Perspectivas del uso de bacterias rizosféricas en el control de pyricularia grisea (cooke sacc.) en el cultivo del arroz (oryza sativa l.)

    OpenAIRE

    Acebo Guerrero, Yanelis; Hernández-Rodríguez, Annia; Rives Rodríguez, Narovis; Hernández-Lauzardo, Ana Niurka

    2011-01-01

    Prospect of the use of bacteria in the control Pyricularia grisea (Cooke Sacc.) on rice (Oriza sativa L.) Título corto: Bacterias rizosféricas para controlar la piriculariosis ResumenEl arroz es fuente de alimento para una gran parte de la población mundial, con alto promedio de consumo anual. En este cultivo las enfermedades de origen microbiano constituyen uno de los factores que inciden en la obtención de bajos rendimientos y calidad de los granos. La piriculariosis o añublo del arroz, cau...

  20. Perspectivas del uso de bacterias rizosféricas en el control de Pyricularia grisea (Cooke Sacc.) en el cultivo del arroz (Oryza sativa L.)

    OpenAIRE

    Yanelis Acebo Guerrero; Annia Hernández-Rodríguez; Narovis Rives Rodríguez; Ana Niurka Hernández-Lauzardo

    2011-01-01

    Prospect of the use of bacteria in the control Pyricularia grisea (Cooke Sacc.) on rice (Oriza sativa L.) Título corto: Bacterias rizosféricas para controlar la piriculariosis ResumenEl arroz es fuente de alimento para una gran parte de la población mundial, con alto promedio de consumo anual. En este cultivo las enfermedades de origen microbiano constituyen uno de los factores que inciden en la obtención de bajos rendimientos y calidad de los granos. La piriculariosis o añublo del arroz, cau...

  1. Simbiosis de micorrizas arbusculares en plantas de arroz (Oryza sativa L. en condiciones de inundación y secano

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    Michel Ruiz Sánchez

    2015-07-01

    Full Text Available En la Unidad Científico Tecnológica de Base Los Palacios, Cuba, a 22° 34’ 32.73” N y 83° 14’ 11.95” O, se evaluó el efecto de la inundación sobre la colonización de hongos micorrízicos arbusculares durante la fase vegetativa de plantas de arroz cultivar INCA LP-5. Se realizaron dos experimentos en condiciones de invernadero en macetas con una capacidad de 800 g de suelo, ambos experimentos en un diseño experimental completamente aleatorizado. Uno de ellos se realizó con Rhizophagus (=Glomus intraradices (Ri, donde se evaluó la dinámica de colonización de la simbiosis micorrízica en condiciones de inundación y secano (no inundadas. En el segundo experimento se trabajó con Glomus cubense (Gc y se evaluó la colonización micorrízica en plantas de arroz cultivadas con diferentes alturas de lámina de agua. En ambos experimentos se evaluaron altura de la planta, producción de masa seca y tasa absoluta de crecimiento. Como resultado se encontró que las plantas de arroz fueron colonizadas a partir del día 35 después de la germinación, tanto en condiciones inundadas como no inundadas, con una tendencia al incremento en el tiempo. Se comprobó que la colonización micorrízica disminuyó en condiciones de inundación y a medida que la altura de la lámina de agua fue superior se encontraron valores inferiores de este indicador. La colonización micorrízica incrementó el desarrollo de las plantas de arroz

  2. ALTERACIONES CELULARES INDUCIDAS POR EL IÓN AL 3+ EN DOS VARIEDADES CUBANAS DE ARROZ (Oryza sativa L.

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    Idioleidys Alvarez

    2005-01-01

    Full Text Available Con el propósito de estudiar las modificaciones, que a nivel celular provoca el aluminio en el sistema radicular del arroz, se desarrolló un experimento, en el cual se emplearon diferentes dosis de AlCl3 para imponer la condición de estrés. Para el estudio los ápices radicales de las plántulas se procesaron por un método de disminución progresiva de la temperatura (PLT y se incluyeron en resina Lowicryl para su posterior seccionamiento y observación al microscopio de Contraste de Fase. Se apreciaron cambios en la orientación del crecimiento de células epidérmicas y corticales, lo cual contribuyó a la inhibición del alargamiento celular. Las paredes de algunas células se observaron engrosadas e irregulares y se evidenció un incremento en el tamaño de las vacuolas, fenómeno observado también en otras plantas ante la exposición con aluminio. Los resultados obtenidos demuestran que el aluminio provoca alteraciones en las células radicales del arroz, algunas de las cuales son responsables estructuralmente de cambios morfológicos como el engrosamiento y acortamiento de las raíces, hallados con anterioridad en nuestro laboratorio para el cultivo del arroz ante este estrés.

  3. INFLUENCIA DE LAS TECNOLOGÍAS DE PREPARACIÓN DE SUELO CUANDO SE CULTIVA ARROZ (Oryza sativa L.

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    M. Ruiz

    2005-01-01

    Full Text Available El efecto, que sobre el suelo provocan las diferentes tecnologías que se utilizado para su preparación, cuando se cultiva arroz, es discutido y analizado por todos aquellos que se dedican a su explotación e investigación agrícola, debido a que inciden directamente sobre sus propiedades físicoquímicas y biológicas, así como en los procesos que dan lugar al crecimiento y desarrollo de las plantas. La alta demanda de la mecanización que tienen todas las tecnologías de preparación de suelos conduce a la degradación del agroecosistema arrocero, por lo que sí no se toman las medidas oportunas, las áreas dedicadas al cultivo del arroz pronto se convertirán en improductivas. El presente trabajo pretende reunir en un solo texto coherentemente estructurado, parte de la información que al respecto se ha elaborado en Cuba y el mundo.

  4. COMPORTAMIENTO DE VARIEDADES COMERCIALES DE ARROZ (Oryza sativa L. EN CUATRO GRANJAS DEL COMPLEJO AGROINDUSTRIAL ARROCERO LOS PALACIOS

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    R. Morejón

    2005-01-01

    Full Text Available El estudio se desarrolló en las granjas Sierra Maestra, Cubanacán, Agrícola Vueltabajo y Caribe, pertenecientes al complejo agroindustrial arrocero Los Palacios de la provincia de Pinar del Río, donde se evaluaron cuatro variedades comerciales de arroz (J-104, Reforma, INCA LP-5 e IAC-25, con el objetivo de analizar el comportamiento de estas en condiciones diferentes de fertilidad, durante dos campañas correspondientes a la época de frío 2001-2002 y 2002-2003. La matriz de datos obtenida [(granja-genotipo-campaña x variables] fue procesada mediante diferentes técnicas multivariadas. Del análisis realizado se concluyó que en la granja Cubanacán, las cuatro variedades tuvieron un buen comportamiento en cuanto a los caracteres estudiados y en Caribe, la variedad Reforma no alcanzó los mejores resultados. La variedad INCA LP-5 tuvo una buena respuesta, independientemente del lugar donde se sembró; IAC-25 mostró valores elevados de granos llenos por panícula y peso de 1 000 granos, así como la menor cantidad de granos vanos por panícula cuando fue sembrada en Agrícola Vueltabajo y J-104 apareció siempre en las mejores clases, aunque fue beneficiada en cuanto a la fecha de siembra.

  5. Regeneração in vitro de anteras de arroz irrigado (Oryza sativa L. e mapeamento de QTL associado

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    Lannes Sérgio Dias

    2004-01-01

    Full Text Available A baixa taxa de regeneração in vitro de alguns cultivares de arroz da subespécie indica limita a utilização de técnicas de cultura de anteras como ferramenta para o desenvolvimento de novos cultivares. A identificação de regiões genômicas associadas à formação de calos e regeneração de plantas, a partir do cultivo de anteras, poderá permitir a transferência do caráter por seleção assistida. Duas populações de retrocruzamento foram utilizadas para o mapeamento genético e estudo destes caracteres, sendo Taipei 309// BRS 7 "Taim"/Taipei 309 (53 genótipos e BRS 7 "Taim"// BRS 7 "Taim"/Taipei 309 (74 genótipos. Duzentas anteras imaturas de cada genótipo utilizado no estudo foram inoculadas em meio NL líquido e, após 40 dias, os calos formados foram transferidos para o meio MS sólido para regeneração de plantas. Todas as plantas doadoras de anteras foram usadas na extração de DNA genômico e sete primers RAPD foram utilizados na geração de marcadores para a construção dos mapas de ligação dos retrocruzamentos estudados. A taxa de formação de calos variou de 2,27 a 3,36% e a taxa de regeneração de plantas 1,38 a 1,82%, não se diferenciando significativamente. Seis grupos de ligação foram obtidos, três em cada população. Um QTL com LOD 3,10 foi detectado para o caráter formação de calos na população Taipei 309 // BRS 7 "Taim" / Taipei 309. Nenhum QTL foi detectado para a característica regeneração de plantas.

  6. COMPORTAMIENTO DE NUEVOS GENOTIPOS DE ARROZ (Oryza sativa L. OBTENIDOS MEDIANTE CULTIVO DE ANTERAS PARA CONDICIONES DE BAJO SUMINISTRO DE AGUA

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    Elizabeth Cristo

    2006-01-01

    Full Text Available En la Estación Experimental del Arroz ¿Los Palacios¿, perteneciente al Instituto Nacional de Ciencias Agrícolas, durante los períodos poco lluvioso (frío del 2002 y lluvioso (primavera del 2003, se estudió el comportamiento de genotipos de arroz obtenidos mediante el cultivo de anteras, así como un grupo de mutantes y somaclones en condiciones de bajo suministro de agua: los genotipos 8734 y 8735 (obtenidos a través del cultivo de anteras, 8551, 8552, 8553, IAC-27 (mutaciones, 8733, INCA LP-9 (cultivo somático y como testigo de producción la variedad comercial Perla de Cuba. Para provocar las condiciones de bajo suministro de agua, se empleó el siguiente manejo: se estableció la lámina de agua a los 15 días de germinado el arroz, suspendiendo la entrada de agua a los 35 días después de germinado (DDG, reponiéndosela nuevamente en el cambio de primordio hasta después del 50 % de floración. Al momento de la cosecha se evaluaron la altura final, el ciclo del cultivo, rendimientos agrícola (t.ha-1 e industrial (% de granos enteros, así como la resistencia al acame, desgrane, Piriculariosis, manchado del grano, Sarocladium oryzae y al borer. Se encontró que el genotipo 8735 obtenido a partir del cultivo de anteras mostró excelente comportamiento en cuanto a los rendimientos agrícola e industrial, así como a las principales enfermedades que afectan económicamente a este cultivo, como es el caso del manchado del grano.

  7. Desempenho de populações híbridas F2 de arroz-vermelho (Oryza sativa com arroz transgênico (O. sativa resistente ao herbicida amonio-glufosinate Performance of F2 hybrid populations of red rice (Oryza sativa with ammonium-glufosinate-resistant transgenic rice (O. sativa

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    J.A. Noldin

    2004-09-01

    Full Text Available O arroz-vermelho e o arroz-preto constituem-se nas principais plantas daninhas infestantes da cultura de arroz irrigado, devido à dificuldade de controle seletivo desta espécie em lavouras comerciais. A utilização de cultivares geneticamente modificados resistentes a herbicidas não-seletivos constitui uma alternativa de controle do arroz-vermelho e arroz-preto em arroz irrigado. O objetivo deste trabalho foi avaliar o comportamento de populações híbridas F2 originárias do cruzamento entre o arroz transgênico resistente ao herbicida glufosinato de amônio (arroz GM e o arroz-vermelho ou arroz-preto. As populações híbridas F2 resultantes do cruzamento entre o arroz transgênico e o arroz-vermelho e preto são viáveis, mas não apresentam vantagem competitiva aparente em comparação com o arroz-vermelho e arroz-preto não-hibridizado, respectivamente. Nas populações híbridas F2, as características morfológicas, como capacidade de perfilhamento, número de folhas produzidas e estatura média das plantas, foram em parte reduzidas e em parte não foram afetadas pela introgressão do gene BAR. A duração média do período entre o transplante e 50% da fase de floração aumentou nos híbridos F2 entre arroz-vermelho e arroz GM, comparado com os parentais arroz-vermelho e arroz GM. Nos híbridos com arroz-preto, observou-se o contrário: as plantas reduziram o ciclo médio em relação a este. O degrane natural médio observado nos quatro cruzamentos foi inferior ao apresentado pelos dois parentais (arroz-vermelho e arroz-preto-aspecto este também desfavorável à persistência do arroz-vermelho no ambiente. A esterilidade média de espiguetas aumentou e a produção de sementes viáveis foi inferior ou no máximo similar àquela observada no arroz-vermelho e no arroz-preto. A dormência de sementes foi pouco afetada, quando comparadas as populações híbridas F2 portadoras do gene BAR com os parentais arroz-vermelho e arroz

  8. Zinco, chumbo e cádmio em plantas de arroz (Oryza Sativa L. cultivadas em solo após adição de resíduo siderúrgico Zinc, lead and cadmium influence in rice plants (Oryza Sativa L. cultivated in soil with addition of siderurgical residue

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    André Fernão Martins de Andrade

    2008-10-01

    Full Text Available Os efeitos da aplicação de resíduo siderúrgico, proveniente da concentração de zinco em lama de altos-fornos siderúrgicos, como fonte de zinco para plantas de arroz (Oryza Sativa L. BRS Curinga e a toxicidade devida ao cádmio e ao chumbo no resíduo, foram estudados em experimento de casa de vegetação. O material de solo usado foi proveniente do horizonte A e B de um Latossolo Vermelho-Amarelo e do horizonte A de um Neossolo Flúvico, coletados no município de Pinheiral, Estado do Rio de Janeiro. Foram aplicadas quatro doses de resíduo (94; 281; 844 e 2531kg ha-1. Foi determinado o teor de zinco, cádmio e chumbo na raiz e na parte aérea das plantas de arroz. As plantas crescidas no horizonte A do Neossolo Flúvico apresentaram a maior produção de matéria seca e a maior acumulação de zinco e a menor de cádmio. As plantas de arroz desenvolvidas no horizonte B do Latossolo apresentaram a menor produção de matéria seca, menor acumulação de zinco e a maior de chumbo, enquanto que as cultivadas no horizonte A do Latossolo apresentaram a mais elevada produção de matéria seca dos três substratos utilizados. O zinco e o chumbo concentraram-se, principalmente, nas raízes das plantas, e o cádmio se concentrou na parte aérea. Pelas características apresentadas nos solos estudados e pelas concentrações fitotóxicas do chumbo e do cádmio encontradas nas plantas desenvolvidas sobre o horizonte B do Latossolo, não é recomendável a utilização desse resíduo como fonte de zinco para a cultura do arroz.The effects of application of siderurgical residue, originated from the zinc concentration in siderurgical high-ovens mud, as supply of zinc for rice plants (Oryza Sativa L. and the toxicity due to cadmium and lead from the residue, were studied in a greenhouse experiment.The period of the experiment was from April of 2005 to March of 2006. The soil materials were from the A and B horizons of a Yellow - Red Oxisol, and the A

  9. Refino de óleo de farelo de arroz (Oryza sativa L. em condições brandas para preservação do γ-orizanol Refining of rice bran oil (Oryza sativa L. to preserve γ-orizanol

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    Luz Maria Paucar-Menacho

    2007-08-01

    Full Text Available O γ-orizanol é um antioxidante presente no óleo de farelo de arroz, mas ausente em outros óleos vegetais, ao qual têm sido atribuídos efeitos antioxidante e hipocolesterolêmico. O conteúdo de γ-orizanol no óleo de farelo de arroz bruto varia entre 1-2%, mas durante a etapa de neutralização do refino químico, este composto fica retido na borra. O presente trabalho teve por objetivo propor uma técnica alternativa de refino físico em condições brandas para o óleo de farelo de arroz com a finalidade de preservar o γ-orizanol. Utilizou-se farelo de arroz inativado e extrusado obtido a partir do processo de produção do arroz parboilizado, sendo o óleo bruto (Oryza sativa extraído pelo método de expeller. O processo de refino do óleo bruto consistiu nas etapas de degomagem ácida (com H3PO4 85%, centrifugação, clarificação, desodorização a 180 ºC e winterização. Foram realizadas análises para caracterização e comparação do óleo bruto e refinado, seguindo metodologias oficiais da AOCS. Concluiu-se que o processo de refino físico preservou 97% do γ-orizanol, o qual potencializou a estabilidade oxidativa do óleo refinado pelo método alternativo, que apresentou uma melhoria de 33% (13,3 horas a 110 ºC do período de indução da oxidação em relação ao óleo comercial.γ-orizanol is an antioxidant present in rice bran oil, but absent in other vegetable oils, which were attributed to antioxidant and hypocholesterolemic effects. The content of γ-orizanol in crude rice bran oil varies between 1-2%, but during neutralization in chemical refining this substance is transferred to soapstock. The aim of this research is to study an alternative technique of physical refining in light conditions with the purpose of preserving γ-orizanol. Inativacted and extrused rice bran obtained by the production of parboilizated rice was used to extract crude rice bran oil (Oryza sativa by the expeller method. The process of

  10. MODIFICACIONES A LAS PROPIEDADES FÍSICAS DEL SUELO POR LA ACCIÓN DE DIFERENTES PRÁCTICAS PRODUCTIVAS PARA CULTIVAR ARROZ (Oryza sativa L.)

    OpenAIRE

    G. S Díaz; Cabrera, J A; Ruiz, M.

    2009-01-01

    La investigación se desarrolló entre 1999 y 2003, con el objetivo de determinar el efecto de tres manejos diferentes de producción sobre la densidad real, densidad de volumen, porosidad total del suelo y el rendimiento del arroz. Los factores evaluados fueron los años de estudio y manejos de producción: 1. ¿arroz-arroz¿ monocultivo, se realizaron dos siembras cada año en la misma superficie de suelo; 2. rotación anual ¿arroz-barbecho-ganado-arroz¿, la siembra se realizó en la época lluvios...

  11. PRÁCTICAS AGROECOLÓGICAS PARA DISMINUIR LAS AFECTACIONES DEL ARROZ ROJO (Oryza sativa L.. I. ROTACIÓN CON SOYA, MANEJO DEL AGUA Y LABOREO DEL SUELO EN HÚMEDO

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    G. S. Díaz

    2003-01-01

    Full Text Available En Cuba, la producción arrocera está seriamente afectada por la incidencia del arroz rojo Oryza sativa L., los niveles de daños se contabilizan más en el sector estatal, pero afectan por igual al resto de las formas de producción. En la Estación Experimental del Arroz "Los Palacios", perteneciente al Instituto Nacional de Ciencias Agrícolas (INCA se desarrolló el presente trabajo en el período 1999-2001, bajo diseño experimental de bloques al azar con cuatro repeticiones, donde se probaron dos prácticas agroecológicas para buscar soluciones alternativas al control químico de esta especie vegetal, en las cuales se practicó la rotación anual arroz¿soya, después del cultivo de ésta: en una de las variantes se inundó el suelo por 30 días y posteriormente se laboró por fangueo; en la otra, después de la soya también se laboró el suelo por fangueo con proceso, los resultados de ambas tecnologías se compararon con el método de la práctica productiva consistente en la desinfección química. La rotación de cultivo arrozsoya, y el laboreo de suelo por fangueo con las variantes probadas, permiten disminuir en dos años más del 98 % de las mezclas de los arroces rojos y mejorar sus condiciones físicoquímicas, con lo que se logra incrementar los rendimientos del arroz cultivado de 1.5 a más de 5 t.ha-1. La ganancia obtenida en las variantes agroecológicas estudiadas fue superior a 1500 pesos.ha-1.

  12. Perspectivas del uso de bacterias rizosféricas en el control de Pyricularia grisea (Cooke Sacc. en el cultivo del arroz (Oryza sativa L.

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    Yanelis Acebo Guerrero

    2011-04-01

    Full Text Available Prospect of the use of bacteria in the control Pyricularia grisea (Cooke Sacc. on rice (Oriza sativa L. Título corto: Bacterias rizosféricas para controlar la piriculariosis ResumenEl arroz es fuente de alimento para una gran parte de la población mundial, con alto promedio de consumo anual. En este cultivo las enfermedades de origen microbiano constituyen uno de los factores que inciden en la obtención de bajos rendimientos y calidad de los granos. La piriculariosis o añublo del arroz, causada por Pyricularia grisea, es la enfermedad más importante en este cultivo en América Latina, ya que puede provocar hasta el 100% de reducción de los rendimientos. Como parte de la estrategia de agricultura sostenible, se trata de controlar estos patógenos y lograr altos rendimientos del cultivo mediante una combinación adecuada de fertilizantes químicos y productos biológicos. En este sentido, la aplicación de inoculantes bacterianos constituidos por bacterias promotoras del crecimiento vegetal (Plant Growth- Promoting Bacteria, PGPB, por sus siglas en inglés ha constituido una alternativa ecológica que favorece la conservación del medioambiente y el ecosistema. Este trabajo tiene como objetivo abordar el estado actual y las perspectivas de uso de bacterias rizosféricas en el control de Pyricularia grisea en el cultivo del arroz, tratando algunos temas relevantes, como son las principales enfermedades que afectan al cultivo, los géneros de PGPB más utilizados para el control de las mismas y sus principales mecanismos de acción. Palabras clave: bacterias rizosféricas, arroz, piriculariosis. AbstractRice is an important food supply for a large part of the world population and its consumption rates are very high. Microbial diseases are one of the main causes that provoke low yields and low-quality spotted grains. Although fungi, bacteria and viruses are mostly the responsible for these losses, fungal diseases strike more frequently

  13. Comparación de variables físicas, culinarias y amilográficas del cultivar de arroz (Oryza sativa L. MD248 con dos cultivares comerciales de arroz en Venezuela

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    Manuel Ávila

    2014-12-01

    Full Text Available El objetivo del estudio fue evaluar las variables físicas culinarias y amilográficas del cultivar MD248 y su potencial como arroz de mesa en Venezuela. Para ello, MD248 se sembró bajo un diseño completamente aleatorizado, en Calabozo (Estado Guárico, Venezuela, junto con 2 cultivares empleados como testigos de buena (D-Sativa y baja (D-Primera calidad culinaria. De cada cultivar se cosecharon 2.500 g de arroz paddy y se procesaron hasta obtener una fracción de arroz entero pulido la cual fue evaluada para: largo, ancho, espesor, relación largo/ancho (L/A, peso de 100 granos, contenido de amilosa aparente, tiempo de cocción, relación de expansión volumétrica (REV, relación de absorción de agua (RAA, viscosidades pico, media, final, ‘breakdown’, ‘setback’, consistencia y temperatura de empaste del perfil amilográfico. Además, atributos sensoriales descriptivos (brillo, percepción visual de la adhesividad, adhesividad manual, adhesividad entre los granos y preferenciales (apariencia, adhesividad, calidad global del arroz cocido. Los resultados indicaron diferencias estadísticas altamente significativas (p ≤ 0,01 entre los cultivares para largo, relación L/A, peso de 100 granos, contenido de amilosa aparente, tiempo de cocción, REV, RAA y todas las variables amilográficas, excepto para viscosidad media y temperatura de empaste (p > 0,05. En los perfiles descriptivo y preferencial hubo diferencias altamente significativas (p ≤ 0,01 para todos los atributos evaluados. MD248 estuvo asociado con los mayores valores de largo de grano (7,07 mm, relación L/A (3,43, peso de 100 granos (2,20 g y amilosa aparente (19,14 %, y con los menores valores de tiempo de cocción (22,90 min, REV (3,07, RAA (1,55, viscosidad pico (159,61 RVU, media (130,10 RVU, p > 0,05 y ‘breakdown’ (29,51 RVU. MD248 presentó un perfil descriptivo comparable al cultivar de buena calidad culinaria y se diferenció ampliamente del cultivar de baja

  14. Tolerância de cultivares de arroz irrigado (Oryza sativa ao herbicida nicosulfuron e à mistura formulada de imazethapyr + imazapic Tolerance of rice (Oryza sativa cultivars to nicosulfuron and to the formulated mixture imazethapyr + imazapic

    Directory of Open Access Journals (Sweden)

    L.C. Fontona

    2007-12-01

    Full Text Available O objetivo deste estudo foi avaliar a tolerância de cultivares de arroz irrigado ao herbicida nicosulfuron e à mistura formulada de imazethapyr + imazapic. Para isso, foram conduzidos experimentos em casa de vegetação da Faculdade de Agronomia Eliseu Maciel (UFPel, no município de Capão do Leão (RS. Os tratamentos constaram de dois cultivares de arroz irrigado (IRGA 417 e IRGA 422CL e de sete doses dos herbicidas imazethapyr + imazapic e nicosulfuron, aplicados em arroz (estádios de desenvolvimento V2 ou V4. As variáveis analisadas foram fitotoxicidade dos herbicidas, estatura de planta, massa seca da parte aérea e área foliar. Houve interações significativas entre os fatores estudados para as variáveis-respostas avaliadas. Incrementos nas doses dos herbicidas resultaram em respostas crescentes de fitotoxicidade ao arroz, resultando em redução no crescimento das plantas. O cultivar IRGA 417 foi suscetível à ação dos herbicidas. Por sua vez, a tolerância do cultivar IRGA 422CL não é restrita à mistura formulada de imazethapyr + imazapic, ocorrendo também para o herbicida nicosulfuron.The objective of this study was to evaluate the tolerance of rice cultivars to the formulated mixture of nicosulfuron and imazethapyr + imazapic. Greenhouse experiments were carried out at the Faculdade de Agronomia Eliseu Maciel (UFPel in Capão do Leão (RS. The treatments consisted of two rice cultivars ('IRGA 417' and 'IRGA 422CL' and seven rates of the herbicides imazethapyr + imazapic and nicosulfuron, applied on rice (stages V2 or V4. The variables evaluated were herbicide injury, plant height, shoot dry biomass and leaf area. Significant interactions were found among the factors tested for the response-variables evaluated. Increased herbicide rates resulted in increased rice injury responses leading to decreases in plant height, biomass, and leaf area. 'IRGA 417' cultivar was susceptible to the herbicides. On the other hand, the

  15. Diseño de un sistema experto para la identificación de enfermedades en el cultivo del arroz Oryza sativa L. en Colombia

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    Jaramillo A. Alejandro

    1993-12-01

    Full Text Available

    El "Sistema Experto" brinda información referente a la etiología, epidemiología, y control de 29 enfermedades del cultivo. Además cuenta con ayudas gráficas que sirven para la comparación visual de las conclusiones dadas por el programa y la observación realizada en el campo. El sistema realizado es el fruto del trabajo conjunto entre un experto (Fitopatólogo y los autores con la asesoría del director del trabajo, de otra parte el conocimiento está sustentado también en la revisión de literatura. Los criterios utilizados para la elaboración del programa fueron: estado fenológico de la planta, órgano o parte afectada, síntoma general y síntoma específico. Este "software" trabaja en computadores IBM o compatibles con sistema operacional MS-DOS, fue programado en lenguaje Turbo prolog y se utilizó un "System" para el enlace de los gráficos que son manejados por el progran18.VGIF.EXE.

    An "Expert System" to identify diseases in the Rice crop Oryza sativa L. in Colombia, It provides information about etiology, epidemiology, and control of 29 diseases. Also it has graphic helps which provide a visual comparison with field observations. The work was based on knowledge acquired fron expert and literature revision. The criteria used were: plant phenology, plant part damage, general damage and specific damage. This "software" works with IBM compatible MS-DOS and Turbo Prolog Shell, it must be used in computers wich have a color monitor.

  16. Plataformas de colheita e colheita manual com trilha mecânica sobre a qualidade de sementes de arroz ( Oryza sativa, L. Harvest header and manual harvest with mechanical strip on rice ( Oryza sativa, L. seeds quality

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    Daniel Fernandez Franco

    1999-06-01

    Full Text Available Durante a colheita do arroz irrigado ocorrem perdas e danos físicos e fisiológicos às sementes. No final da década de oitenta, surgiram as plataformas recolhedoras, que retiram ou arrancam o grão ao invés de cortar a panícula, porém, pouco se conhece a respeito dos danos físicos e fisiológicos que este sistema de plataforma pode causar às sementes. Este trabalho teve por objetivo avaliar os danos mecânicos causados às sementes dos cultivares de arroz BR-IRGA 409 e BR-IRGA 410, por três formas de colheita: (a colheita manual e trilha mecânica; (b colheita com plataforma de corte; (c colheita com plataforma recolhedora. Quando a colheita foi mecânica, realizou-se a coleta das amostras diretamente no graneleiro. O delineamento experimental foi blocos ao acaso, com seis repetições. Os resultados demonstraram que as sementes de arroz irrigado dos cultivares estudados não apresentaram diferenças significativas em suas qualidades físicas e fisiológicas, quando colhidas com plataforma de corte e com a plataforma recolhedora. Estes dois métodos de colheita, porém, apresentaram danos significativamente maiores quando comparados à colheita manual e trilha mecânica.During irrigated rice harvesting occur losses and physical and phisiological seed damage. Late 80's, appeared the strippers headers that strip the grain, instead of cutting the spike. However, little is know about physical and phisiological seed damage by harvest header. The objective of this work was to evaluate the mechanical damage caused to BR-IRGA 409 and BR-IRGA 410 rice cultivars by three harvesting methods: (a manual harvesting and mechanical strip; (b cutterbar harvesting and; (c stripper header harvesting. Samples were collected directly in the grain tank when the harvest was mechanical. The experimental design was randomized blocks with six replications. Results demonstrated that the rice seeds of the studied variety didn't showed significant differences in

  17. Perspectivas del uso de bacterias rizosféricas en el control de Pyricularia grisea (Cooke Sacc.) en el cultivo del arroz (Oryza sativa L.)

    OpenAIRE

    Yanelis Acebo Guerrero; Annia Hernández-Rodríguez; Narovis Rives Rodríguez; Miguel Gerardo Velázquez del Valle; Ana Niurka Hernández-Lauzardo

    2011-01-01

    El arroz es fuente de alimento para una gran parte de la población mundial, con alto promedio de consumo anual. En este cultivo las enfermedades de origen microbiano constituyen uno de los factores que inciden en la obtención de bajos rendimientos y calidad de los granos. La piriculariosis o añublo del arroz, causada por Pyricularia grisea, es la enfermedad más importante en este cultivo en América Latina, ya que puede provocar hasta el 100% de reducción de los rendimientos. Como parte de la ...

  18. COMPORTAMENTO DE CULTIVARES PRECOCES DE ARROZ (Oryza sativa L. SUBMETIDAS A DIFERENTES DOSES DE SULFATO DE ZINCO BEHAVIOR OF SHORT CYCLE RICE CULTIVARS (Oryza sativa L. UNDER ZINC SULPHATE DOSES

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    Ronaldo Gardon Batista

    2007-09-01

    Full Text Available

    A falta de informações atualizadas sobre exigências de cultivares altamente produtivos conduziu à elaboração de uma pesquisa objetivando avaliar os efeitos de seis doses de sulfato de zinco (0,0 = testemunha; 15,0; 30,0; 45,0; 60,0 e 75,0 kg/ha sobre características agronômicas das cultivares precoces de arroz primavera e maravilha. Os tratamentos consistiram da combinação dos diferentes níveis dos fatores cultivares e doses de sulfato de zinco, distribuídos no delineamento de blocos ao acaso em três repetições, totalizando 36 unidades experimentais. Foram avaliados: a população de plantas aos 40 dias após a emergência (DAE e no final do ciclo; b altura de planta; c rendimento de grãos; d peso de 100 grãos. Concluiu-se que, até que novos estudos comprovem os resultados obtidos, deve-se manter a recomendação em uso.

    PALAVRAS-CHAVE: Arroz; cultivares; sulfato de zinco.

    The lack of up-to-date information on the demands of high productive rice cultivars motivated the elaboration of a research aiming to evaluate the effects of six doses of zinc sulphate (0.0 = control; 15.0; 30.0; 45.0; 60.0 and 75.0 kg/ha on agronomic characteristics of short rice cultivars ‘primavera’ and ‘maravilha’. The treatments consisted of the combination of different cultivars and dosages of zinc sulphate, distributed in completely randomized blocks in three repetitions, making up 36 experimental units. The following aspects were evaluated: a plants population up to 40 days after germination (DAE and at the end of the cycle; b plant height; c grains yield; d weight of 100 grains. Until further experiments are carried out in order to confirm our results, the present technical recommendation should be kept in use.

    KEY-WORDS: Rice

  19. Effect of gamma irradiation on physico-chemical and sensorial characteristics of rice (Oryza sativa L.) and on the development of Sitophilus oryzae L; Efeito da irradiacao gama nas caracteristicas fisico-quimicas e sensoriais do arroz (Oryza sativa L.) e no desenvolvimento de Sitophilus oryzae L

    Energy Technology Data Exchange (ETDEWEB)

    Zanao, Cintia Fernanda Pedroso; Canniatti-Brazaca, Solange Guidolin; Sarmento, Silene Bruder Silveira [Escola Superior de Agricultura Luiz de Queiroz (ESALQ/USP), Piracicaba, SP (Brazil). Dept. de Agroindustria, Alimentos e Nutricao], e-mail: sgcbrazaca@esalq.usp.br, e-mail: cpedroso@claretianas.com.br, e-mail: sbssarme@esalq.usp.br; Arthur, Valter [Centro de Energia Nuclear na Agricultura (CENA/USP), Piracicaba, SP (Brazil). Lab. de Irradiacao de Alimentos e Radioentomologia], e-mail: arthur@cena.usp.br

    2009-01-15

    The objective of this research was to verify the viability of the gamma radiation as polished rice (Oryza sativa L.) conservation method. The samples were irradiated with doses of 0.5; 1.0; 3.0; and 5.0 kGy. Analysis of the grain breakage during the enriching process, longevity and reproduction of the Sitophilus oryzae L., centesimal composition, apparent amylose content, starch paste properties, color (instrumental), and the sensorial evaluation of raw and cooked rice were performed. It was verified that the irradiation did not change the percentage of grain breakage during the enrichment process, and it caused a negative effect on the development of insects. The irradiation did not change significantly the centesimal composition and the apparent amylase content. The Tukey test (p {<=} 0.05) was conducted to verify the differences between the treatments. Gamma irradiation affected the pasting properties of the rice flour. Pasting parameters as temperature, peak, final viscosity, and setback values showed decreasing values with irradiation doses. Differences were detected in the sensorial aspect among the samples, and the sample irradiated with the dose of 1.0 kGy presented greater averages. Regarding the instrumental color parameter, it was observed the difference in the values b{sup *} indicating that the rice changed the white color for yellowish with the increase in the irradiation dose. The irradiation dose of 1.0 kGy proved the best to meet the objectives of this study. (author)

  20. HARVEST TIME AND PHYSIOLOGIC QUALITY OF SEEDS IN IRRIGATED RICE (Oryza sativa cv. BRS RORAIMA ÉPOCA DE COLHEITA E QUALIDADE FISIOLÓGICA DE SEMENTES EM ARROZ IRRIGADO (Oryza sativa cv. BRS RORAIMA

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    Oscar José Smiderle

    2008-09-01

    Full Text Available

    Harvest time is one of most important factors influencing rice seed characteristics for purpose of either planting or milling. With the objective to determine a proper harvesting  time, irrigated rice seeds of cultivar BRS Roraima were harvested at 15, 22, 29, 36, 43 and 50 days after flowering (DAF, and assessed according to humidity, viability, dry mass of 1,000 seeds, whole grain yield, productivity and storability. Seeds harvested 29 DAF showed high quality and its productivity was equivalent to the subsequent periods. Seeds harvested 50 DAF showed good performance, except for whole grain yield. Harvests 15 and 22 DAF were unsuitable, reducing the physiologic quality of seeds, mill efficiency and high initial humidity. The adequate harvest time for cultivar BRS Roraima is between 29 and 43 DAF, when seeds present higher yield, dry mass, whole grain yield, physiologic quality and storability.

    KEY-WORDS: Physiologic quality; whole grain; humidity.

    A época de colheita é um dos fatores mais importantes que influenciam as características da semente de arroz, seja para semeadura ou para consumo. Com o objetivo de determinar a época adequada de colheita de arroz irrigado, para a cultivar BRS Roraima, sementes foram colhidas aos 15, 22, 29, 36, 43 e 50 dias após o florescimento (DAF e avaliadas quanto à umidade, viabilidade, massa seca de 1.000 sementes, rendimento de grãos inteiros, produtividade e armazenabilidade. As sementes colhidas aos 29 DAF

  1. Plantas invasoras da cultura de arroz (Oryza sativa L. no Estado de São Paulo: 2 - monocotiledôneas Weeds occuring in rice crops (Oryza sativa L. in the State of São Paulo: 2. monocotyledons

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    C. Aranha

    1982-06-01

    Full Text Available Foi realizado um levantamento das plantas invasoras na cultura do arroz, concentrado nas regiões com maior área cultivada no Estado de São Paulo. Cada uma das espécies levantadas foi estudada em seu ciclo, porte, fenologia e modo ou modos de reprodução. O hábito de cre sc imento herbáceo, o ciclo anual, o florescimento e frutificação nos meses mais quentes do ano e a reprodução através de sementes foram preponderantes. Cada gênero representado por mais de uma espécie mereceu a confecção de chave analítica auxiliar objetivando oferecer algum subsídio para a identificação da espécie em sua primeira fase de desenvolvimento. Foram levantadas as sinonímias científica e vulgar e, sempre que possível, localizada a etimologia do termo que se pre stou à nomenclatura genérica e específica. De cada espécie é fornecida uma diagnose da plântula além da ilustração planificada, tornando, portanto, mais fácil o reconhecimento da mesma. Das seis famílias monocotiledôneas encontradas, num total de 26 espécies identificadas, quantitativamente mereceram destaque as seguintes: Gramineae, Cyperaceae e Commelinaceae.A survey of weeds growing in rice crops in the State of São Paulo was conducted. The life cycle, size, phenology and mode of reproduction of each of the collected species were studied. The herbaceous growth, annual life cycle, blooming and fructification during the warmest months of the ye ar and diss emination by seeds were mainly predominant for the studied species. From the six monocoty ledoneous families observed with a to ta l of 26 identified species, three were quantitatively more important: Gramineae, Cyperaceae and Commelinaceae. A taxonomical key was written for those genera with mo re than one species in an at tempt to help identification in the first growth stage. All the scientific and common names and when possible, the etimology of the genera species were included. In order to facilitate the keying and

  2. Plantas invasoras da cultura do arroz (Oryza sativa L. no Estado de São Paulo. 1. Dicotiledôneas Weeds occuring in rice crops (Oryza sativa L. in the State of Sao Paulo. 1. Dicotyledons

    Directory of Open Access Journals (Sweden)

    C. Aranha

    1981-06-01

    Full Text Available Foi realizado um levantamento das plantas invasoras na cultura do arroz, concentrado nas regiões com maior área cultivada no Estado de São Paulo. Cada uma das espécies levantadas foi estudada em seu ciclo, porte, fenologia e modo ou modos de reprodução. O hábito de crescimento herbáceo, o ciclo anual, o florescimento e frutificação nos meses mais quentes do ano e a reprodução através de sementes foram evidentemente preponderantes. Cada gênero representado por mais de uma espécie mereceu a confecção de chave analítica auxiliar objetivando oferecer algum subsidio para a identificação da espécie em sua primeira fase de desenvolvimento. Foram levantadas as sinonímias científica e vulgar e, sempre que possível, localizada a etimologia do termo que se prestou à nomenclatura genérica ou especifica. De cada espécie é fornecida uma diagnose da plântula além da ilustração planificada, tornando, portanto, mais fá cil o re conhecimento da mesma. Das 15 famílias dicotiledôneas encontradas, num total de 31 espécies identificadas, quantitativamente merecem destaque as seguintes: Compositae, Malvaceae e Amaranthaceae.A survey of weeds growing in rice crops in the State of Sao Paulo was conducted. The life cycle, size, phenology and mode of reproduction of each of the collected species were studied. The herbaceous growth, annual life cycle, blooming and fructification during the warmest months of the year and dissemination by seeds were mainly predominant for the studied species. From the 15 dicotyledoneous families observed with a to tal of 31 identified species, three were quantitatively more important: Compositae, Malvaceae and Amaranthaceae. A toxonomical key was written for those genera with more than one species in an attempt to help identification in the first growth stage. All the scientific and common names and when possible, the etimology of the genera or species are included. In order to facilitate the keying and

  3. Efecto de la labranza mínima y la convencional en arroz (oryza sativa l.) En la región Huetar norte de Costa Rica

    OpenAIRE

    Rojas, Luis A.; Alex\\u00E1nder Mora; Harold Rodr\\u00EDguez

    2002-01-01

    En la zona norte de Costa Rica en donde se establecieron dos lotes: uno de labranza mínima (3 ha), y otro de labranza convencional (0,80 ha). La siembra en ambos sistemas de labranza se realizó con una sembradora abonadora hidráulica. La variedad de arroz utilizada fue la CR 2515. En labranza mínima la siembra se realizó en condiciones de alta humedad, labor que prácticamente es imposible en labranza convencional. En este mismo sistema de labranza hubo una menor germin...

  4. DIFERENTES MOMENTOS DE ESTABLECIMIENTO DEL ANIEGO PERMANENTE EN EL CULTIVO DEL ARROZ (Oryza sativa L.) Y SU INFLUENCIA SOBRE EL RENDIMIENTO, SUS COMPONENTES Y EL CONTROL DE MALEZAS

    OpenAIRE

    R. Polón; Yanet Parra; R. I. Castro; R. Morejón

    2001-01-01

    En la Estación Experimental del Arroz "Los Palacios", durante tres años en campo, se desarrolló un estudio para determinar el momento de establecimiento del aniego permanente en el cultivo sin afectar los rendimientos. Los resultados arrojaron que los diferentes momentos en que se establecieron los aniegos permanentes no afectaron significativamente el rendimiento agrícola y sus componentes, lográndose una reducción en los días de riego. En cuanto al comportamiento del ciclo, se pudo observar...

  5. ESTIMULACIÓN DE ALGUNAS ENZIMAS RELACIONADAS CON LA DEFENSA EN PLANTAS DE ARROZ (Oryza sativa, L.) OBTENIDAS DE SEMILLAS TRATADAS CON QUITOSANA

    OpenAIRE

    Aida T. Rodríguez; M. A. Ramírez; A. B. Falcón; F. Guridi; Elizabeth Cristo

    2004-01-01

    La aplicación de elicitores es uno de los métodos más ecológicos y económicos para el control de plagas y enfermedades. La quitosana es un elicitor que tiene la capacidad de estimular mecanismos defensivos en las plantas, las cuales van a conferir resistencia a enfermedades. En el trabajo se presentan los primeros resultados logrados en Cuba en el empleo de elicitores quitinosos en el cultivo del arroz, en particular de la quitosana obtenida en el Departamento de Fisiología y Bioquímica Veget...

  6. ESTIMULACIÓN DE ALGUNAS ENZIMAS RELACIONADAS CON LA DEFENSA EN PLANTAS DE ARROZ (Oryza sativa, L. OBTENIDAS DE SEMILLAS TRATADAS CON QUITOSANA

    Directory of Open Access Journals (Sweden)

    Aida T. Rodríguez

    2004-01-01

    Full Text Available La aplicación de elicitores es uno de los métodos más ecológicos y económicos para el control de plagas y enfermedades. La quitosana es un elicitor que tiene la capacidad de estimular mecanismos defensivos en las plantas, las cuales van a conferir resistencia a enfermedades. En el trabajo se presentan los primeros resultados logrados en Cuba en el empleo de elicitores quitinosos en el cultivo del arroz, en particular de la quitosana obtenida en el Departamento de Fisiología y Bioquímica Vegetal del Instituto Nacional de Ciencias Agrícolas (INCA. Durante la investigación se determinó in vivo el efecto de este compuesto aplicado a la semilla, en la estimulación de algunas enzimas defensivas como la PAL, glucanasa, quitinasa y quitosanasa en plantas de arroz (variedad J-104. Se observó el mayor incremento de la actividad de estas enzimas en las plantas tratadas con respecto al control. La mejor dosis utilizada fue 1000 mg.L-1.

  7. Plantas invasoras da cultura de arroz (Oryza sativa L.) no Estado de São Paulo: 2 - monocotiledôneas

    OpenAIRE

    C. Aranha; R.M. Pio

    1982-01-01

    Foi realizado um levantamento das plantas invasoras na cultura do arroz, concentrado nas regiões com maior área cultivada no Estado de São Paulo. Cada uma das espécies levantadas foi estudada em seu ciclo, porte, fenologia e modo ou modos de reprodução. O hábito de cre sc imento herbáceo, o ciclo anual, o florescimento e frutificação nos meses mais quentes do ano e a reprodução através de sementes foram preponderantes. Cada gênero representado por mais de uma espécie mereceu a confecção de ch...

  8. EFECTOS DEL ALUMINIO EN LA DIVISIÓN Y EL ALARGAMIENTO CELULAR EN PLÁNTULAS DE ARROZ (Oryza sativa L.

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    Idioleidys Alvarez Bello

    2012-01-01

    Full Text Available Teniendo en cuenta que la toxicidad por aluminio es el efecto más importante en los suelos ácidos y constituye el mayor factor limitante del crecimiento y la producción vegetal, se desarrolló una investigación que tuvo como objetivo fundamental determinar el efecto del aluminio en los procesos de división y alargamiento celular en dos cultivares comerciales de arroz, así como la relación de estos con la inhibición del crecimiento radical. Se emplearon diferentes niveles de aluminio para imponer la condición de estrés y los ápices radiculares fueron sometidos al procesamiento tradicional para microscopía óptica. Las secciones teñidas se observaron al microscopio óptico (Zeiss con cámara digital acoplada y las dimensiones celulares se cuantificaron mediante el programa morfométrico ImageJ. Se demostró que el aluminio inhibió el crecimiento radical de las plántulas de arroz, como consecuencia del efecto tóxico del metal. Se observó una reducción del índice mitótico para ambos cultivares con el incremento de la concentración de aluminio y el estudio del alargamiento celular evidenció que las células radicales se acortaron en longitud y aumentaron su grosor. Los resultados demostraron que los desórdenes que provoca el metal en los dos procesos celulares evaluados son los responsables fisiológicos de la inhibición del crecimiento radical.

  9. INDICADORES DEL CRECIMIENTO INICIAL Y DEL ESTADO NUTRICIONAL PARA LA SELECCIÓN TEMPRANA DE GENOTIPOS DE ARROZ (Oryza sativa L. TOLERANTES A LA SALINIDAD

    Directory of Open Access Journals (Sweden)

    Alexis Lamz Piedra

    2015-01-01

    Full Text Available Con el objetivo de determinar posibles indicadores del crecimiento inicial y nutricionales para la selección temprana de genotipos de arroz tolerantes a la salinidad, se desarrollaron ensayos con dos cultivares con diferente grado de tolerancia a la salinidad ('Pokkali' y 'Amistad- 82' en condiciones controladas, con soluciones salinas ajustadas a conductividades eléctricas (CE de 8 y 12 dSm-1 mediante la adición de NaCl y un control con agua destilada. Se evaluó el porcentaje de germinación a los 15 días después de la siembra (DDS y los parámetros del crecimiento altura de la planta, longitud de la raíz, masa seca de la parte aérea (MSPA, masa seca del sistema radical (MSSR a los 21 DDS. En tanto, en hojas y raíces de ambos cultivares, en condiciones semicontroladas y utilizando soluciones nutritivas para la simulación del estrés salino, con CE de 8 y 12 dSm-1, se determinó en estado de plántula, el contenido de nitrógeno (N, fósforo (P, potasio (K, sodio (Na, así como la relación sodio/potasio. Los resultados evidencian un comportamiento diferencial de los cultivares en cuanto a su grado de tolerancia a la salinidad, lo que permite usar algunas de las variables evaluadas, como indicadores para la discriminación de genotipos de arroz tolerantes a salinidad.

  10. Physico-chemical and sensorial characteristics of rice (Oryza sativa L.) irradiated and the effect in Sitophilus oryzae L. development;Caracteristicas fisico-quimicas e sensoriais do arroz (Oryza sativa L.) irradiado e o efeito no desenvolvimento de Sitophilus oryzae L.

    Energy Technology Data Exchange (ETDEWEB)

    Zanao, Cintia Fernanda Pedroso

    2007-07-01

    Rice is exposed to injuries especially due to the attack of insects, which represent great qualitative and quantitative losses. The aim of the present research was to verify the viability of the gamma irradiation as rice (Oryza sativa L.) conservation method; its efficiency in the control of an important pest for stored grains Sitophilus oryzae L. and the effects that irradiation may present in irradiated grains in relation to the sensory aspect and starch alterations. Samples were composed of polished rice and the gamma irradiation dosages used were 0.5; 1.0; 3.0; and 5.0 kGy, and kept at room temperature. Analyses of the grain breakage percentages during processing and the longevity and reproduction of the rice weevil were performed. Analyses of the centesimal composition, phytic acid, apparent amylose content and starch paste properties were also conducted, as well as analyses of the rice color (instrumental) and acceptability (hedonic test), aimed at the determination of the raw and cooked rice sensory quality. It was verified that the gamma irradiation did not change the grain breakage percentage significantly and caused a negative effect on the insect development. Irradiation did not change the centesimal composition significantly. No significant values of phytic acid were found because during rice processing, the outer part (bran) containing 85-92% of total phytates was removed. Values from 17.33 to 18.44% for the apparent amylose content were found, and irradiation did not affect the rice starch amylose content significantly. The paste properties results were significantly changed, where reduction on the paste temperature, decrease on the time for the occurrence of the peak viscosity, reduction on the final viscosity values were observed. The retrogradation tendency became less intense in starches with increasing irradiation dosages. Statistical differences (p<0.05) were detected in the sensory aspect between irradiated and non-irradiated samples, and the

  11. Efecto de la labranza mínima y la convencional en arroz (oryza sativa l. En la región Huetar norte de Costa Rica

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    Luis A. Rojas

    2002-01-01

    Full Text Available En la zona norte de Costa Rica en donde se establecieron dos lotes: uno de labranza mínima (3 ha, y otro de labranza convencional (0,80 ha. La siembra en ambos sistemas de labranza se realizó con una sembradora abonadora hidráulica. La variedad de arroz utilizada fue la CR 2515. En labranza mínima la siembra se realizó en condiciones de alta humedad, labor que prácticamente es imposible en labranza convencional. En este mismo sistema de labranza hubo una menor germinación y población de plantas de arroz, principalmente en donde había más rastrojo. En el ciclo 2001 en labranza mínima hubo mayor densidad de Murdania nudiflora, Echinocloa colonum y Digitaria sp. En labranza convencional la maleza predominante fue Cyperus rotundus. Las plagas y enfermedades no fueron factor limitante en el manejo del cultivo en ambos sistema de labranza, no obstante, en labranza mínima se observó una mayor población de hormigas del género Solenopsis. En el ciclo de siembra 2001 en labranza convencional hubo mayor número de panículas /m2 > a 20 cm que en labranza mínima, mientras que en el ciclo 2000 en labranza mínima la cantidad de panículas/m2>20cm fue muy baja. De igual forma, en labranza convencional el número de granos por panícula fue mayor en todas las longitudes de pan ículas y el peso de 1000 granos fue similar a labranza mínima en todas las longitudes de panículas. El rendimiento estimado fue mayor en labranza convencional con 6,74 t/ha, mientras que en labranza mínima fue de 5,91 t/ha.

  12. Producción y formulación de prototipos de un biofertilizante a partir de bacterias nativas asociadas al cultivo de arroz (Oryza sativa

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    Johanna Rojas Sierra

    2009-01-01

    Full Text Available Los biofertilizantes son productos con base en microorganismos que están involucrados en los procesos nutritivos de las plantas. Además de los microorganismos, es necesario mejorar las condiciones de formulación de los productos para mantener la viabilidad y estabilidad en almacenamiento y campo. El objetivo de este trabajo fue evaluar formulaciones, las cuales se realizaron mezclando el ingrediente activo (bacteria fijadora de nitrógeno en diferentes relaciones con sustancias húmicas, Polietilenglicol, Carbopol® y quelatos. Los prototipos que mantuvieron la viabilidad durante un periodo de aproximadamente tres meses se evaluaron en cultivos de arroz. Los formulados se evaluaron teniendo en cuenta la dosis aplicada (1 y 2 L/ha; el resultado de uno de los prototipos (M= 8500 kg/ha mostró un efecto benéfico sobre la producción superando a los testigos (7625 kg/ha. Los resultados de este trabajo, además de contribuir con el aumento de la estabilidad en almacenamiento de algunos prototipos, permitieron mostrar buenos resultados en campo (producción, ratificando la importancia que tienen estos microorganismos en los agroecosistemas. Palabras clave: biofertilizantes; formulación; nutrición vegetal; prototipos; sustancias húmicas; Biofertiliser; formulation; humic substance; plant nutrition; prototype.

  13. PRÁCTICA DE DIFERENTES ALTURAS DE CORTE EN EL REBROTE Y SU INFLUENCIA EN EL RENDIMIENTO DEL ARROZ (Oryza sativa L. EN UNA VARIEDAD DE CICLO MEDIO

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    Ricardo Polón Pérez

    2012-01-01

    Full Text Available El trabajo se desarrolló en la CCSf «Menelao Mora», en un suelo Hidromórfico Gley Nodular Petroférrico, en el período comprendido entre 2006-2009, para conocer el efecto del rebrote o soca sobre el rendimiento agrícola con el uso de una variedad de arroz de ciclo medio (Prosequisia. Los resultados arrojaron que en la medida que los cortes en el rebrote o retoño fueron más bajos comparados con el testigo, se alcanzó un rendimiento superior respecto al cultivo principal (primera cosecha; similar comportamiento presentó el índice de área foliar (IAF y el número de tallos fértiles. Se redujo el ciclo de retoño respecto al cultivo de la primera cosecha en un rango de tiempo entre 60 a 65 días, no fue necesario hacer aplicaciones de herbicidas y se consumió menor cantidad de agua de riego.

  14. Respuesta de un mutante semi-enano de arroz (Oryza sativa L. a la aplicación de ácido giberelico.

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    Rafael Orozco

    2016-03-01

    Full Text Available En esta investigación se estudió el papel que juega el ácido giberélico (AG3 en la capacidad de elongación de los nudos del mutante semi-enano de arroz 2B-95. Este mutante, con una altura entre 65 a 90 cm, fue obtenido por irradiaciones gamma Co-60 a partir de un material de porte alto denominado WS con una altura promedio de 165 cm. Como testigo adicional se utilizó la variedad semi-enana CR-1113. El trabajo fue realizado en condiciones in vitro usando el AG3 en concentraciones de 0,20, 30 y 40 ppm la respuesta del mutante y de los otros dos genotipos a la aplicación exógena de la hormona se llevó a cabo midiendo la longitud de la vaina de la segunda hoja emergida después de la germinación de la semilla según una modificación de la metodología de HARADA y VERGARA (1971. Los resultados indican que en los genotipos WS y CR-1113, el largo de la vaina de la segunda hoja a los 11 días de edad, aumentó con todas las concentraciones de AG3 evaluadas, mientras que en el mutante semi-enano 2B-95 el efecto sólo fue significativo (P<0,05 en las concentraciones de 20 y 30 ppm. La concentración de 40 ppm en este genotipo no funcionó como activador del sistema genético vinculado con el  metabolismo del AG3

  15. Herencia de la resistencia al daño mecánico causado por Tagosodes orizicolus (Muir (Homoptera-Delphacidae en arroz Oryza sativa

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    Cuevas P. Federico

    1996-12-01

    Full Text Available

    In Colombia all rice varieties developed are reported as resistant to Tagosodes orizicolus. Given the narrow genetic base of the resistant sources, this study was undertaken to identify the resistant parents or donors more oftenly used in Latin America. The materials were characterized as resistant (Mudgo, Amistad 82, IRAT 120, IRAT 124, Makalioka or susceptible based on the free chosen test and non chosen test and on the survival and oviposition of the insect (Chianan 8, Colombia 1, Bluebonnet 50, IR 8 (lCA, IR 8 (IRRI, Tetep and Cica 8. The damage was associated with insect survival, oviposition and eggs eclotion. To determine heritability two parents (Makalioka and Mudgo, were crossed with IR 8 F1 and F3 populations were also evaluated based on the free chosen test.

     

     

    En Colombia las variedades de arroz desarrolladas se consideran como resistentes a Tagosodes orizicolus. Dada la estrechez genética de las fuentes de resistencia, se inició este estudio para identificar los progenitores donantes de resistencia usados con mayor frecuencia en América Latina. Los materiales se caracterizaron como resistentes (Mudgo, Amistad 82, IRAT, 120, IRAT 124 Y Makalioka o susceptibles (Chianan 8, Colombia 1, Bluebonnet 50, IR 8 (lCA, IR (IRRI, Tetep y Cica 8, con base en las pruebas de libre escogencia, no escogencia, sobre vivencia y oviposición. El daño estuvo asociado con la supervivencia, oviposición y eclosión de huevos del insecto. Para la determinación de la herencia se cruzaron los progenitores Makalioka y Mudgo con IR8. En la Progenie F1 del cruzamiento resistente x resistente el 111% de las plantas fueron susceptibles; Mudgo y Makalioka segregaron 23 y 41% de plantas susceptibles.

  16. Evaluación de la tolerancia a la salinidad en el estado juvenil de tres nuevas líneas de arroz (Oryza sativa L. utilizando marcadores morfoagronómicos

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    Elizabeth Cristo

    2001-01-01

    Full Text Available En el Laboratorio de Genética de la Estación Experimental del Arroz, se estudió el comportamiento de las nuevas líneas de arroz 8610, 8736, 8734, así como las variedades Pokkali y Amistad-82 (testigos tolerante y susceptible respectivamentea la salinidad a diferentes concentraciones salinas (0.4, 0.7, 1.0 % y un control con agua destilada. Se evaluaron el porcentaje de germinación, la altura de las plantas y longitud del sistema radical, mostrándose un comportamiento diferenciado en los genotipos bajo diferentes tenores salinos. Las líneas 8736 y 8734 mostraron mejor comportamiento en los tres indicadores analizados para este tipo de estrés, en comparación al testigo tolerante. Con el aumento de las concentraciones salinas, se afectaron los primeros estadios de crecimiento de las plantas.

  17. PATRONES ELECTROFORÉTICOS DE PEROXIDASAS, ESTERASAS, POLIFENOLOXIDASAS Y DAÑO FOLIAR EN PLÁNTULAS DE ARROZ (Oryza sativa L. SOMETIDAS A ESTRÉS DE BAJAS TEMPERATURAS

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    Sandra Díaz

    2005-01-01

    Full Text Available El trabajo se desarrolló en el Laboratorio de Genética y Mejoramiento Vegetal del Instituto Nacional de Ciencias Agrícolas en el 2002, con el objetivo de detectar perfiles electroforéticos polimórficos, que puedan ser utilizados como marcadores para asistir la selección de genotipos de arroz tolerantes al frío. Se estudió el efecto de diferentes tratamientos de temperatura (0, 5, 10, 15 y 20oC sobre plántulas de arroz con 25 días de germinadas de las variedades Dodo e IR-837 resistente y susceptible, respectivamente, las cuales crecieron en condiciones controladas (25oC. La extracción se realizó en tres momentos y se estudiaron los sistemas isoenzimáticos esterasas, peroxidasas y polifenoloxidasas, así como se evaluó el daño foliar medido por la permeabilidad de membrana. Los resultados indicaron que inmediatamente después de aplicado el estrés de temperatura, se producen los cambios más significativos en los patrones electroforéticos y se detectó que el sistema más sensible a los cambios de temperatura es el de polifenoloxidasas. Con el descenso de las temperaturas se incrementa gradual y bruscamente el porcentaje de daño foliar de las variedades resistente y susceptible, respectivamente.

  18. Evaluación de la precisión de dos laboratorios venezolanos para la determinación de amilosa aparente en arroz (Oryza sativa L. pulido

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    Manuel Ávila

    2013-01-01

    Full Text Available El presente trabajo se trazó como objetivo evaluar la precisión de dos laboratorios de ensayo venezolanos para la determinación de amilosa aparente de arroz pulido. Para ello se realizó un diseño experimental completo al azar cuyos tratamientos fueron definidos por la combinación específica de 2 laboratorios y 5 genotipos, a los cuales se les determinó el contenido de amilosa mediante el método Nº 61-03 de la American Association of Cereal Chemists. Los genotipos utilizados en el estudio fueron seleccionados en un amplio intervalo de amilosa (14 - 28 %. Las muestras se acondicionaron a partir de arroz paddy hasta obtener una harina y se entregaron codificadas a los laboratorios para los respectivos ensayos. Los resultados se analizaron mediante estadística descriptiva y para evaluar repetibilidad y estimar los resultados dudosos se aplicó la prueba de F del cociente de las varianzas entre laboratorios para cada genotipo. La reproducibilidad se evaluó mediante un análisis de varianza determinando los efectos genotipo, laboratorio y su interacción. La estadística descriptiva de los resultados indicó una baja variabilidad entre las réplicas dentro de cada laboratorio, la prueba de F reveló que no se presentaron datos dudosos y una adecuada repetibilidad de las réplicas dentro de cada laboratorio. El análisis de varianza indicó que existieron diferencias altamente significativas entre los genotipos (p 0,05 entre los dos laboratorios ni tampoco para la interacción genotipo x laboratorio. Los resultados indicaron una adecuada repetibilidad y reproducibilidad para un amplio intervalo de contenidos de amilosa a pesar del número reducido de laboratorio evaluados.

  19. Evaluación de la precisión de dos laboratorios venezolanos para la determinación de amilosa aparente en arroz (Oryza sativa L. pulido

    Directory of Open Access Journals (Sweden)

    Manuel Ávila

    2013-06-01

    Full Text Available El presente trabajo se trazó como objetivo evaluar la precisión de dos laboratorios de ensayo venezolanos para la determinación de amilosa aparente de arroz pulido. Para ello se realizó un diseño experimental completo al azar cuyos tratamientos fueron definidos por la combinación específica de 2 laboratorios y 5 genotipos, a los cuales se les determinó el contenido de amilosa mediante el método Nº 61-03 de la American Association of Cereal Chemists. Los genotipos utilizados en el estudio fueron seleccionados en un amplio intervalo de amilosa (14 - 28 %. Las muestras se acondicionaron a partir de arroz paddy hasta obtener una harina y se entregaron codificadas a los laboratorios para los respectivos ensayos. Los resultados se analizaron mediante estadística descriptiva y para evaluar repetibilidad y estimar los resultados dudosos se aplicó la prueba de F del cociente de las varianzas entre laboratorios para cada genotipo. La reproducibilidad se evaluó mediante un análisis de varianza determinando los efectos genotipo, laboratorio y su interacción. La estadística descriptiva de los resultados indicó una baja variabilidad entre las réplicas dentro de cada laboratorio, la prueba de F reveló que no se presentaron datos dudosos y una adecuada repetibilidad de las réplicas dentro de cada laboratorio. El análisis de varianza indicó que existieron diferencias altamente significativas entre los genotipos (p 0,05 entre los dos laboratorios ni tampoco para la interacción genotipo x laboratorio. Los resultados indicaron una adecuada repetibilidad y reproducibilidad para un amplio intervalo de contenidos de amilosa a pesar del número reducido de laboratorio evaluados.

  20. Riesgo agroambiental por metales pesados en suelos con Cultivares de Oryza sativa L y Solanum tuberosum L

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    Welbry Delince; Ramiro Valdés Carmenate; Olivia López Morgado; Fernando Guridi Izquierdo; María I. Balbín Arias

    2015-01-01

    Los procesos tecnológicos productivos donde se destacan el uso no controlado de agroquímicos contribuyen a que exista alto riesgo y vulnerabilidad en los agroecosistemas. Frente a esta problemática se establece como objetivo determinar los contenidos de Cu, Ni, Cd y Pb en el cultivo de papa (Solanum tuberosum L.) en condiciones de producción y de Cu, Zn y Pb en arroz (Oryza sativa L.) en condiciones semicontroladas; así como algunos indicadores bioquímicos-fisiológicos y la evaluación agroeco...

  1. UTILIZACIÓN DE UNA NUEVA METODOLOGÍA PARA LA EVALUACIÓN DE ARROZ (Oryza sativa L. ANTE LA INFECCIÓN PRODUCIDA POR EL HONGO Pyricularia grisea

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    Regla M. Cárdenas

    2000-01-01

    Full Text Available Se evaluó la resistencia de varias líneas y varieda- des de arroz frente a la infección producida por el hongo Pyricularia grisea, agente causal de la enfermedad conocida como Piriculariosis de gran importancia a escala mundial. Se empleó una nueva metodología de campo utilizada por el Cen- tro Internacional de Agricultura Tropical (CIAT, la cual pro- pone realizar las evaluaciones en un sitio donde exista una alta diversidad genética del patógeno y una elevada presión del inóculo. El trabajo se desarrolló en la granja Caribe pertene- ciente al Complejo Agroindustrial Arrocero” Los Palacios” en Pinar del Río, donde la enfermedad es uno de los factores que limitan la producción. Los resultados mostraron un total de ocho líneas y variedades resistentes en la primera evaluación para el estado de plántula y siete en la segunda para ese mismo estado. Todos los materiales evaluados como resistentes en hoja para el estado de plántula resultaron ser susceptibles a la enfermedad en la panícula. No existió correlación entre las eva- luaciones realizadas en hojas y en la panícula.

  2. APLICACIÓN DE UN FERTILIZANTE ENRIQUECIDO CON SILICIO Y MATERIA ORGÁNICA EN ARROZ (Oryza sativa L. CULTIVADO EN IBAGUÉ Y EL GUAMO ( TOLIMA, COLOMBIA APPLICATION OF AN ENRICHED FERTILIZER WITH SILICON AND ORGANIC MATTER IN THE YIELD OF RICE (Oryza sativa L. SOWED IN IBAGUÉ AND EL GUAMO ( TOLIMA, COLOMBIA

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    Javier Giovanni Alvarez Herrera

    2008-12-01

    Full Text Available Este trabajo tuvo como objetivo evaluar el efecto de diferentes dosis y épocas de aplicación de un suplemento fertilizante enriquecido con silicio, materia orgánica y elementos menores en el cultivo de arroz variedad Fedearroz 50. El diseño experimental fue completamente al azar con factorial de 2 dosis (20 y 40 kg•ha-1 y 5 combinaciones de época y dosis de aplicación (100% Presiembra, 50% Presiembra + 50% 1ª abonada, 100% a la 1ª abonada, 50% Presiembra + 50% 2ª abonada, 100% a la 2ª abonada comparados contra un testigo comercial ( 40 kg de SiO2 y un testigo tradicional de la zona. Las aplicaciones en segunda abonada del fertilizante generaron un incremento en el numero de panículas. Se encontró que un mayor numero de panículas correlaciona con un menor numero de espiguillas llenas y un mayor porcentaje de vaneamiento, aunque este se vió disminuido con aplicaciones tempranas del fertilizante y factores climáticos. En la localidad de El Guamo la dosis de fertilizante más adecuada fue de 20 kg en primer abonada con rendimientos de 6906 kg•ha-1de arroz paddy, mientras que en Ibagué con 40 kg en segunda abonada se obtuvieron rendimientos de 9270 kg•ha-1. El modelo matemático sugiere que aplicaciones de 66,9 kg•ha-1 del fertilizante para la localidad de Ibagué incrementaran la producción de arroz a 8876 kg•ha-1en promedio.The experiment was developed in two localities and its objective was evaluate the effect of different doses and times of application of a suplement fertilizer enriched with organic matter, silicon and microelements in the rice variety Fedearroz 50. The experimental design was completely at random with factorial of 2 doses (20 and 40 kg•ha-1 and 5 combinations of time and doses of application (100 % Preseed, 50 % Preseed + 50 % to Preflood, 100 % preflood, 50 % Preseed + 50 % midseason, 100 % to midseason compared against a commercial witness ( 40 kg of SiO2 and a productive witness. The applications

  3. Assistência de ar e volumes de aplicação na deposição de calda e no controle do arroz vermelho (Oryza sativa L. Air assistance and volume of application in spray deposition and in red rice control (Oryza sativa L.

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    Leopoldo L. S. Vigano

    2007-12-01

    Full Text Available O trabalho teve como objetivo avaliar o efeito da assistência de ar junto à barra pulverizadora e de três volumes de pulverização na dessecação e deposição da calda em arroz vermelho, sob cultivo de nabo forrageiro, em áreas de recuperação de várzeas, utilizando o herbicida paraquat e o corante Azul Brilhante, respectivamente. Os volumes de pulverização foram 100; 200 e 300 L ha-1 da solução aquosa, contendo corante alimentício (1.500 mg L-1. Com ou sem a assistência de ar junto à barra, foram utilizadas pontas de pulverização de jato plano tipo AXI 110015 à pressão de 117,3 kPa, AXI 11002 e AXI 11003 a 276 kPa. A avaliação da deposição da pulverização deu-se em folhas de plantas de arroz vermelho. Os maiores volumes (200 e 300 L ha-1 pulverizados com a assistência de ar junto à barra pulverizadora proporcionaram maiores depósitos do corante em relação ao volume de 100 L ha-1. Não foram constatadas diferenças na deposição do corante para os volumes pulverizados, sem a assistência de ar junto à barra, tampouco entre os volumes de 200 e 300 L ha-1 com a assistência de ar junto à barra. As maiores percentagens de controle do arroz vermelho foram obtidas com a assistência de ar junto à barra, independentemente do volume pulverizado, equivalendo-se ao controle obtido com 300 L ha-1, sem o uso dessa tecnologia.The aim of this research was to evaluate the effect of air-assistance on spraying at three volumes in spray deposition and control of red rice under fodder radish cultivation. To evaluate the control of this weed and spray deposition were used paraquat herbicide and a Brilliant Blue dye, respectively. The three spraying volumes were 100, 200 and 300 L ha-1, using a tracer dye at 1,500 mg L-1. Both solutions and volumes were sprayed with flat fan nozzles AXI 110015 at 117.3 kPa, AXI 11002 and AXI 11003 at 276 kPa, respectively, with and without air-assistance on the boom. The evaluation of deposition

  4. INFLUENCIA DE LA TEMPERATURA AMBIENTAL Y LA FECHA DE SIEMBRA SOBRE LA DURACIÓN DE LAS FASES FENOLÓGICAS EN CUATRO CULTIVARES DE ARROZ (Oryza sativa L.

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    Lázaro A. Maqueira López

    2016-01-01

    Full Text Available La investigación se desarrolló en áreas de la Unidad Científico-Tecnológica de Base “Los Palacios” (UCTB en la provincia de Pinar del Río, perteneciente al Instituto Nacional de Ciencias Agrícolas. Se utilizaron dos cultivares de ciclo corto (INCA LP-5 y Reforma y dos cultivares de ciclo medio (INCA LP-2 y J-104, los cuales se sembraron en cuatro fechas de siembra (enero-2004, diciembre-2004, febrero-2005 y enero-2006 en la campaña de frío, sobre un suelo Hidromórfico Gley Nodular Ferruginoso Petroférrico. El objetivo fue determinar la influencia de la temperatura ambiental y la fecha de siembra en la variación de las fases fenológicas de cuatro cultivares de arroz. Se utilizó un diseño experimental de bloques al azar con cuatro réplicas. Atendiendo a los resultados, se puede concluir que la mayor duración de la fase vegetativa y reproductiva se encontró en las fechas de diciembre-2004 y enero-2006, lo que se corresponde con los valores más bajos de temperatura informados en el trabajo. La temperatura acumulada necesaria para poder completar el ciclo biológico de los cultivares INCA LP-5, Reforma e INCA LP-2 está comprendida en un rango de 1900 a 2150 ºC, mientras que para J-104 es de 2200 a 2260 ºC. Los mayores rendimientos se corresponden con la mayor duración de la fase reproductiva para todos los cultivares estudiados.

  5. Methodical characterization of rice ( Oryza sativa bran oil from Pakistan

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    Mahmood, Zahid

    2005-06-01

    for the establishment of a globalized database of this valuable crop.El contenido de aceite, extraído con hexano, del salvado de cuatro variedades de arroz (Oryza sativa viz. Super Kernel, 386, 385 y Basmati, varió entre el 14.70 y el 19.10 %. Otros parámetros físicos y químicos de los aceites extraídos fueron respectivamente: Indice de yodo: 112.40, 109.80, 105.1 y 103.70; índice de refracción ( 40 °C : 1.4650, 1.4680, 1.4657 y 1.4660; densidad ( 40 °C 0.919, 0.913, 0.909 y 0.911; índice de saponificación: 183, 177, 186 y 190; insaponificable: 6.15, 5.60, 4.98 y el 5.40 %. Los tocoferoles ( α, γ, δ en los aceites fueron, respectivamente: 284.00, 175.12, 180.42, 300.06; 83.40, 98.70, 120.70, 90.60; 75.16, 57.20, 39.32 y 83.00 mg/kg. El contenido de tocotrienoles ( α, γ, δ en los aceites fue: 120.30, 106.00, 95.20, 135.74; 196.00, 125.00, 210.0, 276.41; 72.50, 20.00, 39.30 y 64.00 mg/kg, respectivamente. En los aceites estudiados se encontró una concentración de γ -oryzanol que varió entre 415.12 y 802.05 µg/g . Los periodos de inducción (Rancimat, 20 L/h, 120 °C de los aceites crudos fueron 6.81, 5.99, 6.39 y 7.40 h, respectivamente. Las fracciones principales de esteroles en los aceites se componían de: campesterol (10.10-19.20 %, stigmasterol (14.00-19.28 %, b -sitosterol (49.30-58.20 % y Δ5 ,avenasterol (8.14-13.05 %. Las variedades investigadas ( Super Kernel, 386, 385 and Basmati de aceite de salvado de arroz contenían elevados niveles de acido oleico 42.67, 38.59, 40.68 y 36.78 % seguido por los ácidos linoleico y palmítico 31.58, 33.80, 28.70, 30.51; 17.00, 14.88, 19.63 y 20.00 %, respectivamente. Los contenidos en ácidos mirístico, esteárico y araquídico fueron 1.50, 2.02, 4.28, 1.00; 2.64, 2.87, 4.02, 7.48; 1.28, 3.00, 1.00 y 1.00 % resp

  6. Construction of Oryza Sativa genome contigs by fingerprint strategy

    Institute of Scientific and Technical Information of China (English)

    TAOQUAZHOU; GUOFANHONG; 等

    1995-01-01

    We described the construction of BAC contigs of the genome of a indica variety of Oryza sativa.Guang Lu Ai 4. An entire representative(Sixfold coverage of rice chromosomes)and genetically stable BAC library of rice genome constructed in this lab has been systematically analysed by restriction enzyme fragmentation and polyacrylamide gel electrophoresis.And all the images thus obtained were subject to image-processing,which consisted of preliminary location of bands,cooperative tracking of lanes by correlation of adjacent bads.a precise densitometric pass,alignment at the marker bands with the standard,optional interactive editing,and normalization of the accepted bands.The contigs were generated based on the Computer Software specially designed for genome mapping.The number of contigs with 600 kb in length on average was 464.of contigs with 1000kb in length on average was 107; of contigs with 1500 kb in length on average was Construction of Oryza Sativa genome contigs.23.Therefor,all the contigs we have obtained ampunted up to 420 megabases in length.Considering the size of rice genome(430 megabased),the contigs generated in this lab have covered nearly 98% of the rice genome.We are now in the process of mapping the contigs to chromosomes.

  7. Oxygen dynamics in submerged rice (Oryza sativa L.)

    DEFF Research Database (Denmark)

    Colmer, Timothy D.; Pedersen, Ole

    2008-01-01

    Complete submergence of plants prevents direct O2 and CO2 exchange with air. Underwater photosynthesis can result in marked diurnal changes in O2 supply to submerged plants. Dynamics in pO2 had not been measured directly for submerged rice (Oryza sativa), but in an earlier study, radial O2 loss...... from roots showed an initial peak following shoot illumination.  O2 dynamics in shoots and roots of submerged rice were monitored during light and dark periods, using O2 microelectrodes. Tissue sugar concentrations were also measured.  On illumination of shoots of submerged rice, pO2 increased rapidly...... of magnitude higher than in darkness, enhancing also pO2 in roots.The initial peak in pO2 following illumination of submerged rice was likely to result from high initial rates of net photosynthesis, fuelled by CO2 accumulated during the dark period. Nevertheless, since sugars decline with time in submerged...

  8. Efectividad biológica delazoxystrobin para el control de pyricularia oryzae cav. y cercospora oryzae miyake. en arroz de temporal en Veracruz, México

    Directory of Open Access Journals (Sweden)

    Enrique Becerra

    2001-01-01

    Full Text Available El estado de Veracruz, México, siembra anualmente 22000 ha de arroz de temporal con un rendimiento medio de 3,5 t/ha, debido principalmente a problemas de sequía lo cual favorece la presencia de hongos como Pyricularia oryzae Cav. (quema del arroz y Cercospora oryzae Miyake. (Mancha angosta. Con el objeto de conocer el comportamiento de nuevos fungicidas se evaluó la eficacia del Azoxystrobin en el control de estos hongos. El experimento se estableció en el municipio de Tres Valles, Veracruz, durante el temporal de 1999, con semilla de Milagro Filipino Depurado. El diseño estadístico utilizado fue bloques al azar con cuatro repeticiones. Los tratamientos evaluados fueron: Azoxystrobin a 0,2, 0,4 y 0,6 l/ha vs Tecto60 a 0,5 kg/ha y un testigo sin aplicación. Estos fueron aplicados al presentarse los primeros síntomas de las enfermedades. Se evaluó la incidencia, número de lesiones en 20 plantas, índice de intensidad, el rendimiento de grano y fitotoxicidad. Se encontró que el Azoxystrobin obtuvo mejores resultados que el Tecto 60 y éste a su vez que el testigo no tratado. El mejor control para P. oryzae y C. oryzae y el mayor rendimiento de grano (4432 kg/ha se logró cuando se aplicó Azoxystrobin en dosis de 0,6 l/ha, aunque con 0,2 y 0,4 l/ha de este fungicida tuvo un buen control de estas enfermedades. Ninguno de los fungicidas causó toxicidad al arroz

  9. Resistência de cultivares de arroz a Rhizoctonia solani e Rhizoctonia oryzae Resistance of rice cultivars to Rhizoctonia solani and Rhizoctonia oryzae

    Directory of Open Access Journals (Sweden)

    Anne Sitarama Prabhu

    2002-05-01

    Full Text Available Isolados de Rhizoctonia solani e Rhizoctonia oryzae, agentes causais da queima-da-bainha e mancha-da-bainha, respectivamente, foram coletados em lavouras de arroz irrigado no Estado do Tocantins. O objetivo deste trabalho foi avaliar a resistência de 12 cultivares de arroz a essas doenças, sob condições artificiais de inoculação, em casa de vegetação. Não houve correlação entre resistência das cultivares a R. oryzae e R. solani quanto ao comprimento da lesão na bainha infectada pelo método de palito de dentes. A relação entre tamanho da lesão na bainha e folha foi linear e significativamente negativa (r = -0,66, PIsolates of Rhizoctonia solani and Rhizoctonia oryzae, the causal agents of sheath blight and sheath rot diseases, respectively, were collected from irrigated rice fields in the State of Tocantins, Brazil. The main objective of the investigation was to assess the resistance of 12 genotypes to these diseases, under artificial inoculation tests in greenhouse condition. There was no correlation between the resistance of cultivars to R. oryzae and R. solani for lesion extension on sheath infection obtained by the toothpick method. The relationship between lesion size on sheath and leaf was linear and significantly negative (r = -0.66, P<=0.05, thereby indicating that there is no relationship between resistance of sheath and leaf to infection by R. solani in rice cultivars. Among the early maturing genotypes Labelle was highly susceptible in all methods of inoculation. The area under disease progress curve based on lesion height on the culm and the inoculation method with rice husk and grain were found more adequate for determining the differences in the degree of resistance among cultivars. Leaves exhibited resistance to infection by R. oryzae in inoculation tests with mycelial discs.

  10. Development and Identification of Introgression Lines from Cross of Oryza sativa and Oryza minuta

    Institute of Scientific and Technical Information of China (English)

    GUO Si-bin; WEI Yu; LI Xiao-qiong; LIU Kai-qiang; HUANG Feng-kuan; CHEN Cai-hong; GAO Guo-qing

    2013-01-01

    Introgression line population is effectively used in mapping quantitative trait loci (QTLs),identifying favorable genes,discovering hidden genetic variation,evaluating the action or interaction of QTLs in multiple conditions and providing the favorable experimental materials for plant breeding and genetic research.In this study,an advanced backcross and consecutive selfing strategy was used to develop introgression lines (ILs),which derived from an accession of Oryza minuta (accession No.101133) with BBCC genome,as the donor,and an elite indica cultivar IR24 (O.sativa),as the recipient.Introgression segments from O.minuta were screened using 164 polymorphic simple sequence repeat (SSR) markers in the genome of each IL.Introgressed segments carried by 131 ILs covered the whole O.sativa genome.The average number of homozygous O.minuta segments per introgression line was about 9.99.The average length of introgressed segments was approximate 14.78 cM,and about 79.64%of these segments had sizes less than 20 cM.In the genome of each introgression line,the O.minuta chromosomal segments harbored chromosomal fragments of O.sativa ranging from 1.15% to 27.6%,with an overall average of 8.57%.At each locus,the ratio of substitution of O.minuta alleles had a range of 1.5%-25.2%,with an average of 8.3% Based on the evaluation of the phenotype of these ILs,a wide range of alterations in morphological and yield-related traits were found.After inoculation,ILs 41,11 and 7 showed high resistance to bacterial blight,brown planthopper and whitebacked planthopper,respectively.These O.minuta-O.sativa ILs will serve as genetic materials for identifying and using favorable genes from O.minuta.

