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Sample records for arabidopsis irregular xylem8

  1. Moss Pathogenesis-Related-10 protein enhances resistance to Pythium irregulare in Physcomitrella patens and Arabidopsis thaliana

    Directory of Open Access Journals (Sweden)

    Alexandra eCastro

    2016-04-01

    Full Text Available Plants respond to pathogen infection by activating signaling pathways leading to the accumulation of proteins with diverse roles in defense. Here, we addressed the functional role of PpPR-10, a pathogenesis-related (PR-10 gene, of the moss Physcomitrella patens, in response to biotic stress. PpPR-10 belongs to a multigene family and encodes a protein twice the usual size of PR-10 proteins due to the presence of two Bet v1 domains. Moss PR-10 genes are differentially regulated during development and inoculation with the fungal pathogen Botrytis cinerea. Specifically, PpPR-10 transcript levels increase significantly by treatments with elicitors of Pectobacterium carotovorum subsp. carotovorum, spores of B. cinerea, and the defense hormone salicylic acid. To characterize the role of PpPR-10 in plant defense against pathogens, we conducted overexpression analysis in P. patens and in Arabidopsis thaliana. We demonstrate that constitutive expression of PpPR-10 in moss tissues increased resistance against the oomycete Pythium irregulare. PpPR-10 overexpressing moss plants developed less symptoms and decreased mycelium growth than wild type plants. In addition, PpPR-10 overexpressing plants constitutively produced cell wall depositions in protonemal tissue. Ectopic expression of PpPR-10 in Arabidopsis resulted in increased resistance against P. irregulare as well, evidenced by smaller lesions and less cellular damage compared to wild type plants. These results indicate that PpPR-10 is functionally active in the defense against the pathogen P. irregulare, in both P. patens and Arabidopsis, two evolutionary distant plants. Thus, P. patens can serve as an interesting source of genes to improve resistance against pathogen infection in flowering plants.

  2. Loss of Arabidopsis GAUT12/IRX8 causes anther indehiscence and leads to reduced G lignin associated with altered matrix polysaccharide deposition

    Directory of Open Access Journals (Sweden)

    Zhangying eHao

    2014-07-01

    Full Text Available GAUT12 (GAlactUronosylTransferase12/IRX8 (IRregular Xylem8 is a putative glycosyltransferase involved in Arabidopsis secondary cell wall biosynthesis. Previous work showed that Arabidopsis irregular xylem8 (irx8 mutants have collapsed xylem due to a reduction in xylan and a lesser reduction in a subfraction of homogalacturonan (HG. We now show that male sterility in the irx8 mutant is due to indehiscent anthers caused by reduced deposition of xylan and lignin in the endothecium cell layer. The reduced lignin content was demonstrated by histochemical lignin staining and pyrolysis Molecular Beam Mass Spectrometry (pyMBMS and is associated with reduced lignin biosynthesis in irx8 stems. Examination of sequential chemical extracts of stem walls using 2D 13C-1H Heteronuclear Single-Quantum Correlation (HSQC NMR spectroscopy and antibody-based glycome profiling revealed a reduction in G lignin in the 1 M KOH extract and a concomitant loss of xylan, arabinogalactan and pectin epitopes in the ammonium oxalate, sodium carbonate, and 1 M KOH extracts from the irx8 walls compared with wild-type walls. Immunolabeling of stem sections using the monoclonal antibody CCRC-M138 reactive against an unsubstituted xylopentaose epitope revealed a bi-lamellate pattern in wild-type fiber cells and a collapsed bi-layer in irx8 cells, suggesting that at least in fiber cells, GAUT12 participates in the synthesis of a specific layer or type of xylan or helps to provide an architecture framework required for the native xylan deposition pattern. The results support the hypothesis that GAUT12 functions in the synthesis of a structure required for xylan and lignin deposition during secondary cell wall formation.

  3. Irregular Applications: Architectures & Algorithms

    Energy Technology Data Exchange (ETDEWEB)

    Feo, John T.; Villa, Oreste; Tumeo, Antonino; Secchi, Simone

    2012-02-06

    Irregular applications are characterized by irregular data structures, control and communication patterns. Novel irregular high performance applications which deal with large data sets and require have recently appeared. Unfortunately, current high performance systems and software infrastructures executes irregular algorithms poorly. Only coordinated efforts by end user, area specialists and computer scientists that consider both the architecture and the software stack may be able to provide solutions to the challenges of modern irregular applications.

  4. Star Formation in Irregular Galaxies.

    Science.gov (United States)

    Hunter, Deidre; Wolff, Sidney

    1985-01-01

    Examines mechanisms of how stars are formed in irregular galaxies. Formation in giant irregular galaxies, formation in dwarf irregular galaxies, and comparisons with larger star-forming regions found in spiral galaxies are considered separately. (JN)

  5. Saturn's Irregular Moon Ymir

    Science.gov (United States)

    Denk, Tilmann; Mottola, S.

    2012-10-01

    Ymir (diameter 18 km), Saturn's second largest retrograde outer or irregular moon, has been observed six times by the Cassini narrow-angle camera (NAC) during the first 7 months in 2012. The observations span phase angles from 2° up to 102° and were taken at ranges between 15 and 18 million kilometers. From such a distance, Ymir is smaller than a pixel in the Cassini NAC. The data reveal a sidereal rotation period of 11.93 hrs, which is 1.6x longer than the previously reported value (Denk et al. 2011, EPSC/DPS #1452). Reason for this discrepancy is that the rotational light curve shows a rather uncommon 3-maxima and 3-minima shape at least in the phase angle range 50° to 100°, which was not recognizable in earlier data. The data cover several rotations from different viewing and illumination geometries and allow for a convex shape inversion with possibly a unique solution for the pole direction. The model reproduces the observed light curves to a very good accuracy without requiring albedo variegation, thereby suggesting that the lightcurve is dominated by the shape of Ymir. Among Saturn's irregular moons, the phenomenon of more than two maxima and minima at moderate to high phase angles is not unique to Ymir. At least Siarnaq and Paaliaq also show light curves with a strong deviation from a double-sine curve. Their rotation periods, however, remain unknown until more data can be taken. The light curve of Phoebe is fundamentally different to Ymir's because it is mainly shaped by local albedo differences and not by shape. Other reliable rotation periods of irregular satellites measured by Cassini include: Mundilfari 6.74 h; Kari 7.70 h; Albiorix 13.32 h; Kiviuq 21.82 h. More uncertain values are: Skathi 12 h; Bebhionn 16 h; Thrymr 27 h; Erriapus 28 h.

  6. Irregular Migrants and the Law

    OpenAIRE

    Kassim, Azizah; Mat Zin, Ragayah Hj.

    2013-01-01

    This paper examines Malaysia`s policy on irregular migrants and its implementation, and discusses its impact. A survey and interview covering 404 respondents was conducted between July 2010 and June 2011 to ascertain the real situations surrounding irregular migrants in Malaysia, which is one of the major host countries of international migrants from developing nations. The policy on foreign workers was formulated in the mid-1980s to deal with the large number of irregular migrants and their ...

  7. Strategic Analysis of Irregular Warfare

    Science.gov (United States)

    2010-03-01

    the same mathematical equations used by Lanchester .10 Irregular Warfare Theory and Doctrine It is time to develop new analytical methods and models...basis on which to build, similar to what Lanchester provided almost 100 years ago. Figure 9 portrays both Lanchester’s approach and an irregular 17

  8. Irregular Dwarf Galaxy IC 1613

    Science.gov (United States)

    2005-01-01

    Ultraviolet image (left) and visual image (right) of the irregular dwarf galaxy IC 1613. Low surface brightness galaxies, such as IC 1613, are more easily detected in the ultraviolet because of the low background levels compared to visual wavelengths.

  9. GARCH and Irregularly Spaced Data

    NARCIS (Netherlands)

    Meddahi, N.; Renault, E.; Werker, B.J.M.

    2003-01-01

    An exact discretization of continuous time stochastic volatility processes observed at irregularly spaced times is used to give insights on how a coherent GARCH model can be specified for such data. The relation of our approach with those in the existing literature is studied.

  10. Irregular Migration in Jordan, 1995-2007

    OpenAIRE

    AROURI, Fathi A.

    2008-01-01

    Euro-Mediterranean Consortium for Applied Research on International Migration (CARIM) This paper tackles the question of irregular migration in Jordan through its four main aspects. The first concerns irregular labour migrants and has been approached by using figures showing the socio-economic profile of non Jordanians working in Jordan and, additionally, unemployment in Jordan. This is done by assuming close similarities between legal and irregular labour migrants. The second is an attemp...

  11. Ethical issues in irregular migration research

    NARCIS (Netherlands)

    Duvell, F.; Triandafyllidou, A.; Vollmer, B.

    2008-01-01

    This paper is concerned with the ethical issues arising for researchers engaged in the study of irregular migration. Irregular migration is by definition an elusive phenomenon as it takes place in violation of the law and at the margins of society. This very nature of the phenomenon raises important

  12. Capture of irregular satellites at Jupiter

    International Nuclear Information System (INIS)

    Nesvorný, David; Vokrouhlický, David; Deienno, Rogerio

    2014-01-01

    The irregular satellites of outer planets are thought to have been captured from heliocentric orbits. The exact nature of the capture process, however, remains uncertain. We examine the possibility that irregular satellites were captured from the planetesimal disk during the early solar system instability when encounters between the outer planets occurred. Nesvorný et al. already showed that the irregular satellites of Saturn, Uranus, and Neptune were plausibly captured during planetary encounters. Here we find that the current instability models present favorable conditions for capture of irregular satellites at Jupiter as well, mainly because Jupiter undergoes a phase of close encounters with an ice giant. We show that the orbital distribution of bodies captured during planetary encounters provides a good match to the observed distribution of irregular satellites at Jupiter. The capture efficiency for each particle in the original transplanetary disk is found to be (1.3-3.6) × 10 –8 . This is roughly enough to explain the observed population of jovian irregular moons. We also confirm Nesvorný et al.'s results for the irregular satellites of Saturn, Uranus, and Neptune.

  13. Examining U.S. Irregular Warfare Doctrine

    National Research Council Canada - National Science Library

    Kimbrough, IV, James M

    2008-01-01

    ... of insurgency and terrorism. In response to the associated strategic challenges, a growing debate occurred among military historians, strategists, and leaders about the proper principles necessary for contemporary irregular...

  14. Locating irregularly shaped clusters of infection intensity

    Directory of Open Access Journals (Sweden)

    Niko Yiannakoulias

    2010-05-01

    Full Text Available Patterns of disease may take on irregular geographic shapes, especially when features of the physical environment influence risk. Identifying these patterns can be important for planning, and also identifying new environmental or social factors associated with high or low risk of illness. Until recently, cluster detection methods were limited in their ability to detect irregular spatial patterns, and limited to finding clusters that were roughly circular in shape. This approach has less power to detect irregularly-shaped, yet important spatial anomalies, particularly at high spatial resolutions. We employ a new method of finding irregularly-shaped spatial clusters at micro-geographical scales using both simulated and real data on Schistosoma mansoni and hookworm infection intensities. This method, which we refer to as the “greedy growth scan”, is a modification of the spatial scan method for cluster detection. Real data are based on samples of hookworm and S. mansoni from Kitengei, Makueni district, Kenya. Our analysis of simulated data shows how methods able to find irregular shapes are more likely to identify clusters along rivers than methods constrained to fixed geometries. Our analysis of infection intensity identifies two small areas within the study region in which infection intensity is elevated, possibly due to local features of the physical or social environment. Collectively, our results show that the “greedy growth scan” is a suitable method for exploratory geographical analysis of infection intensity data when irregular shapes are suspected, especially at micro-geographical scales.

  15. Detecting chaos in irregularly sampled time series.

    Science.gov (United States)

    Kulp, C W

    2013-09-01

    Recently, Wiebe and Virgin [Chaos 22, 013136 (2012)] developed an algorithm which detects chaos by analyzing a time series' power spectrum which is computed using the Discrete Fourier Transform (DFT). Their algorithm, like other time series characterization algorithms, requires that the time series be regularly sampled. Real-world data, however, are often irregularly sampled, thus, making the detection of chaotic behavior difficult or impossible with those methods. In this paper, a characterization algorithm is presented, which effectively detects chaos in irregularly sampled time series. The work presented here is a modification of Wiebe and Virgin's algorithm and uses the Lomb-Scargle Periodogram (LSP) to compute a series' power spectrum instead of the DFT. The DFT is not appropriate for irregularly sampled time series. However, the LSP is capable of computing the frequency content of irregularly sampled data. Furthermore, a new method of analyzing the power spectrum is developed, which can be useful for differentiating between chaotic and non-chaotic behavior. The new characterization algorithm is successfully applied to irregularly sampled data generated by a model as well as data consisting of observations of variable stars.

  16. Irregular menstruation according to occupational status.

    Science.gov (United States)

    Kwak, Yeunhee; Kim, Yoonjung

    2017-07-06

    This cross-sectional study explored associations of irregular menstruation with occupational characteristics, using secondary analyses of data from 4,731 women aged 19-54 years, collected from a nationally representative sample, the Korea National Health and Nutrition Examination Survey-V during 2010-2012. The associations between irregular menstruation and occupation were explored using multiple logistic regression. Compared to non-manual workers, service/sales workers had a greater odds of irregular menstruation (adjusted odds ratio [aOR]: 1.44; 95percent confidence interval [CI]: 1.04-1.99) as did manual workers and unemployed women (aOR: 1.56; 95percent CI: 1.10-2.22, aOR: 1.46; 95percent CI: 1.14-1.89, respectively). Compared to regular workers, temporary workers and unemployed women had aORs of 1.52 (95percent CI: 1.08-2.13) and 1.33 (95percent CI: 1.05-1.69), respectively. Also, when compared to full-time workers, part-time workers and unemployed women had greater odds of irregular menstruation (aOR: 1.41; 95percent CI: 1.00-2.00 and aOR: 1.29; 95percent CI: 1.03-1.63, respectively). Furthermore, compared to daytime workers, shift workers and unemployed women had greater odds irregular menstruation (aOR: 1.39; 95percent CI: 1.03-1.88 and aOR: 1.28; 95percent CI: 1.04-1.59, respectively). Women with these occupational characteristics should be screened for early diagnosis and intervention for irregular menstruation.

  17. Advances in electron dosimetry of irregular fields

    International Nuclear Information System (INIS)

    Mendez V, J.

    1998-01-01

    In this work it is presented an advance in Electron dosimetry of irregular fields for beams emitted by linear accelerators. At present diverse methods exist which are coming to apply in the Radiotherapy centers. In this work it is proposed a method for irregular fields dosimetry. It will be allow to calculate the dose rate absorbed required for evaluating the time for the treatment of cancer patients. Utilizing the results obtained by the dosimetric system, it has been possible to prove the validity of the method describe for 12 MeV energy and for square field 7.5 x 7.5 cm 2 with percentile error less than 1 % . (Author)

  18. New Model for Ionospheric Irregularities at Mars

    Science.gov (United States)

    Keskinen, M. J.

    2018-03-01

    A new model for ionospheric irregularities at Mars is presented. It is shown that wind-driven currents in the dynamo region of the Martian ionosphere can be unstable to the electromagnetic gradient drift instability. This plasma instability can generate ionospheric density and magnetic field irregularities with scale sizes of approximately 15-20 km down to a few kilometers. We show that the instability-driven magnetic field fluctuation amplitudes relative to background are correlated with the ionospheric density fluctuation amplitudes relative to background. Our results can explain recent observations made by the Mars Atmosphere and Volatile EvolutioN spacecraft in the Martian ionosphere dynamo region.

  19. High energy model for irregular absorbing particles

    International Nuclear Information System (INIS)

    Chiappetta, Pierre.

    1979-05-01

    In the framework of a high energy formulation of relativistic quantum scattering a model is presented which describes the scattering functions and polarization of irregular absorbing particles, whose dimensions are greater than the incident wavelength. More precisely in the forward direction an amplitude parametrization of eikonal type is defined which generalizes the usual diffraction theory, and in the backward direction a reflective model is used including a shadow function. The model predictions are in good agreement with the scattering measurements off irregular compact and fluffy particles performed by Zerull, Giese and Weiss (1977)

  20. Synchronizing data from irregularly sampled sensors

    Science.gov (United States)

    Uluyol, Onder

    2017-07-11

    A system and method include receiving a set of sampled measurements for each of multiple sensors, wherein the sampled measurements are at irregular intervals or different rates, re-sampling the sampled measurements of each of the multiple sensors at a higher rate than one of the sensor's set of sampled measurements, and synchronizing the sampled measurements of each of the multiple sensors.

  1. Natural convection inside an irregular porous cavity

    International Nuclear Information System (INIS)

    Beltran, Jorge I. LLagostera; Trevisan, Osvair Vidal

    1990-01-01

    Natural convection flow induced by heating from below in a irregular porous cavity is investigated numerically. The influence of the modified Rayleigh number and geometric ratios on heat transfer and fluid flow is studied. Global and local Nusselt for Rayleigh numbers covering the range 0 - 1600 and for several geometric ratios. The fluid flow and the temperature field are illustrated by contour maps. (author)

  2. Arabidopsis thaliana peroxidase N

    DEFF Research Database (Denmark)

    Mirza, Osman Asghar; Henriksen, A; Ostergaard, L

    2000-01-01

    The structure of the neutral peroxidase from Arabidopsis thaliana (ATP N) has been determined to a resolution of 1.9 A and a free R value of 20.5%. ATP N has the expected characteristic fold of the class III peroxidases, with a C(alpha) r.m.s.d. of 0.82 A when compared with horseradish peroxidase C...

  3. Fitting Irregular Shape Figures into Irregular Shape Areas for the Nesting Problem in the Leather Industry

    Directory of Open Access Journals (Sweden)

    Guevara-Palma Luis

    2015-01-01

    Full Text Available The nesting problem of irregular shapes within irregular areas has been studied from several approaches due to their application in different industries. The particular case of cutting leather involves several restrictions that add complexity to this problem, it is necessary to generate products that comply with the quality required by customers This paper presents a methodology for the accommodation of irregular shapes in an irregular area (leather considering the constraints set by the footwear industry, and the results of this methodology when applied by a computer system. The scope of the system is to develop a working prototype that operates under the guidelines of a commercial production line of a sponsor company. Preliminary results got a reduction of 70% of processing time and improvement of 5% to 7% of the area usage when compared with manual accommodation.

  4. Generating Performance Models for Irregular Applications

    Energy Technology Data Exchange (ETDEWEB)

    Friese, Ryan D.; Tallent, Nathan R.; Vishnu, Abhinav; Kerbyson, Darren J.; Hoisie, Adolfy

    2017-05-30

    Many applications have irregular behavior --- non-uniform input data, input-dependent solvers, irregular memory accesses, unbiased branches --- that cannot be captured using today's automated performance modeling techniques. We describe new hierarchical critical path analyses for the \\Palm model generation tool. To create a model's structure, we capture tasks along representative MPI critical paths. We create a histogram of critical tasks with parameterized task arguments and instance counts. To model each task, we identify hot instruction-level sub-paths and model each sub-path based on data flow, instruction scheduling, and data locality. We describe application models that generate accurate predictions for strong scaling when varying CPU speed, cache speed, memory speed, and architecture. We present results for the Sweep3D neutron transport benchmark; Page Rank on multiple graphs; Support Vector Machine with pruning; and PFLOTRAN's reactive flow/transport solver with domain-induced load imbalance.

  5. Long wavelength irregularities in the equatorial electrojet

    OpenAIRE

    Kudeki, E.; Farley, D. T.; Fejer, Bela G.

    1982-01-01

    We have used the radar interferometer technique at Jicamarca to study in detail irregularities with wavelengths of a few kilometers generated in the unstable equatorial electrojet plasma during strong type 1 conditions. In-situ rocket observations of the same instability process are discussed in a companion paper. These large scale primary waves travel essentially horizontally and have large amplitudes. The vertical electron drift velocities driven by the horizontal wave electric fields reach...

  6. Improving Transactional Memory Performance for Irregular Applications

    OpenAIRE

    Pedrero, Manuel; Gutiérrez, Eladio; Romero, Sergio; Plata, Óscar

    2015-01-01

    Transactional memory (TM) offers optimistic concurrency support in modern multicore archi- tectures, helping the programmers to extract parallelism in irregular applications when data dependence information is not available before runtime. In fact, recent research focus on ex- ploiting thread-level parallelism using TM approaches. However, the proposed techniques are of general use, valid for any type of application. This work presents ReduxSTM, a software TM system specially d...

  7. Star formation histories of irregular galaxies

    International Nuclear Information System (INIS)

    Gallagher, J.S. III; Hunter, D.A.; Tutukov, A.V.

    1984-01-01

    We explore the star formation histories of a selection of irregular and spiral galaxies by using three parameters that sample the star formation rate (SFR) at different epochs: (1) the mass of a galaxy in the form of stars measures the SFR integrated over a galaxy's lifetime; (2) the blue luminosity is dominated primarily by stars formed over the past few billion years; and (3) Lyman continuum photon fluxes derived from Hα luminosities give the current ( 8 yr) SFR

  8. Parallel Computing Strategies for Irregular Algorithms

    Science.gov (United States)

    Biswas, Rupak; Oliker, Leonid; Shan, Hongzhang; Biegel, Bryan (Technical Monitor)

    2002-01-01

    Parallel computing promises several orders of magnitude increase in our ability to solve realistic computationally-intensive problems, but relies on their efficient mapping and execution on large-scale multiprocessor architectures. Unfortunately, many important applications are irregular and dynamic in nature, making their effective parallel implementation a daunting task. Moreover, with the proliferation of parallel architectures and programming paradigms, the typical scientist is faced with a plethora of questions that must be answered in order to obtain an acceptable parallel implementation of the solution algorithm. In this paper, we consider three representative irregular applications: unstructured remeshing, sparse matrix computations, and N-body problems, and parallelize them using various popular programming paradigms on a wide spectrum of computer platforms ranging from state-of-the-art supercomputers to PC clusters. We present the underlying problems, the solution algorithms, and the parallel implementation strategies. Smart load-balancing, partitioning, and ordering techniques are used to enhance parallel performance. Overall results demonstrate the complexity of efficiently parallelizing irregular algorithms.

  9. The Impact of Irregular Warfare on the US Army

    National Research Council Canada - National Science Library

    McDonald, III, Roger L

    2006-01-01

    Although the U.S. Army has yet to clearly define irregular warfare, it is imperative that the Army take near-term action to enhance the ability of Soldiers and units to operate effectively in an irregular warfare environment...

  10. State reconstruction and irregular wavefunctions for the hydrogen atom

    Science.gov (United States)

    Krähmer, D. S.; Leonhardt, U.

    1997-07-01

    Inspired by a recently proposed procedure by Leonhardt and Raymer for wavepacket reconstruction, we calculate the irregular wavefunctions for the bound states of the Coulomb potential. We select the irregular solutions which have the simplest semiclassical limit.

  11. On irregularity strength of disjoint union of friendship graphs

    Directory of Open Access Journals (Sweden)

    Ali Ahmad

    2013-11-01

    Full Text Available We investigate the vertex total and edge total modication of the well-known irregularity strength of graphs. We have determined the exact values of the total vertex irregularity strength and the total edge irregularity strength of a disjoint union of friendship graphs.

  12. 16 CFR 501.6 - Cellulose sponges, irregular dimensions.

    Science.gov (United States)

    2010-01-01

    ... 16 Commercial Practices 1 2010-01-01 2010-01-01 false Cellulose sponges, irregular dimensions. 501... REQUIREMENTS AND PROHIBITIONS UNDER PART 500 § 501.6 Cellulose sponges, irregular dimensions. Variety packages of cellulose sponges of irregular dimensions, are exempted from the requirements of § 500.25 of this...

  13. Locating irregularly shaped clusters of infection intensity

    DEFF Research Database (Denmark)

    Yiannakoulias, Niko; Wilson, Shona; Kariuki, H. Curtis

    2010-01-01

    of infection intensity identifies two small areas within the study region in which infection intensity is elevated, possibly due to local features of the physical or social environment. Collectively, our results show that the "greedy growth scan" is a suitable method for exploratory geographical analysis...... for cluster detection. Real data are based on samples of hookworm and S. mansoni from Kitengei, Makueni district, Kenya. Our analysis of simulated data shows how methods able to find irregular shapes are more likely to identify clusters along rivers than methods constrained to fixed geometries. Our analysis...

  14. Equatorial Ionospheric Irregularities Study from ROCSAT Data

    Science.gov (United States)

    2017-10-20

    UNLIMITED: PB Public Release 13. SUPPLEMENTARY NOTES 14. ABSTRACT Ionospheric irregularity/scintillation occurrences can be caused by external driving ...Academia Sinica, Taipei, Taiwan e-mail: chliu2@gate.sinica.edu.tw phone :886-3-4227151x34757 CoPI: Shin-Yi Su Institution: National Central...University, Chung-Li, Taiwan e-mail: sysu@csrsr.ncu.edu.tw phone :886-3-4227151x57643 CoPI: Lung-Chi Tsai Institution: National Central University, Chung-Li

  15. Artificial periodic irregularities in the auroral ionosphere

    Directory of Open Access Journals (Sweden)

    M. T. Rietveld

    1996-12-01

    Full Text Available Artificial periodic irregularities (API are produced in the ionospheric plasma by a powerful standing electromagnetic wave reflected off the F region. The resulting electron-density irregularities can scatter other high-frequency waves if the Bragg scattering condition is met. Such measurements have been performed at mid-latitudes for two decades and have been developed into a useful ionospheric diagnostic technique. We report here the first measurements from a high-latitude station, using the EISCAT heating facility near Tromsø, Norway. Both F-region and lower-altitude ionospheric echoes have been obtained, but the bulk of the data has been in the E and D regions with echoes extending down to 52-km altitude. Examples of API are shown, mainly from the D region, together with simultaneous VHF incoherent-scatter-radar (ISR data. Vertical velocities derived from the rate of phase change during the irregularity decay are shown and compared with velocities derived from the ISR. Some of the API-derived velocities in the 75–115-km height range appear consistent with vertical neutral winds as shown by their magnitudes and by evidence of gravity waves, while other data in the 50–70-km range show an unrealistically large bias. For a comparison with ISR data it has proved difficult to get good quality data sets overlapping in height and time. The initial comparisons show some agreement, but discrepancies of several metres per second do not yet allow us to conclude that the two techniques are measuring the same quantity. The irregularity decay time-constants between about 53 and 70 km are compared with the results of an advanced ion-chemistry model, and height profiles of recorded signal power are compared with model estimates in the same altitude range. The calculated amplitude shows good agreement with the data in that the maximum occurs at about the same height as that of the measured amplitude. The calculated time-constant agrees very well with the

  16. Legal aspects of the EU policy on irregular immigration

    Directory of Open Access Journals (Sweden)

    Voinikov Vadim

    2015-12-01

    Full Text Available This article addresses the issues pertaining to the adoption and development of legislation on irregular migration in the context of uncontrolled growth in the number of immigrants from North Africa and the Middle East to the EU. The article attempts at studying the EU legislation on irregular migration, classifying it, and analysing the prospects of EU migration legislation in the light of an increase in irregular immigration into the EU. The author systematises, classifies the current EU legislation on irregular immigration, and analyses the conditions, in which this legislation was developed. Using the legislation analysis method, the author proposes the following system of EU legislation on irregular immigration: rules preventing assistance to irregular immigration, rules preventing employment of irregular immigrants, rules on the return of irregular migrants and readmission, rules on border control, and rules on collaboration with third countries. The author pays special attention to analysing the current state of irregular immigration to the EU, which was dubbed the ‘greatest migration crisis in Europe’. The conclusion is that the European Union succeeded in the development of pioneering legislation on irregular immigration, which can serve as the basis for reception by other states. However, changes in the political and economic situation in the EU’s southern borderlands made the current legal mechanisms incapable of withstanding new threats. It necessitates a radical reform of the legislation on irregular immigration.

  17. An Arabidopsis callose synthase

    DEFF Research Database (Denmark)

    Ostergaard, Lars; Petersen, Morten; Mattsson, Ole

    2002-01-01

    in the Arabidopsis mpk4 mutant which exhibits systemic acquired resistance (SAR), elevated beta-1,3-glucan synthase activity, and increased callose levels. In addition, AtGsl5 is a likely target of salicylic acid (SA)-dependent SAR, since AtGsl5 mRNA accumulation is induced by SA in wild-type plants, while...... expression of the nahG salicylate hydroxylase reduces AtGsl5 mRNA levels in the mpk4 mutant. These results indicate that AtGsl5 is likely involved in callose synthesis in flowering tissues and in the mpk4 mutant....

  18. Computing proton dose to irregularly moving targets

    International Nuclear Information System (INIS)

    Phillips, Justin; Gueorguiev, Gueorgui; Grassberger, Clemens; Dowdell, Stephen; Paganetti, Harald; Sharp, Gregory C; Shackleford, James A

    2014-01-01

    Purpose: While four-dimensional computed tomography (4DCT) and deformable registration can be used to assess the dose delivered to regularly moving targets, there are few methods available for irregularly moving targets. 4DCT captures an idealized waveform, but human respiration during treatment is characterized by gradual baseline shifts and other deviations from a periodic signal. This paper describes a method for computing the dose delivered to irregularly moving targets based on 1D or 3D waveforms captured at the time of delivery. Methods: The procedure uses CT or 4DCT images for dose calculation, and 1D or 3D respiratory waveforms of the target position at time of delivery. Dose volumes are converted from their Cartesian geometry into a beam-specific radiological depth space, parameterized in 2D by the beam aperture, and longitudinally by the radiological depth. In this new frame of reference, the proton doses are translated according to the motion found in the 1D or 3D trajectory. These translated dose volumes are weighted and summed, then transformed back into Cartesian space, yielding an estimate of the dose that includes the effect of the measured breathing motion. The method was validated using a synthetic lung phantom and a single representative patient CT. Simulated 4DCT was generated for the phantom with 2 cm peak-to-peak motion. Results: A passively-scattered proton treatment plan was generated using 6 mm and 5 mm smearing for the phantom and patient plans, respectively. The method was tested without motion, and with two simulated breathing signals: a 2 cm amplitude sinusoid, and a 2 cm amplitude sinusoid with 3 cm linear drift in the phantom. The tumor positions were equally weighted for the patient calculation. Motion-corrected dose was computed based on the mid-ventilation CT image in the phantom and the peak exhale position in the patient. Gamma evaluation was 97.8% without motion, 95.7% for 2 cm sinusoidal motion, 95.7% with 3 cm drift in

  19. Photorepair mutants of Arabidopsis

    International Nuclear Information System (INIS)

    Jiang, C.Z.; Yee, J.; Mitchell, D.L.; Britt, A.B.

    1997-01-01

    UV radiation induces two major DNA damage products, the cyclobutane pyrimidine dimer (CPD) and, at a lower frequency, the pyrimidine (6-4) pyrimidinone dimer (6-4 product). Although Escherichia coli and Saccharomyces cerevisiae produce a CPD-specific photolyase that eliminates only this class of dimer, Arabidopsis thaliana, Drosophila melanogaster, Crotalus atrox, and Xenopus laevis have recently been shown to photoreactivate both CPDs and 6-4 products. We describe the isolation and characterization of two new classes of mutants of Arabidopsis, termed uvr2 and uvr3, that are defective in the photoreactivation of CPDs and 6-4 products, respectively. We demonstrate that the CPD photolyase mutation is genetically linked to a DNA sequence encoding a type II (metazoan) CPD photolyase. In addition, we are able to generate plants in which only CPDs or 6-4 products are photoreactivated in the nuclear genome by exposing these mutants to UV light and then allowing them to repair one or the other class of dimers. This provides us with a unique opportunity to study the biological consequences of each of these two major UV-induced photoproducts in an intact living system

  20. Arabidopsis peroxisome proteomics

    Directory of Open Access Journals (Sweden)

    John D. Bussell

    2013-04-01

    Full Text Available The analytical depth of investigation of the peroxisomal proteome of the model plant Arabidopsis thaliana has not yet reached that of other major cellular organelles such as chloroplasts or mitochondria. This is primarily due to the difficulties associated with isolating and obtaining purified samples of peroxisomes from Arabidopsis. So far only a handful of research groups have been successful in obtaining such fractions. To make things worse, enriched peroxisome fractions frequently suffer from significant organellar contamination, lowering confidence in localization assignment of the identified proteins. As with other cellular compartments, identification of peroxisomal proteins forms the basis for investigations of the dynamics of the peroxisomal proteome. It is therefore not surprising that, in terms of functional analyses by proteomic means, there remains a considerable gap between peroxisomes and chloroplasts or mitochondria. Alternative strategies are needed to overcome the obstacle of hard-to-obtain organellar fractions. This will help to close the knowledge gap between peroxisomes and other organelles and provide a full picture of the physiological pathways shared between organelles. In this review we briefly summarize the status quo and discuss some of the methodological alternatives to classic organelle proteomic approaches.

  1. Long wavelength irregularities in the equatorial electrojet

    International Nuclear Information System (INIS)

    Kudeki, E.; Farley, D.T.; Fejer, B.G.