  11. Molecular Cytogenetic Analysis of Spontaneous Interspecific Hybrid Between Oryza sativa and Oryza minuta

    Institute of Scientific and Technical Information of China (English)

    YI Chuan-deng; CHENG Xu; WANG Bei-bei; LIANG Guo-hua; GONG Zhi-yun; TANG Shu-zhu; GU Ming-hong

    2008-01-01

    Genomic in situ hybridization (GISH) is a powerful tool to characterize parental chromosomes in interspecific hybrids, including the behaviour of autosynapsis and chromosome paidng. It was used to distinguish the chromosomes of Oryza sativa from wild species in a spontaneous interspecific hybdd and to investigate the chromosome pairing at metaphase I in meiosis of the hybdd in this study. The hybrid was a triploid with 36 chromosomes according to the chromosome nurnber investigated in mitosis of root tips. During metaphase I of meiosis in the hybrid, less chromosome pairing was observed and most of the chromosomes existed as univalent. Based on GISH and FISH (Fluorescent in situ hybridization) analyses, the chromosomes of the hybrid were composed of genomes A, B and C. Thus, it was believed that the hybrid was the result of natural hybridization between cultivated rice and wild species O. minuta which was planted in experimental fields.

  12. Analyses of Old Prokaryotic Proteins Indicate Functional Diversification in Arabidopsis and Oryza sativa

    Directory of Open Access Journals (Sweden)

    Anupama eSingh

    2016-03-01

    Full Text Available During evolution, various processes such as duplication, divergence, recombination and many other events leads to the evolution of new genes with novel functions. These evolutionary events, thus significantly impact the evolution of cellular, physiological, morphological and other phenotypic trait of organisms. While evolving, eukaryotes have acquired large number of genes from the earlier prokaryotes. This work is focused upon identification of old prokaryotic proteins in Arabidopsis and Oryza sativa genome, further highlighting their possible role(s in the two genomes. Our results suggest that with respect to their genome size, the fraction of old prokaryotic proteins is higher in Arabidopsis than in Oryza sativa. The large fractions of such proteins encoding genes were found to be localized in various endo-symbiotic organelles. The domain architecture of the old prokaryotic proteins revealed similar distribution in both Arabidopsis and Oryza sativa genomes showing their conserved evolution. In Oryza sativa, the old prokaryotic proteins were more involved in developmental processes, might be due to constant man-made selection pressure for better agronomic traits/productivity. While in Arabidopsis, these proteins were involved in metabolic functions. Overall, the analysis indicates the distinct pattern of evolution of old prokaryotic proteins in Arabidopsis and Oryza sativa.

  13. Monitoring homologous recombination in rice (Oryza sativa L.)

    Energy Technology Data Exchange (ETDEWEB)

    Yang Zhuanying; Tang Li [Guangdong Provincial Key Lab of Biotechnology for Plant Development, College of Life Sciences, South China Normal University, Guangzhou 510631 (China); Li Meiru [South China Botanic Garden, Chinese Academy of Sciences, Guangzhou 510650 (China); Chen Lei; Xu Jie [Guangdong Provincial Key Lab of Biotechnology for Plant Development, College of Life Sciences, South China Normal University, Guangzhou 510631 (China); Wu Goujiang [South China Botanic Garden, Chinese Academy of Sciences, Guangzhou 510650 (China); Li Hongqing, E-mail: hqli@scnu.edu.cn [Guangdong Provincial Key Lab of Biotechnology for Plant Development, College of Life Sciences, South China Normal University, Guangzhou 510631 (China)

    2010-09-10

    Here we describe a system to assay homologous recombination during the complete life cycle of rice (Oryza sativa L.). Rice plants were transformed with two copies of non-functional GUS reporter overlap fragments as recombination substrate. Recombination was observed in all plant organs examined, from the seed stage until the flowering stage of somatic plant development. Embryogenic cells exhibited the highest recombination ability with an average of 3 x 10{sup -5} recombination events per genome, which is about 10-fold of that observed in root cells, and two orders of that observed in leaf cells. Histological analysis revealed that recombination events occurred in diverse cell types, but preferentially in cells with small size. Examples of this included embryogenic cells in callus, phloem cells in the leaf vein, and cells located in the root apical meristem. Steady state RNA analysis revealed that the expression levels of rice Rad51 homologs are positively correlated with increased recombination rates in embryogenic calli, roots and anthers. Finally, radiation treatment of plantlets from distinct recombination lines increased the recombination frequency to different extents. These results showed that homologous recombination frequency can be effectively measured in rice using a transgene reporter assay. This system will facilitate the study of DNA damage signaling and homologous recombination in rice, a model monocot.

  14. Systematic analysis of rice (Oryza sativa) metabolic responses to herbivory.

    Science.gov (United States)

    Alamgir, Kabir Md; Hojo, Yuko; Christeller, John T; Fukumoto, Kaori; Isshiki, Ryutaro; Shinya, Tomonori; Baldwin, Ian T; Galis, Ivan

    2016-02-01

    Plants defend against attack from herbivores by direct and indirect defence mechanisms mediated by the accumulation of phytoalexins and release of volatile signals, respectively. While the defensive arsenals of some plants, such as tobacco and Arabidopsis are well known, most of rice's (Oryza sativa) defence metabolites and their effectiveness against herbivores remain uncharacterized. Here, we used a non-biassed metabolomics approach to identify many novel herbivory-regulated metabolic signatures in rice. Most were up-regulated by herbivore attack while only a few were suppressed. Two of the most prominent up-regulated signatures were characterized as phenolamides (PAs), p-coumaroylputrescine and feruloylputrescine. PAs accumulated in response to attack by both chewing insects, i.e. feeding of the lawn armyworm (Spodoptera mauritia) and the rice skipper (Parnara guttata) larvae, and the attack of the sucking insect, the brown planthopper (Nilaparvata lugens, BPH). In bioassays, BPH insects feeding on 15% sugar solution containing p-coumaroylputrescine or feruloylputrescine, at concentrations similar to those elicited by heavy BPH attack in rice, had a higher mortality compared to those feeding on sugar diet alone. Our results highlight PAs as a rapidly expanding new group of plant defence metabolites that are elicited by herbivore attack, and deter herbivores in rice and other plants.

  15. Fe deficiency induced changes in rice (Oryza sativa L.) thylakoids.

    Science.gov (United States)

    Wang, Yuwen; Xu, Chao; Li, Kang; Cai, Xiaojie; Wu, Min; Chen, Guoxiang

    2017-01-01

    Iron deficiency is an important abiotic stress that limits productivity of crops all over the world. We selected a hybrid rice (Oryza sativa L.), LYPJ, which is super high-yield and widely cultured in China, to investigate changes in the components and structure of thylakoid membranes and photosynthetic performance in response to iron deficiency. Our results demonstrated that photosystem I (PSI) is the primary target for iron deficiency, while the changes in photosystem II (PSII) are important for rebuilding a balance in disrupted energy utilization and dissipation caused by differential degradation of photosynthetic components. The result of immunoblot analysis suggested that the core subunit PsaA declined drastically, while PsbA remained relatively stable. Furthermore, several organizational changes of the photosynthetic apparatus were found by BN-PAGE, including a marked decrease in the PSI core complexes, the Cytb 6 /f complex, and the trimeric form of the LHCII antenna, consistent with the observed unstacking grana. The fluorescence induction analysis indicated a descending PSII activity with energy dissipation enhanced markedly. In addition, we proposed that the crippled CO2 assimilation could be compensated by the enhanced of phosphoenolpyruvate carboxylase (PEPC), which is suggested by the decreased ribulose-1,5-bisphosphate carboxylase/oxygenase (RuBisCO) and photosynthetic efficiency.

  16. The WRKY Gene Family in Rice (Oryza sativa)

    Institute of Scientific and Technical Information of China (English)

    Christian A. Ross; Yue Liu; Qingxi J. Shen

    2007-01-01

    WRKYgenes encode transcription factors that are involved in the regulation of various biological processes. These zinc-finger proteins, especially those members mediating stress responses, are uniquely expanded in plants. To facilitate the study of the evolutionary history and functions of this supergene family, we performed an exhaustive search for WRKY genes using HMMER and a Hidden Markov Model that was specifically trained for rice. This work resulted in a comprehensive list of WRKY gene models in Oryza sativa L. ssp. indica and L. ssp. japonica. Mapping of these genes to individual chromosomes facilitated elimination of the redundant, leading to the identification of 98 WRKY genes in japonica and 102 in indica rice. These genes were further categorized according to the number and structure of their zinc-finger domains. Based on a phylogenetic tree of the conserved WRKY domains and the graphic display of WRKY loci on corresponding indica and japonica chromosomes, we identified possible WRKY gene duplications within, and losses between the two closely related rice subspecies. Also reviewed are the roles of WRKY genes in disease resistance and responses to salicylic acid and jasmonic acid, seed development and germination mediated by gibberellins, other developmental processes including senescence, and responses to abiotic stresses and abscisic acid in rice and other plants. The signaling pathways mediating WRKY gene expression are also discussed.

  17. Production of bacterial blight resistant lines from somatic hybridization between Oryza sativa L. and Oryza meyeriana L.

    Institute of Scientific and Technical Information of China (English)

    严成其; 钱凯先; 薛刚平; 吴忠长; 陈跃磊; 颜秋生; 张雪琴; 吴平

    2004-01-01

    Novel bacterial blight (BB) resistance gene(s) for rice was (were) introduced into a cultivated japonica rice variety Oryza sativa (cv. 8411), via somatic hybridization using the wild rice Oryza meyeriana as the donor of the resistance gene(s). Twenty-nine progenies of somatically hybridized plants were obtained. Seven somatically hybridized plants and their parents were used for AFLP (amplified fragment length polymorphism) analysis using 8 primer pairs. Results confirmed that these plants were somatic hybrids containing the characteristic bands of both parents. The morphology of the regenerated rice showed characters of both O.sativa and O.meyeriana. Two somatic hybrids showed highest BB resistance and the other 8 plants showed moderate resistance. The new germplasms with highest resistance have been used in the rice breeding program for the improvement of bacterial blight resistance.

  18. Production of bacterial blight resistant lines from somatic hybridization between Oryza sativa L.and Oryza meyeriana L.

    Institute of Scientific and Technical Information of China (English)

    严成其; 钱凯先; 薛刚平; 吴忠长; 陈跃磊; 颜秋生; 张雪琴; 吴平

    2004-01-01

    Novel bacterial blight (BB) resistance gene(s) for rice was (were) introduced into a cultivated japonica rice variety Oryza sativa (cv. 8411), via somatic hybridization using the wild rice Oryza meyeriana as the donor of the resistance gene(s). Twenty-nine progenies of somatically hybridized plants were obtained. Seven somatically hybridized plants and their parents were used for AFLP (amplified fragment length polymorphism) analysis using 8 primer pairs. Results confirmed that these plants were somatic hybrids containing the characteristic bands of both parents. The morphology of the regenerated rice showed characters of both O. sativa and O. meyeriana. Two somatic hybrids showed highest BB resistance and the other 8 plants showed moderate resistance. The new germplasms with highest resistance have been used in the rice bfeeding program for the improvement of bacterial blight resistance.

  19. Characterization of interspecific hybrids and backcross progenies from a cross between Oryza minuta and Oryza sativa

    Institute of Scientific and Technical Information of China (English)

    2009-01-01

    Oryza minuta, a tetraploid wild relative of cultivated rice, is an important source for the genetic improvement. Interspecific hybrids were obtained from the cross of O. sativa L. (IR24) and O. minuta (Acc. No. 101133) with 5.58% crossability, which ranged from 0.11% to 1.62% in the backcross generations. The chromosome numbers of the backcross progenies were 24 to 48. Seven yield-related traits of the parents, hybrid F1, and backcross progenies were evaluated. Simple sequence repeat markers analysis showed that the polymorphism ratio of SSR bands between IR24 and Acc. No. 101133 was 93.2%. The average donor segment number, length, donor genome size, and percentage of donor genome of 92 BC3F1 plants (2n=24) were 24.1, 17.8 cM, 438.4 cM and 26.2%, respectively. They were complex variation and uneven among the chromosomes. These introgression lines could be used to identify the favorable genes of O. minuta and provide a new platform for the genetic improvement of cultivated rice.

  20. Construction of six Oryza sativa x O. rufipogon Chromosome Segment Substitution Line (CSSL) Libraries

    Science.gov (United States)

    Transgressive variation has been observed in rice (Oryza sativa) as an increase in grain yield and attributed to the ancestral parent, O. rufipogon, in mapping populations developed from several adapted rice varieties crossed with a single O. rufipogon accession. To explore this phenomenon of transg...

  1. Organic anion exudation by lowland rice (Oryza sativa L.) at zinc and phosphorus deficiency

    NARCIS (Netherlands)

    Hoffland, E.; Wei, C.Z.; Wissuwa, M.

    2006-01-01

    The objectives of this paper were to determine (1) if lowland rice (Oryza sativa L.) plants respond similarly to low zinc (Zn) and phosphorus (P) availability by increased root exudation of low-molecular weight organic anions (LMWOAs) and (2) if genotypic variation in tolerance to low soil supply of

  2. Triterpenoid glycosides from Medicago sativa as antifungal agents against Pyricularia oryzae.

    Science.gov (United States)

    Abbruscato, Pamela; Tosi, Solveig; Crispino, Laura; Biazzi, Elisa; Menin, Barbara; Picco, Anna M; Pecetti, Luciano; Avato, Pinarosa; Tava, Aldo

    2014-11-19

    The antifungal properties of saponin mixtures from alfalfa (Medicago sativa L.) tops and roots, the corresponding mixtures of prosapogenins from tops, and purified saponins and sapogenins against the causal agent of rice blast Pyricularia oryzae isolates are presented. In vitro experiments highlighted a range of activities, depending upon the assayed metabolite. The antifungal effects of the most promising prosapogenin mixture from alfalfa tops were confirmed by means of in planta tests using three different Italian cultivars of rice (Oryza sativa L. ssp. japonica), known to possess high, medium, and low blast resistance. The evidenced antifungal properties of the tested metabolites allowed some considerations on their structure-activity relationship. Results indicate that prosapogenins are active compounds to prevent the fungal attack of P. oryzae on different rice cultivars. Therefore, if properly formulated, these substances could represent a promising and environmentally friendly treatment to control rice blast.

  3. Aplicação tardia de glyphosate e estande e desenvolvimento inicial do arroz em sistema de cultivo mínimo Delayed application of glyphosate and stand and initial growth of rice plants (Oryza sativa under a minimum tillage system

    Directory of Open Access Journals (Sweden)

    C.A.C. Crusciol

    2002-04-01

    Full Text Available O controle de plantas daninhas na cultura do arroz é ainda um problema, mesmo em cultivo mínimo, em razão do revolvimento do solo na linha de semeadura, que proporciona o reaparecimento de infestantes. Assim, objetivou-se estudar o efeito do atraso da aplicação de glyphosate sobre a formação do estande e o desenvolvimento inicial das plantas de arroz cv. IAC 102 irrigado por inundação. O experimento foi conduzido sob túnel plástico, em caixas d'água de 500 L, contendo NEOSSOLO FLÚVICO Ta Eutrófico. O delineamento experimental foi o de blocos casualizados, com quatro repetições. Os tratamentos consistiram da aplicação de glyphosate: seis horas antes da semeadura do arroz (testemunha; no início da emergência; três dias após a emergência; e seis dias após, sem e com lâmina d'água. A dose do herbicida foi de 1.920 g i.a. ha-1. Para todas as variáveis analisadas houve efeito significativo dos tratamentos; aos 42 dias após a emergência, constatou-se que a testemunha foi estatisticamente superior, na formação do estande, na altura de plantas, no comprimento de raiz e na massa seca das partes aérea e de raiz, aos demais tratamentos em que ocorreram atrasos na aplicação do glyphosate.Weed control is still one of the most important problems of rice production, even under a reduced-tillage system. The purpose of this research was to study the effect of delayed application of glyphosate on paddy rice cv. IAC 102. The experiment was conducted under plastic tunnels with rice plants growing in water tanks of 500 liters of capacity, containing Alluvial soil. Treatments consisted of glyphosate application on the soil surface six hours before sowing, (control at seedling emergence, three days after, and six days after, combined or not with water flooding. The experimental design was a randomized block with four replications and the herbicide dosage was 1,920 g a.i. ha-1. There was a significant effect of the treatments on the

  4. Polihidroxialcanoatos de cepas de Azospirillum spp. aisladas de raíces de Lycopersicon esculentum Mill. “tomate” y Oryza sativa L. “arroz” en Lambayeque

    Directory of Open Access Journals (Sweden)

    Katty Baca

    2010-01-01

    Full Text Available En este trabajo se determinó la concentración de polihidroxialcanoatos (PH As de cepas de Azospirillum aisladas de raíces de Lycopersicon esculentum Mill. “tomate” y Oryza sativa L. “arroz”, como una alternativa ante la acumulación de plásticos derivados del petróleo. R aíces previamente desinfectadas se sembraron en medio Nfb se misólido, donde las bacterias fijadoras de nitrógeno se reconocieron por una película blanquecina bajo la superficie y el viraje del indicador al azul. El género Azospirillum se identificó en medio rojo de Congo, obteniéndose 96 cepas de A. lipoferum y A. brasilense en tomate y arroz. Se realizó una fermentación discontinua con caldo Azotobacter modificado, alimentando con una solución saturada de ácido málico cada 12 horas y se realizaron tinciones con Sudán Negro B. Se seleccionaron las cepas con mayor nú mero de gránulos de PHAs (en tomate , 18 de A. lipoferum y 2 de A. brasilense y en arroz, 10 de A. lipoferum y 10 de A. brasilense y se cuantificó la biomasa y PHAs. La concentración de PHAs alcanzó 0 . 661 gL - 1 en A. lipoferum KM(T - 73 y 0 . 738 gL - 1 en A. br asilense KM(T - 19. Las cepas de A. lipoferum y A. brasilense aisladas de tomate alcanzaron una mayor concentración de biomasa y PHAs frente a las cepas aisladas de arroz.

  5. The transfer RNA genes in Oryza sativa L.ssp.indica

    Institute of Scientific and Technical Information of China (English)

    WANG; Xiyin(王希胤); SHI; Xiaoli(史晓黎); HAO; Bailin(郝柏林)

    2002-01-01

    The availability of the draft genome sequence of Oryza sativa L. ssp. indica has made it possible to study the rice tRNA genes. A total of 596 tRNA genes, including 3 selenocysteine tRNA genes and one suppressor tRNA gene are identified in 127551 rice contigs. There are 45 species of tRNA genes and the revised wobble hypothesis proposed by Guthrie and Abelson is perfectly obeyed. The relationship between codon usage and the number of corresponding tRNA genes is discussed. Redundancy may exist in the present list of tRNA genes and novel ones may be found in the future. A set of 33 tRNA genes is discovered in the complete chloroplast genome of Oryza sativa L. ssp. indica. These tRNA genes are identical to those in ssp. japonica identified by us independently from the origional annotation.

  6. Tanggap Pertumbuhan dan Produksi Padi (Oryza sativa L.) Varietas Ciherang Terhadap Pemberian Pupuk Organik

    OpenAIRE

    Sari, Vira Irma

    2011-01-01

    VIRA IRMA SARI. Response of Growth and Production of Rice (Oryza sativa L.) Variety Ciherang to The Application of Organic Fertilizer. Scarcity of inorganic fertilizer and the negative effect caused by inorganic fertilizer continuing to make organic fertilizer as a solution to overcome these problems. The availability of organic fertilizers is expected that the farmers can get the optimal production and profit, because the organic fertilizer is cheaper and easy ...

  7. Esterase as molecular marker for salt tolerance in regenerated plants of rice, Oryza sativa L.

    Science.gov (United States)

    Swapna, T S

    2002-09-01

    Esterase variation was studied in plants regenerated from callus cultures of four rice (Oryza sativa) varieties, viz. pokkali, which is a moderately salt tolerant variety and three salt sensitive varieties MI 48, annapoorna and jyothi. Variation was studied at tillering stage of plants regenerated from callus culture and germinated from seeds. Somaclonal variants for salt tolerance could be detected using variation in esterase banding pattern and activity.

  8. Riesgo agroambiental por metales pesados en suelos con Cultivares de Oryza sativa L y Solanum tuberosum L

    Directory of Open Access Journals (Sweden)

    Welbry Delince

    2015-01-01

    Full Text Available Los procesos tecnológicos productivos donde se destacan el uso no controlado de agroquímicos contribuyen a que exista alto riesgo y vulnerabilidad en los agroecosistemas. Frente a esta problemática se establece como objetivo determinar los contenidos de Cu, Ni, Cd y Pb en el cultivo de papa (Solanum tuberosum L. en condiciones de producción y de Cu, Zn y Pb en arroz (Oryza sativa L. en condiciones semicontroladas; así como algunos indicadores bioquímicos-fisiológicos y la evaluación agroecológica del área con el cultivo de papa en la comunidad de Güines. Se determinaron los pigmentos fotosintéticos totales clorofila (a+b y carotenoides (μg·g-1, a los 40 días después de la siembra (DDS, el contenido de metales pesados (MP y la actividad de la enzima catalasa (EC 1.11.1.6 a los 60 DDS para el cultivar de arroz, mientras se evaluaron el contenido de MP en los diferentes órganos de la papa (tubérculos, hojas, tallos y en el suelo a los 95 DDP. Para el diagnóstico de los campos de producción de papa se utilizó metodología para el diagnóstico de áreas agrícolas con riesgo de contaminación por metales pesados. Se detectaron que poseen altos niveles de MP en sus órganos sin síntomas visibles de fitotoxicidad, así como en los suelos después de la cosecha, se consideran como cifras alertadores, por eso se han realizado talleres con participación de todos los actores sociales involucrados, implementándose un grupo de medidas (fitotécnicas, recuperativas, ambientales y capacitación que contribuyen a minimizar el riesgo de afectación.

  9. Simulação do dano causado por larvas de Oryzophagus oryzae (Coleoptera: Curculionidae a cultivares de arroz irrigado

    Directory of Open Access Journals (Sweden)

    Martins José Francisco da Silva

    2004-01-01

    Full Text Available Oryzophagus oryzae (Costa Lima, 1936 (Coleoptera: Curculionidae é a praga-chave da cultura do arroz irrigado na Região Sul do Brasil. As larvas causam os principais danos ao cortarem drasticamente as raízes das plantas. Dois experimentos sobre simulação do dano larval foram realizados testando um equipamento cujo componente principal é uma lâmina metálica em forma de U, para corte das raízes. Raízes das cultivares BR-Irga 414 e Bluebelle, de ciclo biológico curto, e suscetíveis ao inseto e BR-Irga 410 e Dawn, de ciclo médio e resistentes, foram submetidas aos tratamentos de (1 corte artificial, com o simulador, (2 corte natural, pelas larvas e (3 sem corte, artificial ou natural, protegidas com inseticida. A simulação foi praticada na fase vegetativa das plantas, 31 dias pós-irrigação por inundação, época do pico da população larval nas raízes. Avaliaram-se dados sobre comprimento, peso de matéria seca e volume de raízes, imediatamente após a aplicação do tratamento de simulação e na pré-emissão de panículas, população larval em plantas submetidas ao dano natural, e produtividade de grãos. Na avaliação efetuada imediatamente após a simulação, em todas as cultivares, não ocorreu diferença entre índices de dano às raízes resultantes do uso do simulador e da alimentação de larvas. Na fase de pré-emissão das panículas, os índices de recuperação do sistema radicular das plantas submetidas aos danos natural e artificial, também foram similares. As cultivares de ciclo médio apresentaram maior recuperação dos tecidos radiculares e menor perda de produtividade de grãos, confirmando o maior grau de resistência a O. oryzae. Concluiu-se que o método de simulação é aplicável em pesquisas sobre resistência de arroz ao inseto, principalmente na identificação de genótipos tolerantes.

  10. Diversity of the Ty-1 copia retrotransposon Tos17 in rice (Oryza sativa L.) and the AA genome of the Oryza genus

    OpenAIRE

    Petit, J.; Bourgeois, E; Stenger, W.; Bes, M.; Droc, G.; Meynard, D.; Courtois, B.; Ghesquière, Alain; Sabot, François; Panaud, O.; Guiderdoni, E.

    2009-01-01

    Retrotransposons are mobile genetic elements, ubiquitous in Eukaryotic genomes, which have proven to be major genetic tools in determining phylogeny and structuring genetic diversity, notably in plants. We investigate here the diversity of the Ty1-copia retrotransposon Tos17 in the cultivated rice of Asian origin (Oryza sativa L.) and related AA genome species of the Oryza genus, to contribute understanding of the complex evolutionary history in this group of species through that of the eleme...

  11. Evaluation of the ORYZA2000 Rice Growth Model under Nitrogen-Limited Conditions in an Irrigated Mediterranean Environment Evaluación del Modelo de Crecimiento de Arroz ORYZA2000 bajo Condiciones Limitadas de Nitrógeno en un Ambiente Mediterráneo Regado

    Directory of Open Access Journals (Sweden)

    Pamela Artacho

    2011-03-01

    Full Text Available ORYZA2000 is a growth model for tropical lowland rice ( Oryza sativa L. developed by the International Rice Research Institute and Wageningen University. This model has been evaluated extensively in a wide range of environments. However, reports examining japonica cultivars growing in temperate climates are scarce. In this study, ORYZA2000 was calibrated and evaluated using data from experiments carried out in the South-Central area of Chile. These experiments were performed on a japonica rice cultivar growing under an irrigated Mediterranean environment at various N rates. ORYZA2000 was then applied to explore potential yield and grain yield response to N fertilization under likely weather conditions in the major rice-producing area in Chile. ORYZA2000 was sufficiently accurate to simulate grain yield and crop N uptake at the end of the season. Final crop N uptake was simulated with a root mean squared error (RMSE of 20 kg ha-1 (15% and grain yield with a RMSE of 1666 kg ha-1 (19%. However, the prediction of biomass and N uptake of individual organs throughout the season was poor. A long-term simulation study confirmed a potential yield as high as 12 000 kg ha-1 in the Parral area, as well as the existence of a scope for yield increase. The yield response to N fertilization was predicted even at rates of 300 kg ha-1, although a significant probability of low yields was also observed. This trend supports the need to incorporate dynamic N management in Chilean rice production.ORYZA2000 es un modelo para arroz tropical regado desarrollado por el Instituto Internacional de Investigación en Arroz y Universidad de Wageningen, que ha sido evaluado en un amplio rango de ambientes. Sin embargo, los reportes para cultivares japónica creciendo en ambientes templados son escasos. En este estudio, ORYZA2000 fue calibrado y evaluado usando datos de experimentos realizados en el centro-sur de Chile, que incluyeron una variedad japónica cultivada bajo un

  12. N-glycan transition of the early developmental stage in Oryza sativa.

    Science.gov (United States)

    Horiuchi, Risa; Hirotsu, Naoki; Miyanishi, Nobumitsu

    2016-08-26

    N-Glycosylation is one of the post-translational modifications. In animals, N-glycans linked to proteins function in cell-cell recognition, sorting, transport, and other biological phenomena. However, in plants, N-glycan-mediated biological functions remain obscure. In a previous study, we showed that the main type of N-glycan transition is from the paucimannosidic to complex type before and after germination in Oryza sativa, suggesting that transitions of N-glycan, including those of glycoproteins and glycosyltransferases, are closely associated with plant growth. To further elucidate the relationship between N-glycan structure and plant growth, we analyzed the structures of N-glycans expressed in O. sativa seedlings grown under light conditions and performed comparative analyses of the structures in the shoot and root. The analyses show that fundamental N-glycan structures are common to the shoot and root, whereas paucimannosidic-type N-glycans dramatically decreased in the root grown under light conditions. Further, to investigate the effects of light on N-glycan structures in O. sativa seedlings, we analyzed N-glycan structures in O. sativa seedlings grown in the dark. Understandably, N-glycan expression in the root was almost unaffected by light. However, despite a marked difference in phenotype, N-glycan expression in the shoot was also unaffected by light. This result suggests that the shoot and root of O. sativa have different glycoproteins and distinct N-glycan synthetic systems. Thus, we propose that the N-glycan synthetic system of the O. sativa shoot is almost unaffected by light conditions and that many photosynthesis-related proteins are not modified by N-glycans.

  13. Selección preliminar de plantas de arroz con resistencia vertical A pyricularia oryzae Cav por inducción de mutaciones (ING

    Directory of Open Access Journals (Sweden)

    A Cruz

    2016-03-01

    Full Text Available Seeds of rice Oryza sativa L. cv. CR-1113 susceptible to blast disease Pyricularia oryzae Cav. Were subjected to gamma radiation with 60Co using doses of 15 and 20 krads to obtain and select mutant plants with vertical resistance to blast. A total of 80.000 rice plants per treatment were individually evaluated in the second mutant generation (M2 at tillering and panicle emergence. Vertical resistance was observed in 47 and 8 plants from the 15 and 20 krads treatments respectively.

  14. Effects of cadmium on enzymatic and non-enzymatic antioxidative defences of rice (Oryza sativa L.).

    Science.gov (United States)

    Yu, Fangming; Liu, Kehui; Li, Mingshun; Zhou, Zhenming; Deng, Hua; Chen, Bin

    2013-01-01

    The effects of 60-d cadmium (Cd) exposure on enzymatic and non-enzymatic antioxidative system of Oryza sativa L. seedlings at tillering stage were studied using soil culture experiment. Research findings showed that chlorophyll content of Oryza sativa L. declined with the increase in soil metal concentration. Cd pollution induced the antioxidant stress by inducing O2(-1) and H2O2, which increased in plants; at the same time, MDA as the final product of peroxidation of membrane lipids, accumulated in plant. The antioxidant enzyme system was initiated under the Cd exposure, i.e. almost all the activities of superoxide dismutase (SOD), peroxidase, catalase, glutathione peroxidase, and ascorbate peroxidase were elevated both in leaves and roots. The non-protein thiols including phytochelatins and glutathione to scavenge toxic free radicals caused by Cd stress was also studied. The contents of phytochelatins and glutathione were about 3.12-6.65-fold and 3.27-10.73-fold in leaves, against control; and the corresponding values were about 3.53-9.37-fold and 1.41-5.11-fold in roots, accordingly.

  15. Species-specific aminoacylation of Oryza sativa mitochondrial tRNATrp

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    Abstract The details of species- specific aminoacylation in Oryza sativa mitochondrial tRNATrp by bacterial and eukaryotic (cytoplasm) tryptophanyl-tRNA synthetases (TrpRS) were inves-tigated. Seven single or multiple mutations of three bases (G73, U72, A 68) were made in O. sativa mi-tochondrial tRNATrp to the corresponding nucleotides present in human tRNATrp. In vitro transcripts of these mutant genes were tryptophanylated by Bacillus subtilis and human tryptophanyl-tRNA synthetases (TrpRS), and the kinetic parameters were determined. The results showed that the aminoacylation of seven mutant transcripts by B. subtilis TrpRS was 53.33%―99.79% less efficient than that by wild-type O. sativa mitochondrial tRNATrp, but was 4―330 times more efficient than that by human TrpRS. The mutant MPH7 (G73, U72 and C68 in O. sativa mitochondrial tRNA were all replaced by the counterpart residues from human tRNATrp and showed a great change in aminoacylation efficiency. Our results indicate that the species-specific identity elements of O. sativa mitochondrial tRNATrp are similar to bacterial and eukaryotic (cytoplasm). They are mainly located at the discriminator base, the first and the fifth pairs of bases, the discriminator base G73, two bases in the acceptor stem G1/U72 and U5/A68. Our results also provide new data in support of the hypothesis that mitochondrial tRNATrp is of eubacterial origin.

  16. Morphological and biochemical responses of Oryza sativa L. (cultivar MR219) to ion beam irradiation

    Institute of Scientific and Technical Information of China (English)

    Anna Pick Kiong LING; Ying Chian UNG; Sobri HUSSEIN; Abdul Rahim HARUN; Atsushi TANAKA; Hase YOSHIHIRO

    2013-01-01

    Objective:Heavy ion beam, which has emerged as a new mutagen in the mutation breeding of crops and ornamental plants, is expected to result in the induction of novel mutations. This study investigates the morphological and biochemical responses of Oryza sativa toward different doses of carbon ion beam irradiation. Methods: In this study, the dry seeds of O. sativa were irradiated at 0, 20, 40, 60, 80, 100, and 120 Gy, fol owed by in-vitro germination under control ed conditions. Morphological and biochemical studies were conducted to investigate the morphological and physiological responses of O. sativa towards ion beam irradiation. Results: The study demonstrated that low doses (10 Gy) of ion beam have a stimulating effect on the height, root length, and fresh weight of the plantlets but not on the number of leaves. Meanwhile, doses higher than 10 Gy caused reductions in all the morphological parameters studied as compared to the control samples. The highest total soluble protein content [(2.11±0.47) mg/g FW] was observed in plantlets irradiated at 20 Gy. All irradiated plantlets were found to have 0.85%to 58.32%higher specific activity of peroxidase as compared to the control samples. The present study also revealed that low doses of ion beam (10 and 20 Gy) had negligible effect on the total chlorophyl content of O. sativa plantlets while 40 Gy had a stimulating effect on the chlorophyll content. Plantlets irradiated between 40 to 120 Gy were shown to be 0.38%to 9.98%higher in total soluble nitrogen content which, however, was not significantly different from the control samples. Conclusions:Carbon ion beam irradiation administered at low to moderate doses of 10 to 40 Gy may induce O. sativa mutants with superior characteristics.

  17. Morphological and biochemical responses of Oryza sativa L. (cultivar MR219) to ion beam irradiation*

    Science.gov (United States)

    Ling, Anna Pick Kiong; Ung, Ying Chian; Hussein, Sobri; Harun, Abdul Rahim; Tanaka, Atsushi; Yoshihiro, Hase

    2013-01-01

    Objective: Heavy ion beam, which has emerged as a new mutagen in the mutation breeding of crops and ornamental plants, is expected to result in the induction of novel mutations. This study investigates the morphological and biochemical responses of Oryza sativa toward different doses of carbon ion beam irradiation. Methods: In this study, the dry seeds of O. sativa were irradiated at 0, 20, 40, 60, 80, 100, and 120 Gy, followed by in-vitro germination under controlled conditions. Morphological and biochemical studies were conducted to investigate the morphological and physiological responses of O. sativa towards ion beam irradiation. Results: The study demonstrated that low doses (10 Gy) of ion beam have a stimulating effect on the height, root length, and fresh weight of the plantlets but not on the number of leaves. Meanwhile, doses higher than 10 Gy caused reductions in all the morphological parameters studied as compared to the control samples. The highest total soluble protein content [(2.11±0.47) mg/g FW] was observed in plantlets irradiated at 20 Gy. All irradiated plantlets were found to have 0.85% to 58.32% higher specific activity of peroxidase as compared to the control samples. The present study also revealed that low doses of ion beam (10 and 20 Gy) had negligible effect on the total chlorophyll content of O. sativa plantlets while 40 Gy had a stimulating effect on the chlorophyll content. Plantlets irradiated between 40 to 120 Gy were shown to be 0.38% to 9.98% higher in total soluble nitrogen content which, however, was not significantly different from the control samples. Conclusions: Carbon ion beam irradiation administered at low to moderate doses of 10 to 40 Gy may induce O. sativa mutants with superior characteristics. PMID:24302713

  18. Molecular cloning and expression analysis of a monosaccharide transporter gene OsMST4 from rice (Oryza sativa L.)

    NARCIS (Netherlands)

    Wang, Y.; Xu, H.; Wei, X.; Chai, C.; Xiao, Y.; Zhang, Y.; Chen, B.; Xiao, G.; Ouwerkerk, P.B.F.; Wang, M.; Zhu, Z.

    2007-01-01

    Monosaccharide transporters mediate the membrane transport of a variable range of monosaccharides, which plays a crucial role in sugar distribution throughout the plant. To investigate the significance of monosaccharide transporters for rice (Oryza sativa L.) seed development, cDNA of a new putative

  19. Lack of Zn inhibition of Cd accumulation by rice (Oryza sativa L.) supports non-Zn transporter uptake of Cd

    Science.gov (United States)

    Rice (Oryza sativa L.) grown on Cd contaminated soils has been linked to health problems in subsistence rice farmers in Japan and China. For other crops, normal geogenic Zn inhibits the increased uptake of Cd on contaminated soils. A study was conducted using a multi-chelator buffered nutrient sol...

  20. Genetic Architecture of Cold Tolerance in Rice (Oryza sativa) Determined through High Resolution Genome-Wide Analysis

    Science.gov (United States)

    Cold temperature is an important abiotic stress which negatively affects morphological development and seed production in rice (Oryza sativa L.). At the seedling stage, cold stress causes poor germination, seedling injury and poor stand establishment; and at the reproductive stage cold decreases se...

  1. Mapping of quantitative trait loci for fiber and lignin contents from an interspecific cross Oryza sativa×Oryza rufipogon

    Institute of Scientific and Technical Information of China (English)

    Jian-kun XIE; Xiang-li KONG; Jie CHEN; Biao-lin HU; Piao WEN; Jie-yun ZHUANG; Jin-song BAO

    2011-01-01

    Rice straw is always regarded as a by-product of rice production,but it could be a significant energy source for ruminant animals.Knowledge of the genetic variation and genetic architecture of cell wall traits will facilitate rice breeders by improving relevant traits through selective breeding and genetic engineering.The common wild rice,Oryza rufipogon Griff.,which is considered to be the progenitor of Oryza sativa,has been widely utilized for the identification of genes of agronomic importance for rice genetic improvement.In the present study,the mapping of quantitative trait loci (QTLs) for acid detergent fiber (ADF),neutral detergent fiber (NDF),acid detergent lignin (ADL),and ADL/NDF ratio was carried out in two environments using a backcrossed inbred line (BIL) population derived from a cross between the recurrent parent Xieqingzao B (XB) and an accession of Dongxiang wild rice (DWR).The results indicated that all four traits tested were continuously distributed among the BILs,but many BILs showed transgressive segregation.A total of 16 QTLs were identified for the four traits,but no QTLs were in common in two environments,suggesting that environment has dramatic effects on fiber and lignin syntheses.Compared to the QTL positions for grain yield-related traits,there were no unfavorable correlations between grain yield components and cell wall traits in this population.The QTLs identified in this study are useful for the development of dual-purpose rice varieties that are high in grain yield and are also high in straw quality.

  2. Genetic analysis and gene fine mapping of aroma in rice (Oryza sativa L. Cyperales, Poaceae

    Directory of Open Access Journals (Sweden)

    Shu Xia Sun

    2008-01-01

    Full Text Available We investigated inheritance and carried out gene fine mapping of aroma in crosses between the aromatic elite hybrid rice Oryza sativa indica variety Chuanxiang-29B (Ch-29B and the non-aromatic rice O. sativa indica variety R2 and O. sativa japonica Lemont (Le. The F1 grains and leaves were non-aromatic while the F2 non-aroma to aroma segregation pattern was 3:1. The F3 segregation ratio was consistent with the expected 1:2:1 for a single recessive aroma gene in Ch-29B. Linkage analysis between simple sequence repeat (SSR markers and the aroma locus for the aromatic F2 plants mapped the Ch-29B aroma gene to a chromosome 8 region flanked by SSR markers RM23120 at 0.52 cM and RM3459 at 1.23 cM, a replicate F2 population confirming these results. Three bacterial artificial chromosome (BAC clones cover chromosome 8 markers RM23120 and RM3459. Our molecular mapping data from the two populations indicated that the aroma locus occurs in a 142.85 kb interval on BAC clones AP005301 or AP005537, implying that it might be the same gene reported by Bradbury et al (2005a; Plant Biotec J. 3:363-370. The flanking markers Aro7, RM23120 and RM3459 identified by us could greatly accelerate the efficiency and precision of aromatic rice breeding programs.

  3. Storage protein profile and amino acid content in wild rice Oryza glumaepatula Perfil da proteína de reserva e conteúdo de aminoácidos no arroz silvestre Oryza glumaepatula

    Directory of Open Access Journals (Sweden)

    Karina Freire D'eça Nogueira Santos

    2013-01-01

    Full Text Available - The objective of this work was to determine the total protein profile and the contents of the four major protein fractions (albumin, globulin, prolamin and glutelin and of the amino acids in the endosperm of the rice wild species Oryza glumaepatula. The experiment was performed with 29 accessions of this species, collected from 13 Brazilian locations, and two commercial cultivars. Protein samples were prepared using dried, polished, and ground grains to obtain homogeneous, dry flour used in the preparation of extracts. Oryza glumaepatula accessions were identified with the highest levels of total protein, albumin and glutelin protein fractions, and amino acids (with the exception of tryptophan in comparison to the two analized rice cultivars. The albumin and glutelin profiles in SDS-Page were distinct between rice cultivars and O. glumaepatula. This wild species has the potential to increase the nutritional quality of rice storage protein through interspecific crosses.- O objetivo deste trabalho foi determinar os perfis de proteína total e o conteúdo das quatro principais frações proteicas (albumina, globulina, prolamina e glutelina e de aminoácidos no endosperma da espécie de arroz silvestre Oryza glumaepatula. O experimento foi realizado com 29 acessos dessa espécie, coletados em 13 locais no Brasil, e duas cultivares comerciais. Amostras de proteínas foram preparadas com grãos secos, polidos e moídos, para obtenção de uma farinha seca e homogênea, usada no preparo dos estratos. Acessos de O. glumaepatula foram identificados com os maiores níveis de proteína total, frações proteicas de albumina e glutelina, e aminoácidos (com exceção do triptofano, em comparação às duas cultivares de arroz avaliadas. Os perfis de albumina e glutelina em SDS-PAGE foram distintos entre as cultivares de arroz e O. glumaepatula. Essa espécie silvestre tem o potencial de aumentar a qualidade nutricional da proteína de reserva do arroz por

  4. Comparative analysis of the small RNA transcriptomes of Pinus contorta and Oryza sativa.

    Science.gov (United States)

    Morin, Ryan D; Aksay, Gozde; Dolgosheina, Elena; Ebhardt, H Alexander; Magrini, Vincent; Mardis, Elaine R; Sahinalp, S Cenk; Unrau, Peter J

    2008-04-01

    The diversity of microRNAs and small-interfering RNAs has been extensively explored within angiosperms by focusing on a few key organisms such as Oryza sativa and Arabidopsis thaliana. A deeper division of the plants is defined by the radiation of the angiosperms and gymnosperms, with the latter comprising the commercially important conifers. The conifers are expected to provide important information regarding the evolution of highly conserved small regulatory RNAs. Deep sequencing provides the means to characterize and quantitatively profile small RNAs in understudied organisms such as these. Pyrosequencing of small RNAs from O. sativa revealed, as expected, approximately 21- and approximately 24-nt RNAs. The former contained known microRNAs, and the latter largely comprised intergenic-derived sequences likely representing heterochromatin siRNAs. In contrast, sequences from Pinus contorta were dominated by 21-nt small RNAs. Using a novel sequence-based clustering algorithm, we identified sequences belonging to 18 highly conserved microRNA families in P. contorta as well as numerous clusters of conserved small RNAs of unknown function. Using multiple methods, including expressed sequence folding and machine learning algorithms, we found a further 53 candidate novel microRNA families, 51 appearing specific to the P. contorta library. In addition, alignment of small RNA sequences to the O. sativa genome revealed six perfectly conserved classes of small RNA that included chloroplast transcripts and specific types of genomic repeats. The conservation of microRNAs and other small RNAs between the conifers and the angiosperms indicates that important RNA silencing processes were highly developed in the earliest spermatophytes. Genomic mapping of all sequences to the O. sativa genome can be viewed at http://microrna.bcgsc.ca/cgi-bin/gbrowse/rice_build_3/.

  5. Morelos A-2010, nueva variedad de arroz para siembra directa para el centro de México

    OpenAIRE

    Jorge Salcedo Aceves; Edwin Javier Barrios Gómez

    2012-01-01

    En la zona central de México se siembra el arroz (Oryza sativa L.) en trasplante y directa bajo riego; la mayoría de las variedades se han liberado para trasplante; sin embargo, al usarlas para siembra directa tienen el problema del acame. En 1998 se inicio el mejoramiento del arroz por inducción de mutaciones con el objetivo de obtener una variedad para siembra directa. Para esto, se irradiaron 200 gramos de semilla de la variedad Morelos A-92, en la fuente Gammacell 220 del Instituto Nacion...

  6. Genome-wide analysis of potential cross-reactive endogenous allergens in rice (Oryza sativa L.

    Directory of Open Access Journals (Sweden)

    Fang Chao Zhu

    2015-01-01

    Full Text Available The proteins in the food are the source of common allergic components to certain patients. Current lists of plant endogenous allergens were based on the medical/clinical reports as well as laboratory results. Plant genome sequences made it possible to predict and characterize the genome-wide of putative endogenous allergens in rice (Oryza sativa L.. In this work, we identified and characterized 122 candidate rice allergens including the 22 allergens in present databases. Conserved domain analysis also revealed 37 domains among rice allergens including one novel domain (histidine kinase-, DNA gyrase B-, and HSP90-like ATPase, PF13589 adding to the allergen protein database. Phylogenetic analysis of the allergens revealed the diversity among the Prolamin superfamily and DnaK protein family, respectively. Additionally, some allergens proteins clustered on the rice chromosome might suggest the molecular function during the evolution.

  7. Molecular Cloning and Characterization of Citrate Synthase Gene in Rice( Oryza sativa)

    Institute of Scientific and Technical Information of China (English)

    ZHANG Shan-shan; MING Feng; LU Qun; GUO Bin; SHEN Da-leng

    2005-01-01

    The full-length OsCS encoding citrate synthase was isolated from rice (Oryza sativa L. subsp. japonica). OsCS is 1477-bp long and encodes a 474 amino acid polypeptide. Its putative protein sequence is highly identical to Daucus carota, Nicotiana tabacum,Beta vulgaris subsp., Arabidopsis thaliana, and Citrus junos (>70%). The deduced amino-terminal sequence of OsCS showes characteristics of mitochondrial targeting signal. Southern blot analysis using ORF of the OsCS as the probe indicated that this gene exists in multiple copies in rice genome. The band with predicated size of 82 kD was detected by Western blot after being induced by 0.4 mmol/L IPTG.

  8. Toxic action of zinc on growth and enzyme activities of rice Oryza sativa L. seedlings

    Energy Technology Data Exchange (ETDEWEB)

    Nag, P.; Nag, P.; Paul, A.K.; Mukherji, S.

    1984-01-01

    This paper provides information on the effects of toxic concentrations of zinc sulfate (ZnSO/sub 4/.7H/sub 2/O) on the growth and metabolism of rice Oryza sativa L. seedlings. Root growth inhibition was always more pronounced than was shoot growth inhibition. Root growth was completely inhibited at 40 m M concentration, whereas the magnitude of reduction of shoot length was only 56% at this concentration. Gibberellic acid (GA/sub 3/) was partially capable of relieving zinc inhibition. The activities of peroxidase, IAA oxidase and ascorbic acid oxidase of seedlings increased in response to zinc addition, whereas catalase and IAA synthetase decreased. All the hydrolyzing enzymes, viz., ..cap alpha..-amylase and phytase of endosperm together with RNase and ATPase of the embryo, showed distinct inhibition from the control, the exception being endosperm RNase which was stimulated under zinc treatment. 50 references, 6 figures.

  9. Cloning and characterization of a new actin gene from Oryza sativa L.

    Institute of Scientific and Technical Information of China (English)

    LIANG Weihong; TANG Chaorong; WU Naihu

    2004-01-01

    Using Rho family member osRACD as bait, a new member of actin gene family -Act was isolated from Oryza sativa by yeast two-hybrid system. The full-length cDNA was cloned with 5' RACE technology, which contains an open reading frame of 1134 bp with a predicted protein of 377 amino acids. Sequence alignment revealed 96% to 81.8% identities with some known actin proteins in plants. The method of bioinformatics was used to analyze the protein modification sites, structure and evolution of the gene. Southern blot analysis showed that Act is a single-copy gene in the genome. The result of RT-PCR showed it is ubiquitously expressed in root, shoot, callus and panicle in a temporal fashion. The relationship between Rho family and actin family in evolution and function was also studied.

  10. Phosphate uptake and allocation – a closer look at Arabidopsis thaliana L. and Oryza sativa L.

    Directory of Open Access Journals (Sweden)

    Ewa Młodzińska

    2016-08-01

    Full Text Available This year marks the 20th anniversary of the discovery and characterization of the two Arabidopsis PHT1 genes encoding the phosphate transporter in Arabidopsis thaliana. So far, multiple inorganic phosphate (Pi transporters have been described, and the molecular basis of Pi acquisition by plants has been well characterized. These genes are involved in Pi acquisition, allocation and/or signal transduction. This review summarizes how Pi is taken up by the roots and further distributed within two plants: Arabidopsis thaliana and Oryza sativa L. by plasma membrane phosphate transporters PHT1 and PHO1 as well as by intracellular transporters: PHO1, PHT2, PHT3, PHT4, PHT5 (VPT1, SPX-MFS and phosphate translocators family. We also describe the role of the PHT1 transporters in mycorrhizal roots of rice as an adaptive strategy to cope with limited phosphate availability in soil.

  11. Biochemical and physiological responses of rice (Oryza sativa L.) grown on different sewage sludge amendments rates.

    Science.gov (United States)

    Singh, R P; Agrawal, M

    2010-05-01

    Using sewage sludge, a biological residue from sewage treatment processes, in agriculture is an alternative disposal technique of waste. To study the biochemical and physiological responses of Rice (Oryza sativa L.) grown on different sewage sludge amendments (SSA) rates a field experiment was conducted by mixing sewage sludge at 0, 3, 4.5, 6, 9, 12 kg m(-2) rate to the agricultural soil. Rate of photosynthesis and stomatal conductance increased in plants grown at different SSA rate. Chlorophyll and protein contents also increased due to different SSA rates. Lipid peroxidation, ascorbic acid, peroxidase activity and proline content increased, however, thiol and phenol content decreased in plants grown at different SSA rates. The study concludes that for rice plant sewage sludge amendment in soil may be a good option as plant has adequate heavy metal tolerance mechanism showed by increased rate of photosynthesis and chlorophyll content and various antioxidant levels.

  12. Splicing-site recognition of rice (Oryza sativa L.)DNA sequences by support vector machines

    Institute of Scientific and Technical Information of China (English)

    彭司华; 樊龙江; 彭小宁; 庄树林; 杜维; 陈良标

    2003-01-01

    Motivation: It was found that high accuracy splicing-site recognition of rice (Oryza sativa L.) DNA sequence is especially difficult. We described a new method for the splicing-site recognition of rice DNA sequences. Method: Based on the intron in eukaryotic organisms conforming to the principle of GT-AG, we used support vector machines (SVM) to predict the splicing sites. By machine learning, we built a model and used it to test the effect of the test data set of true and pseudo splicing sites. Results: The prediction accuracy we obtained was 87.53% at the true 5' end splicing site and 87.37% at the true 3' end splicing sites. The results suggested that the SVM approach could achieve higher accuracy than the previous approaches.

  13. Development and characterization of interspecific hybrids between Oryza sativa and O. latifolia by in situ hybridization

    Institute of Scientific and Technical Information of China (English)

    YI ChuanDeng; TANG ShuZhu; ZHOU Yong; LIANG GuoHua; GONG ZhiYun; GU MingHong

    2008-01-01

    Oryza sativa and O. latifolia belong to the AA and CCDD genomes of Oryza, respectively. In this study, interspecific hybrids of these species were obtained using the embryo rescue technique. Hybrid pani-cle traits, such as long awns, small grain, exoteric large purple stigma, grain shattering and dispersed panicles, resemble that of the paternal parent, O. latifolia, whereas there is obvious heterosis in such respects as plant height, tillering ability and vegetative vigor. Chromosome pairing and the genomic components of the hybrid were subsequently investigated using genomic in situ hybridization (GISH) and fluorescent in situ hybridization (FISH) analysis. Based on the mitotic metaphase chromosome numbers of the root tips investigated, the hybrid is a triploid with 36 chromosomes. The genomic con-stitution of the hybrid is ACD. In the meiotic metaphase I of the hybrid pollen mother cell, poor chro-mosome pairing was identified and most of the chromosomes were univalent, which resulted in com-plete male sterility in the hybrid.

  14. Diversity of the Ty-1 copia retrotransposon Tos17 in rice (Oryza sativa L.) and the AA genome of the Oryza genus.

    Science.gov (United States)

    Petit, Julie; Bourgeois, Emmanuelle; Stenger, Wilfried; Bès, Martine; Droc, Gaétan; Meynard, Donaldo; Courtois, Brigitte; Ghesquière, Alain; Sabot, François; Panaud, Olivier; Guiderdoni, Emmanuel

    2009-12-01

    Retrotransposons are mobile genetic elements, ubiquitous in Eukaryotic genomes, which have proven to be major genetic tools in determining phylogeny and structuring genetic diversity, notably in plants. We investigate here the diversity of the Ty1-copia retrotransposon Tos17 in the cultivated rice of Asian origin (Oryza sativa L.) and related AA genome species of the Oryza genus, to contribute understanding of the complex evolutionary history in this group of species through that of the element in the lineages. In that aim, we used a combination of Southern hybridization with a reverse transcriptase (RT) probe and an adapter-PCR mediated amplification, which allowed the sequencing of the genomic regions flanking Tos17 insertions. This analysis was carried out in a collection of 47 A-genome Oryza species accessions and 202 accessions of a core collection of Oryza sativa L. representative of the diversity of the species. Our Southern hybridization results show that Tos17 is present in all the accessions of the A-genome Oryza species, except for the South American species O. glumaepatula and the African species O. glaberrima and O. breviligulata. In O. sativa, the number of putative copies of Tos17 per accession ranged from 1 to 11 and multivariate analysis based on presence/absence of putative copies yielded a varietal clustering which is consistent with the isozyme classification of rice. Adapter PCR amplification and sequencing of flanking regions of Tos17 insertions in A-genome species other than O. sativa, followed by anchoring on the Nipponbare genome sequence, revealed 13 insertion sites of Tos17 in the surveyed O. rufipogon and O. longistaminata accessions, including one shared by both species. In O. sativa, the same approach revealed 25 insertions in the 6 varietal groups. Four insertion sites located on chromosomes 1, 2, 10, and 11 were found orthologous in O. rufipogon and O. sativa. The chromosome 1 insertion was also shared between O. rufipogon and O

  15. Data for global lysine-acetylation analysis in rice (Oryza sativa

    Directory of Open Access Journals (Sweden)

    Yehui Xiong

    2016-06-01

    Full Text Available Rice is one of the most important crops for human consumption and is a staple food for over half of the world׳s population (Yu et al., 2002 [1]. A systematic identification of the lysine acetylome was performed by our research (Xiong et al., 2016 [2]. Rice plant samples were collected from 5 weeks old seedlings (Oryza sativa, Nipponbare. After the trypsin digestion and immunoaffinity precipitation, LC–MS/MS approach was used to identify acetylated peptides. After the collected MS/MS data procession and GO annotation, the InterProScan was used to annotate protein domain. Subcellular localization of the identified acetylated proteins was predicted by WoLF PSORT. The KEGG pathway database was used to annotate identified acetylated protein interactions, reactions, and relations. The data, supplied in this article, are related to “A comprehensive catalog of the lysine-acetylation targets in rice (O. sativa based on proteomic analyses” by Xiong et al. (2016 [2].

  16. Genetic structure and diversity of Oryza sativa L.in Guizhou, China

    Institute of Scientific and Technical Information of China (English)

    ZHANG DongLing; CAO YongSheng; WANG XiangKun; LI ZiChao; ZHANG HongLiang; WEI XingHua; QI YongWen; WANG MeiXing; SUN JunLi; DING Li; TANG ShengXiang; QIU Zong'En

    2007-01-01

    Preserving many kinds of rice resources and rich variations, Guizhou Province is one of the districts with the highest genetic diversity of cultivated rice (Oryza sativa L.) in China. In the current research, genetic diversity and structure of 537 accessions of cultivated rice from Guizhou were studied using 36 microsatellite markers and 39 phenotypic characters. The results showed that the model-based genetic structure was the same as genetic-distance-based one using SSRs but somewhat different from the documented classification (mainly based on phenotype) of two subspecies. The accessions being classified into indica by phenotype but japonica by genetic structure were much more than that being classified into japonica by phenotype but indica by genetic structure. Like Ding Ying's taxonomic system of cultivated rice, the subspecific differentiation was the most distinct differentiation within cultivated rice. But the differentiation within indica or japonica population was different: japonica presented clearer differentiation between soil-watery ecotypes than indica, and indica presented clearer differentiation between seasonal ecotypes than japonica. Cultivated rices in Guizhou revealed high genetic diversity at both DNA and phenotypic levels. Possessing the highest genetic diversity and all the necessary conditions as a center of genetic diversity, region Southwestern of Guizhou was suggested as the center of genetic diversity of O. sativa L. from Guizhou.

  17. Domestication and geographic origin of Oryza sativa in China: insights from multilocus analysis of nucleotide variation of O. sativa and O. rufipogon.

    Science.gov (United States)

    Wei, Xin; Qiao, Wei-Hua; Chen, You-Tao; Wang, Rong-Sheng; Cao, Li-Rong; Zhang, Wan-Xia; Yuan, Nan-Nan; Li, Zi-Chao; Zeng, Han-Lai; Yang, Qing-Wen

    2012-10-01

    Previous studies have indicated that China is one of the domestication centres of Asian cultivated rice (Oryza sativa), and common wild rice (O. rufipogon) is the progenitor of O. sativa. However, the number of domestication times and the geographic origin of Asian cultivated rice in China are still under debate. In this study, 100 accessions of Asian cultivated rice and 111 accessions of common wild rice in China were selected to examine the relationship between O. sativa and O. rufipogon and thereby infer the domestication and evolution of O. sativa in China through sequence analyses of six gene regions, trnC-ycf6 in chloroplast genomes, cox3 in mitochondrial genomes and ITS, Ehd1, Waxy, Hd1 in nuclear genomes. The results indicated that the two subspecies of O. sativa (indica and japonica) were domesticated independently from different populations of O. rufipogon with gene flow occurring later from japonica to indica; Southern China was the genetic diversity centre of O. rufipogon, and the Pearl River basin near the Tropic of Cancer was the domestication centre of O. sativa in China.

  18. Genotype × Environment Interactions of Yield Traits in Backcross Introgression Lines Derived from Oryza sativa cv. Swarna/Oryza nivara

    Science.gov (United States)

    Balakrishnan, Divya; Subrahmanyam, Desiraju; Badri, Jyothi; Raju, Addanki Krishnam; Rao, Yadavalli Venkateswara; Beerelli, Kavitha; Mesapogu, Sukumar; Surapaneni, Malathi; Ponnuswamy, Revathi; Padmavathi, G.; Babu, V. Ravindra; Neelamraju, Sarla

    2016-01-01

    Advanced backcross introgression lines (BILs) developed from crosses of Oryza sativa var. Swarna/O. nivara accessions were grown and evaluated for yield and related traits. Trials were conducted for consecutive three seasons in field conditions in a randomized complete block design with three replications. Data on yield traits under irrigated conditions were analyzed using the Additive Main Effect and Multiplicative Interaction (AMMI), Genotype and Genotype × Environment Interaction (GGE) and modified rank-sum statistic (YSi) for yield stability. BILs viz., G3 (14S) and G6 (166S) showed yield stability across the seasons along with high mean yield performance. G3 is early in flowering with high yield and has good grain quality and medium height, hence could be recommended for most of the irrigated locations. G6 is a late duration genotype, with strong culm strength, high grain number and panicle weight. G6 has higher yield and stability than Swarna but has Swarna grain type. Among the varieties tested DRRDhan 40 and recurrent parent Swarna showed stability for yield traits across the seasons. The component traits thousand grain weight, panicle weight, panicle length, grain number and plant height explained highest genotypic percentage over environment and interaction factors and can be prioritized to dissect stable QTLs/ genes. These lines were genotyped using microsatellite markers covering the entire rice genome and also using a set of markers linked to previously reported yield QTLs. It was observed that wild derived lines with more than 70% of recurrent parent genome were stable and showed enhanced yield levels compared to genotypes with higher donor genome introgressions.

  19. FUNGICIDAS PARA CONTROLE DE MANCHAS EM GLUMAS DO ARROZ IRRIGADO

    Directory of Open Access Journals (Sweden)

    Ricardo Silveiro Balardin

    1992-12-01

    Full Text Available Foi conduzido um experimento a campo com o objetivo de avaliar a eficiência de fungicidas no controle de manchas em glumas de arroz (Oryza sativa L.. Foi utilizado o delineamento de blocos ao acaso, com quatro repetições. Os fungicidas utilizados foram Propiconazole, Pyroquilon, Mancozeb e IBP, com uma ou duas pulverizações. No estádio de maturação foram colhidas amostras de panículas para as análises de patologia das glumas em laboratório. Os métodos de análise foram observação de sintomas em plântulas e do papel de filtro. Devido a natureza complexa das causas das manchas em glumas de arroz, não foi possível detectar efeito fungicida eficiente no controle, rendimento/ha e rendimento de engenho.

  20. DYNAMICS OF K +, NA +, CA2 + IONS IN RICE PLANTS (Oryza sativa L. IN ONTOGENESIS UNDER SOIL SALINITY

    Directory of Open Access Journals (Sweden)

    Tkacheva M. S.

    2014-06-01

    Full Text Available Under conditions of vegetation experiment at soil artificial chloride salinization the dynamics of accumulation and distribution of sodium, potassium and calcium in organs of rice plants (Oryza sativa L. have been studied, as well as their correlation with tissue hydration in ontogenesis. The significant restriction of salinization ions transport and accumulation, particularly sodium, in the actively functioning upper leaves and panicles has been observed. Whereas the content of calcium and potassium in the experimental and control plants differed slightly

  1. Transfer of bacterial blight resistance from Oryza meyeriana to O.Sativa L.by asymmetric somatic hybridization

    Institute of Scientific and Technical Information of China (English)

    ZHU Yongsheng; CHEN Baotang; YU Shunwu; ZHANG Duanpin; ZHANG Xueqin; YAN Qiusheng

    2004-01-01

    Asymmetric somatic hybrid plants were produced between cultivated rice (Oryza sativa L.) and wild species [O. Meyeriana (Zoll. etMor, exSteud.)] with high resistance to rice bacterial blight. X-ray-irradiated protoplasts of the wild species were used as donor and chemically fused with iodoacetamide-inactivated protoplasts of rice cv. 02428to produce hybrids. Seventy-two plants were regenerated from 623 calli based on metabolic complementation. The morphological characters of the plants closely resembled that of the rice. Simple sequence repeats were employed to identify their hybridity. Cytological analysis of root-tips revealed that their chromosome number varied in the range of 27-38. The somatic hybrids were inoculated with strains of Xanthamonas oryzae pv. Oryzae at adult growth stage and demonstrated the resistance to bacterial blight introgression from the O. Meyeriana.

  2. Practical Utilization of OryzaExpress and Plant Omics Data Center Databases to Explore Gene Expression Networks in Oryza Sativa and Other Plant Species.

    Science.gov (United States)

    Kudo, Toru; Terashima, Shin; Takaki, Yuno; Nakamura, Yukino; Kobayashi, Masaaki; Yano, Kentaro

    2017-01-01

    Analysis of a gene expression network (GEN), which is constructed based on similarity of gene expression profiles, is a widely used approach to gain clues for new biological insights. The recent abundant availability of transcriptome data in public databases is enabling GEN analysis under various experimental conditions, and even comparative GEN analysis across species. To provide a platform to gain biological insights from public transcriptome data, valuable databases have been created and maintained. This chapter introduces the web database OryzaExpress, providing omics information on Oryza sativa (rice). The integrated database Plant Omics Data Center, supporting a wide variety of plant species, is also described to compare omics information among multiple plant species.

  3. Cytological mechanisms of interspecific incrossability and hybrid sterility between Oryza sativa L. and O.alta Swallen

    Institute of Scientific and Technical Information of China (English)

    FU XueLin; LU YongGen; LIU XiangDong; Li JinQuan; Feng JiuHuan

    2007-01-01

    Oryza sativa and O. alta belong to AA and CCDD genomes in Oryza, respectively. Interspecific reproductive isolation limits the transfer of favorable genes from O. alta into O. sativa. The cytological mechanisms of interspecific incrossability and hybrid sterility between O. sativa and O. alta were studied systematically in this paper. We indentified two cytological causes of interspecific incrossability. First, we observed embryo sac incompatibility that caused fertilization barriers of variable severity such as non-fertilization, fertilization stagnation and egg cell single-fertilization. Second, we observed hybrid inviability, the major cause for incrossability, apparent from hybrid embryo developmental stagnation and embryo abortion. Hybrid sterility included both embryo sac sterility and pollen sterility.The hybrid embryo sac was completely sterile and exhibited mainly embryo sac degeneration. Hybrid pollen was also sterile and mainly typical abortive. Hybrid sterility was mainly caused by severely abnormal meioses of megasporocytes and pollen mother cells; it is the most important abnormality, being chromosome sterility. Several methods are suggested to overcome the interspecific reproductive isolation between O. sativa and O. alta.

  4. Progress on Transferring Elite Genes from Non-AA Genome Wild Rice into Oryza sativa through Interspecific Hybridization

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    The progress of research on transferring elite genes from non-AA genome wild rice into Oryza sativa through interspecific hybridization are in three respects,that is,breeding monosomic alien addition lines (MAALs),constructing introgression lines (ILs) and analyzing the heredity of the characters and mapping the related genes.There are serious reproductive barriers,mainly incrossability and hybrid sterility,in the interspecific hybridization of O.sativa with non-AA genome wild rice.These are the 'bottleneck' for transferring elite genes from wild rice to O.sativa.Combining traditional crossing method with biotechnique is a reliable way to overcome the reproductive barriers and to improve the utilizing efficiency of non-AA genome wild rice.

  5. Characterization of Interspecific Hybrids Between Oryza sativa L. and Three Wild Rice Species of China by Genomic In Situ Hybridization

    Institute of Scientific and Technical Information of China (English)

    Guang-Xuan Tan; Zhi-Yong Xiong; Hua-Jun Jin; Gang Li; Li-Li Zhu; Li-Hui Shu; Guang-Cun He

    2006-01-01

    In the genus Oryza, interspecific hybrids are useful bridges for transferring the desired genes from wild species to cultivated rice (Oryza sativa L.). In the present study, hybrids between O. sativa (AA genome)and three Chinese wild rices, namely O. rufipogon (AA genome), O. officinalis (CC genome), and O. meyeriana (GG genome), were produced. Agricultural traits of the F1 hybrids surveyed were intermediate between their parents and appreciably resembled wild rice parents. Except for the O. sativa × O. rufipogon hybrid,the other F1 hybrids were completely sterile. Genomic in situ hybridization (GISH) was used for hybrid verification. Wild rice genomic DNAs were used as probes and cultivated rice DNA was used as a block. With the exception of O. rufipogon chromosomes, this method distinguished the other two wild rice and cultivated rice chromosomes at the stage of mitotic metaphase with different blocking ratios. The results suggest that a more distant phylogenetic relationship exists between O. meyeriana and O. sativa and that O. rufipogon and O. sativa share a high degree of sequence homology. The average mitotic chromosome length of O. officinalis and O. meyeriana was 1.25- and 1.51-fold that of O. sativa, respectively. 4',6'-Diamidino2-phenylindole staining showed that the chromosomes of O. officinalis and O. meyeriana harbored more heterochromatin, suggesting that the C and G genomes were amplified with repetitive sequences compared with the A genome. Although chromocenters formed by chromatln compaction were detected with wild rice-specific signals corresponding to the C and G genomes in discrete domains of the F1 hybrid interphase nuclei, the size and number of O. meyeriana chromocenters were bigger and greater than those of O. officinalis. The present results provide an important understanding of the genomic relationships and a tool for the transfer of useful genes from three native wild rice species in China to cultivars.

  6. Regulação epigenética de um gene de resposta a stress de frio em arroz (OsDREB1B)

    OpenAIRE

    Ravasco, Sebastião Costa

    2015-01-01

    O arroz (Oryza sativa L.) constitui a principal fonte de alimento para mais de metade da população mundial. O frio tem um grande impacto no desenvolvimento da planta de arroz com efeitos negativos ao nível da produtividade e economia mundial. Os mecanismos epigenéticos associados a alterações estruturais da cromatina estão envolvidos nos mecanismos de resposta das plantas a stresses abióticos. O foco do presente trabalho consistiu na compreensão da influência de fatores epigenéticos, nomeadam...

  7. Two solanesyl diphosphate synthases with different subcellular localizations and their respective physiological roles in Oryza sativa.

    Science.gov (United States)

    Ohara, Kazuaki; Sasaki, Kanako; Yazaki, Kazufumi

    2010-06-01

    Long chain prenyl diphosphates are crucial biosynthetic precursors of ubiquinone (UQ) in many organisms, ranging from bacteria to humans, as well as precursors of plastoquinone in photosynthetic organisms. The cloning and characterization of two solanesyl diphosphate synthase genes, OsSPS1 and OsSPS2, in Oryza sativa is reported here. OsSPS1 was highly expressed in root tissue whereas OsSPS2 was found to be high in both leaves and roots. Enzymatic characterization using recombinant proteins showed that both OsSPS1 and OsSPS2 could produce solanesyl diphosphates as their final product, while OsSPS1 showed stronger activity than OsSPS2. However, an important biological difference was observed between the two genes: OsSPS1 complemented the yeast coq1 disruptant, which does not form UQ, whereas OsSPS2 only very weakly complemented the growth defect of the coq1 mutant. HPLC analyses showed that both OsSPS1 and OsSPS2 yeast transformants produced UQ9 instead of UQ6, which is the native yeast UQ. According to the complementation study, the UQ9 levels in OsSPS2 transformants were much lower than that of OsSPS1. Green fluorescent protein fusion analyses showed that OsSPS1 localized to mitochondria, while OsSPS2 localized to plastids. This suggests that OsSPS1 is involved in the supply of solanesyl diphosphate for ubiquinone-9 biosynthesis in mitochondria, whereas OsSPS2 is involved in providing solanesyl diphosphate for plastoquinone-9 formation. These findings indicate that O. sativa has a different mechanism for the supply of isoprenoid precursors in UQ biosynthesis from Arabidopsis thaliana, in which SPS1 provides a prenyl moiety for UQ9 at the endoplasmic reticulum.

  8. Molecular Evolution of the TAC1 Gene from Rice (Oryza sativa L.)

    Institute of Scientific and Technical Information of China (English)

    Jiahuan Jiang; Lubin Tan; Zuofeng Zhu; Yongcai Fu; Fengxia Liu; Hongwei Cai; Chuanqing Sun

    2012-01-01

    Tiller angle is a key feature of the architecture of cultivated rice (Oryza sativa),since it determines planting density and influences rice yield.Our previous work identified Tiller Angle Control 1 (TAC1) as a major quantitative trait locus that controls rice tiller angle.To further clarify the evolutionary characterization of the TAC1 gene,we compared a TAC1-containing 3164-bp genomic region among 113 cultivated varieties and 48 accessions of wild rice,including 43 accessions of O.rufipogon and five accessions of O.nivara.Only one single nucleotide polymorphism (SNP),a synonymous substitution,was detected in TAC1 coding regions of the cultivated rice varieties,whereas one synonymous and one nonsynonymous SNP were detected among the TAC1 coding regions of wild rice accessions.These data indicate that little natural mutation and modification in the TAC1 coding region occurred within the cultivated rice and its progenitor during evolution.Nucleotide diversities in the TAC1 gene regions of O.sativa and O.rufipogon of 0.00116 and 0.00112,respectively,further indicate that TAC1 has been highly conserved during the course of rice domestication.A functional nucleotide polymorphism (FNP) of TAC1 was only found in the japonica rice group.A neutrality test revealed strong selection,especially in the 3'-flanking region of the TAC1 coding region containing the FNP in the japonica rice group.However,no selection occurred in the indica and wild-rice groups.A phylogenetic tree derived from TAC1 sequence analysis suggests that the indica and japonica subspecies arose independently during the domestication of wild rice.

  9. Sequence analysis of ORF IV RTBV isolated from tungro infected Oryza sativa L. cv Ciherang

    Science.gov (United States)

    Hastilestari, Bernadetta Rina; Astuti, Dwi; Estiati, Amy; Nugroho, Satya

    2015-09-01

    The Effort to increase rice production is often constrained by pest and disease such as Tungro. The Tungro disease is caused by the joint infection with two dissimilar viruses; a bacil-form-DNA virus, the Rice tungro bacilliform virus(RTBV) and the spherical RNA virus, Rice tungro spherical virus (RTSV) and transmitted by Green leafhopper (Nephotettix virescens). The symptom of disease is caused by the presence of RTBV. The genome of RTBV consists of four Open reading frames (ORFs) which encode functional proteins. Of the four, ORF IV is unique because it exists only in RTBV. The most efficient method of generating disease resistance plants is to look for natural sources of resistance genes in wild or germplasm and then transfer the gene and the accompanying resistance in cultivated crop varieties. The aim of this study is, therefore, to isolate and analyze of 1170 bp gene of ORF 4 of Tungro virus isolated from an Indonesian rice cultivar, Ciherang (Oryza sativa L. cv Indica). DNA sequencing analysis using BLAST showed 94% similarity with the reference sequence gen bank Acc.M65026.1. The comparisons and mutation analysis of DNA sequences were discussed in this research.

  10. A collection of glycosyltransferases from rice (Oryza sativa) exposed to atrazine.

    Science.gov (United States)

    Lu, Yi Chen; Yang, Sheng Ning; Zhang, Jing Jing; Zhang, Jia Jun; Tan, Li Rong; Yang, Hong

    2013-12-01

    The rice (Oryza sativa) GTs belong to a super family possibly with hundreds of members. However, which GTs are involved in plant response to toxic chemicals is unknown. Here, we demonstrated 59 novel GT genes screened from our recent genome-wide sequencing datasets of rice crops exposed to atrazine (a herbicide persistent in ecosystems). Analysis of GT genes showed that most of the GTs contain functional domains typically found in proteins transferring glycosyl moieties to their target compounds. A phylogenetic analysis revealed that many GT genes from different families have diverse cis-elements necessary for response to biotic and environmental stresses. Experimental validation for the GTs was undertaken through a microarray, and 36 GT genes were significantly detected with an expression pattern similar to that from deep-sequencing datasets. Furthermore, 12 GT genes were randomly selected and confirmed by quantitative real-time RT-PCR. Finally, the special activity of total GTs was determined in rice roots and shoots, with an increased activity under the atrazine exposure. This response was closely associated with atrazine absorption in the rice tissues. These results indicate that exposure to atrazine can trigger specific GT genes and enzyme activities in rice.

  11. Identification of quantitative trait loci affecting tolerance to low phosphorus in rice (Oryza Sativa L.)

    Institute of Scientific and Technical Information of China (English)

    2000-01-01

    Phosphorus (P)-deficiency in rice (Oryza.Sativa.L) may cause yield reductions.This research has been conducted to map quantitative trait loci (QTLs) for tolerance to low phosphorus stress in a doubled haploid (DH) population.By using the linkage map of this population,the QTLs for relative dry weight,relative P content and relative P utilization efficiency have been located.The results indicate that one RFLP marker located on chromosome 6 is closely associated with relative root dry weight,relative shoot dry weight and relative total dry weight,which explain 24.9%,20.5% and 25.2% of the total phenotypic variations,respectively.Two QTLs affect relative P uptake content,which account for 20.7% of the total phenotypic variations.One micro-effect QTL has been found to be associated with relative P utilization efficiency.It is suggested that the P uptake efficiency is more associated with P efficiency.Among the secondary physiological indices of P uptake efficiency,the root dry weight is more important than others.

  12. Cloning of Novel Repeat-associated Small RNAs Derived from Hairpin Precursors in Oryza sativa

    Institute of Scientific and Technical Information of China (English)

    Chengguo YAO; Botao ZHAO; Wei LI; Yang LI; Wenming QIN; Bing HUANG; Youxin JIN

    2007-01-01

    Plant small non-coding RNAs including microRNAs (miRNAs), small interfering RNAs (siRNAs) and trans-acting siRNAs, play important roles in modulating gene expression in cells. Here we isolated 21 novel endogenous small RNA molecules, ranging from 18 to 24 nucleotides, in Oryza sativa that can be mapped to 111 hairpin precursors. Further analysis indicated that most of these hairpin sequences originated from putative miniature inverted-repeat transposable elements, a major type of DNA transposon.Considering that miRNA is characteristic of hairpin-like precursor and plant endogenous siRNAs are often located at transposon regions, we hypothesized that our cloned small RNAs might represent the intermediate product in the evolutionary process between siRNAs and miRNAs. Northern blot analysis indicated that five of them were much more abundantly expressed in flower compared to other tissues, implying their potential function in inflorescence. In conclusion, our results enrich rice small RNA data and provide a meaningful perspective for small RNA annotation in plants.

  13. Monoclonal Antibody Production and Immunolocalization of a Salinity Stress-Related Protein in Rice (Oryza sativa)

    Institute of Scientific and Technical Information of China (English)

    Jackson MARCONDES; Ana Beatriz GARCIA

    2011-01-01

    Among various physiological responses to salt stress,the synthesis of a lectin-related protein of 14.5 kDa was observed in rice plants (Oryza sativa L.) under the treatment of 170 mmol/L NaCl.In order to better understand the role of the SALT protein in the physiological processes involving salinity,it was immunolocalized in mesophilic cells of leaf sheath and blade of a rice variety IAC-4440 following monoclonal antibodies produced by hybridome culture technique.This variety turned out to be an excellent model for that purpose,since it accumulates SALT protein even in absence of salt treatment and it has been classified as moderately sensitive to salinity and a superior grain producer.This feature was relevant for this work since it allowed the use of plants without the deleterious effects caused by salinity.Immunocytochemistry assays revealed that the SALT protein is located in the stroma of chloroplasts under non-stressing condition.Since the chloroplast is the main target affected by salinity and considering that the SALT protein does not present any apparent signal peptide for organelle localization,its lectin-like activity seems to play an important role in the establishment of stable complexes,either to other proteins or to oligosaccharides that are translocated to the chloroplast.

  14. Experimental and theoretical approaches for Cd(II) biosorption from aqueous solution using Oryza sativa biomass.

    Science.gov (United States)

    Fawzy, Manal; Nasr, Mahmoud; Helmi, Shacker; Nagy, Heba

    2016-11-01

    Biomass of Oryza sativa (OS) was tested for the removal of Cd(II) ions from synthetic and real wastewater samples. Batch experiments were conducted to investigate the effects of operating parameters on Cd(II) biosorption. Fourier transform infrared spectroscopy, scanning electron microscopy, and energy-dispersive x-ray spectroscopy were used to examine the surface characteristics of the Cd(II)-loaded biomass. The maximum removal efficiency of Cd(II) was 89.4% at optimum pH 6.0, biosorbent dose 10.0 g L(-1), initial Cd(II) 50 mg L(-1), and biosorbent particle size 0.5 mm. The applicability of Langmuir and Freundlich isotherms to the sorbent system implied the existence of both monolayer and heterogeneous surface conditions. Kinetic studies revealed that the adsorption process of Cd(II) followed the pseudo-second-order model (r2: 0.99). On the theoretical side, an adaptive neuro-fuzzy inference system (ANFIS) was applied to select the operating parameter that mostly influences the Cd(II) biosorption process. Results from ANFIS indicated that pH was the most influential parameter affecting Cd(II) removal efficiency, indicating that the biomass of OS was strongly pH sensitive. Finally, the biomass was confirmed to adsorb Cd(II) from real wastewater samples with removal efficiency close to 100%. However, feasibility studies of such systems on a large-scale application remain to be investigated.

  15. Effects of cadmium on bioaccumulation and biochemical stress response in rice (Oryza sativa L.).

    Science.gov (United States)

    Xie, Pan-pan; Deng, Juan-wei; Zhang, Hui-min; Ma, You-hua; Cao, De-ju; Ma, Ru-xiao; Liu, Ren-jing; Liu, Cheng; Liang, Yue-gan

    2015-12-01

    This study investigated the effects of various Cd concentrations on the bioaccumulation, antioxidative defense, and stress responses of rice (Oryza sativa L.). The distribution characteristics of Cd in rice were in the following order: roots>stems>grains. The bioconcentration factor values of Cd increased at concentrations lower than 3.00 mg Cd/kg and approximately decreased to a constant value at concentrations higher than 3.00 mg Cd/kg. Rice showed a higher Cd accumulation potential at low Cd concentrations than at high Cd concentrations. The Freundlich isotherm model described well the adsorption isotherms of Cd in rice roots. The biosorption mechanism of rice roots was determined to be cooperative adsorption. The malondialdehyde (MDA) content increased at a concentration range of 0.00-5.00 mg/L, indicating the enhancement of lipid peroxidation. By contrast, the MDA content slightly decreased at concentrations higher than 5.00 mg/L. Peroxidase (POD) activity exhibited active response to oxidative stress at concentrations lower than 5.00 mg/L but was inhibited at concentrations higher than 5.00 mg/L. The response to Cd stress of the N-H, O-H and C-O functional groups in rice shoots was observed via Fourier transform infrared spectroscopy.