    1982-01-01

    We have used the radar interferometer technique at Jicamarca to study in detail irregularities with wavelengths of a few kilometers generated in the unstable equatorial electrojet plasma during strong type 1 conditions. In-situ rocket observations of the same instability process are discussed in a companion paper. These large scale primary waves travel essentially horizontally and have large amplitudes. The vertical electron drift velocities driven by the horizontal wave electric fields reach or exceed the ion-acoustic velocity even though the horizontal phase velocity of the wave is considerably smaller. A straightforward extension to the long wavelength regime of the usual linear theory of the electrojet instability explains this and several other observed features of these dominant primary waves

  2. Irregular employment amongst migrants in Spanish cities.

    Science.gov (United States)

    Sole, C; Ribas, N; Bergalli, V; Parella, S

    1998-04-01

    This article presents the irregular employment situation of non-European union immigrants in Spanish cities. Foreign labor is remarkable for its heterogeneity in terms of country of origin, demographic characteristics, and the different ways in which immigrants have entered the job market. Legal immigrants tend to concentrate in five different branches of activity, such as domestic service (mostly women), hotel and restaurant industry, agriculture, building and retail trade. Migrants who work in agriculture suffer the worst labor conditions than all other migrants. However, all migrants experience difficulty in obtaining residency and labor permits. Four integration strategies among Moroccan immigrants in Catalonia are discussed and can be viewed as support networks of the immigrants.

  3. Irregular activity arises as a natural consequence of synaptic inhibition

    International Nuclear Information System (INIS)

    Terman, D.; Rubin, J. E.; Diekman, C. O.

    2013-01-01

    Irregular neuronal activity is observed in a variety of brain regions and states. This work illustrates a novel mechanism by which irregular activity naturally emerges in two-cell neuronal networks featuring coupling by synaptic inhibition. We introduce a one-dimensional map that captures the irregular activity occurring in our simulations of conductance-based differential equations and mathematically analyze the instability of fixed points corresponding to synchronous and antiphase spiking for this map. We find that the irregular solutions that arise exhibit expansion, contraction, and folding in phase space, as expected in chaotic dynamics. Our analysis shows that these features are produced from the interplay of synaptic inhibition with sodium, potassium, and leak currents in a conductance-based framework and provides precise conditions on parameters that ensure that irregular activity will occur. In particular, the temporal details of spiking dynamics must be present for a model to exhibit this irregularity mechanism and must be considered analytically to capture these effects

  4. Irregular activity arises as a natural consequence of synaptic inhibition

    Energy Technology Data Exchange (ETDEWEB)

    Terman, D., E-mail: terman@math.ohio-state.edu [Department of Mathematics, The Ohio State University, Columbus, Ohio 43210 (United States); Rubin, J. E., E-mail: jonrubin@pitt.edu [Department of Mathematics, University of Pittsburgh, Pittsburgh, Pennsylvania 15260 (United States); Diekman, C. O., E-mail: diekman@njit.edu [Department of Mathematical Sciences, New Jersey Institute of Technology, Newark, New Jersey 07102 (United States)

    2013-12-15

    Irregular neuronal activity is observed in a variety of brain regions and states. This work illustrates a novel mechanism by which irregular activity naturally emerges in two-cell neuronal networks featuring coupling by synaptic inhibition. We introduce a one-dimensional map that captures the irregular activity occurring in our simulations of conductance-based differential equations and mathematically analyze the instability of fixed points corresponding to synchronous and antiphase spiking for this map. We find that the irregular solutions that arise exhibit expansion, contraction, and folding in phase space, as expected in chaotic dynamics. Our analysis shows that these features are produced from the interplay of synaptic inhibition with sodium, potassium, and leak currents in a conductance-based framework and provides precise conditions on parameters that ensure that irregular activity will occur. In particular, the temporal details of spiking dynamics must be present for a model to exhibit this irregularity mechanism and must be considered analytically to capture these effects.

  5. Decomposing Oriented Graphs into Six Locally Irregular Oriented Graphs

    DEFF Research Database (Denmark)

    Bensmail, Julien; Renault, Gabriel

    2016-01-01

    An undirected graph G is locally irregular if every two of its adjacent vertices have distinct degrees. We say that G is decomposable into k locally irregular graphs if there exists a partition E1∪E2∪⋯∪Ek of the edge set E(G) such that each Ei induces a locally irregular graph. It was recently co...

  6. Transgenic Arabidopsis Gene Expression System

    Science.gov (United States)

    Ferl, Robert; Paul, Anna-Lisa

    2009-01-01

    The Transgenic Arabidopsis Gene Expression System (TAGES) investigation is one in a pair of investigations that use the Advanced Biological Research System (ABRS) facility. TAGES uses Arabidopsis thaliana, thale cress, with sensor promoter-reporter gene constructs that render the plants as biomonitors (an organism used to determine the quality of the surrounding environment) of their environment using real-time nondestructive Green Fluorescent Protein (GFP) imagery and traditional postflight analyses.

  7. The genome of Arabidopsis thaliana.

    OpenAIRE

    Goodman, H M; Ecker, J R; Dean, C

    1995-01-01

    Arabidopsis thaliana is a small flowering plant that is a member of the family cruciferae. It has many characteristics--diploid genetics, rapid growth cycle, relatively low repetitive DNA content, and small genome size--that recommend it as the model for a plant genome project. The current status of the genetic and physical maps, as well as efforts to sequence the genome, are presented. Examples are given of genes isolated by using map-based cloning. The importance of the Arabidopsis project ...

  8. Characteristics of ionospheric irregularities causing scintillations at VHF/UHF

    International Nuclear Information System (INIS)

    Vats, H.O.; Deshpande, M.R.; Rastogi, R.G.

    1978-01-01

    Some properties of ionization irregularities using amplitude scintillation records of radio beacons from ATS-6 (phase II) at Ootacamund, India have been investigated. For the estimation of scale-size and strength of the irregularities a simple diffraction model has been used which explains only weak and moderate equatorial scintillation observations. It was found that the scale sizes of day time E-region irregularities are smaller than those in the F-region during night time in addition, irregularities are generated initially at large scale sizes which later break up into smaller scale sizes

  9. Efficient Plastid Transformation in Arabidopsis.

    Science.gov (United States)

    Yu, Qiguo; Lutz, Kerry Ann; Maliga, Pal

    2017-09-01

    Plastid transformation is routine in tobacco ( Nicotiana tabacum ) but 100-fold less frequent in Arabidopsis ( Arabidopsis thaliana ), preventing its use in plastid biology. A recent study revealed that null mutations in ACC2 , encoding a plastid-targeted acetyl-coenzyme A carboxylase, cause hypersensitivity to spectinomycin. We hypothesized that plastid transformation efficiency should increase in the acc2 background, because when ACC2 is absent, fatty acid biosynthesis becomes dependent on translation of the plastid-encoded ACC β-carboxylase subunit. We bombarded ACC2 -defective Arabidopsis leaves with a vector carrying a selectable spectinomycin resistance ( aadA ) gene and gfp , encoding the green fluorescence protein GFP. Spectinomycin-resistant clones were identified as green cell clusters on a spectinomycin medium. Plastid transformation was confirmed by GFP accumulation from the second open reading frame of a polycistronic messenger RNA, which would not be translated in the cytoplasm. We obtained one to two plastid transformation events per bombarded sample in spectinomycin-hypersensitive Slavice and Columbia acc2 knockout backgrounds, an approximately 100-fold enhanced plastid transformation frequency. Slavice and Columbia are accessions in which plant regeneration is uncharacterized or difficult to obtain. A practical system for Arabidopsis plastid transformation will be obtained by creating an ACC2 null background in a regenerable Arabidopsis accession. The recognition that the duplicated ACCase in Arabidopsis is an impediment to plastid transformation provides a rational template to implement plastid transformation in related recalcitrant crops. © 2017 American Society of Plant Biologists. All Rights Reserved.

  10. Advances in electron dosimetry of irregular fields; Avances en dosimetria de electrones de campos irregulares

    Energy Technology Data Exchange (ETDEWEB)

    Mendez V, J. [Departamento de Radioterapia, Instituto de Enfermedades Neoplasicas, Avenida Angamos Este 2520, Lima 34 (Peru)

    1998-12-31

    In this work it is presented an advance in Electron dosimetry of irregular fields for beams emitted by linear accelerators. At present diverse methods exist which are coming to apply in the Radiotherapy centers. In this work it is proposed a method for irregular fields dosimetry. It will be allow to calculate the dose rate absorbed required for evaluating the time for the treatment of cancer patients. Utilizing the results obtained by the dosimetric system, it has been possible to prove the validity of the method describe for 12 MeV energy and for square field 7.5 x 7.5 cm{sup 2} with percentile error less than 1 % . (Author)

  11. Reference: 783 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available xpression of the Arabidopsis 10-kilodalton acyl-coenzyme A-binding protein ACBP6 en...phospholipid metabolism in Arabidopsis, including the possibility of ACBP6 in the cytosolic trafficking of phosphatidylcholine. Overe

  12. Reference: 774 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available an essential gene, the disruption of which causes embryonic lethality. Plants carrying a hypomorphic smg7 mu...e progression from anaphase to telophase in the second meiotic division in Arabidopsis. Arabidopsis SMG7 is

  13. Irregular radiation response of a chondrosarcoma

    International Nuclear Information System (INIS)

    Marsden, J.J.; Kember, N.F.; Shaw, J.E.H.

    1980-01-01

    The DC II mouse chondrosarcoma was shown to be a potentially valuable radiobiological tumour system since it recovered from radiation injury by regrowth from clones that could be counted in histological sections. Unfortunately, the normal growth of this tumour following s.c. implantation in the thigh was irregular both in the time before growth became evident and in the rate of growth. The response to radiation was also unreliable since tumours irradiated with the same dose (e.g. 30 Gy) showed a range of responses from shrinkage to no detectable change in growth rate. The delay in normal growth can be attributed largely to delays in vascularization while changes in growth rate may be explained by differences in tumour architecture. Radiation response may depend on variations in hypoxic fraction and in relative cellularity. Tumours having the same external dimensions may differ by a factor of 80 in the numbers of tumour cells they contain. This chondrosarcoma may prove a closer model to some human tumours than many transplantable tumours that display regular growth patterns. (author)

  14. Regularities and irregularities in order flow data

    Science.gov (United States)

    Theissen, Martin; Krause, Sebastian M.; Guhr, Thomas

    2017-11-01

    We identify and analyze statistical regularities and irregularities in the recent order flow of different NASDAQ stocks, focusing on the positions where orders are placed in the order book. This includes limit orders being placed outside of the spread, inside the spread and (effective) market orders. Based on the pairwise comparison of the order flow of different stocks, we perform a clustering of stocks into groups with similar behavior. This is useful to assess systemic aspects of stock price dynamics. We find that limit order placement inside the spread is strongly determined by the dynamics of the spread size. Most orders, however, arrive outside of the spread. While for some stocks order placement on or next to the quotes is dominating, deeper price levels are more important for other stocks. As market orders are usually adjusted to the quote volume, the impact of market orders depends on the order book structure, which we find to be quite diverse among the analyzed stocks as a result of the way limit order placement takes place.

  15. Evaporation From Soil Containers With Irregular Shapes

    Science.gov (United States)

    Assouline, Shmuel; Narkis, Kfir

    2017-11-01

    Evaporation from bare soils under laboratory conditions is generally studied using containers of regular shapes where the vertical edges are parallel to the flow lines in the drying domain. The main objective of this study was to investigate the impact of irregular container shapes, for which the flow lines either converge or diverge toward the surface. Evaporation from initially saturated sand and sandy loam soils packed in cones and inverted cones was compared to evaporation from corresponding cylindrical columns. The initial evaporation rate was higher in the cones, and close to potential evaporation. At the end of the experiment, the cumulative evaporation depth in the sand cone was equal to that in the column but higher than in the inverted cone, while in the sandy loam, the order was cone > column > inverted cone. By comparison to the column, stage 1 evaporation was longer in the cones, and practically similar in the inverted cones. Stage 2 evaporation rate decreased with the increase of the evaporating surface area. These results were more pronounced in the sandy loam. For the sand column, the transition between stage 1 and stage 2 evaporation occurred when the depth of the saturation front was approximately equal to the characteristic length of the soil. However, for the cone and the inverted cone, it occurred for a shallower depth of the saturation front. It seems therefore that the concept of the characteristic length derived from the soil hydraulic properties is related to drying systems of regular shapes.

  16. Design strategies for irregularly adapting parallel applications

    International Nuclear Information System (INIS)

    Oliker, Leonid; Biswas, Rupak; Shan, Hongzhang; Sing, Jaswinder Pal

    2000-01-01

    Achieving scalable performance for dynamic irregular applications is eminently challenging. Traditional message-passing approaches have been making steady progress towards this goal; however, they suffer from complex implementation requirements. The use of a global address space greatly simplifies the programming task, but can degrade the performance of dynamically adapting computations. In this work, we examine two major classes of adaptive applications, under five competing programming methodologies and four leading parallel architectures. Results indicate that it is possible to achieve message-passing performance using shared-memory programming techniques by carefully following the same high level strategies. Adaptive applications have computational work loads and communication patterns which change unpredictably at runtime, requiring dynamic load balancing to achieve scalable performance on parallel machines. Efficient parallel implementations of such adaptive applications are therefore a challenging task. This work examines the implementation of two typical adaptive applications, Dynamic Remeshing and N-Body, across various programming paradigms and architectural platforms. We compare several critical factors of the parallel code development, including performance, programmability, scalability, algorithmic development, and portability

  17. Multiresolution Analysis Adapted to Irregularly Spaced Data

    Directory of Open Access Journals (Sweden)

    Anissa Mokraoui

    2009-01-01

    Full Text Available This paper investigates the mathematical background of multiresolution analysis in the specific context where the signal is represented by irregularly sampled data at known locations. The study is related to the construction of nested piecewise polynomial multiresolution spaces represented by their corresponding orthonormal bases. Using simple spline basis orthonormalization procedures involves the construction of a large family of orthonormal spline scaling bases defined on consecutive bounded intervals. However, if no more additional conditions than those coming from multiresolution are imposed on each bounded interval, the orthonormal basis is represented by a set of discontinuous scaling functions. The spline wavelet basis also has the same problem. Moreover, the dimension of the corresponding wavelet basis increases with the spline degree. An appropriate orthonormalization procedure of the basic spline space basis, whatever the degree of the spline, allows us to (i provide continuous scaling and wavelet functions, (ii reduce the number of wavelets to only one, and (iii reduce the complexity of the filter bank. Examples of the multiresolution implementations illustrate that the main important features of the traditional multiresolution are also satisfied.

  18. Resolution optimization with irregularly sampled Fourier data

    International Nuclear Information System (INIS)

    Ferrara, Matthew; Parker, Jason T; Cheney, Margaret

    2013-01-01

    Image acquisition systems such as synthetic aperture radar (SAR) and magnetic resonance imaging often measure irregularly spaced Fourier samples of the desired image. In this paper we show the relationship between sample locations, their associated backprojection weights, and image resolution as characterized by the resulting point spread function (PSF). Two new methods for computing data weights, based on different optimization criteria, are proposed. The first method, which solves a maximal-eigenvector problem, optimizes a PSF-derived resolution metric which is shown to be equivalent to the volume of the Cramer–Rao (positional) error ellipsoid in the uniform-weight case. The second approach utilizes as its performance metric the Frobenius error between the PSF operator and the ideal delta function, and is an extension of a previously reported algorithm. Our proposed extension appropriately regularizes the weight estimates in the presence of noisy data and eliminates the superfluous issue of image discretization in the choice of data weights. The Frobenius-error approach results in a Tikhonov-regularized inverse problem whose Tikhonov weights are dependent on the locations of the Fourier data as well as the noise variance. The two new methods are compared against several state-of-the-art weighting strategies for synthetic multistatic point-scatterer data, as well as an ‘interrupted SAR’ dataset representative of in-band interference commonly encountered in very high frequency radar applications. (paper)

  19. Irregular Homogeneity Domains in Ternary Intermetallic Systems

    Directory of Open Access Journals (Sweden)

    Jean-Marc Joubert

    2015-12-01

    Full Text Available Ternary intermetallic A–B–C systems sometimes have unexpected behaviors. The present paper examines situations in which there is a tendency to simultaneously form the compounds ABx, ACx and BCx with the same crystal structure. This causes irregular shapes of the phase homogeneity domains and, from a structural point of view, a complete reversal of site occupancies for the B atom when crossing the homogeneity domain. This work reviews previous studies done in the systems Fe–Nb–Zr, Hf–Mo–Re, Hf–Re–W, Mo–Re–Zr, Re–W–Zr, Cr–Mn–Si, Cr–Mo–Re, and Mo–Ni–Re, and involving the topologically close-packed Laves, χ and σ phases. These systems have been studied using ternary isothermal section determination, DFT calculations, site occupancy measurement using joint X-ray, and neutron diffraction Rietveld refinement. Conclusions are drawn concerning this phenomenon. The paper also reports new experimental or calculated data on Co–Cr–Re and Fe–Nb–Zr systems.

  20. 14 CFR 135.65 - Reporting mechanical irregularities.

    Science.gov (United States)

    2010-01-01

    ... irregularities and their correction. (b) The pilot in command shall enter or have entered in the aircraft maintenance log each mechanical irregularity that comes to the pilot's attention during flight time. Before each flight, the pilot in command shall, if the pilot does not already know, determine the status of...

  1. Uniform irradiation of irregularly shaped cavities for photodynamic therapy

    NARCIS (Netherlands)

    Rem, A. I.; van Gemert, M. J.; van der Meulen, F. W.; Gijsbers, G. H.; Beek, J. F.