  16. Quantitative phosphoproteomic analysis of early seed development in rice (Oryza sativa L.).

    Science.gov (United States)

    Qiu, Jiehua; Hou, Yuxuan; Tong, Xiaohong; Wang, Yifeng; Lin, Haiyan; Liu, Qing; Zhang, Wen; Li, Zhiyong; Nallamilli, Babi R; Zhang, Jian

    2016-02-01

    Rice (Oryza sativa L.) seed serves as a major food source for over half of the global population. Though it has been long recognized that phosphorylation plays an essential role in rice seed development, the phosphorylation events and dynamics in this process remain largely unknown so far. Here, we report the first large scale identification of rice seed phosphoproteins and phosphosites by using a quantitative phosphoproteomic approach. Thorough proteomic studies in pistils and seeds at 3, 7 days after pollination resulted in the successful identification of 3885, 4313 and 4135 phosphopeptides respectively. A total of 2487 proteins were differentially phosphorylated among the three stages, including Kip related protein 1, Rice basic leucine zipper factor 1, Rice prolamin box binding factor and numerous other master regulators of rice seed development. Moreover, differentially phosphorylated proteins may be extensively involved in the biosynthesis and signaling pathways of phytohormones such as auxin, gibberellin, abscisic acid and brassinosteroid. Our results strongly indicated that protein phosphorylation is a key mechanism regulating cell proliferation and enlargement, phytohormone biosynthesis and signaling, grain filling and grain quality during rice seed development. Overall, the current study enhanced our understanding of the rice phosphoproteome and shed novel insight into the regulatory mechanism of rice seed development.

  17. Determination of critical period of weed control in rice (Oryza sativa L. in Lorestan province

    Directory of Open Access Journals (Sweden)

    abdolreza ahmadi

    2009-06-01

    Full Text Available Effects of different periods of weed control in paddy rice (Oryza sativa L. were studied in Veysian region of Lorestan province in 2004. The experiment was conducted in a randomized complete block design with four replications and 10 treatments of hand weeding in two series included weed free and weed infested plot up to 14, 28, 42 and 56 days after transplanting, plus weed free and weed infested control. Based on 5 and 10% acceptable yield loses, the critical periods were between 11 to 40 and 14 to 30 days after transplantation, respectively. Weed competition before and/or after these critical periods had negligible effects on grain yield of rice. This period, based on growing degree days (GDD was 198-768 GDD for 5% acceptable yield loss. Increasing periods of weed interference in the early stage of the crop resulted in a steady decline in grain yield. Yield losses equivalent to 47 kg/ha of grain resulted for each day that weed control was delayed between 14 and 28 days after transplanting.

  18. Effect of coated urea on cadmium accumulation in Oryza sativa L. grown in contaminated soil.

    Science.gov (United States)

    Xu, Chao; Wu, Zisong; Zhu, Qihong; Zhu, Hanhua; Zhang, Yangzhu; Huang, Daoyou

    2015-11-01

    Experiments were conducted to determine the effects of three types of coated urea on the accumulation of cadmium (Cd) in rice (Oryza sativa L.) grown in contaminated soil. Pot-culture experiments were conducted in a greenhouse from July to November 2012 on the rice cultivar "Hua Hang Si Miao" in Guangzhou (China). The experimental design was completely randomized with four treatments and three replications. The treatments were control (CK) (N 0 mg/kg), prilled urea (PU) (N 200 mg/kg), polymer-coated urea (PCU) (N 200 mg/kg), and sulfur-coated urea (SCU) (N 200 mg/kg). Our results indicated that applications of PCU and SCU slightly increased the dry weight of rice grains. The application of SCU significantly decreased the CaCl2 and toxicity characteristic leaching procedure (TCLP)-extractable Cd concentrations by 15.4 and 56.1%, respectively. Sequential extractions showed that PCU and SCU applications led to a significant decrease in Cd in the exchangeable fraction and an increase in the bound iron (Fe) and manganese (Mn) oxides fractions. Cd concentrations in grains treated with PCU were reduced by 11.7%, whereas SCU significantly reduced Cd concentrations by 29.1%. SCU reduced Cd transfer from the straws to the grain. Our results demonstrated that PCU and SCU may be effective in mitigating Cd accumulation in rice grown in acidic Cd-contaminated soil, especially in plants receiving SCU.

  19. Biochemical and structural properties of cyanases from Arabidopsis thaliana and Oryza sativa.

    Science.gov (United States)

    Qian, Dan; Jiang, Lin; Lu, Lu; Wei, Chunhong; Li, Yi

    2011-01-01

    Cyanate is toxic to all organisms. Cyanase converts cyanate to CO₂ and NH₃ in a bicarbonate-dependent reaction. The biophysical functions and biochemical characteristics of plant cyanases are poorly studied, although it has been investigated in a variety of proteobacteria, cyanobacteria and fungi. In this study, we characterised plant cyanases from Arabidopsis thaliana and Oryza sativa (AtCYN and OsCYN). Prokaryotic-expressed AtCYN and OsCYN both showed cyanase activity in vitro. Temperature had a similar influence on the activity of both cyanases, but pH had a differential impact on AtCYN and OsCYN activity. Homology modelling provided models of monomers of AtCYN and OsCYN, and a coimmunoprecipitation assay and gel filtration indicated that AtCYN and OsCYN formed homodecamers. The analysis of single-residue mutants of AtCYN indicated that the conserved catalytic residues also contributed to the stability of the homodecamer. KCNO treatment inhibited Arabidopsis germination and early seedling growth. Plants containing AtCYN or OsCYN exhibited resistance to KCNO stress, which demonstrated that one role of cyanases in plants is detoxification. Transcription level of AtCYN was higher in the flower than in other organs of Arabidopsis. AtCYN transcription was not significantly affected by KCNO treatment in Arabidopsis, but was induced by salt stress. This research broadens our knowledge on plant detoxification of cyanate via cyanase.

  20. Vinegar rice (Oryza sativa L. produced by a submerged fermentation process from alcoholic fermented rice

    Directory of Open Access Journals (Sweden)

    Wilma Aparecida Spinosa

    2015-03-01

    Full Text Available Considering the limited availability of technology for the production of rice vinegar and also due to the potential consumer product market, this study aimed to use alcoholic fermented rice (rice wine (Oryza sativa L. for vinegar production. An alcoholic solution with 6.28% (w/v ethanol was oxidized by a submerged fermentation process to produce vinegar. The process of acetic acid fermentation occurred at 30 ± 0.3°C in a FRINGS® Acetator (Germany for the production of vinegar and was followed through 10 cycles. The vinegar had a total acidity of 6.85% (w/v, 0.17% alcohol (w/v, 1.26% (w/v minerals and 1.78% (w/v dry extract. The composition of organic acids present in rice vinegar was: cis-aconitic acid (6 mg/L, maleic acid (3 mg/L, trans-aconitic acid (3 mg/L, shikimic + succinic acid (4 mg/L, lactic acid (300 mg/L, formic acid (180 mg/L, oxalic acid (3 mg/L, fumaric acid (3 mg/L and itaconic acid (1 mg/L.

  1. Hybrid Sterility in Rice (Oryza sativa L.) Involves the Tetratricopeptide Repeat Domain Containing Protein.

    Science.gov (United States)

    Yu, Yang; Zhao, Zhigang; Shi, Yanrong; Tian, Hua; Liu, Linglong; Bian, Xiaofeng; Xu, Yang; Zheng, Xiaoming; Gan, Lu; Shen, Yumin; Wang, Chaolong; Yu, Xiaowen; Wang, Chunming; Zhang, Xin; Guo, Xiuping; Wang, Jiulin; Ikehashi, Hiroshi; Jiang, Ling; Wan, Jianmin

    2016-07-01

    Intersubspecific hybrid sterility is a common form of reproductive isolation in rice (Oryza sativa L.), which significantly hampers the utilization of heterosis between indica and japonica varieties. Here, we elucidated the mechanism of S7, which specially causes Aus-japonica/indica hybrid female sterility, through cytological and genetic analysis, map-based cloning, and transformation experiments. Abnormal positioning of polar nuclei and smaller embryo sac were observed in F1 compared with male and female parents. Female gametes carrying S7(cp) and S7(i) were aborted in S7(ai)/S7(cp) and S7(ai)/S7(i), respectively, whereas they were normal in both N22 and Dular possessing a neutral allele, S7(n) S7 was fine mapped to a 139-kb region in the centromere region on chromosome 7, where the recombination was remarkably suppressed due to aggregation of retrotransposons. Among 16 putative open reading frames (ORFs) localized in the mapping region, ORF3 encoding a tetratricopeptide repeat domain containing protein was highly expressed in the pistil. Transformation experiments demonstrated that ORF3 is the candidate gene: downregulated expression of ORF3 restored spikelet fertility and eliminated absolutely preferential transmission of S7(ai) in heterozygote S7(ai)/S7(cp); sterility occurred in the transformants Cpslo17-S7(ai) Our results may provide implications for overcoming hybrid embryo sac sterility in intersubspecific hybrid rice and utilization of hybrid heterosis for cultivated rice improvement.

  2. Tourist C transposable elements are closely associated with genes expressed in flowers of rice (Oryza sativa).

    Science.gov (United States)

    Iwamoto, M; Higo, K

    2003-03-01

    Tourist elements comprise a group of transposable elements in plants. One of these elements, Tourist-OsaCatA(a Tourist C element), has been found in the 5; flanking region of a catalase gene, CatA, in rice (Oryza sativa). Using reverse transcriptase-PCR (RT-PCR) analyses of leaves, roots, flowers and developing seeds of rice, we assessed the transcription levels of ten known genes containing Tourist C elements, and of three additional putative genes for which expressed sequence tags (ESTs) including Tourist C elements have been isolated. We found that nine of the ten known genes and two of the three represented by ESTs were expressed in at least one of the organs we analyzed, and all of the genes detected were expressed in flowers, usually in stamens or pistils. We also assessed the expression of the 29 Tourist C-containing hypothetical coding sequences (CDSs) obtained so far by high-throughput genomic sequencing. We found that CDSs of all 11 genes whose transcripts were detectable by RT-PCR were expressed in flowers, especially in stamens or pistils. In contrast, RT-PCR analyses of genes or CDSs associated with other miniature inverted-repeat transposable elements (MITEs), such as Tourist D, Gaijin, Explorer, and Castaway, showed that some of them were expressed only minimally or not at all in flowers. Therefore, compared with other MITEs, Tourist C elements seem to show a strong association with genes that are expressed in the flowers of rice.

  3. Urea-induced Inactivation and Unfolding of Recombinant Phospholipid Hydroperoxide Glutathione Peroxidase from Oryza sativa

    Institute of Scientific and Technical Information of China (English)

    WANG Feng; ZHOU Hui-ping; KONG Bao-hua; FAN Jing-hua; CHEN Hai-ru; LIU Jin-yuan

    2007-01-01

    Phospholipid hydroperoxide glutathione peroxidase is an antioxidant enzyme that has the highest capability of reducing membrane-bound hydroperoxy lipids as compared to free organic and inorganic hydroperoxides amongst the glutathione peroxidases. In this study, urea-induced effects on the inactivation and unfolding of a recombinant phospholipid hydroperoxide glutathione peroxidase(PHGPx) from Oryza sativa were investigated by means of circular dichroism and fluorescence spectroscopy. With the increase of urea concentration, the residual activity of OsPHGPx decreasea correspondingly. When the urea concentration is above 5.0 mol/L, there was no residual activity. In addition,the observed changes in intrinsic tryptophan fluorescence, the binding of the hydrophobic fluorescence probe ANS,and the far UV CD describe a common dependence on the concentration of urea suggesting that the conformational features of the native OsPHGPx are lost in a highly cooperative single transition. The unfolding process comprises of three zones: the native base-line zone between 0 and 2.5 mol/L urea, the transition zone between 2.5 and 5.5 mol/L urea, and the denatured base-line zone above 5.5 mol/L urea. The transition zone has a midpoint at about 4.0 mol/L urea.

  4. Comprehensive phenotypic analysis of rice (Oryza sativa) response to salinity stress

    KAUST Repository

    Pires, Inês S.

    2015-07-22

    Increase in soil salinity levels is becoming a major cause of crop yield losses worldwide. Rice (Oryza sativa) is the most salt-sensitive cereal crop, and many studies have focused on rice salinity tolerance, but a global understanding of this crop\\'s response to salinity is still lacking. We systematically analyzed phenotypic data previously collected for 56 rice genotypes to assess the extent to which rice uses three known salinity tolerance mechanisms: shoot-ion independent tolerance (or osmotic tolerance), ion exclusion, and tissue tolerance. In general, our analyses of different phenotypic traits agree with results of previous rice salinity tolerance studies. However, we also established that the three salinity tolerance mechanisms mentioned earlier appear among rice genotypes and that none of them is predominant. Against the pervasive view in the literature that the K+/Na+ ratio is the most important trait in salinity tolerance, we found that the K+ concentration was not significantly affected by salt stress in rice, which puts in question the importance of K+/Na+ when analyzing rice salt stress response. Not only do our results contribute to improve our global understanding of salt stress response in an important crop, but we also use our results together with an extensive literature research to highlight some issues commonly observed in salinity stress tolerance studies and to propose solutions for future experiments.

  5. Construction of a full bacterial artificial chromosome (BAC) library of Oryza sativa genome

    Institute of Scientific and Technical Information of China (English)

    TAOQUANZHOU; HAIYINGZHAO; 等

    1994-01-01

    We have constructed a full BAC library for the superior early indica variety of Oryza sativa,Guang Lu Ai 4.The MAX Efficiency DH10B with increased stability of inserts was used as BAC host cells.The potent pBelo BACII with double selection markers was used as cloning vector.The cloning efficiency we have reached was as high as 98%,and the transformation efficiency was raised up to 106 transformants/μg of large fragment DNA.The BAC recombinant transformants were picked at random and analyzed for the size of inserts,which turned out to be of 120 kb in length on average.We have obtained more than 20,000 such BAC clones.According to conventional probability equation,they covered the entire rice genome of 420,000 kb in length.The entire length of inserts of the library obtained has the 5-to 6-fold coverage of the genome.To our knowledge,this is the first reported full BAC library for a complex genome.

  6. Amylolytic activity and carbohydrate levels in relation to coleoptile anoxic elongation in Oryza sativa genotypes.

    Science.gov (United States)

    Pompeiano, Antonio; Fanucchi, Francesca; Guglielminetti, Lorenzo

    2013-11-01

    Among starchy seeds, rice has the unique capacity to germinate successfully under complete anaerobiosis. In this conditions, starch degradation is supported by a complete set of starch-degrading enzymes that are absent or inactive in cereals except rice. A characterization of carbohydrate metabolism and starch-degrading enzyme activity across twenty-nine genotypes of Oryza sativa L. is presented here. The zymogram of amylolytic activities present in rice embryos and endosperms under anaerobic conditions seven days after sowing (DAS) revealed marked differences among cultivars. Coleoptile elongation was positively correlated with total amylolytic activities and α-amylase activity in embryos, and negatively correlated with α-amylase activity in endosperm. Moreover, carbohydrate content in embryos was found to be positively correlated with total amylolytic activities under anaerobic conditions, while a negative relationship was recorded in the endosperm. Carbohydrate status in rice seedlings has a primary importance in sustaining coleoptile elongation towards the surface. The relationship between carbohydrate level in embryo and anoxic germination, as well as with total amylolytic activities present in rice embryo under anaerobic condition 7 DAS, is consistent with the role of sugar metabolism to support rice germination under oxygen-deprived environment.

  7. Biochemical and structural properties of cyanases from Arabidopsis thaliana and Oryza sativa.

    Directory of Open Access Journals (Sweden)

    Dan Qian

    Full Text Available Cyanate is toxic to all organisms. Cyanase converts cyanate to CO₂ and NH₃ in a bicarbonate-dependent reaction. The biophysical functions and biochemical characteristics of plant cyanases are poorly studied, although it has been investigated in a variety of proteobacteria, cyanobacteria and fungi. In this study, we characterised plant cyanases from Arabidopsis thaliana and Oryza sativa (AtCYN and OsCYN. Prokaryotic-expressed AtCYN and OsCYN both showed cyanase activity in vitro. Temperature had a similar influence on the activity of both cyanases, but pH had a differential impact on AtCYN and OsCYN activity. Homology modelling provided models of monomers of AtCYN and OsCYN, and a coimmunoprecipitation assay and gel filtration indicated that AtCYN and OsCYN formed homodecamers. The analysis of single-residue mutants of AtCYN indicated that the conserved catalytic residues also contributed to the stability of the homodecamer. KCNO treatment inhibited Arabidopsis germination and early seedling growth. Plants containing AtCYN or OsCYN exhibited resistance to KCNO stress, which demonstrated that one role of cyanases in plants is detoxification. Transcription level of AtCYN was higher in the flower than in other organs of Arabidopsis. AtCYN transcription was not significantly affected by KCNO treatment in Arabidopsis, but was induced by salt stress. This research broadens our knowledge on plant detoxification of cyanate via cyanase.

  8. Heterologous Expression of AtWRKY57 Confers Drought Tolerance in Oryza sativa.

    Science.gov (United States)

    Jiang, Yanjuan; Qiu, Yuping; Hu, Yanru; Yu, Diqiu

    2016-01-01

    Drought stress is a severe environmental factor that greatly restricts plant distribution and crop production. Recently, we have found that overexpressing AtWRKY57 enhanced drought tolerance in Arabidopsis thaliana. In this study, we further reported that the Arabidopsis WRKY57 transcription factor was able to confer drought tolerance to transgenic rice (Oryza sativa) plants. The enhanced drought tolerance of transgenic rice was resulted from the lower water loss rates, cell death, malondialdehyde contents and relative electrolyte leakage while a higher proline content and reactive oxygen species-scavenging enzyme activities was observed during stress conditions. Moreover, further investigation revealed that the expression levels of several stress-responsive genes were up-regulated in drought-tolerant transgenic rice plants, compared with those in wild-type plants. In addition to the drought tolerance, the AtWRKY57 over-expressing plants also had enhanced salt and PEG stress tolerances. Taken together, our study indicates that over-expressing AtWRKY57 in rice improved not only drought tolerance but also salt and PEG tolerance, demonstrating its potential role in crop improvement.

  9. Heterologous expression of AtWRKY57 confers drought tolerance in Oryza sativa

    Directory of Open Access Journals (Sweden)

    Yanjuan eJiang

    2016-02-01

    Full Text Available Drought stress is a severe environmental factor that greatly restricts plant distribution and crop production. Recently, we have found that overexpressing AtWRKY57 enhanced drought tolerance in Arabidopsis thaliana. In this study, we further reported that the Arabidopsis WRKY57 transcription factor was able to confer drought tolerance to transgenic rice (Oryza sativa plants. The enhanced drought tolerance of transgenic rice was resulted from the lower water loss rates, cell death, malondialdehyde contents and relative electrolyte leakage while a higher proline content and reactive oxygen species-scavenging enzyme activities was observed during stress conditions. Moreover, further investigation revealed that the expression levels of several stress-responsive genes were up-regulated in drought-tolerant transgenic rice plants, compared with those in wild-type plants. In addition to the drought tolerance, the AtWRKY57 over-expressing plants also had enhanced salt and PEG stress tolerances. Taken together, our study indicates that over-expressing AtWRKY57 in rice improved not only drought tolerance but also salt and PEG tolerance, demonstrating its potential role in crop improvement.

  10. Genetic evidence for natural product-mediated plant-plant allelopathy in rice (Oryza sativa).

    Science.gov (United States)

    Xu, Meimei; Galhano, Rita; Wiemann, Philipp; Bueno, Emilio; Tiernan, Mollie; Wu, William; Chung, Ill-Min; Gershenzon, Jonathan; Tudzynski, Bettina; Sesma, Ane; Peters, Reuben J

    2012-02-01

    • There is controversy as to whether specific natural products play a role in directly mediating antagonistic plant-plant interactions - that is, allelopathy. If proved to exist, such phenomena would hold considerable promise for agronomic improvement of staple food crops such as rice (Oryza sativa). • However, while substantiated by the presence of phytotoxic compounds at potentially relevant concentrations, demonstrating a direct role for specific natural products in allelopathy has been difficult because of the chemical complexity of root and plant litter exudates. This complexity can be bypassed via selective genetic manipulation to ablate production of putative allelopathic compounds, but such an approach previously has not been applied. • The rice diterpenoid momilactones provide an example of natural products for which correlative biochemical evidence has been obtained for a role in allelopathy. Here, we apply reverse genetics, using knock-outs of the relevant diterpene synthases (copalyl diphosphate synthase 4 (OsCPS4) and kaurene synthase-like 4 (OsKSL4)), to demonstrate that rice momilactones are involved in allelopathy, including suppressing growth of the widespread rice paddy weed, barnyard grass (Echinochloa crus-galli). • Thus, our results not only provide novel genetic evidence for natural product-mediated allelopathy, but also furnish a molecular target for breeding and metabolic engineering of this important crop plant.

  11. Significant Comparative Characteristics between Orphan and Nonorphan Genes in the Rice (Oryza sativa L. Genome

    Directory of Open Access Journals (Sweden)

    Wen-Jiu Guo

    2007-01-01

    Full Text Available Microsatellites are short tandem repeats of one to six bases in genomic DNA. As microsatellites are highly polymorphic and play a vital role in gene function and recombination, they are an attractive subject for research in evolution and in the genetics and breeding of animals and plants. Orphan genes have no known homologs in existing databases. Using bioinformatic computation and statistical analysis, we identified 19,26 orphan genes in the rice (Oryza sativa ssp. Japanica cv. Nipponbare proteome. We found that a larger proportion of orphan genes are expressed after sexual maturation and under environmental pressure than nonorphan genes. Orphan genes generally have shorter protein lengths and intron size, and are faster evolving. Additionally, orphan genes have fewer PROSITE patterns with larger pattern sizes than those in nonorphan genes. The average microsatellite content and the percentage of trinucleotide repeats in orphan genes are also significantly higher than in nonorphan genes. Microsatellites are found less often in PROSITE patterns in orphan genes. Taken together, these orphan gene characteristics suggest that microsatellites play an important role in orphan gene evolution and expression.

  12. Evolutionary history of Oryza sativa LTR retrotransposons: a preliminary survey of the rice genome sequences

    Directory of Open Access Journals (Sweden)

    Ganko Eric W

    2004-03-01

    Full Text Available Abstract Background LTR Retrotransposons transpose through reverse transcription of an RNA intermediate and are ubiquitous components of all eukaryotic genomes thus far examined. Plant genomes, in particular, have been found to be comprised of a remarkably high number of LTR retrotransposons. There is a significant body of direct and indirect evidence that LTR retrotransposons have contributed to gene and genome evolution in plants. Results To explore the evolutionary history of long terminal repeat (LTR retrotransposons and their impact on the genome of Oryza sativa, we have extended an earlier computer-based survey to include all identifiable full-length, fragmented and solo LTR elements in the rice genome database as of April 2002. A total of 1,219 retroelement sequences were identified, including 217 full-length elements, 822 fragmented elements, and 180 solo LTRs. In order to gain insight into the chromosomal distribution of LTR-retrotransposons in the rice genome, a detailed examination of LTR-retrotransposon sequences on Chromosome 10 was carried out. An average of 22.3 LTR-retrotransposons per Mb were detected in Chromosome 10. Conclusions Gypsy-like elements were found to be >4 × more abundant than copia-like elements. Eleven of the thirty-eight investigated LTR-retrotransposon families displayed significant subfamily structure. We estimate that at least 46.5% of LTR-retrotransposons in the rice genome are older than the age of the species (

  13. Prediction and Expression Analysis of miRNAs Associated with Heat Stress in Oryza sativa

    Institute of Scientific and Technical Information of China (English)

    B.SAILAJA; S.R.VOLETI; D.SUBRAHMANYAM; N.SARLA; V.VISHNU PRASANTH; V.P.BHADANA; S.K.MANGRAUTHIA

    2014-01-01

    Computational prediction of potential microRNAs (miRNAs) and their target genes was performed to identify the miRNAs and genes associated with temperature response in rice. The data of temperature-responsive miRNAs of Arabidopsis, and miRNAs and the whole genome data of rice were used to predict potential miRNAs in Oryza sativa involved in temperature response. A total of 55 miRNAs were common in both the species, and 27 miRNAs were predicted at the first time in rice. Target genes were searched for these 27 miRNAs in rice genome following stringent criteria. Real time PCR based on expression analysis of nine miRNAs showed that majority of the miRNAs were down regulated under heat stress for rice cultivar Nagina 22. Furthermore, miR169, miR1884 and miR160 showed differential expression in root and shoot tissues of rice. Identification and expression studies of miRNAs during heat stress will advance the understanding of gene regulation under stress in rice.

  14. Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa.

    Science.gov (United States)

    Liang, Xuejiao; Qin, Lu; Liu, Peiwei; Wang, Meihuan; Ye, Hong

    2014-03-01

    Iron-sulphur (Fe-S) cluster assembly occurs in chloroplasts, mitochondria and cytosol, involving dozens of genes in higher plants. In this study, we have identified 41 putative Fe-S cluster assembly genes in rice (Oryza sativa) genome, and the expression of all genes was verified. To investigate the role of Fe-S cluster assembly as a metabolic pathway, we applied abiotic stresses to rice seedlings and analysed Fe-S cluster assembly gene expression by qRT-PCR. Our data showed that genes for Fe-S cluster assembly in chloroplasts of leaves are particularly sensitive to heavy metal treatments, and that Fe-S cluster assembly genes in roots were up-regulated in response to iron toxicity, oxidative stress and some heavy metal assault. The effect of each stress treatment on the Fe-S cluster assembly machinery demonstrated an unexpected tissue or organelle specificity, suggesting that the physiological relevance of the Fe-S cluster assembly is more complex than thought. Furthermore, our results may reveal potential candidate genes for molecular breeding of rice.

  15. QTL detection and elite alleles mining for stigma traits in Oryza sativa by association mapping

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    Xiaojing Dang

    2016-08-01

    Full Text Available Stigma traits are very important for hybrid seed production in Oryza sativa, which is a self-pollinated crop; however, the genetic mechanism controlling the traits is poorly understood. In this study, we investigated the phenotypic data of 227 accessions across two years and assessed their genotypic variation with 249 simple sequence repeat (SSR markers. By combining phenotypic and genotypic data, a genome-wide association (GWA map was generated. Large phenotypic variations in stigma length (STL, stigma brush-shaped part length (SBPL and stigma non-brush-shaped part length (SNBPL were found. Significant positive correlations were identified among stigma traits. In total, 2,072 alleles were detected among 227 accessions, with an average of 8.3 alleles per SSR locus. GWA mapping detected 6 quantitative trait loci (QTLs for the STL, 2 QTLs for the SBPL and 7 QTLs for the SNBPL. Eleven, 5, and 12 elite alleles were found for the STL, SBPL and SNBPL, respectively. Optimal cross designs were predicted for improving the target traits. The detected genetic variation in stigma traits and QTLs provides helpful information for cloning candidate STL genes and breeding rice cultivars with longer STLs in the future.

  16. An improved Agrobacterium-mediated transformation of recalcitrant indica rice (Oryza sativa L.) cultivars.

    Science.gov (United States)

    Shri, Manju; Rai, Arti; Verma, Pankaj Kumar; Misra, Prashant; Dubey, Sonali; Kumar, Smita; Verma, Sikha; Gautam, Neelam; Tripathi, Rudra Deo; Trivedi, Prabodh Kumar; Chakrabarty, Debasis

    2013-04-01

    Agrobacterium-mediated transformation of indica rice varieties has been quite difficult as these are recalcitrant to in vitro responses. In the present study, we established a high-efficiency Agrobacterium tumefaciens-mediated transformation system of rice (Oryza sativa L. ssp. indica) cv. IR-64, Lalat, and IET-4786. Agrobacterium strain EHA-101 harboring binary vector pIG121-Hm, containing a gene encoding for β-glucuronidase (GUS) and hygromycin resistance, was used in the transformation experiments. Manipulation of different concentrations of acetosyringone, days of co-culture period, bacterial suspension of different optical densities (ODs), and the concentrations of L-cysteine in liquid followed by solid co-culture medium was done for establishing the protocol. Among the different co-culture periods, 5 days of co-culture with bacterial cells (OD600 nm = 0.5-0.8) promoted the highest frequency of transformation (83.04 %) in medium containing L-cysteine (400 mg l(-1)). Putative transformed plants were analyzed for the presence of a transgene through genomic PCR and GUS histochemical analyses. Our results also suggest that different cultural conditions and the addition of L-cysteine in the co-culture medium improve the Agrobacterium-mediated transformation frequencies from an average of 12.82 % to 33.33 % in different indica rice cultivars.

  17. Control of brown spot pathogen of rice (Bipolaris oryzae using some phenolic antioxidants Controle da macha-parda do arroz (Bipolaris oryzae pelo emprego de antioxidantes fenólicos

    Directory of Open Access Journals (Sweden)

    Y.M. Shabana

    2008-09-01

    Full Text Available Bipolaris oryzae is the causal agent of rice brown spot disease and is responsible for significant economic losses. In order to control this disease, three phenolic antioxidants were tested (salicylic acid, benzoic acid and hydroquinone. The antifungal activity of the tested substances were investigated against B. oryzae at different concentrations in vitro, as well as the efficacy of their exogenous application in controlling rice brown spot disease under field conditions. In vitro, benzoic acid or salicylic acid at 9 mM completely inhibited the growth of B. oryzae. Under field conditions, spraying of benzoic acid at 20 mM led to a significant reduction in disease severity (DS and disease incidence (DI on the plant leaves, in addition to a significant increase in the grain yield and its components. Some biochemical responses were also detected, where the application of the previous treatment led to a significant increase in the total photosynthetic pigments (chlorophyll a and b and carotenoids in rice leaves and in the total carbohydrate and protein contents of the yielded grains.Bipolaris oryzae é o agente causador da doença mancha-parda do arroz e é responsável por significativas perdas econômicas. Três antioxidantes fenólicos (ácido salicílico, ácido benzóico e hidroquinona foram avaliados para o controle dessa doença do arroz. A atividade antifúngica destes compostos foi avaliada in vitro contra B. oryzae em diferentes concentrações e a eficiência de sua aplicação exógena no controle da mancha-parda foi avaliada em condições de campo. Nos ensaios in vitro, os ácidos benzóico e salicílico a 9 mM inibiram completamente a multiplicação de B. oryzae. Em condições de campo, a aspersão de ácido benzóico a 20 mM causou uma redução significativa na gravidade e incidência da doença na folhas da planta, além de aumentar significativamente o rendimento dos grãos e seus componentes. Algumas respostas bioqu

  18. Genetic analysis and gene mapping of a rice few-tillering mutant in early backcross populations (Oryza sativa L.)

    Institute of Scientific and Technical Information of China (English)

    TANG; Jiabin; (

    2001-01-01

    [1]Xu, Y. B., Shen, Z. T., Diallel analysis of tiller number at different growth stages in rice (Oryza sativa L.), Theoretical and Applied Genetics, 1991, 83(2): 243-249.[2]Wu, W. R., Li, W. M., Tang, D. Z. et al., Time-related mapping of quantitative trait loci underlying tiller number in rice, Genetics, 1999, (151): 297-303.[3]Wu, P., Zhang, G ., Huang, N., Identification of QTLs controlling quantitative characters in rice using RFLP markers, Euphytica, 1996, 89(3): 349-354.[4]Khush, G . S., Breaking the yield frontier of rice, GeoJournal, 1995, 35(3): 329-332.[5]Chen, X., Themnykh, S., Xu, Y. et al., Development of microsatellite framework providing genome-wide coverage in rice (Oryzae sativa L.), Theoretical and Applied Genetics, 1997, 95(4): 553-567.[6]Panaud, O., Chen, X., McCouch, S. R. et al., Development of microsatellite markers and characterization of simple sequence length polymorphisms (SSLPs) in rice (Oryzae sativa L.), Molecular and General Genetics, 1996, (252): 597-607.[7]McCouth, S. R., Kochert, G., Yu, Z. H. et al., Molecular mapping of rice chromosomes, Theoretical and Applied Genetics, 1988, 76: 815-829.[8]Harushima, Y., Yano, M., Shomura, A. et al., A high-density rice genetic linkage map with 2275 markers using a single F2 population, Genetics, 1998, 148: 479-494.[9]Lander, E. S. et al., Mapmaker: An interactive computer for construction primary genetics linkage maps of experimental and natural populations, Genomics, 1987, (1): 174-182.[10]Kinoshita, T., Report of committee on gene symbolization, nomenclature and linkage groups, Rice Genetic Newsletter, 1995, (12): 9-153.

  19. Identification of β-phenylalanine as a non-protein amino acid in cultivated rice, Oryza sativa.

    Science.gov (United States)

    Yokoo, Takayuki; Takata, Ryo; Yan, Jian; Matsumoto, Fuka; Teraishi, Masayoshi; Okumoto, Yutaka; Jander, Georg; Mori, Naoki

    2015-01-01

    Non-protein amino acids, often analogs of the standard 20 protein amino acids, have been discovered in many plant species. Recent research with cultivated rice (Oryza sativa) identified (3R)-β-tyrosine, as well as a tyrosine amino mutase that synthesizes (3R)-β-tyrosine from the protein amino acid (2S)-α-tyrosine. Gas chromatography-mass spectrometry (GC-MS) assays and comparison to an authentic standard showed that β-phenylalanine is also a relatively abundant non-protein amino acid in rice leaves and that its biosynthesis occurs independently from that of β-tyrosine.

  20. The ability on hydraulic-lift from deeper rooted plants with a phytoassay of rice (Oryza sativa L.)

    OpenAIRE

    2009-01-01

    Hydraulic lift(HL), the exudation of water from root system of deeper rooted plants under soil desiccated conditions is considered as a potential irrigation system in drought areas. The ability of HL in sorghum(Sorghum bicolor(L.)Moench)was evaluated by a split root experiment with mixed-cropped rice(Oryza sativa L.)as an indicator plant for phytoassay. Growth parameters of rice and soil water conditions are measured after withholding irrigation with or without sorghum root connection between...

  1. Spectral response of rice(Oryza sativa L.) leaves to Fe2+ stress

    Institute of Scientific and Technical Information of China (English)

    2009-01-01

    In the management of lake eutrophication,the regulation effect of Fe is considered,in addition to the controlling nitrogen-and phosphorus input.Based on the "Fe hypothesis",this paper tentatively applied plant spectral response to the remote sensing early-warning mechanism of lake eutrophication.A laboratory water culture experiment with rice(Oryza sativa L.) was conducted to study Fe uptake by plants and the chlorophyll concentration and visible-near infrared spectrum of vegetable leaves as well as their interrelations under Fe2+ stress.Three spectral indices,i.e.,A1(integral value of the changes of spectral reflectivity in the range 460―670 nm under Fe2+ stress),A2(integral value of the changes of spectral reflectivity in the range of 760―1000 nm under Fe2+ stress) and S(blue-shift range of red edge curve under Fe2+ stress),were used to establish quantitative models about the relationships between the rice leaf spectrum and Fe2+ stress.With the increase of Fe2+ in a culture solution,the Fe content in rice plants increased,while the chlorophyll concentration in vegetative leaves decreased.The spectral reflectivity of vegetable leaves increased in the visible light band but decreased in the near infrared band,and the blue-shift range of the red edge curve increased.The indices A1,A2 and S all had significant correlations with the Fe content in rice leaves,the correlation coefficient being respectively 0.951(P < 0.01),?0.988(P < 0.01) and 0.851(P < 0.01),and simulated(multiple correlation coefficients R2 > 0.96) and predict the Fe level in rice leaves.

  2. Engineering the Oryza sativa cell wall with rice NAC transcription factors regulating secondary wall formation

    Directory of Open Access Journals (Sweden)

    Kouki eYoshida

    2013-10-01

    Full Text Available Plant tissues that require structural rigidity synthesize a thick, strong secondary cell wall of lignin, cellulose and hemicelluloses in a complicated bridged structure. Master regulators of secondary wall synthesis were identified in dicots, and orthologs of these regulators have been identified in monocots, but regulation of secondary cell wall formation in monocots has not been extensively studied. Here we demonstrate that the rice transcription factors SECONDARY WALL NAC DOMAIN PROTEINs (SWNs can regulate secondary wall formation in rice (Oryza sativa and are potentially useful for engineering the monocot cell wall. The OsSWN1 promoter is highly active in sclerenchymatous cells of the leaf blade and less active in xylem cells. By contrast, the OsSWN2 promoter is highly active in xylem cells and less active in sclerenchymatous cells. OsSWN2 splicing variants encode two proteins; the shorter protein (OsSWN2S has very low transcriptional activation ability, but the longer protein (OsSWN2L and OsSWN1 have strong transcriptional activation ability. In rice, expression of an OsSWN2S chimeric repressor, driven by the OsSWN2 promoter, resulted in stunted growth and para-wilting (leaf rolling and browning under normal water conditions due to impaired vascular vessels. The same OsSWN2S chimeric repressor, driven by the OsSWN1 promoter, caused a reduction of cell wall thickening in sclerenchymatous cells, a drooping leaf phenotype, reduced lignin and xylose contents and increased digestibility as forage. These data suggest that OsSWNs regulate secondary wall formation in rice and manipulation of OsSWNs may enable improvements in monocotyledonous crops for forage or biofuel applications.

  3. Arsenite tolerance is related to proportional thiolic metabolite synthesis in rice (Oryza sativa L.).

    Science.gov (United States)

    Dave, Richa; Singh, Pradyumna Kumar; Tripathi, Preeti; Shri, Manju; Dixit, Garima; Dwivedi, Sanjay; Chakrabarty, Debasis; Trivedi, Prabodh Kumar; Sharma, Yogesh Kumar; Dhankher, Om Prakash; Corpas, Francisco Javier; Barroso, Juan B; Tripathi, Rudra Deo

    2013-02-01

    Thiol metabolism is the primary detoxification strategy by which rice plants tolerate arsenic (As) stress. In light of this, it is important to understand the importance of harmonised thiol metabolism with As accumulation and tolerance in rice plant. For this aim, tolerant (T) and sensitive (S) genotypes were screened from 303 rice (Oryza sativa) genotypes on exposure to 10 and 25 μM arsenite (As(III)) in hydroponic culture. On further As accumulation estimation, contrasting (13-fold difference) T (IC-340072) and S (IC-115730) genotypes were selected. This difference was further evaluated using biochemical and molecular approaches to understand involvement of thiolic metabolism vis-a-vis As accumulation in these two genotypes. Various phytochelatin (PC) species (PC(2), PC(3) and PC(4)) were detected in both the genotypes with a dominance of PC(3). However, PC concentrations were greater in the S genotype, and it was noticed that the total PC (PC(2) + PC(3 )+ PC(4))-to-As(III) molar ratio (PC-SH:As(III)) was greater in T (2.35 and 1.36 in shoots and roots, respectively) than in the S genotype (0.90 and 0.15 in shoots and roots, respectively). Expression analysis of several metal(loid) stress-related genes showed significant upregulation of glutaredoxin, sulphate transporter, and ascorbate peroxidase in the S genotype. Furthermore, enzyme activity of phytochelatin synthase and cysteine synthase was greater on As accumulation in the S compared with the T genotype. It was concluded that the T genotype synthesizes adequate thiols to detoxify metalloid load, whereas the S genotype synthesizes greater but inadequate levels of thiols to tolerate an exceedingly greater load of metalloids, as evidenced by thiol-to-metalloid molar ratios, and therefore shows a phytotoxicity response.

  4. A draft sequence of the rice(Oryza sativa ssp. indica) genome

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    The sequence of the rice genome holds fundamental information for its biology, including physiology, genetics, development, and evolution, as well as information on many beneficial phenotypes of economic significance. Using a "whole genome shotgun" approach, we have produced a draft rice genome sequence of Oryza sativa ssp. indica, the major crop rice subspecies in China and many other regions of Asia. The draft genome sequence is constructed from over 4.3 million successful sequencing traces with an accumulative total length of 2214.9 Mb. The initial assembly of the non-redundant sequences reached 409.76 Mb in length, based on 3.30 million successful sequencing traces with a total length of 1797.4 Mb from an indica variant cultivar 93-11, giving an estimated coverage of 95.29% of the rice genome with an average base accuracy of higher than 99%. The coverage of the draft sequence, the randomness of the sequence distribution, and the consistency of BIG-ASSEM- BLER, a custom-designed software package used for the initial assembly, were verified rigorously by comparisons against finished BAC clone sequences from both indica and japanica strains, available from the public databases. Over all, 96.3% of full-length cDNAs, 96.4% of STS, STR, RFLP markers, 94.0% of ESTs and 94.9% unigene clusters were identified from the draft sequence. Our preliminary analysis on the data set shows that our rice draft sequence is consistent with the comman standard accepted by the genome sequencing community. The unconditional release of the draft to the public also undoubtedly provides a fundamental resource to the international scientific communities to facilitate genomic and genetic studies on rice biology.

  5. Characterization of High-Value Bioactives in Some Selected Varieties of Pakistani Rice (Oryza sativa L.

    Directory of Open Access Journals (Sweden)

    Md. Kamal Uddin

    2012-04-01

    Full Text Available The present study reports the composition and variation of fatty acids, sterols, tocopherols and γ-oryzanol among selected varieties namely Basmati Super, Basmati 515, Basmati 198, Basmati 385, Basmati 2000, Basmati 370, Basmati Pak, KSK-139, KS-282 and Irri-6 of Pakistani rice (Oryza sativa L. Oil content extracted with n-hexane from different varieties of brown rice seed (unpolished rice ranged from 1.92% to 2.72%. Total fatty acid contents among rice varieties tested varied between 18240 and 25840 mg/kg brown rice seed. The rice tested mainly contained oleic (6841–10952 mg/kg linoleic (5453–7874 mg/kg and palmitic acid (3613–5489 mg/kg. The amounts of total phytosterols (GC and GC-MS analysis, with main contribution from β-sitosterol (445–656 mg/kg, campesterol (116–242 mg/kg, ∆5-avenasterol (89–178 mg/kg and stigmasterol (75–180 mg/kg were established to be 739.4 to 1330.4 mg/kg rice seed. The content of α-, γ- and δ-tocopherols as analyzed by HPLC varied from 39.0–76.1, 21.6–28.1 and 6.5–16.5 mg/kg rice seed, respectively. The amounts of different γ-oryzanol components (HPLC data, identified as cycloartenyl ferulate, 24-methylene cycloartanyl ferulate, campesteryl ferulate and β-sitosteryl ferulate, were in the range of 65.5–103.6, 140.2–183.1, 29.8–45.5 and 8.6–10.4 mg/kg rice seed, respectively. Overall, the concentration of these bioactives was higher in the Basmati rice cultivars showing their functional food superiority. In conclusion, the tested varieties of Pakistani rice, especially the Basmati cultivars, can provide best ingredients for functional foods.

  6. Changes in gene expression and catalase activity in Oryza sativa L. under abiotic stress.

    Science.gov (United States)

    Vighi, I L; Benitez, L C; do Amaral, M N; Auler, P A; Moraes, G P; Rodrigues, G S; da Maia, L C; Pinto, L S; Braga, E J B

    2016-11-03

    Different rice (Oryza sativa L.) genotypes were subjected to high salinity and low temperature (150 mM NaCl and 13°C, respectively) for 0, 6, 24, 48, or 72 h. We evaluated the simultaneous expression of the genes OsCATA, OsCATB, and OsCATC, correlated gene expression with enzyme activity, and verified the regulation of these genes through identification of cis-elements in the promoter region. The hydrogen peroxide content increased in a tolerant genotype and decreased in a sensitive genotype under both stress conditions. Lipid peroxidation increased in the tolerant genotype when exposed to cold, and in the sensitive genotype when exposed to high salinity. Catalase activity significantly increased in both genotypes when subjected to 13°C. In the tolerant genotype, OsCATA and OsCATB were the most responsive to high salinity and cold, while in the sensitive genotype, OsCATA and OsCATC responded positively to saline stress, as did OsCATA and OsCATB to low temperature. Cis-element analysis identified different regulatory sequences in the catalase promoter region of each genotype. The sensitive genotype maintained a better balance between hydrogen oxyacid levels, catalase activity, and lipid peroxidation under low temperature than the resistant genotype. OsCATA and OsCATB were the most responsive in the salt-tolerant genotype to cold, OsCATA and OsCATC were the most responsive to saline stress, and OsCATA and OsCATB were the most responsive to chilling stress in the sensitive genotype. There were positive correlations between catalase activity and OsCATB expression in the tolerant genotype under saline stress and in the sensitive genotype under cold stress.

  7. Silicon-Mediated Amelioration of Fe2+ Toxicity in Rice (Oryza sativa L.) Roots

    Institute of Scientific and Technical Information of China (English)

    FU You-Qiang; SHEN Hong; WU Dao-Ming; CAI Kun-Zheng

    2012-01-01

    Silicon (Si) can enhance the resistance of plants to many abiotic stresses. To explore whether Si ameliorates Fe2+ toxicity,a hydroponic experiment was performed to investigate whether and how Si detoxifies Fe2+ toxicity in rice (Oryza sativa L.) roots.Results indicated that rice cultivar Tianyou 998 (TY998) showed greater sensitivity to Fe2+ toxicity than rice cultivar Peizataifeng (PZTF).Treatment with 0.1 mmol L-1 Fe2+ inhibited TY998 root elongation and root biomass significantly.Reddish iron plaque was formed on root surface of both cultivars.TY998 had a higher amount of iron plaque than PZTF.Addition of Si to the solution of Fe treatment decreased the amount of iron plaque on root surface by 17.6% to 37.1% and iron uptake in rice roots by 37.0% to 40.3%,and subsequently restored root elongation triggered by Fe2+ toxicity by 13.5% in the TY998.Compared with Fe treatment,the addition of 1 mmol L-1 Si to the solution of Fe treatment increased xylem sap flow by 19.3% to 24.8% and root-shoot Fe transportation by 45.0% to 78.6%.Furthermore,Si addition to the solution of Fe treatment induced root cell wall to thicken.These results suggested that Si could detoxify Fe2+ toxicity and Si-mediated amelioration of Fe2+ toxicity in rice roots was associated with less iron plaque on root surface and more Fe transportation from roots to shoots.

  8. Transformation of indica rice (Oryza sativa L. cv. RD6 mediated by Agrobacterium tumefaciens

    Directory of Open Access Journals (Sweden)

    Manit Kosittrakul

    2004-01-01

    Full Text Available High percentage of callus induction at 97% was obtained when seeds of rice (Oryza sativa L. cv. RD6 were cultured on modified N6 medium supplemented with 3% (w/v sucrose, 22.5 μM 2,4-D and 0.8% agar under light condition. The suitable regeneration medium was N6 medium supplemented with 3% (w/v sucrose, 2.5 μM IAA, 18 μM BA and 0.8% agar. A test had been performed to determine the effect of antibiotics on the regeneration of rice cv. RD6. It was found that kanamycin concentration up to 150 mg l-1 and hygromycin concentration at 10 mg l-1 were effective for selection of transformants. Cefotaxime and carbenicillin concentration up to 250 mg l-1 had the highest phytotoxicity to plant regeneration. Agrobacterium-mediated gene transfer protocols for rice cv. RD6 were performed using A. tumefaciens strain LBA4404, which harbored the plasmid pBI121 containing genes for β- glucuronidase (GUS and kanamycin resistance (nptII, and strain EHA105, which harbored plasmid pCAMBIA1301 containing genes for β-glucuronidase (GUS and hygromycin resistance (hptII. GUS activities were found in rice calli after co-cultivation. A number of morphologically normal fertile transgenic rice plants were obtained. Stable integration, expression and inheritance of transgenes were demonstrated by molecular and genetic analysis of transgenic plants in T0 and T1 generation. Mendelian segregation was observed in T1 progeny.

  9. Biological Caharacteristics of Methane Emission of Oryza sativa,Pancium crus—galli and Cyperus difformis Grown on Paddy Soil

    Institute of Scientific and Technical Information of China (English)

    MINHANG; CHENMEI-CI; 等

    1994-01-01

    Biological characteristics of methane emission were compared among Oryza sativa,Panicum crus-galli and Cyperus difformis grown on paddy soil.The order of the amounts of methane emitted was P.crus-galli>O.sativa>C.difformis,with the former two 11 and 8 times as much as that of the latter,respectively.And it was just opposite to that of the methane-forming activities of roots of the three plants.The diurnal changes of methane emission of the three plants were relatively consistent with valleys during 11:00-14:00 and midnight and peaks during 8:00-11:00,14:00-20:00 and about 5:00 early morning.The methanogeic activites in rhizospheric soils were higher than those in nonrhizospheric soils with P.crus-galli and O.sativa,but not with C.difformis.The pathways of methane release of P.crus-galli and O.sativa were probably through the top gaps near the junctions of nodal plate and leaf sheath;how ever in C.difformis top gaps from which methanc could escape into atmosphere were not found.

  10. Combination Patterns of Major R Genes Determine the Level of Resistance to the M. oryzae in Rice (Oryza sativa L..

    Directory of Open Access Journals (Sweden)

    Yunyu Wu

    Full Text Available Rice blast caused by Magnaporthe oryzae is the most devastating disease of rice and poses a serious threat to world food security. In this study, the distribution and effectiveness of 18 R genes in 277 accessions were investigated based on pathogenicity assays and molecular markers. The results showed that most of the accessions exhibited some degree of resistance (resistance frequency, RF >50%. Accordingly, most of the accessions were observed to harbor two or more R genes, and the number of R genes harbored in accessions was significantly positively correlated with RF. Some R genes were demonstrated to be specifically distributed in the genomes of rice sub-species, such as Pigm, Pi9, Pi5 and Pi1, which were only detected in indica-type accessions, and Pik and Piz, which were just harbored in japonica-type accessions. By analyzing the relationship between R genes and RF using a multiple stepwise regression model, the R genes Pid3, Pi5, Pi9, Pi54, Pigm and Pit were found to show the main effects against M. oryzae in indica-type accessions, while Pita, Pb1, Pik, Pizt and Pia were indicated to exhibit the main effects against M. oryzae in japonica-type accessions. Principal component analysis (PCA and cluster analysis revealed that combination patterns of major R genes were the main factors determining the resistance of rice varieties to M. oryzae, such as 'Pi9+Pi54', 'Pid3+Pigm', 'Pi5+Pid3+Pigm', 'Pi5+Pi54+Pid3+Pigm', 'Pi5+Pid3' and 'Pi5+Pit+Pid3' in indica-type accessions and 'Pik+Pib', 'Pik+Pita', 'Pik+Pb1', 'Pizt+Pia' and 'Pizt+Pita' in japonica-type accessions, which were able to confer effective resistance against M. oryzae. The above results provide good theoretical support for the rational utilization of combinations of major R genes in developing rice cultivars with broad-spectrum resistance.

  11. Oryza sativa Chloroplast Signal Recognition Particle 43 (OscpSRP43) Is Required for Chloroplast Development and Photosynthesis.

    Science.gov (United States)

    Lv, Xiang-guang; Shi, Yong-feng; Xu, Xia; Wei, Yan-lin; Wang, Hui-mei; Zhang, Xiao-bo; Wu, Jian-li

    2015-01-01

    A rice chlorophyll-deficient mutant w67 was isolated from an ethyl methane sulfonate (EMS)-induced IR64 (Oryza sativa L. ssp. indica) mutant bank. The mutant exhibited a distinct yellow-green leaf phenotype in the whole plant growth duration with significantly reduced levels of chlorophyll and carotenoid, impaired chloroplast development and lowered capacity of photosynthesis compared with the wild-type IR64. Expression of a number of genes associated with chlorophyll metabolism, chloroplast biogenesis and photosynthesis was significantly altered in the mutant. Genetic analysis indicated that the yellow-green phenotype was controlled by a single recessive nuclear gene located on the short arm of chromosome 3. Using map-based strategy, the mutation was isolated and predicted to encode a chloroplast signal recognition particle 43 KD protein (cpSRP43) with 388 amino acid residuals. A single base substitution from A to T at position 160 resulted in a premature stop codon. OscpSRP43 was constitutively expressed in various organs with the highest level in the leaf. Functional complementation could rescue the mutant phenotype and subcellular localization showed that the cpSRP43:GFP fusion protein was targeted to the chloroplast. The data suggested that Oryza sativa cpSRP43 (OscpSRP43) was required for the normal development of chloroplasts and photosynthesis in rice.

  12. Experimental and genomic evidence for theindica-type cytoplasmic effect inOryza sativa L. ssp.japonica

    Institute of Scientific and Technical Information of China (English)

    LIU You-hong; TANG Liang; XU Quan; MA Dian-rong; ZHAO Ming-hui; SUN Jian; CHEN Wen-fu

    2016-01-01

    Cytoplasmic effects are important agronomical phenomena that have generated widespread interest in both theory and application. In the present study, ifve high yield rice cultivars (Oryza sativa L. ssp.japonica) in large-scale cultivation in northeast China were determined to possessOryza sativa L. ssp.indica-type cytoplasmusing cytoplasmic subspecies-spe-ciifc molecular markers. This was conifrmed by cytoplasmic genome-wide single nucleotide polymorphisms (SNPs) and functional gene sequencing. Two of these ifvejaponicacultivars were core breeding parents with high yield and the other three were super-high-yield varieties registered by the Ministry of Agriculture of China. We constructed nuclear substitution lines to further demonstrate whether and how thisindica-type cytoplasm contributed to yield improvement by comparing yield components. The results showed that under the samejaponicanuclear background, the lines withindica-type cytoplasm had a signiifcant decrease in tilers in exchange for increased grain number per panicle compared with their recurrent parents. Our results implied that botanical basis of this cytoplasmic effect was to reduce the plant’s branching differentiation to pro-duce more lforal organs under the constant nutrition. Our ifndings open another door for the utilization of inter-subspeciifc hybridization for the improvement of rice cultivar.

  13. Oryza sativa Chloroplast Signal Recognition Particle 43 (OscpSRP43 Is Required for Chloroplast Development and Photosynthesis.

    Directory of Open Access Journals (Sweden)

    Xiang-guang Lv

    Full Text Available A rice chlorophyll-deficient mutant w67 was isolated from an ethyl methane sulfonate (EMS-induced IR64 (Oryza sativa L. ssp. indica mutant bank. The mutant exhibited a distinct yellow-green leaf phenotype in the whole plant growth duration with significantly reduced levels of chlorophyll and carotenoid, impaired chloroplast development and lowered capacity of photosynthesis compared with the wild-type IR64. Expression of a number of genes associated with chlorophyll metabolism, chloroplast biogenesis and photosynthesis was significantly altered in the mutant. Genetic analysis indicated that the yellow-green phenotype was controlled by a single recessive nuclear gene located on the short arm of chromosome 3. Using map-based strategy, the mutation was isolated and predicted to encode a chloroplast signal recognition particle 43 KD protein (cpSRP43 with 388 amino acid residuals. A single base substitution from A to T at position 160 resulted in a premature stop codon. OscpSRP43 was constitutively expressed in various organs with the highest level in the leaf. Functional complementation could rescue the mutant phenotype and subcellular localization showed that the cpSRP43:GFP fusion protein was targeted to the chloroplast. The data suggested that Oryza sativa cpSRP43 (OscpSRP43 was required for the normal development of chloroplasts and photosynthesis in rice.

  14. Cloning and Characterization of Purple Acid Phosphatase Phytases from Wheat (Triticum aestivum L.), Barley (Hordeum vulgare L.), Maize (Zea maize L.) and Rice (Oryza sativa L.)

    DEFF Research Database (Denmark)

    Dionisio, Giuseppe; Madsen, Claus Krogh; Holm, Preben Bach;

    2011-01-01

    Barley (Hordeum vulgare L.) and wheat (Triticum aestivum L.) possess a significant phytase activity in the mature grains. Maize (Zea mays L.) and rice (Oryza sativa L.) possess little or virtually no pre-formed phytase activity in the mature grain and depend fully on de novo synthesis during...

  15. Fine mapping and introgressing qFIS1-2, a major QTL for kernel fissure resistance in rice (Oryza sativa L.)

    Science.gov (United States)

    Rice (Oryza sativa L.) kernel fissuring increases breakage during milling and decreases the value of processed rice. This study employed molecular gene tagging methods to fine-map a fissure resistance (FR) locus in ‘Cybonnet’, a semidwarf tropical japonica cultivar, as well as transfer this trait to...

  16. Quantitative Genetic Analysis for Yield and Yield Components in Boro Rice (Oryza sativa L.

    Directory of Open Access Journals (Sweden)

    Supriyo CHAKRABORTY

    2010-03-01

    Full Text Available Twenty-nine genotypes of boro rice (Oryza sativa L. were grown in a randomized block design with three replications in plots of 4m x 1m with a crop geometry of 20 cm x 20 cm between November-April, in Regional Agricultural Research Station, Nagaon, India. Quantitative data were collected on five randomly selected plants of each genotype per replication for yield/plant, and six other yield components, namely plant height, panicles/plant, panicle length, effective grains/panicle, 100 grain weight and harvest index. Mean values of the characters for each genotype were used for analysis of variance and covariance to obtain information on genotypic and phenotypic correlation along with coheritability between two characters. Path analyses were carried out to estimate the direct and indirect effects of boro rice�s yield components. The objective of the study was to identify the characters that mostly influence the yield for increasing boro rice productivity through breeding program. Correlation analysis revealed significant positive genotypic correlation of yield/plant with plant height (0.21, panicles/plant (0.53, panicle length (0.53, effective grains/panicle (0.57 and harvest index (0.86. Path analysis based on genotypic correlation coefficients elucidated high positive direct effect of harvest index (0.8631, panicle length (0.2560 and 100 grain weight (0.1632 on yield/plant with a residual effect of 0.33. Plant height and panicles/plant recorded high positive indirect effect on yield/plant via harvest index whereas effective grains/panicle on yield/plant via harvest index and panicle length. Results of the present study suggested that five component characters, namely harvest index, effective grains/plant, panicle length, panicles/plant and plant height influenced the yield of boro rice. A genotype with higher magnitude of these component characters could be either selected from the existing genotypes or evolved by breeding program for genetic

  17. Effects of silicon on Oryza sativa L. seedling roots under simulated acid rain stress.

    Science.gov (United States)

    Ju, Shuming; Yin, Ningning; Wang, Liping; Zhang, Cuiying; Wang, Yukun

    2017-01-01

    Silicon (Si) has an important function in reducing the damage of environmental stress on plants. Acid rain is a serious abiotic stress factor, and Si can alleviate the stress induced by acid rain on plants. Based on these assumptions, we investigated the effects of silicon on the growth, root phenotype, mineral element contents, hydrogen peroxide (H2O2) and antioxidative enzymes of rice (Oryza sativa L.) seedling roots under simulated acid rain (SAR) stress. The results showed that the combined or single effects of Si and/or SAR on rice roots depend on the concentration of Si and the pH of the SAR. The combined or single effects of a low or moderate concentration of Si (1.0 or 2.0 mM) and light SAR (pH 4.0) enhanced the growth of rice roots, and the combined effects were stronger than those of the single treatment. A high concentration of Si (4.0 mM) or severe SAR (pH 2.0) exerted deleterious effects. The incorporation of Si (1.0, 2.0 or 4.0 mM) into SAR with pH 3.0 or 2.0 promoted the rice root growth, decreased the H2O2 content, increased the Si concentration and the superoxide dismutase (SOD), catalase (CAT), peroxidase (POD) and ascorbate peroxidase (APX) activities, maintained the balance of mineral element (K, Ca, Mg, Fe, Zn, and Cu) concentrations in the roots of rice seedlings compared with SAR alone. The alleviatory effects observed with a moderate concentration of Si (2.0 mM) were better than the effects obtained with a low or high concentration of Si (1.0 or 4.0 mM). The observed effects were due to disruptions in the absorption and utilization of mineral nutrients and impacts on the activity of antioxidant enzymes in roots, and this conclusion suggests that the degree of rice root damage caused by acid rain might be attributed to not only acid rain but also the level of Si in the soil.

  18. Controle químico de arroz-vermelho na cultura do arroz irrigado Red rice chemical control in irrigated rice

    Directory of Open Access Journals (Sweden)

    F.M. Santos

    2007-01-01

    Full Text Available A ocorrência de arroz-vermelho (Oryza spp. em áreas de arroz irrigado reduz a produtividade de grãos da lavoura e a qualidade do produto colhido. Em vista disso, desenvolveu-se um experimento com o objetivo de comparar duas ferramentas para controle do arroz-vermelho: uma usando o Sistema Clearfield e outra utilizando doses elevadas de clomazone em sementes tratadas com protetor para supressão de arroz-vermelho. Os tratamentos constituíram-se de uma testemunha, sem aplicação de herbicida, três referentes à aplicação da mistura formulada (75 g i.a. ha L-1 de imazethapyr + 25 g i.a. ha L-1 de imazapic e outros três referentes à aplicação do herbicida clomazone. O tratamento mais eficiente no controle de arroz-vermelho foi a aplicação da mistura formulada de imazethapyr + imazapic em pré-emergência, seguido da mesma dose em pós-emergência. Este tratamento proporcionou 100% de controle de arroz-vermelho, além de não prejudicar o estande inicial de plantas e proporcionar alto rendimento de grãos do arroz irrigado.Red rice (Oryza spp. reduces rice (Oryza sativa L. grain yield and quality. A field study was conducted to compare two red rice control tools, the first using the Clearfield™ system and the second using high rates of clomazone and rice seeds treated with safener to suppress red rice emergence. The treatments included: check control without herbicide application, three treatments for the formulated herbicide mixture (imazethapyr 75 g i.a. L-1 + imazapic 25 g i.a. L-1 under the Clearfield system, and three clomazone treatments (clomazone 500 g i.a. L-1. The most efficient treatment for red rice control was the formulated mixture of imazethapyr + imazapic (0.7 L ha-1 PRE followed by 0.7 L ha-1 POST. This treatment promoted 100% red rice control, without affecting plant stand and promoting high grain yield.

  19. Resistência de biótipos de arroz-vermelho aos herbicidas imazapyr + imazapic e alternativas de controle

    Directory of Open Access Journals (Sweden)

    Rafael Salles Rubin

    2014-10-01

    Full Text Available O uso intenso de herbicidas com o mesmo mecanismo de ação na cultura do arroz (Oryza sativa L. tem selecionado biótipos resistentes, como, por exemplo, o arroz-vermelho (planta daninha resistente aos herbicidas imidazolinonas. Por essa razão, este trabalho foi desenvolvido com o objetivo de avaliar a resistência de arroz-vermelho ao herbicida imazapyr + imazapic, na região sul do Rio Grande do Sul, e o controle do biótipo resistente de arroz-vermelho com os herbicidas alternativos clethodim e glyphosate. Foram realizados três experimentos, em delineamento casualizado, arranjados em esquema fatorial. No primeiro experimento, o fator A testou biótipos de arroz-vermelho [ORYSA 184 (resistente e ORYSA 188 (susceptível], o fator B comparou herbicidas (imazapyr + imazapic, clethodim e glyphosate e o fator C avaliou doses dos herbicidas (0; 0,5; 1; 2; 4; 8; 16 e 32 vezes a dose recomendada. No segundo, compararam-se biótipos de arroz-vermelho e doses do herbicida imazapyr + imazapic (0; 0,5; 1; 2; 4; 8; 16; 32 e 64 vezes a dose recomendada. No terceiro, testaram-se biótipos de arroz-vermelho e doses diferentes do herbicida imazapyr + imazapic para cada biótipo. O biótipo ORYSA 184 é resistente ao imazapyr + imazapic, quando aplicada a dose máxima de registro e estádio indicado. Os herbicidas clethodim e glyphosate, detentores de mecanismos de ação alternativos, controlam o biótipo resistente ORYSA 184 de arroz-vermelho.

  20. Comparative mapping reveals similar linkage of functional genes to QTL of yield-related traits between Brassica napus and Oryza sativa

    Indian Academy of Sciences (India)

    Fupeng Li; Chaozhi Ma; Qingfang Chen; Touming Liu; Jinxiong Shen; Jinxing Tu; Yongzhong Xing; Tingdong Fu

    2012-08-01

    Oryza sativa and Brassica napus—two important crops for food and oil, respectively—share high seed yield as a common breeding goal. As a model plant, O. sativa genomics have been intensively investigated and its agronomic traits have been advanced. In the present study, we used the available information on O. sativa to conduct comparative mapping between O. sativa and B. napus, with the aim of advancing research on seed-yield and yield-related traits in B. napus. Firstly, functional markers (from 55 differentially expressed genes between a hybrid and its parents) were used to detect B. napus genes that co-localized with yield-related traits in an F2∶3 population. Referring to publicly available sequences of 55 B. napus genes, 53 homologous O. sativa genes were subsequently detected by screening, and their chromosomal locations were determined using silico mapping. Comparative location of yield-related QTL between the two species showed that a total of 37 O. sativa and B. napus homologues were located in similar yield-related QTL between species. Our results indicate that homologous genes between O. sativa and B. napus may have consistent function and control similar traits, which may be helpful for agronomic gene characterization in B. napus based on what is known in O. sativa.

  1. Simulação do manejo do nitrogênio em arroz de terras altas com o modelo ORYZA/APSIM 2000 Simulation of nitrogen management in upland rice with ORYZA/APSIM 2000 model

    Directory of Open Access Journals (Sweden)

    Luís F. Stone

    2012-06-01

    Full Text Available É importante definir a estratégia de manejo da adubação nitrogenada para o arroz de terras altas, pois o nitrogênio é o nutriente mais absorvido pelas plantas dessa cultura e, devido à facilidade de lixiviação no solo, pode poluir o meio ambiente. Objetivou-se, com este trabalho simular, com o modelo ORYZA/APSIM 2000, diferentes estratégias de manejo da adubação nitrogenada visando maximizar a produtividade e minimizar a lixiviação de N. Na simulação foi considerada a aplicação da dose de 100 kg ha-1 de N em cinco modos: TP - 1/5 na semeadura, 2/5 no início do perfilhamento (IP e 2/5 na diferenciação da panícula (DP; T1 - todo na semeadura; T2 - todo aos 20 dias antes da semeadura; T3 - 1/5 na semeadura e 4/5 no IP e T4 - 1/5 na semeadura e 4/5 na DP, os quais foram combinados com cinco datas de semeadura: 01/11, 15/11, 01/12, 15/12 e 31/12. O parcelamento da adubação nitrogenada mostrou-se como a estratégia com maior probabilidade de resultar em altas produtividades do arroz de terras altas. Quando não se utiliza essa estratégia, a probabilidade de perdas de nitrogênio por lixiviação é maior. Há maior probabilidade de se obter altas produtividades em datas de semeadura precoces a partir de 01/11, apesar da semeadura tardia contribuir para redução nas perdas de nitrogênio por lixiviação.It is important to define nitrogen management strategy for upland rice crop, because nitrogen is the nutrient more absorbed by rice plants and, due to the ease of leaching in soil, it can pollute the environment. This study aimed to simulate, based on ORYZA/APSIM 2000 model, different strategies for nitrogen fertilization management to maximize the productivity and minimize the N leaching. In the simulation, five application modes with an application rate of 100 kg N ha-1 were considered: TP - 1/5 at sowing, 2/5 at the beginning of tillering (T and 2/5 at panicle differentiation (P; T1 - all at sowing; T2 - all at 20 days

  2. Comparative Analysis of the Endosperm Proteins Separated by 2-D Electrophoresis for Two Cultivars of Hybrid Rice (Oryza sativa L.)

    Institute of Scientific and Technical Information of China (English)

    Pingfang Yang; Shihua Shen; Tingyun Kuang

    2006-01-01

    Liangyoupeijiu is a two-parental-line, and Shanyou63 is a three-parental-line hybrid rice (Oryza sativa L.).Although both belong to the indica subspecies, they have obvious differences with respect to morphology,physiology and grain quality. Variations in endosperm protein compositions were studied by comparing the 2-D electrophoresis (2-DE) maps for these two cultivars of hybrid rice. After matrix-assisted laser desorption/ionization time of flight mass spectrometry (MALDI-TOF/MS) analysis, a 21-kDa precursor of 19-kDa globulin was identified as the major storage protein for both cultivars. Some isoforms of peroxiredoxin and seed maturation protein were found to only exist in Shanyou63, whereas aldose reductase and starch granule-bound starch synthase were only detected in Liangyoupeijiu. These data might provide a foundation for further comparative studies of these two cultivars of hybrid rice.

  3. Molecular cloning, in vitro expression and enzyme activity analysis of violaxan-thin de-epoxidase from Oryza sativa L.

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    The violaxanthin de-epoxidase gene was cloned from rice (Oryza sativa subsp. japonica). The full length of the cDNA is 1887 bp, encoding a 446-amino acids protein with the transit peptide of 98 amino acids. The bacterial expression vector pET-Rvde was constructed and the expression quantity of the exogenous protein increased with the induction time by 0.4 mmol/L IPTG. Its molecular weight was similar with that of the native VDE. Western blotting indicated that the expressed protein has immunological reaction with the VDE polyclonal antibody. The absorbance spectrum together with xanthophyll pigments quantification by HPLC demonstrated that the expressed VDE has its enzyme activity, which can de-epoxidate violaxanthin into antheraxanthin and zeaxanthin in vitro.

  4. Extraction of anthocyanins and polyphenols from black rice (Oryza sativa L.) by modeling and assessing their reversibility and stability.

    Science.gov (United States)

    Pedro, Alessandra Cristina; Granato, Daniel; Rosso, Neiva Deliberali

    2016-01-15

    This study was aimed the extraction of total flavonoids, anthocyanins and phenolics, as well as the antioxidant activity of black rice (Oryza sativa) and to study the stability in relation to pH, light and copigmentation. Variations in temperature (10-50°C), time (20-80min), and solid-solvent ratio (1:15-1:45) were studied using a Box-Behnken design. The regression models were significant (Panthocyanins, 520.17mg 100g(-1) of phenolics and 46.50% inhibition of the DPPH radical. A decrease in the color intensity was observed when pH values were changed while anthocyanins were reversible in the process of protonation/deprotonation. The addition of glucose, phytic and gallic acids in the optimized extract exposed to light displayed an intermolecular copigmentation. The main anthocyanin identified in black rice was cyanidin-3-glucoside.

  5. OsPIN5b modulates rice (Oryza sativa) plant architecture and yield by changing auxin homeostasis, transport and distribution.

    Science.gov (United States)

    Lu, Guangwen; Coneva, Viktoriya; Casaretto, José A; Ying, Shan; Mahmood, Kashif; Liu, Fang; Nambara, Eiji; Bi, Yong-Mei; Rothstein, Steven J

    2015-09-01

    Plant architecture attributes such as tillering, plant height and panicle size are important agronomic traits that determine rice (Oryza sativa) productivity. Here, we report that altered auxin content, transport and distribution affect these traits, and hence rice yield. Overexpression of the auxin efflux carrier-like gene OsPIN5b causes pleiotropic effects, mainly reducing plant height, leaf and tiller number, shoot and root biomass, seed-setting rate, panicle length and yield parameters. Conversely, reduced expression of OsPIN5b results in higher tiller number, more vigorous root system, longer panicles and increased yield. We show that OsPIN5b is an endoplasmic reticulum (ER) -localized protein that participates in auxin homeostasis, transport and distribution in vivo. This work describes an example of an auxin-related gene where modulating its expression can simultaneously improve plant architecture and yield potential in rice, and reveals an important effect of hormonal signaling on these traits.

  6. Purification, crystallization and preliminary X-ray crystallographic analysis of rice Bowman–Birk inhibitor from Oryza sativa

    Energy Technology Data Exchange (ETDEWEB)

    Lin, Yi-Hung [Life Science Group, Research Division, National Synchrotron Radiation Research Center, Hsinchu 30076,Taiwan (China); Li, Hsin-Tai [Life Science Group, Research Division, National Synchrotron Radiation Research Center, Hsinchu 30076,Taiwan (China); Institute of Bioinformatics and Structural Biology, National Tsing-Hua University, Hsinchu 30013,Taiwan (China); Huang, Yen-Chieh [Life Science Group, Research Division, National Synchrotron Radiation Research Center, Hsinchu 30076,Taiwan (China); Hsieh, Ying-Cheng; Guan, Hong-Hsiang [Life Science Group, Research Division, National Synchrotron Radiation Research Center, Hsinchu 30076,Taiwan (China); Institute of Bioinformatics and Structural Biology, National Tsing-Hua University, Hsinchu 30013,Taiwan (China); Liu, Ming-Yih [Life Science Group, Research Division, National Synchrotron Radiation Research Center, Hsinchu 30076,Taiwan (China); Chang, Tschining; Wang, Andrew H.-J., E-mail: ahjwang@gate.sinica.edu.tw [Institute of Biological Chemistry, Academia Sinica, Taipei 11529,Taiwan (China); Chen, Chun-Jung, E-mail: ahjwang@gate.sinica.edu.tw [Life Science Group, Research Division, National Synchrotron Radiation Research Center, Hsinchu 30076,Taiwan (China); Department of Physics, National Tsing-Hua University, Hsinchu 30013,Taiwan (China)

    2006-06-01

    Rice Bowman–Birk inhibitor was expressed and crystallized. Bowman–Birk inhibitors (BBIs) are cysteine-rich proteins with inhibitory activity against proteases that are widely distributed in monocot and dicot species. The expression of rice BBI from Oryza sativa is up-regulated and induced by pathogens or insects during germination of rice seeds. The rice BBI (RBTI) of molecular weight 15 kDa has been crystallized using the hanging-drop vapour-diffusion method. According to the diffraction of rice BBI crystals at a resolution of 2.07 Å, the unit cell belongs to space group P2{sub 1}2{sub 1}2{sub 1}, with unit-cell parameters a = 74.37, b = 96.69, c = 100.36 Å. Preliminary analysis indicates four BBI molecules in an asymmetric unit, with a solvent content of 58.29%.

  7. Effect of gamma-irradiated sludge on the growth and yield of rice (Oryza sativa L. var. GR-3).

    Science.gov (United States)

    Pandya, G A; Prakash, L; Devasia, P; Modi, V V

    1988-01-01

    The effects of gamma-irradiated sludge on the growth and yield of rice (Oryza sativa L. var. GR-3) in pot cultures have been studied. Compared to plants grown only in soil, shoot length, root length, fresh weight, dry weight, total proteins, total soluble sugars, starch and chlorophyll content of plants grown in soil supplemented with unirradiated or gamma-irradiated sludge were found to be significantly increased. Irradiation of sludge significantly stimulated the linear growth of shoot and root systems as well as fresh and dry weights of plants, compared to those grown in soil containing unirradiated sludge. There was also an improvement in the grain yield (weight of seed) when plants were grown in soil supplemented with irradiated sludge. The results obtained suggest that the gamma-irradiated sewage sludge can be beneficially recycled for agricultural uses.

  8. Calibração e avaliação do modelo ORYZA-APSIM para o arroz de terras altas no Brasil Calibration and evaluation of the ORYZA-APSIM crop model for upland rice in Brazil

    Directory of Open Access Journals (Sweden)

    Rogério Lorençoni

    2010-12-01

    Full Text Available Objetivou-se com este trabalho calibrar o modelo ORYZA-APSIM e avaliar o seu desempenho na simulação do desenvolvimento, crescimento e produtividade da variedade cultivada de arroz de terras altas BRS-Primavera para as diferentes regiões produtoras dessa cultura. Na calibração foram definidas: as unidades de calor efetivo diário (HU; as taxas de desenvolvimento fenológico para cada estádio (DVR; as frações da massa de matéria seca das folhas (MSf, colmos (MS C e órgãos armazenadores (panículas (MSp, e os parâmetros para calcular a área foliar específica (AEF simulada durante o ciclo da cultura. Na avaliação foram comparados os valores simulados com os observados do desenvolvimento fenológico (número de dias da emergência ao florescimento e do crescimento da cultura (massa de matéria seca total da parte aérea (MSt índice de área foliar (IAF e a produtividade (P. O modelo apresentou desempenho satisfatório na simulação do desenvolvimento fenológico para regiões próximas ao da calibração. Para latitudes próximas ao equador, como Teresina, PI, o desempenho fenológico foi insatisfatório. Para o crescimento, nos dois experimentos, o índice de área foliar (IAF simulado diferiu do observado, e a MSt simulada foi semelhante a observada, mas diferiu entre o florescimento e a maturidade fisiológica. A MSf simulada foi satisfatória no primeiro experimento e regular no segundo. Isso é devido ao modelo superestimar os efeitos da deficiência hídrica que ocorreram durante a condução do segundo experimento. Entretanto, o modelo ORYZA-APSIM apresentou bom desempenho na simulação da ordem de produtividade ao nível de significância de 5%.This study was carried out with the purpose of calibranting the ORYZA-APSIM crop model and evaluating its performance to simulate the development, growth and yield of upland rice variety BRS-Primavera in the production area of upland rice in Brazil. Acording to the following

  9. Structure, allelic diversity and selection of Asr genes, candidate for drought tolerance, in Oryza sativa L. and wild relatives.

    Science.gov (United States)

    Philippe, Romain; Courtois, Brigitte; McNally, Kenneth L; Mournet, Pierre; El-Malki, Redouane; Le Paslier, Marie Christine; Fabre, Denis; Billot, Claire; Brunel, Dominique; Glaszmann, Jean-Christophe; This, Dominique

    2010-08-01

    Asr (ABA, stress, ripening) genes represent a small gene family potentially involved in drought tolerance in several plant species. To analyze their interest for rice breeding for water-limited environments, this gene family was characterized further. Genomic organization of the gene family reveals six members located on four different chromosomes and with the same exon-intron structure. The maintenance of six members of the Asr gene family, which are the result of combination between tandem duplication and whole genome duplication, and their differential regulation under water stress, involves probably some sub-functionalization. The polymorphism of four members was studied in a worldwide collection of 204 accessions of Oryza sativa L. and 14 accessions of wild relatives (O. rufipogon and O. nivara). The nucleotide diversity of the Asr genes was globally low, but contrasted for the different genes, leading to different shapes of haplotype networks. Statistical tests for neutrality were used and compared to their distribution in a set of 111 reference genes spread across the genome, derived from another published study. Asr3 diversity exhibited a pattern concordant with a balancing selection at the species level and with a directional selection in the tropical japonica sub-group. This study provides a thorough description of the organization of the Asr family, and the nucleotide and haplotype diversity of four Asr in Oryza sativa species. Asr3 stood out as the best potential candidate. The polymorphism detected here represents a first step towards an association study between genetic polymorphisms of this gene family and variation in drought tolerance traits.

  10. Target Identification in Ory S1 Pollen Protein Allergen from Oryza sativa in the Course of Construction of Hypoallergenic Vaccines

    Directory of Open Access Journals (Sweden)

    Ruchi Sharma

    2009-01-01

    Full Text Available Problem statement: Recombinant-based approaches are mostly focused on genetic modification of allergens to produce molecules with reduced allergenic activity and conserved antigenicity, such as hypoallergens. Recombinant allergens represent promising tools for diagnosis and therapy of type I allergy. This approach was probably feasible with every allergen with known amino acid sequence. Approach: The primary aim of this study was to determine the consensus epitope from twenty homologous protein sequences of Ory S1 allergenic protein sequence from Oryza sativa (indica group pollen. Molecular modeling calculations had been used to investigate the allergenic protein models for the epitope. Results: Oryza sativa (japonica, Phleum pratense, Poa pratensis, Holcus lanatus, Lolium perenne, Triticum aestivum, Dactylis glomerata and Zea mays were found more closely related (alignment score 1145-812 among all the homologs and investigated further. The major binding pocket comprised an area of 604.5 Å2 and 970 Å3 volume and another key binding pocket had 425.6 Ų area and 658.8 ų volume. The residues found in the key site included ile2, lys13, cys14, ser15, lys16, pro17, ala25, leu26, ile27, tyr40, his41, phe42, asp43, leu44, ser45, gly46, leu47, ala48, met49, ala50, asp55, leu58, arg59, ala61, gly62, ile63, ile64, asp65, gln67, phe68; corresponding to the allergen binding site and the IgE binding epitope given in the title. Conclusion: These are the functional sites on the allergenic proteins that can be mutated to develop hypoallergenic vaccine. These sites can be rationalized on the basis of simple arguments that lead to vaccine development, by predicting the structure of the allergenic epitopes and comparative analysis.

  11. The Effect of Green Synthesized CuO Nanoparticles on Callogenesis and Regeneration of Oryza sativa L.

    Science.gov (United States)

    Anwaar, Sadaf; Maqbool, Qaisar; Jabeen, Nyla; Nazar, Mudassar; Abbas, Fazal; Nawaz, Bushra; Hussain, Talib; Hussain, Syed Z.