    1997-01-01

    It is difficult to achieve a uniform light distribution in irregularly shaped cavities. We have conducted a study on the use of hollow 'integrating' moulds for more uniform light delivery of photodynamic therapy in irregularly shaped cavities such as the oral cavity. Simple geometries such as a

  2. Software support for irregular and loosely synchronous problems

    Science.gov (United States)

    Choudhary, A.; Fox, G.; Hiranandani, S.; Kennedy, K.; Koelbel, C.; Ranka, S.; Saltz, J.

    1992-01-01

    A large class of scientific and engineering applications may be classified as irregular and loosely synchronous from the perspective of parallel processing. We present a partial classification of such problems. This classification has motivated us to enhance FORTRAN D to provide language support for irregular, loosely synchronous problems. We present techniques for parallelization of such problems in the context of FORTRAN D.

  3. Regularisation of irregular verbs in child English second language ...

    African Journals Online (AJOL)

    Data was collected from the language of English medium preschool children. The study concludes that when the Blocking Principle interferes, children resort to a novel interlanguage rule that regularises irregular verbs. This interlanguage rule applies in a similar way to all irregular verbs, thus children produce utterances ...

  4. Irregular conformal block, spectral curve and flow equations

    International Nuclear Information System (INIS)

    Choi, Sang Kwan; Rim, Chaiho; Zhang, Hong

    2016-01-01

    Irregular conformal block is motivated by the Argyres-Douglas type of N=2 super conformal gauge theory. We investigate the classical/NS limit of irregular conformal block using the spectral curve on a Riemann surface with irregular punctures, which is equivalent to the loop equation of irregular matrix model. The spectral curve is reduced to the second order (Virasoro symmetry, SU(2) for the gauge theory) and third order (W_3 symmetry, SU(3)) differential equations of a polynomial with finite degree. The conformal and W symmetry generate the flow equations in the spectral curve and determine the irregular conformal block, hence the partition function of the Argyres-Douglas theory ala AGT conjecture.

  5. Star Formation Histories of Dwarf Irregular Galaxies

    Science.gov (United States)

    Skillman, Evan

    1995-07-01

    We propose to obtain deep WFPC2 `BVI' color-magnitude diagrams {CMDs} for the dwarf irregular {dI} Local Group galaxies GR 8, Leo A, Pegasus, and Sextans A. In addition to resolved stars, we will use star clusters, and especially any globulars, to probe the history of intense star formation. These data will allow us to map the Pop I and Pop II stellar components, and thereby construct the first detailed star formation histories for non-interacting dI galaxies. Our results will bear on a variety of astrophysical problems, including the evolution of small galaxies, distances in the Local Group, age-metallicity distributions in small galaxies, ages of dIs, and the physics of star formation. The four target galaxies are typical dI systems in terms of luminosity, gas content, and H II region abundance, and represent a range in current star forming activity. They are sufficiently near to allow us to reach to stars at M_V = 0, have 0.1 of the luminosity of the SMC and 0.25 of its oxygen abundance. Unlike the SMC, these dIs are not near giant galaxies. This project will allow the extension of our knowledge of stellar populations in star forming galaxies from the spirals in the Local Group down to its smallest members. We plan to take maximum advantage of the unique data which this project will provide. Our investigator team brings extensive and varied experience in studies of dwarf galaxies, stellar populations, imaging photometry, and stellar evolution to this project.

  6. Arabidopsis thaliana peroxidase N

    DEFF Research Database (Denmark)

    Mirza, Osman Asghar; Henriksen, A; Ostergaard, L

    2000-01-01

    The structure of the neutral peroxidase from Arabidopsis thaliana (ATP N) has been determined to a resolution of 1.9 A and a free R value of 20.5%. ATP N has the expected characteristic fold of the class III peroxidases, with a C(alpha) r.m.s.d. of 0.82 A when compared with horseradish peroxidase C...... (HRP C). HRP C is 54% identical to ATP N in sequence. When the structures of four class III plant peroxidases are superimposed, the regions with structural differences are non-randomly distributed; all are located in one half of the molecule. The architecture of the haem pocket of ATP N is very similar...... to that of HRP C, in agreement with the low small-molecule substrate specificity of all class III peroxidases. The structure of ATP N suggests that the pH dependence of the substrate turnover will differ from that of HRP C owing to differences in polarity of the residues in the substrate-access channel. Since...

  7. The embryogenesis in Arabidopsis thaliana following the γ-irradiation of the plants in the generative phase

    International Nuclear Information System (INIS)

    Akhundova, G.G.; Grinich, L.I.; Shevchenko, V.V.

    1978-01-01

    The flowers and young pods of the Arabidopsis thaliana (B 3 -B 7 phases of development) were subjected to the γ-irradiation with the dose of 4kr. The irradiation did not influence upon duration of phases of flower development, independently of the phase it has been conducted. Cytological characteristics of embryos are given for each phase under study. The duration of embyogenesis (from zygote up to spherical stage) under control and after irradiation was practically identical. The irradiation excited various anomalies of development. The most frequently met type of violations is the first division of apical cell by transverse septum instead of longitudinal one. Observed were the irregular division of suspensor cells, arrest of embryo apical cell division at normal suspensor division, irregular septum location and irregular form of embryo body. Maximum of violations in seed-lobe formation was marked after irradiation of young pods (B 6 -B 7 phases)

  8. Traffic dispersion through a series of signals with irregular split

    Science.gov (United States)

    Nagatani, Takashi

    2016-01-01

    We study the traffic behavior of a group of vehicles moving through a sequence of signals with irregular splits on a roadway. We present the stochastic model of vehicular traffic controlled by signals. The dynamic behavior of vehicular traffic is clarified by analyzing traffic pattern and travel time numerically. The group of vehicles breaks up more and more by the irregularity of signal's split. The traffic dispersion is induced by the irregular split. We show that the traffic dispersion depends highly on the cycle time and the strength of split's irregularity. Also, we study the traffic behavior through the series of signals at the green-wave strategy. The dependence of the travel time on offset time is derived for various values of cycle time. The region map of the traffic dispersion is shown in (cycle time, offset time)-space.

  9. Irregular Warfare: Impact on Future Professional Military Education

    National Research Council Canada - National Science Library

    Paschal, David G

    2006-01-01

    ... to operate effectively in an irregular warfare environment. The utility of a decisive war between nation states continues to decline and will eventually reach critical mass based upon the extreme imbalance of military power and a U.S. monopoly...

  10. Irregular Warfare: Special Operations Joint Professional Military Education Transformation

    National Research Council Canada - National Science Library

    Cannady, Bryan H

    2008-01-01

    ... on today's battlefront in Afghanistan and Iraq and in the Global War on Terrorism (GWOT). At the forefront of the GWOT and irregular warfare are the United States Special Operations Command (USSOCOM...

  11. Drug Intoxicated Irregular Fighters: Complications, Dangers, and Responses

    National Research Council Canada - National Science Library

    Kan, Paul R

    2008-01-01

    .... Drug consumption in contemporary wars has coincided with the use of child soldiers, has led to increased unpredictability among irregular fighters, provided the conditions for the breakdown of social...

  12. Justice: A Problem for Military Ethics during Irregular War

    National Research Council Canada - National Science Library

    Bauer, John W

    2008-01-01

    ... is?" or "Justice according to whom?" The relative nature of the term "justice" creates a problem for military ethics, particularly when soldiers try to determine what actions are morally acceptable when they are engaged in irregular warfare...

  13. Irregular Warfare: New Challenges for Civil-Military Relations

    National Research Council Canada - National Science Library

    Cronin, Patrick M

    2008-01-01

    .... Irregular warfare introduces new complications to what Eliot Cohen has called an unequal dialogue between civilian and military leaders in which civilian leaders hold the true power but must modulate...

  14. Role of parametric decay instabilities in generating ionospheric irregularities

    International Nuclear Information System (INIS)

    Kuo, S.P.; Cheo, B.R.; Lee, M.C.

    1983-01-01

    We show that purely growing instabilities driven by the saturation spectrum of parametric decay instabilities can produce a broad spectrum of ionospheric irregularities. The threshold field Vertical BarE/sub th/Vertical Bar of the instabilities decreases with the scale lengths lambda of the ionospheric irregularities as Vertical BarE/sub th/Vertical Barproportionallambda -2 in the small-scale range ( -2 with scale lengths larger than a few kilometers. The excitation of kilometer-scale irregularities is strictly restricted by the instabilities themselves and by the spatial inhomogeneity of the medium. These results are drawn from the analyses of four-wave interaction. Ion-neutral collisions impose no net effect on the instabilities when the excited ionospheric irregularities have a field-aligned nature

  15. Exploiting natural variation in Arabidopsis

    NARCIS (Netherlands)

    Molenaar, J.A.; Keurentjes, J.J.B.; Sanchez-Serrano, J.J.; Salinas, J.

    2014-01-01

    Natural variation for many traits is present within the species Arabidopsis thaliana. This chapter describes the use of natural variation to elucidate genes underlying the regulation of quantitative traits. It deals with the development and use of mapping populations, the detection and handling of

  16. Edge irregular total labellings for graphs of linear size

    DEFF Research Database (Denmark)

    Brandt, Stephan; Rautenbach, D.; Miškuf, J.

    2009-01-01

    As an edge variant of the well-known irregularity strength of a graph G = (V, E) we investigate edge irregular total labellings, i.e. functions f : V ∪ E → {1, 2, ..., k} such that f (u) + f (u v) + f (v) ≠ f (u) + f (u v) + f (v) for every pair of different edges u v, u v ∈ E. The smallest possi...

  17. Design Optimization of Irregular Cellular Structure for Additive Manufacturing

    Science.gov (United States)

    Song, Guo-Hua; Jing, Shi-Kai; Zhao, Fang-Lei; Wang, Ye-Dong; Xing, Hao; Zhou, Jing-Tao

    2017-09-01

    Irregularcellular structurehas great potential to be considered in light-weight design field. However, the research on optimizing irregular cellular structures has not yet been reporteddue to the difficulties in their modeling technology. Based on the variable density topology optimization theory, an efficient method for optimizing the topology of irregular cellular structures fabricated through additive manufacturing processes is proposed. The proposed method utilizes tangent circles to automatically generate the main outline of irregular cellular structure. The topological layoutof each cellstructure is optimized using the relative density informationobtained from the proposed modified SIMP method. A mapping relationship between cell structure and relative densityelement is builtto determine the diameter of each cell structure. The results show that the irregular cellular structure can be optimized with the proposed method. The results of simulation and experimental test are similar for irregular cellular structure, which indicate that the maximum deformation value obtained using the modified Solid Isotropic Microstructures with Penalization (SIMP) approach is lower 5.4×10-5 mm than that using the SIMP approach under the same under the same external load. The proposed research provides the instruction to design the other irregular cellular structure.

  18. Ionospheric Irregularities at Mars Probed by MARSIS Topside Sounding

    Science.gov (United States)

    Harada, Y.; Gurnett, D. A.; Kopf, A. J.; Halekas, J. S.; Ruhunusiri, S.

    2018-01-01

    The upper ionosphere of Mars contains a variety of perturbations driven by solar wind forcing from above and upward propagating atmospheric waves from below. Here we explore the global distribution and variability of ionospheric irregularities around the exobase at Mars by analyzing topside sounding data from the Mars Advanced Radar for Subsurface and Ionosphere Sounding (MARSIS) instrument on board Mars Express. As irregular structure gives rise to off-vertical echoes with excess propagation time, the diffuseness of ionospheric echo traces can be used as a diagnostic tool for perturbed reflection surfaces. The observed properties of diffuse echoes above unmagnetized regions suggest that ionospheric irregularities with horizontal wavelengths of tens to hundreds of kilometers are particularly enhanced in the winter hemisphere and at high solar zenith angles. Given the known inverse dependence of neutral gravity wave amplitudes on the background atmospheric temperature, the ionospheric irregularities probed by MARSIS are most likely associated with plasma perturbations driven by atmospheric gravity waves. Though extreme events with unusually diffuse echoes are more frequently observed for high solar wind dynamic pressures during some time intervals, the vast majority of the diffuse echo events are unaffected by varying solar wind conditions, implying limited influence of solar wind forcing on the generation of ionospheric irregularities. Combination of remote and in situ measurements of ionospheric irregularities would offer the opportunity for a better understanding of the ionospheric dynamics at Mars.

  19. Fatigue damage estimation using irregularity factor. First report, irregularity factor calculations for narrow and broadband random time histories

    Science.gov (United States)

    Susuki, I.

    1981-11-01

    The results of an analysis of the irregularity factors of stationary and Gaussian random processes which are generated by filtering the output of a pure or a band-limited white noise are presented. An ideal band pass filter, a trapezoidal filter, and a Butterworth type band pass filter were examined. It was found that the values of the irregularity factors were approximately equal among these filters if only the end-slopes were the same rates. As the band width of filters increases, irregularity factors increase monotonically and approach the respective constant values depending on the end-slopes. This implies that the noise characteristics relevant to the fatigue damage such as statistical aspects of the height of the rise and fall or the distribution of the peak values are not changed for a broad band random time history. It was also found that the effect of band limitation of input white noise on irregularity factors is negligibly small.

  20. Different myrosinase and idioblast distribution in Arabidopsis and Brassica napus

    DEFF Research Database (Denmark)

    Andreasson, Erik; Jørgensen, Lise Bolt; Höglund, Anna-Stina

    2001-01-01

    Arabidopsis, Brassica napus, Myrosinase, Myrosinase Binding Protein, Glucosinolates, Myrosin Cell, Immunocytochemistry......Arabidopsis, Brassica napus, Myrosinase, Myrosinase Binding Protein, Glucosinolates, Myrosin Cell, Immunocytochemistry...

  1. Orbital and Collisional Evolution of the Irregular Satellites

    Science.gov (United States)

    Nesvorný, David; Alvarellos, Jose L. A.; Dones, Luke; Levison, Harold F.

    2003-07-01

    The irregular moons of the Jovian planets are a puzzling part of the solar system inventory. Unlike regular satellites, the irregular moons revolve around planets at large distances in tilted and eccentric orbits. Their origin, which is intimately linked with the origin of the planets themselves, is yet to be explained. Here we report a study of the orbital and collisional evolution of the irregular satellites from times after their formation to the present epoch. The purpose of this study is to find out the features of the observed irregular moons that can be attributed to this evolution and separate them from signatures of the formation process. We numerically integrated ~60,000 test satellite orbits to map orbital locations that are stable on long time intervals. We found that the orbits highly inclined to the ecliptic are unstable due to the effect of the Kozai resonance, which radially stretches them so that satellites either escape from the Hill sphere, collide with massive inner moons, or impact the parent planet. We also found that prograde satellite orbits with large semimajor axes are unstable due to the effect of the evection resonance, which locks the orbit's apocenter to the apparent motion of the Sun around the parent planet. In such a resonance, the effect of solar tides on a resonant moon accumulates at each apocenter passage of the moon, which causes a radially outward drift of its orbital apocenter; once close to the Hill sphere, the moon escapes. By contrast, retrograde moons with large orbital semimajor axes are long-lived. We have developed an analytic model of the distant satellite orbits and used it to explain the results of our numerical experiments. In particular, we analytically studied the effect of the Kozai resonance. We numerically integrated the orbits of the 50 irregular moons (known by 2002 August 16) for 108 yr. All orbits were stable on this time interval and did not show any macroscopic variations that would indicate

  2. Geostatistical regularization operators for geophysical inverse problems on irregular meshes

    Science.gov (United States)

    Jordi, C.; Doetsch, J.; Günther, T.; Schmelzbach, C.; Robertsson, J. OA

    2018-05-01

    Irregular meshes allow to include complicated subsurface structures into geophysical modelling and inverse problems. The non-uniqueness of these inverse problems requires appropriate regularization that can incorporate a priori information. However, defining regularization operators for irregular discretizations is not trivial. Different schemes for calculating smoothness operators on irregular meshes have been proposed. In contrast to classical regularization constraints that are only defined using the nearest neighbours of a cell, geostatistical operators include a larger neighbourhood around a particular cell. A correlation model defines the extent of the neighbourhood and allows to incorporate information about geological structures. We propose an approach to calculate geostatistical operators for inverse problems on irregular meshes by eigendecomposition of a covariance matrix that contains the a priori geological information. Using our approach, the calculation of the operator matrix becomes tractable for 3-D inverse problems on irregular meshes. We tested the performance of the geostatistical regularization operators and compared them against the results of anisotropic smoothing in inversions of 2-D surface synthetic electrical resistivity tomography (ERT) data as well as in the inversion of a realistic 3-D cross-well synthetic ERT scenario. The inversions of 2-D ERT and seismic traveltime field data with geostatistical regularization provide results that are in good accordance with the expected geology and thus facilitate their interpretation. In particular, for layered structures the geostatistical regularization provides geologically more plausible results compared to the anisotropic smoothness constraints.

  3. Total edge irregularity strength of (n,t)-kite graph

    Science.gov (United States)

    Winarsih, Tri; Indriati, Diari

    2018-04-01

    Let G(V, E) be a simple, connected, and undirected graph with vertex set V and edge set E. A total k-labeling is a map that carries vertices and edges of a graph G into a set of positive integer labels {1, 2, …, k}. An edge irregular total k-labeling λ :V(G)\\cup E(G)\\to \\{1,2,\\ldots,k\\} of a graph G is a labeling of vertices and edges of G in such a way that for any different edges e and f, weights wt(e) and wt(f) are distinct. The weight wt(e) of an edge e = xy is the sum of the labels of vertices x and y and the label of the edge e. The total edge irregularity strength of G, tes(G), is defined as the minimum k for which a graph G has an edge irregular total k-labeling. An (n, t)-kite graph consist of a cycle of length n with a t-edge path (the tail) attached to one vertex of a cycle. In this paper, we investigate the total edge irregularity strength of the (n, t)-kite graph, with n > 3 and t > 1. We obtain the total edge irregularity strength of the (n, t)-kite graph is tes((n, t)-kite) = \\lceil \\frac{n+t+2}{3}\\rceil .

  4. On the Automatic Parallelization of Sparse and Irregular Fortran Programs

    Directory of Open Access Journals (Sweden)

    Yuan Lin

    1999-01-01

    Full Text Available Automatic parallelization is usually believed to be less effective at exploiting implicit parallelism in sparse/irregular programs than in their dense/regular counterparts. However, not much is really known because there have been few research reports on this topic. In this work, we have studied the possibility of using an automatic parallelizing compiler to detect the parallelism in sparse/irregular programs. The study with a collection of sparse/irregular programs led us to some common loop patterns. Based on these patterns new techniques were derived that produced good speedups when manually applied to our benchmark codes. More importantly, these parallelization methods can be implemented in a parallelizing compiler and can be applied automatically.

  5. Measurement of Dynamic Friction Coefficient on the Irregular Free Surface

    International Nuclear Information System (INIS)

    Yeom, S. H.; Seo, K. S.; Lee, J. H.; Lee, K. H.

    2007-01-01

    A spent fuel storage cask must be estimated for a structural integrity when an earthquake occurs because it freely stands on ground surface without a restriction condition. Usually the integrity estimation for a seismic load is performed by a FEM analysis, the friction coefficient for a standing surface is an important parameter in seismic analysis when a sliding happens. When a storage cask is placed on an irregular ground surface, measuring a friction coefficient of an irregular surface is very difficult because the friction coefficient is affected by the surface condition. In this research, dynamic friction coefficients on the irregular surfaces between a concrete cylinder block and a flat concrete slab are measured with two methods by one direction actuator

  6. NEOWISE: OBSERVATIONS OF THE IRREGULAR SATELLITES OF JUPITER AND SATURN

    Energy Technology Data Exchange (ETDEWEB)

    Grav, T. [Planetary Science Institute, Tucson, AZ 85719 (United States); Bauer, J. M.; Mainzer, A. K.; Masiero, J. R.; Sonnett, S.; Kramer, E. [Jet Propulsion Laboratory, California Institute of Technology, Pasadena, CA 91109 (United States); Nugent, C. R.; Cutri, R. M., E-mail: tgrav@psi.edu [Infrared Processing and Analysis Center, California Institute of Technology, Pasadena, CA 91125 (United States)

    2015-08-10

    We present thermal model fits for 11 Jovian and 3 Saturnian irregular satellites based on measurements from the WISE/NEOWISE data set. Our fits confirm spacecraft-measured diameters for the objects with in situ observations (Himalia and Phoebe) and provide diameters and albedo for 12 previously unmeasured objects, 10 Jovian and 2 Saturnian irregular satellites. The best-fit thermal model beaming parameters are comparable to what is observed for other small bodies in the outer solar system, while the visible, W1, and W2 albedos trace the taxonomic classifications previously established in the literature. Reflectance properties for the irregular satellites measured are similar to the Jovian Trojan and Hilda Populations, implying common origins.

  7. Bottomside sinusoidal irregularities in the equatorial F region

    Science.gov (United States)

    Valladares, C. E.; Hanson, W. B.; Mcclure, J. P.; Cragin, B. L.

    1983-01-01

    By using the Ogo 6 satellite, McClure and Hanson (1973) have discovered sinusoidal irregularities in the equatorial F region ion number density. In the present investigation, a description is provided of the properties of a distinct category of sinusoidal irregularities found in equatorial data from the AE-C and AE-E satellites. The observed scale sizes vary from about 300 m to 3 km in the direction perpendicular to B, overlapping with and extending the range observed by using Ogo 6. Attention is given to low and high resolution data, a comparison with Huancayo ionograms, the confinement of 'bottomside sinusoidal' (BSS) irregularities essentially to the bottomside of the F layer, spectral characteristics, and BSS, scintillation, and ionosonde observations.

  8. Irregular flowering patterns in terrestrial orchids: theories vs. empirical data

    Directory of Open Access Journals (Sweden)

    P. Kindlmann

    2001-11-01

    Full Text Available Empirical data on many species of terrestrial orchids suggest that their between-year flowering pattern is extremely irregular and unpredictable. A long search for the reason has hitherto proved inconclusive. Here we summarise and critically review the hypotheses that were put forward as explanations of this phenomenon: irregular flowering was attributed to costs associated with sexual reproduction, to herbivory, or to the chaotic behaviour of the system represented by difference equations describing growth of the vegetative and reproductive organs. None of these seems to explain fully the events of a transition from flowering one year to sterility or absence the next year. Data on the seasonal growth of leaves and inflorescence of two terrestrial orchid species, Epipactis albensis and Dactylorhiza fuchsii and our previous results are then used here to fill gaps in what has been published until now and to test alternative explanations of the irregular flowering patterns of orchids.

  9. Track Irregularity Time Series Analysis and Trend Forecasting

    Directory of Open Access Journals (Sweden)

    Jia Chaolong

    2012-01-01

    Full Text Available The combination of linear and nonlinear methods is widely used in the prediction of time series data. This paper analyzes track irregularity time series data by using gray incidence degree models and methods of data transformation, trying to find the connotative relationship between the time series data. In this paper, GM (1,1 is based on first-order, single variable linear differential equations; after an adaptive improvement and error correction, it is used to predict the long-term changing trend of track irregularity at a fixed measuring point; the stochastic linear AR, Kalman filtering model, and artificial neural network model are applied to predict the short-term changing trend of track irregularity at unit section. Both long-term and short-term changes prove that the model is effective and can achieve the expected accuracy.

  10. Exploring Manycore Multinode Systems for Irregular Applications with FPGA Prototyping

    Energy Technology Data Exchange (ETDEWEB)

    Ceriani, Marco; Palermo, Gianluca; Secchi, Simone; Tumeo, Antonino; Villa, Oreste

    2013-04-29

    We present a prototype of a multi-core architecture implemented on FPGA, designed to enable efficient execution of irregular applications on distributed shared memory machines, while maintaining high performance on regular workloads. The architecture is composed of off-the-shelf soft-core cores, local interconnection and memory interface, integrated with custom components that optimize it for irregular applications. It relies on three key elements: a global address space, multithreading, and fine-grained synchronization. Global addresses are scrambled to reduce the formation of network hot-spots, while the latency of the transactions is covered by integrating an hardware scheduler within the custom load/store buffers to take advantage from the availability of multiple executions threads, increasing the efficiency in a transparent way to the application. We evaluated a dual node system irregular kernels showing scalability in the number of cores and threads.

  11. Criticality predicts maximum irregularity in recurrent networks of excitatory nodes.

    Directory of Open Access Journals (Sweden)

    Yahya Karimipanah

    Full Text Available A rigorous understanding of brain dynamics and function requires a conceptual bridge between multiple levels of organization, including neural spiking and network-level population activity. Mounting evidence suggests that neural networks of cerebral cortex operate at a critical regime, which is defined as a transition point between two phases of short lasting and chaotic activity. However, despite the fact that criticality brings about certain functional advantages for information processing, its supporting evidence is still far from conclusive, as it has been mostly based on power law scaling of size and durations of cascades of activity. Moreover, to what degree such hypothesis could explain some fundamental features of neural activity is still largely unknown. One of the most prevalent features of cortical activity in vivo is known to be spike irregularity of spike trains, which is measured in terms of the coefficient of variation (CV larger than one. Here, using a minimal computational model of excitatory nodes, we show that irregular spiking (CV > 1 naturally emerges in a recurrent network operating at criticality. More importantly, we show that even at the presence of other sources of spike irregularity, being at criticality maximizes the mean coefficient of variation of neurons, thereby maximizing their spike irregularity. Furthermore, we also show that such a maximized irregularity results in maximum correlation between neuronal firing rates and their corresponding spike irregularity (measured in terms of CV. On the one hand, using a model in the universality class of directed percolation, we propose new hallmarks of criticality at single-unit level, which could be applicable to any network of excitable nodes. On the other hand, given the controversy of the neural criticality hypothesis, we discuss the limitation of this approach to neural systems and to what degree they support the criticality hypothesis in real neural networks. Finally

  12. Propagation and scattering of electromagnetic waves by the ionospheric irregularities

    International Nuclear Information System (INIS)

    Ho, A.Y.; Kuo, S.P.; Lee, M.C.

    1993-01-01

    The problem of wave propagation and scattering in the ionosphere is particularly important in the areas of communications, remote-sensing and detection. The ionosphere is often perturbed with coherently structured (quasiperiodic) density irregularities. Experimental observations suggest that these irregularities could give rise to significant ionospheric effect on wave propagation such as causing spread-F of the probing HF sounding signals and scintillation of beacon satellite signals. It was show by the latter that scintillation index S 4 ∼ 0.5 and may be as high as 0.8. In this work a quasi-particle theory is developed to study the scintillation phenomenon. A Wigner distribution function for the wave intensity in the (k,r) space is introduced and its governing equation is derived with an effective collision term giving rise to the attenuation and scattering of the wave. This kinetic equation leads to a hierarchy of moment equations in r space. This systems of equations is then truncated to the second moment which is equivalent to assuming a cold quasi-particle distribution In this analysis, the irregularities are modeled as a two dimensional density modulation on an uniform background plasma. The analysis shows that this two dimensional density grating, effectively modulates the intensity of the beacon satellite signals. This spatial modulation of the wave intensity is converted into time modulation due to the drift of the ionospheric irregularities, which then contributes to the scintillation of the beacon satellite signals. Using the proper plasma parameters and equatorial measured data of irregularities, it is shown that the scintillation index defined by S4=( 2 >- 2 )/ 2 where stands for spatial average over an irregularity wavelength is in the range of the experimentally detected values

  13. Irregular Shaped Building Design Optimization with Building Information Modelling

    Directory of Open Access Journals (Sweden)

    Lee Xia Sheng

    2016-01-01

    Full Text Available This research is to recognise the function of Building Information Modelling (BIM in design optimization for irregular shaped buildings. The study focuses on a conceptual irregular shaped “twisted” building design similar to some existing sculpture-like architectures. Form and function are the two most important aspects of new buildings, which are becoming more sophisticated as parts of equally sophisticated “systems” that we are living in. Nowadays, it is common to have irregular shaped or sculpture-like buildings which are very different when compared to regular buildings. Construction industry stakeholders are facing stiff challenges in many aspects such as buildability, cost effectiveness, delivery time and facility management when dealing with irregular shaped building projects. Building Information Modelling (BIM is being utilized to enable architects, engineers and constructors to gain improved visualization for irregular shaped buildings; this has a purpose of identifying critical issues before initiating physical construction work. In this study, three variations of design options differing in rotating angle: 30 degrees, 60 degrees and 90 degrees are created to conduct quantifiable comparisons. Discussions are focused on three major aspects including structural planning, usable building space, and structural constructability. This research concludes that Building Information Modelling is instrumental in facilitating design optimization for irregular shaped building. In the process of comparing different design variations, instead of just giving “yes or no” type of response, stakeholders can now easily visualize, evaluate and decide to achieve the right balance based on their own criteria. Therefore, construction project stakeholders are empowered with superior evaluation and decision making capability.

  14. Low frequency sound reproduction in irregular rooms using CABS (Control Acoustic Bass System)

    DEFF Research Database (Denmark)

    Celestinos, Adrian; Nielsen, Sofus Birkedal

    2011-01-01

    of an irregular room model using the FDTD (Finite Difference Time Domain) method has been presented. CABS has been simulated in the irregular room model. Measurements of CABS in a real irregular room have been performed. The performance of CABS was affected by the irregular shape of the room due to the corner...

  15. Characterizing spontaneous irregular behavior in coupled map lattices

    International Nuclear Information System (INIS)

    Dobyns, York; Atmanspacher, Harald

    2005-01-01

    Two-dimensional coupled map lattices display, in a specific parameter range, a stable phase (quasi-) periodic in both space and time. With small changes to the model parameters, this stable phase develops spontaneous eruptions of non-periodic behavior. Although this behavior itself appears irregular, it can be characterized in a systematic fashion. In particular, parameter-independent features of the spontaneous eruptions may allow useful empirical characterizations of other phenomena that are intrinsically hard to predict and reproduce. Specific features of the distributions of lifetimes and emergence rates of irregular states display such parameter-independent properties

  16. Characterizing spontaneous irregular behavior in coupled map lattices

    Energy Technology Data Exchange (ETDEWEB)

    Dobyns, York [PEAR, Princeton University Princeton, NJ 08544-5263 (United States); Atmanspacher, Harald [Institut fuer Grenzgebiete der Psychologie und Psychohygiene Wilhelmstrasse 3a, Freiburg 79098 (Germany)]. E-mail: haa@igpp.de

    2005-04-01

    Two-dimensional coupled map lattices display, in a specific parameter range, a stable phase (quasi-) periodic in both space and time. With small changes to the model parameters, this stable phase develops spontaneous eruptions of non-periodic behavior. Although this behavior itself appears irregular, it can be characterized in a systematic fashion. In particular, parameter-independent features of the spontaneous eruptions may allow useful empirical characterizations of other phenomena that are intrinsically hard to predict and reproduce. Specific features of the distributions of lifetimes and emergence rates of irregular states display such parameter-independent properties.

  17. [Artificial cycle therapy of acupuncture and moxibustion for irregular menstruation].

    Science.gov (United States)

    Wu, Jie; Yang, Lijie; Chen, Yajie; Li, Qing; Chen, Lin

    2015-03-01

    Through the discussion on TCM physiological characters of females in follicular, ovulatory, luteal and menstrual phases and treatment principles, the clinical application of artificial cycle therapy of acupuncture and moxibustion was introduced for irregular menstruation and the typical cases were attached. It is suggested that the menstrual cycle follows the growth-consumption rule of yin, yang, qi and blood. The corresponding treatment principles should be applied in accordance with the change rule of menstrual cycle. Hence, it is worth to adopt the artificial cycle therapy of acupuncture and moxibustion for irregular menstruation in clinical application.

  18. Uniform irradiation of irregularly shaped cavities for photodynamic therapy.

    Science.gov (United States)

    Rem, A I; van Gemert, M J; van der Meulen, F W; Gijsbers, G H; Beek, J F

    1997-03-01

    It is difficult to achieve a uniform light distribution in irregularly shaped cavities. We have conducted a study on the use of hollow 'integrating' moulds for more uniform light delivery of photodynamic therapy in irregularly shaped cavities such as the oral cavity. Simple geometries such as a cubical box, a sphere, a cylinder and a 'bottle-neck' geometry have been investigated experimentally and the results have been compared with computed light distributions obtained using the 'radiosity method'. A high reflection coefficient of the mould and the best uniform direct irradiance possible on the inside of the mould were found to be important determinants for achieving a uniform light distribution.

  19. Using "Arabidopsis" Genetic Sequences to Teach Bioinformatics

    Science.gov (United States)

    Zhang, Xiaorong

    2009-01-01

    This article describes a new approach to teaching bioinformatics using "Arabidopsis" genetic sequences. Several open-ended and inquiry-based laboratory exercises have been designed to help students grasp key concepts and gain practical skills in bioinformatics, using "Arabidopsis" leucine-rich repeat receptor-like kinase (LRR…

  20. Reference: 255 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ases, AtIPK1 and AtIPK2beta, for the later steps of phytate synthesis in Arabidopsis thaliana. Coincident disruption...olyphosphate kinases in phosphate signaling biology. Generation of phytate-free seeds in Arabidopsis through disruption

  1. Arabidopsis CDS blastp result: AK108458 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK108458 002-143-D05 At4g35000.1 L-ascorbate peroxidase 3 (APX3) identical to ascorbat...e peroxidase 3 [Arabidopsis thaliana] GI:2444019, L-ascorbate peroxidase [Arabidopsis thaliana] gi|152379...1|emb|CAA66926; similar to ascorbate peroxidase [Gossypium hirsutum] gi|1019946|gb|AAB52954 2e-35 ...