    2016-01-01

    In this study, we have investigated the effect of copper oxide nanoparticles (CuO-NPs) on callogenesis and regeneration of Oryza sativa L (Super Basmati, Basmati 2000, Basmati 370, and Basmati 385). In this regard, CuO-NPs have been bio-synthesized via Azadirachta indica leaf extract. Scanning electron microscope (SEM) analysis depicts average particle size of 40 ± 5 nm with highly homogenous and spherical morphology. X-ray diffraction (XRD) and Fourier transform infrared spectroscopy (FTIR) have been employed to confirm the phase purity of the synthesized NPs. It is found that CuO-NPs exhibit very promising results against callus induction. It is attributed to the fact that green synthesized CuO-NPs at optimum dosage possess very supportive effects on plant growth parameters. In contrast to callogenesis, differential regeneration pattern has been observed against all of the examined O. sativa L. indigenous verities. Overall observation concludes that CuO, being one of the essential plant nutrients, has greatly tailored the nutritive properties at nano-scale. PMID:27630655

  12. Vigor hibrido y habilidad combinatoria en variedades comerciales y líneas de arroz (Oryza sativa L. de Colombia

    Directory of Open Access Journals (Sweden)

    Muñoz B. Dorance

    1986-09-01

    Full Text Available Entre las variedades Cica-4, Cica-7, Oryzica-1, Oryzica-2 y las líneas experimentales 17396 y 11744, se realizó un cruzamiento dialélico, sin sus recíprocos. El diseño empleado fue bloques al azar con cuatro repeticiones. Una planta por sitio se trasplantó a los 29 y 30 días en parcelas de tres metros de longitud y 90 centímetros de ancho, con un total de 60 plantas. La distancia desiembra fue de 30x20 cm. El mayor valor heterótico respecto al promedio y mejor parental en rendimiento se presentaron en el híbridoOryzica-2 x Cica- 4 (144.12 Y 139.42 %, el cual rindió 8_5 t/ha. La heterosis para rendimiento fue mayor que la de sus componentes. El índice de área foliar y número de granos por panícula contribuyeron positiva y significativamente en el rendimiento de los híbridos; mientras que tallos efectivos por planta es el contribuyente principal en el rendimiento de los padres. En la variación entre genotipos para rendimiento, eso y número de granos por panicula participaron efectos de HCE y para peso de 1000 granos y tallos efectivos participaron efectos de HCG. La heterosis en rendimiento, granos por panícula y peso de 1000 granos se asociaron con efectos de HCE.A diallel cross without their reciprocals was made between varieties Cica-4, Cica- 7, Oryzica-l, Oryzica-2 and the experimental lines 17396 and 11744. The experimental design was the randomized block with four replications. A plant per site was transplanted at the 29-30 days in 3 meters by 90 centimeters plots with a total of 60 plants. The planting distances were 30 cm x 20 cm. The higher heterotic value with respect to the mid-parent and the better parent for yield was shOlM1by the hybrid Oryzica- 2 x Cica-4 (144.12 % and 139.42 olo, which yielded 8_5 t/ha. The heterosis for yield was greater thouse of there components. Leaf index and number of grains per panicle contribute positive and significantly at the yield of the hybrids while effective tillers per plant were the main contribute at the parents yield. In the variation between genotypes for yield, weight and number of grains per panicle sea effects participated and for weight 1000 grains and effective tillers gca effects participated The heterosis for yield, grains per panicle and weight 1000 grains showea association with sea effects.

  13. Genetic diversity in Oryza glumaepatula wild rice populations in Costa Rica and possible gene flow from O. sativa

    Directory of Open Access Journals (Sweden)

    Eric J. Fuchs

    2016-04-01

    Full Text Available Wild crop relatives are an important source of genetic diversity for crop improvement. Diversity estimates are generally lacking for many wild crop relatives. The objective of the present study was to analyze how genetic diversity is distributed within and among populations of the wild rice species Oryza glumaepatula in Costa Rica. We also evaluated the likelihood of gene flow between wild and commercial rice species because the latter is commonly sympatric with wild rice populations. Introgression may change wild species by incorporating alleles from domesticated species, increasing the risk of losing original variation. Specimens from all known O. glumaepatula populations in Costa Rica were analyzed with 444 AFLP markers to characterize genetic diversity and structure. We also compared genetic diversity estimates between O. glumaepatula specimens and O. sativa commercial rice. Our results showed that O. glumaepatula populations in Costa Rica have moderately high levels of genetic diversity, comparable to those found in South American populations. Despite the restricted distribution of this species in Costa Rica, populations are fairly large, reducing the effects of drift on genetic diversity. We found a dismissible but significant structure (θ = 0.02 ± 0.001 among populations. A Bayesian structure analysis suggested that some individuals share a significant proportion of their genomes with O. sativa. These results suggest that gene flow from cultivated O. sativa populations may have occurred in the recent past. These results expose an important biohazard: recurrent hybridization may reduce the genetic diversity of this wild rice species. Introgression may transfer commercial traits into O. glumaepatula, which in turn could alter genetic diversity and increase the likelihood of local extinction. These results have important implications for in situ conservation strategies of the only wild populations of O. glumaepatula in Costa Rica.

  14. Genetic diversity in Oryza glumaepatula wild rice populations in Costa Rica and possible gene flow from O. sativa

    Science.gov (United States)

    Meneses Martínez, Allan; Calvo, Amanda; Muñoz, Melania

    2016-01-01

    Wild crop relatives are an important source of genetic diversity for crop improvement. Diversity estimates are generally lacking for many wild crop relatives. The objective of the present study was to analyze how genetic diversity is distributed within and among populations of the wild rice species Oryza glumaepatula in Costa Rica. We also evaluated the likelihood of gene flow between wild and commercial rice species because the latter is commonly sympatric with wild rice populations. Introgression may change wild species by incorporating alleles from domesticated species, increasing the risk of losing original variation. Specimens from all known O. glumaepatula populations in Costa Rica were analyzed with 444 AFLP markers to characterize genetic diversity and structure. We also compared genetic diversity estimates between O. glumaepatula specimens and O. sativa commercial rice. Our results showed that O. glumaepatula populations in Costa Rica have moderately high levels of genetic diversity, comparable to those found in South American populations. Despite the restricted distribution of this species in Costa Rica, populations are fairly large, reducing the effects of drift on genetic diversity. We found a dismissible but significant structure (θ = 0.02 ± 0.001) among populations. A Bayesian structure analysis suggested that some individuals share a significant proportion of their genomes with O. sativa. These results suggest that gene flow from cultivated O. sativa populations may have occurred in the recent past. These results expose an important biohazard: recurrent hybridization may reduce the genetic diversity of this wild rice species. Introgression may transfer commercial traits into O. glumaepatula, which in turn could alter genetic diversity and increase the likelihood of local extinction. These results have important implications for in situ conservation strategies of the only wild populations of O. glumaepatula in Costa Rica. PMID:27077002

  15. Polyamine oxidase 7 is a terminal catabolism-type enzyme in Oryza sativa and is specifically expressed in anthers.

    Science.gov (United States)

    Liu, Taibo; Kim, Dong Wook; Niitsu, Masaru; Maeda, Shunsuke; Watanabe, Masao; Kamio, Yoshiyuki; Berberich, Thomas; Kusano, Tomonobu

    2014-06-01

    Polyamine oxidase (PAO), which requires FAD as a cofactor, functions in polyamine catabolism. Plant PAOs are classified into two groups based on their reaction modes. The terminal catabolism (TC) reaction always produces 1,3-diaminopropane (DAP), H2O2, and the respective aldehydes, while the back-conversion (BC) reaction produces spermidine (Spd) from tetraamines, spermine (Spm) and thermospermine (T-Spm) and/or putrescine from Spd, along with 3-aminopropanal and H2O2. The Oryza sativa genome contains seven PAO-encoded genes termed OsPAO1-OsPAO7. To date, we have characterized four OsPAO genes. The products of these genes, i.e. OsPAO1, OsPAO3, OsPAO4 and OsPAO5, catalyze BC-type reactions. Whereas OsPAO1 remains in the cytoplasm, the other three PAOs localize to peroxisomes. Here, we examined OsPAO7 and its gene product. OsPAO7 shows high identity to maize ZmPAO1, the best characterized plant PAO having TC-type activity. OsPAO7 seems to remain in a peripheral layer of the plant cell with the aid of its predicted signal peptide and transmembrane domain. Recombinant OsPAO7 prefers Spm and Spd as substrates, and it produces DAP from both substrates in a time-dependent manner, indicating that OsPAO7 is the first TC-type enzyme identified in O. sativa. The results clearly show that two types of PAOs co-exist in O. sativa. Furthermore, OsPAO7 is specifically expressed in anthers, with an expressional peak at the bicellular pollen stage. The physiological function of OsPAO7 in anthers is discussed.

  16. OsMYB103L, an R2R3-MYB transcription factor, influences leaf rolling and mechanical strength in rice (Oryza sativa L.)

    OpenAIRE

    Yang, Chunhua; Li, Dayong; Liu, Xue; Ji, Chengjun; Hao, Lili; Zhao, Xianfeng; Li, Xiaobing; Chen, Caiyan; Cheng, Zhukuan; Zhu, Lihuang

    2014-01-01

    Background The shape of grass leaves possesses great value in both agronomy and developmental biology research. Leaf rolling is one of the important traits in rice (Oryza sativa L.) breeding. MYB transcription factors are one of the largest gene families and have important roles in plant development, metabolism and stress responses. However, little is known about their functions in rice. Results In this study, we report the functional characterization of a rice gene, OsMYB103L, which encodes ...

  17. Risk Assessment of Heavy Metals Contamination in Paddy Soil, Plants, and Grains (Oryza sativa L.) at the East Coast of India

    OpenAIRE

    Deepmala Satpathy; M. Vikram Reddy; Soumya Prakash Dhal

    2014-01-01

    Heavy metals known to be accumulated in plants adversely affect human health. This study aims to assess the effects of agrochemicals especially chemical fertilizers applied in paddy fields, which release potential toxic heavy metals into soil. Those heavy metals get accumulated in different parts of paddy plant (Oryza sativa L.) including the grains. Concentrations of nonessential toxic heavy metals (Cd, Cr, and Pb) and the micronutrients (Cu, Mn, and Zn) were measured in the paddy field soil...

  18. Identification of a RAPD marker linked to a blast resistance gene in Oryza sativa L.

    Institute of Scientific and Technical Information of China (English)

    LUJun; ZHUANGJieyun; LINHongxuan; ZHENGKangle

    1994-01-01

    Marker-aided selection has received more attention in recent years. This relies on the exploitation of close linkage between molecular markers and target gene(s). We report here a randomly amplified polymorphic DNA (RAID) marker tightly linked to the blast resistance gene Pi-11(t) derived from Hongjiaozhan, which confers the resistante to race ZBI of Pyricularia oryzae Car.

  19. Identification of Intergeneric Hybrid Plants Between Oryza sativa and O. minuta via GISH and RAPD

    Institute of Scientific and Technical Information of China (English)

    YU Shun-wu; CHEN Bao-tang; TAO Ai-lin; ZHANG Duan-pin

    2003-01-01

    To transfer desirable resistance traits from O. minuta to O. sativa, intergeneric hybrid plants between O. sativa (AA, 2n=2X=24) and O. minuta (BBCC, 2n=4X=48) were produced by embryo rescue after sexual cross. Morphological observation and chromosome counts indicated their hybrid status (ABC, 2n =3X=36). Genomic in situ hybridization (GISH) was further applied to confirm the parentage of the chromosomes of F1 hybrids. Chromosomes of O. minuta and O. sativa were distinguishable in the hybrids in different fluorescence colors. GISH indicated that A and BC chromosomes were not randomly assembled in a cell.RAPD profiles unequivocally revealed their hybrids with double parent patterns. The results of blast tests showed that the hybrids had obtained disease resistance from O. minuta, and had a level of susceptibility between the parents.

  20. Comunidad de cianobacterias durante el ciclo de cultivo de arroz: Oriza sativa L. Cyanobacteria during a rice (Oriza sativa L. crop cycle

    Directory of Open Access Journals (Sweden)

    Cecilia Isabel Sánchez

    2007-07-01

    Full Text Available El desarrollo de las cianobacterias en el cultivo de arroz se ve afectado por diferentes factores abióticos entre ellos la temperatura. El objetivo de nuestro trabajo fue analizar la evolución de la comunidad de cianobacterias durante el ciclo del cultivo de arroz en sitios con diferentes temperaturas del agua de inundación. El cultivo fue regado con agua subterránea. Se compararon dos ubicaciones respecto de la entrada del agua al lote. En macollaje, a los tres días desde la inundación, los recuentos de cianobacterias totales fueron similares en los dos sitios, pero difirieron en los muestreos de panoja embuchada y madurez fisiológica. Los géneros encontrados durante todo el ciclo fueron: Chroococcus, Aphanocapsa y Gloeocapsa (unicelulares, Oscillatoria, Lyngbya y Arthrospira (filamentosas no heterocísticas, Anabaena, Nostoc,Cylindrospermunm y Gloeotrichia (filamentosas heterocísticas. Las cianobacterias filamentosas heterocísticas no superaron el 45% y, en la mayoría de los muestreos, osciló alrededor del 25%. En la zona de mayor temperatura, la proporción de cianobacterias unicelulares fue mayor, y menor la de filamentosas no heterocísticas, la cual fue menor al 2% durante todo el ciclo. Los valores de diversidad de Simpson fueron mayores en la zona de mayor temperatura en cada uno de los momentos de muestreo. Los géneros dominantes fueron unicelulares (Chroococcus y Gloeocapsa en cinco de los seis muestreos. En ambos sitios, el género Chroococcus siempre estuvo presente. Gloeocapsa y Nostoc aparecieron a partir de panoja embuchada y los géneros Cylindrospermum y Gloeotrichia en madurez fisiológica.Abiotic factors as temperature affect cyanobacterial growth in rice crop fields. The aim of our study was to evaluate cyanobacteria during rice crop development in two crop areas with different water temperature. We worked in a rice crop flooded with subterraneous water. We sampled two sites that differed in the distance from the

  1. 保试达防除水稻田杂草稻研究%Study on Glufosinate-amonium in Controlling Oryza sativa f. spontanea in Rice Field

    Institute of Scientific and Technical Information of China (English)

    高玉珠; 罗彩莲; 卓晓光; 刘华伟; 邓德海; 翁强; 李国君

    2014-01-01

    Objective The aim was to explore the efficacy and safety of glu-fosinate-ammonium in controlling Oryza sativa f. spontanea in rice field, for pro-viding efficient and safe solution for controlling Oryza sativa f. spontanea. [Method] The research which taking the glufosinate-ammonium as the based phar-maceutical for controlling Oryza sativa f.spontanea was carried out, by se-lecting the middle paddy in which Oryza sativa f. spontanea serious outbroke at perennial as the testing ground, and single-use of glufosinate-ammonium and mix of glufosinate-ammonium and oxadi-azon. [Result] The results showed that glufosinate-ammonium and oxadia-zon had better effects for controlling O-ryza sativa f.spontanea and the main weeds in seeded rice. Supporting use treatment with potassium nitrate, glufosinate-am-monium and oxadiazon had final safety of yield. [Conclusion] The results provid-ed a reference for the rice production.%[目的]明确保试达防除稻田杂草稻的效果及安全性,为稻田杂草稻防除提供高效、安全的解决方案。[方法]开展以保试达为基础药剂对杂草稻防除效果的研究,通过选择常年杂草稻发生严重的中产稻田为试验地和保试达单用、与农思它混用等方法进行试验。[结果]保试达和农思它对杂草稻和直播稻田的主要杂草都有较好的防治效果。硝酸钾、保试达和农思它配套使用处理对产量有最终安全性。[结论]研究结果为水稻生产提供了参考。

  2. Hybrid Weakness Found in the Backcross Progeny of an Inter-Specific Cross of Oryza Sativa / O. Glumaepatula

    Directory of Open Access Journals (Sweden)

    Sobrizal

    2009-01-01

    Full Text Available Hybrid breakdown expressed as sterility or weakness or both in F2 or later generations is considered to be a reproductive barrier between two distantly related taxa. Hybrid breakdown that showed poor growth habit with fertile seeds was found in the backcross progenies (BC4F2 which were derived from a cross between a cultivated rice Oryza sativa L. cv. Taichung 65 and a wild rice Oryza glumaepatula Steud (Acc. IRGC 105668 where Taichung 65 was used as a recurrent parent. Through segregation analysis of BC4F2 population, a novel gene for weakness was identified, and this gene was designated as hwf1 (hybrid weakness f-1. RFLP (Restriction Fragment Length Polymorphism analysis was employed to determine the chromosomal location of hwf1 gene. The result revealed that hwf1 was located between G3006 and C933 RFLP markers, with map distances of 0.5 cM and 1.9 cM, respectively, and co-segregated with C708, C820, and R288 on the short arm of chromosome 4. Since both O. glumaepatula (Acc. IRGC 105668 and Taichung 65 that was used as parents showed normal growth habit, the weakness in this study was assumed to be controlled by a set of complementary recessive genes. One of the complementary genes is hwf1 from O. glumaepatula, and another gene should be from Taichung 65, because the genetic background of the BC4F2 populations that were used for analysis is Taichung 65. The gene from Taichung 65 has not been identified yet, therefore, it is necessary to conduct the experiment for finding out the complement of hwf1 gene in near future.

  3. Comparative Analysis of Genomes in Oryza sativa, O.officinalis, and O. meyeriana with C0t-1 DNA and Genomic DNA of Cultivated Rice

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    Fluorescence in situ hybridization (FISH) and comparative genomic hybridization (CGH) were applied to somatic chromosomes preparations of Oryza sativa, O. officinalis, and O. meyeriana with labeled probes of C0t-1 DNA and genomic DNA from the cultivated rice. The coverage percentage (%) and size (Mb) of C0t-1 DNA in O. sativa, O. officinalis, and O. meyeriana were 47.1 ±0.16, 38.61 ±0.13, 44.38±0.13, and 212.33± 1.21,269.42 ± 0.89, 532.56± 1.68 Mb, respectively. The coverage percentage and size of genomic DNA from O. sativa in O. officinalis and O. meyeriana were 91.0, 93.6% and 634, 1 123 Mb, respectively, in which 365 and 591 Mb in O. officinalis and O. meyeriana were from O. sativa genomic DNA, but not from repetitive sequences of O. sativa, and the uncoverage genome size in O. officinalis and O. meyeriana were 64 and 78 Mb, respectively. In addition, karyotype analysis was conducted based on the signal bands of C0t-1 DNA in O. sativa, O. officinalis, and O. meyeriana. The results showed that highly and moderately repetitive sequences in Oryza genus were conserved as the functional genes during evolution. The repetitive sequences reduplication may be one of the important causes of the genome enlargement of O. officinalis and O. meyeriana, and O. officinalis genome enlarged more slowly when compared with O. meyeriana. Based on the above results, it is concluded that O. officinalis and O. meyeriana were formed by reduplication, rearrangement, and gene selective loss during the evolution process.

  4. Development of Oryza rufipogon and O. sativa Introgression Lines and Assessment for Yield-related Quantitative Trait Loci

    Institute of Scientific and Technical Information of China (English)

    Lubin Tan; Fengxia Liu; Wei Xue; Guijuan Wang; Sheng Ye; Zuofeng Zhu; Yongcai Fu; Xiangkun Wang; Chuanqing Sun

    2007-01-01

    Introgression lines population was effectively used in mapping quantitative trait loci (QTLs), identifying favorable genes, discovering hidden genetic variation, evaluating the action or interaction of QTLs in multiple conditions and providing the favorable experimental materials for plant breeding and genetic research. In this study, an advanced backcross and consecutive selfing strategy was used to develop introgression lines (ILs), which derived from an accession of Oryza rufipogon Griff, collected from Yuanjiang County, Yunnan Province of China, as the donor, and an elite indica cultivar Teqing (O. sativa L.), as the recipient. Introgression segments from O. rufipogon were screened using 179 polymorphic simple sequence repeats (SSR) markers in the genome of each IL. Introgressed segments carried by the introgression lines population contained 120 ILs covering the whole O. rufipogon genome. The mean number of homozygous O. rufipogon segments per introgression line was about 3.88. The average length of introgressed segments was approximate 25.5 cM, and about 20.8% of these segments had sizes less than 10 cM. The genome of each IL harbored the chromosomal fragments of O. rufipogon ranging from 0.54% to 23.7%, with an overall average of 5.79%. At each locus, the ratio of substitution of O. rufipogon alleles had a range of 1.67-9.33, with an average of 5.50. A wide range of alterations in morphological and yield-related traits were also found in the introgression lines population. Using single-point analysis, a total of 37 putative QTLs for yield and yield components were detected at two sites with 7%-20% explaining the phenotypic variance. Nineteen QTLs (51.4%) were detected at both sites, and the alleles from O. rufipogon at fifteen loci (40.5%) improved the yield and yield components in the Teqing background. These O. rufipogon-O. sativa introgression lines will serve as genetic materials for identifying and using favorable genes from common wild rice.

  5. Computational Identification of Novel Family Members of MicroRNA Genes in Arabidopsis thaliana and Oryza sativa

    Institute of Scientific and Technical Information of China (English)

    Yang LI; Wei LI; You-Xin JIN

    2005-01-01

    MicroRNAs (miRNAs) are a class of endogenous small RNAs that play important regulatory roles in both animals and plants, miRNA genes have been intensively studied in animals, but not in plants. In this study, we adopted a homology search approach to identify homologs of previously validated plant miRNAs in Arabidopsis thaliana and Oryza sativa. We identified 20 potential miRNA genes in Arabidopsis and 40 in O. sativa, providing a relatively complete enumeration of family members for these miRNAs in plants. In addition, a greater number ofArabidopsis miRNAs (MIR168, MIR159 and MIR172) were found to be conserved in rice. With the novel homologs, most of the miRNAs have closely related fellow miRNAs and the number of paralogs varies in the different miRNA families. Moreover, a probable functional segment highly conserved on the elongated stem of pre-miRNA fold-backs of MIR319 and MIR 159 family was identified. These results support a model of variegated miRNA regulation in plants, in which miRNAs with different functional elements on their pre-miRNA fold-backs can differ in their function or regulation, and closely related miRNAs can be diverse in their specificity or competence to downregulate target genes. It appears that the sophisticated regulation of miRNAs can achieve complex biological effects through qualitative and quantitative modulation of gene expression profiles in plants.

  6. Comparative Embryological Studies on Infertility of Interspecific Hybridizations Between Oryza sativa with Different Ploidy Levels and O.officinalis

    Institute of Scientific and Technical Information of China (English)

    FU Xue-lin; LU Yong-gen; LIU Xiang-dong; LI Jin-quan; ZHAO Xing-juan

    2009-01-01

    As maternal parents, diploid (L202-2x) and autotetraploid (L202-4x) of Oryza sativa cv. L202 were crossed with O. officinalis. Embryo development and fertilization in these two crosses were comparatively studied. There were no mature hybrid seeds obtained because all the hybridized spikelets died 30 days after pollination. The main reasons for no seed set were abnormal fertilization and development of the embryos and endosperms in the interspecific hybrids. There were double- fertilization, egg cell single-fertilization and non-fertilization in these crosses. Although 59.45% and 54.87% of hybrid embryos produced in the crosses of L202-2x/O. officinalis and L202-4x/O. officinalis, respectively, hybrid embryos ceased to develop or degenerated and plenty of free endosperm nuclei were in disaggregating state without developing cellular endosperms three days after pollination. Besides, some embryological differences in these two crosses were found, that is, the rate of double-fertilization and total rate of double- and single-fertilization in L202-2x/O. officinalis were higher than those in L202-4x/O. officinalis. The embryo and endosperm of hybrids developed more slowly, and embryos and free endosperm nuclei were more severely degenerated in L202-4x/O. officinalis than in L202-2x/O. officinalis. Five days after pollination, a few of embryos in L202-2x/O. officinalis developed into pear-shaped ones, however, embryos in L202-4x/O. officinalis were all degenerated. Therefore, it is more difficult to obtain interspecific hybrids by wide crosses between autotetraploid of O. sativa and O. officinalis.

  7. Duplication and diversification of the LEAFY HULL STERILE1 and Oryza sativa MADS5 SEPALLATA lineages in graminoid Poales

    Directory of Open Access Journals (Sweden)

    Christensen Ashley R

    2012-02-01

    Full Text Available Abstract Background Gene duplication and the subsequent divergence in function of the resulting paralogs via subfunctionalization and/or neofunctionalization is hypothesized to have played a major role in the evolution of plant form. The LEAFY HULL STERILE1 (LHS1 SEPALLATA (SEP genes have been linked with the origin and diversification of the grass spikelet, but it is uncertain 1 when the duplication event that produced the LHS1 clade and its paralogous lineage Oryza sativa MADS5 (OSM5 occurred, and 2 how changes in gene structure and/or expression might have contributed to subfunctionalization and/or neofunctionalization in the two lineages. Methods Phylogenetic relationships among 84 SEP genes were estimated using Bayesian methods. RNA expression patterns were inferred using in situ hybridization. The patterns of protein sequence and RNA expression evolution were reconstructed using maximum parsimony (MP and maximum likelihood (ML methods, respectively. Results Phylogenetic analyses mapped the LHS1/OSM5 duplication event to the base of the grass family. MP character reconstructions estimated a change from cytosine to thymine in the first codon position of the first amino acid after the Zea mays MADS3 (ZMM3 domain converted a glutamine to a stop codon in the OSM5 ancestor following the LHS1/OSM5 duplication event. RNA expression analyses of OSM5 co-orthologs in Avena sativa, Chasmanthium latifolium, Hordeum vulgare, Pennisetum glaucum, and Sorghum bicolor followed by ML reconstructions of these data and previously published analyses estimated a complex pattern of gain and loss of LHS1 and OSM5 expression in different floral organs and different flowers within the spikelet or inflorescence. Conclusions Previous authors have reported that rice OSM5 and LHS1 proteins have different interaction partners indicating that the truncation of OSM5 following the LHS1/OSM5 duplication event has resulted in both partitioned and potentially novel gene

  8. Uptake of selected PAHs from contaminated soils by rice seedlings (Oryza sativa) and influence of rhizosphere on PAH distribution

    Energy Technology Data Exchange (ETDEWEB)

    Su Yuhong [Chemistry Department, Xinjiang University, Urumqi 830046 (China); Zhu Yongguan [Research Center for Eco-environmental Sciences, Chinese Academy of Sciences, 18 Shuangqing Road, Beijing 100085 (China)], E-mail: ygzhu@rcees.ac.cn

    2008-09-15

    The uptake of selected polycyclic aromatic hydrocarbons (PAHs) by rice (Oryza sativa) seedlings from spiked aged soils was investigated. When applied to soils aged for 4 months, naphthalene, phenanthrene, and pyrene exhibited volatilization loss of 98, 95, and 30%, respectively, with the remaining fraction being fixed by soil organic matter and/or degraded by soil microbes. In general, concentrations of the three PAHs in rice roots were greater than those in the shoots. The concentrations of root associated PHN and PYR increased proportionally with both soil solution and rhizosphere concentrations. PAH concentrations in shoots were largely independent of those in soil solution, rice roots, or rhizosphere soil. The relative contributions of plant uptake and plant-promoted rhizosphere microbial biodegradation to the total mass balance were 0.24 and 14%, respectively, based on PYR concentrations in rhizosphere and non-rhizosphere soils, the biomass of rice roots, and the dry soil weight. - Contributions of plant uptake and rhizosphere effect on removal of PAHs from soils are relatively insignificant.

  9. Chloroplast downsizing under nitrate nutrition restrained mesophyll conductance and photosynthesis in rice (Oryza sativa L.) under drought conditions.

    Science.gov (United States)

    Li, Yong; Ren, Binbin; Yang, Xiuxia; Xu, Guohua; Shen, Qirong; Guo, Shiwei

    2012-05-01

    The phenomenon whereby ammonium enhances the tolerance of rice seedlings (Oryza sativa L., cv. 'Shanyou 63' hybrid indica China) to water stress has been reported in previous studies. To study the intrinsic mechanism of biomass synthesis related to photosynthesis, hydroponic experiments supplying different nitrogen (N) forms were conducted; water stress was simulated by the addition of polyethylene glycol. Water stress decreased leaf water potential (Ψ(leaf)) under nitrate nutrition, while it had no negative effect under ammonium nutrition. The decreased Ψ(leaf) under nitrate nutrition resulted in chloroplast downsizing and subsequently decreased mesophyll conductance to CO(2) (g(m)). The decreased g(m) and stomatal conductance (g(s)) under nitrate nutrition with water stress restrained the CO(2) supply to the chloroplast and Rubisco. The relatively higher distribution of leaf N to Rubisco under ammonium nutrition might also be of benefit for photosynthesis under water stress. In conclusion, chloroplast downsizing induced a decline in g(m), a relatively higher decrease in g(s) under nitrate nutrition with water stress, restrained the CO(2) supply to Rubisco and finally decreased the photosynthetic rate.

  10. Determination of some minerals and β-carotene contents in aromatic indica rice (Oryza sativa L.) germplasm.

    Science.gov (United States)

    Renuka, N; Mathure, Sarika V; Zanan, Rahul L; Thengane, Ratnakar J; Nadaf, Altafhusain B

    2016-01-15

    39 aromatic indica rice (Oryza sativa L.) cultivars were characterized for Iron, Zinc, Calcium, Magnesium, Copper and β-carotene contents. The β-carotene contents were ranging from 1.23 to 9.9μg/g in brown and 0.08 to 1.99μg/g in milled rice. Among the mineral contents, Magnesium was found ranging from 855μg/g (Gham) to maximum of 1636μg/g (Badshahbhog) followed by Iron in 32μg/g (Jirga) to 218μg/g (Kalsal), Copper content from 2μg/g (Girga) to 1004μg/g (Gham), Zinc content from 25 (Gham) to 165μg/g (Ambemohar-157) and Calcium ranged from 14μg/g (Ambemohar pandhara) to 67μg/g (Kate chinoor). The study showed that the germplasm assessed is a good source of micronutrients and can be further exploited in breeding programme.

  11. Functional characterization of a transition metal ion transporter, OsZIP6 from rice (Oryza sativa L.).

    Science.gov (United States)

    P G, Kavitha; Kuruvilla, Sam; Mathew, M K

    2015-12-01

    Micronutrients are important for the growth and development of plants, which deploy families of transporters for their uptake and distribution. We have functionally characterized a novel transition metal ion transporter from rice, OsZIP6 (Oryza sativa zinc regulated transporter, iron regulated transporter-like protein 6). The transporter was found to be transcriptionally activated in shoot and root tissues in response to deficiency in Fe(2+), Zn(2+) and Mn(2+). OsZIP6 was expressed in Xenopus laevis oocytes, where currents were observed on addition of Co(2+), Fe(2+) and Cd(2+) but not Zn(2+), Mn(2+) and Ni(2+). This substrate range for OsZIP6, identified using two-electrode voltage clamp electrophysiology was confirmed by atomic absorption spectroscopy. Ion transport by OsZIP6 was found to be pH dependent and enhanced transport was observed at acidic pH. Radioisotope uptake suggested that Co(2+) competitively inhibits Fe(2+) uptake by OsZIP6. Identification and characterization of ZIP family members from crop plants will contribute to an understanding of nutrient mineral homeostasis in these plants.

  12. Analysis of Male Sterility-Related Proteins of Young Panicle in Rice (Oryza sativa L.) by Two-Dimensional Electrophoresis

    Institute of Scientific and Technical Information of China (English)

    HU Yao-jun; WEI Lei; LIU Shu-nan; YU Jin-hong; DING Yi

    2005-01-01

    For searching out male sterility-related proteins (polypeptides) in rice (Oryza sativa L.), we examined the difference of panicle protein (polypeptides) between hybrid rice (Wujin2A/R168, Wujin5A/R988) and their parents (male-sterile line Wujin2A, Wujin5A, and restorer line R168, R988) at the formation stage of pollen mother cell by two-dimensional electrophoresis (2-DE). The results revealed that the 2-DE polypeptide maps were similar among these experimental materials. A small group of polypeptides were disappeared in 2-DE polypeptide maps of male-sterile line (Wujin2A, Wujin5A) by comparing to restorer line (R168, R988) and the first filial (F1) generation (Wujin2A/R168, Wujin5A/R988). The isoelectric points of these polypeptides were pI 5.8-6.5, molecular weight 42.7×103-66.2×103.

  13. In Vitro Callus Induction and Regeneration Potentiality of Aromatic Rice (Oryza sativa L. Cultivars in Differential Growth Regulators

    Directory of Open Access Journals (Sweden)

    Zahida Yesmin Roly

    2014-06-01

    Full Text Available Aromatic rice (Oryza sativa L. cultivars are strong aromatic rice cultivars which can thrive well in rice fields prone to flood, drought and other soil constraints. The present investigation was undertaken to determine a suitable media compositions for callus induction and regeneration using immature embryo of six aromatic grown rice cultivars of Bangladesh, namely, Chinigura, Kalijira, Radhuni Pagal, Modhumala, Kataribog and Mohonbhog. For callus induction different concentrations and combinations of 2, 4-Dichlorophenoxyaceticacid (2, 4-D along with NAA were evaluated. Maximum callus induction (97.22% was observed in Kalijira when 2 mg/L of 2, 4-D and 0.5 mg/l NAA was used and less Modhumala (66.67% and remaining cultivars showed moderate. For regeneration initially different concentrations and combinations of 6-BenzylAminoPurine (BAP and Indole-3-Acetic Acid (IBA were tested. Maximum regeneration frequency (91.67% was observed Kalijira when the optimum concentrations and combinations of 0.5 mg/l of BAP + 0.1 of mg/l IBA were used. Presently optimized regeneration method holds promise for facilitating the deployment of agronomical important trait through genetic transformation for the improvement of this important food crops.

  14. Oxalate Accumulation as Regulated by Nitrogen Forms and Its Relationship to Photosynthesis in Rice (Oryza sativa L.)

    Institute of Scientific and Technical Information of China (English)

    Xiu-Mei JI; Xin-Xiang PENG

    2005-01-01

    Four-leaf rice seedlings (Oryza sativa L.), which had been cultivated in Kimura B complete nutrient solution, were treated with two nitrogen forms by replacing the nitrogen element in the complete solution with sole nitrate or ammonium (2.86 mmol/L). Nitrate-N nutrition tended to increase oxalate content in all parts of the plant, including the leaves, stems, roots, and root exudates, whereas ammonium had the opposite effect. Consequently, marked differences in oxalate content were observed between the two treatments throughout the time tested (0--12 d), with maximal differences of approximately 12-fold at 6 d after treatment. Photosynthetic/respiratory parameters were examined over time simultaneously with changes in oxalate content. Net photosynthetic rate, chlorophyll fluorescence parameters (i.e. maximal photochemical efficiency (Fv/Fm) and photochemical quantum yields of photosystem (PS)Ⅱ (φ PSⅡ)), and respiratory rate were not significantly different between plants treated with the two nitrogen forms, although ammonium-fed plants had apparently higher leaf chlorophyll content than nitrate-fed plants. Leaf glucose content was altered little, but the content of fructose, sucrose, and total soluble sugar was significantly higher in the leaves of ammonium-fed plants than nitrate-fed plants, The results indicate that nitrate/ammonium may serve as efficient regulators of oxalate accumulation owing to regulation of metabolism in rice leaves rather than oxalate downward transfer and root excretion, and that photosynthetic metabolism is not directly correlated with the regulation of oxalate accumulation in rice plants.

  15. Genetic diversity of rice cultivars (Oryza sativa L.) in China and the temporal trends in recent fifty years

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    To understand geographical distribution of the genetic diversity of rice cultivars (Oryza sativa L.) and its trends in recent fifty years in China, 453 accessions were analyzed by 36 microsatellites loci and 42 phenotypic traits. Results revealed that the genetic diversity by SSRs is highly consistent with that by phenotypic traits and the genetic diversity of indica cultivars was higher than that of japonica cultivars; the genetic diversity of cultivars declined from 1950s to 1980s and then increased greatly; among the six rice ecological zones (REZs), genetic diversity of REZⅡ was the highest and those of REZⅤ and REZⅥ were the lowest at both DNA and phenotypic level. Jiangsu and Jiangxi provinces in the middle and lower reaches of Yangtze River and Sichuan province in southwest of China were the areas with the highest genetic diversity. Breeders in REZⅤ which is an important japonica rice area but with very low genetic diversity should explore more gene resources to widen the genetic backgrounds of cultivars.

  16. Structural understanding of the recycling of oxidized ascorbate by dehydroascorbate reductase (OsDHAR) from Oryza sativa L. japonica.

    Science.gov (United States)

    Do, Hackwon; Kim, Il-Sup; Jeon, Byoung Wook; Lee, Chang Woo; Park, Ae Kyung; Wi, Ah Ram; Shin, Seung Chul; Park, Hyun; Kim, Young-Saeng; Yoon, Ho-Sung; Kim, Han-Woo; Lee, Jun Hyuck

    2016-01-18

    Dehydroascorbate reductase (DHAR) is a key enzyme involved in the recycling of ascorbate, which catalyses the glutathione (GSH)-dependent reduction of oxidized ascorbate (dehydroascorbate, DHA). As a result, DHAR regenerates a pool of reduced ascorbate and detoxifies reactive oxygen species (ROS). In previous experiments involving transgenic rice, we observed that overexpression of DHAR enhanced grain yield and biomass. Since the structure of DHAR is not available, the enzymatic mechanism is not well-understood and remains poorly characterized. To elucidate the molecular basis of DHAR catalysis, we determined the crystal structures of DHAR from Oryza sativa L. japonica (OsDHAR) in the native, ascorbate-bound, and GSH-bound forms and refined their resolutions to 1.9, 1.7, and 1.7 Å, respectively. These complex structures provide the first information regarding the location of the ascorbate and GSH binding sites and their interacting residues. The location of the ascorbate-binding site overlaps with the GSH-binding site, suggesting a ping-pong kinetic mechanism for electron transfer at the common Cys20 active site. Our structural information and mutagenesis data provide useful insights into the reaction mechanism of OsDHAR against ROS-induced oxidative stress in rice.

  17. Oryza sativa H+-ATPase (OSA) is Involved in the Regulation of Dumbbell-Shaped Guard Cells of Rice.

    Science.gov (United States)

    Toda, Yosuke; Wang, Yin; Takahashi, Akira; Kawai, Yuya; Tada, Yasuomi; Yamaji, Naoki; Feng Ma, Jian; Ashikari, Motoyuki; Kinoshita, Toshinori

    2016-06-01

    The stomatal apparatus consists of a pair of guard cells and regulates gas exchange between the leaf and atmosphere. In guard cells, blue light (BL) activates H(+)-ATPase in the plasma membrane through the phosphorylation of its penultimate threonine, mediating stomatal opening. Although this regulation is thought to be widely adopted among kidney-shaped guard cells in dicots, the molecular basis underlying that of dumbbell-shaped guard cells in monocots remains unclear. Here, we show that H(+)-ATPases are involved in the regulation of dumbbell-shaped guard cells. Stomatal opening of rice was promoted by the H(+)-ATPase activator fusicoccin and by BL, and the latter was suppressed by the H(+)-ATPase inhibitor vanadate. Using H(+)-ATPase antibodies, we showed the presence of phosphoregulation of the penultimate threonine in Oryza sativa H(+)-ATPases (OSAs) and localization of OSAs in the plasma membrane of guard cells. Interestingly, we identified one H(+)-ATPase isoform, OSA7, that is preferentially expressed among the OSA genes in guard cells, and found that loss of function of OSA7 resulted in partial insensitivity to BL. We conclude that H(+)-ATPase is involved in BL-induced stomatal opening of dumbbell-shaped guard cells in monocotyledon species.

  18. Alteration of leaf metabolism in Bt-transgenic rice (Oryza sativa L.) and its wild type under insecticide stress.

    Science.gov (United States)

    Zhou, Jia; Zhang, Lei; Chang, Yuwei; Lu, Xin; Zhu, Zhen; Xu, Guowang

    2012-08-03

    Insecticide is always used to control the damage from pests, while the potential influence on plants is rarely known. Time-course metabolic changes of wild and Bacillus thuringiensis (Bt) transgenic rice (Oryza sativa L.) plants after insecticide treatment were investigated by using gas chromatography-mass spectrometry (GC-MS). A combined statistical strategy of 2-way ANOVA and multivariate analyses (principal component analysis and hierarchal cluster analysis) was performed to find the stress-associated effects. The results reveal that a wide range of metabolites were dynamically varied in both varieties as a response to insecticide, in multiple metabolic pathways, such as biosynthesis and metabolism of amino acids, carbohydrates, fatty acids, TCA cycle, and the shikimate/phenylpropanoid pathway, and most of the changes were correlated with the exposure time and dependent on the variety. A set of stress defenses were activated, including phytohormone signaling pathway, antioxidant defense system, shikimate-mediated secondary metabolism, and so on. In particular, insecticide led to much stronger regulations of signaling molecules (salicylate and the precursor of jasmonate) and antioxidants (α-tocopherol and dehydroascorbate/ascorbate) in Bt-transgenic variety at the early stage. Our results demonstrated that the Bt-transgenic rice had a more acute and drastic response to insecticide stress than its non-transgenic counterpart in antioxidant system and signaling regulation.

  19. The promoting effects of alginate oligosaccharides on root development in Oryza sativa L. mediated by auxin signaling.

    Science.gov (United States)

    Zhang, Yunhong; Yin, Heng; Zhao, Xiaoming; Wang, Wenxia; Du, Yuguang; He, Ailing; Sun, Kegang

    2014-11-26

    Alginate oligosaccharides (AOS), which are marine oligosaccharides, are involved in regulating plant root growth, but the promotion mechanism for AOS remains unclear. Here, AOS (10-80 mg/L) induced the expression of auxin-related gene (OsYUCCA1, OsYUCCA5, OsIAA11 and OsPIN1) in rice (Oryza sativa L.) tissues to accelerate auxin biosynthesis and transport, and reduced indole-3-acetic acid (IAA) oxidase activity in rice roots. These changes resulted in the increase of 37.8% in IAA concentration in rice roots, thereby inducing the expression of root development-related genes, promoting root growth in a dose-dependent manner, which were inhibited by auxin transport inhibitor 2,3,5-triiodo benzoic acid (TIBA) and calcium-chelating agent ethylene glycol bis (2-aminoethyl) tetraacetic acid (EGTA). AOS also induced calcium signaling generation in rice roots. Those results indicated that auxin mediated AOS regulation of root development, and calcium signaling may act mainly in the upstream of auxin in the regulation of AOS on rice root development.

  20. Identification of a candidate gene for panicle length in rice (Oryza sativa L. via association and linkage analysis

    Directory of Open Access Journals (Sweden)

    Erbao eLiu

    2016-05-01

    Full Text Available Panicle length (PL is an important trait for improving panicle architecture and grain yield in rice (Oryza sativa L.. Three populations were used to identify QTLs and candidate genes associated with PL. Four QTLs for PL were detected on chromosomes 4, 6 and 9 through linkage mapping in the recombinant inbred line population derived from a cross between the cultivars Xiushui79 (short panicle and C-bao (long panicle. Ten SSR markers associated with PL were detected on chromosomes 2, 3, 5, 6, 8, 9 and 10 in the natural population consisting of 540 accessions collected from East and Southeast Asia. A major locus on chromosome 9 with the largest effect was identified via both linkage and association mapping. LONG PANICLE 1 (LP1 locus was delimited to a 90-kb region of the long arm of chromosome 9 through fine mapping using a single segment segregating F2 population. Two single nucleotide polymorphisms (SNPs leading to amino acid changes were detected in the third and fifth exons of LP1. LP1encodes a Remorin_C-containing protein of unknown function with homologs in a variety of species. Sequencing analysis of LP1 in two parents and 103 rice accessions indicated that SNP1 is associated with panicle length. The LP1 allele of Xiushui79 leads to reduced panicle length, whereas the allele of C-bao relieves the suppression of panicle length. LP1 and the elite alleles can be used to improve panicle length in rice.

  1. Silicon alleviates simulated acid rain stress of Oryza sativa L. seedlings by adjusting physiology activity and mineral nutrients.

    Science.gov (United States)

    Ju, Shuming; Wang, Liping; Yin, Ningning; Li, Dan; Wang, Yukun; Zhang, Cuiying

    2017-03-16

    Silicon (Si) has been a modulator in plants under abiotic stresses, such as acid rain. To understand how silicon made an effect on rice (Oryza sativa L.) exposed to simulated acid rain (SAR) stress, the growth, physiologic activity, and mineral nutrient content in leaves of rice were investigated. The results showed that combined treatments with Si (1.0, 2.0, or 4.0 mM) and SAR (pH 4.0, 3.0, or 2.0) obviously improved the rice growth compared with the single treatment with SAR. Incorporation of Si into SAR treatment decreased malondialdehyde (MDA) content; increased soluble protein and proline contents; promoted CAT, POD, SOD, and APX activity; and maintained the K, Ca, Mg, Fe, Zn, Cu content balance in leaves of rice seedlings under SAR stress. The moderate concentration of Si (2.0 mM) was better than the low and high concentration of Si (1.0 and 4.0 mM). Therefore, application of Si could be a better strategy for maintaining the crop productivity in acid rain regions.

  2. Global analysis of lysine acetylation suggests the involvement of protein acetylation in diverse biological processes in rice (Oryza sativa.

    Directory of Open Access Journals (Sweden)

    Babi Ramesh Reddy Nallamilli

    Full Text Available Lysine acetylation is a reversible, dynamic protein modification regulated by lysine acetyltransferases and deacetylases. Recent advances in high-throughput proteomics have greatly contributed to the success of global analysis of lysine acetylation. A large number of proteins of diverse biological functions have been shown to be acetylated in several reports in human cells, E.coli, and dicot plants. However, the extent of lysine acetylation in non-histone proteins remains largely unknown in monocots, particularly in the cereal crops. Here we report the mass spectrometric examination of lysine acetylation in rice (Oryza sativa. We identified 60 lysine acetylated sites on 44 proteins of diverse biological functions. Immunoblot studies further validated the presence of a large number of acetylated non-histone proteins. Examination of the amino acid composition revealed substantial amino acid bias around the acetylation sites and the amino acid preference is conserved among different organisms. Gene ontology analysis demonstrates that lysine acetylation occurs in diverse cytoplasmic, chloroplast and mitochondrial proteins in addition to the histone modifications. Our results suggest that lysine acetylation might constitute a regulatory mechanism for many proteins, including both histones and non-histone proteins of diverse biological functions.

  3. Combined Mass Spectrometry-Based Metabolite Profiling of Different Pigmented Rice (Oryza sativa L. Seeds and Correlation with Antioxidant Activities

    Directory of Open Access Journals (Sweden)

    Ga Ryun Kim

    2014-09-01

    Full Text Available Nine varieties of pigmented rice (Oryza sativa L. seeds that were black, red, or white were used to perform metabolite profiling by using ultra-performance liquid chromatography-quadrupole-time-of-flight mass spectrometry (UPLC-Q-TOF-MS and gas chromatography (GC TOF-MS, to measure antioxidant activities. Clear grouping patterns determined by the color of the rice seeds were identified in principle component analysis (PCA derived from UPLC-Q-TOF-MS. Cyanidin-3-glucoside, peonidin-3-glucoside, proanthocyanidin dimer, proanthocyanidin trimer, apigenin-6-C-glugosyl-8-C-arabiboside, tricin-O-rhamnoside-O-hexoside, and lipids were identified as significantly different secondary metabolites. In PCA score plots derived from GC-TOF-MS, Jakwangdo (JKD and Ilpoom (IP species were discriminated from the other rice seeds by PC1 and PC2. Valine, phenylalanine, adenosine, pyruvate, nicotinic acid, succinic acid, maleic acid, malonic acid, gluconic acid, xylose, fructose, glucose, maltose, and myo-inositol were significantly different primary metabolites in JKD species, while GABA, asparagine, xylitol, and sucrose were significantly distributed in IP species. Analysis of antioxidant activities revealed that black and red rice seeds had higher activity than white rice seeds. Cyanidin-3-glucoside, peonidin-3-glucoside, proanthocyanidin dimers, proanthocyanidin trimers, and catechin were highly correlated with antioxidant activities, and were more plentiful in black and red rice seeds. These results are expected to provide valuable information that could help improve and develop rice-breeding techniques.

  4. Association mapping and genetic dissection of nitrogen use efficiency-related traits in rice (Oryza sativa L.).

    Science.gov (United States)

    Liu, Zhiyi; Zhu, Chengsong; Jiang, Yue; Tian, Yunlu; Yu, Jun; An, Hongzhou; Tang, Weijie; Sun, Juan; Tang, Jianpeng; Chen, Gaoming; Zhai, Huqu; Wang, Chunming; Wan, Jianmin

    2016-05-01

    The increases in the usage of nitrogen fertilizer result in deleterious impacts on the environment; thus, there is an urgent need to improve nitrogen use efficiency (NUE) in crops including rice (Oryza sativa L.). Attentions have focused on quantitative trait loci (QTL) mapping of NUE-related traits using single experimental population, but to date, very few studies have taken advantage of association mapping to examine hundreds of lines for identifying potentially novel QTLs in rice. Here, we conducted association analysis on NUE-related traits using a population containing 184 varieties, which were genotyped with 157 genome-wide simple sequence repeat (SSR) markers. We detected eight statistically significant marker loci associating with NUE-related traits, of which two QTLs at RM5639 and RM3628 harbored known NUE-related genes GS1;2 and AspAt3, respectively. At a novel NUE-related locus RM5748, we developed Kompetitive Allele Specific PCR (KASP) single nucleotide polymorphism (SNP) markers and searched for putative NUE-related genes which are close to the associated SNP marker. Based on a transcriptional map of N stress responses constructed by our lab, we evaluated expressions of the NUE-related genes in this region and validated their effect on NUE. Meanwhile, we analyzed NUE-related alleles of the eight loci that could be utilized in marker-assisted selection. Moreover, we estimated breeding values of all the varieties through genomic prediction approach that could be beneficial for rice NUE enhancement.

  5. Comparison of physiological responses to oxidative and .heavymetal stress in seedlings of rice paddy, Oryza sativa L.

    Institute of Scientific and Technical Information of China (English)

    2000-01-01

    Physiological responses on the bases of activities of antioxidant enzymes: peroxidase, catalase, superoxide dismutase and glutathione reductase as well as estimation of total protein, lipid peroxidation and thiols in the form of iprotein, non-protein, glutathione and phytochelatin measured in growing seedlings of paddy, Oryza sativa L. , from day 2 to 8 were compared following treatment of seeds for 5h with oxidative agents, paraquat 5 × 10-5, 10-4, 10-3 mol/L, H2O2 10-3, 5 × 10-3, 10-2 mol/L, and CdCl2 10- 5, 10- 4, 5 × 10- 3 mol/L. A significant induction of all antioxidant enzymes along with an increase in the levels of protein, lipid peroxidation and glutathione was noted in response to oxidative stress, C dCl2 induced significant peroxidase and catalase activities but not superoxide dismutase. In a marked contrast from oxidative stress, CdCl2 decreased glutathione reductase activity as well as glutathione levels but increased phytochelatin level. The different physiological responses thus underlined the crucial involvement of glutathione and phytochelatin in the oxidative and heavy metal-linduced adaptive responses respectively.

  6. Influence of Mn and Fe Counteraction on Rice (Oryza Sativa L.) Oranging Physiological Disease

    Institute of Scientific and Technical Information of China (English)

    LIAOZHONG-WEN; LINDONG-JIAO; 等

    1994-01-01

    Mn and Fe are two important micronutrients of paddy soils derived from red earths.Rice(Oryza sativa L.)oranging physiological diease in newly reclaimed red rarths is related to Fe toxicity.There have been considerable studies on Mn and Fe counteraction,but influence of Mn and Fe counteration on rice oranging physiological disease still remains unknown.This paper is to study,using two soils from USA and China respectively,the relationship between Nn and Fe counteraction and the physiological disease.Analysis for water soluble and extractable Fe and Mn showed that Mn/Fe ratios of the red earths were lower than those of the paddy soils.Fertilizing with Mn raised Mn/Fe and reduced oranging leaves,improved growth and increased yields.Analysis with electron probe showed that Mn treatment had less Fe deposit in root epidermis and more Ca and Si in roots.The results indicated that fertilizing with Mn could correct Fe toxicity.How to apply Mn and Fe counteraction in practice is worth further studying.

  7. Genomewide survey and characterization of metacaspase gene family in rice (Oryza sativa)

    Indian Academy of Sciences (India)

    Likai Wang; Hua Zhang

    2014-04-01

    Metacaspases (MCs), which are cysteine-dependent proteases found in plants, fungi, and protozoa, may be involved in programmed cell death processes, being distant relatives of metazoan caspases. In this study, we analysed the structures, phylogenetic relationship, genome localizations, expression patterns and domestic selections of eight MC genes identified in rice (OsMC). Alignment analysis of the corresponding protein sequences suggested OsMC proteins can be classified into two sub-types. The expression profiles of eight OsMC genes were analysed in 27 tissues covering the whole life cycle of rice. There are four OsMC genes uniquely expressed in mature tissues, indicating that these genes might play certain roles in senescence. Under abiotic and biotic stresses, four OsMC genes were expressed with treatments of one or more of Magnaporthe oryzae (M. oryzae) infected, pest damaged, cold stress and drought stress, indicating they might be involved in plant defense. In addition, gene trees and genetic diversity $(\\pi)$ were performed to measure whether candidate genes were selected during rice domestication. The results suggested that all the type I genes could not be domestication genes. However, two of five type II OsMC genes showed strong evidence for selective sweep, suggesting that these genes might be involved in cultivated rice domestication. These results provide a foundation for future functional genomic studies of this family in rice.

  8. Impacto do manejo da água na toxidez por ferro no arroz irrigado por alagamento

    Directory of Open Access Journals (Sweden)

    Fabiana Schmidt

    2013-10-01

    Full Text Available A toxidez por ferro é o distúrbio nutricional de maior ocorrência em arroz (Oryza sativa L. cultivado em sistemas alagados, derivada da quantidade excessiva de íons ferrosos (Fe2+ gerados pela redução de óxidos de ferro em solos alagados. Em experimento conduzido em casa de vegetação, foram avaliados os efeitos de manejos da água de irrigação na dinâmica de redução de um Planossolo e na manifestação da toxidez por ferro em arroz. Os tratamentos dispostos em blocos completos ao acaso com quatro repetições constaram de cinco manejos da água: T1- início do alagamento no estádio V2-V3 do arroz; T2- início do alagamento no estádio V6-V7; T3- T1 e drenagem no estádio V10-V11; T4- T2 e drenagem no estádio V10-V11; e T5- T1 e drenagens nos estádios V7-V8 e V10-V11. O atraso do início do alagamento para o estádio V6-V7 do arroz manteve os valores do Eh da solução do solo mais elevados, promovendo menor disponibilidade de Fe2+ na solução do solo e deslocando a máxima liberação de Fe2+ na solução do solo para estádios fenológicos mais avançados do arroz. A realização de drenagens ao longo do ciclo vegetativo do arroz promoveu a reoxidação do solo, que ocasionou o aumento dos valores de Eh e redução da concentração de Fe2+ na solução do solo. O uso de drenagens durante o período vegetativo do arroz foi eficiente no controle da toxidez por excesso de ferro, em arroz cultivado em solo alagado.

  9. Population structure analysis and association mapping of blast resistance in indica rice (Oryza sativa L.) landraces.

    Science.gov (United States)

    Wu, Y Y; He, J B; Li, A H; Fang, N Y; He, W W; Dang, L L; Zeng, G Y; Huang, J; Bao, Y M; Zhang, H S

    2016-08-12

    Rice blast caused by Magnaporthe oryzae is one of the most devastating rice diseases worldwide. To understand the genetic diversity of indica landrace accessions and identify simple sequence repeat (SSR) markers that are associated with blast resistance, a population of 276 indica landraces from across the world was constructed. This population was then used to evaluate the blast-resistance phenotype through artificial inoculation under controlled conditions in 2012 and 2013. The genetic diversity and association of the population with resistance were analyzed by examining the phenotype for 160 SSR markers distributed on 12 rice chromosomes. The 276 accessions were classified into seven groups using model- and distance-based cluster analyses. Associations between SSR markers and blast resistance showed that 26 SSR markers were significantly associated with blast resistance in 2012 and 2013 (P rice blast-resistance-breeding programs.

  10. Optimal Estimation of Phenological Crop Model Parameters for Rice (Oryza sativa)

    Science.gov (United States)

    Sharifi, H.; Hijmans, R. J.; Espe, M.; Hill, J. E.; Linquist, B.

    2015-12-01

    Crop phenology models are important components of crop growth models. In the case of phenology models, generally only a few parameters are calibrated and default cardinal temperatures are used which can lead to a temperature-dependent systematic phenology prediction error. Our objective was to evaluate different optimization approaches in the Oryza2000 and CERES-Rice phenology sub-models to assess the importance of optimizing cardinal temperatures on model performance and systematic error. We used two optimization approaches: the typical single-stage (planting to heading) and three-stage model optimization (for planting to panicle initiation (PI), PI to heading (HD), and HD to physiological maturity (MT)) to simultaneously optimize all model parameters. Data for this study was collected over three years and six locations on seven California rice cultivars. A temperature-dependent systematic error was found for all cultivars and stages, however it was generally small (systematic error changes in cardinal temperature relative to the default values and thus optimization of cardinal temperatures did not affect systematic error or model performance. Compared to single stage optimization, three-stage optimization had little effect on determining time to PI or HD but significantly improved the precision in determining the time from HD to MT: the RMSE reduced from an average of 6 to 3.3 in Oryza2000 and from 6.6 to 3.8 in CERES-Rice. With regards to systematic error, we found a trade-off between RMSE and systematic error when optimization objective set to minimize RMSE or systematic error. Therefore, it is important to find the limits within which the trade-offs between RMSE and systematic error are acceptable, especially in climate change studies where this can prevent erroneous conclusions.

  11. Viabilidade da antecipação do tratamento de sementes de arroz com inseticidas em relação à data de semeadura no controle de Oryzophagus oryzae (Coleoptera: Curculionidae Viability of the advance rice seed treatment with insecticides in relation to sowing date in the control of Oryzophagus oryzae (Coleoptera: Curculionidae

    Directory of Open Access Journals (Sweden)

    Anderson Dionei Grützmacher

    2008-10-01

    Full Text Available Oryzophagus oryzae (Costa Lima, 1936 é uma das pragas mais prejudiciais da cultura do arroz irrigado, sendo seu controle efetuado tradicionalmente com inseticidas granulados aplicados na água de irrigação. No entanto, o uso de inseticidas aplicados às sementes tem sido considerado promissor. Embora existam máquinas adequadas para aplicação de inseticidas às sementes, há dificuldade de assegurar a qualidade das sementes tratadas, em poucos dias ou mesmo horas antes da semeadura. Assim, objetivou-se avaliar a viabilidade do tratamento de sementes de arroz com inseticidas aplicados com antecedência à data de semeadura para o controle de O. oryzae. Dois experimentos foram instalados na Estação Experimental de Terras Baixas da Embrapa Clima Temperado, localizada no município de Capão do Leão, Rio Grande do Sul (RS, em duas épocas (1997/1998 e 2004/2005. O delineamento experimental foi em blocos ao acaso com quatro repetições. Foram avaliados os inseticidas carbosulfano e fipronil aplicados manualmente às sementes de arroz em diferentes épocas que antecederam a semeadura e foram avaliadas as variáveis poder germinativo e vigor das sementes, plantas emergidas, população larval e produtividade de grãos. O tratamento das sementes de arroz com inseticidas, antecipadamente à data de semeadura, visando ao controle de O. oryzae, demonstrou ser viável. Os inseticidas carbosulfano e fipronil são adequados ao tratamento antecipado das sementes, se aplicados até 75 dias antes da semeadura.Oryzophagus oryzae (Costa Lima, 1936 is one of the most important pests of irrigated rice, whose control is made traditionally with granulated insecticides on the irrigation water. However, the use of insecticides on the seeds has been considered a promising method. Although there are adequate implements to apply insecticides on the seeds, it’s hard to make this treatment with quality and in a big quantity, few days or hours before sowing. In

  12. Effect of gamma-radiation and sodium azide on quantitative characters in rice (Oryza sativa L.

    Directory of Open Access Journals (Sweden)

    Ricardo Montalván

    1998-03-01

    Full Text Available Seeds of rice cultivar IAC-1246 received single and combined treatments of 10 or 20 Krad gamma-rays and 0.5 mM sodium azide (SA. The experiments were carried out to assess the effect of treatments on the mean and variance in second generation plants of the following quantitative traits: number of days to flowering (NDF, culm length (CL and tiller number (TN. In general, the mutagenic treatments increased variance, but did not change the mean for the characters NDF and CL in the M2 generation. There was no increase in the mean or variance of TN. The combined treatments of gamma-rays and SA resulted in larger variance in CL than for the treatments with gamma-rays alone, but not higher than obtained with SA alone. Combined treatments with gamma-rays and SA did not increase the variance of NDF and TN when compared with the corresponding single treatments.Sementes do cultivar de arroz IAC-1246 receberam tratamento individual e combinado de 10 e 20 Krad de raios-gama e 0,5 de azida sódica (SA. O experimento foi realizado para avaliar o efeito dos tratamentos sobre a média e a variância de plantas M2 nos seguintes caracteres quantitativos: número de dias para a maturação (NDF, comprimento de colmo (CL e número de perfílhos (TN. Em geral, os tratamentos mutagênicos incrementaram a variância, sem mudar a média para os caracteres NDF e CL na geração M2. Todavia, não foi encontrado nenhum incremento seja para a média ou para a variância no caráter TN. Para o caráter CL, os tratamentos combinados de raios-gama e SA mostraram maior variância que aquela observada no tratamento individual com raios-gama, não sendo superior que aquela correspondente ao tratamento individual com SA. Para os caracteres NDF e TN, os tratamentos combinados de raios-gama e SA não incrementaram a variância, quando comparados aos correspondentes tratamentos individuais.

  13. Seed Germination Behaviors Of Some Aerobic Rice Cultivars Oryza Sativa L After Priming With Polyethylene Glycol-8000 Peg-8000

    Directory of Open Access Journals (Sweden)

    Elkheir H.A

    2015-08-01

    Full Text Available Seed Priming Is Famous Technique To Accelerate Seed Germination Behaviors. This Experiment Was Conducted To Study The Effect Of Polyethylene Glycol-8000 Peg-8000 As Priming Agent On Seed Germination Behavior Of Some Aerobic Rice Cultivars Oryza Sativa L. Experiment Was Carried Out By Using Two-Factor Three Aerobic Rice Cultivars And Peg With Four Replications Which Arranged In Factorial System Design And Conducted With Completely Randomized Design. The Factor Was Varieties Which Were Inpago 8 V1 Ir64 V2 And Situbagendit V3 Combine With 4 Levels Of Peg Concentrations 0100 And 200 Gl-1 And Control With No Treatment. Experiment Was Repeated 4 Times So Total Number Of Experimental Units Were 48. Germination Parameters Measured Were Germination Percentage Germination Index Days Of 50 Germination Seedling Fresh Weight Mg Seedling Shoot Fresh Weight And Root Fresh Weight Mg Seedling Dry Weigh Mg Seedling Shoot Dry Weight And Root Dry Weight Mg ShootRoot Ratio Seedling Length Cm Seedling Root Length Cm And Shoot Length Cm And Seed Vigor Index. The Results Indicated That Seed Priming Significantly Affected Germination Behaviors Compared With Control Depending Upon Varieties. The Highest Germination Was Obtained Under Laboratory And Greenhouse Condition By The Treatment Of Peg 200 G L-1 On The Situbagendit And Ir-64 Variety 90.25 And 93.33 Respectively Compared To Control In Inpago-8 In Both Laboratory 75.75 And Greenhouse 80 . As Implementation To Increase Seed And Seedling Vigor Of Rice It Is A Best Practice To Use Peg Priming With 200 Gl-1 Solutions Depend Upon Varietal Response And We Suggest That More Research About The Effect Of Peg As Seed Priming Techniques On Seed Germination Behavior Of Many Grain Crops Is Needed To Confirm The Methodology.

  14. Transgenerational inheritance of modified DNA methylation patterns and enhanced tolerance induced by heavy metal stress in rice (Oryza sativa L..

    Directory of Open Access Journals (Sweden)

    Xiufang Ou

    Full Text Available BACKGROUND: DNA methylation is sensitive and responsive to stressful environmental conditions. Nonetheless, the extent to which condition-induced somatic methylation modifications can impose transgenerational effects remains to be fully understood. Even less is known about the biological relevance of the induced epigenetic changes for potentially altered well-being of the organismal progenies regarding adaptation to the specific condition their progenitors experienced. METHODOLOGY/PRINCIPAL FINDINGS: We analyzed DNA methylation pattern by gel-blotting at genomic loci representing transposable elements and protein-coding genes in leaf-tissue of heavy metal-treated rice (Oryza sativa plants (S0, and its three successive organismal generations. We assessed expression of putative genes involved in establishing and/or maintaining DNA methylation patterns by reverse transcription (RT-PCR. We measured growth of the stressed plants and their unstressed progenies vs. the control plants. We found (1 relative to control, DNA methylation patterns were modified in leaf-tissue of the immediately treated plants, and the modifications were exclusively confined to CHG hypomethylation; (2 the CHG-demethylated states were heritable via both maternal and paternal germline, albeit often accompanying further hypomethylation; (3 altered expression of genes encoding for DNA methyltransferases, DNA glycosylase and SWI/SNF chromatin remodeling factor (DDM1 were induced by the stress; (4 progenies of the stressed plants exhibited enhanced tolerance to the same stress their progenitor experienced, and this transgenerational inheritance of the effect of condition accompanying heritability of modified methylation patterns. CONCLUSIONS/SIGNIFICANCE: Our findings suggest that stressful environmental condition can produce transgenerational epigenetic modifications. Progenies of stressed plants may develop enhanced adaptability to the condition, and this acquired trait is

  15. Selenium ameliorates arsenic induced oxidative stress through modulation of antioxidant enzymes and thiols in rice (Oryza sativa L.).

    Science.gov (United States)

    Kumar, Amit; Singh, Rana Pratap; Singh, Pradyumna Kumar; Awasthi, Surabhi; Chakrabarty, Debasis; Trivedi, Prabodh Kumar; Tripathi, Rudra Deo

    2014-09-01

    Arsenic (As) contamination of rice is a major problem for South-East Asia. In the present study, the effect of selenium (Se) on rice (Oryza sativa L.) plants exposed to As was studied in hydroponic culture. Arsenic accumulation, plant growth, thiolic ligands and antioxidative enzyme activities were assayed after single (As and Se) and simultaneous supplementations (As + Se). The results indicated that the presence of Se (25 µM) decreased As accumulation by threefold in roots and twofold in shoots as compared to single As (25 µM) exposed plants. Arsenic induced oxidative stress in roots and shoots was significantly ameliorated by Se supplementation. The observed positive response was found associated with the increased activities of ascorbate peroxidase (APX; EC 1.11.1.11), catalase (CAT; EC 1.11.1.6) and glutathione peroxidase (GPx; EC 1.11.1.9) and induced levels of non-protein thiols (NPTs), glutathione (GSH) and phytochelatins (PCs) in As + Se exposed plants as compared to single As treatment. Selenium supplementation modulated the thiol metabolism enzymes viz., γ-glutamylcysteine synthetase (γ-ECS; EC 6.3.2.2), glutathione-S-transferase (GST; EC 2.5.1.18) and phytochelatin synthase (PCS; EC 2.3.2.15). Gene expression analysis of several metalloid responsive genes (LOX, SOD and MATE) showed upregulation during As stress, however, significant downregulation during As + Se exposure as compared to single As treatment. Gene expressions of enzymes of antioxidant and GSH and PC biosynthetic systems, such as APX, CAT, GPx, γ-ECS and PCS were found to be significantly positively correlated with their enzyme activities. The findings suggested that Se supplementation could be an effective strategy to reduce As accumulation and toxicity in rice plants.

  16. Salicylic acid modulates arsenic toxicity by reducing its root to shoot translocation in rice (Oryza sativa L.

    Directory of Open Access Journals (Sweden)

    Amit Pal Singh

    2015-05-01

    Full Text Available Arsenic (As is posing serious health concerns in South East Asia where rice, an efficient accumulator of As, is prominent crop. Salicylic acid (SA is an important signalling molecule and plays a crucial role in resistance against biotic and abiotic stress in plants. In present study, ameliorative effect of SA against arsenate (AsV toxicity has been investigated in rice (Oryza sativa L.. Arsenate stress hampered the plant growth in terms of root, shoots length and biomass as well as it enhanced the level of H2O2 and MDA in dose dependent manner in shoot. Exogenous application of SA, reverted the growth and oxidative stress caused byAsV and significantly decreased As translocation to the shoots. Level of As in shoot was positively correlated with the expression of OsLsi2, efflux transporter responsible for root to shoot translocation of arsenic in the form of arsenite (AsIII. Salicylic acid also overcame AsV induced oxidative stress and modulated the activities of antioxidant enzymes in a differential manner in shoots. Arsenic treatment hampered the translocation of Fe in the shoot which was compensated by the SA treatment. The level of Fe in root and shoot was positively correlated with the transcript level of transporters responsible for the accumulation of Fe,OsNRAMP5 and OsFRDL1, in the root and shoot respectively. Co-application of SA was more effective than pre-treatment for reducing As accumulation as well as imposed toxicity.

  17. Association Mapping for Drought Tolerance of Rice (Oryza sativa L.) at Vegetative Stage

    Institute of Scientific and Technical Information of China (English)

    Yulong XIAO; Chuanyuan YU; Jianguo LEI; Quirino D; DELA CRUZ; Jonalyn M.YABES; Dindo A.TABANAo

    2012-01-01

    [Objective] This study aimed to identify possible quantitative trait loci (QTL) for vegetative drought tolerance traits of rice (Oryza sativa L.). [Method] A total of 184 rice genotypes were field screened and 156 SSR markers randomly distributed at each 3 Mb bin were used through genome-wide scanning method and association analysis to detect QTLs for vegetative drought tolerance traits leaf rolling (LER), leaf drying (LED) and drought recovery rate (DRR). [Result] The experimental rice geno- types showed varied response under vegetative drought, LER, LED and DRR were highly correlated. Population structure was detected at K=3 and K=7, certain extent of admixture existed in the experimental rice genotypes, relative kinship of the rice genotypes ranged from 0 to 0.924 5. Significant linkage disequilibrium among SSR markers was detected. Sixteen SSR markers have been detected to be associated with vegetative drought tolerance traits, four for LER, eight for LED and four for DDR. Most of the markers were associated with more than one trait, indicating a single mechanism might involve in expression of several related traits, i.e. osmotic adjustment. RM107 (Chr.9) was associated with all the three traits and fell exactly within or closely nearby to previous reported regions, was a major QTL for vegeta- tive drought tolerance, RM477 (Chr.8) was significantly associated with DRR and ex- tremely significantly associated with LER was probably another major QTL for vege- tative drought tolerance. [Conclusion] Association mapping is a very effective method for describing complex traits like drought tolerance.

  18. Root aquaporins contribute to whole plant water fluxes under drought stress in rice (Oryza sativa L.).

    Science.gov (United States)

    Grondin, Alexandre; Mauleon, Ramil; Vadez, Vincent; Henry, Amelia

    2016-02-01

    Aquaporin activity and root anatomy may affect root hydraulic properties under drought stress. To better understand the function of aquaporins in rice root water fluxes under drought, we studied the root hydraulic conductivity (Lpr) and root sap exudation rate (Sr) in the presence or absence of an aquaporin inhibitor (azide) under well-watered conditions and following drought stress in six diverse rice varieties. Varieties varied in Lpr and Sr under both conditions. The contribution of aquaporins to Lpr was generally high (up to 79% under well-watered conditions and 85% under drought stress) and differentially regulated under drought. Aquaporin contribution to Sr increased in most varieties after drought, suggesting a crucial role for aquaporins in osmotic water fluxes during drought and recovery. Furthermore, root plasma membrane aquaporin (PIP) expression and root anatomical properties were correlated with hydraulic traits. Three chromosome regions highly correlated with hydraulic traits of the OryzaSNP panel were identified, but did not co-locate with known aquaporins. These results therefore highlight the importance of aquaporins in the rice root radial water pathway, but emphasize the complex range of additional mechanisms related to root water fluxes and drought response.

  19. Identification of rice (Oryza sativa L.) signal factors capable of inducing Agrobacterium vir gene expression

    Institute of Scientific and Technical Information of China (English)

    许东晖; 李宝健; 刘煜; 黄志纾; 古练权

    1996-01-01

    Two kinds of signal factors capable of inducing Agrobaorerium vir gene expression were purified and identified from leaf extracts of panicle-differentiating to flowering stage of rice (Oryza saliva L. cv. IR 72) detected by Agrobacterium vir(?) lacZ. fusion genes. The induction was similar to that observed with 5 μm actosyringone (AS). Based on the comprehensive analysis of the data by UV, IR, NMR, MS, HMQC and HMBC, the structures of these two signal factors are identified as 5, 7, 4’-trihydroxy-3’, 5’-dimethoxy-flavone (named tricin) and 5, 4’ -dihydroxy-3’, 5’ -dimethoxy-7- (β-D-glucosyloxy) -flavone, respectively. These results demonstrate that monocotyledonous plants do contain highly efficient vir gene inducing factors of Agrobacterium, and the reason why monocotyledonous plants are difficult to transform by Ayrobacterium is not due to absence of vir gene inducing factors, but due to the signal factors only produced in specific stage and tissue of monocotyledonous plants

  20. Gene interactions and genetics of blast resistance and yield attributes in rice (Oryza sativa L.)

    Indian Academy of Sciences (India)

    B. Divya; A. Biswas; S. Robin; R. Rabindran; A. John Joel

    2014-08-01

    Blast disease caused by the pathogen Pyricularia oryzae is a serious threat to rice production. Six generations viz., P1, P2, F1, F2, B1 and B2 of a cross between blast susceptible high-yielding rice cultivar ADT 43 and resistant near isogenic line (NIL) CT13432-3R, carrying four blast resistance genes Pi1, Pi2, Pi33 and Pi54 in combination were used to study the nature and magnitude of gene action for disease resistance and yield attributes. The epistatic interaction model was found adequate to explain the gene action in most of the traits. The interaction was complementary for number of productive tillers, economic yield, lesion number, infected leaf area and potential disease incidence but duplicate epistasis was observed for the remaining traits. Among the genotypes tested under epiphytotic conditions, gene pyramided lines were highly resistant to blast compared to individuals with single genes indicating that the nonallelic genes have a complementary effect when present together. The information on genetics of various contributing traits of resistance will further aid plant breeders in choosing appropriate breeding strategy for blast resistance and yield enhancement in rice.

  1. Assessing hybrid sterility in Oryza glaberrima x O. sativa hybrid progenies by PCR marker analysis and crossing with wide compatibility varieties.

    Science.gov (United States)

    Heuer, Sigrid; Miézan, Kouamé M

    2003-09-01

    Interspecific crossing of the African indigenous rice Oryza glaberrima with Oryza sativa cultivars is hindered by crossing barriers causing 100% spikelet sterility in F(1) hybrids. Since hybrids are partially female fertile, fertility can be restored by back crossing (BC) to a recurrent male parent. Distinct genetic models on spikelet sterility have been developed predicting, e.g., the existence of a gamete eliminator and/or a pollen killer. Linkage of sterility to the waxy starch synthase gene and the chromogen gene C, both located on chromosome 6, have been demonstrated. We selected a segregating BC(2)F(3) population of semi-sterile O. glaberrima x O. sativa indica hybrid progenies for analyses with PCR markers located at the respective chromosome-6 region. These analyses revealed that semi-sterile plants were heterozygous for a marker (OSR25) located in the waxy promoter, whereas fertile progenies were homozygous for the O. glaberrima allele. Adjacent markers showed no linkage to spikelet sterility. Semi-sterility of hybrid progenies was maintained at least until the F(4) progeny generation, suggesting the existence of a pollen killer in this plant material. Monitoring of reproductive plant development showed that spikelet sterility was at least partially due to an arrest of pollen development at the microspore stage. In order to address the question whether genes responsible for F(1) sterility in intraspecific hybrids ( O. sativa indica x japonica) also cause spikelet sterility in interspecific hybrids, crossings with wide compatibility varieties (WCV) were performed. WCV accessions possess "neutral" S-loci ( S(n)) improving fertility in intraspecific hybrids. This experiment showed that the tested S(n)-loci had no fertility restoring effect in F(1) interspecific hybrids. Pollen development was completely arrested at the microspore stage and grains were never obtained after selfing. This suggests that distinct or additional S-loci are responsible for sterility

  2. Unraveling the complex trait of harvest index with association mapping in rice (Oryza sativa L..

    Directory of Open Access Journals (Sweden)

    Xiaobai Li

    Full Text Available Harvest index is a measure of success in partitioning assimilated photosynthate. An improvement of harvest index means an increase in the economic portion of the plant. Our objective was to identify genetic markers associated with harvest index traits using 203 O. sativa accessions. The phenotyping for 14 traits was conducted in both temperate (Arkansas and subtropical (Texas climates and the genotyping used 154 SSRs and an indel marker. Heading, plant height and weight, and panicle length had negative correlations, while seed set and grain weight/panicle had positive correlations with harvest index across both locations. Subsequent genetic diversity and population structure analyses identified five groups in this collection, which corresponded to their geographic origins. Model comparisons revealed that different dimensions of principal components analysis (PCA affected harvest index traits for mapping accuracy, and kinship did not help. In total, 36 markers in Arkansas and 28 markers in Texas were identified to be significantly associated with harvest index traits. Seven and two markers were consistently associated with two or more harvest index correlated traits in Arkansas and Texas, respectively. Additionally, four markers were constitutively identified at both locations, while 32 and 24 markers were identified specifically in Arkansas and Texas, respectively. Allelic analysis of four constitutive markers demonstrated that allele 253 bp of RM431 had significantly greater effect on decreasing plant height, and 390 bp of RM24011 had the greatest effect on decreasing panicle length across both locations. Many of these identified markers are located either nearby or flanking the regions where the QTLs for harvest index have been reported. Thus, the results from this association mapping study complement and enrich the information from linkage-based QTL studies and will be the basis for improving harvest index directly and indirectly in rice.

  3. A novel 5-enolpyruvoylshikimate-3-phosphate (EPSP) synthase transgene for glyphosate resistance stimulates growth and fecundity in weedy rice (Oryza sativa) without herbicide.

    Science.gov (United States)

    Wang, Wei; Xia, Hui; Yang, Xiao; Xu, Ting; Si, Hong Jiang; Cai, Xing Xing; Wang, Feng; Su, Jun; Snow, Allison A; Lu, Bao-Rong

    2014-04-01

    Understanding evolutionary interactions among crops and weeds can facilitate effective weed management. For example, gene flow from crops to their wild or weedy relatives can lead to rapid evolution in recipient populations. In rice (Oryza sativa), transgenic herbicide resistance is expected to spread to conspecific weedy rice (Oryza sativa f. spontanea) via hybridization. Here, we studied fitness effects of transgenic over-expression of a native 5-enolpyruvoylshikimate-3-phosphate synthase (epsps) gene developed to confer glyphosate resistance in rice. Controlling for genetic background, we examined physiological traits and field performance of crop-weed hybrid lineages that segregated for the presence or absence of this novel epsps transgene. Surprisingly, we found that transgenic F2 crop-weed hybrids produced 48-125% more seeds per plant than nontransgenic controls in monoculture- and mixed-planting designs without glyphosate application. Transgenic plants also had greater EPSPS protein levels, tryptophan concentrations, photosynthetic rates, and per cent seed germination compared with nontransgenic controls. Our findings suggest that over-expression of a native rice epsps gene can lead to fitness advantages, even without exposure to glyphosate. We hypothesize that over-expressed epsps may be useful to breeders and, if deployed, could result in fitness benefits in weedy relatives following transgene introgression.

  4. Comparison of power output by rice (Oryza sativa) and an associated weed (Echinochloa glabrescens) in vascular plant bio-photovoltaic (VP-BPV) systems.

    Science.gov (United States)

    Bombelli, Paolo; Iyer, Durgaprasad Madras Rajaraman; Covshoff, Sarah; McCormick, Alistair J; Yunus, Kamran; Hibberd, Julian M; Fisher, Adrian C; Howe, Christopher J

    2013-01-01

    Vascular plant bio-photovoltaics (VP-BPV) is a recently developed technology that uses higher plants to harvest solar energy and the metabolic activity of heterotrophic microorganisms in the plant rhizosphere to generate electrical power. In the present study, electrical output and maximum power output variations were investigated in a novel VP-BPV configuration using the crop plant rice (Oryza sativa L.) or an associated weed, Echinochloa glabrescens (Munro ex Hook. f.). In order to compare directly the physiological performances of these two species in VP-BPV systems, plants were grown in the same soil and glasshouse conditions, while the bio-electrochemical systems were operated in the absence of additional energy inputs (e.g. bias potential, injection of organic substrate and/or bacterial pre-inoculum). Diurnal oscillations were clearly observed in the electrical outputs of VP-BPV systems containing the two species over an 8-day growth period. During this 8-day period, O. sativa generated charge ∼6 times faster than E. glabrescens. This greater electrogenic activity generated a total charge accumulation of 6.75 ± 0.87 Coulombs for O. sativa compared to 1.12 ± 0.16 for E. glabrescens. The average power output observed over a period of about 30 days for O. sativa was significantly higher (0.980 ± 0.059 GJ ha(-1) year(-1)) than for E. glabrescens (0.088 ± 0.008 GJ ha(-1) year(-1)). This work indicates that electrical power can be generated in both VP-BPV systems (O. sativa and E. glabrescens) when bacterial populations are self-forming. Possible reasons for the differences in power outputs between the two plant species are discussed.