  2. Arabidopsis CDS blastp result: AK070842 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK070842 J023074O14 At4g35000.1 L-ascorbate peroxidase 3 (APX3) identical to ascorbat...e peroxidase 3 [Arabidopsis thaliana] GI:2444019, L-ascorbate peroxidase [Arabidopsis thaliana] gi|1523791...|emb|CAA66926; similar to ascorbate peroxidase [Gossypium hirsutum] gi|1019946|gb|AAB52954 1e-112 ...

  3. Runtime buffer management to improve the performance in irregular ...

    Indian Academy of Sciences (India)

    S¯adhan¯a Vol. 40, Part 4, June 2015, pp. 1117–1137. c Indian Academy of Sciences. Runtime buffer management to improve the performance in irregular Network-on-Chip architecture. UMAMAHESWARI S1,∗, MEGANATHAN D2 and. RAJA PAUL PERINBAM J3. 1Department of Information Technology, Anna University, ...

  4. Structure Irregularity Impedes Drop Roll-Off at Superhydrophobic Surfaces

    DEFF Research Database (Denmark)

    Larsen, Simon Tylsgaard; Andersen, Nis Korsgaard; Søgaard, Emil

    2014-01-01

    -off angles is found to be caused by a decrease of the receding contact angle, which in turn is caused by an increase of the triple phase contact line of the drops for those more irregular surfaces. To understand the observation, we propose to treat the microdrops as rigid bodies and apply a torque balance...

  5. The regularized monotonicity method: detecting irregular indefinite inclusions

    DEFF Research Database (Denmark)

    Garde, Henrik; Staboulis, Stratos

    2018-01-01

    inclusions, where the conductivity distribution has both more and less conductive parts relative to the background conductivity; one such method is the monotonicity method of Harrach, Seo, and Ullrich. We formulate the method for irregular indefinite inclusions, meaning that we make no regularity assumptions...

  6. Size and Albedo of Irregular Saturnian Satellites from Spitzer Observations

    NARCIS (Netherlands)

    Mueller, Michael; Grav, T.; Trilling, D.; Stansberry, J.; Sykes, M.

    2008-01-01

    Using MIPS onboard the Spitzer Space Telescope, we observed the thermal emission (24 and, for some targets, 70 um) of eight irregular satellites of Saturn: Albiorix, Siarnaq, Paaliaq, Kiviuq, Ijiraq, Tarvos, Erriapus, and Ymir. We determined the size and albedo of all targets. An analysis of

  7. Interagency Cooperation for Irregular Warfare at the Combatant Command

    Science.gov (United States)

    2009-01-01

    enemy’s command capability.16 Salamoni argued that the term “irregular warfare” belies an ethnocentric perspective of conflict that will limit military...duty military staffing to form the nucleus of the organization, which would receive augmentation from additional assigned reservists and interagency

  8. Convection-diffusion lattice Boltzmann scheme for irregular lattices

    NARCIS (Netherlands)

    Sman, van der R.G.M.; Ernst, M.H.

    2000-01-01

    In this paper, a lattice Boltzmann (LB) scheme for convection diffusion on irregular lattices is presented, which is free of any interpolation or coarse graining step. The scheme is derived using the axioma that the velocity moments of the equilibrium distribution equal those of the

  9. Swiveling Lathe Jaw Concept for Holding Irregular Pieces

    Science.gov (United States)

    David, J.

    1966-01-01

    Clamp holds irregularly shaped pieces in lathe chuck without damage and eliminates excessive time in selecting optimum mounting. Interchangeable jaws ride in standard jaw slots but swivel so that the jaw face bears evenly against the workpiece regardless of contour. The jaws can be used on both engine and turret lathes.

  10. Why type 2 supernovae do not explode in irregular galaxies

    International Nuclear Information System (INIS)

    Shklovskij, I.S.

    1984-01-01

    The conclusion is drawn that reason for an absence of type 2 supernovae explosions in irregular galaxies is their peculiar chemical composition. The observed lack of stellar wind from massive hot giants is due to relatively low heavy element abundance. For this reason evolving massive stars do not form an extended dense envelopes that is a necessary condition for the type 2 supernova phenomenon

  11. First stellar abundances in the dwarf irregular galaxy Sextans A

    NARCIS (Netherlands)

    Kaufer, A; Venn, KA; Tolstoy, E; Pinte, C; Kudritzki, RP

    We present the abundance analyses of three isolated A-type supergiant stars in the dwarf irregular galaxy Sextans A (= DDO 75) from high-resolution spectra obtained with the Ultraviolet-Visual Echelle Spectrograph (UVES) on the Kueyen telescope (UT2) of the ESO Very Large Telescope (VLT). Detailed

  12. Spectral element method for wave propagation on irregular domains

    Indian Academy of Sciences (India)

    Yan Hui Geng

    2018-03-14

    Mar 14, 2018 ... Abstract. A spectral element approximation of acoustic propagation problems combined with a new mapping method on irregular domains is proposed. Following this method, the Gauss–Lobatto–Chebyshev nodes in the standard space are applied to the spectral element method (SEM). The nodes in the ...

  13. On the Total Edge Irregularity Strength of Generalized Butterfly Graph

    Science.gov (United States)

    Dwi Wahyuna, Hafidhyah; Indriati, Diari

    2018-04-01

    Let G(V, E) be a connected, simple, and undirected graph with vertex set V and edge set E. A total k-labeling is a map that carries vertices and edges of a graph G into a set of positive integer labels {1, 2, …, k}. An edge irregular total k-labeling λ: V(G) ∪ E(G) → {1, 2, …, k} of a graph G is a total k-labeling such that the weights calculated for all edges are distinct. The weight of an edge uv in G, denoted by wt(uv), is defined as the sum of the label of u, the label of v, and the label of uv. The total edge irregularity strength of G, denoted by tes(G), is the minimum value of the largest label k over all such edge irregular total k-labelings. A generalized butterfly graph, BFn , obtained by inserting vertices to every wing with assumption that sum of inserting vertices to every wing are same then it has 2n + 1 vertices and 4n ‑ 2 edges. In this paper, we investigate the total edge irregularity strength of generalized butterfly graph, BFn , for n > 2. The result is tes(B{F}n)=\\lceil \\frac{4n}{3}\\rceil .

  14. On a new process for cusp irregularity production

    Directory of Open Access Journals (Sweden)

    H. C. Carlson

    2008-09-01

    Full Text Available Two plasma instability mechanisms were thought until 2007 to dominate the formation of plasma irregularities in the F region high latitude and polar ionosphere; the gradient-drift driven instability, and the velocity-shear driven instability. The former mechanism was accepted as accounting for plasma structuring in polar cap patches, the latter for plasma structuring in polar cap sun aligned arcs. Recent work has established the need to replace this view of the past two decades with a new patch plasma structuring process (not a new mechanism, whereby shear-driven instabilities first rapidly structure the entering plasma, after which gradient drift instabilities build on these large "seed" irregularities. Correct modeling of cusp and early polar cap patch structuring will not be accomplished without allowing for this compound process. This compound process explains several previously unexplained characteristics of cusp and early polar cap patch irregularities. Here we introduce additional data, coincident in time and space, to extend that work to smaller irregularity scale sizes and relate it to the structured cusp current system.

  15. Irregular ionization and scintillation of the ionosphere in equator region

    International Nuclear Information System (INIS)

    Shinno, Kenji

    1974-01-01

    The latest studies on the scintillation in satellite communication and its related irregularities of ionosphere are reviewed. They were made clear by means of spread-F, the direct measurement with scientific satellites, VHF radar observation, and radio wave propagation in equator region. The fundamental occurrence mechanism may be instability of plasma caused by the interaction of movement of neutral atmosphere and magnetic field. Comparison of the main characteristics of scintillation, namely the dependence on region, solar activity, season, local time, geomagnetic activity, movement in ionosphere, scattering source, frequency and transmission mode, was made and the correlation among spread-F, TEP and scintillation was summarized. The latest principal studies were the observations made by Intelsat and by ATS. Scintillation of Syncom-3 and Intelsat-II-F2 and spread-F by ionosphere observation were compared by Huang. It is reasonable to consider that the occurrence of scintillation is caused by the irregularities in ionosphere which are particular in equator region, because of the similar characteristics of spread-F and VHF propagation in the equator region. These three phenomena may occur in relation to the irregularities of ionosphere. Interpretation of spread-F and the abnormal propagation wave across the equator are given. The study using VHF radar and the movement of irregular ionization by the direct observation with artificial satellites are reviewd. (Iwakiri, K.)

  16. Third-order theory for multi-directional irregular waves

    DEFF Research Database (Denmark)

    Madsen, Per A.; Fuhrman, David R.

    2012-01-01

    A new third-order solution for multi-directional irregular water waves in finite water depth is presented. The solution includes explicit expressions for the surface elevation, the amplitude dispersion and the vertical variation of the velocity potential. Expressions for the velocity potential at...

  17. Irregular menses: an independent risk factor for gestational diabetes mellitus.

    Science.gov (United States)

    Haver, Mary Claire; Locksmith, Gregory J; Emmet, Emily

    2003-05-01

    Our purpose was to determine whether a history of irregular menses predicts gestational diabetes mellitus independently of traditional risk factors. We analyzed demographic characteristics, body mass index, and menstrual history of 85 pregnant women with gestational diabetes mellitus and compared them with 85 systematically selected control subjects who were matched for age, race, and delivery year. Subjects with pregestational diabetes mellitus, previous gestational diabetes mellitus, family history of diabetes mellitus, weight >200 pounds, previous macrosomic infants, or previous stillbirth were excluded. Demographic characteristics between case and control groups were similar. Mean body mass index was higher among cases (26.5 kg/m(2)) versus control subjects (24.5 kg/m(2), P =.004). Irregular cycles were more prevalent in the cases (24% vs 7%, P =.006). With the use of body mass index as a stratification factor, menstrual irregularity maintained a strong association with gestational diabetes mellitus (P =.014). A history of irregular menstrual cycles was a significant independent predictor of gestational diabetes mellitus. If selective screening is implemented for gestational diabetes mellitus, such history should be considered in the decision of whom to test.

  18. Spectral element method for wave propagation on irregular domains

    Indian Academy of Sciences (India)

    A spectral element approximation of acoustic propagation problems combined with a new mapping method on irregular domains is proposed. Following this method, the Gauss–Lobatto–Chebyshev nodes in the standard space are applied to the spectral element method (SEM). The nodes in the physical space are ...

  19. Characteristics of low latitude ionospheric E-region irregularities ...

    Indian Academy of Sciences (India)

    154°E, dip angle = 37.3°, sub-ionospheric dip = 34°) have been analyzed to study the behaviour of ionospheric E-region irregularities during the active solar and magnetic periods. The autocorrelation functions, power spectral densities, signal de-correlation times are computed to study the temporal features of ionospheric ...

  20. Classical limit of irregular blocks and Mathieu functions

    International Nuclear Information System (INIS)

    Piątek, Marcin; Pietrykowski, Artur R.

    2016-01-01

    The Nekrasov-Shatashvili limit of the N = 2 SU(2) pure gauge (Ω-deformed) super Yang-Mills theory encodes the information about the spectrum of the Mathieu operator. On the other hand, the Mathieu equation emerges entirely within the frame of two-dimensional conformal field theory (2d CFT) as the classical limit of the null vector decoupling equation for some degenerate irregular block. Therefore, it seems to be possible to investigate the spectrum of the Mathieu operator employing the techniques of 2d CFT. To exploit this strategy, a full correspondence between the Mathieu equation and its realization within 2d CFT has to be established. In our previous paper http://dx.doi.org/10.1007/JHEP12(2014)032, we have found that the expression of the Mathieu eigenvalue given in terms of the classical irregular block exactly coincides with the well known weak coupling expansion of this eigenvalue in the case in which the auxiliary parameter is the noninteger Floquet exponent. In the present work we verify that the formula for the corresponding eigenfunction obtained from the irregular block reproduces the so-called Mathieu exponent from which the noninteger order elliptic cosine and sine functions may be constructed. The derivation of the Mathieu equation within the formalism of 2d CFT is based on conjectures concerning the asymptotic behaviour of irregular blocks in the classical limit. A proof of these hypotheses is sketched. Finally, we speculate on how it could be possible to use the methods of 2d CFT in order to get from the irregular block the eigenvalues of the Mathieu operator in other regions of the coupling constant.

  1. Comparison of correlation analysis techniques for irregularly sampled time series

    Directory of Open Access Journals (Sweden)

    K. Rehfeld

    2011-06-01

    Full Text Available Geoscientific measurements often provide time series with irregular time sampling, requiring either data reconstruction (interpolation or sophisticated methods to handle irregular sampling. We compare the linear interpolation technique and different approaches for analyzing the correlation functions and persistence of irregularly sampled time series, as Lomb-Scargle Fourier transformation and kernel-based methods. In a thorough benchmark test we investigate the performance of these techniques.

    All methods have comparable root mean square errors (RMSEs for low skewness of the inter-observation time distribution. For high skewness, very irregular data, interpolation bias and RMSE increase strongly. We find a 40 % lower RMSE for the lag-1 autocorrelation function (ACF for the Gaussian kernel method vs. the linear interpolation scheme,in the analysis of highly irregular time series. For the cross correlation function (CCF the RMSE is then lower by 60 %. The application of the Lomb-Scargle technique gave results comparable to the kernel methods for the univariate, but poorer results in the bivariate case. Especially the high-frequency components of the signal, where classical methods show a strong bias in ACF and CCF magnitude, are preserved when using the kernel methods.

    We illustrate the performances of interpolation vs. Gaussian kernel method by applying both to paleo-data from four locations, reflecting late Holocene Asian monsoon variability as derived from speleothem δ18O measurements. Cross correlation results are similar for both methods, which we attribute to the long time scales of the common variability. The persistence time (memory is strongly overestimated when using the standard, interpolation-based, approach. Hence, the Gaussian kernel is a reliable and more robust estimator with significant advantages compared to other techniques and suitable for large scale application to paleo-data.

  2. Three novel rice genes closely related to the Arabidopsis IRX9, IRX9L, and IRX14 genes and their roles in xylan biosynthesis

    Directory of Open Access Journals (Sweden)

    Dawn eChiniquy

    2013-04-01

    Full Text Available Xylan is the second most abundant polysaccharide on Earth, and represents a major component of both dicot wood and the cell walls of grasses. Much knowledge has been gained from studies of xylan biosynthesis in the model plant, Arabidopsis. In particular, the irregular xylem (irx mutants, named for their collapsed xylem cells, have been essential in gaining a greater understanding of the genes involved in xylan biosynthesis. In contrast, xylan biosynthesis in grass cell walls is poorly understood. We identified three rice genes Os07g49370 (OsIRX9, Os01g48440 (OsIRX9L, and Os06g47340 (OsIRX14, from glycosyltransferase family 43 as putative orthologs to the putative β-1,4-xylan backbone elongating Arabidopsis IRX9, IRX9L, and IRX14 genes, respectively. We demonstrate that the overexpression of the closely related rice genes, in full or partly complement the two well-characterized Arabidopsis irregular xylem (irx mutants: irx9 and irx14. Complementation was assessed by measuring dwarfed phenotypes, irregular xylem cells in stem cross sections, xylose content of stems, xylosyltransferase activity of stems, and stem strength. The expression of OsIRX9 in the irx9 mutant resulted in xylosyltransferase activity of stems that was over double that of wild type plants, and the stem strength of this line increased to 124% above that of wild type. Taken together, our results suggest that OsIRX9/OsIRX9L, and OsIRX14, have similar functions to the Arabidopsis IRX9 and IRX14 genes, respectively. Furthermore, our expression data indicate that OsIRX9 and OsIRX9L may function in building the xylan backbone in the secondary and primary cell walls, respectively. Our results provide insight into xylan biosynthesis in rice and how expression of a xylan synthesis gene may be modified to increase stem strength.

  3. Wettability measurements of irregular shapes with Wilhelmy plate method

    Science.gov (United States)

    Park, Jaehyung; Pasaogullari, Ugur; Bonville, Leonard

    2018-01-01

    One of the most accurate methods for measuring the dynamic contact angle of liquids on solid surfaces is the Wilhelmy plate method. This method generally requires the use of rectangular samples having a constant perimeter in the liquid during advancing and receding cycles. A new formulation based on the Wilhelmy force balance equation to determine the contact angle for plate samples with irregular shapes has been developed. This method employs a profile plot obtained from an optical image to determine the perimeter (i.e. wetted length) of the sample as a function of the immersion depth. The raw force data measured by the force tensiometer is manipulated using the profile plot and the Wilhelmy equation to determine the wetting force and consequently advancing and the receding contact angle. This method is verified with both triangular and irregular PTFE samples in water, and measured contact angles are in good agreement with results from conventional regular shaped samples with a constant perimeter.

  4. Rocket measurements of electron density irregularities during MAC/SINE

    Science.gov (United States)

    Ulwick, J. C.