  5. Role of ferritin in the rice tolerance to iron overload Papel da ferritina na tolerância de arroz ao excesso de ferro

    Directory of Open Access Journals (Sweden)

    Vivian Chagas da Silveira

    2009-08-01

    Full Text Available Plants ordinarily face iron (Fe deficiency, since this mineral is poorly available in soils under aerobic conditions. Nonetheless, wetland and irrigated rice plants can be exposed to excess, highly toxic Fe. Ferritin is a ubiquitous Fe-storage protein, important for iron homeostasis. Increased ferritin accumulation resulting from higher Fe availability was shown in some plant species. However, the role of ferritin in tolerance mechanisms to Fe overload in rice is yet to be established. In this study, recombinant rice ferritin was expressed in Escherichia coli, producing an anti-rice ferritin polyclonal antibody which was used to evaluate ferritin accumulation in two rice (Oryza sativa L. cultivars, either susceptible (BR-IRGA 409 or tolerant (EPAGRI 108 to Fe toxicity. Increased ferritin mRNA and protein levels resulting from excess Fe treatment were detected in both cultivars, with higher ferritin protein accumulation in EPAGRI 108 plants, which also reached lower shoot Fe concentrations when submitted to iron overload. The tolerance mechanism to excess Fe in EPAGRI 108 seems to include both restricted Fe translocation and increased ferritin accumulation. This is the first work that shows higher accumulation of the ferritin protein in an iron-excess tolerant Oryza sativa cultivar, providing evidence of a possible role of this protein in iron tolerance mechanisms.Deficiência de ferro (Fe ocorre freqüentemente em plantas, uma vez que este mineral é pouco disponível em condições aeróbicas. Plantas de arroz cultivadas sob alagamento, no entanto, estão sujeitas ao excesso de Fe, que pode ser extremamente tóxico. Alguns cultivares de arroz são resistentes a altas concentrações de ferro, mas os mecanismos fisiológicos responsáveis por essa resistência são pouco conhecidos. A ferritina é uma proteína de ampla distribuição e capaz de armazenar ferro, sendo considerada importante para a homeostase deste metal. Acúmulo de ferritina em

  6. Diseño de un dispositivo para determinar la fuerza de desprendimiento del grano de la panícula en el cultivo de arroz

    Directory of Open Access Journals (Sweden)

    Edenio Olivares Díaz

    2012-01-01

    Full Text Available La producción de arroz (oryza sativa en pequeña escala está incluida en el Programa Nacional de Arroz y es implementado por el gobierno para dar respuesta a la alta demanda del preciado grano en el consumo dentro de los cubanos; además, como vía para la sustitución de importaciones, importante tarea en la actualidad cubana. Pero existen varios problemas en la producción de arroz en pequeña escala; destacándose el estado de la maquinaria agrícola utilizada en el proceso de post-cosecha. La mayoría de la maquinas utilizadas en esta producción son construidas empíricamente por los pequeños productores utilizando resto de combinadas de arroz y otras piezas, además, realizan la construcción tomando como ejemplo maquinas importadas y sin contar con diseños científicamente fundamentados, trayendo consigo altas perdidas en el proceso de post-cosecha. Analizando lo anteriormente expuesto, en el presente trabajo se realiza el diseño de un dispositivo para determinar las fuerzas de desprendimiento del grano de la panícula en el cultivo de arroz; teniéndose en cuenta estudios realizados en la temática y características para su fácil construcción en el país. Además, el dispositivo es un aspecto importante para el estudio y la determinación de las propiedades físico¿mecánicas del sistema pedicelo-grano de arroz; permitiendo así diseños fundamentados en maquinarias agrícolas, fundamentalmente trilladoras, alcanzando disminuir las perdidas en el proceso de post-cosecha.

  7. HETEROSE EM ARROZ IRRIGADO HETEROSIS IN IRRIGATED RICE

    Directory of Open Access Journals (Sweden)

    Elcio Perpétuo Guimarães

    2007-09-01

    Full Text Available

    Com o objetivo de medir a magnitude da heterose, heterobeltiose e heterose padrão para oito características em híbridos de arroz (Oryza sativa L. irrigado, foram avaliados 19 híbridos resultantes de cruzamentos entre duas linhagens A e 17 linhagens restauradoras, em experimentos conduzidos em Goianira (GO, no delineamento de blocos ao acaso com três repetições. Observou-se a existência de variabilidade genética entre as restauradoras para a produtividade de grãos. Todos os híbridos apresentaram heterose positiva para produtividade de grãos e os de maiores valores tiveram heterose positiva para diferentes componentes de produtividade, indicando que, para esta característica, a heterose é o resultado da interação de heteroses dos componentes de produtividade. Para perfilhos e panículas por metro quadrado, os valores positivos e negativos foram semelhantes em números e magnitude nos três tipos de heterose. O comprimento das panículas e a massa de 100 grãos foram as variáveis que mais contribuíram para a heterose em produtividade de grãos. Todos os híbridos foram mais precoces que os genitores. A heterose para altura de plantas não alterou significativamente o porte dos híbridos porque todos os genitores eram baixos. A hibridação, mesmo entre cultivares do grupo Indica, aumentou a esterilidade de grãos.

    PALAVRAS-CHAVE: Oryza sativa; arroz híbrido; produtividade de grãos; componentes de rendimento.

    The objective of this study was to evaluate heterosis, heterobeltiosis and standard heterosis for eight characteristics of irrigated rice (Oryza sativa L. hybrids derivated from crosses among two A lines and 17 restorers lines. Field trials were conducted in Goinira, Goiás, Brazil. The experimental

  8. microRNAs targeting DEAD-box helicases are involved in salinity stress response in rice (Oryza sativa L.

    Directory of Open Access Journals (Sweden)

    Macovei Anca

    2012-10-01

    Full Text Available Abstract Background Rice (Oryza sativa L., one of the most important food crop in the world, is considered to be a salt-sensitive crop. Excess levels of salt adversely affect all the major metabolic activities, including cell wall damage, cytoplasmic lysis and genomic stability. In order to cope with salt stress, plants have evolved high degrees of developmental plasticity, including adaptation via cascades of molecular networks and changes in gene expression profiles. Posttranscriptional regulation, through the activity of microRNAs, also plays an important role in the plant response to salinity conditions. MicroRNAs are small endogenous RNAs that modulate gene expression and are involved in the most essential physiological processes, including plant development and adaptation to environmental changes. Results In the present study, we investigated the expression profiles of osa-MIR414, osa-MIR408 and osa-MIR164e along with their targeted genes, under salinity stress conditions in wild type and transgenic rice plants ectopically expressing the PDH45 (Pea DNA Helicase gene. The present miRNAs were predicted to target the OsABP (ATP-Binding Protein, OsDSHCT (DOB1/SK12/helY-like DEAD-box Helicase and OsDBH (DEAD-Box Helicase genes, included in the DEAD-box helicase family. An in silico characterization of the proteins was performed and the miRNAs predicted targets were validated by RLM-5′RACE. The qRT-PCR analysis showed that the OsABP, OsDBH and OsDSHCT genes were up-regulated in response to 100 and 200 mM NaCl treatments. The present study also highlighted an increased accumulation of the gene transcripts in wild type plants, with the exception of the OsABP mRNA which showed the highest level (15.1-fold change compared to control in the transgenic plants treated with 200 mM NaCl. Salinity treatments also affected the expression of osa-MIR414, osa-MIR164e and osa-MIR408, found to be significantly down-regulated, although the changes in mi

  9. Constitutive expression of a plant ferredoxin-like protein (pflp) enhances capacity of photosynthetic carbon assimilation in rice (Oryza sativa).

    Science.gov (United States)

    Chang, Hsiang; Huang, Hsiang-En; Cheng, Chin-Fu; Ho, Mei-Hsuan; Ger, Mang-Jye

    2017-04-01

    The plant ferredoxin-like protein (PFLP) gene, cloned from sweet peppers predicted as an electron carrier in photosynthesis, shows high homology to the Fd-I sequence of Arabidopsis thaliana, Lycopersicon esculentum, Oryza sativa and Spinacia oleracea. Most of pflp related studies focused on anti-pathogenic effects, while less understanding for the effects in photosynthesis with physiological aspects, such as photosynthesis rate, and levels of carbohydrate metabolites. This project focuses on the effects of pflp overexpression on photosynthesis by physiological evaluations of carbon assimilation with significant higher levels of carbohydrates with higher photosynthesis efficiency. In this report, two independent transgenic lines of rice plants (designated as pflp-1 and pflp-2) were generated from non-transgenic TNG67 rice plant (WT). Both transgenic pflp rice plants exhibited enhanced photosynthesis efficiency, and gas exchange rates of photosynthesis were 1.3- and 1.2-fold higher for pflp-1 and pflp-2 than WT respectively. Significantly higher electron transport rates of pflp rice plants were observed. Moreover, photosynthetic products, such as fructose, glucose, sucrose and starch contents of pflp transgenic lines were increased accordingly. Molecular evidences of carbohydrate metabolism related genes activities (osHXK5, osHXK6, osAGPL3, osAGPS2α, osSPS, ospFBPase, oscFBPase, and osSBPase) in transgenic lines were higher than those of WT. For performance of crop production, 1000-grain weight for pflp-1 and pflp-2 rice plants were 52.9 and 41.1 g that were both significantly higher than 31.6 g for WT, and panicles weights were 1.4- and 1.2-fold higher than WT. Panicle number, tiller number per plants for pflp rice plants were all significantly higher compared with those of WT where there was no significant difference observed between two pflp rice plants. Taken altogether; this study demonstrated that constitutive pflp expression can improve rice production by

  10. De novo Transcriptome Assembly of Phomopsis liquidambari Provides Insights into Genes Associated with Different Lifestyles in Rice (Oryza sativa L.)

    Science.gov (United States)

    Zhou, Jun; Li, Xin; Chen, Yan; Dai, Chuan-Chao

    2017-01-01

    The mechanisms that trigger the switch from endophytic fungi to saprophytic fungi are largely unexplored. Broad host range Phomopsis liquidambari is established in endophytic and saprophytic systems with rice (Oryza sativa L.). Endophytic P. liquidambari promotes rice growth, increasing rice yield and improving the efficiency of nitrogen fertilizer. This species's saprophytic counterpart can decompose rice litterfall, promoting litter organic matter cycling and the release of nutrients and improving the soil microbial environment. Fluorescence microscopy, confocal laser scanning microscopy and quantitative PCR investigated the colonization dynamics and biomass of P. liquidambari in rice in vivo. P. liquidambari formed infection structures similar to phytopathogens with infected vascular tissues that systematically spread to acrial parts. However, different from pathogenic infection, P. liquidambari colonization exhibits space restriction and quantity restriction. Direct comparison of a fungal transcriptome under three different habitats provided a better understanding of lifestyle conversion during plant-fungi interactions. The isolated total RNA of Ck (pure culture), EP (endophytic culture) and FP (saprophytic culture) was subjected to Illumina transcriptome sequencing. To the best of our knowledge, this study is the first to investigate Phomopsis sp. using RNA-seq technology to obtain whole transcriptome information. A total of 27,401,258 raw reads were generated and 22,700 unigenes were annotated. Functional annotation indicated that carbohydrate metabolism and biosynthesis of secondary metabolites played important roles. There were 2522 differentially expressed genes (DEGs) between the saprophytic and endophytic lifestyles. Quantitative PCR analysis validated the DEGs of RNA-seq. Analysis of DEGs between saprophytic and endophytic lifestyles revealed that most genes from amino acids metabolism, carbohydrate metabolism, fatty acid biosynthesis, secondary

  11. Gene space dynamics during the evolution of Aegilops tauschii, Brachypodium distachyon, Oryza sativa, and Sorghum bicolor genomes.

    Science.gov (United States)

    Massa, A N; Wanjugi, H; Deal, K R; O'Brien, K; You, F M; Maiti, R; Chan, A P; Gu, Y Q; Luo, M C; Anderson, O D; Rabinowicz, P D; Dvorak, J; Devos, K M

    2011-09-01

    Nine different regions totaling 9.7 Mb of the 4.02 Gb Aegilops tauschii genome were sequenced using the Sanger sequencing technology and compared with orthologous Brachypodium distachyon, Oryza sativa (rice), and Sorghum bicolor (sorghum) genomic sequences. The ancestral gene content in these regions was inferred and used to estimate gene deletion and gene duplication rates along each branch of the phylogenetic tree relating the four species. The total gene number in the extant Ae. tauschii genome was estimated to be 36,371. The gene deletion and gene duplication rates and total gene numbers in the four genomes were used to estimate the total gene number in each node of the phylogenetic tree. The common ancestor of the Brachypodieae and Triticeae lineages was estimated to have had 28,558 genes, and the common ancestor of the Panicoideae, Ehrhartoideae, and Pooideae subfamilies was estimated to have had 27,152 or 28,350 genes, depending on the ancestral gene scenario. Relative to the Brachypodieae and Triticeae common ancestor, the gene number was reduced in B. distachyon by 3,026 genes and increased in Ae. tauschii by 7,813 genes. The sum of gene deletion and gene duplication rates, which reflects the rate of gene synteny loss, was correlated with the rate of structural chromosome rearrangements and was highest in the Ae. tauschii lineage and lowest in the rice lineage. The high rate of gene space evolution in the Ae. tauschii lineage accounts for the fact that, contrary to the expectations, the level of synteny between the phylogenetically more related Ae. tauschii and B. distachyon genomes is similar to the level of synteny between the Ae. tauschii genome and the genomes of the less related rice and sorghum. The ratio of gene duplication to gene deletion rates in these four grass species closely parallels both the total number of genes in a species and the overall genome size. Because the overall genome size is to a large extent a function of the repeated

  12. Seed Dormancy in Red Rice (Oryza sativa) (IX. Embryo Fructose-2,6-Bisphosphate during Dormancy Breaking and Subsequent Germination).

    Science.gov (United States)

    Footitt, S.; Cohn, M. A.

    1995-04-01

    Fructose-2,6-bisphosphate (Fru-2,6-bisP) was evaluated as a potential marker for the dormancy-breaking phase or the germination phase before pericarp splitting in red rice (Oryza sativa). During 4 h of imbibition at 30[deg]C, Fru-2,6-bisP of dehulled dormant and nondormant seeds increased to 0.26 and 0.38 pmol embryo-1, respectively. In nondormant seeds, embryo Fru-2,6-bisP content remained stable until the onset of pericarp splitting (12 h) and increased rapidly thereafter. In dormant seeds, Fru-2,6-bisP declined to 0.09 pmol embryo-1 at 24 h. Embryo Fru-2,6-bisP was correlated with O2 uptake of dormant and nondormant seeds. A 24-h exposure of dehulled, water-imbibed, dormant seeds to treatments yielding >90% germination (sodium nitrite [4 mM], propionic acid [22 mM], methyl propionate [32 mM], propanol [75 mM], and propionaldehyde [40 mM]) led to changes in embryo Fru-2,6-bisP that were unrelated to the final germination percentages. Furthermore, a 2-h pulse of propionaldehyde increased Fru-2,6-bisP 4-fold but did not break dormancy. Whereas nitrite and propionaldehyde increased Fru-2,6-bisP to 0.33 pmol embryo-1 after 2 h of contact, propionic acid and methyl propionate did not increase Fru-2,6-bisP above the untreated control. In all cases, further increases in Fru-2,6-bisP occurred after pericarp splitting. However, the plateau Fru-2,6-bisP attained during chemical contact was inversely correlated with elapsed time to 30% germination (r = -0.978). Therefore, although Fru-2,6-bisP is not a universal marker for dormancy release, its rapid increase during nitrite and propionaldehyde treatments suggests that events associated with dormancy breaking can occur within 2 h of chemical treatment.

  13. Fontes e doses de giberelina no desempenho de arroz anão em biotestes

    OpenAIRE

    Raphael Gonçalves Martins; Paulo Roberto de Camargo e Castro; Diego Kitahara Araujo; João Marcelo Silva; Maria Bernadete Gonçalves Martins

    2012-01-01

    Plantas mutantes de arroz anão (Oryza sativa L.) foram tratadas com três diferentes concentrações de ácido giberélico originários de duas fontes (Gibberellin e Pro-Gibb) e submetidas à determinaçãoda maior altura, em relação ao nível do solo. As mensurações foram realizadas a cada 7 dias em casa de vegetação à temperatura ambiente média de 25°C. Concluiu-se que a concentração de 10 mg L-1 de giberelina proveniente de Pro-Gibb ou Gibberellin mostrou-se suficiente para causar o desempenho difer...

  14. Genome wide expression analysis of CBS domain containing proteins in Arabidopsis thaliana (L. Heynh and Oryza sativa L. reveals their developmental and stress regulation

    Directory of Open Access Journals (Sweden)

    Sopory Sudhir K

    2009-04-01

    Full Text Available Abstract Background In Arabidopsis thaliana (L. Heynh and Oryza sativa L., a large number of genes encode proteins of unknown functions, whose characterization still remains one of the major challenges. With an aim to characterize these unknown proteins having defined features (PDFs in plants, we have chosen to work on proteins having a cystathionine β-synthase (CBS domain. CBS domain as such has no defined function(s but plays a regulatory role for many enzymes and thus helps in maintaining the intracellular redox balance. Its function as sensor of cellular energy has also been widely suggested. Results Our analysis has identified 34 CBS domain containing proteins (CDCPs in Arabidopsis and 59 in Oryza. In most of these proteins, CBS domain coexists with other functional domain(s, which may indicate towards their probable functions. In order to investigate the role(s of these CDCPs, we have carried out their detailed analysis in whole genomes of Arabidopsis and Oryza, including their classification, nomenclature, sequence analysis, domain analysis, chromosomal locations, phylogenetic relationships and their expression patterns using public databases (MPSS database and microarray data. We have found that the transcript levels of some members of this family are altered in response to various stresses such as salinity, drought, cold, high temperature, UV, wounding and genotoxic stress, in both root and shoot tissues. This data would be helpful in exploring the so far obscure functions of CBS domain and CBS domain-containing proteins in plant stress responses. Conclusion We have identified, classified and suggested the nomenclature of CDCPs in Arabidopsis and Oryza. A comprehensive analysis of expression patterns for CDCPs using the already existing transcriptome profiles and MPSS database reveals that a few CDCPs may have an important role in stress response/tolerance and development in plants, which needs to be validated further through

  15. Biological Activity of Essential Oils from Leaves and Fruits of Pepper Tree (Schinus molle L. to Control Rice Weevil (Sitophilus oryzae L. Bioactividad de aceites esenciales de hojas y frutos del aguaribay (Schinus molle L. en el gorgojo del arroz (Sitophilus oryzae L.

    Directory of Open Access Journals (Sweden)

    Verónica Benzi

    2009-06-01

    Full Text Available Rice weevil (Sitophilus oryzae L. is a primary insect pest of stored grain. The development of resistance resulted in the application of synthetic insecticides. In recent years many plant essential oils have provided potential alternatives to currently used insect control agents. The Brazilian pepper tree (Schinus molle L. var. areira (L. DC. (Anacardiaceae has different biological properties such as insecticidal activity. In this study, repellent, fumigant activity, nutritional indices, and feeding deterrent action were evaluated on S. oryzae adults. Filter paper impregnation was used to test fumigant toxicity, whereas treated whole wheat was used to evaluate repellent activity and a flour disk bioassay was done to evaluate feeding deterrent action and nutritional index alteration. Leaf essential oils showed repellent effects at both concentrations (0.04 and 0.4% w/w, while fruit essential oils lacked repellent activity. Both plant oils altered nutritional indices. Fruit essential oils had a strong feeding deterrent action (62% while leaves had a slight effect (40.6%. With respect to fumigant activity, neither of the essential oils was found to be toxic.El gorgojo del arroz (Sitophilus oryzae. L. es un insecto-plaga de infestación primaria de granos. El uso de insecticidas sintéticos ha desarrollado fenómenos de resistencia. En los últimos años los aceites esenciales se presentan como una alternativa en el control de insectos-plaga. El aguaribay (Schinus molle L. var. areira (L. DC. (Anacardiaceae es una planta con diferentes propiedades biológicas entre las que se destacan el uso como insecticida. El objetivo de este estudio fue evaluar la actividad fumigante, repelente, los índices nutricionales y la actividad antialimentaria de los aceites esenciales de hojas y frutos de S. molle var. areira en adultos de S. oryzae. Para la actividad fumigante se utilizó la técnica de impregnación de papeles de filtro; para la actividad repelente

  16. Isovitexin-2'-O-beta-[6-O-E-p-coumaroylglucopyranoside] from UV-B irradiated leaves of rice, Oryza sativa L. inhibits fertility of Helicoverpa armigera.

    Science.gov (United States)

    Caasi-Lit, Merdelyn T; Tanner, Gregory J; Nayudu, Murali; Whitecross, Malcolm I

    2007-01-01

    UV-B irradiated rice leaves (Oryza sativa L.) contained four closely related flavonoids, with either an isoorientin or isovitexin aglycone. These flavonoids have previously been purified and characterized, and were added to artificial diets of the African bollworm (Helicoverpa armigera Hübner) at 0.1x concentration found in irradiated rice leaves. Consumption of different diets had relatively small effects on laval, pupal and adult duration, weight and survival, indicating the insects lived near normal life cycles on all diets. However, one of the compounds, flavonoid IIa, isovitexin-2''-O-beta-[6-O-E-p-coumaroylglucopyranoside], dramatically reduced the number of fertile eggs laid to 7% of control insects (Pisoorientin-2''-O-beta-[6-O-E-p-coumaroylglucopyranoside] or isoorientin-2''-O-beta-[6-O-E-p-feruloylglucopyranoside], were not significantly different to control diets.

  17. Impact of ambient and elevated levels of ozone on growth, reproductive development and yield of two cultivars of rice ( Oryza sativa L.)

    Energy Technology Data Exchange (ETDEWEB)

    Agrawal, S. B.; Abhijit, S.

    2009-07-01

    Tow locally grown high yielding varieties of rice (Oryza sativa L. var Malviya dhan 36 and var shivani), were transplanted within the open top chambers (OTCs) at the age of 20 days. five different experimental plots were designed as open plot (OP), non-filtered chamber (NFCs), NFCs with 10 ppb ozone (O{sub 3}), NFCs with 30 ppb O{sub 3} and filtered chamber (FCs) to assess the impact of ambient and elevated levels of O{sub 3} on rice. Twelve hourly monitoring of O{sub 3} and measurements of meteorological variables were done at experimental site during the growth period of rice plants. Morphological, reproductive, physico logical and biochemical parameters were assessed to evaluate the responses of rice cultivars to ambient and elevated levels of O{sub 3}. (Author)

  18. Genetic Analysis of a Biomass Mutant in Oryza sativa%一个水稻生物产量突变体的遗传分析

    Institute of Scientific and Technical Information of China (English)

    廖子荣; 黄东益; 牛杰; 李俏; 吴安迪

    2008-01-01

    [Objective] The study aimed to reveal the genetic model of a biomass mutant in Oryza sativa. [Method] ln the process of seresning and iden-tification of Bar-transgenic rice, a biomass mutant was found in 10 lines of TI progenies. The mutant was investigated for genetic analysis and agronomic traits by herbicide spraying and PCR amplification. [Result] The segregation ratio is consistent with mendelian law(3:1). The mutant assumed not only higher plant height, wider straw and earlier florescence, but also more tillers, bigger spikes and resuhantly higher biomass. PCR detections indicated that no co-segregation was observed between mutant traits and target gene(Bar) in the T-DNA inserted, proving that the mutant is not caused by the insertion of T-DNA containing target gene (Bar). [Conclusion] Our study may avail to understand the cloning of mutant gene and the mechanism of the mutant gene on biomass.

  19. Genome-wide comparative in silico analysis of the RNA helicase gene family in Zea mays and Glycine max: a comparison with Arabidopsis and Oryza sativa.

    Science.gov (United States)

    Xu, Ruirui; Zhang, Shizhong; Huang, Jinguang; Zheng, Chengchao

    2013-01-01

    RNA helicases are enzymes that are thought to unwind double-stranded RNA molecules in an energy-dependent fashion through the hydrolysis of NTP. RNA helicases are associated with all processes involving RNA molecules, including nuclear transcription, editing, splicing, ribosome biogenesis, RNA export, and organelle gene expression. The involvement of RNA helicase in response to stress and in plant growth and development has been reported previously. While their importance in Arabidopsis and Oryza sativa has been partially studied, the function of RNA helicase proteins is poorly understood in Zea mays and Glycine max. In this study, we identified a total of RNA helicase genes in Arabidopsis and other crop species genome by genome-wide comparative in silico analysis. We classified the RNA helicase genes into three subfamilies according to the structural features of the motif II region, such as DEAD-box, DEAH-box and DExD/H-box, and different species showed different patterns of alternative splicing. Secondly, chromosome location analysis showed that the RNA helicase protein genes were distributed across all chromosomes with different densities in the four species. Thirdly, phylogenetic tree analyses identified the relevant homologs of DEAD-box, DEAH-box and DExD/H-box RNA helicase proteins in each of the four species. Fourthly, microarray expression data showed that many of these predicted RNA helicase genes were expressed in different developmental stages and different tissues under normal growth conditions. Finally, real-time quantitative PCR analysis showed that the expression levels of 10 genes in Arabidopsis and 13 genes in Zea mays were in close agreement with the microarray expression data. To our knowledge, this is the first report of a comparative genome-wide analysis of the RNA helicase gene family in Arabidopsis, Oryza sativa, Zea mays and Glycine max. This study provides valuable information for understanding the classification and putative functions of

  20. Knock-down of OsDCL2 in rice negatively affects maintenance of the endogenous dsRNA virus, Oryza sativa endornavirus.

    Science.gov (United States)

    Urayama, Syunichi; Moriyama, Hiromitsu; Aoki, Nanako; Nakazawa, Yukihiro; Okada, Ryo; Kiyota, Eri; Miki, Daisuke; Shimamoto, Ko; Fukuhara, Toshiyuki

    2010-01-01

    An endogenous double-stranded RNA (dsRNA), which has recently been recognized as the dsRNA virus Oryza sativa endornavirus (OsEV), is found in many strains of cultivated rice (Oryza sativa). Small RNAs derived from OsEV dsRNA were detected, indicating that the RNA silencing machinery recognizes OsEV dsRNA. The existence of OsEV in knock-down (KD) lines of five genes of RNA-dependent RNA polymerase (OsRDR1-OsRDR5) or two genes of Dicer-like protein (OsDCL2 or OsDCL3a) was examined to characterize the relationship between the host RNA silencing system and the propagation of this dsRNA virus. OsEV was not detected in OsRDR4-KD or OsDCL2-KD T(1) lines. We attempted to introduce OsEV into these KD lines by crossing them with OsEV-carrying plants because of the efficient transmission of OsEV to F(1) plants via pollen or ova. All OsRDR4-KD but only some OsDCL2-KD F(1) plants contained OsEV. Some OsDCL2-KD F(1) plants consisted of OsEV-carrying and OsEV-free cells. These results suggest that the maintenance of OsEV is unstable in OsDCL2-KD plants. Furthermore, the amount of OsEV-derived small interfering RNA (vsiRNA) in the OsDCL2-KD plants increased relative to the wild type. This increased level of vsiRNA may cause OsEV instability during cell division.

  1. Endophytic colonization of rice (Oryza sativa L. by the diazotrophic bacterium Burkholderia kururiensis and its ability to enhance plant growth

    Directory of Open Access Journals (Sweden)

    Katherine A. Mattos

    2008-09-01

    Full Text Available Burkholderia kururiensis is a diazotrophic bacterium originally isolated from a polluted aquifer environment and presents a high level of similarity with the rice endophyte "B. brasilensis" species. This work assessed the ability of B. kururiensis to endophytically colonize rice plantlets by monitoring different tissues of root-inoculated plants for the presence of bacterial growth in different media, electron microscopy and by 16S rDNA analysis. Observations of roots, stems and leaves of inoculated rice plantlets by electron microscopy revealed B. kururiensis colonization predominantly on root hair zones, demonstrating endophytic colonization primarily through the endodermis, followed by spreading into xylem vessels, a possible pathway leading to aerial parts. Although indifferent for the bacterial growth itself, addition of a nitrogen source was a limiting factor for endophytic colonization. As endophytic colonization was directly associated to an enhanced plant development, production of phytohormone auxin/indole-3-acetic acid by B. kururiensis was assayed with transgenic rice plantlets containing an auxin-responsive reporter (DR5-GUS. Our findings suggest the ability of auxin production by plant-associated B. kururiensis which may have a stimulatory effect on plant development, as evidenced by activation of DR5-GUS. We hereby demonstrate, for the first time, the ability of B. kururiensis to endophytically colonize rice, promoting both plant growth and rice grain yield.Burkholderia kururiensis é uma bactéria diazotrófica, originalmente isolada de um ambiente aquático poluído e apresenta alto nível de similaridade com a espécie endofítica "B. brasilensis" encontrada na planta de arroz. Este artigo demonstrou a habilidade de B. kururiensis colonizar endofiticamente plântulas de arroz, após esta bactéria ter sido inoculada na raiz das plantas. Esta capacidade foi confirmada pelo crescimento bacteriano em diferentes tecidos da planta

  2. Controle de arroz-vermelho (Oryza sp. com o herbicida nicosulfuron ou a mistura formulada de imazethapyr + imazapic Control of red rice (Oryza sp. with herbicide nicosulfuron or imazethapyr + imazapic formulate mixture

    Directory of Open Access Journals (Sweden)

    L.C. Fontana

    2007-12-01

    Full Text Available Foi avaliada a eficácia no controle de arroz-vermelho com o herbicida nicosulfuron ou a mistura formulada de imazethapyr + imazapic. O experimento foi conduzido em casa de vegetação da Faculdade de Agronomia Eliseu Maciel (UFPel, no município de Capão do Leão (RS, na estação de crescimento 2005/06, em delineamento experimental de blocos ao acaso, com quatro repetições. Os tratamentos foram arranjados em esquema fatorial 2 x 7, sendo o fator A os herbicidas e o fator B as doses dos herbicidas (0, 0,25, 0,50, 0,75, 1,0, 1,25 e 1,50 L ha-1. A aplicação foi feita sobre as plantas de arroz-vermelho em estádio de desenvolvimento V4. As variáveis analisadas foram controle, estatura da planta e massa seca da parte aérea. Para as variáveis respostas foi verificada interação significativa entre os fatores estudados. Incrementos nas doses dos herbicidas resultaram em respostas crescentes de controle, com redução na taxa de crescimento das plantas e produção de massa seca da parte aérea. Os resultados mostraram que o arroz-vermelho é controlado pelos herbicidas testados. A eficácia de controle não é restrita à mistura formulada de imazethapyr + imazapic, ocorrendo também com o herbicida nicosulfuron a partir de 40 g ha-1.Red rice control efficacy using nicosulfuron or a formulated mixture of imazethapyr + imazapic was evaluated. A greenhouse experiment was carried out at Faculdade de Agronomia Eliseu Maciel (UFPel in Capão do Leão (RS, during the 2005/2006 growing season, in a randomized complete block design and four replications. Treatments were arranged in a 2 x 7 factorial, with factor A being the herbicides and factor B the herbicide rates (0, 0.25, 0.50, 0.75, 1.0, 1.25 and 1.50 L ha-1. The herbicides were applied over red rice plants at the V4 development stage. Control, plant height and aerial dry mass were evaluated. There was a significant interaction for the variables between the factors studied. Increased herbicide

  3. Period, subculture number and culture color influence on the isolated Magnaporthe oryzae sporulation at the Tocantins State Influencia de la edad, número de repicagens y coloración de lo micelio en la esporulación del aislados de Magnaporthe oryzae, causante de lo añublo del arroz en el estado de Tocantins Influência da idade, número de repicagens e coloração dos micélios na esporulação de isolados de Magnaporthe oryzae, causador da brusone em arroz no estado do Tocantins

    Directory of Open Access Journals (Sweden)

    Ildon Rodrigues Nascimento

    2011-09-01

    Full Text Available

    O fungo Magnaporthe oryzae, causador da brusone do arroz, apresenta uma série de limitações de cultivo em condições controladas. Algumas características podem ser variáveis até para um mesmo isolado e exigem adaptações ou inovações dos pesquisadores para possibilitar o desenvolvimento de ensaios. Este trabalho teve o objetivo verificar, de isolados monospóricos de M. oryzae da raça IA-1 coletados no Projeto Rio Formoso, município de Formoso do Araguaia, a durabilidade das culturas armazenadas em laboratório, a quantidade máxima de repicagens para manter a produção satisfatória de conídios pelas colônias e a relação de diferentes colorações das culturas em meio BDA com a produção de conídios. Para tanto, realizou-se três ensaios em delineamento inteiramente casualizado. No Ensaio I, utilizaram-se culturas com 10, 14, 18, 22, 26 e 30 dias após a repicagem. No Ensaio II, utilizaram-se culturas com 0, 1, 2, 3 e 4 repicagens a partir da cultura original. No Ensaio III, classificaram-se as culturas como Negra, Centro cinza com largas bordas brancas, Cinza, Centro cinza com estreitas bordas brancas e Branca. Maiores esporulações de M. oryzae foram obtidas em culturas com 14 dias após a repicagem, na segunda repicagem e de coloração negra.

    The fungus Magnaporthe oryzae, that caused the blast rice disease, present several restrictions for cultivation under laboratory conditions. Any characters can be variable even for the same isolate and need adaptations or innovations of the researchers for experimental development. This work aimed to verify the M. oryzae monosporic isolates of the IA-1 race collected at Projeto Rio Formoso, Formoso do Araguaia Municipality, the period of the cultures stored under laboratory conditions, the maximum quantity of the subcultures to keep the production of the conidia for the colonies satisfactory and

  4. Genetic, physiological and modelling approaches towards tolerance to salinity and low nitrogen supply in rice (Oryza sativa L.)

    NARCIS (Netherlands)

    Manneh, B.

    2004-01-01

    Keywords:   Rice, O ryza sativa , yield potential, yield gap, salinity, nitrogen supply, agro-ecosystems, Recombinant Inbred Line, genotype × environment interaction, yield components, adaptability, molecular markers, QTL, biomass, leaf area, leaf N, dry matter a

  5. Molecular mapping of a novel gene, Grh5, conferring resistance to green rice leafhopper (Nephotettix cincticeps Uhler) in rice, Oryza sativa L.

    Science.gov (United States)

    Fujita, Daisuke; Doi, Kazuyuki; Yoshimura, Atsushi; Yasui, Hideshi

    2006-08-01

    The green rice leafhopper (GRH), Nephotettix cincticeps Uhler, is one of the most serious insect pests affecting cultivated rice (Oryza sativa L.) in temperate regions of East Asia. An accession of the wild rice species, Oryza rufipogon Griff. (W1962), was found to be highly resistant to GRH by an antibiosis test. To understand the genetic basis of the GRH resistance, a BC1F1 population derived from a cross between a susceptible Japonica variety, Taichung 65 (T65), and a highly resistant accession W1962 was analyzed by quantitative trait loci (QTL) mapping. A single major QTL for GRH resistance was detected on rice chromosome 8. A nearly isogenic population containing segments of the targeted QTL region derived from W1962 was then developed through advanced backcrossing with marker-assisted selection. Further molecular mapping using a BC4F2 population revealed that a new resistance gene, designated as Green rice leafhopper resistance 5 (Grh5), was located on the distal region of the long arm of chromosome 8 and tightly linked to the simple sequence repeat markers RM3754 and RM3761. A nearly isogenic line (NIL) carrying Grh5 was subsequently developed in the progeny of the mapping population. The resistance level of Grh5-NIL was compared with those of developed NILs for GRH resistance and was found to have the highest resistance. The DNA markers found to be closely linked to Grh5 would be useful for marker-assisted selection for the improvement of resistance to GRH in rice.

  6. Comparison of physiological and anatomical changes of C3 (Oryza sativa [L.]) and C4 (Echinochloa crusgalli [L.]) leaves in response to drought stress

    Science.gov (United States)

    Hamim, Hamim; Banon, Sri; Dorly, Dorly

    2016-01-01

    The experiment aimed to analyse the different response of C3 (Oryza sativa L.) and C4 (Echinochloa crusgalli L.) species to drought stress based on physiological and anatomical properties. Seeds of rice (Oryza sativa) and Echinochloa (Echinochloa crusgalli) were grown in 15 cm (D) pot for 6 weeks under well-watered conditions. After 6 weeks the plants were divided into two groups, (1) well-watered which were watered daily, and (2) drought stress which were withheld from watering for 6 days. After 6 days of drought, the plants were then re-watered to analyse plant recovery. During drought period, the plants were analysed for growth, leaf relative water content (RWC), photosynthesis, and leaf anatomy. Drought stress significantly reduced leaf RWC of both species, but the reduction was bigger in rice than in Echinochloa. The maximum efficiency of photosynthesis (Fv/Fm) was decrease significantly in response to drought stress by about 48.04% in rice, while it was only 34.40% in Echinochloa. Anatomical analysis showed drought treatment tended to reduce leaf thickness in the area of bulliform cell, major- as well as intervein and xylem diameter, more in Echinochloa than in rice, suggesting that the decrease of vein and xylem diameter is among the anatomical parameters that is important to overcome from drought stress in Echinochloa. The number of chloroplast in the mesophyll cell and bundle sheath cell (BSC) was different between these two species, where in Echinochloa chloroplast was found in both mesophyll as well as BSC, while in rice it was only found in mesophyll cell, confirmed that Echinochloa is a C4 and rice is a C3 species. Interestingly, in Echinochloa, the number of chloroplast was significantly increased due to drought stress in BSC, but not in mesophyll cell. The number of starch granules also dramatically increased in response to drought in the mesophyll cells of rice and Echinochloa, and in the bundle sheath cell of Echinochloa which indicate that C3

  7. Suscetibilidade de biótipos de arroz-vermelho e de cultivares de arroz irrigado ao herbicida imazethapyr Susceptibility of red rice biotypes and commercial rice cultivars to imazethapyr

    Directory of Open Access Journals (Sweden)

    S.H.B. Dornelles

    2010-01-01

    Full Text Available Para avaliar a suscetibilidade de biótipos de arroz-vermelho(Oryza sativa e cultivares comerciais de arroz ao herbicida imazethapyr, realizou-se um ensaio em casa de vegetação com cinco biótipos de arroz-vermelho (acessos Santa Maria 5, Pelotas 3, Rio Pardo 1, Manoel Viana 2 e Catuçaba 1, dois cultivares comerciais de arroz: Clearfield® (IRGA 422 CL e Puitá INTA CL e um cultivar convencional (IRGA 417. Utilizou-se a metodologia de curvas de dose-resposta proposta por Seefeldt et al. (1995. A metodologia de curvas de resposta foi gerada a partir dos parâmetros do modelo logístico e dos valores de I50. Os biótipos de arroz-vermelho e os cultivares foram submetidos a seis doses do herbicida imazethapyr (0; 33,12; 66,25; 132,5; 265,0; e 530,0 g i.a. ha-1. As plantas de arroz foram contadas e coletadas no 20º dia após a aplicação dos tratamentos. A análise do percentual de dano foi realizada através de avaliação visual da fitointoxicação (%, massa verde e massa seca das plantas. Analisando as curvas e os resultados da análise da variância, pode-se inferir que os cultivares Clearfield Irga 422 CL e Puitá INTA CL foram significativamente iguais ao biótipo de arroz-vermelho Catuçaba 1, resistindo a doses de imazethapyr superiores à recomendada em campo para o sistema Clearfield®. Os biótipos Manoel Viana 2, Santa Maria 5 e Pelotas 3 agruparam-se com o cultivar convencional IRGA 417, sendo suscetíveis à dose comercial do herbicida. O biótipo Rio Pardo 1 também é resistente ao herbicida imazethapyr, porém menos resistente que o biótipo Catuçaba 1.To evaluate the susceptibility of biotypes of red rice (Oryza sativa and commercial rice cultivars to the herbicide imazethapyr, a greenhouse assay was conducted with five red rice biotypes (accesses Santa Maria 5, Pelotas 3, Rio Pardo 1, 2 and Manoel Viana Catuçaba 1, two commercial rice cultivars: Clearfield ® (Irga CL 422 and CL Puit INTA, and a conventional cultivar (Irga

  8. BIOCHEMICAL AND MOLECULAR CHARACTERIZATION OF RED RICE ECOTYPES FROM THE RIO GRANDE DO SUL STATE, BRAZIL CARACTERIZAÇÃO BIOQUÍMICA E MOLECULAR DE ACESSOS DE ARROZ VERMELHO COLETADOS NO ESTADO DO RIO GRANDE DO SUL

    Directory of Open Access Journals (Sweden)

    Gaspar Malone

    2007-09-01

    Full Text Available

    Red rice is one of the most important weeds of cultivated rice in Brazil. On the other hand, red rice constitutes a collection of genes lost during the cultivated rice domestication process and has a fundamental importance for recovery of promising genic constitutions. This study had the objective to analyze the genetic variability of a colletion of red rice (Oryza sativa L. ecotypes from Rio Grande do Sul State, Brazil, through isoenzimatic and microsatellite markers. Thirty four accesses from the Seed and Biotechnology Laboratory germplasm bank, at Federal University of Pelotas, were analyzed using six isoenzimatic systems and nineteen microsatellite markers. Twenty-three biochemical and 54 molecular alleles were identified and used to estimate the polymorphism (PIC and genetic similarity indexes. The analyzed red rice population presents large genetic variability, evidencing the potentiality to map characteristics of interest to seed physiology. Biochemical markers of the isoenzime type and molecular markers of the microsatellite type are efficient to estimate the genetic variability in red rice ecotypes.

    KEY-WORDS: Oryza sativa; biochemical markers; microsatellite markers; genetic variability.

    O arroz vermelho é uma das principais espécies daninhas para cultivo de arroz no Brasil. Por outro lado, constitui-se num acervo de genes perdidos durante a domesticação do arroz cultivado, que poderá ser importante para a recuperação de constituições gênicas promissoras. O objetivo desde trabalho foi analisar a variabilidade genética de uma coleção de acessos de arroz vermelho (Oryza sativa L. coletados no Estado de Rio Grande do Sul, Brasil, através de marcadores bioquímicos do tipo isoenzimas, e marcadores moleculares do tipo microssatélites. Trinta e quatro acessos

  9. Influencia del citoplasma sobre la expresión del centro blanco y temperatura de gelatinización en arroz (Oryza sativa. L.

    Directory of Open Access Journals (Sweden)

    Baena García Diosdado

    1995-12-01

    Full Text Available

    La investigación se adelantó en el Centro Internacional de Agricultura Tropical (CIAT durante 1989-1991. No hubo influencia del citoplasma en la expresión del centro blanco y temperatura de gelatinización. El orden de dominancia El orden de dominancia de los progenitores para el carácter ausencia de centro blanco fue Colombia 1 > 1R5 = L6850 > IRAT8. El cultivo in vitro influyó sobre la expresión del centro blanco y la temperatura de gelatinización en los progenitores y posiblemente en las poblaciones segregantes. El medio ambiente influyó más sobre los progenitores LR5y L6850 (y sus progenies. La selección hacia centro blanco bajo parece no ser eficiente en generaciones tempranas, especialmente en el caso de L6850 e IRAT8, en contraste con la mayor eficiencia de la selección por temperatura de gelatinización (heredabilidad alta. Se encontró un alto índice de concordancia (79%, entre la escala 0 a 5 utilizada para calificación subjetiva de centro blanco y el área del grano afectada por centro blanco, (lectura hecha en esteroscopio con micrómetro.

    A research work was undertaken at the Centro International de Agricultura Tropical (CIAT, during 1989-91. There was no maternal effect on the express ion of white center and gelatinization temperature but rather different degrees of dominance, the order of dominance was Colombia 1 > IR5 = L6850 > LRAT8; the in vitro culture influenced the express ion of white belly and the gelatinization temperature in the parents and possibly in their progenies; the influence of the environment was greater on IRAT8 and L6850 (and its progenies; selection for low white belly seemed to be not efficient in early generations; but selection for the desired gelatinization temperature is more efficient (high heritability. With the F3 samples, a subjective evaluation was carried out (zero: endosperm without white belly, and five: completely chalky, There was found a high index of concordance (79%, between the 0-5 scale and the white belly area estimated throughout the use of the stereoscope with a micrometer.

  10. Competition between rice (Oryza sativa L.) and (barnyardgrass (Echinochloa crus-galli (L.) P. Beauv.) as affected by methanol foliar application.

    Science.gov (United States)

    Rezaeieh, Alireza D; Aminpanah, Hashem; Sadeghi, Seyed M

    2015-01-01

    Pot experiment was conducted in Iran, to evaluate the effect of methanol on competition between rice (Oryza sativa) and barnyardgrass (Echinochloa crus-galli). The experiment was conducted as a randomized complete block design with a factorial treatment arrangement and three replicates. Factors were two aqueous methanol foliar applications (0, and 14% v/v) and five rice: barnyardgrass ratios (100:0, 75:25, 50:50, 25:6, and 0:100). Replacement series diagrams for aboveground dry weight illustrated that 'Shiroudi' was more competitive than barnyardgrass as averaged across methanol foliar applications. When methanol was not sprayed, the lines for 'Shiroudi' and barnyardgrass intersected at 75:25 rice: barnyardgrass ratio, but when methanol was sprayed at 14% v/v, the lines for 'Shiroudi' and barnyardgrass intersect at the left of the 75:25 rice: barnyardgrass mixture proportion. These indicate that methanol application reduced competitive ability of 'Shiroudi' against barnyardgrass for aboveground biomass accumulation. At the same time, Methanol foliar application significantly reduced the relative crowding coefficient of 'Shiroudi' while simultaneously it significantly increased the relative crowding coefficient of barnyard grass. This indicates that methanol foliar application reduced the competitive ability of 'Shiroudi' against barnyardgrass for shoot biomass accumulation. This experiment illustrated that foliar spray of aqueous methanol can not be recommended for rice under weedy conditions.

  11. Metabolite profiling of the short-term responses of rice leaves (Oryza sativa cv. Ilmi) cultivated under different LED lights and its correlations with antioxidant activities.

    Science.gov (United States)

    Jung, Eun Sung; Lee, Sarah; Lim, Sun-Hyung; Ha, Sun-Hwa; Liu, Kwang-Hyeon; Lee, Choong Hwan

    2013-09-01

    Metabolite profiling of rice leaves (Oryza sativa cv. Ilmi) was performed to investigate the short-term responses to different light-emitting diode (LED) lights, blue (B), green (G), red (R), white (W), shade (S), by using gas chromatography-ion trap-mass spectrometry (GC-IT-MS) and ultra-performance liquid chromatography-quadrupole-time-of-flight-mass spectrometry (UPLC-Q-TOF-MS) with multivariate analysis. Clear grouping patterns of each light-grown sample, except G and W, were shown in partial least squares-discriminant analysis (PLS-DA). Thirty-two primary metabolites and eleven secondary metabolites were selected and visualized using heatmap. Antioxidant activities of rice leaves followed the order B=W=G>R>S and isoorientin-2''-O-glucoside, isovitexin-2''-O-glucoside, isoorientin-2''-O-(6'''-ρ-coumaroyl)-glucoside, and isoscoparin-2''-O-glucoside showed similar relative differences and had higher Pearson's correlation coefficients than other metabolites in correlation network. According to the orthogonal projection to latent structures-discriminant analysis (OPLS-DA) between B and R, the levels of amino acids, organic acids, fatty acids, and flavonoid glycosides were relatively high in B, whereas the glucose and fructose levels were high in R.

  12. Detection of Distorted Segregation in Genotype of Pollen Calli Derived from Hybrid F1 of Cultivated Rice (Oryza sativa L.) Using SSR Markers

    Institute of Scientific and Technical Information of China (English)

    YAO Yan; LU Yong-gen; LIU Xiang-dong; FENG Jiu-huan; ZHANG Gui-quan

    2006-01-01

    S-a, S-b and S-c are three loci for F1 pollen sterility in cultivated rice (Oryza sativa L.). Taichung 65 (T65) is all Sj/Sj at these three loci, while its F1 pollen sterile near-isogenic lines, TISL2 (S-b), TISL4 (S-a) and TISL5 (S-c) is Si/Si according to their respective sterility locus. Using SSR molecular marker to detect the segregation of the allele Si and Sj in pollen calli population induced from different hybrid F1, which have different pollen sterility locus, showed that the segregation of allele Si and Sj was distorted. The distorted direction of pollen calli population in vitro was not the same as F2 population in vivo. The quantities of pollen callus carrying Sj were much more than that of carrying Si at S-a and S-c locus, the ratio of Si and Sj were 1:4.81 and 1:1.96 respectively. But the opposite tendency was observed at S-b locus, the ratio of Si and Sj being 1:0.35. At the same time, all these results were undisturbed by either culture medium or culture period.

  13. Photochemical properties in flag leaves of a super-high-yielding hybrid rice and a traditional hybrid rice (Oryza sativa L.) probed by chlorophyll a fluorescence transient.

    Science.gov (United States)

    Zhang, Meiping; Shan, YongJie; Kochian, Leon; Strasser, Reto J; Chen, GuoXiang

    2015-12-01

    Chlorophyll a fluorescence of flag leaves in a super-high-yielding hybrid rice (Oryza sativa L.) LYPJ, and a traditional hybrid rice SY63 cultivar with lower grain yield, which were grown in the field, were investigated from emergence through senescence of flag leaves. As the flag leaf matured, there was an increasing trend in photosynthetic parameters such as quantum efficiency of primary photochemistry ([Formula: see text] Po) and efficiency of electron transport from PS II to PS I (Ψ Eo). The overall photosynthetic performance index (PIABS) was significantly higher in the high-yielding LYPJ compared to SY63 during the entire reproductive stage of the plant, the same to MDA content. However, [Formula: see text] Po(=F V/F M), an indicator of the primary photochemistry of the flag leaf, did not display significant changes with leaf age and was not significantly different between the two cultivars, suggesting that PIABS is a more sensitive parameter than [Formula: see text] Po (=F V/F M) during leaf age for distinguishing between cultivars differing in yield.

  14. Identifikasi Transgene pada Tanaman Padi (oryza sativa var. koshihikari yang Ditransformasi dengan Bantuan Agrobacterium tumefaciens, Menggunakan Metode Tanpa Teknik Kultur Jaringan.

    Directory of Open Access Journals (Sweden)

    I Putu Suparthana

    2015-04-01

    Full Text Available Metode transformasi tanaman dengan bantuan Agrobacterium tumefaciens biasa dilakukan dengan melibatkan teknik kultur jaringan, akan tetapi teknik kultur jaringan memiliki beberapa kelemahan yaitu memerlukan suatu kondisi steril, memakan banyak waktu, sering terjadi mutasi dalam proses kultur in vitro dan sejumlah tanaman bersifat rekalsitran pada tahap regenerasi. Disisi lain metode baru (in planta transformation system yang dikembangkan dalam penelitian ini mampu mengatasi kelemahan-kelemahan tersebut. Penelitian dilakukan pada tanaman padi dengan bantuan A. tumefaciens sebagai inokulum namun tidak melibatkan teknik kultur jaringan pada masa regenerasinya. Biji padi (Oryza sativa L. var. Koshihikari direndam dalam air selama 2 hari, dengan demikian embrionya yang mengandung sel apikal meristem dapat diinokulasi dengan cara menusukkan jarum yang telah dicelupkan dalam inokulum. Biji padi yang telah diinokulasi selanjutnya ditumbuhkan dilapangan selayaknya pembenihan biasa tanpa perlakuan steril. Untuk menentukan keberhasilan teknik ini, dua jenis strain mutan A. tumefaciens (M-21 dan LBA4404 digunakan dalam transformasi. Mutan M-21 mengandung Tn5 tersisip dalam gen iaaM dan mutan LBA4404 membawa binari plasmid vektor. Transgen dari mutan M-21 dapat diidentifikasi dari perubahan fenotipe pada tanaman padi transgenik sedangkan dari mutan LBA4404 dapat diidentifikasi dengan uji histokimia dan ketahanan terhadap antibitik (hygromycin B.Kata kunci: in planta transformation, A. tumefaciens, transformation method

  15. Effect of atmospheric mercury deposition on selenium accumulation in rice (Oryza sativa L.) at a mercury mining region in southwestern China.

    Science.gov (United States)

    Zhang, Chao; Qiu, Guangle; Anderson, Christopher W N; Zhang, Hua; Meng, Bo; Liang, Liang; Feng, Xinbin

    2015-03-17

    Selenium (Se) is an important trace element for human nutrition and has an interactive effect on mercury (Hg) uptake by plants and Hg toxicity in animals. Rice (Oryza sativa L.) is the dominant source of dietary Se in China, however the effect of soil Hg contamination on the Se concentration in rice is unknown. We collected 29 whole rice plant samples and corresponding soils from an active artisanal mercury mining area and an abandoned commercial mercury mining area. The soil Se concentration was similar across the two mining areas and greater than the background concentration for China. However, the Se concentration in rice grain was dramatically different (artisanal area 51±3 ng g(-1); abandoned area 235±99 ng g(-1)). The total gaseous mercury (TGM) concentration in ambient air at the artisanal mining site was significantly greater than at the abandoned area (231 and 34 ng m(-3), respectively) and we found a negative correlation between TGM and the Se concentration in grain for the artisanal area. Principal component analysis indicated that the source of Se in rice was the atmosphere for the artisanal area (no contribution from soil), and both the atmosphere and soil for the abandoned area. We propose that TGM falls to soil and reacts with Se, inhibiting the translocation of Se to rice grain. Our data suggest that Se intake by the artisanal mining community is insufficient to meet Se dietary requirements, predisposing this community to greater risk from Hg poisoning.

  16. Integration of crop rotation and arbuscular mycorrhiza (AM) inoculum application for enhancing AM activity to improve phosphorus nutrition and yield of upland rice (Oryza sativa L.).

    Science.gov (United States)

    Maiti, Dipankar; Toppo, Neha Nancy; Variar, Mukund

    2011-11-01

    Upland rice (Oryza sativa L.) is a major crop of Eastern India grown during the wet season (June/July to September/October). Aerobic soils of the upland rice system, which are acidic and inherently phosphorus (P) limiting, support native arbuscular mycorrhizal (AM) activity. Attempts were made to improve P nutrition of upland rice by exploiting this natural situation through different crop rotations and application of AM fungal (AMF) inoculum. The effect of a 2-year crop rotation of maize (Zea mays L.) followed by horse gram (Dolichos biflorus L.) in the first year and upland rice in the second year on native AM activity was compared to three existing systems, with and without application of a soil-root-based inoculum. Integration of AM fungal inoculation with the maize-horse gram rotation had synergistic/additive effects in terms of AMF colonization (+22.7 to +42.7%), plant P acquisition (+11.2 to +23.7%), and grain yield of rice variety Vandana (+25.7 to +34.3%).

  17. N-glycan containing a core α1,3-fucose residue is required for basipetal auxin transport and gravitropic response in rice (Oryza sativa).

    Science.gov (United States)

    Harmoko, Rikno; Yoo, Jae Yong; Ko, Ki Seong; Ramasamy, Nirmal Kumar; Hwang, Bo Young; Lee, Eun Ji; Kim, Ho Soo; Lee, Kyung Jin; Oh, Doo-Byoung; Kim, Dool-Yi; Lee, Sanghun; Li, Yang; Lee, Sang Yeol; Lee, Kyun Oh

    2016-10-01

    In plants, α1,3-fucosyltransferase (FucT) catalyzes the transfer of fucose from GDP-fucose to asparagine-linked GlcNAc of the N-glycan core in the medial Golgi. To explore the physiological significance of this processing, we isolated two Oryza sativa (rice) mutants (fuct-1 and fuct-2) with loss of FucT function. Biochemical analyses of the N-glycan structure confirmed that α1,3-fucose is missing from the N-glycans of allelic fuct-1 and fuct-2. Compared with the wild-type cv Kitaake, fuct-1 displayed a larger tiller angle, shorter internode and panicle lengths, and decreased grain filling as well as an increase in chalky grains with abnormal shape. The mutant allele fuct-2 gave rise to similar developmental abnormalities, although they were milder than those of fuct-1. Restoration of a normal tiller angle in fuct-1 by complementation demonstrated that the phenotype is caused by the loss of FucT function. Both fuct-1 and fuct-2 plants exhibited reduced gravitropic responses. Expression of the genes involved in tiller and leaf angle control was also affected in the mutants. We demonstrate that reduced basipetal auxin transport and low auxin accumulation at the base of the shoot in fuct-1 account for both the reduced gravitropic response and the increased tiller angle.

  18. High-quality reference genes for quantifying the transcriptional responses of Oryza sativa L.(ssp.indica and japonica) to abiotic stress conditions

    Institute of Scientific and Technical Information of China (English)

    MAKSUP Sarunyaporn; SUPAIBULWATANA Kanyaratt; SELVARAJ Gopalan

    2013-01-01

    Rice (Oryza sativa L.) is important to food security and is also an excellent model plant for numerous cereal crops.A functional genomics study in rice includes characterization of the expression dynamics of genes by quantitative real-time PCR (qPCR) analysis; this is a significant key for developing rice varieties that perform well in the face of adverse climate change.The qPCR analysis requires the use of appropriate reference genes in order to make any quantitative interpretations meaningful.Here,the new potential reference genes were selected from a huge public database of rice microarray experiments.The expression stability of 14 candidates and 4 conventional reference genes was validated by geNormPLUs and NormFinder software.Seven candidates are superior to the conventionally used reference genes in qPCR and three genes can be used reliably for quantitating the expression of genes involved in abiotic stress responses.These high-quality references EP (LOC_Os05g08980),HNR (LOC_Os01g71770),and TBC (LOC_Os09g34040) worked very well in three indica genotypes and one japonica genotype.One of indica genotypes including the Jasmine rice,KDML105 developed in Thailand for which no reference genes have been reported until now.

  19. Thirty-three years of 2-acetyl-1-pyrroline, a principal basmati aroma compound in scented rice (Oryza sativa L.): a status review.

    Science.gov (United States)

    Wakte, Kantilal; Zanan, Rahul; Hinge, Vidya; Khandagale, Kiran; Nadaf, Altafhusain; Henry, Robert

    2017-01-01

    Rice is the staple food of around 3 billion people, most of them in Asia which accounts for 90% of global rice consumption. Aromatic rices have been preferred over non-aromatic rice for hundreds of years. They have a premium value in national as well as international market owing to their unique aroma and quality. Many researchers were involved in identifying the compound responsible for the pleasant aroma in aromatic rice in the 20th century. However, due to its unstable nature, 2-acetyl-1-pyrroline (2AP) was discovered very late, in 1982. Buttery and co-workers found 2AP to be the principal compound imparting the pleasant aroma to basmati and other scented rice varieties. Since then, 2AP has been identified in all fragrant rice (Oryza sativa L.) varieties and a wide range of plants, animals, fungi, bacteria and various food products. The present article reviews in detail biochemical and genetic aspects of 2AP in living systems. The site of synthesis, site of storage and stability in plant systems in vivo is of interest. This compound requires more research on stability to facilitate use as a food additive. © 2016 Society of Chemical Industry.

  20. Genetic diversity and population structure of 'Khao Kai Noi', a Lao rice (Oryza sativa L.) landrace, revealed by microsatellite DNA markers.

    Science.gov (United States)

    Vilayheuang, Koukham; Machida-Hirano, Ryoko; Bounphanousay, Chay; Watanabe, Kazuo N

    2016-03-01

    Rice (Oryza sativa L.) is the main food for people in Laos, where it has been grown and eaten since prehistory. Diverse landraces are grown in Laos. 'Khao Kai Noi', a landrace favored for its eating quality, is held in the nationwide collection of traditional landraces in the Lao national genebank. Genetic diversity is crucial for sustainable use of genetic resources and conservation. To investigate the genetic diversity of 'Khao Kai Noi' for conservation, we genotyped 70 accessions by using 23 polymorphic simple sequence repeat markers. The markers generated 2 to 17 alleles (132 in total), with an average of 5.7 per locus. The total expected heterozygosity over all 'Khao Kai Noi' accessions was 0.271. Genetic variation was largest among accessions and smallest within accessions. Khao Kai Noi accessions were classified into three different genetic backgrounds, but there was unclear association between the three inferred population and name subgroups and geographical distribution. Most of the accessions were clustered with temperate japonica and showed genetic relatedness to rice from neighboring provinces of Vietnam, suggesting a Vietnamese origin. The results of this study will contribute to the conservation, core collection and future breeding of the Khao Kai Noi population.

  1. Heavy Metals in Brown Rice (Oryza sativa L.) and Soil After Long-Term Irrigation of Wastewater Discharged from Domestic Sewage Treatment Plants

    Institute of Scientific and Technical Information of China (English)

    B. Y. CHUNG; C. H. SONG; B. J. PARK; J. Y. CHO

    2011-01-01

    A pot experiment was conducted in a plastic film house to evaluate the translocation and uptake of heavy metals (Pb,Cd,Cu,and Zn) into brown rice (Oryza sativa L.) and the heavy metals residues in soils which had previously been irrigated with domestic wastewater for a long time (3 years).The range of Pb,Cd,Cu,and Zn was 5.10 ± 0.01,0.105 ± 0.017,5.76 ± 0.42,and 23.56 ± 1.40 mg kg-1,respectively in the domestic wastewater-irrigated soil,and 0.370 ± 0.006,0.011 ±0.001,0.340 ± 0.04,and 2.05 ± 0.18 mg kg-1,respectively,in the domestic wastewater-irrigated brown rice.The results indicated that application of domestic wastewater to arable land slightly increased the levels of Pb,Cd,Cu,and Zn in soil and brown rice (P < 0.01).The concentrations of heavy metals in brown rice were lower than the recommended tolerable levels proposed by the Joint FAO/WHO Expert Committee on Food Additives.However,the continuous monitoring and pollution control of hazardous materials from domestic wastewater are needed in order to prevent excessive build-up of heavy metals in the food chain.

  2. Uptake of Total Petroleum Hydrocarbon (TPH) and Polycyclic Aromatic Hydrocarbons (PAHs) by Oryza sativa L. Grown in Soil Contaminated with Crude Oil.

    Science.gov (United States)

    Patowary, Rupshikha; Patowary, Kaustuvmani; Devi, Arundhuti; Kalita, Mohan Chandra; Deka, Suresh

    2017-01-01

    The purpose of this study was to determine whether total petroleum hydrocarbon (TPH) and polycyclic aromatic hydrocarbons (PAHs) present in crude oil contaminated sites are transferred to roots, shoots and finally the grains of rice crops (Oryza sativa L.) grown in those sites. Soil was artificially contaminated with crude oil at concentrations of 0, 1000, 5000, 10,000, and 15,000 mg/kg, followed by planting of rice seedlings. After harvest, TPH in plant samples were measured, and it was determined that the uptake of TPH by the plants gradually increased as the concentration of oil in soil increased. Further, from GC-MS analysis, it was observed that PAHs including naphthalene and phenanthrene bioaccumulated in rice plant parts. Vital physico-chemical properties of soil were also altered due to crude oil contamination. Our study revealed that rice plants grown in crude oil polluted sites can uptake TPH including PAHs, thus emphasising the importance of prior investigation of soil condition before cultivation of crops.

  3. Characterization of native strains of Azospirillum spp. and its effect on growth of Oryza sativa L. “rice” in Lambayeque

    Directory of Open Access Journals (Sweden)

    Franklin García

    2010-06-01

    Full Text Available This research was conducted to characterize and determine the effect of native strains of Azospirillum spp. on growth of Oryza sativa L. "rice" as an alternative for the reduction of chemical fertilizers. The bacteria were isolated from roots of rice in Lambayeque. Fragments of previously disinfected roots were planted in Nfb semisolid medium, were nitrogen-fixing bacteria were recognized by a whitish film on the surface and turn from green to blue. The genus Azospirillum was identified in Congo red agar medium, obtained 96 isolates with production of 2.69 to 38.02 ppm indoleacetic acid and 7.95 to 29.09 ppm of fixed nitrogen. The four strains with the highest values were inoculated independently and in combination with 50 and 100 % urea in Tinajones INIA508 rice. It used a completely randomized design and including witnesses’ 50 and 100 % urea and absolute control. All native strains increased height and dry matter of shoot and roots, with effectiveness index of up to 21.77, 102.06 and 126.11 % compared to untreated control. Azospirillum sp. GM-86 selected by the highest value of indoleacetic acid, reached the highest level of effectiveness in height and root dry biomass. The application of 50 % úrea with Azospirillum spp. increased rates of effectiveness. It demonstrated the potential of native strains of Azospirillum spp. to increase the growth of rice as well as the possibility to use associate with low doses of urea.

  4. Novel roles of hydrogen peroxide (H₂O₂) in regulating pectin synthesis and demethylesterification in the cell wall of rice (Oryza sativa) root tips.

    Science.gov (United States)

    Xiong, Jie; Yang, Yongjie; Fu, Guanfu; Tao, Longxing

    2015-04-01

    Hydrogen peroxide (H₂O₂) has been reported to increase lignin formation, enhance cell wall rigidification, restrict cell expansion and inhibit root elongation. However, our results showed that it not only inhibited rice (Oryza sativa) root elongation, but also increased root diameter. No study has reported how and why H₂O₂ increases cell expansion and root diameter. Exogenous H₂O₂ and its scavenger 4-hydroxy-Tempo were applied to confirm the roles of H₂O₂. Immunofluorescence, fluorescence probe, ruthenium red staining, histological section and spectrophotometry were used to monitor changes in the degree of pectin methylesterification, pectin content, pectin methylesterase (PME) activity and H₂O₂ content. Exogenous H₂O₂ inhibited root elongation, but increased cell expansion and root diameter significantly. H₂O₂ not only increased the region of pectin synthesis and pectin content in root tips, but also increased PME activity and pectin demethylesterification. The scavenger 4-hydroxy-Tempo reduced root H₂O₂ content and recovered H₂O₂-induced increases in cell expansion and root diameter by inhibiting pectin synthesis, PME activity and pectin demethylesterification. H₂O₂ plays a novel role in the regulation of pectin synthesis, PME activity and pectin demethylesterification. H₂O₂ increases cell expansion and root diameter by increasing pectin content and demethylesterification.

  5. Stress-resistance of weedy rice Luolijing (Oryza sativa )%杂草稻落粒粳的抗逆境特性研究

    Institute of Scientific and Technical Information of China (English)

    余柳青; A.Martin Mortimer; 玄松南; 陆永良; 周勇军

    2005-01-01

    杂草稻落粒粳(Oryza sativa)发生在我国辽宁丹东.落粒粳植株明显高于当地大多数栽培品种,颖果呈中长型,成熟后容易掉粒;果壳稻草色或黄间黑灰色,小穗无芒或有芒,芒长4~12 cm;颖果千粒重2.35 g,种皮桔红色.落粒粳种子在13~38℃条件下的发芽率均大于88%,水层2.5~10 cm处理,落粒粳植株干重减少50%~69%.在幼苗期,落粒粳对无芒稗的各项影响因子均明显大于化感潜力品种I-kung-pao,表明落粒粳无化感作用.落粒粳可以忍耐0.5%的盐碱.

  6. Correlation and quantitative trait loci analyses of total chlorophyll content and photosynthetic rate of rice (Oryza sativa) under water stress and well-watered conditions.

    Science.gov (United States)

    Hu, Song-Ping; Zhou, Ying; Zhang, Lin; Zhu, Xiu-Dong; Li, Lin; Luo, Li-Jun; Liu, Guo-Lan; Zhou, Qing-Ming

    2009-09-01

    In order to explore the relevant molecular genetic mechanisms of photosynthetic rate (PR) and chlorophyll content (CC) in rice (Oryza sativa L.), we conducted a series of related experiments using a population of recombinant inbred lines (Zhenshan97B x IRAT109). We found a significant correlation between CC and PR (R= 0.19**) in well-watered conditions, but no significant correlation during water stress (r= 0.08). We detected 13 main quantitative trait loci (QTLs) located on chromosomes 1, 2, 3, 4, 5, 6, and 10, which were associated with CC, including six QTLs located on chromosomes 1, 2, 3, 4, and 5 during water stress, and seven QTLs located on chromosomes 2, 3, 4, 6, and 10 in well-watered conditions. These QTLs explained 47.39% of phenotypic variation during water stress and 56.19% in well-watered conditions. We detected four main QTLs associated with PR; three of them (qPR2, qPR10, qPR11) were located on chromosomes 2, 10, and 11 during water stress, and one (qPR10) was located on chromosome 10 in well-watered conditions. These QTLs explained 34.37% and 18.41% of the phenotypic variation in water stress and well-watered conditions, respectively. In total, CC was largely controlled by main QTLs, and PR was mainly controlled by epistatic QTL pairs.

  7. Risk Assessment of Heavy Metals Contamination in Paddy Soil, Plants, and Grains (Oryza sativa L. at the East Coast of India

    Directory of Open Access Journals (Sweden)

    Deepmala Satpathy

    2014-01-01

    Full Text Available Heavy metals known to be accumulated in plants adversely affect human health. This study aims to assess the effects of agrochemicals especially chemical fertilizers applied in paddy fields, which release potential toxic heavy metals into soil. Those heavy metals get accumulated in different parts of paddy plant (Oryza sativa L. including the grains. Concentrations of nonessential toxic heavy metals (Cd, Cr, and Pb and the micronutrients (Cu, Mn, and Zn were measured in the paddy field soil and plant parts. Mn and Cd are found to be accumulated more in shoot than in root. The metal transfer factors from soil to rice plant were significant for Pb, Cd, Cu, Cr, Mn, and Zn. The ranking order of bioaccumulation factor (BAF for heavy metals was Zn > Mn > Cd > Cu > Cr > Pb indicating that the accumulation of micronutrients was more than that of nonessential toxic heavy metals. The concentrations of heavy metals were found to be higher in paddy field soils than that of the nearby control soil but below permissible limits. The higher Health Index (HI values of rice consuming adults (1.561 and children (1.360 suggest their adverse health effects in the near future.

  8. Production of oleic acid ethyl ester catalyzed by crude rice bran (Oryza sativa lipase in a modified fed-batch system: problem and its solution

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    Indro Prastowo

    2015-01-01

    Full Text Available A fed-batch system was modified for the enzymatic production of Oleic Acid Ethyl Ester (OAEE using rice bran (Oryza sativa lipase by retaining the substrate molar ratio (ethanol/oleic acid at 2.05: 1 during the reaction. It resulted in an increase in the ester conversion up to 76.8% in the first 6 h of the reaction, and then followed by a decrease from 76.8% to 22.9% in 6 h later. Meanwhile, the production of water in the reaction system also showed a similar trend to the trend of ester production. The water was hypothesized to lead lipase to reverse the reaction which resulted in a decrease in both (water and esters in the last 6 h of the reaction. In order to overcome the problem, zeolite powders (25 and 50 mg/ml were added into the reaction system at 5 h of the reaction. As the result, final ester conversions increased drastically up to 90 - 95.7% (1.17 – 1.24 times. The addition also proved a hypothesis that the water was involved in reducing the ester conversion in the last 6 h of the reaction. Thus, the combination was effective to produce the high final ester conversion.

  9. Polyhydroxyalcanoates of strains of Azospirillum spp. isolated of roots of Lycopersicon esculentum Mill. “tomato” and Oryza sativa L. “rice” in Lambayeque

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    Katty Baca

    2010-12-01

    Full Text Available In this work was determined the concentration of polyhydroxyalkanoates (PHAs of Azospirillum strains isolated from roots of Lycopersicon esculentum Mill "tomato" and Oryza sativa L. "rice" as an alternative to accumulation of petroleum-based plastics. Previously disinfected root were plated in Nfb semisolid medium where nitrogen-fixing bacteria were recognized by a whitish film on the surface and turn from green to blue. The genus Azospirillum was identified in Congo red agar medium, obtained 96 isolates of A. lipoferum and A. brasilense on tomato and rice. Batch fermentation was performed with broth Azotobacter modified feeding a saturated solution of malic acid every 12 hours and were stained with Sudan Black B. Strains were selected with the greatest number of PHAs granules (in tomato, 18 of A. lipoferum and 2 of A. brasilense; in rice, 10 of A. lipoferum and 10 of A. brasilense and quantified the biomass and PHAs. PHAs concentration reached 0.661 gL-1 in A. lipoferum KM(T-73 and 0.738 gL-1 in A. brasilense KM(T-19, both isolated from tomato. Strains of A. lipoferum and A. brasilense isolated from tomato reached a higher concentration of biomass and PHAs against the strains of rice.

  10. Identification of a novel mitochondrial protein, short postembryonic roots 1 (SPR1), involved in root development and iron homeostasis in Oryza sativa.

    Science.gov (United States)

    Jia, Liqiang; Wu, Zhongchang; Hao, Xi; Carrie, Chris; Zheng, Libin; Whelan, James; Wu, Yunrong; Wang, Shoufeng; Wu, Ping; Mao, Chuanzao

    2011-02-01

    • A rice mutant, Oryza sativa short postembryonic roots 1 (Osspr1), has been characterized. It has short postembryonic roots, including adventitious and lateral roots, and a lower iron content in its leaves. • OsSPR1 was identified by map-based cloning. It encodes a novel mitochondrial protein with the Armadillo-like repeat domain. • Osspr1 mutants exhibited decreased root cell elongation. The iron content of the mutant shoots was significantly altered compared with that of wild-type shoots. A similar pattern of alteration of manganese and zinc concentrations in shoots was also observed. Complementation of the mutant confirmed that OsSPR1 is involved in post-embryonic root elongation and iron homeostasis in rice. OsSPR1 was found to be ubiquitously expressed in various tissues throughout the plant. The transcript abundance of various genes involved in iron uptake and signaling via both strategies I and II was similar in roots of wild-type and mutant plants, but was higher in the leaves of mutant plants. • Thus, a novel mitochondrial protein that is involved in root elongation and plays a role in metal ion homeostasis has been identified.

  11. The defense-responsive genes showing enhanced and repressed expression after pathogen infection in rice (Oryza sativa L.)

    Institute of Scientific and Technical Information of China (English)

    周斌; 彭开蔓; 储昭晖; 王石平; 张启发

    2002-01-01

    Despite large numbers of studies about defense response, processes involved in the resistance of plants to incompatible pathogens are still largely uncharacterized. The objective of this study was to identify genes involved in defense response by cDNA array analysis and to gain knowledge about the functions of the genes involved in defense response. Approximately 20000 rice cDNA clones were arrayed on nylon filters. RNA samples isolated from different rice lines after infection with incompatible strains or isolates of Xanthomonas oryzae pv. oryzae or Pyricularia grisea, respectively, were used to synthesize cDNA as probes for screening the cDNA arrays. A total of 100 differentially expressed unique sequences were identified from 5 pathogen-host combinations. Fifty-three sequences were detected as showing enhanced expression and 47 sequences were detected as showing repressed expression after pathogen infection. Sequence analysis revealed that most of the 100 sequences had various degrees of homology with genes in databases which encode or putatively encode transcription regulating proteins, translation regulating proteins, transport proteins, kinases, metabolic enzymes, and proteins involved in other functions. Most of the genes have not been previously reported as being involved in the disease resistance response in rice. The results from cDNA arrays, reverse transcription-polymerase chain reaction, and RNA gel blot analysis suggest that activation or repression of most of these genes might occur commonly in the defense response.

  12. Caracterização isoenzimática de genótipos de arroz Isoenzymatic characterization of rice genotypes

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    Sandro Bonow

    2001-02-01

    Full Text Available Objetivou-se, neste trabalho, caracterizar isoenzimaticamente genótipos de arroz (Oryza sativa L.. A produtividade do arroz irrigado no Rio Grande do Sul é elevada, em virtude da alta tecnologia e sistema de irrigação usados, associados ao potencial alcançado pelas cultivares desenvolvidas através de melhoramento genético. Apenas seis ancestrais contribuem com 86% dos genes das cultivares mais plantadas. Como conseqüência desta estreita base genética, as cultivares apresentam um alto grau de parentesco e de similaridade de suas características morfológicas e agronômicas, o que dificulta a identificação varietal. A concorrência com genótipos, como arroz-vermelho e arroz-preto, de difícil controle por serem da mesma espécie que os cultivados, é considerada como um dos maiores problemas da cultura. Análises de isoenzimas podem ser usadas para o estudo da variabilidade e para estimar as relações genéticas existentes entre estes genótipos. Eletroforese em gel de poliacrilamida foi empregada, portanto, para caracterizar, através de isoenzimas de esterase, 6fosfogluconato desidrogenase, fosfoglucoisomerase e isocitrato desidrogenase em sementes e folhas de plântulas, e de fosfatase ácida e aspartato transaminase em folhas de plântulas, as cultivares BR-IRGA 409, BR-IRGA 410, BRS 6 ('Chuí', BRS 7 ('Taim', BRS Agrisul, INIA Taquari, El Paso L 144 e IRGA 417, e ecótipos de arroz-vermelho e arroz-preto. A análise de agrupamento, efetuada por meio do coeficiente de Jaccard e pelo método da média aritmética não ponderada (UPGMA, possibilitou a diferenciação de todos os genótipos, à exceção de BRS 6 ('Chuí' e BRS 7 ('Taim'. Três grupos foram identificados, incluindo-se, em um deles, os ecótipos de arroz-vermelho e arroz-preto, que apresentaram 95% de similaridade.The objective of this work was to characterize isoenzymaticly rice (Oryza sativa L. genotypes. Rice yields obtained in Rio Grande do Sul, Brazil, are high

  13. Splicing-site recognition of rice (Oryza sativa L. ) DNA sequences by support vector machines

    Institute of Scientific and Technical Information of China (English)

    彭司华; 彭小宁; 庄树林; 杜维; 陈良标

    2003-01-01

    Motivation: It was found that high accuracy splicing-site recognition of rice ( Oryza satlva L. ) DNA sequence is especially difficult. We described a new method for the splicing-site recognition of rice DNA sequences. Method: Based on the intron in eukaryotic organisms conforming to the principle of GT-AG, we used support vector machines (SVM) to predict the splicing sites. By machine learning, we built a model and used it to test the effect of the test data set of true and pseudo splicing sites. Results : The prediction accuracy we obtained was 87.53% at the true 5' end splicing site and 87.37% at the true 3' end splicing sites. The results suggested that the SVM approach could achieve higher accuracy than the previous approaches.

  14. EVALUACIÓN DE CEPAS NATIVAS DEL GÉNERO Azospirillum Y SU INTERACCIÓN CON EL CULTIVO DEL ARROZ

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    Mabel Pazos

    2001-01-01

    Full Text Available Catorce cepas nativas pertenecientes a la especie Azospirillum brasilense se caracterizaron en cuanto a su ca- pacidad de fijar el nitrógeno atmosférico. Se estudió su efecto en el cultivo del arroz (Oryza sativa, mediante el modelo Microcosmos, realizando determinaciones de la altura de las plantas inoculadas, masa fresca de la raíz y el contenido de fenoles libres y la cuantificación de proteínas en las hojas. Se observó en todos los casos un efecto positivo por la inocula- ción con estas rizobacterias, donde se destaca la cepa R5(15 con los mayores incrementos en los indicadores estudiados.

  15. Análisis de Factores en la Evaluación de una Sembradora al Voleo para el Cultivo de Arroz (Oriza Sativa

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    Puyana M. J. Octavio

    1980-09-01

    Full Text Available En los terrenos de la Universidad Nacional, Sede de Medellín, Facultad de Agronomía, se realizó una calibración estadística de un equipo de siembra fertilización, de enganche hidráulico y aplicación al voleo mediante transmisión de potencia del toma de fuerza (tdf por rueda de fricción (Equipo APOLO SAV 73. Las pruebas se efectuaron en los años 1976 y 1977. Se utilizó semilla de arroz de las variedades CICA 4 Y CICA 6. Se diseñó un experimento factorial para observar los perfiles transversales de la deposición de la semilla, habiéndose recogido en lienzos de 0.50 x 0.50 mts2, distanciados a 2.5 metros, á partir del centro de la vía del tractor y perpendiculares a ella, a ambos lados, para cubrir una distancia total, transversal, de 15 metros. Se recogieron cuatro repeticiones que se tomaron en bloques distanciados tres metros (sobre el eje de recorrido del tractor. Se tomó como variable dependiente, el número de semillas/lienzo, fácilmente convertible, en los cálculos, a kqrms/ Ha. Como variables independientes se observaron: apertura de la salida de la tolva al plato de distribución (Q1 = 16.08 cm.2, Q2 =42.30 cm2 , Q3 = 73.50 cm.2; altura de toma de fuerza (H1 = 0.78 m., H2 = 0.90 m., H3 = 0.70 m.; posición de la aleta del plato distribuidor (P1 = 0°, P2 -= 13.08°, P3 = 18.27° y la distancia transversal del perfil (D 1 =0 metros, D2 =2.5 metros, D3 =5.0 metros, D4 = 7.5 metros, D5= 10.0 metros; esta última se conformó así para facilitar el ajuste de curvas, mas, sin embargo, corresponde al perfil transversal con centro en D3 =5.0 metros = 0 (Centro del tractor; el semi-perfil izquierdo (D2 = -2.5 metros, D1= -5.0 metros y el semi-perfil derecho (D4 = +2.5 metros, D5 = +5.0 metros; velocidad de operación (V 1 = 4.54 KPH, V2 = 6.18 KPH, V3 = 9.68 KPH. Se tuvieron 405 tratamientos y un total de 1.620 muestras. Se efectuaron análisis de Varianza, pruebas de DUNCAN y análisis de regresión múltiple, en una

  16. A simple method for purification of deodorizer distillate from Indian rice (Oryza Sativa bran oil and preparation of phytosterols

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    Raja Rajan, R. G.