    1989-01-01

    Four Super Arcas rockets were launched at the Andoya Rocket Range, Norway, as part of the MAC/SINE campaign to measure electron density irregularities with high spatial resolution in the cold summer polar mesosphere. They were launched as part of two salvos: the turbulent/gravity wave salvo (3 rockets) and the EISCAT/SOUSY radar salvo (one rocket). In both salvos meteorological rockets, measuring temperature and winds, were also launched and the SOUSY radar, located near the launch site, measured mesospheric turbulence. Electron density irregularities and strong gradients were measured by the rocket probes in the region of most intense backscatter observed by the radar. The electron density profiles (8 to 4 on ascent and 4 on descent) show very different characteristics in the peak scattering region and show marked spatial and temporal variability. These data are intercompared and discussed.

  5. The scholarly rebellion of the early Baker Street Irregulars

    Directory of Open Access Journals (Sweden)

    George Mills

    2017-03-01

    Full Text Available This work provides and analyzes an early institutional history of the pioneering Sherlock Holmes American fan club, the Baker Street Irregulars (BSI. Using the publications and records of these devoted Sherlockians, I track the BSI's development from a speakeasy gathering in 1934 to a national organization by the mid-1940s. This growth was built on a foundation of Victorian nostalgia and playful humor. Yet at the same time the members of the Irregulars took their fandom seriously, producing Sherlockian scholarship and creating an infrastructure of journals, conferences, and credentialing that directly mimicked the academy. They positioned themselves in contrast to prevailing scholarly practices of the period, such as New Criticism. I trace both how their fan practices developed over time and how this conflict with the academy led to many of the BSI's defining characteristics.

  6. Constructing C1 Continuous Surface on Irregular Quad Meshes

    Institute of Scientific and Technical Information of China (English)

    HE Jun; GUO Qiang

    2013-01-01

    A new method is proposed for surface construction on irregular quad meshes as extensions to uniform B-spline surfaces. Given a number of control points, which form a regular or irregular quad mesh, a weight function is constructed for each control point. The weight function is defined on a local domain and is C1 continuous. Then the whole surface is constructed by the weighted combination of all the control points. The property of the new method is that the surface is defined by piecewise C1 bi-cubic rational parametric polynomial with each quad face. It is an extension to uniform B-spline surfaces in the sense that its definition is an analogy of the B-spline surface, and it produces a uniform bi-cubic B-spline surface if the control mesh is a regular quad mesh. Examples produced by the new method are also included.

  7. Conflict Without Casualties: Non-Lethal Weapons in Irregular Warfare

    Science.gov (United States)

    2007-09-01

    the body,” and the Geneva Protocol of 1925, bans the use of chemical and biological weapons .11 On 8 April 1975, President Ford issued Executive...E Funding – PE 63851M) (accessed 15 December 2006). The American Journal of Bioethics . “Medical Ethics and Non-Lethal Weapons .” Bioethics.net...CASUALTIES: NON-LETHAL WEAPONS IN IRREGULAR WARFARE by Richard L. Scott September 2007 Thesis Advisor: Robert McNab Second Reader

  8. Active Absorption of Irregular Gravity Waves in BEM-Models

    DEFF Research Database (Denmark)

    Brorsen, Michael; Frigaard, Peter

    1992-01-01

    The boundary element method is applied to the computation of irregular gravity waves. The boundary conditions at the open boundaries are obtained by a digital filtering technique, where the surface elevations in front of the open boundary are filtered numerically yielding the velocity to be presc...... to be prescribed at the boundary. By numerical examples it is shown that well designed filters can reduce the wave reflection to a few per cent over a frequency range corresponding to a Jonswap spectrum....

  9. Using Little's Irregularity Index in orthodontics: outdated and inaccurate?

    LENUS (Irish Health Repository)

    Macauley, Donal

    2012-12-01

    Little\\'s Irregularity Index (LII) was devised to objectively score mandibular incisor alignment for epidemiological studies but has been extended to assess the relative performance of orthodontic brackets, retainer or treatment modalities. Our aim was to examine the repeatability and precision of LII measurements of four independent examiners on the maxillary arch of orthodontic patients. The hypothesis was that the reproducibility of individual contact point displacement measurements, used to calculate the LII score, are inappropriate.

  10. Computing Homology Group Generators of Images Using Irregular Graph Pyramids

    OpenAIRE

    Peltier , Samuel; Ion , Adrian; Haxhimusa , Yll; Kropatsch , Walter; Damiand , Guillaume

    2007-01-01

    International audience; We introduce a method for computing homology groups and their generators of a 2D image, using a hierarchical structure i.e. irregular graph pyramid. Starting from an image, a hierarchy of the image is built, by two operations that preserve homology of each region. Instead of computing homology generators in the base where the number of entities (cells) is large, we first reduce the number of cells by a graph pyramid. Then homology generators are computed efficiently on...

  11. Analysis of irregular opacities of silicosis using computed tomography

    International Nuclear Information System (INIS)

    Maeda, Atsushi; Shida, Hisao; Chiyotani, Keizo; Saito, Kenichi; Mishina, Michihito

    1983-01-01

    Classification in used to codify Chest CT images of abnormalities of the lung in a simple reproducible manner. Simbols to record CT features of importance are listed. We applied CT to 92 cases of silicosis and roentgenological analysis was performed. Bullae, honeycombing, cavity, emphysema, pleural thickning and calcification were more clearly demonstrated in CT images than routine chest roentgenograms. Irregular opacities were considered to be a combined profusion of small round and streak or strand. (author)

  12. Evaluation of irregular menses in perimenarcheal girls: a pilot study.

    Science.gov (United States)

    Browner-Elhanan, Karen J; Epstein, Jonathan; Alderman, Elizabeth M

    2003-12-01

    Acyclic vaginal bleeding in girls within three years of menarche is most commonly attributed to an immature hypothalamic-pituitary-ovarian axis. Assuming this diagnosis may preclude the practitioner from performing more definitive studies and thereby diagnosing other, treatable causes of menstrual irregularities. A retrospective chart review of 178 girls presenting to an inner-city hospital-based adolescent clinic within three years of menarche was performed. Personal and family medical and menarcheal history was assessed, and findings on physical and laboratory examination performed were evaluated. Of the 178 girls still perimenarcheal at presentation, 47 were the focus of this study. Of these, 39 had no significant findings on physical examination, while 3 had signs of functional ovarian hyperandrogenism (FOH) including obesity, hirsutism, and moderate acne with corresponding LH/FSH ratios>3, although pelvic ultrasound examination revealed normal ovaries. Four of the 39 patients with normal physical exams had LH/FSH testing done, and 1 of the 4 had an abnormal LH/FSH ratio, indicating possible FOH. Two of the 47 patients were pregnant. Other laboratory abnormalities included microcytic, hypochromic anemia in patients, and an elevated Erythrocyte Sedimentation Rate in a patient later diagnosed with a rheumatologic disorder. Those perimenarcheal girls presenting with irregular menses and findings including obesity, acne, or pallor, were likely to have treatable causes of menstrual irregularities. In one of the four girls with a normal physical examination, hormonal testing indicated possible FOH, thus suggesting that hormonal evaluation of perimenarcheal girls with menstrual irregularities may be justified, as it may reveal previously unsuspected pathology.

  13. Backscatter measurements of 11-cm equatorial spread-F irregularities

    International Nuclear Information System (INIS)

    Tsunoda, R.T.

    1980-01-01

    In the equatorial F-region ionosphere, a turbulent cascade process has been found to exist that extends from irregularity spatial wavelengths longer than tens of kilometers down to wavelengths as short as 36 cm. To investigate the small-scale regime of wavelengths less than 36 cm, an equatorial radar experiment was conducted using a frequency of 1320 MHz that corresponds to an irregularity wavelength of 11 cm. The first observations of radar backscatter from 11-cm field-aligned irregularities (FAI) are described. These measurements extend the spatial wavelength regime of F-region FAI to lengths that approach both electron gyroradius and the Debye length. Agreement of these results with the theory of high-frequency drift waves suggests that these observations may be unique to the equatorial ionosphere. That is, the requirement of low electron densities for which the theroy calls may preclude the existence of 11-cm FAI elsewhere in the F-region ionosphere, except in equatorial plasma bubbles

  14. [Comparision of Different Methods of Area Measurement in Irregular Scar].

    Science.gov (United States)

    Ran, D; Li, W J; Sun, Q G; Li, J Q; Xia, Q

    2016-10-01

    To determine a measurement standard of irregular scar area by comparing the advantages and disadvantages of different measurement methods in measuring same irregular scar area. Irregular scar area was scanned by digital scanning and measured by coordinate reading method, AutoCAD pixel method, Photoshop lasso pixel method, Photoshop magic bar filled pixel method and Foxit PDF reading software, and some aspects of these methods such as measurement time, repeatability, whether could be recorded and whether could be traced were compared and analyzed. There was no significant difference in the scar areas by the measurement methods above. However, there was statistical difference in the measurement time and repeatability by one or multi performers and only Foxit PDF reading software could be traced back. The methods above can be used for measuring scar area, but each one has its advantages and disadvantages. It is necessary to develop new measurement software for forensic identification. Copyright© by the Editorial Department of Journal of Forensic Medicine

  15. Seismic performance for vertical geometric irregularity frame structures

    Science.gov (United States)

    Ismail, R.; Mahmud, N. A.; Ishak, I. S.

    2018-04-01

    This research highlights the result of vertical geometric irregularity frame structures. The aid of finite element analysis software, LUSAS was used to analyse seismic performance by focusing particularly on type of irregular frame on the differences in height floors and continued in the middle of the building. Malaysia’s building structures were affected once the earthquake took place in the neighbouring country such as Indonesia (Sumatera Island). In Malaysia, concrete is widely used in building construction and limited tension resistance to prevent it. Analysing structural behavior with horizontal and vertical static load is commonly analyses by using the Plane Frame Analysis. The case study of this research is to determine the stress and displacement in the seismic response under this type of irregular frame structures. This study is based on seven-storey building of Clinical Training Centre located in Sungai Buloh, Selayang, Selangor. Since the largest earthquake occurs in Acheh, Indonesia on December 26, 2004, the data was recorded and used in conducting this research. The result of stress and displacement using IMPlus seismic analysis in LUSAS Modeller Software under the seismic response of a formwork frame system states that the building is safe to withstand the ground and in good condition under the variation of seismic performance.

  16. Reference: 21 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ication of a number of mutant lines with altered Chl fluorescence characteristics. Analysis of photosynthesis...cation of mutants of Arabidopsis defective in acclimation of photosynthesis to th

  17. Reference: 789 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ylakoid membranes. Microarray analysis of the chl27-t mutant showed repression of numerous nuclear genes involved in photosynthesis...d CHL27 proteins. Role of Arabidopsis CHL27 protein for photosynthesis, chloroplast development and gene exp

  18. Reference: 306 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available of the endoreduplication cycle in Arabidopsis requires a plant homologue of archaeal DNA topoisomerase (topo) VI. To further understa...nd how DNA is endoreduplicated and how this process is r

  19. Reference: 150 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ridization, Pht1;4 was found mainly expressed in inorgan...physiological characterization of Arabidopsis pht1;4 high affinity phosphate transporter mutants. Using GUS-gene trap and in situ hyb

  20. Arabidopsis CDS blastp result: AK099152 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK099152 J023070H02 At4g01900.1 P II nitrogen sensing protein (GLB I) identical to P II nitrogen... sensing protein GLB I (GI:7268574) [Arabidopsis thaliana]; similar to nitrogen regulatory prot

  1. Arabidopsis CDS blastp result: AK068407 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK068407 J013149B08 At4g01900.1 P II nitrogen sensing protein (GLB I) identical to P II nitrogen... sensing protein GLB I (GI:7268574) [Arabidopsis thaliana]; similar to nitrogen regulatory prot

  2. Arabidopsis CDS blastp result: AK241043 [KOME

    Lifescience Database Archive (English)

    Full Text Available upted by a stop codon, creating non-consensus donor and acceptor splice sites. 2e-41 ... ...tical to SP|P92997 Germin-like protein subfamily 1 member 13 precursor {Arabidopsis thaliana}; exon 2 interr

  3. Arabidopsis CDS blastp result: AK243135 [KOME

    Lifescience Database Archive (English)

    Full Text Available upted by a stop codon, creating non-consensus donor and acceptor splice sites. 7e-43 ... ...tical to SP|P92997 Germin-like protein subfamily 1 member 13 precursor {Arabidopsis thaliana}; exon 2 interr

  4. Reference: 346 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available th a function in purine turnover in Arabidopsis. To our knowledge this is the fir...ock in allantoate catabolism. AtAAH transcript was detected in all tissues examined by RT-PCR, consistent wi

  5. Reference: 510 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available in support of PSII activity, whereas the interaction of PsbO2 with PSII regulates the turnover... its degradation. The Arabidopsis PsbO2 protein regulates dephosphorylation and turnover of the photosystem

  6. Reference: 278 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available functional ERA1 gene, which encodes the beta-subunit of protein farnesyltransferase (PFT), exhibit pleiotropic effects...gnaling and meristem development. Here, we report the effects of T-DNA insertion mutations in the Arabidopsi

  7. Arabidopsis CDS blastp result: AK287673 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK287673 J065121E18 At4g37750.1 68417.m05344 ovule development protein aintegumenta... (ANT) identical to ovule development protein aintegumenta (ANT) (GI:1244708) ) [Arabidopsis thaliana] 6e-17 ...

  8. Arabidopsis CDS blastp result: AK241272 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK241272 J065132I19 At4g37750.1 68417.m05344 ovule development protein aintegumenta... (ANT) identical to ovule development protein aintegumenta (ANT) (GI:1244708) ) [Arabidopsis thaliana] 1e-88 ...

  9. Arabidopsis CDS blastp result: AK241712 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK241712 J065197H24 At4g37750.1 68417.m05344 ovule development protein aintegumenta... (ANT) identical to ovule development protein aintegumenta (ANT) (GI:1244708) ) [Arabidopsis thaliana] 6e-27 ...

  10. Arabidopsis CDS blastp result: AK106306 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK106306 002-101-C10 At4g37750.1 ovule development protein aintegumenta (ANT) ident...ical to ovule development protein aintegumenta (ANT) (GI:1244708) ) [Arabidopsis thaliana] 3e-89 ...

  11. Arabidopsis CDS blastp result: AK287726 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK287726 J065138E17 At4g37750.1 68417.m05344 ovule development protein aintegumenta... (ANT) identical to ovule development protein aintegumenta (ANT) (GI:1244708) ) [Arabidopsis thaliana] 1e-88 ...

  12. Arabidopsis CDS blastp result: AK109848 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK109848 002-148-F05 At4g37750.1 ovule development protein aintegumenta (ANT) ident...ical to ovule development protein aintegumenta (ANT) (GI:1244708) ) [Arabidopsis thaliana] 5e-73 ...

  13. Arabidopsis CDS blastp result: AK242387 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242387 J080051E14 At4g37750.1 68417.m05344 ovule development protein aintegumenta... (ANT) identical to ovule development protein aintegumenta (ANT) (GI:1244708) ) [Arabidopsis thaliana] 2e-45 ...

  14. Arabidopsis CDS blastp result: AK240892 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK240892 J065030K10 At4g37750.1 68417.m05344 ovule development protein aintegumenta... (ANT) identical to ovule development protein aintegumenta (ANT) (GI:1244708) ) [Arabidopsis thaliana] 5e-88 ...

  15. Arabidopsis CDS blastp result: AK242957 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242957 J090089I15 At4g37750.1 68417.m05344 ovule development protein aintegumenta... (ANT) identical to ovule development protein aintegumenta (ANT) (GI:1244708) ) [Arabidopsis thaliana] 1e-28 ...

  16. Arabidopsis CDS blastp result: AK287621 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK287621 J065066I09 At4g37750.1 68417.m05344 ovule development protein aintegumenta... (ANT) identical to ovule development protein aintegumenta (ANT) (GI:1244708) ) [Arabidopsis thaliana] 5e-85 ...

  17. Reference: 627 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available omal processing protease (GPP) from the fat-storing cotyledons of watermelon (Citrullus vulgaris) by column ...ptidase, and a Lon-protease. Specific antibodies against the peroxisomal Deg-protease from Arabidopsis (Deg15) identify the watermelo

  18. Arabidopsis CDS blastp result: AK242585 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242585 J090010M20 At3g03050.1 68416.m00301 cellulose synthase family protein (CslD3) similar to cellulose... synthase catalytic subunit gi:2827143 from [Arabidopsis thaliana], cellulose syntha

  19. Arabidopsis CDS blastp result: AK242601 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242601 J090014G03 At3g03050.1 68416.m00301 cellulose synthase family protein (CslD3) similar to cellulose... synthase catalytic subunit gi:2827143 from [Arabidopsis thaliana], cellulose syntha

  20. Arabidopsis CDS blastp result: AK110467 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK110467 002-166-G08 At3g03050.1 cellulose synthase family protein (CslD3) similar to cellulose... synthase catalytic subunit gi:2827143 from [Arabidopsis thaliana], cellulose synthase-7 (gi:962

  1. Arabidopsis CDS blastp result: AK066835 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK066835 J013087I16 At5g16910.1 cellulose synthase family protein similar to gi:2827143 cellulose... synthase catalytic subunit, Arabidopsis thaliana, gi:9622886 cellulose synthase-7 from Zea mays 1e-171 ...