    2014-12-01

    Full Text Available Samples of rice bran oil deodorizer distillates (RBO DOD-1 and RBO DOD-2 were studied for their physicochemical characteristics. The samples were semisolid and had a dark color. The free fatty acid values were 59.2% and 86.0%, the unsaponifiable matter was 18.7% and 7.75% and the phytosterol contents were 8.71% and 4.22%, respectively for the deodorizer distillates studied. A simple method of silica gel percolation was developed to purify DOD to obtain phytosterol concentrate fractions (PCF and a brown color and bad odor fraction (BCBOF. The color values were reduced by 72.8% and 73.0% of lovibond units in the PCF for DOD-1 and DOD-2 respectively, had no bad odor and were increased in the phytosterol concentration to 12.4% and 5.9%. The PCF was further processed to prepare high purity phytosterols. An HPLC analysis of the phytosterol mixture showed it to be formed by β-sitosterol (38.2%, stigmasterol (34.9%, campesterol (9.5% and other sterols (17.4%.Se estudiaron las características físico-químicas de muestras de destilados de desodorización de aceites de salvado de arroz (RBO DOD-1 y RBO DOD-2. Las muestras eran semi-sólidas y tenían un color oscuro. Los valores de ácidos grasos libres fueron 59,2% y 86,0%, materia insaponificable 18,7% y 7,75% y contenido de fitoesteroles de 8,71% y 4,22%, respectivamente, para los destilados de desodorización estudiados. Se desarrolló un método simple de filtración mediante sílica gel para purificar DOD y obtener concentrados de fitosteroles (PCF y una fracción de color marrón y olor desagradable (BCBOF. Los valores de color se redujeron en un 72,8% y el 73,0% de unidades Lovibond en el PCF para DOD-1 y DOD-2, respectivamente, no tenían mal olor y aumentaron su concentración en fitoesteroles al 12,4% y 5,9%. El PCF se procesó adicionalmente para preparar fitosteroles de alta pureza. El análisis por HPLC mostró que la mezcla de fitosteroles estaba formada por β-sitosterol (38

  17. Effect of land preparation methods on growth, seed yields of Jasmine 105 paddy rice (Oryza sativa L.) and growth of weeds, grown in Northeast Thailand.

    Science.gov (United States)

    Srisa-Ard, K

    2008-01-01

    This experiment was carried out on a grower's paddy field, Ban Som Hoeng Village, Kantarawichai, Mahasarakham Province, Northeast Thailand with the use of Roi-Et soil series (Oxic Paleustults) in the rainy season of the 2006 (May to November) to investigate effect of land preparation methods on rice plant heights, amounts of weeds and seed yields of Jasmine 105 aromatic paddy rice (Oryza sativa L.). The experiment was laid in a Randomized Complete Block Design (RCBD) with four replications. The results showed that plant height due to treatments was significantly highest for T3 but T3 was similar to T2, whilst T1 (control) was the least. Mean values of dry weight of narrow leaf type of weeds, in most cases, were significantly lowest with T3 followed by T2 and T3, particularly at the final two sampling periods. Broad leaf type of weeds was significantly highest with T2 throughout the experimental period, whilst T1 and T3, in most cases, were similar. Unfilled seeds were significantly highest with T3 but similar to T1 but T2 was the lowest, whilst filled seeds were significantly highest with T3, both T1 and T2 gave a similar weight. Numbers of panicles m(-2) were significantly highest with T3 but T3 was similar to T2, whilst T1 was the least. Seed size or 1000-seed weight was significantly highest with T3, whilst T2 and T1 were similar. Seed yield was highest and highly significant with T3 (1,136.25 kg ha(-1)) but T3 was similar to T2 (1,083.31 kg ha(-1)), whilst T1 was the lowest (487.50 kg ha(-1)). Land preparation method of T3 treatment may be recommended as the first choice, whilst T2 may be used as an alternative choice.

  18. Conservation of IRE1-Regulated bZIP74 mRNA Unconventional Splicing in Rice (Oryza sativa L.) Involved in ER Stress Responses

    Institute of Scientific and Technical Information of China (English)

    Sun-Jie Lu; Zheng-Ting Yang; Ling Sun; Le Sun; Ze-Ting Song; Jian-Xiang Liu

    2012-01-01

    Protein folding in the endoplasmic reticulum (ER) is a fundamental process in plant cells that is vulnerable to many environmental stresses.When unfolded or misfolded proteins accumulate in the ER,the well-conserved unfolded protein response (UPR) is initiated to mitigate the ER stress by enhancing the protein folding capability and/or accelerating the ER-associated protein degradation.Here,we report the conservation of the activation mechanism of OsbZIP74 (also known as OsbZIP50),an important ER stress regulator in monocot plant rice (Oryza sativa L.).Under normal conditions,OsbZIP74 mRNA encodes a basic leucine-zipper transcription factor with a putative transmembrane domain.When treating with ER stress-inducing agents such as tunicamycin and DTT,the conserved double stem-loop structures of OsbZIP74 mRNA are spliced out.Thereafter,the resulting new OsbZIP74 mRNA produces the nucleus-localized form of OsbZIP74 protein,eliminating the hydrophobic region.The activated form of OsbZIP74 has transcriptional activation activity in both yeast cells and Arabidopsis leaf protoplasts.The induction of OsbZIP74 splicing is much suppressed in the OsIRE1 knockdown rice plants,indicating the involvement of OsIRE1 in OsbZIP74 splicing.We also demonstrate that the unconventional splicing of OsbZIP74 mRNA is associated with heat stress and salicylic acid,which is an important plant hormone in systemic acquired resistance against pathogen or parasite.

  19. Studies on the Mechanism of Single Basal Application of Controlled-Release Fertilizers for Increasing Yield of Rice (Oryza sativa L.)

    Institute of Scientific and Technical Information of China (English)

    TANG Shuan-hu; YANG Shao-hai; CHEN Jian-sheng; XU Pei-zhi; ZHANG Fa-bao; AI Shao-ying; HUANG Xu

    2007-01-01

    This paper was to explore the mechanism of single basal application of controlled-release fertilizers for increasing yield of rice (Oryza sativa L.). Pot trials and cylinder trials were carried out from 2002 to 2005 to study the influences of single basal application of 3 controlled-release fertilizers on the changes of soil available N, root development, senescence and lodging resistance at late growth stages. Results showed that at 30 days after fertilization, single basal application of controlled-release fertilizers coated with vegetal-substance (CRF1) and polymer materials (CRF3) increased soil available N to 12.0 and 147.9%, respectively, in comparison to split fertilization of rice-specific fertilizer (RSF1). Treatments of the two CRFs obviously benefited the development of root system, resulting in greater rice root weights with extensive distribution and higher root activity. In addition, the two CRF treatments, in comparison to RSF1, enhanced chlorophyll consents of the flag leaves to 9.5 and 15.5%, and soluble protein up to 89.7 and 108.0% respectively. Application of the two CRFs also made the base of rice stems strong and large, declined the proportion of shoot and root, increased root depth index. Though relatively low K rate, single basal application of the CRF3 coated with NH4MgPO4 could also promote the development of root system, enhance root activity and some physiological functions of flag leaves. Based on these results, it was concluded that major mechanisms for increasing rice yield by single basal application of the CRFs should be attributed to grater soil available N supply, superior development of root systems, better nutrient absorption capacity, slower senescence and enhancement of lodging resistance at late stages.

  20. C-terminal extension of calmodulin-like 3 protein from Oryza sativa L.: interaction with a high mobility group target protein.

    Science.gov (United States)

    Chinpongpanich, Aumnart; Phean-O-Pas, Srivilai; Thongchuang, Mayura; Qu, Li-Jia; Buaboocha, Teerapong

    2015-11-01

    A large number of calmodulin-like (CML) proteins are present in plants, but there is little detailed information on the functions of these proteins in rice (Oryza sativa L.). Here, the CML3 protein from rice (OsCML3) and its truncated form lacking the C-terminal extension (OsCML3m) were found to exhibit a Ca2+-binding property and subsequent conformational change, but the ability to bind the CaM kinase II peptide was only observed for OsCML3m. Changes in their secondary structure upon Ca2+-binding measured by circular dichroism revealed that OsCML3m had a higher helical content than OsCML3. Moreover, OsCML3 was mainly localized in the plasma membrane, whereas OsCML3m was found in the nucleus. The rice high mobility group B1 (OsHMGB1) protein was identified as one of the putative OsCML3 target proteins. Bimolecular fluorescence complementation analysis revealed that OsHMGB1 bound OsCML3, OsCML3m or OsCML3s (cysteine to serine mutation at the prenylation site) in the nucleus presumably through the methionine and phenylalanine-rich hydrophobic patches, confirming that OsHMGB1 is a target protein in planta. The effect of OsCML3 or OsCML3m on the DNA-binding ability of OsHMGB1 was measured using an electrophoretic mobility shift assay. OsCML3m decreased the level of OsHMGB1 binding to pUC19 double-stranded DNA whereas OsCML3 did not. Taken together, OsCML3 probably provides a mechanism for manipulating the DNA-binding ability of OsHMGB1 in the nucleus and its C-terminal extension provides an intracellular Ca2+ regulatory switch.

  1. Mapping QTLs Linked to Physio-Morphological and Plant Production Traits under Drought Stress in Rice (Oryza sativa L. in the Target Environment

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    S. M. Gomez

    2006-01-01

    Full Text Available Drought stress is a major constraint for rice (Oryza sativa L. production and yield stability in rainfed ecosystems. Identifying genomic regions (QTLs contributing in drought resistance will help to develop rice cultivars suitable for water-limiting environments through marker-assisted breeding. QTLs linked to physio-morphological and plant production traits under drought stress in the field were mapped by evaluating 177 F6 recombinant inbred (RI lines of Bala × Azucena under rainfed conditions in the target environment (TE. The rice lines were subjected to severe drought stress during reproductive phase due to a natural rainfall failure event. The RI lines showed significant variation in physio-morphological and plant production traits under stress. A total of 24 QTLs were identified for various traits under stress, which individually explained 4.6 to 22.3% phenotypic variation. Composite interval mapping detected three markers viz., RM3894, RG409 and G1073 on chromosomes 3 and 8 linked to grain yield under drought stress in TE, respectively explaining 22..3, 17.1 and 10.9% of phenotypic variation. QTLs for leaf drying, days to 50% flowering and number of productive tillers under drought stress co-located at certain of these regions. Further, QTLs for several root traits overlapped with QTLs for grain yield under stress in these RI lines, indicating the pleiotropic effects of root trait QTLs on rice performance under stress. Correlation coefficients between potential root traits determined in another study and plant production under stress in this study were not significant in these RI lines. Consistent QTLs for drought resistance traits and yield under drought stress in TE were detected and might be useful for rainfed rice improvement.

  2. Zn uptake, translocation and grain Zn loading in rice (Oryza sativa L.) genotypes selected for Zn deficiency tolerance and high grain Zn.

    Science.gov (United States)

    Impa, Somayanda M; Morete, Mark J; Ismail, Abdelbagi M; Schulin, Rainer; Johnson-Beebout, Sarah E

    2013-07-01

    Zn deficiency is a widespread problem in rice (Oryza sativa L.) grown under flooded conditions, limiting growth and grain Zn accumulation. Genotypes with Zn deficiency tolerance or high grain Zn have been identified in breeding programmes, but little is known about the physiological mechanisms conferring these traits. A protocol was developed for growing rice to maturity in agar nutrient solution (ANS), with optimum Zn-sufficient growth achieved at 1.5 μM ZnSO4.7H2O. The redox potential in ANS showed a decrease from +350 mV to -200 mV, mimicking the reduced conditions of flooded paddy soils. In subsequent experiments, rice genotypes contrasting for Zn deficiency tolerance and grain Zn were grown in ANS with sufficient and deficient Zn to assess differences in root uptake of Zn, root-to-shoot Zn translocation, and in the predominant sources of Zn accumulation in the grain. Zn efficiency of a genotype was highly influenced by root-to-shoot translocation of Zn and total Zn uptake. Translocation of Zn from root to shoot was more limiting at later growth stages than at the vegetative stage. Under Zn-sufficient conditions, continued root uptake during the grain-filling stage was the predominant source of grain Zn loading in rice, whereas, under Zn-deficient conditions, some genotypes demonstrated remobilization of Zn from shoot and root to grain in addition to root uptake. Understanding the mechanisms of grain Zn loading in rice is crucial in selecting high grain Zn donors for target-specific breeding and also to establish fertilizer and water management strategies for achieving high grain Zn.

  3. Small kernel 1 encodes a pentatricopeptide repeat protein required for mitochondrial nad7 transcript editing and seed development in maize (Zea mays) and rice (Oryza sativa).

    Science.gov (United States)

    Li, Xiao-Jie; Zhang, Ya-Feng; Hou, Mingming; Sun, Feng; Shen, Yun; Xiu, Zhi-Hui; Wang, Xiaomin; Chen, Zong-Liang; Sun, Samuel S M; Small, Ian; Tan, Bao-Cai

    2014-09-01

    RNA editing modifies cytidines (C) to uridines (U) at specific sites in the transcripts of mitochondria and plastids, altering the amino acid specified by the DNA sequence. Here we report the identification of a critical editing factor of mitochondrial nad7 transcript via molecular characterization of a small kernel 1 (smk1) mutant in Zea mays (maize). Mutations in Smk1 arrest both the embryo and endosperm development. Cloning of Smk1 indicates that it encodes an E-subclass pentatricopeptide repeat (PPR) protein that is targeted to mitochondria. Loss of SMK1 function abolishes the C → U editing at the nad7-836 site, leading to the retention of a proline codon that is edited to encode leucine in the wild type. The smk1 mutant showed dramatically reduced complex-I assembly and NADH dehydrogenase activity, and abnormal biogenesis of the mitochondria. Analysis of the ortholog in Oryza sativa (rice) reveals that rice SMK1 has a conserved function in C → U editing of the mitochondrial nad7-836 site. T-DNA knock-out mutants showed abnormal embryo and endosperm development, resulting in embryo or seedling lethality. The leucine at NAD7-279 is highly conserved from bacteria to flowering plants, and analysis of genome sequences from many plants revealed a molecular coevolution between the requirement for C → U editing at this site and the existence of an SMK1 homolog. These results demonstrate that Smk1 encodes a PPR-E protein that is required for nad7-836 editing, and this editing is critical to NAD7 function in complex-I assembly in mitochondria, and hence to embryo and endosperm development in maize and rice.

  4. The effect of Silicon on photosynthesis and expression of its relevant genes in rice (Oryza sativa L.) under high-zinc stress.

    Science.gov (United States)

    Song, Alin; Li, Ping; Fan, Fenliang; Li, Zhaojun; Liang, Yongchao

    2014-01-01

    The main objectives of this study were to elucidate the roles of silicon (Si) in alleviating the effects of 2 mM zinc (high Zn) stress on photosynthesis and its related gene expression levels in leaves of rice (Oryza sativa L.) grown hydroponically with high-Zn stress. The results showed that photosynthetic parameters, including net photosynthetic rate, transpiration rate, stomatal conductance, intercellular CO2 concentration, chlorophyll concentration and the chlorophyll fluorescence, were decreased in rice exposed to high-Zn treatment. The leaf chloroplast structure was disordered under high-Zn stress, including uneven swelling, disintegrated and missing thylakoid membranes, and decreased starch granule size and number, which, however, were all counteracted by the addition of 1.5 mM Si. Furthermore, the expression levels of Os08g02630 (PsbY), Os05g48630 (PsaH), Os07g37030 (PetC), Os03g57120 (PetH), Os09g26810 and Os04g38410 decreased in Si-deprived plants under high-Zn stress. Nevertheless, the addition of 1.5 mM Si increased the expression levels of these genes in plants under high-Zn stress at 72 h, and the expression levels were higher in Si-treated plants than in Si-deprived plants. Therefore, we conclude that Si alleviates the Zn-induced damage to photosynthesis in rice. The decline of photosynthesis in Zn-stressed rice was attributed to stomatal limitation, and Si activated and regulated some photosynthesis-related genes in response to high-Zn stress, consequently increasing photosynthesis.

  5. A novel epistatic interaction at two loci causing hybrid male sterility in an inter-subspecific cross of rice (Oryza sativa L.).

    Science.gov (United States)

    Kubo, Takahiko; Yamagata, Yoshiyuki; Eguchi, Maki; Yoshimura, Atsushi

    2008-12-01

    Postzygotic reproductive isolation (RI) often arises in inter-subspecific crosses as well as inter-specific crosses of rice (Oryza sativa L.). To further understand the genetic architecture of the postzygotic RI, we analyzed genes causing hybrid sterility and hybrid breakdown in a rice inter-subspecific cross. Here we report hybrid male sterility caused by epistatic interaction between two novel genes, S24 and S35, which were identified on rice chromosomes 5 and 1, respectively. Genetic analysis using near-isogenic lines (NILs) carrying IR24 (ssp. indica) segments with Asominori (ssp. japonica) genetic background revealed a complicated aspect of the epistasis. Allelic interaction at the S24 locus in the heterozygous plants caused abortion of male gametes carrying the Asominori allele (S24-as) independent of the S35 genotype. On the other hand, male gametes carrying the Asominori allele at the S35 locus (S35-as) showed abortion only when the IR24 allele at the S24 locus (S24-ir) was concurrently introgressed into the S35 heterozygous plants, indicating that the sterility phenotype due to S35 was dependent on the S24 genotype through negative epistasis between S24-ir and S35-as alleles. Due to the interaction between S24 and S35, self-pollination of the double heterozygous plants produced pollen-sterile progeny carrying the S24-ir/S24-ir S35-as/S35-ir genotype in addition to the S24 heterozygous plants. This result suggests that the S35 gene might function as a modifier of S24. This study presents strong evidence for the importance of epistatic interaction as a part of the genetic architecture of hybrid sterility in rice. In addition, it suggests that diverse systems have been developed as postzygotic RI mechanisms within the rice.

  6. Emerging Importance of Helicases in Plant Stress Tolerance: Characterization of Oryza sativa Repair Helicase XPB2 Promoter and Its Functional Validation in Tobacco under Multiple Stresses.

    Science.gov (United States)

    Raikwar, Shailendra; Srivastava, Vineet K; Gill, Sarvajeet S; Tuteja, Renu; Tuteja, Narendra

    2015-01-01

    Genetic material always remains at the risk of spontaneous or induced damage which challenges the normal functioning of DNA molecule, thus, DNA repair is vital to protect the organisms against genetic damage. Helicases, the unique molecular motors, are emerged as prospective molecules to engineer stress tolerance in plants and are involved in nucleic acid metabolism including DNA repair. The repair helicase, XPB is an evolutionary conserved protein present in different organisms, including plants. Availability of few efficient promoters for gene expression in plants provoked us to study the promoter of XPB for better understanding of gene regulation under stress conditions. Here, we report the in silico analysis of novel stress inducible promoter of Oryza sativa XPB2 (OsXPB2). The in vivo validation of functionality/activity of OsXPB2 promoter under abiotic and hormonal stress conditions was performed by Agrobacterium-mediated transient assay in tobacco leaves using OsXPB2::GUS chimeric construct. The present research revealed that OsXPB2 promoter contains cis-elements accounting for various abiotic stresses (salt, dehydration, or cold) and hormone (Auxin, ABA, or MeJA) induced GUS expression/activity in the promoter-reporter assay. The promoter region of OsXPB2 contains CACG, GTAACG, CACGTG, CGTCA CCGCCGCGCT cis acting-elements which are reported to be salt, dehydration, cold, MeJA, or ABA responsive, respectively. Functional analysis was done by Agrobacterium-mediated transient assay using agroinfiltration in tobacco leaves, followed by GUS staining and fluorescence quantitative analyses. The results revealed high induction of GUS activity under multiple abiotic stresses as compared to mock treated control. The present findings suggest that OsXPB2 promoter is a multi-stress inducible promoter and has potential applications in sustainable crop production under abiotic stresses by regulating desirable pattern of gene expression.

  7. The effects of nitrogen uptake before and after heading on grain protein content and the occurrence of basal- and back-white grains in rice (Oryza sativa L.

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    Tadashi Tsukaguchi

    2016-10-01

    Full Text Available Chalky rice (Oryza sativa L. grains are induced by high temperature during the grain-filling period. Plant nitrogen status also affects the occurrence of basal- and back-white grains (BBWG. The objective of this study was to elucidate the relations between nitrogen availability per spikelet during the grain-filling period (NGF and each of the percentage of BBWG and grain protein content (GPC. We further compared the effect of the components of NGF determined before heading (NBH and after heading (NAH on BBWG and GPC. We grew the rice cultivar ‘Koshihikari’ in pots in 2012 and 2013, and top-dressed nitrogen at the panicle formation and heading stages, under two (2012 or three (2013 temperature regimes during the grain-filling period. GPC was explained well by NGF, but BBWG was not. BBWG was best explained in a multiple-regression equation by mean air temperature after heading and by NBH and NAH. The partial correlation coefficients for NBH were 1.6 and 3.0 times those for NAH in 2012 and 2013, respectively. On the other hand, in a multiple-regression equation for GPC, the partial correlation coefficients for NBH were 0.91 and 0.71 times those for NAH in 2012 and 2013, respectively. These results suggest that rice grains are most sensitive to plant nitrogen status before heading for BBWG but after heading for GPC, and that there is an optimal timing for nitrogen top-dressing that would maximize the reduction in BBWG per unit increment of GPC.

  8. Genetic analysis and gene mapping of leafy head (lhd), a mutant blocking the differentiation of rachis branches in rice (Oryza sativa L.)

    Institute of Scientific and Technical Information of China (English)

    DUAN Yuanlin; MAO Damei; LI Weiming; XUE Yongbiao; WU Weiren; LIU Huaqing; ZHANG Danfeng; ZHOU Yuanchang; PAN Runsheng; LIN Lihui; CHEN Zhiwei; GUAN Huazhong

    2003-01-01

    A rice mutant called leafy head (lhd), in which the differentiation of rachis branches is blocked, was identified in a doubled haploid (DH) population derived through F1 anther culture from a cross between rice (Oryza sativa L.) indica cultivar Gui-630 and japonica cultivar Taiwanjing. The mutant is shorter in plant height, possessing smaller and clumpy leaves, and always stays at the vegetative growth stage. Genetic analysis suggests that lhd is controlled by a single recessive gene, which is temporarily named lhd(t). The phenotype of the mutant suggests that LHD(t) is a key gene controlling the differentiation of rachis branches. In order to map the gene, two F2 populations were constructed by crossing the lhd heterozygote with varieties Minghui-77 (indica) and Jinghua-8 (japonica). In the F2 of lhd heterozygote ( Jinghua-8, some mutant plants appeared as the "medium type", suggesting that the lhd phenotype could be influenced by genetic backgrounds. With the published SSR markers of RM series and additional SSR markers developed by ourselves and using the methods of bulked segregant analysis (BSA) and mutant analysis (with 498 mutant plants in total), LHD(t) gene was mapped onto the distal region of the long arm of chromosome 10. Markers SSR1, RM269, RM258, RM304 and RM171 were located on one side with distances of 6.4, 16.6, 18.4, 22.2 and 26.3 cM to LHD(t); whereas markers SSR4 and SSR5 were on the other side with distances of 0.6 and 2.2 cM to LHD(t). The results will facilitate the positional cloning and functional study of the LHD(t) gene.

  9. Zinc absorption from low phytic acid genotypes of maize (Zea mays L.), Barley (Hordeum vulgare L.), and Rice (Oryza sativa L.) assessed in a suckling rat pup model.

    Science.gov (United States)

    Lönnerdal, Bo; Mendoza, Concepcion; Brown, Kenneth H; Rutger, J Neil; Raboy, Victor

    2011-05-11

    Dietary phytic acid is a major causative factor for low Zn bioavailability in many cereal- and legume-based diets. The bioavailability of Zn in seed of low phytic acid (lpa) variants of maize ( Zea mays L.), rice ( Oryza sativa L.), and barley ( Hordeum vulgare L.) was evaluated using a suckling rat pup model. Suckling rat pups (14 days old, n = 6-8/treatment) were fasted for 6 h and intubated with (65)Zn-radiolabeled suspensions prepared using seed produced by either wild-type (normal phytic acid) or lpa genotypes of each cereal. Test solutions were radiolabeled overnight (all genotypes) or immediately prior to intubation (barley genotypes). Pups were killed 6 h postintubation and tissues removed and counted in a gamma counter. Zn absorption was low from wild-type genotypes of maize (21, 33%) and rice (26%), and phytic acid reduction resulted in significantly higher Zn absorption, 47-52 and 35-52%, respectively. Zn absorption from wild-type barley incubated overnight was high (86-91%), and phytate reduction did not improve Zn absorption (84-90%), which is likely due to endogenous phytase activity. When the wild-type barley solutions were prepared immediately before intubation, Zn absorption was significantly lower (63, 78%) than from the lpa cultivars (92, 96%). Variation in seed or flour phenolic acid levels did not affect Zn absorption. Differences in seed Zn levels did not substantially affect Zn absorption. Thus, when phytic acid is abundant in a diet, it has a larger effect on Zn absorption than the level of Zn. Therefore, reducing the phytic acid content of staple cereal grains may contribute to enhancing Zn nutrition of populations consuming these staple foods.

  10. Evaluation of physiological and biochemical responses of two rice (Oryza sativa L.) cultivars to ambient air pollution using open top chambers at a rural site in India.

    Science.gov (United States)

    Rai, Richa; Agrawal, Madhoolika

    2008-12-15

    Air pollutant concentrations are rising in India, causing potential threats to crop production. As air pollutants are known to interfere with physiological processes, this study was conducted to assess the relative responses of physiological and biochemical characteristics of two cultivars of rice (Oryza sativa L. cv. Saurabh 950 and NDR 97) leading to variable yield responses. Twelve hour monitoring of ambient concentrations of SO2, NO2 and O3 in filtered chambers (FCs), non-filtered chambers (NFCs) and open plots (OPs) showed that O3 was the main pollutant at the experimental site. Ozone concentrations often exceeded 40 ppb during anthesis but not during the vegetative growth period. Photosynthetic rate (Ps), stomatal conductance (g(s)) and Fv/Fm ratio, superoxide dismutase (SOD) and peroxidase (POD) activities and photosynthetic pigments, ascorbic acid, total phenolics and protein contents were assessed at different developmental stages and yield of grains were quantified. Lipid peroxidation, SOD and POD activities, ascorbic acid and total phenolics were higher, whereas Ps, g(s), Fv/Fm ratio and contents of protein and photosynthetic pigment were lower in plants of NFCs as compared to FCs. Yield decreased significantly in both cultivars grown in NFCs. NDR 97 showed less reductions in physiological characteristics, photosynthetic pigments and protein, but a greater increase in the antioxidative defense system as compared to Saurabh 950. Yield reduction was higher in NDR 97 than in Saurabh 950. This suggested that NDR 97 utilized more photosynthate in maintaining the metabolic machinery against O3 stress leading to lower translocation of photosynthate to reproductive parts. The study concluded that under natural field conditions, physiological and biochemical responses of plants varied with pollutant concentrations leading to different translocation strategies in plants, modifying their yield responses. NDR 97, a fast growing and high yielding cultivar was more

  11. Low pH-induced changes of antioxidant enzyme and ATPase activities in the roots of rice (Oryza sativa L. seedlings.

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    Yi-Kai Zhang

    Full Text Available Soil acidification is the main problem in the current rice production. Here, the effects of low pH on the root growth, reactive oxygen species metabolism, plasma membrane functions, and the transcript levels of the related genes were investigated in rice seedlings (Oryza sativa L. in a hydroponic system at pH 3.5, 4.5, and 5.5. There were two hybrid rice cultivars in this trial, including Yongyou 12 (YY12, a japonica hybrid and Zhongzheyou 1 (ZZY1, an indica hybrid. Higher H+ activity markedly decreased root length, the proportion of fine roots, and dry matter production, but induced a significant accumulation of hydrogen peroxide (H2O2, and led to serious lipid peroxidation in the roots of the two varieties. The transcript levels of copper/zinc superoxide dismutase 1 (Cu/Zn SOD1, copper/zinc superoxide dismutase 2 (Cu/Zn SOD2, catalase A (CATA and catalase B (CATB genes in YY12 and ZZY1 roots were significantly down-regulated after low pH exposure for two weeks. Meanwhile, a significant decrease was observed in the expression of the P-type Ca2+-ATPases in roots at pH 3.5. The activities of antioxidant enzymes (SOD, CAT and plasma membrane (PM Ca2+-ATPase in the two varieties were dramatically inhibited by strong rhizosphere acidification. However, the expression levels of ascorbate peroxidase 1 (APX1 and PM H+-ATPase isoform 7 were up-regulated under H+ stress compared with the control. Significantly higher activities of APX and PM H+-ATPase could contribute to the adaptation of rice roots to low pH.

  12. The effect of Silicon on photosynthesis and expression of its relevant genes in rice (Oryza sativa L. under high-zinc stress.

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    Alin Song

    Full Text Available The main objectives of this study were to elucidate the roles of silicon (Si in alleviating the effects of 2 mM zinc (high Zn stress on photosynthesis and its related gene expression levels in leaves of rice (Oryza sativa L. grown hydroponically with high-Zn stress. The results showed that photosynthetic parameters, including net photosynthetic rate, transpiration rate, stomatal conductance, intercellular CO2 concentration, chlorophyll concentration and the chlorophyll fluorescence, were decreased in rice exposed to high-Zn treatment. The leaf chloroplast structure was disordered under high-Zn stress, including uneven swelling, disintegrated and missing thylakoid membranes, and decreased starch granule size and number, which, however, were all counteracted by the addition of 1.5 mM Si. Furthermore, the expression levels of Os08g02630 (PsbY, Os05g48630 (PsaH, Os07g37030 (PetC, Os03g57120 (PetH, Os09g26810 and Os04g38410 decreased in Si-deprived plants under high-Zn stress. Nevertheless, the addition of 1.5 mM Si increased the expression levels of these genes in plants under high-Zn stress at 72 h, and the expression levels were higher in Si-treated plants than in Si-deprived plants. Therefore, we conclude that Si alleviates the Zn-induced damage to photosynthesis in rice. The decline of photosynthesis in Zn-stressed rice was attributed to stomatal limitation, and Si activated and regulated some photosynthesis-related genes in response to high-Zn stress, consequently increasing photosynthesis.

  13. Physiological basis of genetic variation in leaf photosynthesis among rice (Oryza sativa L.) introgression lines under drought and well-watered conditions.

    Science.gov (United States)

    Gu, Junfei; Yin, Xinyou; Stomph, Tjeerd-Jan; Wang, Huaqi; Struik, Paul C

    2012-09-01

    To understand the physiological basis of genetic variation and resulting quantitative trait loci (QTLs) for photosynthesis in a rice (Oryza sativa L.) introgression line population, 13 lines were studied under drought and well-watered conditions, at flowering and grain filling. Simultaneous gas exchange and chlorophyll fluorescence measurements were conducted at various levels of incident irradiance and ambient CO(2) to estimate parameters of a model that dissects photosynthesis into stomatal conductance (g(s)), mesophyll conductance (g(m)), electron transport capacity (J(max)), and Rubisco carboxylation capacity (V(cmax)). Significant genetic variation in these parameters was found, although drought and leaf age accounted for larger proportions of the total variation. Genetic variation in light-saturated photosynthesis and transpiration efficiency (TE) were mainly associated with variation in g(s) and g(m). One previously mapped major QTL of photosynthesis was associated with variation in g(s) and g(m), but also in J(max) and V(cmax) at flowering. Thus, g(s) and g(m), which were demonstrated in the literature to be responsible for environmental variation in photosynthesis, were found also to be associated with genetic variation in photosynthesis. Furthermore, relationships between these parameters and leaf nitrogen or dry matter per unit area, which were previously found across environmental treatments, were shown to be valid for variation across genotypes. Finally, the extent to which photosynthesis rate and TE can be improved was evaluated. Virtual ideotypes were estimated to have 17.0% higher photosynthesis and 25.1% higher TE compared with the best genotype investigated. This analysis using introgression lines highlights possibilities of improving both photosynthesis and TE within the same genetic background.

  14. Cloning of a putative monogalactosyldiacylglycerol synthase gene from rice (Oryza sativa L.) plants and its expression in response to submergence and other stresses.

    Science.gov (United States)

    Qi, Yanhua; Yamauchi, Yasuo; Ling, Jianqun; Kawano, Naoyoshi; Li, Debao; Tanaka, Kiyoshi

    2004-07-01

    Suppression subtractive hybridization was used to construct a subtractive cDNA library from plants of non-submerged and 7-day-submerged rice (Oryza sativa L., FR13A, a submergence-tolerant cultivar). One clone of the subtractive cDNA library, S23, was expressed abundantly during submergence. The full length of S23 was amplified using 5'- and 3'-rapid amplification of cDNA ends, and found to consist of 1,671 bp with an open reading frame of 1,077 bp (181-1257) encoding 358 amino acids. Its deduced amino acid sequence showed a high homology with monogalactosyldiacylglycerol synthase (UDPgalactose: 1,2-diacylglycerol 3-beta-D-galactosyl transferase; EC 2.4.1.46, MGDG synthase) from Arabidopsis thaliana; therefore, we named the gene OsMGD. Time-course studies showed that the expression of OsMGD in the rice cultivars FR13A and IR42 (submergence-susceptive cultivar) during submergence was gradually increased and that expression in FR13A was higher than in IR42. The expression of OsMGD in FR13A was influenced by benzyladenine and illumination. The accumulation of OsMGD mRNA in both FR13A and IR42 was also increased by ethephon, gibberellin, drought and salt treatment, but cold stress had no effect on the expression of the gene. These results suggest that the expression of OsMGD mRNA requires benzyladenine or illumination, and that the process is also mediated by ethephon and gibberellin. Salt and drought stress have an effect similar to that of submergence. Furthermore, the enhanced expression of OsMGD may relate to photosynthesis, and play an important role during submergence.

  15. Potential Application of the Oryza sativa Monodehydroascorbate Reductase Gene (OsMDHAR to Improve the Stress Tolerance and Fermentative Capacity of Saccharomyces cerevisiae.

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    Il-Sup Kim

    Full Text Available Monodehydroascorbate reductase (MDHAR; EC 1.6.5.4 is an important enzyme for ascorbate recycling. To examine whether heterologous expression of MDHAR from Oryza sativa (OsMDHAR can prevent the deleterious effects of unfavorable growth conditions, we constructed a transgenic yeast strain harboring a recombinant plasmid carrying OsMDHAR (p426GPD::OsMDHAR. OsMDHAR-expressing yeast cells displayed enhanced tolerance to hydrogen peroxide by maintaining redox homoeostasis, proteostasis, and the ascorbate (AsA-like pool following the accumulation of antioxidant enzymes and molecules, metabolic enzymes, and molecular chaperones and their cofactors, compared to wild-type (WT cells carrying vector alone. The addition of exogenous AsA or its analogue isoascorbic acid increased the viability of WT and ara2Δ cells under oxidative stress. Furthermore, the survival of OsMDHAR-expressing cells was greater than that of WT cells when cells at mid-log growth phase were exposed to high concentrations of ethanol. High OsMDHAR expression also improved the fermentative capacity of the yeast during glucose-based batch fermentation at a standard cultivation temperature (30°C. The alcohol yield of OsMDHAR-expressing transgenic yeast during fermentation was approximately 25% (0.18 g·g-1 higher than that of WT yeast. Accordingly, OsMDHAR-expressing transgenic yeast showed prolonged survival during the environmental stresses produced during fermentation. These results suggest that heterologous OsMDHAR expression increases tolerance to reactive oxygen species-induced oxidative stress by improving cellular redox homeostasis and improves survival during fermentation, which enhances fermentative capacity.

  16. Detection of DNA polymerase λ activity during seed germination and enhancement after salinity stress and dehydration in the plumules of indica rice (Oryza sativa L.

    Science.gov (United States)

    Sihi, Sayantani; Bakshi, Sankar; Sengupta, Dibyendu Narayan

    2015-02-01

    DNA polymerase λ (DNA pol λ) is the only reported X-family DNA polymerases in plants and has been shown to play a significant role in dry quiescent seeds, growth, development and nuclear DNA repair. cDNA for DNA pol λ has been reported in Arabidopsis and japonica rice cultivar and has been characterized from E. coli expressed protein, but very little is known about its activity at protein level in plants. The enzymatic activity of DNA pol λ was studied in dry, imbibed and during different germination stages of indica rice IR-8 (salt sensitive) by in-gel activity assay to determine its physiological role in important stages of growth and development. The upstream sequence was also analyzed using plantCARE database and was found to contain several cis-acting elements, including light responsive elements, dehydration responsive elements, Myb binding sites, etc. Hence, 4-day-old germinating seedlings of IR29, a salt-sensitive, but high yielding indica rice cultivar and Nonabokra, a salt-tolerant, but low yielding cultivar were treated with water (control) or 250 mM NaCl or 20% polyethyleneglycol-6000 for 4 and 8 h. The protein was analyzed by in vitro DNA pol λ activity assay, in-gel activity assay and Western blot analysis. DNA pol λ was not detected in dry seeds, but enhanced after imbibition and detectable from low level to high level during subsequent germination steps. Both salinity and dehydration stress led to the enhancement of the activity and protein level of DNA pol λ, as compared to control tissues. This is the first evidence of the salinity or dehydration stress induced enhancement of DNA pol λ activity in the plumules of rice (Oryza sativa L.) cultivars.

  17. Heat and chilling induced disruption of redox homeostasis and its regulation by hydrogen peroxide in germinating rice seeds (Oryza sativa L., Cultivar Ratna).

    Science.gov (United States)

    Bhattacharjee, Soumen

    2013-04-01

    Extremes of temperature (both heat and chilling) during early inbibitional phase of germination caused disruption of redox-homeostasis by increasing accumulation of reactive oxygen species (superoxide and hydrogen peroxide) and significant reduction of antioxidative defense (assessed in terms of total thiol content and activities of superoxide dismutase, catalase, ascorbate peroxidase and glutathione reductase) in germinating tissues of rice (Oryza sativa L., cultivar Ratna). Imbibitional heat and chilling stress also induced oxidative damage to newly assembled membrane system by aggravating membrane lipid peroxidation and protein oxidation [measured in terms of thiobarbituric acid reactive substances (TBARS), free carbonyl content (C = O groups) and membrane protein thiol level (MPTL)]. Treatment with standardized low titer hydrogen peroxide during early imbibitional phase of germination caused significant reversal in oxidative damages to the newly assembled membrane system imposed by heat and chilling stress [evident from the data of TBARS, C = O, MPTL, ROS accumulation, membrane permeability status, membrane injury index and oxidative stress index] in seedlings of experimental rice cultivar. Imbibitional H2O2 pretreatment also caused up-regulation of antioxidative defense (activities of superoxide dismutase, catalase, ascorbate peroxidase, glutathione reductase and total thiol content) in the heat and chilling stress-raised rice seedlings. When the parameters of early growth performances were assessed (in terms of relative growth index, biomass accumulation, relative germination performance, mean daily germination, T50 value), it clearly exhibited significant improvement of early growth performances of the experimental rice cultivar. The result proposes that an 'inductive pulse' of H2O2 is required to switch on some stress acclimatory metabolism through which plant restores redox homeostasis and prevents or repairs oxidative damages to newly assembled membrane

  18. Complex evolution of S5, a major reproductive barrier regulator, in the cultivated rice Oryza sativa and its wild relatives.

    Science.gov (United States)

    Du, Hongyi; Ouyang, Yidan; Zhang, Chengjun; Zhang, Qifa

    2011-07-01

    • The hybrid sterility gene S5 comprises three types of alleles in cultivated rice. Such tri-allelic system provided a unique opportunity to study the molecular bases of evolutionary changes underlying reproductive isolation in plants. • We analysed the sequence diversity and evolutionary history of S5 in 138 Oryza accessions. We also examined the effect of the two functional variations (C819A and C1412T) in determining hybrid sterility by transformation. • Nineteen haplotypes were identified, which were classified into the indica-like, the japonica-like and the wide-compatibility gene (WCG)-like group, according to the sequence features of the tri-allelic system. The origin and evolutionary course of the three allelic groups were investigated, thus confirming the independent origins of indica and japonica subspecies. There were perfect associations between C819A and C1412T in the rice germplasm assayed, and the combination of C819 and C1412 was required for hybrid sterility. Evidence of positive selection in the WCG-like alleles suggested that they might have been favored by selection for higher compatibility in hybrids. • The complex evolution of S5 revealed the counteractive function of the three allelic groups at the species level. S5 might perform an important primary function in an evolutionary scale, and hybrid sterility acts as a 'byproduct' of this speciation gene.

  19. Evaluation of estimated daily intake (EDI) of cadmium and lead for rice (Oryza sativa L.) in calcareous soils.

    Science.gov (United States)

    Chamannejadian, Ali; Sayyad, Gholamabbas; Moezzi, Abdolamir; Jahangiri, Alireza

    2013-04-08

    The excessive amounts of cadmium and lead in food chain can cause health problems for humans and ecosystem. Rice is an important food in human diet. Therefore this study was conducted in order to investigate cadmium and Lead concentrations in seed rice (Oryza saliva) of paddy fields in southwest of Iran. A total of 70 rice seed samples were collected from paddy fields in five regions of Khuzestan province, Southwest Iran, during harvesting time. In the samples cadmium and Lead concentrations were measured. To assess the daily intake of Cadmium and Lead by rice, daily consumption of rice was calculated. The results showed that average concentrations of Cadmium and Lead in rice seeds were 273.6 and 121.8 μg/kg, respectively. Less than 72% of rice seed samples had Cadmium concentrations above 200 μg/kg (i.e. Guide value for cadmium); and less than 3% had Lead concentrations above 150 μg/kg (i.e. Guide value for Lead). The estimated daily intakes of cadmium by the local population was calculated to 0.59 μg/day kg bw, which corresponds to 59% of the tolerable daily intakes (i.e. 1 μg/day kg bw). Eleven out of 70 samples (15.71%) exceed the tolerable daily intakes. The dietary intakes for Lead in the local population ranged from 0.22 to 0.47 μg/day kg bw. Tolerable daily intakes for Lead is 3.6 μg/day kg bw. As a whole, long term consumption of the local rice may bear high risk of heavy metal exposure to the consumer in the study region.

  20. Evaluation of Estimated Daily Intake (EDI of Cadmium and Lead for Rice (Oryza sativa L. in Calcareous Soils

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    Ali Chamannejadian

    2013-04-01

    Full Text Available The excessive amounts of cadmium and lead in food chain can cause health problems for humans and ecosystem. Rice is an important food in human diet. Therefore this study was conducted in order to investigate cadmium and Lead concentrations in seed rice (Oryza saliva of paddy fields in southwest of Iran. A total of 70 rice seed samples were collected from paddy fields in five regions of Khuzestan province, Southwest Iran, during harvesting time. In the samples cadmium and Lead concentrations were measured. To assess the daily intake of Cadmium and Lead by rice, daily consumption of rice was calculated. The results showed that average concentrations of Cadmium and Lead in rice seeds were 273.6 and 121.8 μg/kg, respectively. Less than 72% of rice seed samples had Cadmium concentrations above 200 μg/kg (i.e. Guide value for cadmium; and less than 3% had Lead concentrations above 150 μg/kg (i.e. Guide value for Lead. The estimated daily intakes of cadmium by the local population was calculated to 0.59 μg/day kg bw, which corresponds to 59% of the tolerable daily intakes (i.e. 1 μg/day kg bw. Eleven out of 70 samples (15.71% exceed the tolerable daily intakes. The dietary intakes for Lead in the local population ranged from 0.22 to 0.47 μg/day kg bw. Tolerable daily intakes for Lead is 3.6 μg/day kg bw. As a whole, long term consumption of the local rice may bear high risk of heavy metal exposure to the consumer in the study region.

  1. Genetic basis of multiple resistance to the brown planthopper (Nilaparvata lugens Stål) and the green rice leafhopper (Nephotettix cincticeps Uhler) in the rice cultivar 'ASD7' (Oryza sativa L. ssp. indica).

    Science.gov (United States)

    Van Mai, Tan; Fujita, Daisuke; Matsumura, Masaya; Yoshimura, Atsushi; Yasui, Hideshi

    2015-12-01

    The rice cultivar ASD7 (Oryza sativa L. ssp. indica) is resistant to the brown planthopper (BPH; Nilaparvata lugens Stål) and the green leafhopper (Nephotettix virescens Distant). Here, we analyzed multiple genetic resistance to BPH and the green rice leafhopper (GRH; Nephotettix cincticeps Uhler). Using two independent F2 populations derived from a cross between ASD7 and Taichung 65 (Oryza sativa ssp. japonica), we detected two QTLs (qBPH6 and qBPH12) for resistance to BPH and one QTL (qGRH5) for resistance to GRH. Linkage analysis in BC2F3 populations revealed that qBPH12 controlled resistance to BPH and co-segregated with SSR markers RM28466 and RM7376 in plants homozygous for the ASD7 allele at qBPH6. Plants homozygous for the ASD7 alleles at both QTLs showed a much faster antibiosis response to BPH than plants homozygous at only one of these QTLs. It revealed that epistatic interaction between qBPH6 and qBPH12 is the basis of resistance to BPH in ASD7. In addition, qGRH5 controlled resistance to GRH and co-segregated with SSR markers RM6082 and RM3381. qGRH5 is identical to GRH1. Thus, we clarified the genetic basis of multiple resistance of ASD7 to BPH and GRH.

  2. Genetic basis of multiple resistance to the brown planthopper (Nilaparvata lugens Stål) and the green rice leafhopper (Nephotettix cincticeps Uhler) in the rice cultivar ‘ASD7’ (Oryza sativa L. ssp. indica)

    Science.gov (United States)

    Van Mai, Tan; Fujita, Daisuke; Matsumura, Masaya; Yoshimura, Atsushi; Yasui, Hideshi

    2015-01-01

    The rice cultivar ASD7 (Oryza sativa L. ssp. indica) is resistant to the brown planthopper (BPH; Nilaparvata lugens Stål) and the green leafhopper (Nephotettix virescens Distant). Here, we analyzed multiple genetic resistance to BPH and the green rice leafhopper (GRH; Nephotettix cincticeps Uhler). Using two independent F2 populations derived from a cross between ASD7 and Taichung 65 (Oryza sativa ssp. japonica), we detected two QTLs (qBPH6 and qBPH12) for resistance to BPH and one QTL (qGRH5) for resistance to GRH. Linkage analysis in BC2F3 populations revealed that qBPH12 controlled resistance to BPH and co-segregated with SSR markers RM28466 and RM7376 in plants homozygous for the ASD7 allele at qBPH6. Plants homozygous for the ASD7 alleles at both QTLs showed a much faster antibiosis response to BPH than plants homozygous at only one of these QTLs. It revealed that epistatic interaction between qBPH6 and qBPH12 is the basis of resistance to BPH in ASD7. In addition, qGRH5 controlled resistance to GRH and co-segregated with SSR markers RM6082 and RM3381. qGRH5 is identical to GRH1. Thus, we clarified the genetic basis of multiple resistance of ASD7 to BPH and GRH. PMID:26719745

  3. Determination of supplier-to-supplier and lot-to-lot variability in glycation of recombinant human serum albumin expressed in Oryza sativa.

    Directory of Open Access Journals (Sweden)

    Grant E Frahm

    Full Text Available The use of different expression systems to produce the same recombinant human protein can result in expression-dependent chemical modifications (CMs leading to variability of structure, stability and immunogenicity. Of particular interest are recombinant human proteins expressed in plant-based systems, which have shown particularly high CM variability. In studies presented here, recombinant human serum albumins (rHSA produced in Oryza sativa (Asian rice (OsrHSA from a number of suppliers have been extensively characterized and compared to plasma-derived HSA (pHSA and rHSA expressed in yeast (Pichia pastoris and Saccharomyces cerevisiae. The heterogeneity of each sample was evaluated using size exclusion chromatography (SEC, reversed-phase high-performance liquid chromatography (RP-HPLC and capillary electrophoresis (CE. Modifications of the samples were identified by liquid chromatography-mass spectrometry (LC-MS. The secondary and tertiary structure of the albumin samples were assessed with far U/V circular dichroism spectropolarimetry (far U/V CD and fluorescence spectroscopy, respectively. Far U/V CD and fluorescence analyses were also used to assess thermal stability and drug binding. High molecular weight aggregates in OsrHSA samples were detected with SEC and supplier-to-supplier variability and, more critically, lot-to-lot variability in one manufactures supplied products were identified. LC-MS analysis identified a greater number of hexose-glycated arginine and lysine residues on OsrHSA compared to pHSA or rHSA expressed in yeast. This analysis also showed supplier-to-supplier and lot-to-lot variability in the degree of glycation at specific lysine and arginine residues for OsrHSA. Both the number of glycated residues and the degree of glycation correlated positively with the quantity of non-monomeric species and the chromatographic profiles of the samples. Tertiary structural changes were observed for most OsrHSA samples which

  4. Determination of Supplier-to-Supplier and Lot-to-Lot Variability in Glycation of Recombinant Human Serum Albumin Expressed in Oryza sativa

    Science.gov (United States)

    Frahm, Grant E.; Smith, Daryl G. S.; Kane, Anita; Lorbetskie, Barry; Cyr, Terry D.; Girard, Michel; Johnston, Michael J. W.

    2014-01-01

    The use of different expression systems to produce the same recombinant human protein can result in expression-dependent chemical modifications (CMs) leading to variability of structure, stability and immunogenicity. Of particular interest are recombinant human proteins expressed in plant-based systems, which have shown particularly high CM variability. In studies presented here, recombinant human serum albumins (rHSA) produced in Oryza sativa (Asian rice) (OsrHSA) from a number of suppliers have been extensively characterized and compared to plasma-derived HSA (pHSA) and rHSA expressed in yeast (Pichia pastoris and Saccharomyces cerevisiae). The heterogeneity of each sample was evaluated using size exclusion chromatography (SEC), reversed-phase high-performance liquid chromatography (RP-HPLC) and capillary electrophoresis (CE). Modifications of the samples were identified by liquid chromatography-mass spectrometry (LC-MS). The secondary and tertiary structure of the albumin samples were assessed with far U/V circular dichroism spectropolarimetry (far U/V CD) and fluorescence spectroscopy, respectively. Far U/V CD and fluorescence analyses were also used to assess thermal stability and drug binding. High molecular weight aggregates in OsrHSA samples were detected with SEC and supplier-to-supplier variability and, more critically, lot-to-lot variability in one manufactures supplied products were identified. LC-MS analysis identified a greater number of hexose-glycated arginine and lysine residues on OsrHSA compared to pHSA or rHSA expressed in yeast. This analysis also showed supplier-to-supplier and lot-to-lot variability in the degree of glycation at specific lysine and arginine residues for OsrHSA. Both the number of glycated residues and the degree of glycation correlated positively with the quantity of non-monomeric species and the chromatographic profiles of the samples. Tertiary structural changes were observed for most OsrHSA samples which correlated well

  5. Efficacy of Oryza sativa husk and Quercus phillyraeoides extracts for the in vitro and in vivo control of fungal rot disease of white yam (Dioscorea rotundata Poir).

    Science.gov (United States)

    Dania, Victor Ohileobo; Fadina, Olubunmi Omowunmi; Ayodele, Maria; Kumar, P Lava

    2014-01-01

    Tuber rot disease is a major constraint to white yam (Dioscorea rotundata) production, accounting for 50-60% of annual yield losses in Nigeria. The main method of control using synthetic fungicides is being discouraged due to human and environmental health hazards. The potential of Oryza sativa husk (OSH) and Quercus phillyraeoides (QP) extracts for the in vitro and in vivo control of six virulent rot-causing fungal pathogens, Lasiodiplodia theobromae, Aspergillus niger, Rhizoctonia solani, Penicillium oxalicum, Sclerotium rolfsii, and Fusarium oxysporum was evaluated, using five different extract concentrations of 0.5%, 1.0%, 1.5%, 2.5%, and 3.5% w/v. These fungi were isolated from rotted tubers of D. rotundata, across three agroecological zones in Nigeria-the Humid rainforest, Derived savanna, and southern Guinea savanna. All treatments were subjected to three methods of inoculation 48 hours before the application of both extracts and stored at 28 ± 2°C for 6 months. Radial mycelial growth of the test pathogens was effectively inhibited at concentrations ≤ 3.5% w/v in vitro for both OSH and QP extracts. Rotting was significantly reduced (P ≤ 0.05) to between 0 to 18.8% and 0% to 20.9% for OSH and QP extracts respectively. The extracts significantly (P ≤ 0.05) inhibited percent rot of the test pathogens at 3.5% concentration w/v in vivo. Rot incidence was, however, lower in replicate tubers that were inoculated, treated with extracts and exposed than treatments that were covered. Phytochemical analysis of OSH and QP extracts revealed the presence of secondary metabolites such as alkaloids, flavonoids, saponins, tannins, ferulic acid, phlobatanins, Terpenoids, phenols, anthraquinone and pyroligneous acid. The efficacy of both extracts in reducing rot in this study recommends their development as prospective biopesticide formulation and use in the management of post-harvest rot of yam tubers.

  6. Determination of supplier-to-supplier and lot-to-lot variability in glycation of recombinant human serum albumin expressed in Oryza sativa.

    Science.gov (United States)

    Frahm, Grant E; Smith, Daryl G S; Kane, Anita; Lorbetskie, Barry; Cyr, Terry D; Girard, Michel; Johnston, Michael J W

    2014-01-01

    The use of different expression systems to produce the same recombinant human protein can result in expression-dependent chemical modifications (CMs) leading to variability of structure, stability and immunogenicity. Of particular interest are recombinant human proteins expressed in plant-based systems, which have shown particularly high CM variability. In studies presented here, recombinant human serum albumins (rHSA) produced in Oryza sativa (Asian rice) (OsrHSA) from a number of suppliers have been extensively characterized and compared to plasma-derived HSA (pHSA) and rHSA expressed in yeast (Pichia pastoris and Saccharomyces cerevisiae). The heterogeneity of each sample was evaluated using size exclusion chromatography (SEC), reversed-phase high-performance liquid chromatography (RP-HPLC) and capillary electrophoresis (CE). Modifications of the samples were identified by liquid chromatography-mass spectrometry (LC-MS). The secondary and tertiary structure of the albumin samples were assessed with far U/V circular dichroism spectropolarimetry (far U/V CD) and fluorescence spectroscopy, respectively. Far U/V CD and fluorescence analyses were also used to assess thermal stability and drug binding. High molecular weight aggregates in OsrHSA samples were detected with SEC and supplier-to-supplier variability and, more critically, lot-to-lot variability in one manufactures supplied products were identified. LC-MS analysis identified a greater number of hexose-glycated arginine and lysine residues on OsrHSA compared to pHSA or rHSA expressed in yeast. This analysis also showed supplier-to-supplier and lot-to-lot variability in the degree of glycation at specific lysine and arginine residues for OsrHSA. Both the number of glycated residues and the degree of glycation correlated positively with the quantity of non-monomeric species and the chromatographic profiles of the samples. Tertiary structural changes were observed for most OsrHSA samples which correlated well

  7. A DESD-box helicase functions in salinity stress tolerance by improving photosynthesis and antioxidant machinery in rice (Oryza sativa L. cv. PB1).

    Science.gov (United States)

    Gill, Sarvajeet Singh; Tajrishi, Marjan; Madan, Meenu; Tuteja, Narendra

    2013-05-01

    The exact mechanism of helicase-mediated salinity tolerance is not yet understood. We have isolated a DESD-box containing cDNA from Pisum sativum (Pea) and named it as PDH45. It is a unique member of DEAD-box helicase family; containing DESD instead of DEAD/H. PDH45 overexpression driven by constitutive cauliflower mosaic virus-35S promoter in rice transgenic [Oryza sativa L. cv. Pusa Basmati 1 (PB1)] plants confers salinity tolerance by improving the photosynthesis and antioxidant machinery. The Na(+) ion concentration and oxidative stress parameters in leaves of the NaCl (0, 100 or 200 mM) treated PDH45 overexpressing T1 transgenic lines were lower as compared to wild type (WT) rice plants under similar conditions. The 200 mM NaCl significantly reduced the leaf area, plant dry mass, net photosynthetic rate (PN), stomatal conductance (gs), intercellular CO2 (Ci), chlorophyll (Chl) content in WT plants as compared to the transgenics. The T1 transgenics exhibited higher glutathione (GSH) and ascorbate (AsA) contents under salinity stress. The activities of antioxidant enzymes viz. superoxide dismutase (SOD), ascorbate peroxidase (APX), guaiacol peroxidase (GPX) and glutathione reductase (GR) were significantly higher in transgenics; suggesting the existence of an efficient antioxidant defence system to cope with salinity induced-oxidative damage. Yeast two-hybrid assay indicated that the PDH45 protein interacts with Cu/Zn SOD, adenosine-5'-phosphosulfate-kinase, cysteine proteinase and eIF(4G), thus confirming the involvement of ROS scavenging machinery in the transgenic plants to provide salt tolerance. Furthermore, the T2 transgenics were also able to grow, flower, and set viable seeds under continuous salinity stress of 200 mM NaCl. This study provides insights into the mechanism of PDH45 mediated salinity stress tolerance by controlling the generation of stress induced reactive oxygen species (ROS) and also by protecting the photosynthetic machinery through a

  8. Production and Optimization of Oleic Acid Ethyl Ester Synthesis Using Lipase From Rice Bran (Oryza sativa L. and Germinated Jatropha Seeds (Jatropha curcas L. by Response Surface Methodology

    Directory of Open Access Journals (Sweden)

    Indro Prastowo

    2015-11-01

    Full Text Available Normal 0 false false false MicrosoftInternetExplorer4 Recently, the fatty acid ethyl ester has been synthesized in place of fatty acid methyl ester since ethanol has been more renewable. In this research, oleic acid ethyl ester (OAEE was synthesized using germinated jatropha seeds (Jatropha curcas.L and rice bran (Oryza sativa as source of lipase. The objective of the research was to optimize the synthesis conditions using Response Surface Methodology. Factors, such as crude enzyme concentration, molar ratio of oleic acid to ethanol, and the reaction time, were evaluated. The results show that lipase from germinated jatropha seeds had the hydrolitic and esterifi cation activity about 6.73 U/g and 298.07 U/g, respectively. Lipase from rice bran had the hydrolitic and esterifi cation activity about 10.57 U/g and 324.03 U/g, respectively. The optimum conditions of esterifi cation reaction using germinated jatropha seed lipase as biocatalyst were crude enzyme concentration of 0.31 g/ml, molar ratio of oleic acid to ethanol of 1 : 1.81, and reaction time of 50.9 min. The optimum conditions of esterifi cation reaction using rice bran lipase were crude enzyme concentration of 0.29 g/ml, molar ratio of oleic acid to ethanol of 1 : 2.05, and reaction time of 58.61 min. The obtained amounts of OAEE were 810.77 μmole and 626.92 μmole for lipases from rice bran and germinated jatropha seed, respectively. /* Style Definitions */ table.MsoNormalTable {mso-style-name:"Table Normal"; mso-tstyle-rowband-size:0; mso-tstyle-colband-size:0; mso-style-noshow:yes; mso-style-parent:""; mso-padding-alt:0cm 5.4pt 0cm 5.4pt; mso-para-margin:0cm; mso-para-margin-bottom:.0001pt; mso-pagination:widow-orphan; font-size:10.0pt; font-family:"Times New Roman"; mso-fareast-font-family:"Times New Roman"; mso-ansi-language:#0400; mso-fareast-language:#0400; mso-bidi-language:#0400;}

  9. Selenato e selenito na produção e biofortificação agronômica com selênio em arroz

    Directory of Open Access Journals (Sweden)

    Paulo Fernandes Boldrin

    2012-06-01

    Full Text Available O objetivo deste trabalho foi avaliar o efeito da aplicação de doses de selenato e selenito na biofortificação de arroz (Oryza sativa com Se, bem como a influência dessas formas de Se nos teores de P, S, Fe e Zn nos grãos. O experimento foi conduzido em casa de vegetação, em vasos com 4 dm³ de um Latossolo Vermelho-Amarelo distrófico, de textura média, em arranjo fatorial 5x2, com cinco doses de Se (0, 0,75, 1,50, 3,0 e 6,0 mg dm-3 e duas formas de Se (selenato e selenito. Observou-se que o selenato proporcionou maior eficiência na absorção de Se pelas raízes, aproveitamento pela planta, translocação para a parte aérea e teor desse elemento nos grãos. A aplicação do selênio na adubação altera os teores de P, S e Zn, mas não afeta os de Fe nos grãos de arroz.

  10. Enzyme expression in indica and japonica rice cultivars under saline stress=Expressão de enzimas em cultivares de arroz indica e japonica sob estresse salino

    Directory of Open Access Journals (Sweden)

    Cristina Rodrigues Mendes

    2012-10-01

    Full Text Available The southern State of Rio Grande do Sul (RS is the main rice producer in Brazil with a 60% participation of the national production and 86% participation of the region. Rice culture irrigation system is done by flooding, which leads to soil salinization, a major environmental constraint to production since it alters the plants’ metabolism exposed to this type of stress. The indica cultivar, widely used in RS, has a higher sensitivity to salinity when compared to that of the japonica cultivar in other physiological aspects. Current research analyzes enzymes expression involved in salt-subjected indica and japonica rice cultivars’ respiration. Oryza sativa L. spp. japonica S.Kato (BRS Bojuru, IAS 12-9 Formosa and Goyakuman and Oryza sativa L. spp. indica S. Kato (BRS Taim-7, BRS Atalanta and BRS Querencia were the cultivars employed. Seedlings were transferred to 15 L basins containing 50% Hoagland nutrient solution increased by 0, 25, 50, 75 and 100 mM NaCl, and collected at 14, 28 and 42 days after transfer (DAT. Plant tissues were macerated and placed in eppendorf tubes with Scandálios extractor solution. Electrophoresis was performed in 7% of the polyacrylamide gels in vertical vats. Bands were revealed for the following enzymes systems: esterase, alcohol dehydrogenase, phosphoglucoisomerase, malate dehydrogenase, malic enzyme and alpha amylase. The enzymes expression was greater in subspecies japonica, with more intense bands in proportion to salinity increase. Results show that enzyme systems are involved in the salinity defense mechanisms in O. sativa spp. japonica cultivar.O Estado do Rio Grande do Sul (RS destaca-se como principal produtor de arroz, participando com 60% da produção nacional e 86% da regional. O sistema de irrigação da cultura é por inundação, que induz o solo à salinização, um dos maiores limitadores ambientais à produção, alterando o metabolismo da plantas expostas a este tipo de estresse. As cultivares

  11. Physical and physiological rice seed quality in the processing operationQualidade física e fisiológica de sementes de arroz ao longo da linha de beneficiamento

    Directory of Open Access Journals (Sweden)

    Carlos Eduardo Pereira

    2012-12-01

    Full Text Available The seed processing operation is an important stage pos-harvesting to higher physical and physiological seed quality. It was aimed evaluate physical and physiological rice (Oryza sativa L. seed quality during processing operation. There were used rice seeds, cultivar Caiapó, sampled during the following conditioning steps: reception, post-pre-cleaning, post-air screen cleaner and post-gravity separator in the superior, intermediate and inferior fractions. The seeds quality were determinate by tests of purity, hectolictric weight, germination test, emergency, seed of emergency index and blotter test. The rice seeds processing operation with pre-cleaning machines, air screen cleaner and gravity separator, increases the physiological quality of lot. The rice seeds physical quality increased after each machine during the processing operation. O beneficiamento de sementes é uma etapa importante ao final do processo de produção, visando melhorar características físicas de um lote de sementes, bem como o aprimoramento da qualidade fisiológica. Assim, objetivou-se nesse trabalho avaliar a qualidade física e fisiológica de sementes de arroz (Oryza sativa L. durante o beneficiamento. Foram utilizadas sementes de arroz, cultivar Caiapó, amostradas nos seguintes pontos da linha de beneficiamento: recepção, após pré-limpeza, após máquina de ar e peneiras e após mesa gravitacional na descarga superior, intermediária e inferior. Para determinação da qualidade das sementes foram utilizadas as seguintes avaliações: pureza física, peso hectolítrico, teste de germinação, emergência em canteiro, índice de velocidade de emergência e teste de sanidade. O beneficiamento de sementes de arroz com as máquinas de pré-limpeza, ar e peneiras e mesa gravitacional, favorece o potencial fisiológico do lote. A qualidade física do lote de sementes de arroz aumenta gradativamente após a passagem por cada máquina ao longo do beneficiamento.

  12. AISLAMIENTO DE Bacillus SOLUBILIZADORES DE FOSFATOS ASOCIADOS AL CULTIVO DEL ARROZ

    Directory of Open Access Journals (Sweden)

    Berto Tejera-Hern\\u00E1ndez

    2013-01-01

    Full Text Available El objetivo de este trabajo fue determinar la capacidad de bacterias del género Bacillus pro- venientes del cultivo del arroz (Oryza sativa L. en solubilizar fosfatos. Los aislamientos se obtuvieron utilizando el modelo Microcosmos de los cultivares Iacuba 30 y Perla, en el año 2008 en Bauta, La Habana, Cuba. Hubo 58 aislados, tanto rizosféricos como endófitos de la raíz y de la parte aérea, que presentaban características distintivas del género Bacillus, como respuesta positiva a la tinción de Gram, forma bacilar y formación de endospora. Se realizó la detección cualitativa en cuanto a la capacidad de solubilización de fosfatos. Solo 19 aislamientos mostraron solubilización en medio sólido NBRIP y en algunos casos cambiaron la coloración del medio de azul a amarillo, lo que indica la producción de ácidos. Se seleccionaron los positivos para la cuantificación en medio líquido. Las cepas mostraron un comportamiento diferente cuando se midió el fosfato solubilizado a distintos tiempos, variando el máximo de solubilización.

  13. 基因枪法转化水稻(Oryza sativa L.)获得可育的转抗虫基因水稻再生植株%Obtaining Fertile Transgenic Plants of Resistant-insect Rice (Oryza sativa L.) via Particle Bombardment

    Institute of Scientific and Technical Information of China (English)

    安韩冰; 朱祯; 李慧芬; 吴茜; 周兆澜; 徐鸿林; 徐军望; 安利佳; 李向辉

    2001-01-01

    应用基因枪(particle bombardment)转化技术成功地将豇豆胰蛋白酶抑制剂(c owpea trypsin inhibitor, CpTI)基因分别导入三个水稻粳稻栽培品种(Oryza sativa L. , japonica)中花8、中花10和中作321的幼胚和胚性愈伤组织中,并由此获得了可育的再生植 株,抗性植株的筛选频率为6.1%~12.24%。经PCR、Southern blot分子检测和ELISA检测等 证实 所获得的潮霉素抗性植株为转基因植株。抗虫性分析结果表明,部分转基因水稻植株对玉米 螟虫(Ostrinia nubilalis)有较好的抗性。%A cowpea trypsin inhibitor (CpTI) gene was successfully transferred into imm atur e embryos and embryogenic calli of three varieties of rice, Zhonghua 8 , Zhonghu a 10 and Zhongzuo 321 via the particle bombardment. Fertile transgenic rice plan ts were obtained, and confirmed by assay of PCR, Southern blot and ELISA. Select ive frequencies of HygB resistance plants were among 6.1%~12.4%. Resistant-in sect bioassay indicated that some of transgenic rice plants shown good resistance to corn borer (Ostrinia nubilalis).

  14. Optimization on Co-culture of Agrobacterium-mediated Transformation in Oryza sativa%水稻农杆菌转化体系中共培养方法的优化

    Institute of Scientific and Technical Information of China (English)

    马永光; 于翠梅; 杨巍; 徐振峰

    2011-01-01

    [目的]对水稻农杆菌转化体系中共培养过程进行优化。【方法】以水稻品种日本睛作为材料,对2种不同的共培养方法,即将1层无菌滤纸铺于固体共培养基表面和用0.5mLAAM培养液浸湿的无菌滤纸的方法进行比较。【结果】无菌滤纸用0.5mLAAM培养液浸湿后铺于培养皿,后直接将浸染后的愈伤组织在其上进行共培养,效果好且染菌少。【结论】利用0.5mLAAM浸湿的滤纸培养既简化操作又有利于愈伤组织生长。%[Objective] The co-culture of Agrobacterium-mediated transformation in Oryza sativa was optimized. [Method] With Oryza sativa L.japonica. cv. Nipponbare as the tested material, took two different co-culture methods were set up to study the effect of 0.5 mL AAM on co-culture. [Result] The effect of filter paper soaked with 0.5 mL AAM was good and infected bacteria less. [Conclusion] The filter paper soaked with 0.5 mL AAM was beneficial to the callus formation.

  15. QTL analysis of novel genomic regions associated with yield and yield related traits in new plant type based recombinant inbred lines of rice (Oryza sativa L.

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    Marathi Balram

    2012-08-01

    Full Text Available Abstract Background Rice is staple food for more than half of the world’s population including two billion Asians, who obtain 60-70% of their energy intake from rice and its derivatives. To meet the growing demand from human population, rice varieties with higher yield potential and greater yield stability need to be developed. The favourable alleles for yield and yield contributing traits are distributed among two subspecies i.e., indica and japonica of cultivated rice (Oryza sativa L.. Identification of novel favourable alleles in indica/japonica will pave way to marker-assisted mobilization of these alleles in to a genetic background to break genetic barriers to yield. Results A new plant type (NPT based mapping population of 310 recombinant inbred lines (RILs was used to map novel genomic regions and QTL hotspots influencing yield and eleven yield component traits. We identified major quantitative trait loci (QTLs for days to 50% flowering (R2 = 25%, LOD = 14.3, panicles per plant (R2 = 19%, LOD = 9.74, flag leaf length (R2 = 22%, LOD = 3.05, flag leaf width (R2 = 53%, LOD = 46.5, spikelets per panicle (R2 = 16%, LOD = 13.8, filled grains per panicle (R2 = 22%, LOD = 15.3, percent spikelet sterility (R2 = 18%, LOD = 14.24, thousand grain weight (R2 = 25%, LOD = 12.9 and spikelet setting density (R2 = 23%, LOD = 15 expressing over two or more locations by using composite interval mapping. The phenotypic variation (R2 ranged from 8 to 53% for eleven QTLs expressing across all three locations. 19 novel QTLs were contributed by the NPT parent, Pusa1266. 15 QTL hotpots on eight chromosomes were identified for the correlated traits. Six epistatic QTLs effecting five traits at two locations were identified. A marker interval (RM3276-RM5709 on chromosome 4 harboring major QTLs for four traits was identified. Conclusions The present study reveals that favourable alleles for

  16. GENE FLOW BETWEEN RED RICE AND CULTIVATED RICE ESTIMATED BY MICROSATELLITE MARKERS FLUXO GÊNICO ENTRE ARROZ VERMELHO E ARROZ CULTIVADO ESTIMADO POR MEIO DE MARCADORES MICROSSATÉLITES

    Directory of Open Access Journals (Sweden)

    Francisco , Moura Neto

    2007-09-01

    Full Text Available

    The study aimed to evaluate the capacity of SSR markers to detect the gene flow between the red rice (RR and the cultivated rice (CR. SSR is currently used in plant genomic analysis due to the high information content, to be co-dominant, and based on the PCR reaction. The field experiment was organized in ten concentric circles, 5 m to 50 m apart from a central red rice plant, assumed as the pollen donor. One hundred twenty rice CR plants, cv. BR-Irga 409, were planted in the intersections of the concentric circles and the twelve radii. From 51 SSR markers, four were selected due to their capacity to detect the polymorphism between RR and CR, aiming to identify RR alleles in seeds produced by BR-Irga 409 plants. The maximum distance found for gene flow between RR and CR plants was 10 m from the RR plant. In theory, at 0.1% cross pollination rate, this distance can generate 4,710 hybrids between RR and CR. In the next generation, about 3,532 plants would produce exclusively rice grains with red color. The SSR markers were able to identify the gene flow between RR and CR; therefore, they can be useful to increase the precision of cross pollination rate estimates in rice, mainly if used with other methodologies (e.g., herbicide tolerant plants.

    KEY WORDS: Cross pollination; microsatellite markers; Oryza sativa.

    Este trabalho objetivou avaliar a capacidade de marcadores SSR em detectar a ocorrência de fluxo gênico entre o arroz vermelho (AV e o arroz cultivado (AC. Marcadores SSR são utilizados em análise genômica de plantas devido ao alto conteúdo informativo, serem co-dominantes e baseados na reação de PCR. O ensaio de campo foi realizado em dez círculos concêntricos de 5 m a 50 m de distância, a partir de uma planta AV central, que foi a fonte

  17. Ultrastructure and Gene Mapping of the Albino Mutant al12 in Rice (Oryza sativa L.)%水稻(Oryza sativa L.)苗期低温白化突变体al12的超微结构与基因定位

    Institute of Scientific and Technical Information of China (English)

    夏九成; 王玉平; 马炳田; 殷兆晴; 郝铭; 孔德伟; 李仕贵

    2006-01-01

    Seedling albino mutation resistant to low temperature is an adaptability of rice (Oryza sativa L.) to cold. The mutant, a conditional expression controlled by development and temperature, differs from other albino mutants. The chlorophyll content of the mutant was measured using a portable chlorophyll meter, and the ultrastructure of the chloroplast was observed using a transmission electron microscope. Chlorophyll content was 1.2 SPAD, and the chloroplast did not develop, with only small vesicle-like structures. A segregation analysis of the reciprocal crosses between the albino mutation line with the rice line 9311demonstrated that the albino trait was controlled by a single recessive gene, which was flanked by SSR markers RM5068 and RM3702 on the short arm of chromosome 8 with a distance of 0.5-1.1 cM and 4.9 cM, respectively. This gene was mapped within a 6 cM interval region and was tentatively referred to as all2.%水稻苗期低温白化突变是水稻在发育早期对低温胁迫的一种适应性,是一种受发育和温度控制的条件表达,它与其他水稻白化突变有本质的不同.本研究利用便携式叶绿素测量仪测定了白化时期植株的叶绿素含量和用透射电镜观察了叶绿体的结构变化.结果发现叶绿素平均含量仅为1.2(SPAD),而叶绿体也不能正常发育仅有囊泡状结构.通过与9311的正反交实验及子代的分离表现证明该性状受一个隐性核基因的控制.另外利用SSR分子标记技术将该基因定位在第8染色体上,两侧最近的SSR标记RM5068和RM3702分别距基因0.5~1.1 cM和4.9 cM,基因被定位在约6个cM的区间内.我们将该基因暂时命名为al12.

  18. 水稻和拟南芥中几丁质酶的分析%Chitinases in Oryza sativa ssp. japonica and Arabidopsis thaliana

    Institute of Scientific and Technical Information of China (English)

    许凤华; 范成明; 何月秋

    2007-01-01

    Chitinases (EC3.2.1.14), found in a wide range of organisms, catalyze the hydrolysis of chitin and play a major role in defense mechanisms against fungal pathogens. The alignment and typical domains were analyzed using basic local alignment search tool (BLAST) and simple modular architecture research tool (SMART), respectively. On the basis of the annotations of rice (Oryza sativa L.) and Arabidopsis genomic sequences and using the bio-software SignalP3.0, TMHMM2.0, TargetPl.1, and big-Pi Predictor, 25 out of 37 and 16 out of 24 open reading frames (ORFs) with chitinase activity from rice and Arabidopsis, respectively, were predicted to have signal peptides (SPs), which have an average of 24.8 amino acids at the N-terminal region. Some of the chitinases were secreted extracellularly, whereas some were located in the vacuole. The phylogenic relationship was analyzed with 61 ORFs and 25 known chitinases and they were classified into 6 clusters using Clustal X and MEGA3.1. This classification is not completely consistent when compared with the traditional system that classifies the chitinases into 7 classes. The frequency of distribution of amino acid residues was distinct in different clusters. The contents of alanine, glycine, serine, and leucine were very high in each cluster, whereas the contents of methionine, histidine, tryptophan, and cysteine were lower than 20%. Each cluster had distinct amino acid characteristics. Alanine, valine, leucine, cysteine, serine, and lysine were rich in Clusters Ⅰ to Ⅵ, respectively.%几丁质酶(EC3.2.1.14)是一种降解几丁质的糖苷酶,广泛存在于各种生物体中,并在植物中对病原真菌起重要抗性作用.首先通过BLAST在GenBank中对其同源性进行搜索,用SMART分析其结构.基于水稻和拟南芥的基因组注释,借助4个生物学软件(SignalP3.0,TMHMM2.0,TargetP1.1 and big-Pi Predictor),分析了水稻所有37条和拟南芥所有24条几丁质酶序列,发现有些几丁质酶都分

  19. Melhorias nas propriedades químicas de um solo salino-sódico e rendimento de arroz, sob diferentes tratamentos Improvement in chemical properties of saline-sodic soil and rice yield under under different treatments

    Directory of Open Access Journals (Sweden)

    Everaldo Mariano Gomes

    2000-12-01

    Full Text Available Instalou-se um experimento num solo salino-sódico no Perímetro Irrigado de São Gonçalo, com o objetivo de se avaliar o efeito de diferentes produtos condicionadores nas propriedades químicas do solo e seus reflexos nos componentes de produção e rendimento de grãos na cultura de arroz irrigado (Oryza sativa L.. O delineamento experimental foi inteiramente casualizado, com cinco tratamentos e cinco repetições. Os tratamentos estudados foram: gesso (20 Mg ha-1; casca de arroz (15 Mg ha-1; testemunha; vinhaça (40 m³ ha-1 e esterco de curral (40 Mg ha-1. Após aplicação dos tratamentos, o solo foi lixiviado durante 40 dias, mantendo uma lâmina de 8 cm de água nas parcelas. Os tratamentos mostraram efeitos positivos nas propriedades químicas do solo (percentagem de sódio trocável, condutividade elétrica do extrato de saturação e pH da pasta saturada sendo que o esterco de curral e gesso proporcionaram apreciáveis decréscimos em comparação aos outros tratamentos; entretanto, os produtos utilizados não mostraram efeitos significativos no número de panículas, peso de panículas e rendimento do arroz.An experiment was installed in a saline-sodic soil of the Irrigated Perimeter of São Gonçalo, with the objective of evaluating the effect of different amendments in the chemical properties of soil and its posterior reflexes in the components of production and grain yield of irrigated rice (Oryza sativa L.. The experiment consisted of five treatments with five replications in a completely randomized design. The treatments studied were: gypsum (20 Mg ha-1; rice husk (15 Mg ha-1; control; stillage (40 m³ ha-1 and farmyard manure (40 Mg ha-1. After incorporation of amendments, the soil was leached for 40 days, keeping an 8 cm depth of water in the plots. The treatments showed positive effects in the chemical properties of the soil (exchangeable sodium percentage, electrical conductivity of saturation extract and pH of saturation

  20. Observations on Interspecific Hybridization Barriers Between Oryza sativa and O.brachyantha%亚洲栽培稻与短花药野生稻种间杂交障碍观察

    Institute of Scientific and Technical Information of China (English)

    傅雪琳; 刘向东; 卢永根

    2013-01-01

    亚洲栽培稻Oryza sativa与短花药野生稻O.brachyantha分别属于稻属的AA和FF染色体组,其种间杂交障碍影响了短花药野生稻有利基因向栽培稻的转移利用.本研究利用激光扫描共聚焦显微术对栽培稻与短花药野生稻杂交后杂种胚胎和胚乳发育以及杂种胚囊发育过程进行了观察.结果表明,杂交小穗双受精率高达82.93%,但是杂种胚胎发育到球形胚期停滞并开始解体,游离胚乳核未能正常细胞化而出现解体,导致杂种胚胎在发育中途夭亡,不能形成正常成熟的杂种种子.杂种胚囊发育过程中,大孢子母细胞可进行减数分裂,但形成四分体异常,导致功能大孢子异常,胚囊发育到单核或二核即出现退化现象,最终无法形成正常成熟的胚囊,表现高度的雌性不育.%Oryza sativa and O.brachyantha belong to AA and FF genomes in genus Oryza,respectively.The interspecific hybridization barrier limits the transfer of elite genes from O.brachyantha into O.sativa.By using technique of whole-mount eosin B-staining confocal laser scanning microscopy,the development of hybrid embryo and endosperm after crossing between O.sativa and O.brachyantha and embryo sac abortion process of interspecific hybrid F1 were observed.The results showed that there was a high double-fertilization ratio of 82.93% appearing in the pollinated spikelets,but hybrid embryo ceased to develop and began to degenerate at the globular-shaped stage,meanwhile,free endosperm nuclei degenerated before forming cellular endosperm.It induced hybrid embryo abortion and the matured hybrid seed failed be produced.During the process of hybrid embryo sac development,hybrid megasporocyte finished meioses,but abnormal tetrad was formed which induced abnormal functional megaspores.Embryo sac was degenerated at the stage of mono-nucleate and two-nucleate embryo sac,therefore,no normal embryo sac was formed and hybrid was highly sterile.

  1. Dye characteristics of Zingiber officinale var rubrum, Cinnamomum zaylanicum, Curcuma longa L., Oryza sativa L. Indica in dye sensitized solar cell (DSSC)

    Science.gov (United States)

    Cari; Mahfudli Fadli, U.; Bayu Prasada, A.; Supriyanto, A.

    2017-01-01

    The aims of the research to were know performance of DSSC using the dye of Zingiber, Cinnamomum, Curcuma, and Oryza as a photosensitizer with a variation of dye deposition area with spin coating techniques. The structure of the samples as a sandwich consisting of the working electrode (TiO2), dye, electrodes of platinum (Pt) and the electrolyte sandwiched between two electrodes. Test absorbance dye using UV-Visible Spectrophotometer Lambda 25, using a two-point conductivity test probes El Kahfi 100 and characterization test IV using a Keithley 2602A. For Zingiber results showed that absorbance at 243 nm and 279 nm, photoconductivity of 0.29 Ω-1m-1 and the efficiency is 0.015% on 0.5 cm2. Cinnamomum results showed that absorbance at 253 nm and 403 nm, photoconductivity of 0.11 Ω-1m-1 and the efficiency is 0.002% on 3 cm2. Curcuma results showed that absorbance at 243 nm and 422 nm, photoconductivity of 0.177 Ω-1m-1 and the efficiency is 0.072% on 3 cm2. Oryza results showed that absorbance at 240 nm and 423 nm, photoconductivity of 0.21 Ω-1m-1 and the efficiency is 0.04% on 2.25 cm2. Best absorbance value was obtained from Oryza dye; the highest photoconductivity was obtained from Zingiber dye, and the highest efficiency was obtained from Curcuma dye.

  2. Molecular progress on the mapping and cloning of functional genes for blast disease in rice (Oryza sativa L.): current status and future considerations.

    Science.gov (United States)

    Ashkani, S; Rafii, M Y; Shabanimofrad, M; Ghasemzadeh, A; Ravanfar, S A; Latif, M A

    2016-01-01

    Rice blast disease, which is caused by the fungal pathogen Magnaporthe oryzae, is a recurring problem in all rice-growing regions of the world. The use of resistance (R) genes in rice improvement breeding programmes has been considered to be one of the best options for crop protection and blast management. Alternatively, quantitative resistance conferred by quantitative trait loci (QTLs) is also a valuable resource for the improvement of rice disease resistance. In the past, intensive efforts have been made to identify major R-genes as well as QTLs for blast disease using molecular techniques. A review of bibliographic references shows over 100 blast resistance genes and a larger number of QTLs (∼500) that were mapped to the rice genome. Of the blast resistance genes, identified in different genotypes of rice, ∼22 have been cloned and characterized at the molecular level. In this review, we have summarized the reported rice blast resistance genes and QTLs for utilization in future molecular breeding programmes to introgress high-degree resistance or to pyramid R-genes in commercial cultivars that are susceptible to M. oryzae. The goal of this review is to provide an overview of the significant studies in order to update our understanding of the molecular progress on rice and M. oryzae. This information will assist rice breeders to improve the resistance to rice blast using marker-assisted selection which continues to be a priority for rice-breeding programmes.

  3. Uso da sensitividade à radiação gama na discriminação de variedades de arroz-de-sequeiro dos grupos Índica e Japônica Use of gamma-rays sensitivity for discrimination of upland rice cultivars of groups Indica and Japonica

    Directory of Open Access Journals (Sweden)

    Luís Roberto Franco Rodrigues

    2003-01-01

    Full Text Available Avaliaram-se 65 variedades de arroz-de-sequeiro (Oryza sativa L. quanto à sensitividade à radiação gama. As sementes foram submetidas a sete doses de radiação gama e semeadas em caixas de madeira no delineamento em blocos completos ao acaso com três repetições. O experimento foi desenvolvido em casa de vegetação em 1992. A medida da sensitividade foi efetuada por meio dos efeitos fisiológicos produzidos na geração M1; determinaram-se as percentagens de emergência, sobrevivência e a altura das plântulas. Os resultados mostraram que a sensitividade à radiação gama foi eficiente para discriminar os grupos Índica e Japônica nas dosagens de 300 e 360 Gy.Sixty-five upland rice cultivars (Oryza sativa L. were evaluated in relation to gamma-ray sensitivity. Seeds were subjected to seven doses of gamma-radiation and sown in wooden boxes in randomised complete block design with three replications. The experiment was conducted in greenhouse during the year of 1992. Physiological effects caused by radiation in the M1 generation, were evaluated. The results showed that the sensitivity to the radiation at doses 300 and 360 Gy was useful for distinguishing Indica and Japonica groups.

  4. Evolución el añublo del arroz en dos condiciones de fertilidad nitrogenada Evolução do brusone do arroz em duas condições de adubação nitrogenada Development of rice blast under two nitrogen availability conditions

    Directory of Open Access Journals (Sweden)

    María Pinciroli

    2006-09-01

    Full Text Available Con el objetivo de evaluar la evolución de la infección producida por Pyricularia oryzae (cooke Sacc, en la hoja y en la panícula, fueron seleccionados tres genotipos de arroz (Oryza sativa. Los genotipos: El Paso 144 (EP, Don Ignacio (DI y H 316-1-2-1-1 (H 316 fueron sembrados en condiciones de campo, en la Estación Experimental La Plata, y en dos condiciones de disponibilidad de nitrógeno (testigo o sin nitrógeno y 150 kg N ha-1 en forma de urea. El hongo fue inoculado en la tercera hoja, con una mezcla de razas, a una concentración de 1,2 x 10(5 fragmentos de hifa/ml, incubándose durante 48 horas en cámara húmeda. Fueron evaluados la severidad y tipo de mancha en la hoja y la severidad e incidencia en la panícula. Se realizó el ANOVA, y las diferencias estadísticas fueron analizadas a través del test Tukey (pCom o objetivo de avaliar a evolução da infecção produzida por Pyricularia oryzae (Cooke Sacc, em folha e em panícula, foram selecionados três genótipos de arroz (Oryza sativa. Os genótipos: El Paso 144 (EP, Don Ignacio (DI e H 316-1-2-1-1 (H 316 foram semeados em condições de campo, na Estação Experimental La Plata, e em duas condições de disponibilidade de nitrogênio (testemunha: sem nitrogênio e 150 kg N ha-1 na forma de uréia. O fungo foi inoculado na terceira folha, com uma mistura de raças, e uma concentração de 1,2 x 10(5 fragmentos de hifa/ml, incubando-se durante 48 hs em câmara úmida. Foram avaliadas a severidade e tipo de mancha na folha e severidade e incidência na panícula. Foi realizado ANOVA, e as diferenças estatística foram analizadas pelo teste Tukey (pThree rice genotypes (Oryza sativa were chosen, among some commercial cultivars and advanced lines, in order to evaluate the influence of nitrogen levels on leaf and panicle blast infection caused by Pyricularia grisea (Cooke Sacc. Three genotypes El Paso 144 (EP, Don Ignacio (DI and H 316-1-2-1-1 (H 316 under two nitrogen levels

  5. Acción patogénica de Heterorhabditis bacteriophora (Poinar sobre el caracol manzana (Pomacea canaliculata Lamarck, plaga de los cultivos de arroz (Oriza sativa en la cuenca baja del río Daule, Guayas, Ecuador

    Directory of Open Access Journals (Sweden)

    G. A. Salcedo

    2013-01-01

    Full Text Available Los cultivos de arroz en la cuenca baja del río Daule, Ecuador, son afectados por el caracol manzana. La pérdida estimada es de 40 al 60% de la producción/ha. El agricultor, para evitar pérdidas considerables, aplica agroquímicos en dosis elevadas, desequilibrando la fauna y microfauna nativa, agravando el problema. Razón por la cual, se evaluó la patogenicidad de H. bacteriophora sobre el caracol manzana, con tres dosis; mediante un diseño completamente al azar (DCA con cuatro tratamientos y cinco repeticiones. Los resultados muestran el 100% de mortalidad por septicemia a las 96 horas de la inoculación, con relación al testigo.

  6. Structural determination of elicitors in Sogatella furcifera (Horváth) that induce Japonica rice plant varieties (Oryza sativa L.) to produce an ovicidal substance against S. furcifera eggs.

    Science.gov (United States)

    Yang, Jeong-Oh; Nakayama, Naoya; Toda, Kyohei; Tebayashi, Shinichi; Kim, Chul-Sa

    2014-01-01

    Certain Japonica rice plant varieties (Oryza sativa L.) show resistance to the eggs of the white backed planthopper (Sogatella furcifera Horváth) by the formation of watery lesions and production of benzyl benzoate, an active ovicidal compound. Benzyl benzoate results in high ovicidal activity of S. furcifera eggs and reduces egg hatchability. The production of benzyl benzoate by the rice plants is only induced by an unknown elicitor(s) from the female S. furcifera. Therefore, we tried to isolate and identify these elicitors. An active 80% MeOH extract of S. furcifera was separated on a reverse-phase ODS MPLC, and the elicitor(s) was eluted in 100% MeOH and 100% EtOH fractions. Further separation of the active 100% MeOH fraction using a HPLC led to the isolation of four active compounds. The structures of each compound were determined by using NMR, LC-MS, and GC-MS spectra. The compounds were 1,2-dilinoleoyl-sn-glycero-3-phosphocholine, 1,2-dipalmitoyl-sn-glycero-3-phosphoethanolamine, 1-palmitoyl-2-oleoyl-X-glycero-3-phosphoethanolamine, and 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine.

  7. Validation and Characterization of Ghd7.1, a Major Quantitative Trait Locus with Pleiotropic Effects on Spikelets per Panicle, Plant Height, and Heading Date in Rice (Oryza sativa L.)

    Institute of Scientific and Technical Information of China (English)

    Touming Liu; Haiyang Liu; Huang Zhan; Yongzhong Xing

    2013-01-01

    A quantitative trait locus (QTL) that affects heading date (HD) and the number of spikelets per panicle (SPP) was previously identified in a small region on chromosome 7 in rice (Oryza sativa L.). In order to further characterize the QTL region, near isogenic lines (NILs) were quickly obtained by self-crossing recombinant inbred line 189, which is heterozygous in the vicinity of the target region. The pleiotropic effects of QTL Ghd7.1 on plant height (PH), SPP, and HD, were validated using an NIL-F2 population. Ghd7.1 explained 50.2%, 45.3%, and 76.9%of phenotypic variation in PH, SPP, and HD, respectively. Ghd7.1 was precisely mapped to a 357-kb region on the basis of analysis of the progeny of the NIL-F2 population. Day-length treatment confirmed that Ghd7.1 is sensitive to photoperiod, with long days delaying heading up to 12.5 d. Identification of panicle initiation and development for the pair of NILs showed that Ghd7.1 elongated the photoperiod-sensitive phase more than 10 d, but did not change the basic vegetative phase and the reproductive growth phase. These findings indicated that Ghd7.1 regulates SPP by controlling the rate of panicle differentiation rather than the duration of panicle development.

  8. Expression of Arabidopsis glycine-rich RNA-binding protein AtGRP2 or AtGRP7 improves grain yield of rice (Oryza sativa) under drought stress conditions.

    Science.gov (United States)

    Yang, Deok Hee; Kwak, Kyung Jin; Kim, Min Kyung; Park, Su Jung; Yang, Kwang-Yeol; Kang, Hunseung

    2014-01-01

    Although posttranscriptional regulation of RNA metabolism is increasingly recognized as a key regulatory process in plant response to environmental stresses, reports demonstrating the importance of RNA metabolism control in crop improvement under adverse environmental stresses are severely limited. To investigate the potential use of RNA-binding proteins (RBPs) in developing stress-tolerant transgenic crops, we generated transgenic rice plants (Oryza sativa) that express Arabidopsis thaliana glycine-rich RBP (AtGRP) 2 or 7, which have been determined to harbor RNA chaperone activity and confer stress tolerance in Arabidopsis, and analyzed the response of the transgenic rice plants to abiotic stresses. AtGRP2- or AtGRP7-expressing transgenic rice plants displayed similar phenotypes comparable with the wild-type plants under high salt or cold stress conditions. By contrast, AtGRP2- or AtGRP7-expressing transgenic rice plants showed much higher recovery rates and grain yields compared with the wild-type plants under drought stress conditions. The higher grain yield of the transgenic rice plants was due to the increases in filled grain numbers per panicle. Collectively, the present results show the importance of posttranscriptional regulation of RNA metabolism in plant response to environmental stress and suggest that GRPs can be utilized to improve the yield potential of crops under stress conditions.

  9. Effect of enhanced UV-B radiation and low-energy N⁺ ion beam radiation on the response of photosynthesis, antioxidant enzymes, and lipid peroxidation in rice (Oryza sativa) seedlings.

    Science.gov (United States)

    Li, Linyu; Huang, Qunce; Zhang, Shuyin; Zhao, Shuaipeng

    2013-10-01

    To understand the effect of enhanced UV-B radiation and low-energy N(+) ion beam radiation on the response of photosynthesis, antioxidant enzymes, and lipid peroxidation in rice seedlings, Oryza sativa was exposed to three different doses of low-energy N(+) ion beam and enhanced UV-B alone and in combination. Enhanced UV-B caused a marked decline in some photosynthetic parameters (net photosynthetic rate, transpiration rate, and stomatal conductance) and photosynthetic pigments, whereas it induced an increase in hydrogen peroxide (H2O2) accumulation, the rate of superoxide radical production, and the content of malondialdehyde (MDA). Enhanced UV-B also induced an increase in the activity of antioxidant enzymes (superoxide dismutase [SOD], peroxidase (POD), and catalase [CAT]) and some nonenzymatic antioxidants such as proline. Under the combined treatment of enhanced UV-B and low-energy N(+) ion beam at the dose of 3.0 × 10(17) N(+) cm(-2), the activity of antioxidant compounds (SOD, POD, CAT, proline, and glutathione), photosynthetic pigments, and some photosynthetic parameters (net photosynthetic rate, transpiration rate, and stomatal conductance) increased significantly; however, the MDA content, H2O2 accumulation, and rate of superoxide radical production showed a remarkable decrease compared with the enhanced UV-B treatment alone. These results implied that the appropriate dose of low-energy N(+) ion beam treatment may alleviate the damage caused by the enhanced UV-B radiation on rice.

  10. qEMF3, a novel QTL for the early-morning flowering trait from wild rice, Oryza officinalis, to mitigate heat stress damage at flowering in rice, O. sativa.

    Science.gov (United States)

    Hirabayashi, Hideyuki; Sasaki, Kazuhiro; Kambe, Takashi; Gannaban, Ritchel B; Miras, Monaliza A; Mendioro, Merlyn S; Simon, Eliza V; Lumanglas, Patrick D; Fujita, Daisuke; Takemoto-Kuno, Yoko; Takeuchi, Yoshinobu; Kaji, Ryota; Kondo, Motohiko; Kobayashi, Nobuya; Ogawa, Tsugufumi; Ando, Ikuo; Jagadish, Krishna S V; Ishimaru, Tsutomu

    2015-03-01

    A decline in rice (Oryza sativa L.) production caused by heat stress is one of the biggest concerns resulting from future climate change. Rice spikelets are most susceptible to heat stress at flowering. The early-morning flowering (EMF) trait mitigates heat-induced spikelet sterility at the flowering stage by escaping heat stress during the daytime. We attempted to develop near-isogenic lines (NILs) for EMF in the indica-type genetic background by exploiting the EMF locus from wild rice, O. officinalis (CC genome). A stable quantitative trait locus (QTL) for flower opening time (FOT) was detected on chromosome 3. A QTL was designated as qEMF3 and it shifted FOT by 1.5-2.0 h earlier for cv. Nanjing 11 in temperate Japan and cv. IR64 in the Philippine tropics. NILs for EMF mitigated heat-induced spikelet sterility under elevated temperature conditions completing flower opening before reaching 35°C, a general threshold value leading to spikelet sterility. Quantification of FOT of cultivars popular in the tropics and subtropics did not reveal the EMF trait in any of the cultivars tested, suggesting that qEMF3 has the potential to advance FOT of currently popular cultivars to escape heat stress at flowering under future hotter climates. This is the first report to examine rice with the EMF trait through marker-assisted breeding using wild rice as a genetic resource.

  11. Overexpression of OsKTN80a, a katanin P80 ortholog, caused the repressed cell elongation and stalled cell division mediated by microtubule apparatus defects in primary root in Oryza sativa

    Institute of Scientific and Technical Information of China (English)

    Lei Wan; Xiuwen Wang; Shaoqing Li; Jun Hu; Wenchao Huang; Yingguo Zhu

    2014-01-01

    Katanin, a microtubule-severing enzyme, consists of two subunits:the catalytic subunit P60, and the regulatory subunit P80. In several species, P80 functions in meiotic spindle organization, the flagella biogenesis, the neuronal development, and the male gamete production. However, the P80 function in higher plants remains elusive. In this study, we found that there are three katanin P80 orthologs (OsKTN80a, OsKTN80b, and OsKTN80c) in Oryza sativa L. Overexpression of OsKTN80a caused the retarded root growth of rice seedlings. Further investigation indicates that the retained root growth was caused by the repressed cell elongation in the elongation zone and the stalled cytokinesis in the division zone in the root tip. The in vivo examination suggests that OsKTN80a acts as a microtubule stabilizer. We prove that OsKTN80a, possibly associated with OsKTN60, is involved in root growth via regulating the cell elongation and division.

  12. Characterization of a pollen-preferential gene OSIAGP from rice (Oryza sativa L. subspecies indica) coding for an arabinogalactan protein homologue, and analysis of its promoter activity during pollen development and pollen tube growth.

    Science.gov (United States)

    Anand, Saurabh; Tyagi, Akhilesh K

    2010-06-01

    During differential screening of inflorescence-specific cDNA libraries from Oryza sativa indica, an arabinogalactan protein (OSIAGP) cDNA (586 bp) expressing preferentially in the inflorescence has been isolated. It encodes an arabinogalactan protein of 59 amino acids (6.4 kDa) with a transmembrane domain and a secretory domain at the N terminus. The protein shows homology with AGP23 from Arabidopsis, and its homologue in japonica rice is located on chromosome 6. OSIAGP transcripts also accumulate in shoots and roots of rice seedling grown in the dark, but light represses expression of the gene. Analysis of a genomic clone of OSIAGP revealed that its promoter contains several pollen-specificity and light-regulatory elements. The promoter confers pollen-preferential activity on gus, starting from the release of microspores to anther dehiscence in transgenic tobacco, and is also active during pollen tube growth. Analysis of pollen preferential activity of the promoter in the transgenic rice system revealed that even the approximately 300 bp fragment has activity in pollen and the anther wall and further deletion down to approximately 100 bp completely abolishes this activity, which is consistent with in-silico analysis of the promoter. Arabinogalactan proteins have been shown to be involved in the cell elongation process. The homology of OSIAGP with AGP23 and the fact that seedling growth in the dark and pollen tube growth are events based on cell elongation strengthen the possibility of OSIAGP performing a similar function.

  13. Genetic interactions between diverged alleles of Early heading date 1 (Ehd1) and Heading date 3a (Hd3a)/ RICE FLOWERING LOCUS T1 (RFT1) control differential heading and contribute to regional adaptation in rice (Oryza sativa).

    Science.gov (United States)

    Zhao, Jing; Chen, Hongyi; Ren, Ding; Tang, Huiwu; Qiu, Rong; Feng, Jinglei; Long, Yunming; Niu, Baixiao; Chen, Danping; Zhong, Tianyu; Liu, Yao-Guang; Guo, Jingxin

    2015-11-01

    Initiation of flowering, also called heading, in rice (Oryza sativa) is determined by the florigens encoded by Heading date 3a (Hd3a) and RICE FLOWERING LOCUS T1 (RFT1). Early heading date 1 (Ehd1) regulates Hd3a and RFT1. However, different rice varieties have diverged alleles of Ehd1 and Hd3a/RFT1 and their genetic interactions remain largely unclear. Here we generated three segregating populations for different combinations of diverged Ehd1 and Hd3a/RFT1 alleles, and analyzed their genetic interactions between these alleles. We demonstrated that, in an ehd1 mutant background, Hd3a was silenced, but RFT1 was expressed (although at lower levels than in plants with a functional Ehd1) under short-day (SD) and long-day (LD) conditions. We identified a nonfunctional RFT1 allele (rft1); the lines carrying homozygous ehd1 and Hd3a/rft1 failed to induce the floral transition under SD and LD conditions. Like Hd3a, RFT1 also interacted with 14-3-3 proteins, the florigen receptors, but a nonfunctional RFT1 with a crucial E105K mutation failed to interact with 14-3-3 proteins. Furthermore, analyses of sequence variation and geographic distribution suggested that functional RFT1 alleles were selected during rice adaptation to high-latitude regions. Our results demonstrate the important roles of RFT1 in rice flowering and regional adaptation.

  14. Identification and gene prediction of a 24 kb region containing xa5, a recessive bacterial blight resistance gene in rice (Oryza sativa L.)

    Institute of Scientific and Technical Information of China (English)

    ZHONG Yiming; JIANG Guanghuai; CHEN Xuewei; XIA Zhihui; LI Xiaobing; ZHU Lihuang; ZHAI Wenxue

    2003-01-01

    Rice xa5 gene provides recessive, race-specific resistance to bacterial blight disease caused by the pathogen Xanthomonas oryzae pv. oryzae and has great value for research and breeding. In an effort to clone xa5, an F2 population of 4892 individuals was developed from the xa5 near isogenic lines, IR24 and IRBB5. A fine mapping procedure was conducted and tightly linked RFLP markers were used to screen a BAC library of IRBB56, a resistant rice line containing the xa5 gene. A 213 kb contig covering the xa5 locus was constructed. According to the sequences from the International Rice Genome Sequening Project (IRGSP), the Chinese Superhybrid Rice Genome Project (SRGP) and some sub-clones of the contig, twelve SSLP and CAPS markers were developed for fine mapping. The xa5 gene was mapped to a 0.3 cM interval between markers K5 and T4, which spanned an interval of approximately 24 kb, co-segregating with marker T2. Sequence analysis of the 24 kb region revealed that an ABC transporter and a basal transcription factor (TFIIa) were potential candidates for the xa5 resistance gene product. The molecular mechanism by which the xa5 gene provides recessive, race-specific resistance to bacterial blight will be elucidated by the functional tests of the 24 kb DNA and the candidate genes.

  15. Efeito de diferentes fertilizantes nitrogenados no aumento da produtividade do arroz irrigado Effect of different nitrogen fertilizers on the productivity of flooded rice

    Directory of Open Access Journals (Sweden)

    Norberto Leite

    1970-01-01

    Full Text Available Foi estudado o efeito, na cultura de arroz (Oryza sativa L. irrigado, de diferentes doses e tipos de fertilizantes nitrogenados, bem como a conveniência da construção de diques separando as parcelas. Foram estudados três níveis de nitrogênio e três tipos de fertilizantes, na presença de fósforo e potássio constantes. A variedade utilizada foi a Iguape-agulha. Os dados mostraram grande efeito da adubação nitrogenada, no aumento da produção do arroz. O maior aumento foi apresentado pela torta de mamona, seguida do sulfato de amônio e do nitrocálcio. A presença de diques de separação de canteiros não se mostrou necessária, para evitar a interferência da adubação nitrogenada, em canteiros vizinhos, mesmo utilizando adubos altamente solúveis.A study on the response of flooded rice crops to different kind and doses of nitrogen fertilizers was made. Also the necessity of separating experimental plots with a dike to avoid possible interference among treatments due to solubilization and movement of fertilizers was verified. The experience was carried out at the Experimental Station of Paraíba Valley Service, at Pindamonhangaba, S.P. The fertilizers tested were: castor bean mead, ammonium sulfate and Cal-Nitro in 3 different levels. A constant amount of potassium and phosphorus was applied to all treatments. The rice variety used was Iguape Agulha. Results indicated that there was a significative increase on rice grain production after application of nitrogen fertilizers. Castor bean mead was the most effective in increasing the yield, followed by Ammonium Sulfate and Cal-Nitro. The data also showed that dike construction is unnecessary, because no interference of one treatment on another could be detected.

  16. de precocido del arroz

    Directory of Open Access Journals (Sweden)

    Edilberto Antonio Llanes Cedeño

    2006-01-01

    Full Text Available En el trabajo se realiza un estudio sobre el funcionamiento de la caldera utilizada en las instalaciones de los complejos arroceros de Cuba para el proceso de precocido del arroz, las cuales son alimentadas con combustibles biomásicos (cáscara de arroz. Se evalúa el comportamiento para tres temperaturas del agua de alimentación (27, 60 y 76 0C en cuanto al consumo de combustible, eficiencia energética y el volumen de gases emitidos al medioambiente, auxiliándose del primero y segundo principio de la termodinámica, así como de la metodología soviética para el cálculo de los volúmenes de gases producto de la combustión. Se aprecia cómo para la temperatura de 76 0C disminuye el consumo de combustible, los volúmenes de gases producto de la combustión y aumenta la eficiencia energética.

  17. Molecular Mapping of a New Yellow Green Leaf Gene YGL9 in Rice (Oryza sa-tiva L.)%水稻新黄绿叶基因YGL9的分子定位

    Institute of Scientific and Technical Information of China (English)

    张天泉; 郭爽; 邢亚迪; 杜丹; 桑贤春; 凌英华; 何光华

    2015-01-01

    叶色突变体是研究高等植物光合作用、叶绿素代谢途径、叶绿体结构与功能分子机制的理想材料。本研究从EMS (ethyl methane sulfonate)处理的缙恢10号(Oryza sativa L. ssp. indica)诱变群体中发现了一个苗期呈现黄绿色、抽穗期渐变为淡绿色的叶色突变体,命名为yellow green leaf 9(ygl9)。与野生型相比, ygl9苗期和分蘖期光合色素极显著降低,抽穗期光合色素显著降低,气孔长度、气孔导度和蒸腾速率极显著增加,净光合速率无明显变化。透射电镜观察表明, ygl9的嗜锇小体增多、基粒模糊、基质片层减少且疏松,但叶绿体结构基本完整。遗传分析显示该突变性状受1对隐性核基因调控。利用西农1A/ygl9 F2群体中的759株隐性单株,最终将 YGL9定位在第3染色体短臂SSR标记S03-1和InDel标记Ind03-19之间,遗传距离分别为0.13 cM和0.07 cM,物理距离为63 kb。本研究为YGL9基因的克隆和功能分析奠定了基础。%Leaf color mutants are ideal materials in illuminating molecular mechanism of photosynthesis, chlorophyll metabolic pathway and chloroplast development. A novel mutant named yellow green leaf 9 (ygl9) was isolated from the progeny of ethyl methane sulfonate (EMS) treated Jinhui10 (Oryza sativa L. ssp. indica) and displayed yellow-green leaves at the seedling stage while light green at the heading stage. Compared with those of the wild type, the photosynthetic pigments of the ygl9 mutant re-duced very significantly before the tillering stages and significantly in the heading stage. However, there was no obvious changing for net photosynthetic rate between the wild type and the mutant. The characteristics of stomata length, stomatal conductance and transpiration rate increased significantly in the ygl9. The observation by transmission electron microscope showed that the ygl9 mutant contained comparable chloroplasts with more osmiophilic granules, fuzzy grana and fewer

  18. Uncovering a Nuisance Influence of a Phenological Trait of Plants Using a Nonlinear Structural Equation: Application to Days to Heading and Culm Length in Asian Cultivated Rice (Oryza Sativa L.).

    Science.gov (United States)

    Onogi, Akio; Ideta, Osamu; Yoshioka, Takuma; Ebana, Kaworu; Yamasaki, Masanori; Iwata, Hiroyoshi

    2016-01-01

    Phenological traits of plants, such as flowering time, are linked to growth phase transition. Thus, phenological traits often influence other traits through the modification of the duration of growth period. This influence is a nuisance in plant breeding because it hampers genetic evaluation of the influenced traits. Genetic effects on the influenced traits have two components, one that directly affects the traits and one that indirectly affects the traits via the phenological trait. These cannot be distinguished by phenotypic evaluation and ordinary linear regression models. Consequently, if a phenological trait is modified by introgression or editing of the responsible genes, the phenotypes of the influenced traits can change unexpectedly. To uncover the influence of the phenological trait and evaluate the direct genetic effects on the influenced traits, we developed a nonlinear structural equation (NSE) incorporating a nonlinear influence of the phenological trait. We applied the NSE to real data for cultivated rice (Oryza sativa L.): days to heading (DH) as a phenological trait and culm length (CL) as the influenced trait. This showed that CL of the cultivars that showed extremely early heading was shortened by the strong influence of DH. In a simulation study, it was shown that the NSE was able to infer the nonlinear influence and direct genetic effects with reasonable accuracy. However, the NSE failed to infer the linear influence in this study. When no influence was simulated, an ordinary bi-trait linear model (OLM) tended to infer the genetic effects more accurately. In such cases, however, by comparing the NSE and OLM using an information criterion, we could assess whether the nonlinear assumption of the NSE was appropriate for the data analyzed. This study demonstrates the usefulness of the NSE in revealing the phenotypic influence of phenological traits.

  19. Short-chain chlorinated paraffins in soil, paddy seeds (Oryza sativa) and snails (Ampullariidae) in an e-waste dismantling area in China: Homologue group pattern, spatial distribution and risk assessment.

    Science.gov (United States)

    Yuan, Bo; Fu, Jianjie; Wang, Yawei; Jiang, Guibin

    2017-01-01

    Short-chain chlorinated paraffins (SCCPs) in multi-environmental matrices are studied in Taizhou, Zhejiang Province, China, which is a notorious e-waste dismantling area. The investigated matrices consist of paddy field soil, paddy seeds (Oryza sativa, separated into hulls and rice unpolished) and apple snails (Ampullariidae, inhabiting the paddy fields). The sampling area covered a 65-km radius around the contamination center. C10 and C11 are the two predominant homologue groups in the area, accounting for about 35.7% and 33.0% of total SCCPs, respectively. SCCPs in snails and hulls are generally higher than in soil samples (30.4-530 ng/g dw), and SCCPs in hulls are approximate five times higher than in corresponding rice samples (4.90-55.1 ng/g dw). Homologue pattern analysis indicates that paddy seeds (both hull and rice) tend to accumulate relatively high volatile SCCP homologues, especially the ones with shorter carbon chain length, while snails tend to accumulate relatively high lipophilic homologues, especially the ones with more substituted chlorines. SCCPs in both paddy seeds and snails are linearly related to those in the soil. The e-waste dismantling area, which covers a radius of approximate 20 km, shows higher pollution levels for SCCPs according to their spatial distribution in four matrices. The preliminary assessment indicates that SCCP levels in local soils pose no significant ecological risk for soil dwelling organisms, but higher risks from dietary exposure of SCCPs are suspected for people living in e-waste dismantling area.

  20. RNAi-directed downregulation of betaine aldehyde dehydrogenase 1 (OsBADH1) results in decreased stress tolerance and increased oxidative markers without affecting glycine betaine biosynthesis in rice (Oryza sativa).

    Science.gov (United States)

    Tang, Wei; Sun, Jiaqi; Liu, Jia; Liu, Fangfang; Yan, Jun; Gou, Xiaojun; Lu, Bao-Rong; Liu, Yongsheng

    2014-11-01

    As an important osmoprotectant, glycine betaine (GB) plays an essential role in resistance to abiotic stress in a variety of organisms, including rice (Oryza sativa L.). However, GB content is too low to be detectable in rice, although rice genome possesses several orthologs coding for betaine aldehyde dehydrogenase (BADH) involved in plant GB biosynthesis. Rice BADH1 (OsBADH1) has been shown to be targeted to peroxisome and its overexpression resulted in increased GB biosynthesis and tolerance to abiotic stress. In this study, we demonstrated a pivotal role of OsBADH1 in stress tolerance without altering GB biosynthesis capacity, using the RNA interference (RNAi) technique. OsBADH1 was ubiquitously expressed in different organs, including roots, stems, leaves and flowers. Transgenic rice lines downregulating OsBADH1 exhibited remarkably reduced tolerance to NaCl, drought and cold stresses. The decrease of stress tolerance occurring in the OsBADH1-RNAi repression lines was associated with an elevated level of malondialdehyde content and hydrogen peroxidation. No GB accumulation was detected in transgene-positive and transgene-negative lines derived from heterozygous transgenic T0 plants. Moreover, transgenic OsBADH1-RNAi repression lines showed significantly reduced seed set and yield. In conclusion, the downregulation of OsBADH1, even though not causing any change of GB content, was accounted for the reduction of ability to dehydrogenate the accumulating metabolism-derived aldehydes and subsequently resulted in decreased stress tolerance and crop productivity. These results suggest that OsBADH1 possesses an enzyme activity to catalyze other aldehydes in addition to betaine aldehyde (the precursor of GB) and thus alleviate their toxic effects under abiotic stresses.

  1. Mapping and introgression of QTL for yield and related traits in two backcross populations derived from Oryza sativa cv. Swarna and two accessions of O. nivara

    Indian Academy of Sciences (India)

    B. P. Mallikarjuna Swamy; K. Kaladhar; G. Ashok Reddy; B. C. Viraktamath; N. Sarla

    2014-12-01

    Advanced backcross QTL (AB-QTL) analysis was carried out in two Oryza nivara-derived BC2F2 populations. For nine traits, we identified 28 QTL in population 1 and 26 QTL in population 2. The two most significant yield-enhancing QTL, yldp9.1 and yldp2.1 showed an additive effect of 16 and 7 g per plant in population 1, while yld2.1 and yld11.1 showed an additive effect of 11 and 10 g per plant in population 2. At least one O. nivara-derived QTL with a phenotypic variance of >15% was detected for seven traits in population 1 and three traits in population 2. The O. nivara-derived QTL ph1.1, nt12.1, nsp1.1, nfg1.1, bm11.1, yld2.1 and yld11.1 were conserved at the same chromosomal locations in both populations. Two major QTL clusters were detected at the marker intervals RM488–RM431 and RM6–RM535 on chromosomes 1 and 2, respectively. The colocation of O. nivara-derived yield QTL with yield meta-QTL on chromosomes 1, 2 and 9 indicates their accuracy and consistency. The major-effect QTL reported in this study are useful for marker-assisted breeding and are also suitable for further fine mapping and candidate gene identification.

  2. Mapping QTLs for Fertility Restoration of Different Cytoplasmic Male Sterility Types in Rice Using Two Oryza sativa ×O. rufipogon Backcross Inbred Line Populations

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    Biao-lin Hu

    2016-01-01

    Full Text Available Hybrid rice breeding using cytoplasmic male sterility/fertility restoration (CMS/Rf systems plays an important role in ensuring global food security. Two backcross inbred line (BIL populations derived from either Xieqingzao B (XB//XB/Dongxiang wild rice (DWR (XXD or XB//DWR/XB (XDX were used to detect quantitative trait loci (QTLs for fertility restoration of Dwarf wild abortive- (DA-, Indonesia Paddy- (ID-, and DWR-type CMS in rice. Lines with ID- and DA-type CMS were testcrossed with both the XXD- and XDX-BILs, while the line with DWR-type CMS was testcrossed with the XDX-BILs only. A total of 16 QTLs for fertility restoration of CMS systems were identified, including three for DWR-type CMS, six for DA-type CMS, and seven for ID-type CMS. All of the additive alleles in the QTLs were derived from Oryza rufipogon. Eleven QTLs were clustered in five chromosomal regions, indicating that common Rf loci restored different CMS systems, and the favorable O. rufipogon alleles could be used to develop restorer lines for various CMS types by marker-assisted selection.

  3. Characterization of Anatomical, Chemical, and Biodegradable Properties of Fibers from Corn, Wheat, and Rice Residues Caracterización de Propiedades Anatómicas, Químicas y de Biodegradación de Fibras Provenientes de Residuos de Maíz, Trigo y Arroz

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    Rose Marie Garay M

    2009-09-01

    Full Text Available Anatomical, chemical, and biodegradation properties of fibers from wheat (Triticum aestivum L., rice (Oryza sativa L., and corn (Zea mays L. plant residues and from rice hull were characterized to generate scientific and technical knowledge to support decision making regarding their use. The anatomical and chemical properties were determined following standard procedures. The degree of biodeterioration was analyzed from growth of white rot fungus Pleurotus ostreatus (Jaq. Quél. in 30 d under favorable conditions. Afterwards, weight loss was evaluated for each residue. Three replicates were used, plus a control of radiata pine (Pinus radiata D. Don woodchips. The greatest proportion of a-cellulose was found in residues of rice plants (45.1%, with a high amount of extractable (non-structural components, that confer organoleptic characteristics, followed by rice hull (22.78%, which is explained by the presence of silica in their cells. Ash content was higher in wheat residues, reaching up to 18.34%. Anatomical characteristics were studied to corroborate potential use in industrial processes. Fiber length and wall thickness were similar to those of latifoliate wood fibers, although possibly less resistant because of lower lignification. The largest weight loss was from rice plant (32%, followed by rice hull (27%, and corn plants (26.6%. The most resistant was wheat plant (15.8%. All these materials had greater weight losses than the control sample (3.8%. Thus, given their anatomical and chemical properties, the use of plant residue fibers in industrial processes is technically possible, though with concern about their biodegradability.Se caracterizaron las propiedades anatómicas, químicas y biodegradación de fibras de residuos de plantas de trigo (Triticum aestivum L., plantas de arroz (Oryza sativa L., plantas de maíz (Zea mays L., y cáscara de arroz, con el objetivo de generar información y tomar decisiones de uso con bases científicas y

  4. EFECTO DE BAJOS SUMINISTROS DE AGUA EN EL COMPORTAMIENTO AGRONÓMICO E INDUSTRIAL DE NUEVOS GENOTIPOS DE ARROZ (Oryza sativa L. OBTENIDOS POR DIFERENTES MÉTODOS DE MEJORA

    Directory of Open Access Journals (Sweden)

    Elizabeth Cristo

    2012-01-01

    genotipos 8554 y la variedad Reforma, mostraron excelente comportamiento en cuanto al rendimiento agrícola e industrial, así como a las principales enfermedades que afectan económicamente a este cultivo, como es el caso del manchado del grano.

  5. Herbicidas não seletivos aplicados na fase de maturação do arroz irrigado Non-selective herbicides applied at the maturity phase of flooded rice

    Directory of Open Access Journals (Sweden)

    Dirceu Agostinetto

    2001-06-01

    Full Text Available Um dos principais fatores limitantes da exploração do potencial máximo de rendimento do arroz irrigado é a interferência exercida pelo arroz vermelho, uma gramínea daninha. Botanicamente, ambos pertencem a mesma espécie (Oryza sativa L., o que limita a utilização de herbicidas seletivos para seu controle. Com o objetivo de investigar os efeitos de herbicidas não seletivos, aplicados na fase de maturação do arroz cultivado, sobre características agronômicas da cultura, conduziu-se dois experimentos a campo nas estações de crescimento de 1997/98 e 1998/99, e avaliações em laboratório. Os tratamentos compararam os herbicidas glyphosate, glufosinate e paraquat, aplicados em duas doses e duas épocas, além do regulador de crescimento hidrazida maléica, aplicada também em duas épocas, e testemunha não tratada. Como cultivar de arroz foi utilizada a IRGA-416, de ciclo precoce. As demais práticas de manejo foram aquelas preconizadas para a cultura, a qual desenvolveu-se na presença de arroz vermelho. Avaliaram-se as características do arroz cultivado, rendimento de grãos e seus componentes, rendimento de engenho e antecipação da colheita. Os herbicidas não seletivos glyphosate, glufosinate e paraquat, quando aplicados na fase de maturação fisiológica do arroz cultivado, em geral não afetam negativamente as características agronômicas da cultura e apresentam efeitos equivalentes aos do regulador de crescimento hidrazida maléica. Variações de doses e épocas de aplicação geralmente não se diferenciam quanto à ação. A ação dessecante dos herbicidas apressa a redução da umidade dos grãos de arroz e permite antecipar a colheita. A partir do estádio em que os grãos de arroz cultivado atingem teor de umidade de 34%, o regulador de crescimento hidrazida maléica não afeta negativamente as características da cultura.One of the major limiting factor for increasing flooded rice yield potential is the

  6. Physiological analysis of leaf senescence of two rice cultivars with different yield potential Análise fisiológica da senescência foliar de duas cultivares de arroz com diferentes potenciais de produtividade

    Directory of Open Access Journals (Sweden)

    Antelmo Ralph Falqueto

    2009-07-01

    Full Text Available The objective of this work was to evaluate the physiological changes that occur in different leaves during the early and late grain-filling stages of two rice genotypes (Oryza sativa subsp. indica , BRS Pelota cultivar, and O. sativa subsp. japonica , BRS Firmeza cultivar, which present differences in grain yield potential. The plants were cultivated in greenhouse. Pigment content, chlorophyll fluorescence, electron transport and oxygen evolution rate were determined in the grain-filling stage, from the first to the forth leaf (top to bottom. Pigment content, photochemical efficiency of photosystem II and electron transport decreased significantly according to the position of leaves in 'BRS Pelota'. The BRS Firmeza cultivar shows higher pigment content and higher activity of the photosynthetic apparatus in comparison to 'BRS Pelota' during the grain-filling stage.O objetivo deste trabalho foi avaliar as mudanças fisiológicas que ocorrem em diferentes folhas durante o início e o final do estádio de enchimento de grãos em dois genótipos de arroz (Oryza sativa subsp. indica cultivar BRS Pelota e O. sativa subsp. japonica cultivar BRS Firmeza que apresentam diferenças no potencial de produção de grãos. As plantas foram cultivadas em casa de vegetação. Os teores de pigmentos, a fluorescência da clorofila e a taxa de liberação de oxigênio foram determinados no estádio de enchimento de grão da primeira à quarta folha (do topo à base. O teor de pigmentos, a eficiência fotoquímica do fotossistema II e o transporte de elétrons decresceram significativamente de acordo com a posição das folhas na cultivar BRS Pelota. A cultivar BRS Firmeza apresentou maior teor de pigmentos e maior atividade do aparato fotossintético em comparação à 'BRS Pelota' durante o estádio de enchimento de grão.

  7. del arroz en Cuba

    Directory of Open Access Journals (Sweden)

    Pedro Paneque Rondón

    2006-01-01

    Full Text Available El objetivo fundamental del trabajo fue determinar el costo energético de la cosecha mecanizada del arroz y comparar los costos energéticos de los distintos tamaños (anchos de trabajo de los equipos más utilizados en el país para la cosecha, testando la hipótesis de que el costo energético expresado en MJ/ha es independiente del tamaño del equipo. Los resultados de la investigación permitieron llegar a las conclusiones siguientes: la máquina que mayor costo energético presentó fue la NEW HOLLAND L – 624 y la menor fue la IDEAL 9070 con valores medios de 2 590 MJ/ha y 1 864 MJ/ha respectivamente. Los costos energéticos horarios (MJ/h dependen del tamaño de las máquinas pero los costos por área trabajada (MJ/ha o masa procesada (MJ/t son independientes de dicho tamaño.

  8. Whole-plant dynamic system of nitrogen use for vegetative growth and grain filling in rice plants (Oryza sativa L. as revealed through the production of 350 grains from a germinated seed over 150 days: a review and synthesis

    Directory of Open Access Journals (Sweden)

    Tadakatsu Yoneyama

    2016-08-01

    Full Text Available A single germinated rice (Oryza sativa L seed can produce 350 grains with the sequential development of 15 leaves on the main stem and 7 ‒ 10 leaves on 4 productive tillers (forming 5 panicles in total, using nitrogen (N taken up from the environment over a 150-day growing season. Nitrogen travels from uptake sites to the grain through growing organ-directed cycling among sequentially developed organs. Over the past 40 years, the dynamic system for N allocation during vegetative growth and grain filling has been elucidated through studies on N and 15N transport as well as enzymes and transporters involved. In this review, we synthesize the information obtained in these studies along the following main points: (1 During vegetative growth before grain-filling, about half of the total N in the growing organs, including young leaves, tillers, root tips and differentiating panicles is supplied via phloem from mature source organs such as leaves and roots, after turnover and remobilization of proteins, whereas the other half is newly taken up and supplied via xylem, with an efficient xylem-to-phloem transfer at stem nodes. Thus, the growth of new organs depends equally on both N sources. (2 A large fraction (as much as 80% of the grain N is derived largely from mature organs such as leaves and stems by degradation, including the autophagy pathway of chloroplast proteins (e.g., Rubisco. (3 Mobilized proteinogenic amino acids, including arginine, lysine, proline and valine, are derived mainly from protein degradation, with amino acid transporters playing a role in transferring these amino acids across cell membranes of source and sink organs, and enabling their efficient reutilization in the latter. On the other hand, amino acids such as glutamine, glutamic acid, γ-amino butyric acid, aspartic acid, and alanine are produced by assimilation of newly taken up N by roots and transported via xylem and phloem. The formation of 350 filled grains over 50

  9. Whole-Plant Dynamic System of Nitrogen Use for Vegetative Growth and Grain Filling in Rice Plants (Oryza sativa L.) as Revealed through the Production of 350 Grains from a Germinated Seed Over 150 Days: A Review and Synthesis.

    Science.gov (United States)

    Yoneyama, Tadakatsu; Tanno, Fumio; Tatsumi, Jiro; Mae, Tadahiko

    2016-01-01

    A single germinated rice (Oryza sativa L) seed can produce 350 grains with the sequential development of 15 leaves on the main stem and 7-10 leaves on four productive tillers (forming five panicles in total), using nitrogen (N) taken up from the environment over a 150-day growing season. Nitrogen travels from uptake sites to the grain through growing organ-directed cycling among sequentially developed organs. Over the past 40 years, the dynamic system for N allocation during vegetative growth and grain filling has been elucidated through studies on N and (15)N transport as well as enzymes and transporters involved. In this review, we synthesize the information obtained in these studies along the following main points: (1) During vegetative growth before grain-filling, about half of the total N in the growing organs, including young leaves, tillers, root tips and differentiating panicles is supplied via phloem from mature source organs such as leaves and roots, after turnover and remobilization of proteins, whereas the other half is newly taken up and supplied via xylem, with an efficient xylem-to-phloem transfer at stem nodes. Thus, the growth of new organs depends equally on both N sources. (2) A large fraction (as much as 80%) of the grain N is derived largely from mature organs such as leaves and stems by degradation, including the autophagy pathway of chloroplast proteins (e.g., Rubisco). (3) Mobilized proteinogenic amino acids (AA), including arginine, lysine, proline and valine, are derived mainly from protein degradation, with AA transporters playing a role in transferring these AAs across cell membranes of source and sink organs, and enabling their efficient reutilization in the latter. On the other hand, AAs such as glutamine, glutamic acid, γ-amino butyric acid, aspartic acid, and alanine are produced by assimilation of newly taken up N by roots and and transported via xylem and phloem. The formation of 350 filled grains over 50 days during the

  10. cDNA微阵列检测水稻幼苗空间特异表达基因%Identifying the Spatial Specifically Expressed Genes in Rice ( Oryza sativa ) Seedlings by Using cDNA Microarray

    Institute of Scientific and Technical Information of China (English)

    孙亮先; 董海涛; 庄晓峰; 张峰; 李德葆

    2003-01-01

    以含有2 200个独立水稻转录本的膜质cDNA微阵列鉴别萌发期水稻(Oryza sativa L.)幼苗的空间特异表达基因.经比较表达谱,得到了在胚芽、胚轴和胚根中特异表达的基因分别为31、36和73个.其中,胚轴特异表达基因包括聚泛蛋白、UDP-葡萄糖焦磷酸酶、蔗糖合酶、磷酸甘油酸激酶等参与糖、蛋白质代谢反应的蛋白,意味着在萌发期水稻幼苗中,胚乳贮藏淀粉和贮藏蛋白的降解反应主要发生在胚轴部.实验检测到的胚芽和胚根特异表达基因包括一些具有防御功能的基因及多个参与复制、转录和翻译过程的基因,如胚芽特异表达的基因中,翻译起始因子5a、40s核糖体蛋白s28及核糖体蛋白136与蛋白合成有关;而过敏性蛋白、β-D-葡聚糖外水解酶和肌动蛋白-11等为抗病相关基因.胚根特异表达的基因中,肽链延伸因子1-α、TATA盒结合蛋白、DNA复制蛋白A2、组蛋白和两种核糖体蛋白等与复制、转录和翻译有关;而富含甘氨酸蛋白、创伤诱导性碱性蛋白、Bowman-Birk蛋白酶抑制因子、脂类转运蛋白-2等基因则与幼苗的防卫反应有关.通过分析这些空间特异表达基因,揭示出一些潜在的生物学规律,为研究萌发生理学提供了有价值的信息.

  11. El origen africano del cultivo del arroz en Las Américas

    Directory of Open Access Journals (Sweden)

    Carney, Judith A.

    2015-06-01

    Full Text Available Until the period of the transatlantic slave trade, rice was not cultivated in the Americas. By the eighteenth century the crop was widely established across plantation societies from South Carolina to Brazil. Grown by slaves as well as maroons, for subsistence and also for export, the onset of rice cultivation in the Americas has long been attributed to European planters. This article presents evidence that supports African agency in establishing rice culture in the New World. Emphasis is on African rice (Oryza glaberrima, enslaved West Africans for whom the crop was a dietary staple, and an indigenous rice knowledge system with identical features across the African and American Atlantic. A comparative analysis of land use, methods of cultivation, milling and cooking traditions illuminates the diffusion of African rice culture to the Americas and the role of West African slaves in pioneering rice as a New World subsistence staple.El arroz no empezó a ser cultivado en las Américas sino hasta el periodo del comercio transatlántico de esclavos. Para el siglo XVIII este cultivo ya se había establecido extensamente en plantaciones desde Carolina del Sur hasta Brasil. Cultivado por esclavos así como cimarrones, tanto para la subsistencia como para la exportación, el comienzo de la cultivación de arroz en las Américas invariablemente se ha atribuido a los dueños de plantaciones europeos. Este artículo presenta evidencia del importante papel que desempeñaron los africanos en establecer la cultura del arroz en el Nuevo Mundo. Este trabajo se enfoca sobre el arroz africano (Oryza glaberrima, personas esclavizadas de África occidental para quienes este cultivo era un alimento básico, y un sistema de conocimiento indígena sobre el arroz con características idénticas entre el Atlántico africano y americano. Un estudio comparativo de usos del suelo, métodos de cultivo, procesos de molienda y tradiciones culinarias ilumina el tema de la

  12. Effects of Biofertilizers Combined with Different Soil Amendments on Potted Rice Plants Efecto de Biofertilizantes Combinado con Enmiendas del Suelo sobre Plantas de Arroz en Macetas

    Directory of Open Access Journals (Sweden)

    Arshad Javaid

    2011-03-01

    Full Text Available This pot study investigated the effect of the combined application of two commercial biofertilizers viz. Biopower and EM (Effective Microorganisms on rice (Oryza sativa L. growth and yield in soils amended with farmyard manure, green manure, and NPK fertilizers. Biopower is a product of the Nuclear Institute for Biotechnology and Genetic Engineering (NIBGE, Pakistan, which contains species of associative and endophytic diazotrophs. EM (effective microorganisms, a product developed by Japanese scientists, consists of co-existing beneficial microorganisms, mainly species of photosynthetic and lactic acid bacteria, as well as yeast. Applying Biopower adversely affected plant growth and yield in NPK fertilizer amendment. Conversely, this biofertilizer markedly enhanced plant growth and yield in green manure amended soil while its effect was not significant in farmyard manure amendment. In green manure amendment, applying EM enhanced grain yield by 46%. Co-inoculation of Biopower and EM evidently improved root and shoot growth in farmyard manure amended soil. This study concludes that the two biofertilizers clearly enhanced shoot biomass and grain yield in green manure amended soils.El presente estudio en macetas fue realizado para investigar el efecto de la aplicación combinada de dos biofertilizantes comerciales, Biopower y EM (Effective Microorganisms, en el crecimiento y producción de arroz (Oryza sativa L. en suelos enmendados con estiércol de granja, abono verde y fertilizantes NPK. Biopower es un producto del Nuclear Institute for Biotechnology and Genetic Engineering (NIBGE, Pakistán, que contiene especies de diazótrofos asociativos y endofíticos. Effective Microorganisms es un producto desarrollado por científicos japoneses que consiste en microorganismos benéficos co-existentes, principalmente especies de bacterias fotosintéticas y ácido lácticas, y levadura. La aplicación de Biopower afectó adversamente el crecimiento y

  13. Viabilidad de semillas de arroz provenientes de plantas obtenidas in vitro

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    Maylin Pérez-Bernal

    2013-04-01

    Full Text Available Se evaluó la viabilidad de semillas de arroz índica (Oryza sativa L. variedad IACuba-28 provenientes de plantas cultivadas in vitro. Dichas semillas fueron conservadas en bolsas de plástico durante 0, 2, 5, 7, 9 y 12 años en un banco de semillas a 4 °C y 34% de humedad relativa. La prueba de germinación se realizó en una muestra aleatoria de las accesiones A2000, A2003, A2005, A2007, A2010, A2012 y como prueba bioquímica se determinó la actividad alfa-amilasa en las semillas en germinación. En ambas determinaciones se incluyeron controles positivos con semillas nuevas obtenidas de plantas cultivadas en campo. Se halló una reducción progresiva del porcentaje de germinación, a medida que aumentó el tiempo de conservación en banco de germoplasma, así, a los 12 años de conservación se dio el mayor número de semillas muertas, contaminadas y plantas anormales. En todas las accesiones se observó un aumento de la actividad alfa-amilasa hasta el quinto día de germinación para luego disminuir, encontrando diferencias (P < 0.05 entre accesiones jóvenes y antiguas. La actividad alfaamilasa promedio en el quinto día de germinación fue de 0.25 en las accesiones con menor tiempo de almacenamiento, mientras que en las más antiguas fue de 0.192. La diferencia más marcada se observó en la accesión almacenada por 12 años, donde el pico de actividad sólo llegó a 0.0614. Este estudio demostró que las semillas provenientes de cultivo in vitro mantienen su viabilidad durante 10 años de almacenamiento en las condiciones del estudio; transcurrido este tiempo se perciben cambios desfavorables en los parámetros de germinación y en los niveles de la actividad alfa-amilasa.

  14. Influência de sais e do pH da água na eficiência de imazethapyr + imazapic no controle de arroz-vermelho Influence of salts and water pH on the efficiency of imazethapyr + imazapic for red rice control

    Directory of Open Access Journals (Sweden)

    D.M. Sanchotene

    2007-01-01

    Full Text Available Na safra agrícola de 2004/2005, em Santa Maria/RS, foi realizado um experimento com o objetivo de avaliar a influência de sais e do pH da água de diferentes fontes de abastecimento de pulverizadores (água de fonte mineral, água de açude e água de poço artesiano sobre a eficiência de imazethapyr (75 g L-1 + imazapic (25 g L-1 no controle de arroz-vermelho (Oryza sativa. No preparo da calda para pulverização do herbicida, foi utilizada água na sua condição original e água acidificada com ácido cítrico até pH 4,5. Foi verificado que os tratamentos com água de pH 4,5 proporcionaram maior eficiência da mistura (imazethapyr + imazapic no controle do arroz-vermelho do que com águas alcalinas (pH 9,4 e 8,7. Todos os tratamentos herbicidas causaram intoxicação às plantas do arroz cultivado. Entretanto, nos tratamentos em que se utilizou água alcalina, foi observada recuperação mais rápida das plantas de arroz, cultivar IRGA 422 CL.This research was carried out in Santa Maria/RS during the 2004/2005 crop season to evaluate the influence of salts and water pH on different sources of spray suppliers (mineral water, dam water and artesian well water on imazethapyr (75 g L-1 + imazapic (25 g L-1 efficiency in red rice control. Thus, water under original condition and acidified water with citric acid to pH 4,5 have been used to prepare the herbicide solutions. It has been verified that the treated plots with water at pH 4,5 showed better action of imazethapyr (75 g L-1 + imazapic (25 g L-1 in the red rice control than alkaline water with pH 9,4 and 8,7. All the treatments with herbicide presented intoxication in the rice. Nevertheless, the treatments with alkaline water showed a fast recuperation in rice plants (IRGA 422CL.

  15. 空心莲子草水浸提液对水稻根缘细胞的化感作用%Allelopathic Effect of Aqueous Extracts of Alternanthera philoxeroides on Root Border Cells of Oryza sativa

    Institute of Scientific and Technical Information of China (English)

    王桂芹; 郑玉华; 张晓娟

    2012-01-01

    采用悬空气法研究了空心莲子草水浸提液对水稻根缘细胞的化感作用。结果表明,空心莲子草水浸提液对水稻根源细胞有明显的抑制及伤害作用。空心莲子草不同器官的水浸提液对水稻根源细胞存活率的影响不同:叶浸浸提液的抑制作用最强,当浓度在0.1g/mL时水稻根边缘细胞存活率仅为21.6%;根和根状茎次之;茎的作用最弱。水稻根源细胞存活率均与处理浓度存在量效关系,呈现随处理浓度的增加而降低。空心莲子草不同器官的水提浸液对水稻根冠PME酶的活性的促进效应不同,叶、根和根状茎浸提液随着处理浓度的增加表现为先升高后降低的趋势,茎则呈现与根和根状茎及叶的处理结果相反的变化趋势。空心莲子草不同器官水浸提液的综合化感效应表现为:叶〉根和根状茎〉茎。%Allelopathic effect of aqueous extracts from invasive plant Alternanthera philoxeroides on Oryza sativa' s root border cells was studied by aeroponie culture. The results showed that water -solubility allelopathic sub- stance of A. philoxeroides inhibites and damages root border cells of rice obviously, and the effect extent depends on the vegetative parts of A. philoxeroides from which the aqueous extracts was extracted. The aqueous extracts from leaves have the strongest allelopathic effect, with the survival rate only being 21.6% when the concentra- tions are at 0.1 g/mL, while those from stem have the weakest allelopathic effect. It appears that dose - response relationship between the survival rate of root border cells and concentrations of aqueous extracts, increased, as the survival rate decreased. The aqueous extracts from different parts of A. philoxeroides has different activity to pectin methylesterase in the root cap, The aqueous extracts of leaves, roots and rhizome first stimulated the pec- tin methylesterase (PME) activity as the concentrations

  16. 镁钾配施对寒地水稻产量的影响%Effects of Rational Ratio of Magnesium and Potassium on Yield of Rice(Oryza sativa L.) in Cold Region

    Institute of Scientific and Technical Information of China (English)

    王安东; 郑桂萍; 慕永红; 刘婧琦; 孔宇; 隋阳辉; 解保胜

    2012-01-01

    [Objective] The purpose was to study the effects of rational ratio of magnesium and potassium on yield of rice in cold region, to confirm suitable ration of magnesium and potassium. [Method] Kongyu 131 was used as the material in this test to research the effect of magnesium fertilizer and potassium fertilizer on rice yield and quality, and prove up the rational ratio of magnesium fertilizer and potassium fertilizr er by the randomized block design. [Result] In high, middle and low application potassium fertilizer region, fertilizer application of MgSO4·7H2O:K2O 1: l(magnesium fertilizer 100.5 kg/hrn2, potassium fertilizer 165.0 kg/hm2) or 1:2(magnesium fertilizer 100.5 kg/hm2, potassium fertilizer 276.0 kg/hm2) reasonably increased nitrogen content of rice leaf at critical growth periods; fertilizer application of MgSO4 · 7H2O:K2O 1 : 2(magnesium fertilizer 100.5 kg/hm2, potassium fertilizer 276.0 kg/hm2) kept population leaf area index toward reasonable, against premature senility or remaining green; fertilizer application of MgS04 · 7 H2 O: K2 O 2:1 ( magnesium fertilizer 201. 0 kg/hm , potassium fertilizer 165. 0 kg/hm2) promoted yield by increasing ear number and seed setting rate, and yield reached 9 660 kg/hm2. [ Conclusion] The study has a far — researching significance for keeping soil nutrition balance, then increasing rice yield and modifying rice quality to promote rice industrial sustainable development.%[目的]研究镁钾配施对寒地水稻(Oryza sativa L.)产量的影响,以确定适宜的镁钾配比量.[方法]以空育131为材料,按照随机区组设计,研究镁肥、钾肥对水稻产量的影响,并探明镁肥、钾肥最佳施用比例.[结果]在高中低施钾区,按照七水硫酸镁与氧化钾1∶1(钾肥165.0 kg/hm2,镁肥100.5 kg/hm2)或者1∶2(钾肥276.0 kg/hm2,镁肥100.5 kg/hm2)的重量比配施,能够在水稻关键生育时期合理增加水稻叶片氮含量;按照七水硫酸镁与氧化钾1∶2的重量比配

  17. Quantitative Trait Locus for Photosynthesis and Its Related Physiological Traits in Rice (Oryza sativa L.)%水稻光合作用及相关生理性状的QTL分析

    Institute of Scientific and Technical Information of China (English)

    胡茂龙; 张迎信; 孔令娜; 杨权海; 王春明; 翟虎渠; 万建民

    2007-01-01

    In order to explore the genetic basis for photosynthesis and its related physiological traits, sixty-five chromosome segment substitution lines (CSSLs), derived from a cross between an indica cultivar IR24 and a japonica cultivar Asominori of rice (Oryza sativa L.), were utilized for mapping quantitative trait loci (QTL) for photosynthesis and its related physiological traits. Net photosynthesis (Pn), stomatal conductance (Gs), transpiration rate (Tr), intercellular CO2 concentration (Ci), leaf chlorophyll (CHL), and total leaf nitrogen content (TLN) in flag leaves were measured at heading stage. The CSSLs showed transgressive segregation for many of the traits, and significant correlations were observed for most of the traits. In total, ten QTLs were detected on chromosomes 1, 3, 4, 5, 7, 8, and 10 with a range of percentages of variance explained (PVE) from 9.5% to 46.5%. LOD scores of these QTLs ranged from 2.77 to 8.42. A consistent location was mapped for a QTL controlling stomatal conductance (qGs-8) and leaf chlorophyll concentration (Qchl-8) in the vicinity of R727 on chromosome 8 and for a QTL controlling stomatal conductance (qGs-10) and intercellular CO2 concentration (qCi-10) in the vicinity of C1166 on chromosome 10. No other overlapping loci associated with different traits were detected.These results indicated that the genetic mechanism of photosynthesis was complex in rice.%为了探讨光合作用及相关生理性状的遗传规律,利用由籼稻品种IR24 和粳稻品种Asominori杂交衍生的65个染色体片段置换系(Chromosome Segment Substitution Lines, CSSLs)为材料,研究了水稻光合作用及相关生理性状的QTL.在水稻抽穗后7 d测定叶片光合速率(Pn)、蒸腾速率(Gs)、气孔导度(Tr)、细胞间隙CO2浓度(Ci)、叶绿素含量(CHL)、全氮含量(TLN).共检测到10个QTLs,分布于第1、3、4、5、7、8和10染色体上,LOD值在2.77~8.42之间,贡献率为9.5%~46.5%.其中仅

  18. Cinética de absorção e frações nitrogenadas em arroz expressando o fator de transcrição OsDof261

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    Leandro Martins Ferreira

    Full Text Available Fatores de transcrição Dof podem atuar como ativadores ou repressores transcricionais envolvidos em diversos processos biológicos exclusivos de vegetais, no entanto muitas de suas funções fisiológicas ainda não foram elucidadas. Neste trabalho, plantas de arroz (Oryza sativa L. expressando o fator de transcrição OsDof26 mostraram alterações na cinética de absorção e metabolismo de nitrogênio (N quando submetidas aos tratamentos de 0,2 e 2,0 mM de amônio (NH4+ ou nitrato (NO3- em solução nutritiva. O delineamento experimental foi inteiramente casualizado, com quatro repetições, em esquema fatorial 2 × 2 × 2, duas plantas (plantas de arroz não transformadas e uma linhagem de arroz expressando o OsDof26, a L24, duas fontes de N (NO3- e NH4+ e duas doses (0,2 e 2,0 mM. Aos 17 dias após a germinação (DAG foram aplicados os tratamentos e procedeu-se a coleta da solução nutritiva em intervalos de 30 minutos até as 48 horas, afim de estimar os parâmetros cinéticos de absorção de N (Vmax, Km e Cmín. Aos 19 DAG, obteve-se a massa fresca total, sendo parte desse material armazenado para determinação das frações nitrogenadas e açúcares solúveis. A L24 apresentou menor crescimento da parte aérea e raiz em todos os tratamentos analisados quando comparada com a planta não transformada (WT - wild type. e menores teores de NO3-, NH4+ e N-amino, afetando assim o metabolismo de N nas plantas transformadas.

  19. Caracterização e avaliação de três grupos de arroz-de-sequeiro de diferentes procedências por meio da sensitividade à radiação gama Characterization and evaluation of three groups of rice upland of different origins through gamma-ray sensitivity

    Directory of Open Access Journals (Sweden)

    Luís Roberto Franco Rodrigues

    2002-04-01

    Full Text Available A caracterização e avaliação de variedades de arroz auxiliam na seleção dos parentais e na ampliação da base genética dos programas de melhoramento. Este trabalho teve como objetivo caracterizar e avaliar três grupos de arroz-de-sequeiro (Oryza sativa L. de diferentes procedências por meio da sensitividade à radiação gama. Sementes de 84 variedades procedentes do Japão, Filipinas e Brasil foram submetidas a v��rias dosagens de radiação gama e semeadas em caixas de madeira no delineamento em blocos completos ao acaso com três repetições. O experimento foi instalado em casa de vegetação, em 1991, no Centro de Energia Nuclear na Agricultura (CENA, da Universidade de São Paulo (USP. Mediu-se a sensitividade por meio dos efeitos fisiológicos produzidos na geração M1; determinaram-se as porcentagens de emergência, a sobrevivência e a altura das plântulas. Os resultados mostraram diferenças significativas de sensitividade à radiação gama entre grupos em todos os caracteres avaliados.The characterization and evaluation of varieties of rice aid in the parents selection and in the increase of the genetic base of breeding programs. The present work was carried out to characterize and to evaluate three groups of rice upland (Oryza sativa L. of different origins through gamma-ray sensitivity. Seeds of 84 varieties collected from Japan, Philippines and Brazil, were submitted to various doses of gamma-radiation and sown in wooden boxes. The experiment was conducted in 1991 at greenhouse according to randomized complete block design with three replications. Physiological effects caused by radiation in the M1 generation, such as seed emergency, seedling height and survival rate, were determined and evaluated. The results showed significant differences of sensitivity to the radiation among three groups for all traits evaluated.

  20. Teor de zinco, cádmio e chumbo em plantas de arroz em solos incubados com resíduo siderúrgico Contents of zinc, cadmium and lead in rice plants in soils incubated with slag

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    André F. M. de Andrade

    2010-10-01

    Full Text Available Os efeitos da aplicação de resíduo siderúrgico, proveniente da concentração de Zn em lama de altos fornos siderúrgicos, como fonte de Zn às plantas de arroz e a toxicidade de Cd e Pb no resíduo, foram avaliados em experimento. O material de solo usado proveio do horizonte superficial dos solos Latossolo Vermelho Amarelo (LVA; Neossolo Flúvico (RU e Argissolo Vermelho Amarelo (PVA, coletados no município de Pinheiral, Estado do Rio de Janeiro; utilizou se a variedade de arroz (Oryza sativa L. BRS Curinga. As plantas foram coletadas aos 145 dias após a semeadura; aquelas crescidas no Neossolo Flúvico apresentaram a maior produção de matéria seca e a maior acumulação de zinco, mas a menor de cádmio, enquanto as desenvolvidas no Argissolo Vermelho Amarelo indicaram a menor produção de matéria seca, menor acumulação de zinco, mas maior de chumbo e de cádmio. O extrator DTPA foi alvo de correlações elevadas e significativas com as concentrações de chumbo, cádmio e zinco, nas raízes e na parte aérea e, com a quantidade acumulada nas plantas, mostrando se bom indicador da biodisponibilidade desses três metais. Pelas características apresentadas nos solos estudados e pelas concentrações fitotóxicas do chumbo e do cádmio encontradas nas plantas desenvolvidas no PVA, não é recomendável a utilização desse resíduo como fonte de zinco para a cultura do arroz.The effects of the application of slag, from the concentration of Zn in the mud of steel slag, as a source of Zn for rice plants and the toxicity of Cd and Pb in the residue were studied in a greenhouse during the period from April 2005 to March 2006. The material used came from the surface horizon of a Red Yellow Oxisol (LVA; Fluvic Entisol (RU and Red Yellow ultisol (PVA, collected in the municipality of Pinheiral, in the State of Rio de Janeiro. The variety of rice (Oryza sativa L. BRS Joker was used. Plants were harvested at 145 days after sowing; those

  1. Influencia del pH en la estabilidad de emulsiones elaboradas con proteínas de salvado de arroz

    Directory of Open Access Journals (Sweden)

    Laura Maldonado

    2011-12-01

    Full Text Available Si bien las proteínas de origen animal en muchas instancias pueden tener mejores características funcionales que las proteínas de origen vegetal, el incremento de su costo puede favorecer al uso expansivo de las fitoproteínas como reemplazo. Una de las fuentes de proteínas de origen vegetal es el salvado de arroz, que se obtiene como subproducto en el proceso de pulido del arroz integral (Oryza santiva L para producir el arroz blanco. Se estudió los procesos de cremado, floculación y coalescencia de emulsiones preparadas con proteínas del salvado de arroz a pH 6,0 y 8,0. La obtención de las proteínas del salvado de arroz se realizó en un medio alcalino, partiendo de salvado de arroz desengrasado. El proceso de desestabilización de las emulsiones se analizó a partir de los datos obtenidos por el método de retrodispersión de luz mediante un equipo Turbiscan 2000; en el caso del cremado los datos fueron ajustados a una cinética bifásica con una componente de segundo orden (hiperbólica y otra con un comportamiento sigmoidal. Las emulsiones preparadas a pH 8 presentaron una mayor estabilidad frente al cremado, mientras que los procesos de floculación y coalescencia no fueron influenciados por los distintos valores de pH.

  2. Bebidas saborizadas obtidas de extratos de quirera de arroz, de arroz integral e de soja

    OpenAIRE

    Soares Junior,Manoel Soares; Bassinello, Priscila Zaczuk; Caliari,Márcio; Velasco, Poliana; Reis,Renata Cunha dos; Webber Tavares de CARVALHO

    2010-01-01

    Conduziu-se este trabalho, com o objetivo de desenvolver bebidas elaboradas com extratos de quirera de arroz e de arroz integral e comparar as características químicas e sensoriais destas com bebida elaborada com extrato de soja. Utilizou-se um delineamento inteiramente casualisado, com três tratamentos (bebidas de extrato de quirera de arroz, extrato de arroz integral e extrato soja). As seguintes análises foram realizadas: umidade, cinzas, proteínas, lipídios, carboidratos totais, valor ene...

  3. 水稻黄绿叶突变体ygl13的鉴定及候选基因分析%Characterization and Candidate Gene Analysis of Yellow-Green Leaf Mutantygl13in Rice (Oryza sativa)

    Institute of Scientific and Technical Information of China (English)

    王亚琴; 施军琼; 张婷; 李燕; 张天泉; 张小龙; 桑贤春; 凌英华; 何光华

    2015-01-01

    Objective]The current study was conducted aiming at phenotypic characterization and candidate gene analysis of the yellow-green mutantygl13, so as to add to our knowledge of the formation and regulation of the molecular mechanisms responsible for leaf-color mutations in rice.[Method]A new rice mutant exhibiting stable inheritance was identified as derived from ethyl methane sulfonate (EMS)-treated restorer lineJinhui10 (Oryza sativa), tentatively named asyellow-green leaf 13(ygl13). Morphological characteristics, the photosynthetic pigment contents and the agronomic traits were measured systematically. Transmission electron microscopy was conducted to analyze the ultrastructure of the mesophyll cells and chloroplasts in theygl13 mutant and wide-type plants. Theygl13was crossed with indica sterile line Xinong1A whose plant and leaves were normally green, and the morphological phenotype and segregation ratio of F1 and F2were used for genetic analysis, F2 for gene mapping, and putative genes in the fine mapped region were analyzed, and the candidate genes in the mutant and the wild type were sequenced, respectively.[Result]The ygl13 leaves displayed yellow-green compared with the wild type. And the photosynthetic pigment contents of chlorophyll a, chlorophyll b, and carotenoid decreased significantly at the seedling and the booting stages. The results from transmission electron microscope demonstrated that the structure of the chloroplast inthe mutantygl13developed abnormally with poor thylakoids, less grana stacks and scattered distribution when compared with the wide type. According to the performance of agronomic traits, compared with the wild type Jinhui 10, the grain number per panicle increased by 26.06%, and the pant height and seed setting rate decreased by 12.33% and 18.82%. As for the panicle length, effective panicles per plant, filled grain number per panicle and 1000-grain weight, there was no significant difference between the wild type andygl13

  4. Produção de sementes macho-estéreis em arroz Male-sterile rice seed production

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    Claudio Bragantini

    2001-02-01

    Full Text Available A obtenção comercial de sementes da linhagem macho-estéril é uma das limitações para viabilizar a produção de híbridos de arroz (Oryza sativa L.. Este trabalho buscou estudar três proporções entre a linhagem macho-estéril (linhagem A e a mantenedora (linhagem B. As proporções estudadas foram 8:4, 10:2 e 14:4. As características avaliadas para determinar qual das proporções apresenta maior potencial foram: número e porcentagem de grãos cheios por panículas, e número de grãos de pólen por unidade de área. A proporção 8:4 produziu maior porcentagem de grãos cheios por panícula que as outras duas, mas, proporcionalmente, ocupa maior área física com a linhagem B no campo. Foram observadas diferenças estatísticas na porcentagem de grãos cheios entre as amostras coletadas nas várias fileiras da linhagem A (diferentes distâncias da fonte polinizadora, e observou-se uma influência marcante com relação à direção predominante dos ventos. O número de grãos de pólen foi igual para todas as relações e distâncias da fonte de pólen; por isso, não foi o fator determinante das diferenças observadas em porcentagem de grãos cheios por panícula. Os resultados permitiram concluir que a proporção 10:2 é a de maior potencial para a produção comercial de sementes da linhagem macho-estéril.Commercial male-sterile rice (Oryza sativa L. seed production is one of the limitations to allow large scale hybrid seed production. This work studied three ratios between male-sterile line (A line and maintainer (B line. The A:B ratios used in the study were: 8:4, 10:2 and 14:4. The evaluated traits to determine which ratio is more suitable were: number and percentage of filled grains per panicle and number of pollen grains per unit area. The 8:4 ratio produced statistically significant higher percentage of filled grains per panicle than the other two, but proportionally it requires more field area for the B line. Statistical

  5. Xanthomonas oryzae pv oryzae the Causal Agent of Bacterial Leaf Blight of rice: Isolation, Characterization, and Study of Transposon Mutagenesis

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    Abdjad Asih Nawangsih

    2011-04-01

    Full Text Available Xanthomonas oryzae pv oryzae the Causal Agent of Bacterial Leaf Blight of rice: Isolation, Characterization, and Study of Transposon Mutagenesis. X. oryzae pv. oryzae (Xoo causes bacterial leaf blight (BLB of rice (Oryza sativa L., a major disease that constrains production of the staple crop in many countries of the world. Identification of X. oryzae pv. oryzae (Xoo was conducted based on the disease symptoms, pathogenicity, morphological, physiological, and genetic characteristics of bacterial cultures isolated from the infected plants. Fifty bacterial isolates predicted as Xoo have been successfully isolated. They are aerobic, rod shaped, and Gram negative bacteria. The isolates were evaluated for their hypersensitivity in tobacco and pathogenicity in rice plant. Fifty isolates induced hypersensitive reaction in tobacco and showed pathogenicity symptom in rice in different length. Based on physiological test, hypersensitivity and pathogenicity reactions, three bacterial isolates strongly predicted as Xoo, i.e. STG21, STG42, and STG46, were non indole formation, non pigment fluorescent, hydrolyzed casein, catalase activity positive, but negative oxidase. Partial sequencing of 16S rRNA genes of STG21 and STG42 showed 80% and 82% homology with X. oryzae, respectively, while STG46 showed 84% homology with X. campestris. Mini-Tn5 transposon mutagenesis of STG21 generated one of the mutants (M5 lossed it’s ability to induce hypersensitive reaction in tobacco plant and deficient in pathogenicity on rice. The lesion length of rice leaf caused by the mutant M5 decreased up to 80%.

  6. Eficiência de Metarhizium anisopliae no controle do Percevejo-do-Colmo Tibraca limbativentris (Heteroptera: Pentatomidae em lavoura de arroz irrigado Efficiency of Metarhizium anisopliae on rice stem bug Tibraca limbativentris (Heteroptera: Pentatomidae control in flooded rice field

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    José Francisco da Silva Martins

    2004-12-01

    , pode provavelmente reduzir a taxa de disseminação do fungo nos arrozais e, por conseqüência, ser desfavorável à ocorrência de epizootias.The rice stem bug, Tibraca limbativentris Stal, 1860 (Heteroptera: Pentatomidae, is an important pest of rice (Oryza sativa L. in Brazil, mainly in flooded system of cultivation. The effect of two ways of application (conidia in aqueous suspension and on rice grain of Metarhizium anisopliae strain 172 for the control of the rice stem bug, was evaluated in three experiments conducted in 1991, 1992 and 1994 in commercial irrigated rice. In 1991, the spraying of conidia suspension and manual distribution of rice grain covered with fungal material at dose of 7.2 x 10(13 conidia.ha-1, on soil and among rice stems, where the bugs were located, reduced significantly the insect natural population with control efficiencies of 52.6 and 61.8%, respectively. Studies about establishment and persistence of fungal conidia in soil, using the colony forming unity (CFU counts, indicated that the fungus persisted in the soil between two rice crop seasons, up to 216 days after application, when new rice crops were established. The number of CFU was greater in the plots treated with rice grain covered with fungal material. The linear growth of CFU in the control plots showed that the fungus spread to the untreated areas of the rice field. Significant control efficiency was obtained in 1993 for grain and aqueous fungus treatment with 48.2% and 51.8%, respectively. In 1994, the conidial suspension at dose of 5x10(13 conidia.ha-1 resulted in control efficiency of 39.5%. The level of insect mycosis, however, was low in both 1993 and 1994, reaching a maximum of 20% mycosis in 1993. The low numbers of insect with mycosis compared with the level of mortality, may probably reduce the rate of fungal dissemination in rice fields and, consequently, be detrimental to the occurrence of epizootics.

  7. Breeding and High-Yield Cultivation Technology of Good Quality Cross Combination Waxy Hybrid Rice (Oryza sativa L.ssp.japonic)%优质粳型杂交糯稻新组合选育及高产栽培技术

    Institute of Scientific and Technical Information of China (English)

    王新其; 邱美良; 郭萱昊; 殷丽青; 李茂柏; 卢有林; 沈革志

    2012-01-01

    为了快速培育高产、优质、抗性强的杂交粳型糯稻新种质,选用综合农艺性状优良的粳型寒丰糯(HFwx),将其与同型的寒丰不育系(HFA)进行育性转换,获得了粳型糯质新不育系寒丰糯(HFwxA),并与自主选育的粳型糯质恢复系配组育成了杂交粳型糯稻新组合(HFwxA/N2R).小区和示范试验结果表明,选育获得的杂交糯稻新组合具有高产、优质、抗性强等特点,具有生产应用前景.杂交糯稻新组合的生育特征特性和高产栽培技术的试验总结,对杂交糯稻的推广应用和产业化发展都具有十分重要的参考意义.%In order to quick breed a new high yield,high quality and strong resistance hybrid glutinous rice germplasm (Oryza sativa L. Ssp. Japonic) ,japonica rice (HFwxB) with good comprehensive agronomic was obtained and translated into HFwxA by using it's the same type of CMS (HFA), a new hybrid glutinous rice germplasm was gotten and named Nuoza 2 (HFwxA/N2R). The small field test and demonstration trials indicated that the new combination of Oryza sativa L. Ssp. Japonic was high-yield, good quality and strong resistance, which could be applied and extended. The high-yield cultivation techniques and breeding characters of the hybrid new combination are very useful for its application and industrialization development.

  8. 水稻受精前后胚囊内钙调素分布的变化:免疫金电镜观察%Changes of Calmodulin Distribution in the Embryo Sac of Oryza sativa Before and After Fertilization: an Immunogold Electron Microscope Study

    Institute of Scientific and Technical Information of China (English)

    杨军; 赵洁; 梁世平; 杨弘远

    2002-01-01

    Changes of calmodulin (CaM) distribution in the embryo sac of rice (Oryza sativa subsp. japonica) at various stages before and after fertilization have been investigated by using immunogold electron microscopy. Before pollination, both cytoplasm and vacuoles of the egg cell, synergids and central cell were labeled by gold particles. A small amount of gold particles were localized in the nucleus, endoplasmic reticulum, mitochondria and dictyosomes. From pollination to fertilization, CaM amount increased in these cells, especially rich in the starch of amyloplasts. Increase of gold particles in the central cell began about 2 h earlier than that in the egg cell. There was no distinct difference of CaM amount between the degenerated and the persistent synergids. It is interesting to observe an obvious change of CaM distribution form during pollination and fertilization from scattered single particles to clustered particles, and back again to single particles after the fertilization finished. CaM was also localized extracellularly in the embryo sac wall as well as in the wall and intercellular space of nucellus cells. The extracellular CaM also changes in its amount and form after pollination. These results suggest that CaM, either intra- or extra-cellular, may play important roles in fertilization and zygote formation.%用胶体金免疫电镜技术观察了水稻(Oryza sativa subsp. japonica)受精前后胚囊内钙调素的分布变化.授粉后,卵细胞、助细胞和中央细胞内的钙调素较授粉前均有所增加.中央细胞内钙调素的增加要比卵细胞中约早2 h,退化助细胞与宿存助细胞之间的钙调素含量无明显差异.授粉到受精期间,钙调素的主要分布形式由分散的单颗粒转变为聚集颗粒,受精完成后再变为分散的单颗粒形式.胚囊壁及珠心细胞的细胞壁和胞间隙中也观察到钙调素的分布和数量变化.初步讨论了胞内和胞外钙调素在水稻受精与合子形成中的作用.

  9. EFFECT OF GROWTH PROMOTOR AND BIOPROTECTOR ON THE DEVELOPMENT OF IRRIGATED RICE AND BROWN SPOT INCIDENCE USO DE PROMOTOR DE CRESCIMENTO E DE BIOPROTETOR NA CULTURA DO ARROZ IRRIGADO E SEU EFEITO SOBRE A INCIDÊNCIA DA MANCHA-DE-GRÃOS

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    Rodrigo Fascin Berni

    2007-09-01

    Full Text Available

    Two experiments were carried out to evaluate the effect of two commercial products, one containing plant-growth promoting rhizobacteria (PGPR and micorrhizae, and the other containing micronutrients and aminoacids, on the development of irrigated rice. One kilogram of the biological product Biosol (trade mark was added to the seeds at sowing time (1kg / ha and the biofertilizer Greensol (trade mark was sprayed by airplane (200 ml / ha in association with fungicides, when 5% of panicles had been emitted. The treatments used were T1: Control; T2: Greensol; T3: Biosol + Greensol and T4: Biosol. Five parameters were evaluated: number of shoots per meter, dry weight 90 days after sowing, grain yield, empty grains percentage and incidence of brown spot disease (Helminthosporium oryzae Breda de Haan. Number of shoots per meter was uniform in all treatments. Grouped analysis indicated superiority of all treatments with Biosol over the control for the parameters of dry weight of plants and roots. Treatments T3 and T4 presented superior yields. In these treatments empty grain percentage was lower than the control. Brown spot severity index indicated that all treatments were better than control and T3 and T4 treatments had the lowest disease index.

    KEY-WORDS: Helminthosporium oryzae; Oryza sativa; disease control; rice.

    Foram conduzidos dois experimentos com o objetivo de avaliar os efeitos de dois produtos comerciais sobre o desenvolvimento da cultura do arroz irrigado e sobre a incidência da mancha-de-grãos causada por Helminthosporium oryzae. Um dos produtos consistia de rizobactérias promotoras de crescimento de plantas (RPCPs e micorrizas (Biosol e o outro era constituído por micronutrientes e amino

  10. 水稻幼苗镉吸收动力学特性的遗传多样性分析%Genetic diversity of cadmium absorption kinetic characteristics in rice (Oryza sativa) seedlings

    Institute of Scientific and Technical Information of China (English)

    王龙; 高子平; 李文华; 徐莜; 张长波; 杨庆文; 汤继华; 刘仲齐

    2016-01-01

    在人工气候室水培条件下,对19份水稻核心种质和5份水稻品种的幼苗耐镉特性和镉离子(Cd2+)吸收动力学特性进行了研究,试验结果表明,水稻幼苗的根系生物量和镉含量都存在广泛的遗传差异。在0~4.45μmol·L-1的外界环境中,不同基因型水稻幼苗根系的Cd2+吸收动力学特征都符合米氏方程,但特征值Fmax和Km在基因型间有明显差异。Fmax最小为37.8 nmol·g-1(DW)·h-1,最大为87.5 nmol·g-1(DW)·h-1。当根系Fmax值高于55.5 nmol·g-1(DW)·h-1时,地上部的Cd2+积累动力学特征也符合米氏方程;但当根系Fmax值小于50.8 nmol·g-1(DW)·h-1时,地上部的Cd2+积累动力学特征却符合线性方程,此时截距a与Km值有密切关系,Km值为0.5~1.3μmol·L-1时a为正,Km值为2.9~3.9μmol·L-1时a为负。在4.45μmol·L-1的Cd胁迫环境下,根系和地上部的Cd积累量与米氏方程的Fmax和线性方程的斜率b表现出显著的线性相关。Cd转运效率既与环境中的Cd2+浓度有关,也与地上部的Cd积累特性有关。地上部Cd积累特性符合线性方程的水稻品种,其转运效率随着环境中Cd2+浓度的增加而持续升高,而地上部Cd积累特性符合米氏方程的水稻品种,其转运效率往往随着环境中Cd2+浓度的升高而降低。这些结果说明水稻根系和地上部对Cd2+的吸收存在不同的阻控机制, Cd2+吸收特性和转运效率在基因型间有丰富的遗传多样性。根系Fmax小且地上部线性方程斜率b也小的基因型多为根系Cd积累量低和Cd转运率低的低积累种质资源。%24 rice (Oryza sativa ssp. indica) cultivars including 19 core germplasms and 5 modern cultivars were used to study the characteristics of tolerance and absorption kinetics of rice seedlings to cadmium under hydroponic conditions in phytotron. The results showed that there were extensive genetic differences in root biomass and cadmium content of rice seedlings. The Cd2+absorption

  11. El arroz : Alimento de millones

    OpenAIRE

    Ponzio, Nora Raquel; Salsamendi, Maité; Pinciroli,María; Ponzio, Nora R.

    2015-01-01

    El arroz conforma, junto al maíz y al trigo, la trilogía de cereales más cultivados del mundo. Desde el punto de vista histórico, cultural y alimenticio tiene tanta importancia para Asia como el maíz para América y el trigo para Europa, es decir acompañó a los pueblos de esas regiones en su evolución. Para vastos pueblos del mundo representa más del 50% del total de calorías diarias ingeridas y en esas regiones llega a un consumo de hasta 237 kg por habitante por año. Si bien su origen geográ...

  12. Evaluación de la calidad tecnológica, nutricional y sensorial de productos de panadería por sustitución de harina de trigo por harina integral de arroz

    Directory of Open Access Journals (Sweden)

    Myriam de las Mercedes Salas Mellado

    Full Text Available Resumen El objetivo del presente trabajo fue determinar las características tecnológicas, nutricionales y sensoriales del pan elaborado por sustitución de 25 y 50% de la harina de trigo convencional por harina integral de arroz (Oryza sativa, L. Los productos desarrollados se evaluaron en términos de volumen específico del pan, aspecto de la rebanada central, dureza de la miga, contenido de humedad, fibra dietética, fitatos, minerales, cinética de retrogradación de la amilopectina por calorímetro diferencial de barrido y evaluación sensorial mediante escala hedónica de nueve puntos. En general, la incorporación de la harina integral de arroz a la formulación mostró diferencias significativas en cuanto a la cinética de retrogradación de la amilopectina en comparación con las muestras control (entalpía de retrogradación varió desde 2,4 a 1,8-2,1 J/g. También repercutió en una disminución del volumen de la pieza panaria (desde 4,48 a 2,26-2,86 cm3/g que estuvo directamente relacionado con un aumento de la dureza de la miga (desde 0,77 a 1,90-3,85 N. No obstante, se observó una alta aceptación global por parte del consumidor (7,2-7,3. En cuanto a los minerales, el Ca y el Zn podrían estar biodisponibles en la formulación del 25% y en las muestras controles. En los productos con harina integral de arroz se observó un aumento significativo del nivel de trifosfatos de mio-inositol (desde valores despreciables a 0,38-0,44 μmoles/g, el cual se considera que ejerce actividad biológica positiva en el organismo. Es importante considerar que la biodisponibilidad de minerales en los productos integrales está relacionada con la formulación y el proceso de elaboración del pan, principalmente por la presencia de fitatos. Éstos están presentes en alta proporción en la formulación con 50% de harina integral de arroz, por lo que se estima una baja biodisponibilidad de minerales debido a que las relaciones molares fitato

  13. Índice de intensidade de infecção adaptado ao estudo de manchas de sementes de arroz Index of infection intensity adapted for the study of spotted rice seeds

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    Jaciro Soave

    1988-01-01

    Full Text Available A avaliação de manchas em amostras de sementes de arroz (Oryza sativa L. tem sido feita mediante o cálculo de porcentagem de sementes manchadas, o que não dá informação quantitativa sobre sua incidência. Com o objetivo de obter dados quantitativos de manchas de sementes de arroz, procurou-se adaptar o índice de intensidade de infecção proposto por Amaral e exemplificado por Silva, comparando-se os dois métodos. Foram utilizadas 128 amostras de 5g de sementes provenientes de ensaios conduzidos nos municípios paulistas de Jaboticabal e Pindorama, no ano agrícola de 1982/83, e compostos de 16 cultivares de arroz-de-sequeiro, com quatro repetições. Para calcular o índice de intensidade de infecção, cada amostra foi separada visualmente em quatro categorias: n0 = sem manchas; n1 = poucas manchas (até 5%; n2 = muitas manchas (6-25%, e n3 = extremamente manchadas (acima de 25% da superfície com manchas. A mesma amostra foi separada em sementes com e sem manchas, independente da quantidade de manchas que cada semente apresentasse, calculando-se a porcentagem das manchadas. A comparação da análise da variância e da correlação entre ambas as avaliações revelou que o índice de intensidade de infecção, denominado pelos autores de índice de intensidade de manchas, proporcionou maior discriminação entre os tratamentos que a porcentagem de sementes manchadas, sugerindo-o para a avaliação quantitativa de manchas de sementes de arroz.The evaluation of spots in rice seeds has been performed through the calculation of the percentage of spotted seeds. However this measurement is not quantitative. The objective of this experiment was to compare the percentage of spotted seeds with an index of infection intensity, which gives a more precise quantitative information about the extension of the seed surface area infected. For this comparison, 5g-rice-seed samples from two field trials, carried out in Jaboticabal and Pindorama, in the

  14. Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99A

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    Szurek Boris

    2008-05-01

    Full Text Available Abstract Background Xanthomonas oryzae pv. oryzae causes bacterial blight of rice (Oryza sativa L., a major disease that constrains production of this staple crop in many parts of the world. We report here on the complete genome sequence of strain PXO99A and its comparison to two previously sequenced strains, KACC10331 and MAFF311018, which are highly similar to one another. Results The PXO99A genome is a single circular chromosome of 5,240,075 bp, considerably longer than the genomes of the other strains (4,941,439 bp and 4,940,217 bp, respectively, and it contains 5083 protein-coding genes, including 87 not found in KACC10331 or MAFF311018. PXO99A contains a greater number of virulence-associated transcription activator-like effector genes and has at least ten major chromosomal rearrangements relative to KACC10331 and MAFF311018. PXO99A contains numerous copies of diverse insertion sequence elements, members of which are associated with 7 out of 10 of the major rearrangements. A rapidly-evolving CRISPR (clustered regularly interspersed short palindromic repeats region contains evidence of dozens of phage infections unique to the PXO99A lineage. PXO99A also contains a unique, near-perfect tandem repeat of 212 kilobases close to the replication terminus. Conclusion Our results provide striking evidence of genome plasticity and rapid evolution within Xanthomonas oryzae pv. oryzae. The comparisons point to sources of genomic variation and candidates for strain-specific adaptations of this pathogen that help to explain the extraordinary diversity of Xanthomonas oryzae pv. oryzae genotypes and races that have been isolated from around the world.

  15. A High Efficient Approach Used for BAC-contig Extension of Oryza sativa with PCR Screening the BAC Clone Pools%一种使用混合PCR筛选技术高效延伸水稻BAC-重叠群的方法

    Institute of Scientific and Technical Information of China (English)

    胡昊; 李滔; 穆洁; 韩斌; 洪国藩

    2002-01-01

    使用"克隆连克隆(clone by clone)" 战略进行水稻基因组测序需要依赖于构建好的基因组物理图. 工作着眼于水稻籼稻广陆矮4号(Oryza sativa indica GuangLuAi4)第四号染色体长臂上56.1~68 cM的区域, 采用PCR方法筛选BAC全库来延伸重叠群, 构建物理图. 通过参照特异遗传探针定位的BAC克隆(seed BAC)末端序列设计了14对引物, 按特定规则分成3组, 分别以代表水稻BAC 库( 共22 368个BAC )的233个BAC pool为模板进行PCR反应, 一共获得了65个阳性BAC克隆, 通过末端测序、酶切杂交等方法确定了其中29个BAC克隆作为有效延伸的克隆, 延伸了8个重叠群. 通过酶切杂交、末端测序等方法还获知阳性BAC的延伸方向、延伸长度以及与seed BAC之间的重叠长度. 8个重叠群总的延伸长度达到510 kb. 与实验室原用于作物理图的其他方法如指纹图、点杂交等相比, 该方法有高效率、高灵敏度、专一性好、可重复使用等优点. 创新之处在于通过引物的合理分组和PCR实验条件的改进降低了假阳性和假阴性率.%To extend 8 BAC contigs, which were previously located in the 56.1—68 Cm region of the chromosome 4 of the Oryza sativa indica GuangLuAi4, 14 pairs of primers were designed according to the terminal sequences of the existing seed BACs and were deliberately divided into 3 groups. With the 3 groups of primer mixtures, 233 pools of BAC DNA that represent 22 368 BAC clones from O.sativa indica GuangLuAi4 genomic library were screened. 65 positive clones corresponding to the 8 contigs were isolated and 29 clones of them were confirmed to be extended to the seed BACs by end sequencing and fingerprinting. The protocol greatly enhanced the efficiency of the contig extension and was also superior for its specificity, sensitivity and reusability to the colony in situ hybridization which is a conventional method employed in contig extension and physical map construction.

  16. Transcriptome Analysis of Salt Stress Responsiveness in the Seedlings of Dongxiang Wild Rice (Oryza rufipogon Griff.)

    OpenAIRE

    Yi Zhou; Ping Yang; Fenglei Cui; Fantao Zhang; Xiangdong Luo; Jiankun Xie

    2016-01-01

    Dongxiang wild rice (Oryza rufipogon Griff.) is the progenitor of cultivated rice (Oryza sativa L.), and is well known for its superior level of tolerance against cold, drought and diseases. To date, however, little is known about the salt-tolerant character of Dongxiang wild rice. To elucidate the molecular genetic mechanisms of salt-stress tolerance in Dongxiang wild rice, the Illumina HiSeq 2000 platform was used to analyze the transcriptome profiles of the leaves and roots at the seedling...

  17. Termometria infravermelha na fenotipagem para resistência à seca de linhagens inter e intraespecíficas de arroz Infrared thermometry for drought phenotyping of inter and intra specific upland rice lines

    Directory of Open Access Journals (Sweden)

    Cleber M. Guimarães

    2010-02-01

    Full Text Available Propôs-se avaliar, no presente estudo, a técnica da termometria ao infravermelho na caracterização de linhagens interespecíficas (Oryza glaberrima x Oryza sativa cv Caiapó e intraespecíficas de arroz para tolerância a seca. O experimento, conduzido em Porangatu, GO, foi submetido a condições adequadas de umidade no solo até 30 dias após a emergência, quando então foi implantado um tratamento com deficiência hídrica moderada (aproximadamente 50% da irrigação aplicada em uma parcela testemunha, com condições adequadas de umidade no solo. Verificou-se que as linhagens mais produtivas em condições de deficiência hídrica apresentaram plantas mais altas, com panículas mais densas e com grãos mais bem formados, com menor esterilidade de espiguetas. Observou-se, também, que a temperatura das folhas se correlacionou positivamente com a esterilidade de espiguetas e negativamente com a massa de 100 grãos, altura das plantas, fertilidade de perfilhos e produtividade. Exceto a fertilidade de perfilhos, os demais componentes se correlacionaram com a produtividade de grãos, sendo que com a esterilidade de espiguetas a correlação foi negativa. Concluiu-se que a O. glaberrima confere, às suas progênies, maior rusticidade à deficiência hídrica e que a termometria ao infravermelho é uma técnica auxiliar importante na fenotipagem para tolerância a seca.The purpose of the present study was to evaluate the use of infrared thermometry in the characterization of inter specific (Oryza glaberrima x Oryza sativa cv Caiapó and intra specific upland rice lines for drought tolerance. The experiment, carried out at Porangatu in the State of Goiás, was submitted to adequate soil moisture for up to 30 days following emergence when a moderate water stress treatment was imposed (about 50% of the applied irrigation in a control plot in which adequate conditions of soil moisture were maintained. It has been observed that lines with higher

  18. Isolamento, armazenamento e determinação da colonização por fungos “dark septate” a partir de plantas de arroz. = Isolation, storage and determination of fungal colonization “dark septate” from rice plants.

    Directory of Open Access Journals (Sweden)

    Karen Gonçalves Ribeiro

    2011-08-01

    Full Text Available Endophyte fungi known as DSEF can be plant-growth-promoting. Aiming to improve a methodology for the isolation, storage and determine the rice roots colonization by “dark septate”, a study was developed based on the achievement of these microorganisms in Oryza glumaepatula plants collected in Amazon region. The plant roots of twelve O. glumaepatula samples were sectioned, disinfected, and placed in plates with agar-malte medium added of chloramphenicol, sulphametazole and trimetropin. The isolates were evaluated in relation of dark septate characteristics and stored in distilled water, and in distilled water added of glycerol. Five isolates considered dark septate were re-inoculated in O. glumaepatula and O. sativa, and also analyzed through amplification and sequencing of ITS1-5.8S-ITS2 region. The agar-malte medium was efficient to isolate dark septate, and more than 50 isolates were obtained. The distilled water and also distilled water added of glycerol were efficient to maintain the fungus culture at least 12 months. The five isolates re-inoculated were able to colonize both O. glumaepatula and O. sativa, without pathogenic symptoms observed. The molecular approach reveled that these fungus are not similar to each other and also to others dark septate already described. These results show that the proposed methodology was efficient to obtain distinct fungus species and O. glumaepatula is a host to high diversity of this fungus group.=Os fungos endofíticos conhecidos como DSEF ou “dark septate” podem ser promotores de crescimento vegetal. Com o objetivo de aperfeiçoar uma metodologia para o isolamento, armazenamento e determinação da colonização de raízes de arroz por fungos “dark septate” desenvolveu-se um estudo a partir da obtenção destes microrganismos em plantas de Oryza glumaepatula coletadas em ambientes amazônicos. As raízes das plantas de doze amostras de O. glumaepatula foram seccionadas, desinfestadas e

  19. 水稻显性窄叶突变体Dnal1的鉴定与基因定位%Identification and Gene Mapping of a Dominant Narrow Leaf MutantDnal1 in Rice (Oryza sativa)

    Institute of Scientific and Technical Information of China (English)

    桑贤春; 林婷婷; 何沛龙; 王晓雯; 廖红香; 张孝波; 马玲; 何光华

    2014-01-01

    极显著下降,导致Dnal1的千粒重仅为野生型的73.18%,极显著下降。低密度种植条件下,Dnal1的理论产量显著低于野生型;高密度种植条件下,Dnal1的理论产量则显著高于野生型,较高的结实率和单株有效穗是Dnal1产量提高的主要原因。西农1A/Dnal1与Dnal1/中花11杂交组合的F1群体,剑叶的叶片宽度分别为0.99 cm和0.94 cm,与Dnal1的0.96 cm相比,无显著差异;F2群体中出现窄叶植株和宽叶植株两种类型,窄叶和宽叶单株出现的频率呈双峰分布,且窄叶和宽叶的分离比符合3﹕1,表明Dnal1的窄叶性状受1个显性主效基因调控。利用分子标记最终将DNAL1定位在第2染色体上,位于SSR标记RM13646和RM1307之间,物理距离为391 kb。【结论】Dnal1是一个EMS诱变获得的显性窄叶水稻突变体,基因定位在第2染色体391 kb的物理范围内,在高密度种植条件下具有增产潜力。%Objective Leaf blade is the main location of photosynthesis in high plants. A moderate narrowing could enhance crop quality and yield by fascinating the utilization of solar energy and has been paid wide attentions in crop breeding. A novel dominant narrower leaf mutant has been identified and the results provided a foundation in the research of leaf morphological formation and plant type breeding inOryza sativa.[Method]A narrow leaf mutant (Dnal1) was discovered from the progeny of indica restorer line Jinhui10 with seeds treated by ethyl methanesulfonate and the trait of narrow leaf has inherited steadily after seven generations’ self-fertility. The flag, second and third leaf blades were utilized for detecting leaf widths and rolled indexes at the blooming stage, meanwhile, the middle position of flag leaf was used for paraffin section. At the filling stage, the characteristics of chloroplast pigment, photosynthetic rate (Pn), stomatal conductance (Gs) and transpiration rate (Tr) were measured. TheDnal1 was crossed withindica line

  20. Transposable element distribution, abundance and role in genome size variation in the genus Oryza

    Directory of Open Access Journals (Sweden)

    Collura Kristi

    2007-08-01

    Full Text Available Abstract Background The genus Oryza is composed of 10 distinct genome types, 6 diploid and 4 polyploid, and includes the world's most important food crop – rice (Oryza sativa [AA]. Genome size variation in the Oryza is more than 3-fold and ranges from 357 Mbp in Oryza glaberrima [AA] to 1283 Mbp in the polyploid Oryza ridleyi [HHJJ]. Because repetitive elements are known to play a significant role in genome size variation, we constructed random sheared small insert genomic libraries from 12 representative Oryza species and conducted a comprehensive study of the repetitive element composition, distribution and phylogeny in this genus. Particular attention was paid to the role played by the most important classes of transposable elements (Long Terminal Repeats Retrotransposons, Long interspersed Nuclear Elements, helitrons, DNA transposable elements in shaping these genomes and in their contributing to genome size variation. Results We identified the elements primarily responsible for the most strikingly genome size variation in Oryza. We demonstrated how Long Terminal Repeat retrotransposons belonging to the same families have proliferated to very different extents in various species. We also showed that the pool of Long Terminal Repeat Retrotransposons is substantially conserved and ubiquitous throughout the Oryza and so its origin is ancient and its existence predates the speciation events that originated the genus. Finally we described the peculiar behavior of repeats in the species Oryza coarctata [HHKK] whose placement in the Oryza genus is controversial. Conclusion Long Terminal Repeat retrotransposons are the major component of the Oryza genomes analyzed and, along with polyploidization, are the most important contributors to the genome size variation across the Oryza genus. Two families of Ty3-gypsy elements (RIRE2 and Atlantys account for a significant portion of the genome size variations present in the Oryza genus.

  1. 水稻Pib基因及其连锁RFLP标记在栽培稻、药用野生稻和玉米中的比较物理定位%Comparative Physical Localization of Rice Pib Gene and Its Linked RFLP Markers in Oryza sativa, O. officinalis and Zea mays

    Institute of Scientific and Technical Information of China (English)

    李霞; 宁顺斌; 金危危; 宋运淳

    2002-01-01

    比较遗传学研究表明,禾本科不同基因组之间存在着广泛的同线性和共线性.对水稻(Oryza sativa L.)这一模式植物与其他禾本科植物的原位杂交定位可以揭示禾本科植物基因组的共同特点和进化规律,为建立禾本科遗传大体系积累资料.实验以图位克隆法分离的水稻Pib 基因(10.3 kb)和与之连锁的RFLP标记为探针, 研究了Pib及与其连锁的RFLP标记在供试种中的同源性和物理位置. Southern杂交结果表明,Pib在玉米(Zea mays L.)基因组中有同源序列.进一步利用单色和双色荧光原位杂交技术确定了Pib在栽培稻(O.sativa ssp. indica cv. Guangluai 4)、玉米和药用野生稻(O. officinalis Wall ex Watt)染色体上的物理位置.定位结果表明,Pib基因和与之连锁的RFLP标记在这3个供试种基因组中具有同线性.%Comparative genetic studies have shown that there are widespread synteny and colinearity of the genes among different species within grass family. Rice (Oryza sativa L.) is a model plant, and analysis of its genome allows us to reveal the common features and the evolutionary rules of the gramineous genomes and accumulate the data for establishment of a common genetic system in the Poaceae. In this study, a rice gene Pib (10.3 kb), a map-based cloned gene, and RFLP markers linked with it are used as the tested probes to investigate their homology and physical location among the tested species. Southern blotting analysis showed that there were sequences homologous to Pib in maize genome. Further, Pib was localized onto the chromosomes of O. Sativa ssp. indica cv. Guangluai 4, O. Officinalis Wall ex Watt and the inbred line of Zea mays cv. Huangzao 4. The results of fluorescence in situ hybridization (FISH) and double-color FISH indicated that a synteny of Pib and RFLP markers linked with Pib existed among the genomes of the three tested species.

  2. Pyramiding the Blast Resistant Gene Pi9 and the Brown Planthopper Gene Bph18(t) to Develop Restorer Lines in Rice (Oryza sativa L.)%聚合抗稻瘟病基因Pi9和抗褐飞虱基因Bp h18(t)选育水稻恢复系

    Institute of Scientific and Technical Information of China (English)

    马文清; 裴庆利; 梁云涛; 刘丕庆; 赵开军; 王春连; 林纬; 杨培忠; 于洁

    2014-01-01

    水稻(Oryza sativa L.)作为粮食作物,在全世界粮食生产中具有极其重要的地位。稻瘟病、褐飞虱等病虫害的发生严重危害着水稻的安全生产,培育并利用水稻抗性品种能经济有效地预防水稻病虫害的发生,因此,培育抗性品种在水稻安全生产中尤为重要。本研究以具有抗稻瘟病基因Pi9的抗病品系75-1-127为抗病亲本,以携带有抗褐飞虱基因Bph18(t)的水稻材料C4064为抗虫亲本,以性状优良的恢复系测679作为轮回亲本,进行杂交、回交和自交,并辅以田间多代选择。在分离群体中,使用与Pi9紧密连锁的SCAR标记pB8跟踪目标基因Pi9,利用与Bph18(t)紧密连锁的标记KC16跟踪目标基因Bph18(t)。通过分子标记辅助选择、农艺性状评价和抗病抗虫鉴定,选育出聚合了Pi9和Bph18(t)基因、对稻瘟病和褐飞虱的抗性水平接近抗病亲本或抗虫亲本的恢复系。%Rice (Oryza sativa L.), a cereal crop, plays an ultimately important role in the global food production. The occurrence of the rice disease and pest such as the rice blast (RB) and the brown planthopper (BPH) can seve-rely damage the safe production of rice, and the development and application of the resistant varieties can prevent the occurrence of the rice disease and pest economically and effectively, so the development of the resistant variety is crucial in the safe production of rice. In this study, we used the disease resistant line 75-1-127 carrying rice blast resistant gene Pi9 as the disease-resistant parent, the BPH-resistant line C4064 harboring brown planthopper resistant gene Bph18(t) as the BPH-resistant parent, and the elite restoring line Ce679 as recurrent parents, to hy-bridize, backcross, selfcross and field select for multiple generations. The Pi9-linked SCAR marker pB8 was used to select Pi9, and the Bph18(t)-linked marker KC16 was used to select Bph18(t) in the segregating populations. By

  3. Development of blast resistant somaclones of the upland rice cultivar araguaia Desenvolvimento de somaclones da cultivar araguaia resistentes à brusone em arroz de sequeiro

    Directory of Open Access Journals (Sweden)

    LEILA GARCÊS DE ARAÚJO

    2000-02-01

    Full Text Available The degree of blast resistance of upland rice (Oryza sativa L. cultivar Araguaia has decreased over time causing significant yield losses. The major objective of this study was to obtain blast (Pyricularia grisea resistant somaclones, adapting greenhouse and field selection procedures. Rice blast resistance and agronomic traits were assessed in R2 to R6 generations derived from regenerant plants (R1 from immature panicles of Araguaia. The evaluation and selection procedures include testing of early segregating populations and fixed lines in the advanced generations, under natural field conditions, and artificial inoculations in the greenhouse, with prevalent races IB-1 and IB-9 of P. grisea. Somaclones with both vertical resistance and slow blasting resistance were obtained. Twenty of 31 somaclones developed with a high degree of vertical resistance and fan shaped plant type maintained resistance in field and blast nursery tests in the R6 generation. Greenhouse selection with two specific physiologic races yielded 44 somaclones with slow blasting resistance, similar plant type and yield potential as that of Araguaia.O grau de resistência à brusone da cultivar de arroz (Oryza sativa Araguaia tem decrescido ao longo dos anos, resultando em prejuízos significativos na produtividade. O objetivo principal deste estudo foi obter somaclones resistentes à brusone (Pyricularia grisea, adaptando os métodos de seleção em casa de vegetação e de campo. Foram avaliadas plantas regeneradas (R1 de panículas imaturas da cultivar Araguaia nas gerações R2 a R6 para resistência à brusone e características agronômicas. O método de avaliação e seleção de plantas envolveu avaliações de populações segregantes e linhagens fixadas, em condições naturais de infecção no campo, e infecções artificiais em casa de vegetação com duas raças prevalecentes de P. grisea IB-1 e IB-9. Foram obtidos somaclones com resistência vertical e progresso

  4. Germinação e formação de mudas de arroz irrigado sob estresse salino Germination and formation of rice seedlings under saline stress

    Directory of Open Access Journals (Sweden)

    Luis N. Rodrigues

    2002-12-01

    Full Text Available Um experimento foi instalado em condições de casa-de-vegetação com o objetivo de se estudar os efeitos da salinidade da água de irrigação sobre a germinação e formação de mudas da cultivar de arroz 'Formoso' (Oryza sativa L., lançada recentemente pela EMBRAPA para áreas irrigadas. Para os estudos de germinação adotou-se o delineamento inteiramente casualizado, com 5 níveis de salinidade da água de irrigação (N1 = 0,5, N2 = 2,5, N3 = 4,5, N4 = 6,5 e N5 = 8,5 dS m-1 e 5 repetições. Para o vigor de plântulas foi adotado um delineamento inteiramente casualizado, em esquema fatorial (5 x 2 envolvendo 5 níveis de salinidade e 2 épocas de avaliação, com 5 repetições; os níveis de salinidade foram os mesmos e o vigor foi avaliado em duas épocas, aos 8 (E1 e aos 13 (E2 dias após semeadura (DAS, através de fitomassa seca das raízes, peso das matérias verde e seca da parte aérea, relação raiz/parte aérea, altura de plântula, comprimento radicular e número de folhas. A maior parte das sementes germinou aos 4 DAS. A cultivar 'Formoso' é tolerante à salinidade na fase de germinação, atingindo percentual superior a 87%, em todos os tratamentos. O efeito da salinidade foi intensificado na fase de plântula, reduzindo o seu desenvolvimento inicial.A study was carried out under greenhouse conditions with the objective of verifying the effects of salinity of irrigation water on the germination and seedling vigor of irrigated rice (Oryza sativa L. cultivar 'Formoso'. Germination and vigor were evaluated adopting a completely randomized experimental design with 5 levels of water salinity - (ECw: 0.5, 2.5, 4.5, 6.5 and 8.5 dS m-1 - and 5 replications. Most of the seeds germinated 4 days after sowing (DAS. The 'Formoso' cultivar was found to be tolerant to the tested salinity levels in the germination stage, reaching a germination level of above 87% (14 DAS in all the treatments. For the seedling vigor, a completely

  5. Influência do magnésio na resistência do arroz à mancha parda

    Directory of Open Access Journals (Sweden)

    Wiler Ribas Moreira

    2013-06-01

    Full Text Available A mancha parda, causada pelo fungo Bipolaris oryzae, é uma das principais doenças da cultura do arroz. Sabe-se que o magnésio (Mg tem o potencial de reduzir a intensidade de algumas doenças em culturas de importância econômica e, portanto, o objetivo desse trabalho foi verificar o efeito de diferentes doses desse macronutriente na resistência do arroz à mancha parda. Para isto, plantas de arroz (cv. Metica-1 foram cultivadas em solução nutritiva contendo 0,25; 0,5; 1; 2 e 4 mmol.L-1 de Mg. Foram avaliados o período de incubação (PI, o número de lesões (NL por cm² de folha, a severidade da mancha parda e a concentração foliar de Mg. Os dados de severidade foram usados para calcular a área abaixo da curva do progresso da mancha parda (AACPMP. Outro experimento com as doses de 0,25; 2,5 e 4 mmol.L-1 de Mg foi conduzido para determinar a concentração de aldeído malônico (MDA e a atividade da quitinase (QUI, β-1,3-glucanase (GLU, peroxidase (POX, polifenoloxidase (PFO e fenilalanina amônia-liase (FAL em resposta à infecção por B. oryzae. Houve efeito linear positivo e linear negativo das doses crescentes de Mg, respectivamente, na concentração foliar de Mg e na AACPMP. Houve efeito quadrático das doses crescentes de Mg no PI e no NL por cm² de área foliar. Alta concentração de MDA e maior atividade da PFO ocorreram com a dose de 4 mmol.L-1 de Mg. As atividades da QUI e da GLU não foram afetadas pelas doses de Mg. A maior atividade da POX ocorreu para as plantas supridas com as doses de 2,5 e 4 mmol.L-1 de Mg. A FAL apresentou aumento significativo em atividade às 48 e 72 horas após inoculação com a dose de 4 mmol.L-1 Mg. Os resultados desse estudo demonstram que a alta concentração foliar de Mg aumentou a resistência do arroz à infecção por B. oryzae principalmente por meio do aumento das atividades das enzimas de defesa.

  6. Breeding of New Hybrid Glutinous Rice Combination ( Oryza sativa L.ssp.Japonic) and Its Characteristics%水稻粳糯杂交新组合的选育及其特征特性

    Institute of Scientific and Technical Information of China (English)

    王新其; 林金元; 殷丽青; 沈革志

    2012-01-01

    选用综合农艺性状优良的粳型寒丰糯( HFwx),与同型的寒丰不育系(HFA)进行杂交、回交转育成粳型糯质新不育系寒丰糯A( HFwxA),与自主选育的粳型糯质恢复系糯恢2号配组育成了杂交粳型糯稻新组合糯杂2号.小区试验和生产示范结果表明,该组合具有高产、优质、抗性强等特点.介绍了糯杂2号的选育经过、产量表现和特征特性.%In this study, we had bred the new hybrid glutinous rice germplasm( Oryza saliva L ssp. Japonic) , named Nuoza No. 2, which was obtained by crossing between HFwxA, a japonica glutinous rice CMS which came from crossing and backcrossing between HFwx ( a japonica glutinous rice variety with good comprehensive charaters) and HFA ( a japonica rice CMS) , and a autonomously bred japonica glutinous restoring line. The results of spot experiment and demonstration trials indicated that the characters of the new combination were high - yielding. Good quality and strong resistance. The breeding and selecting process, yield performance and characteristics of Nuoza No. 2 were introduced.

  7. Burkholderia glumae en el cultivo de arroz en Costa Rica.

    OpenAIRE

    Andrea Quesada-Gonz\\u00E1lez; Fernando Garc\\u00EDa-Santamar\\u00EDa

    2014-01-01

    Burkholderia glumae en el cultivo de arroz en Costa Rica. El objetivo de este trabajo fue determinar la presencia de Burkholderia glumae en arroz en Costa Rica. La bacteria Burkholderia glumae está asociada al cultivo del arroz en el que provoca la enfermedad llamada añublo bacterial. Bajo condiciones ambientales favorables, la densidad bacteriana aumenta, lo que provoca que, bajo un sistema de regulación denominado quorum sensing, se expresen sus mecanismos de virulencia mediante la ...

  8. Comparison of rDNA Internal Transcribed Spacer Sequences in Oryza sativa L.%栽培稻种内核糖体基因的ITS序列比较研究

    Institute of Scientific and Technical Information of China (English)

    戴小军; 梁满中; 陈良碧

    2007-01-01

    以普通野生稻(O. rufipogon)为外类群,对栽培稻(O. sativa)籼亚种(O. sativassp. indica)和粳亚种(O. sativassp. japonica)18个材料的核糖体基因(rDNA)内转录间隔区(internal transcribed spacers, ITS)全序列进行比较分析.供试材料中有籼亚种品种(系)9个,粳亚种品种(系)6个,爪哇稻2个和陆稻1个.结果发现,栽培稻种内总变异位点23个,占总碱基数的5.41%;8个信息位点,占总碱基数的1.82%.籼亚种ITS全序列的长度为425~430 bp,G+C含量为74.25%~75.59%;粳亚种ITS序列总长度为425 bp,G+C含量为74.25%~75.59%.以ITS全序列构建的系统树能将栽培稻区分为籼、粳2个亚种群,爪哇稻与籼稻有较近的亲缘关系,这对研究栽培稻的演化有一定的指导意义.

  9. Genome-wide analysis of Dongxiang wild rice (Oryza rufipogon Griff.) to investigate lost/acquired genes during rice domestication

    OpenAIRE

    Zhang, Fantao; Xu, Tao; Mao, Linyong; Yan, Shuangyong; Chen, Xiwen; Wu, Zhenfeng; Chen, Rui; Luo, Xiangdong; Xie, Jiankun; Gao, Shan

    2016-01-01

    Background It is widely accepted that cultivated rice (Oryza sativa L.) was domesticated from common wild rice (Oryza rufipogon Griff.). Compared to other studies which concentrate on rice origin, this study is to genetically elucidate the substantially phenotypic and physiological changes from wild rice to cultivated rice at the whole genome level. Results Instead of comparing two assembled genomes, this study directly compared the Dongxiang wild rice (DXWR) Illumina sequencing reads with th...

  10. Construction, alignment and analysis of twelve framework physical maps that represent the ten genome types of the genus Oryza.

    Science.gov (United States)

    Kim, HyeRan; Hurwitz, Bonnie; Yu, Yeisoo; Collura, Kristi; Gill, Navdeep; SanMiguel, Phillip; Mullikin, James C; Maher, Christopher; Nelson, William; Wissotski, Marina; Braidotti, Michele; Kudrna, David; Goicoechea, José Luis; Stein, Lincoln; Ware, Doreen; Jackson, Scott A; Soderlund, Carol; Wing, Rod A

    2008-01-01

    We describe the establishment and analysis of a genus-wide comparative framework composed of 12 bacterial artificial chromosome fingerprint and end-sequenced physical maps representing the 10 genome types of Oryza aligned to the O. sativa ssp. japonica reference genome sequence. Over 932 Mb of end sequence was analyzed for repeats, simple sequence repeats, miRNA and single nucleotide variations, providing the most extensive analysis of Oryza sequence to date.

  11. Patogenicidade de Helminthosporium oryzae a algumas espécies de gramíneas Pathogenicity of Helminthosporium oryzae against some grass species

    Directory of Open Access Journals (Sweden)

    V.H. Artigiani Filho

    1995-04-01

    Full Text Available O fungo Helminthosporium oryzae é um patógeno do arroz. Devido a sua variabilidade patogênica, foi investigada a possibilidade deste fungo infectar outras gramíneas. Através de inoculação artificial, ficou demonstrada a capacidade deste patógeno provocar infecção em aveia, cana, centeio, sorgo, trigo, Brachiaria decumbens e Panicum maximum. Assim, estas espécies vegetais podem ser consideradas potenciais hospedeiros do fungo na natureza.Helminthosporium oryzae is a rice pathogen. Due to its variability in pathogenicity, the possibility of this fungus Infecting other grasses was investigated. The capacity of this pathogen was demonstrated to be able to infect oat, sugar-cane, rye, sorghum, wheat, Brachiaria decumbens and Panicum maximum through artificial inoculations. Therefore, those plant species can be considered potencial hosts for the fungus in nature.

  12. Growth Status, Grain Yield and Heavy Metals Content of Rice(Oryza sativa L.) as Affected by Biogas Slurry Application%沼液对水稻生长产量及其重金属含量的影响

    Institute of Scientific and Technical Information of China (English)

    张进; 张妙仙; 单胜道; 骆林平; 王敏艳

    2009-01-01

    Biogas slurry, in agriculture, is a typical high-quality organic material. At present in China, two hundred million tons of biogas slur-ry is producing per year. So, the secondary use of biogas slurry in agriculture production is to avoid environmental pollution and to achieve the ecological sustainable development for the livestock and poultry industries, is of great practical significance and the social meanings. So the effects of biogas slurry and chemical fertilizer application on plant growth, grain yield and heavy metals content in rice seeds of the japonica 'No.1 Ya You Hong' were studied with series of field trials. The results showed that a highest rice grain yield(55.9 g·plant~(-1)) was obtained with the application of biogas slurry as basal fertilizer and the compound K_2SO_4 fertilizer(N:P_2O_5:K_2O=15:15:15) as supplemental fertilizer. The cost of rice production was obviously low for biogas slurry as basal fertilizer though no significant grain yield improvement was observed in compare to the customarily local fertilization in which both the basal and supplemental fertilizers were K_2SO_4 compound fertilizers. Meanwhile, that biogas slurry as basal fertilizer and the compound fertilizer as supplemental fertilizer could increase markedly rice plant tillers and growth, and could enhance Fe and Zn contents and reduce significantly Pb content in rice seeds, although no significant changes in Cu and Cd contents in rice seeds were obtained. Uncertainly, the experiment results also showed that only biogas slurry application on rice production could not meet the nutrition demand for rice plant growth as well as grain yield.%沼气发酵残余液(沼液)是一种典型的优质有机物料,目前我国每年产生2亿多吨的沼液,农业生产中寻求沼液的资源化利用,对避免环境二次污染和实现畜禽养殖业的生态可持续发展具有重大的现实意义和社会意义.在田间小区试验条件下,以粳稻'亚优红一号'(Oryza

  13. Physico-chemical parameters of rice cultivars fertilized with nitrogen Características físico-químicas do grão de cultivares de arroz em função da adubação nitrogenada

    Directory of Open Access Journals (Sweden)

    Fábio Luiz Checchio Mingotte

    2012-12-01

    Full Text Available Rice (Oryza sativa L. stands out as a staple food of the world population due to important nutritional properties. However, rice physico-chemical parameters vary according to genotype and management, for example, the use of nitrogen fertilizer. The aim of this work was to evaluate physico-chemical parameters of grains from thirteen cultivars of upland rice under supplemental sprinkler irrigation and fertilized with different nitrogen rates by topdressing (0, 40, 80, 120 and 160 kg ha-1. Parameters such as milling efficiency, commercial grade, gelatinization temperature, as well as total nitrogen and crude protein contents of grains were evaluated. Nitrogen fertilization positively influences the whole grain yield, especially IAC 25 and BRS Colosso. BRS Aroma, IAC 202, IAC 500, BEST 2000, Curinga and Baldo have a high percentage of broken grains. The cultivars Baldo and Carnaroli (appropriate for Italian cuisine, IAC 25 and Caiapó are classified as long grain and the others, as long-thin. The cultivars, except CIRAD 141, displayed grain gelatinization temperature between intermediate and low, providing quick cooking. The grain content protein varies among cultivars, and it can be increased with nitrogen fertilization. O arroz (Oriza sativa L. destaca-se como alimento básico da população mundial devido suas importantes propriedades nutricionais. No entanto, as características físico-químicas do grão de arroz variam com a cultivar, podendo ainda ser influenciadas pelo manejo cultural, a exemplo da adubação nitrogenada. O presente trabalho teve por objetivo avaliar características físico-químicas dos grãos de treze cultivares de arroz de terras altas, sob irrigação suplementar por aspersão, submetidas a diferentes doses de nitrogênio (0, 40, 80, 120 e 160 kg ha-1 em cobertura. Foram avaliados os componentes de rendimento de engenho, assim como a classe comercial, temperatura de gelatinização, teor de nitrogênio total e

  14. 利用粳稻基因组DNA和Cot-1 DNA探针对普通野生稻和亚洲栽培稻的比较分析%Comparative Analysis of Oryza rufipogon Griff. and Oryza sativa with Nipponbare Genomic DNA and Cot-1 DNA Probes

    Institute of Scientific and Technical Information of China (English)

    覃瑞; 李智; 刘虹; 陈雁; 蔡朝晖; 李刚

    2012-01-01

    Using genomic DNA and Cot-1 DNA of Nipponbare as probes, GISH( genimic in situ hybridization) and Cot-1 DNA FISH (fluorescence in situ hybridization ) were adopted to analyse the genomes of japonica Nipponbare, indica Guangluai 4 and Oryza rufipogon Griff. karyotype. Homologous clustering and comparative study of the above 3 genomes were also made. The results indicated that the distribution and coverage of genomic DNA and Cot-1 DNA probes in 3 rice genomes were very similar. The coverage percentage of Cot-1 DNA in Nipponbare, Guangluai 4 and Oryza rufipogon Griff. were (47.13 ±0. 18)%, (45.89 ±0.22)% and (44.24 ±0.21 )% respectively, demonstrating the high homology and close relationship among them. The highly and moderately repetitive DNA sequences played an important role in the evolution of rice species and indica-japonica genetic differentiation, since their hybridization signal distribution had their own characteristics . The chromosomes which contain less highly and moderately repetitive DNA sequences( No. 2,5,8 ) are more active in rice genome' s evolution.%以粳稻日本晴基因组DNA和Cot-1 DNA为探针,分别对日本晴、籼稻广陆矮4号和普通野生稻的染色体组进行了基因组原位杂交(GISH)和Cot-1 DNA荧光原位杂交(FISH)分析,并对3种染色体组进行了同源聚类和比较研究.结果表明:粳稻基因组DNA和Cot-1 DNA探针信号在3种水稻染色体组中的分布状况和覆盖率相似,Cot-1 DNA的覆盖率分别为(47.13±0.18)%、(45.89±0.22)%、(44.24±0.21)%,3种水稻基因组同源性高,亲缘关系接近.Cot-1 DNA在3种水稻染色体上的杂交信号分布各有特点,中高度重复序列的变异在普通野生稻向栽培稻进化和亚洲栽培稻籼、粳分化过程中具有重要意义,中高度重复序列含量较低的2、5、8号染色体是水稻染色体组进化过程中相对活跃的成分.

  15. 利用BAC-ISH对抗性基因Bph3物理定位及水稻第四染色体着丝粒识别的研究%Physical Location of Resistance Gene, Bph3 and Identification of Chromosome 4 in Oryza sativa with BAC-ISH

    Institute of Scientific and Technical Information of China (English)

    覃瑞; 鄢彗民; 宋运淳

    2003-01-01

    用水稻BAC克隆21K19作探针进行了ISH.这个克隆是由第4染色体着丝粒连锁的RFLP标记RZ69筛选得到.在Cot-l DNA 封阻条件下,DAB均获得第4染色体着丝粒区和间期染色质上的一对信号.这一方法不仅可用于特定染色体识别,而且可区分其长臂和短臂.因此,还获得了第四染色体的臂比值以作为它的形态识别依据.由于RFLP标记RZ69与抗性基因Bph3紧密连锁,从而确定抗性基因Bph3位于水稻第4染色体着丝粒处.相对于常规的RFLP-FISH,BAC-ISH可以提高5倍以上的检出率.%Rice chromosome 4 was identified by ISH of centromere-linked BAC clone 21K19. This clone was screened by a single copy RFLP marker RZ69. It only showed a pair of signal spots on centromere regions of each member of one chromosome pair, i.e.,chromosome 4 as well as interphase chromatin under the blocking of rice Cot-1 DNA with DAB detection system. This is applicable not only for the recognizing of chromosome 4 but also for the distinguishing of its long and short arms. Therefore, we also obtained the arm ratio data of chromosome 4 for its morphological identification. From the molecular genetic map, we know that the RZ69 linked to resistance gene, Bph3, so in this study, resistance gene, Bph3 was physical located in centromere region of chromosome 4 in Oryza. sativa.Compared with the routine FISH of single copy RFLP marker can increase the detection rate more than five times.

  16. (N-[2-(2-氧-1-咪唑烷基)乙基]-N '-苯基脲(EDU)对环境臭氧胁迫下的水稻和小麦生长的影响%Effect of Ethylenediurea (EDU) on Growth of Ozone-stressed Rice ( Oryza sativa L.) and Wheat (Triticum aestivum L.)

    Institute of Scientific and Technical Information of China (English)

    佟磊; 王效科; 郑飞翔; 耿春梅; 王玮; 殷宝辉; 隋立华; 王琼; 冯宗炜

    2011-01-01

    通过对作物定期喷施不同浓度(0、150、300和450 mg·L-1)的N-[2-(2-氧-1-咪唑烷基)乙基]-N'-苯基脲(ethy lenediurea,EDU)溶液,研究EDU对环境O3胁迫下水稻“粤晶丝苗2号”(Oryza sativa L.Yuejingsi 2)和小麦“北农9549”(Triticum aestivum L.Beinong 9549)生长的影响.结果表明:EDU的作用效果随观测时期和处理水平的变化而变化.水稻实验前期,300 mg·L-1 EDU处理的植株地上生物量明显高于对照;但实验末期,各EDU处理下的水稻地上生物量、各器官生物量和单株粒重均低于对照,其中450 mg·L-1 EDU处理和对照稻穗生物量的差异达到了显著水平.在小麦实验中,除实验中期150mg·L-1 EDU处理外,各观测时期EDU处理下的植株地上生物量均低于对照,尤其在实验末期,300 mg·L-1EDU处理下的小麦地上生物量和穗生物量的下降程度达到了显著水平.由此可知:两个作物品种对环境O3可能具有一定的耐性,因此,EDU的保护作用未能体现;高浓度EDU溶液对作物可能具有一定的毒性,O3胁迫下EDU对植物体的作用效果可能是其抗氧化性和毒性的综合体现.

  17. Efeitos do atraso na colheita e do período de armazenamento sobre o rendimento de grãos inteiros de arroz de terras altas Effect of harvest moisture and storage period upon the yield of whole grains in the upland rice processing

    Directory of Open Access Journals (Sweden)

    Gilson José Teixeira Ribeiro

    2004-10-01

    Full Text Available O presente trabalho foi desenvolvido com o objetivo de avaliar os efeitos do atraso da colheita sobre o rendimento de grãos inteiros no beneficiamento de 12 cultivares e linhagens de arroz, bem como diferentes períodos de armazenamento sobre a recuperação da porcentagem de grãos inteiros. Para tanto, procedeu-se à avaliação da umidade dos grãos e ao rendimento de grãos inteiros de amostras de arroz colhidas aos 0, 7, 14, 21 e 28 dias após a maturação. Foram armazenadas também amostras de grãos para determinação do rendimento de grãos inteiros aos 30, 60, 90, 120 e 150 dias após a colheita de cada cultivar e linhagem. Os maiores rendimentos de grãos inteiros são obtidos quando a colheita é realizada com umidade em torno de 20%; a cultivares Caiapó e a linhagem CNAs 8983 toleram atraso na colheita sem maiores prejuízos ao rendimento de grãos inteiros. O armazenamento dos grãos por mais de 90 dias mantém ou favorece o rendimento de grãos inteiros no beneficiamento.The present work was develop with a view to evaluating the effect of the delay of harvest on grain moisture and whole grain yield in the processing of 12 rice cultivars as well as the different storage periods upon the recovery of the percentage of whole grains of samples of rice (Oryza sativa L. harvested at 0, 7, 14, 21 and 28 days after maturation, respectively. Grain samples were also stored determination of the yield of whole grains at 30, 60, 90, 120 and 150 days after harvest of each cultivar. The results showed that the highest yield of whole grains and obtained when harvest is performed with moisture around 20%, the cultivars Caiapó and CNAs 8983 tolerate delay in harvest without further damages to grain yield and the grains for over 90 days maintains of favors the yield of whole grains in processing.

  18. Genome evolution of Oryza

    Directory of Open Access Journals (Sweden)

    Tieyan Liu

    2014-01-01

    Full Text Available The genus Oryza is composed of approximately 24 species. Wild species of Oryza contain a largely untapped resource of agronomically important genes. As an increasing number of genomes of wild rice species have been or will be sequenced, Oryza is becoming a model system for plant comparative, functional and evolutionary genomics studies. Comparative analyses of large genomic regions and whole-genome sequences have revealed molecular mechanisms involved in genome size variation, gene movement, genome evolution of polyploids, transition of euchromatin to heterochromatin and centromere evolution in the genus Oryza. Transposon activity and removal of transposable elements by unequal recombination or illegitimate recombination are two important factors contributing to expansion or contraction of Oryza genomes. Double-strand break repair mediated gene movement, especially non-homologous end joining, is an important source of non-colinear genes. Transition of euchromatin to heterochromatin is accompanied by transposable element amplification, segmental and tandem duplication of genic segments, and acquisition of heterochromatic genes from other genomic locations. Comparative analyses of multiple genomes dramatically improve the precision and sensitivity of evolutionary inference than single-genome analyses can provide. Further investigations on the impact of structural variation, lineage-specific genes and evolution of agriculturally important genes on phenotype diversity and adaptation in the genus Oryza should facilitate molecular breeding and genetic improvement of rice.

  19. Screening of gamma radiation-induced pathogen resistance rice lines against Xanthomonas oryzae pv. oryzae

    Energy Technology Data Exchange (ETDEWEB)

    Lim, Chan Ju; Lee, Ha Yeon; Kim, Woong Bom; Ahmad, Raza; Moon, Jae Sun; Kwon, Suk Yoon [Korea Research Institute of Beoscience and Biotechnology, Daejeon (Korea, Republic of); Kim, Dong Sub [Korea Atomic Energy Research Institute, Jeongeup (Korea, Republic of)

    2010-09-15

    Bacterial blight is one of the most serious diseases of rice (Oryza sativa L.), and it has been known that Xanthomonas oryzae pv. oryzae (Xoo) causes this disease symptom. To develop resistance rice cultivars against Xoo, 3,000 lines of M{sub 3}, which were irradiated with gamma ray, were tested by 'scissor-dip method' primarily, and 191 putative resistant lines were selected. In M{sub 4} generation, these lines were screened again with various ways such as measuring of symptom of bacterial blight in leaf, number of tiller, fresh weight, and phenotypic segregation ratio in next generation. Finally, six resistance lines were selected. RT-PCR analysis revealed that these lines displayed high level of R-genes such as Xa21, Pi36, and Pi-ta. These results indicate that mutations by gamma ray cause disruptions of regulatory signal transduction systems of these R-genes. Furthermore, these selected mutants could be useful for the development of rice cultivar resistant to Xoo.

  20. Exploring the power of rice (O. sativa x O. rufipogon) chromosome segment substitution line libraries

    Science.gov (United States)

    Transgressive variation was reported as an increase in grain yield for several rice (Oryza sativa x O. rufipogon) advanced backcross mapping populations. The objective of this study was to develop chromosome segment substitution line (CSSL) libraries to further dissect the reported transgressive var...

  1. PENGARUH RHIZOPUS ORYZAE DAN ASPERGILLUS ORYZAE TERHADAP KUALITAS KECAP

    Directory of Open Access Journals (Sweden)

    Dewi Sabita Slamet

    2012-11-01

    Full Text Available Telah diteliti pengganti fermentasi mikroorganisme Aspergillus oryzae Rhyzopus oryzae dan campuran Aspergillus dan Rhyzopus oryzae, dengan perendaman dalam larutan garam 20% dalam waktu yang berbeda terhadap kualitas kecap.Lamanya perendaman dalam larutan garam 20% yang berbeda menghasilkan kadar protein kecap yang berbeda. Aspergillus oryzae lebih baik dalam menghasilkan enzima protease dari pada Rhyzopus oryzae.Uji organoleptik menunjukkan perbedaan tidak bermakna dalam hal rasa maupun aroma antar kecap yang dibuat dengan strain jamur yang berlainan serta waktu perendaman yang berbeda. Untuk membuat kecap, sebaiknya dilakukan perendaman dalam larutan garam 20% selama 14 hari.

  2. Modificação química e física do amido de quirera de arroz para aproveitamento na indústria de alimentos Chemical and physical modification of broken rice starch (Oryza sativa L. for use in food industry

    Directory of Open Access Journals (Sweden)

    Valéria Maria Limberger

    2008-01-01

    Full Text Available The study evaluated the efficiency of chemical (phosphorylation and physical (extrusion modifications of the starch of broken rice. Results demonstrated a reduction in the moisture content of extruded and phosphorylated broken rice and an increase in the ash content of phosphorylated broken rice. Both phosphorylation and extrusion increased cold water binding capacity, swelling power, and solubility. Extruded and phosphorylated pastes were stable under refrigeration, but only extruded paste was stable when submitted to freezing. Phosphorylated paste had the lowest viscosity and the highest stability during heating, while the extruded one gelatinized without heating, but had higher losses during heating.

  3. Efeitos de diferentes manejos de água no estabelecimento de plantas de arroz no sistema pré-germinado Effects of different water management on the plants settlement of the pre-germinated rice seeds system

    Directory of Open Access Journals (Sweden)

    Renato Luiz Bertoni Lauretti

    2001-09-01

    Full Text Available O trabalho objetivou avaliar o efeito de diferentes manejos de água adotados na semeadura do arroz (Oryza sativa L., em sistema pré-germinado, no estabelecimento das plantas e nos componentes vegetativos. O experimento foi conduzido no ano agrícola de 1995/96 em caixas de cimento amianto com capacidade de 500 L, contendo solo Aluvial Eutrófico de várzea, na Fazenda Experimental Lageado, no Município de Botucatu, SP. A cultivar empregada foi a IAC 102, e os tratamentos foram sete manejos de água. A semeadura de sementes pré-germinadas em solo saturado ou em lâmina de água limpa ou turva e sua retirada três dias após, apresentaram resultados semelhantes quanto à população e ao estabelecimento das plantas. A retirada da lâmina de água três dias após a semeadura resultou em maior população e fixação de plantas do que a permanência da lâmina por período maior de sete dias. A manutenção da lâmina da água limpa ou turva afetou a população de plantas e prejudicou o seu desenvolvimento inicial, causando seu estiolamento com significativa redução da produção de matéria seca. A turvação da água antes da semeadura reduziu o desenvolvimento e a população de plantas quando a lâmina de água não foi eliminada por evaporação ou retirada três dias após a semeadura.This research was carried out for studying the effects of different water managements during the drilling of pre-germinated rice (Oryza sativa L. seeds system, on the plants settlement. The experiment was settled in the harvest 1995/96, on 500 L capacity amianthus cement boxes, with alluvial soil, at Lageado Experiment Station, Botucatu county, SP, Brazil. Pre-germinated rice seeds from IAC 102 cultivar were drilled and adjusted at seven different water management treatments. Pre-germinated rice seeds drilled in saturated soil or in water clean or dim with water removed out three days after, showed similar results on population and plant settlement. The

  4. Cytological analysis for meiotic patterns in wild rice (Oryza rufipogon Griff.

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    Sutanu Sarkar

    2017-03-01

    Full Text Available The present report explores the chromosomal patterns during meiosis as a fundamental cell division study in wild rice (Oryza rufipogon Griff.. Cytological assays revealed normal meiosis in most cases but in some instances meiotic abnormalities such as weak desynapsis, univalent and quadrivalent formation, translocation, spindle abnormalities and precocious movement of chromosomes were noticed. Interestingly, this wild species also has the bi-nucleoli in first meiotic stages alike the cultivated species of Oryza (O. sativa. The present investigation emphatically addresses the questions of high adaptability of wild rice supported by high pollen fertility for their potential to strong fitness in nature.

  5. Rice (Oryza) hemoglobins

    Science.gov (United States)

    Hemoglobins (Hbs) corresponding to non-symbiotic (nsHb) and truncated (tHb) Hbs have been identified in rice (Oryza). This review discusses the major findings from the current studies on rice Hbs. At the molecular level, a family of the nshb genes, consisting of hb1, hb2, hb3, hb4 and hb5, and a sin...

  6. 施硅对高浓度Cd污染土壤中水稻植株Cd积累与分配的调控%Regulation of Silicon Application on Cadmiun Accumulation and Translocation in Rice (Oryza sativa.L) Grown Under High Concentration Cadmium-Polluted Soil

    Institute of Scientific and Technical Information of China (English)

    张世浩; 蔡昆争; 王维; 黄飞; 蔡一霞

    2016-01-01

    为了评估施硅处理对Cd在水稻(Oryza sativa.L)体内迁移的影响,通过外源添加Cd(CdCl2)制成w(Cd)为50、100 mg/kg的污染土壤,采用盆栽试验研究不同施硅量[w(Si)分别为0、28、56 mg/kg]对Cd污染土壤中水稻(以华航丝苗和黄华占为例)植株中Cd积累与分配的影响.结果表明:施硅处理可明显影响水稻根部w(Cd),表现为增加华航丝苗根部w(Cd)、降低黄花占根部w(Cd),但两个品种根部Cd累积量均呈增加趋势.施硅处理后华航丝苗和黄华占的叶、谷壳、糊粉层及精米中w(Cd)、Cd累积量均呈降低趋势,并且在施硅量为56 mg/kg时显著降低;施硅处理显著降低了华航丝苗和黄华占茎中w(Cd)以及华航丝苗茎中Cd累积量,同时增加了黄花占茎中Cd累积量.施硅可显著降低精米中w(Cd),在w(Cd)为50和100 mg/kg的Cd污染水平下,华航丝苗和黄华占精米中w(Cd)较未施硅处理下的最大降幅分别达到32.49%、53.77%和24.73%、20.67%.施硅对水稻植株各器官的Cd富集系数、转移系数和分配系数都有一定影响,施硅处理下水稻植株地上部各器官的Cd富集系数和转移系数均呈降低趋势,根部Cd分配比例显著增加.研究显示,施硅对高浓度Cd污染土壤中水稻植株Cd积累与分配有一定调节作用,并因土壤中w(Cd)、施硅量、水稻品种及稻株器官的不同而存在差异.

  7. Grain Accumulation of Selenium Species in Rice (Oryza sativa L.)

    Energy Technology Data Exchange (ETDEWEB)

    Carey, Anne-Marie; Scheckel, Kirk G.; Lombi, Enzo; Newville, Matt; Choi, Yongseong; Norton, Gareth J.; Price, Adam H.; Meharg, Andrew A. (EPA); (U. South Australia); (Aberdeen); (UC)

    2012-09-05

    Efficient Se biofortification programs require a thorough understanding of the accumulation and distribution of Se species within the rice grain. Therefore, the translocation of Se species to the filling grain and their spatial unloading were investigated. Se species were supplied via cut flag leaves of intact plants and excised panicle stems subjected to a {+-} stem-girdling treatment during grain fill. Total Se concentrations in the flag leaves and grain were quantified by inductively coupled plasma mass spectrometry. Spatial accumulation was investigated using synchrotron X-ray fluorescence microtomography. Selenomethionine (SeMet) and selenomethylcysteine (SeMeSeCys) were transported to the grain more efficiently than selenite and selenate. SeMet and SeMeSeCys were translocated exclusively via the phloem, while inorganic Se was transported via both the phloem and xylem. For SeMet- and SeMeSeCys-fed grain, Se dispersed throughout the external grain layers and into the endosperm and, for SeMeSeCys, into the embryo. Selenite was retained at the point of grain entry. These results demonstrate that the organic Se species SeMet and SeMeSeCys are rapidly loaded into the phloem and transported to the grain far more efficiently than inorganic species. Organic Se species are distributed more readily, and extensively, throughout the grain than selenite.

  8. Transgenic Expression of the Recombinant Phytase in Rice (Oryza sativa)

    Institute of Scientific and Technical Information of China (English)

    LIU Qiao-quan; LI Qian-feng; JIANG Li; ZHANG Da-jiang; WANG Hong-mei; GU Ming-hong; YAO Quan-hong

    2006-01-01

    In most of the cereal crop, phytic acid is the main storage form of phosphorus, which can decrease the bioavailability of phosphate. Transgenic expression of phytase is regarded as an efficient way to release phosphate from phytate in transgenic plants.In this study, a plant expression vector, containing the recombinant phytase gene driven by the maize ubiquitin (Ubi) promoter was constructed and introduced into an elite rice variety via Agrobacterium-mediated transformation. During the experiment, a total of 15 independent transgenic rice lines were regenerated. The results of PCR and Southern blot indicated that the target gene was integrated into the genome of transgenic rice plants. Moreover, the RT-PCR analysis of total RNAs extracted from the immature seeds of several transgenic lines showed that the recombinant phytase gene could be normally expressed. The inorganic phosphorus content, both in the mature seeds and the leaf was significantly higher in the transgenic plants than in the untransformed wild type.

  9. Identification and Characterization of MicroRNAs in Oryza sativa

    Institute of Scientific and Technical Information of China (English)

    Jia-FuWANG; HuiZHOU; Dai-RongXU; Liang-HuQU

    2004-01-01

    MicroRNAs (miRNAs) are a large family of noncoding RNA of 20-25 nt whose function is to regulate gene expression in post-transcription.These RNA molecules of 20-25 nt are complementary to the 3'-untranslated regions (UTRs) of target mRNA and direct negative post-transcriptional regulation through RNA duplex formation. The first endogenous about 22 nt RNA was lin-4 and let-7, both of which were key

  10. In vitro screening for salt tolerance in Rice (Oryza sativa

    Directory of Open Access Journals (Sweden)

    P .Shanthi, S. Jebaraj and S. Geetha

    2010-07-01

    Full Text Available An experiment was conducted to study the performance of rice genotypes for salt tolerance under in vitro condition. Sevengenotypes include salt tolerant (Pokkali, CSR 10, TRY 1 and TRY2, moderately tolerant to salt (White Ponni and BPT5204 and susceptible (IR 29 were used for this study through embryo culture technique. Callus was initiated in MS medium+ 2 mgl-1 2,4D + 0.5 mgl-1 Kin and different concentration of Nacl viz., 50mM, 100mM and 150mM were added with themedium to create salt stress. Statistical analysis revealed that all the genotypes and treatments and their interaction effectwere significantly different from each other. Among the seven genotypes studied Pokkali was significantly superior for callusinduction with 62 % followed by CSR 10, TRY(R 2 and TRY1 with 58 %, 54.5 % and 53 % respectively. Pokkali registeredthe highest level of callus development (35% even at high level of Nacl stress (150mM followed by TRY 2 (25% and CSR10 (24%. When the callus for these genotypes were transferred to regeneration media in the same level of Nacl stress(50mm, 100mM and 150mM highest level of regeneration of green islets was realized in Pokkali (37.5 % followed by CSR10 (31 % and TRY (R2 (25 %. From these observation, it was concluded that somaclones obtained form the varieties ofPokkali, CSR 10 and TRY(R 2 could be evaluated further in the natural field condition to develop a high yielding salttolerant varieties or could be used as a donor for the development of salt tolerant varieties. This in vitro screening techniquewith different concentration of Nacl stress could also be used as a goof screening technique for salt tolerances rather than thefield screening because of less time, little space and less labour and the results also very accurate than the field screening.

  11. Pectin enhances rice (Oryza sativa) root phosphorus remobilization.

    Science.gov (United States)

    Zhu, Xiao Fang; Wang, Zhi Wei; Wan, Jiang Xue; Sun, Ying; Wu, Yun Rong; Li, Gui Xin; Shen, Ren Fang; Zheng, Shao Jian

    2015-02-01

    Plants growing in phosphorus (P)-deficient conditions can either increase their exploration of the environment (hence increasing P uptake) or can solubilize and reutilize P from established tissue sources. However, it is currently unclear if P stored in root cell wall can be reutilized. The present study shows that culture of the rice cultivars 'Nipponbare' (Nip) and 'Kasalath' (Kas) in P-deficient conditions results in progressive reductions in root soluble inorganic phosphate (Pi). However, Nip consistently maintains a higher level of soluble Pi and lower relative cell wall P content than does Kas, indicating that more cell wall P is released in Nip than in Kas. P-deficient Nip has a greater pectin and hemicellulose 1 (HC1) content than does P-deficient Kas, consistent with the significant positive relationship between pectin and root-soluble Pi levels amongst multiple rice cultivars. These observations suggest that increased soluble Pi might result from increased pectin content during P starvation. In vitro experiments showed that pectin releases Pi from insoluble FePO4. Furthermore, an Arabidopsis thaliana mutant with reduced pectin levels (qua1-2), has less root soluble Pi and is more sensitive to P deficiency than the wild type (WT) Col-0, whereas NaCl-treated WT plants exhibit both an increased root pectin content and an elevated soluble Pi content during P-starvation. These observations indicate that pectin can facilitate the remobilization of P deposited in the cell wall. This is a previously unknown mechanism for the reutilization of P in P-starved plants.

  12. A mutable slender glume gene in rice (Oryza sativa L.)

    Energy Technology Data Exchange (ETDEWEB)

    Okumoto, Yutaka; Teraishi, Masayosi; Tanisaka, Takatoshi [Kyoto Univ. (Japan). Graduate School of Agriculture; Yamagata, Hirotada; Horibata, Akira [Kinki Univ., Uchida, Osaka (Japan)

    1999-07-01

    Identification of genetic factors involved in the mutability of slender glume was made for further understanding of active transposable elements or epigenetic transformation in the rice genome. The results indicated that slender glume mutation is induced with a single recessive mutable gene, slg. The rate of reverse mutation was little affected by crossing, backcrossing, genetic background or cytoplasmic factors. To examine the inheritance of mutability in slg, the reverse mutation rate was evaluated using the progenies of F{sub 2}, F{sub 3}, BC{sub 1}F{sub 2} and BC{sub 1}F{sub 3} SGPs. It was suggested that background and cytoplasmic factors did not have noticeable effects on the reverse mutation frequency (RMF) thus on the mutability of slg. In most cases, the lines derived from slender glume panicles included slender glume plants (SGPs) in a ratio of more than 90%, while those derived from normal glume panicles did in a ratio of 10-20%. Thus, the genotype was concluded as slg/slg for the slender panicles and slg/+ for the normal ones, suggesting that the outer layer of the normal glumes in chimeric plants (CPs) has a genotype slg/+, whereas the inner one including embryo has a genotype of slg/slg. The appearance of such chimera plant is a clear indication of the occurrence of reverse mutation during mitosis as well as meiosis. RFLP linkage analysis showed that slg locus was located between XNpb33 and R1440 with the recombination values of 3.1 and 1.0 cM, respectively. The slg locus was identified to localize on the overlapping region of two YAC clones, Y1774 and Y3356 and the length of this region was assumed to be less than 280 kb. (M.N.)

  13. Studies on wide compatibility in rice (Oryza sativa L.

    Directory of Open Access Journals (Sweden)

    M. Vaithiyalingan and N. Nadarajan

    2010-06-01

    Full Text Available The present investigation was carried out to screen different rice sub-species for wide compatibility (WC and to evaluateF2 populations of selected crosses to study the genetics of WC. Among the three criteria followed for screening of WCVsviz., pollen fertility per cent of hybrids, spikelet fertility per cent of hybrids and the spikelet fertility per cent of hybrids aswell as tester parents, the third criteria appeared to be effective. Based on spikelet fertility per cent of hybrids as well astester parents, seven out of 15 lines viz., Dular and ASD 16 (indicas; WCR 6, IR 65600-32-4-6-1, IR 65601-120-3-5, IR66158-38-3-2-1 and IR 67323-46-2-1 (tropical japonica were adjudged as WCVs. The F2 segregation in seven crosses forspikelet fertility and semi-sterility were in agreement with trigenic complementary ratio (45:19. Hence, it was concludedthat the genetic basis of inter sub-specific sterility of cultivated rice is complex.

  14. Sequence analysis of Xa21 gene promoter in rice (Oryza sativa ‘Nipponbare')and its expression characteristics under different conditions%水稻Xa21基因启动子序列分析及其在不同条件下的表达特征

    Institute of Scientific and Technical Information of China (English)

    牟少亮; 刘志钦; 赖燕; 蔡汉阳; 何水林

    2012-01-01

    以水稻品种‘日本晴’(Oryza sativa‘ Nipponbare’)为实验材料,根据GenBank上公布的同品种水稻的基因组DNA序列设计1对引物,对水稻Xa21基因启动子进行克隆并测序,通过PCR扩增获得的Xa21基因启动子序列长1 982 bp,其中除包含启动子基本元件外,还包含一些与逆境信号相关的元件(GCC-box、A-box、TC-rich repeats、MBS、LTR和W-box等).利用GUS组织化学染色和定量分析方法,研究了转基因水稻T1代株系不同器官和发育阶段Xa21基因启动子的表达特异性及其在不同逆境和激素处理条件下的表达特征,结果显示:在转基因水稻的叶、茎和根部均能检测到GUS活性,但根部GUS活性最高,特别是在根尖的中柱区活性最强;随苗龄增长(3叶期、5叶期和8至9叶期)叶片中GUS活性逐渐增加,8至9叶期GUS活性最高;机械损伤和100 μmol ·L-1茉莉酸甲酯(MeJA)处理可使叶片中GUS活性显著或极显著提高,而干旱、500 μmol·L-1水杨酸(SA)和100 μmol·L-1脱落酸(ABA)处理则对叶片中GUS活性无明显影响.研究结果表明:外界逆境胁迫对水稻Xa21基因启动子的表达有诱导作用;该启动子的表达受水稻发育阶段的调控并具有一定的器官组织特异性,在根中的表达量最高;其介导的抗病反应依赖于茉莉酸(JA)信号通路.%Taking cultivar' Nipponbare' of rice (Oryza sativa L.) as the experimental materials, Xa21 gene promoter was cloned and sequenced by a pair of primers designed on the basis of genomic DNA sequence of same cultivar published on GenBank.Xa21 gene promoter with sequence length of 1 982 bp is obtained by PCR amplification, in which, except with promoter basic elements, it also contains some elements related to stress signals, such as GCC-box, A-box, TC-rich repeats, MBS, LTR and W-box, etc.By means of GUS histochemical staining and quantitative assay methods, expression specificity of Xa21 gene promoter in different organs and

  15. Effects of Biofertilizers Combined with Different Soil Amendments on Potted Rice Plants Efecto de Biofertilizantes Combinado con Enmiendas del Suelo sobre Plantas de Arroz en Macetas

    OpenAIRE

    Arshad Javaid

    2011-01-01

    This pot study investigated the effect of the combined application of two commercial biofertilizers viz. Biopower and EM (Effective Microorganisms) on rice (Oryza sativa L.) growth and yield in soils amended with farmyard manure, green manure, and NPK fertilizers. Biopower is a product of the Nuclear Institute for Biotechnology and Genetic Engineering (NIBGE), Pakistan, which contains species of associative and endophytic diazotrophs. EM (effective microorganisms), a product developed by Japa...

  16. SSR Analysis on Diversity of AA Genome Oryza Species in the Southeast and South Asia

    Institute of Scientific and Technical Information of China (English)

    LU Jian-zhen; ZHANG Xiao-li; WANG Hai-gang; YUAN Xiao-ping; XU Qun; WANG Yi-ping; YU Han-yong; TANG Sheng-xiang; WEI Xing-hua

    2008-01-01

    To investigate genetic diversities among the AA genome Oryza species in the Southeast and South'Asia, a total of 428 accessions of the AA genome Oryza species were genotyped using 36 simple sequence repeats (SSR) markers distributed throughout the rice genome. All of the 36 SSR markers generated polymorphic bands, revealing 100% polymorphism. The number of alleles per locus ranged from 3 to 17 with the mean of 8.6. The Nei's genetic diversity index (He) ranged from 0.337 at RM455 to 0.865 at RM 169 with an average value of 0.650. The genetic diversity of the AA genome Oryza species in the Southeast Asia was obviously higher than that in the South Asia. Among the detected Oryza species in the South and Southeast Asia, O. rufipogon showed the highest genetic diversity. Meanwhile, a higher genetic differentiation (Fst) was found among the detected Oryza species in the Southeast Asia than in the South Asia. The Fst value between O. nivara and O. sativa was the highest. The results from the number of specific alleles, specific loci, and allele frequency confirmed the greater genetic variation among the detected species. In addition, the specific allele in RM161 displayed higher frequency (0.193), suggesting its important function in identifying Oryza species of AA genome.

  17. WRKY transcription factor genes in wild rice Oryza nivara.

    Science.gov (United States)

    Xu, Hengjian; Watanabe, Kenneth A; Zhang, Liyuan; Shen, Qingxi J

    2016-08-01

    The WRKY transcription factor family is one of the largest gene families involved in plant development and stress response. Although many WRKY genes have been studied in cultivated rice (Oryza sativa), the WRKY genes in the wild rice species Oryza nivara, the direct progenitor of O. sativa, have not been studied. O. nivara shows abundant genetic diversity and elite drought and disease resistance features. Herein, a total of 97 O. nivara WRKY (OnWRKY) genes were identified. RNA-sequencing demonstrates that OnWRKY genes were generally expressed at higher levels in the roots of 30-day-old plants. Bioinformatic analyses suggest that most of OnWRKY genes could be induced by salicylic acid, abscisic acid, and drought. Abundant potential MAPK phosphorylation sites in OnWRKYs suggest that activities of most OnWRKYs can be regulated by phosphorylation. Phylogenetic analyses of OnWRKYs support a novel hypothesis that ancient group IIc OnWRKYs were the original ancestors of only some group IIc and group III WRKYs. The analyses also offer strong support that group IIc OnWRKYs containing the HVE sequence in their zinc finger motifs were derived from group Ia WRKYs. This study provides a solid foundation for the study of the evolution and functions of WRKY genes in O. nivara.

  18. Tithonia diversifolia, Moringa oleifera and Piper auritum: Alternatives for the control of Sitophilus oryzae

    Directory of Open Access Journals (Sweden)

    Leticia Jiménez Álvarez

    2016-07-01

    Full Text Available With the objective to determine the effect exerted by vegetable powders of Tithonia diversifolia (Hemsl A. Gray, Moringa oleifera (Lam y Piper auritum Kunth on Sitophilus oryzae L., this experiment was performed. In the execution, adult insects were taken to evaluate the increase of them. Petri dishes of 9 cm with 10 insects were used inside additionally 5 g of rice (Oryza sativa L. and 0.4 g of powder was added botanical species (T. diversifolia, M. oleifera, P. auritum previously dried at 40 0C for 72 hours and finely ground. At 40 days the test mounted, the number of insects present per plate was counted, and after testing, Z Multiple Comparison was performed using the software Stadistix. The results allowed us to conclude that these plant species are a viable alternative for the control of S. oryzae.

  19. Variação diária da emissão de metano em solo cultivado com arroz irrigado no Sul do Brasil Diurnal variation of methane emission from a paddy field under rice cultivation in the Southern Brazil

    Directory of Open Access Journals (Sweden)

    Falberni de Souza Costa

    2008-10-01

    de arroz no Sul do Brasil (região litorânea e Sul do RS e região Sul de SC pelo fato destas apresentarem comportamento diário similar de radiação solar e de temperatura do ar. A adequação do procedimento deve ser confirmada para as demais sub-regiões produtoras do Sul do Brasil, mas principalmente para outras regiões que apresentem condições ambientais diversas.Methane (CH4 has a global warming potential 23 to 32 times higher than carbon dioxide and its emission rate in rice fields should vary daily with water and soil temperature, and plant metabolism. This study aimed to identify the appropriate time interval for air sampling in order to quantify the mean daily CH4 emission rate, key information to future studies aiming the derivation of regional indexes of CH4 emission. Three campaigns were performed to evaluate diurnal variation in CH4 emissions (3h interval from continuously flooded rice (Oryza sativa L. cv. 'IRGA-422 CL' fields at different crop stages (panicle differentiation and ripening and management systems (conventional tillage-CT and no-tillage-NT during 2002/2003 crop season in long-term experiment at the Instituto Rio Grandense do Arroz (IRGA, in Cachoeirinha, RS, Brazil. Static chamber method was used and the air samples collected with polystyrene syringes were analyzed by gas chromatography. Methane emission showed a same diurnal pattern in the three campaigns in the both tillage systems. The maximum range of emission (8-33mg CH4m-2 h-1 was observed in the early afternoon (12.00 to 15.00p.m. followed by a decline to a minimum around midnight to next morning (4-19mg CH4 m-2 h-1, in which fluxes were related to flood water temperature (campaign 1 and 3 or soil temperature (campaign 2. Taking into account the daily emission curves, plus operational aspects like chromatographic analysis of samples into the 24h period after air sampling, the time interval from 9.00 to 12.00a.m. is recommended to studies aiming to evaluate mean daily CH4

  20. The Effect of Triazine Herbicide Atrazine on the Chromosome Structure, Protein Content and Compositions in Oryza sativa L.%三氮苯类除草剂对水稻染色体结构、蛋白质含量及组分的影响

    Institute of Scientific and Technical Information of China (English)

    彭永康; 邹灵芝; 王振英; 金洪英; 冯正勇

    2006-01-01

    比较研究了不同浓度三氮苯类除草剂对水稻幼苗生长、叶绿素及可溶性蛋白质含量、根尖分生组织染色体结构、分生组织和叶绿体蛋白质组分的影响.结果表明,在0.1 mg /L Atrazine处理水稻后培养1周,幼苗高度由(10.8±1.7 ) cm(对照)降至 (8.2±0.7) cm,叶绿素含量由(1.07±0.013) mg/g FW(对照)降至(0 .97±0.013) mg/g FW, 可溶性蛋白由40.4 mg/g FW(对照)降至29.3 mg/g FW.Atrazin e可明显影响染色体结构,以0.01 mg/L处理水稻时,有0.68%的细胞中发现染色体凝集,0 .86%的细胞中有微核存在,该现象出现频率随Atrazine处理浓度的提高而增加.用2D-PAG E分析,在0.1 mg/L Atrazine处理后,根尖分生组织中2种新的蛋白质组分诱导产生,8种蛋白质组分消失,1种叶绿体蛋白质组分消失,3种蛋白质组分含量减少.Atrazine引起幼苗生长,叶绿素和可溶性蛋白质含量及根尖分生组织、叶绿体蛋白质组分变化的临界剂量为0 .1 mg/L,引起水稻染色体凝集和微核形成的临界剂量为0.001 mg/L.%In this paper, the comparative studies on the effects of triazine herbicide Atrazine on seedlings growth, contents of chlorophyll and soluble protein, chromosome structure of root meristem, protein compositions of root meristems and chloroplast have been made in Oryza sativa. The seedlings growth was obviously reduced from (10.8±1.7) cm (control) to (8.2± 0.7) cm, chlorophyll contents were decreased from (1.07±0.013) mg/g FW(control) to (0.97±0.013) mg/g FW, and soluble protein contents were decreased from 40.4 mg/g FW (control) to 29.3 mg/g FW when seedlings were treated with 0.1 mg/L Atrazine for 7 days. 0.68% cells with chromosome condensation and 0.86 % cells with micronuclei were revealed in root meristems when the root meristems were treated with 0.01 mg/L Atrazine. The frequency of chromosome condensation and micronuclei formation were increased with the increase of Atrazine concentration from 0.001 mg