  2. Arabidopsis CDS blastp result: AK102695 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK102695 J033103F21 At5g16910.1 cellulose synthase family protein similar to gi:2827143 cellulose... synthase catalytic subunit, Arabidopsis thaliana, gi:9622886 cellulose synthase-7 from Zea mays 0.0 ...

  3. Arabidopsis CDS blastp result: AK242890 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242890 J090079L19 At3g03050.1 68416.m00301 cellulose synthase family protein (CslD3) similar to cellulose... synthase catalytic subunit gi:2827143 from [Arabidopsis thaliana], cellulose syntha

  4. Arabidopsis CDS blastp result: AK100523 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK100523 J023100P04 At5g16910.1 cellulose synthase family protein similar to gi:2827143 cellulose... synthase catalytic subunit, Arabidopsis thaliana, gi:9622886 cellulose synthase-7 from Zea mays 0.0 ...

  5. Arabidopsis CDS blastp result: AK065259 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK065259 J013002J18 At5g16910.1 cellulose synthase family protein similar to gi:2827143 cellulose... synthase catalytic subunit, Arabidopsis thaliana, gi:9622886 cellulose synthase-7 from Zea mays 0.0 ...

  6. Arabidopsis CDS blastp result: AK102134 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK102134 J033085F12 At5g16910.1 cellulose synthase family protein similar to gi:2827143 cellulose... synthase catalytic subunit, Arabidopsis thaliana, gi:9622886 cellulose synthase-7 from Zea mays 0.0 ...

  7. The fifth international conference on Arabidopsis research

    Energy Technology Data Exchange (ETDEWEB)

    Hangarter, R.; Scholl, R.; Davis, K.; Feldmann, K.

    1993-12-31

    This volume contains abstracts of oral and poster presentations made in conjunction with the Fifth International Conference on Arabidopsis Research held August 19--22, 1993 at the Ohio State University, Columbus, Ohio.

  8. Irregular analytical errors in diagnostic testing - a novel concept.

    Science.gov (United States)

    Vogeser, Michael; Seger, Christoph

    2018-02-23

    In laboratory medicine, routine periodic analyses for internal and external quality control measurements interpreted by statistical methods are mandatory for batch clearance. Data analysis of these process-oriented measurements allows for insight into random analytical variation and systematic calibration bias over time. However, in such a setting, any individual sample is not under individual quality control. The quality control measurements act only at the batch level. Quantitative or qualitative data derived for many effects and interferences associated with an individual diagnostic sample can compromise any analyte. It is obvious that a process for a quality-control-sample-based approach of quality assurance is not sensitive to such errors. To address the potential causes and nature of such analytical interference in individual samples more systematically, we suggest the introduction of a new term called the irregular (individual) analytical error. Practically, this term can be applied in any analytical assay that is traceable to a reference measurement system. For an individual sample an irregular analytical error is defined as an inaccuracy (which is the deviation from a reference measurement procedure result) of a test result that is so high it cannot be explained by measurement uncertainty of the utilized routine assay operating within the accepted limitations of the associated process quality control measurements. The deviation can be defined as the linear combination of the process measurement uncertainty and the method bias for the reference measurement system. Such errors should be coined irregular analytical errors of the individual sample. The measurement result is compromised either by an irregular effect associated with the individual composition (matrix) of the sample or an individual single sample associated processing error in the analytical process. Currently, the availability of reference measurement procedures is still highly limited, but LC

  9. Stromal haze, myofibroblasts, and surface irregularity after PRK.

    Science.gov (United States)

    Netto, Marcelo V; Mohan, Rajiv R; Sinha, Sunilima; Sharma, Ajay; Dupps, William; Wilson, Steven E

    2006-05-01

    The aim of this study was to investigate the relationship between the level of stromal surface irregularity after photorefractive keratectomy (PRK) and myofibroblast generation along with the development of corneal haze. Variable levels of stromal surface irregularity were generated in rabbit corneas by positioning a fine mesh screen in the path of excimer laser during ablation for a variable percentage of the terminal pulses of the treatment for myopia that does not otherwise generate significant opacity. Ninety-six rabbits were divided into eight groups: [see table in text]. Slit lamp analysis and haze grading were performed in all groups. Rabbits were sacrificed at 4 hr or 4 weeks after surgery and histochemical analysis was performed on corneas for apoptosis (TUNEL assay), myofibroblast marker alpha-smooth muscle actin (SMA), and integrin alpha4 to delineate the epithelial basement membrane. Slit-lamp grading revealed severe haze formation in corneas in groups IV and VI, with significantly less haze in groups II, III, and VII and insignificant haze compared with the unwounded control in groups I and V. Analysis of SMA staining at 4 weeks after surgery, the approximate peak of haze formation in rabbits, revealed low myofibroblast formation in group I (1.2+/-0.2 cells/400x field) and group V (1.8+/-0.4), with significantly more in groups II (3.5+/-1.8), III (6.8+/-1.6), VII (7.9+/-3.8), IV (12.4+/-4.2) and VI (14.6+/-5.1). The screened groups were significantly different from each other (p PRK groups. The -9.0 diopter PRK group VI had significantly more myofibroblast generation than the -9.0 diopter PRK with PTK-smoothing group VII (p PRK and the level of stromal surface irregularity. PTK-smoothing with methylcellulose was an effective method to reduce stromal surface irregularity and decreased both haze and associated myofibroblast density. We hypothesize that stromal surface irregularity after PRK for high myopia results in defective basement membrane

  10. Reference: 398 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available modulate the photosynthetic potential of plant cells. Identification of genes required for light-induced chloroplast movement... is beginning to define the molecular machinery that controls these movement...s. In this work, we describe plastid movement impaired 2 (pmi2), a mutant in Arabidopsis (Arabi...dopsis thaliana) that displays attenuated chloroplast movements under intermediate and high light intensitie...s while maintaining a normal movement response under low light intensities. In wi

  11. Reference: 170 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available rice A et al. 2005 Mar. Plant Cell 17(3):791-803. Environmental time cues, such as photocycles (light/dark) and thermocycles...h is known about entrainment of the Arabidopsis thaliana clock to photocycles, th...e determinants of thermoperception and entrainment to thermocycles are not known. The Arabidopsis PSEUDO-RES... an oscillation after entrainment to thermocycles and to reset its clock in response to cold pulses and thus

  12. Women with minor menstrual irregularities have increased risk of preeclampsia and low birthweight in spontaneous pregnancies

    DEFF Research Database (Denmark)

    Bonnesen, Barbara; Oddgeirsdóttir, Hanna L; Naver, Klara Vinsand

    2016-01-01

    INTRODUCTION: Very few studies describe the obstetric and neonatal outcome of spontaneous pregnancies in women with irregular menstrual cycles. However, menstrual cycle irregularities are common and may be associated with increased risk, and women who develop pregnancy complications more frequent...

  13. Study of Track Irregularity Time Series Calibration and Variation Pattern at Unit Section

    Directory of Open Access Journals (Sweden)

    Chaolong Jia

    2014-01-01

    Full Text Available Focusing on problems existing in track irregularity time series data quality, this paper first presents abnormal data identification, data offset correction algorithm, local outlier data identification, and noise cancellation algorithms. And then proposes track irregularity time series decomposition and reconstruction through the wavelet decomposition and reconstruction approach. Finally, the patterns and features of track irregularity standard deviation data sequence in unit sections are studied, and the changing trend of track irregularity time series is discovered and described.

  14. Intracellular localization of Arabidopsis sulfurtransferases.

    Science.gov (United States)

    Bauer, Michael; Dietrich, Christof; Nowak, Katharina; Sierralta, Walter D; Papenbrock, Jutta

    2004-06-01

    Sulfurtransferases (Str) comprise a group of enzymes widely distributed in archaea, eubacteria, and eukaryota which catalyze the transfer of a sulfur atom from suitable sulfur donors to nucleophilic sulfur acceptors. In all organisms analyzed to date, small gene families encoding Str proteins have been identified. The gene products were localized to different compartments of the cells. Our interest concerns the localization of Str proteins encoded in the nuclear genome of Arabidopsis. Computer-based prediction methods revealed localization in different compartments of the cell for six putative AtStrs. Several methods were used to determine the localization of the AtStr proteins experimentally. For AtStr1, a mitochondrial localization was demonstrated by immunodetection in the proteome of isolated mitochondria resolved by one- and two-dimensional gel electrophoresis and subsequent blotting. The respective mature AtStr1 protein was identified by mass spectrometry sequencing. The same result was obtained by transient expression of fusion constructs with the green fluorescent protein in Arabidopsis protoplasts, whereas AtStr2 was exclusively localized to the cytoplasm by this method. Three members of the single-domain AtStr were localized in the chloroplasts as demonstrated by transient expression of green fluorescent protein fusions in protoplasts and stomata, whereas the single-domain AtStr18 was shown to be cytoplasmic. The remarkable subcellular distribution of AtStr15 was additionally analyzed by transmission electron immunomicroscopy using a monospecific antibody against green fluorescent protein, indicating an attachment to the thylakoid membrane. The knowledge of the intracellular localization of the members of this multiprotein family will help elucidate their specific functions in the organism.

  15. Kilometer-Spaced GNSS Array for Ionospheric Irregularity Monitoring

    Science.gov (United States)

    Su, Yang

    This dissertation presents automated, systematic data collection, processing, and analysis methods for studying the spatial-temporal properties of Global Navigation Satellite Systems (GNSS) scintillations produced by ionospheric irregularities at high latitudes using a closely spaced multi-receiver array deployed in the northern auroral zone. The main contributions include 1) automated scintillation monitoring, 2) estimation of drift and anisotropy of the irregularities, 3) error analysis of the drift estimates, and 4) multi-instrument study of the ionosphere. A radio wave propagating through the ionosphere, consisting of ionized plasma, may suffer from rapid signal amplitude and/or phase fluctuations known as scintillation. Caused by non-uniform structures in the ionosphere, intense scintillation can lead to GNSS navigation and high-frequency (HF) communication failures. With specialized GNSS receivers, scintillation can be studied to better understand the structure and dynamics of the ionospheric irregularities, which can be parameterized by altitude, drift motion, anisotropy of the shape, horizontal spatial extent and their time evolution. To study the structuring and motion of ionospheric irregularities at the sub-kilometer scale sizes that produce L-band scintillations, a closely-spaced GNSS array has been established in the auroral zone at Poker Flat Research Range, Alaska to investigate high latitude scintillation and irregularities. Routinely collecting low-rate scintillation statistics, the array database also provides 100 Hz power and phase data for each channel at L1/L2C frequency. In this work, a survey of seasonal and hourly dependence of L1 scintillation events over the course of a year is discussed. To efficiently and systematically study scintillation events, an automated low-rate scintillation detection routine is established and performed for each day by screening the phase scintillation index. The spaced-receiver technique is applied to cross

  16. Similarity estimators for irregular and age uncertain time series

    Science.gov (United States)

    Rehfeld, K.; Kurths, J.

    2013-09-01

    Paleoclimate time series are often irregularly sampled and age uncertain, which is an important technical challenge to overcome for successful reconstruction of past climate variability and dynamics. Visual comparison and interpolation-based linear correlation approaches have been used to infer dependencies from such proxy time series. While the first is subjective, not measurable and not suitable for the comparison of many datasets at a time, the latter introduces interpolation bias, and both face difficulties if the underlying dependencies are nonlinear. In this paper we investigate similarity estimators that could be suitable for the quantitative investigation of dependencies in irregular and age uncertain time series. We compare the Gaussian-kernel based cross correlation (gXCF, Rehfeld et al., 2011) and mutual information (gMI, Rehfeld et al., 2013) against their interpolation-based counterparts and the new event synchronization function (ESF). We test the efficiency of the methods in estimating coupling strength and coupling lag numerically, using ensembles of synthetic stalagmites with short, autocorrelated, linear and nonlinearly coupled proxy time series, and in the application to real stalagmite time series. In the linear test case coupling strength increases are identified consistently for all estimators, while in the nonlinear test case the correlation-based approaches fail. The lag at which the time series are coupled is identified correctly as the maximum of the similarity functions in around 60-55% (in the linear case) to 53-42% (for the nonlinear processes) of the cases when the dating of the synthetic stalagmite is perfectly precise. If the age uncertainty increases beyond 5% of the time series length, however, the true coupling lag is not identified more often than the others for which the similarity function was estimated. Age uncertainty contributes up to half of the uncertainty in the similarity estimation process. Time series irregularity

  17. Similarity estimators for irregular and age-uncertain time series

    Science.gov (United States)

    Rehfeld, K.; Kurths, J.

    2014-01-01

    Paleoclimate time series are often irregularly sampled and age uncertain, which is an important technical challenge to overcome for successful reconstruction of past climate variability and dynamics. Visual comparison and interpolation-based linear correlation approaches have been used to infer dependencies from such proxy time series. While the first is subjective, not measurable and not suitable for the comparison of many data sets at a time, the latter introduces interpolation bias, and both face difficulties if the underlying dependencies are nonlinear. In this paper we investigate similarity estimators that could be suitable for the quantitative investigation of dependencies in irregular and age-uncertain time series. We compare the Gaussian-kernel-based cross-correlation (gXCF, Rehfeld et al., 2011) and mutual information (gMI, Rehfeld et al., 2013) against their interpolation-based counterparts and the new event synchronization function (ESF). We test the efficiency of the methods in estimating coupling strength and coupling lag numerically, using ensembles of synthetic stalagmites with short, autocorrelated, linear and nonlinearly coupled proxy time series, and in the application to real stalagmite time series. In the linear test case, coupling strength increases are identified consistently for all estimators, while in the nonlinear test case the correlation-based approaches fail. The lag at which the time series are coupled is identified correctly as the maximum of the similarity functions in around 60-55% (in the linear case) to 53-42% (for the nonlinear processes) of the cases when the dating of the synthetic stalagmite is perfectly precise. If the age uncertainty increases beyond 5% of the time series length, however, the true coupling lag is not identified more often than the others for which the similarity function was estimated. Age uncertainty contributes up to half of the uncertainty in the similarity estimation process. Time series irregularity

  18. Ionospheric wave and irregularity measurements using passive radio astronomy techniques

    International Nuclear Information System (INIS)

    Erickson, W.C.; Mahoney, M.J.; Jacobson, A.R.; Knowles, S.H.

    1988-01-01

    The observation of midlatitude structures using passive radio astronomy techniques is discussed, with particular attention being given to the low-frequency radio telescope at the Clark Lake Radio Observatory. The present telescope operates in the 10-125-MHz frequency range. Observations of the ionosphere at separations of a few kilometers to a few hundreds of kilometers by the lines of sight to sources are possible, allowing the determination of the amplitude, wavelength, direction of propagation, and propagation speed of ionospheric waves. Data are considered on large-scale ionospheric gradients and the two-dimensional shapes and sizes of ionospheric irregularities. 10 references

  19. Analysis of an Irregular RC Multi-storeyed Building Subjected to Dynamic Loading

    Science.gov (United States)

    AkashRaut; Pachpor, Prabodh; Dautkhani, Sanket

    2018-03-01

    Many buildings in the present scenario have irregular configurations both in plan and elevation. This in future may subject to devastating earthquakes. So it is necessary to analyze the structure. The present paper is made to study three type of irregularity wiz vertical, mass and plan irregularity as per clause 7.1 of IS 1893 (part1)2002 code. The paper discusses the analysis of RC (Reinforced Concrete) Buildings with vertical irregularity. The study as a whole makes an effort to evaluate the effect of vertical irregularity on RC buildings for which comparison of three parameters namely shear force, bending moment and deflection are taken into account.

  20. The Biosynthetic Origin of Irregular Monoterpenes in Lavandula

    Science.gov (United States)

    Demissie, Zerihun A.; Erland, Lauren A. E.; Rheault, Mark R.; Mahmoud, Soheil S.

    2013-01-01

    Lavender essential oils are constituted predominantly of regular monoterpenes, for example linalool, 1,8-cineole, and camphor. However, they also contain irregular monoterpenes including lavandulol and lavandulyl acetate. Although the majority of genes responsible for the production of regular monoterpenes in lavenders are now known, enzymes (including lavandulyl diphosphate synthase (LPPS)) catalyzing the biosynthesis of irregular monoterpenes in these plants have not been described. Here, we report the isolation and functional characterization of a novel cis-prenyl diphosphate synthase cDNA, termed Lavandula x intermedia lavandulyl diphosphate synthase (LiLPPS), through a homology-based cloning strategy. The LiLPPS ORF, encoding for a 305-amino acid long protein, was expressed in Escherichia coli, and the recombinant protein was purified by nickel-nitrilotriacetic acid affinity chromatography. The approximately 34.5-kDa bacterially produced protein specifically catalyzed the head-to-middle condensation of two dimethylallyl diphosphate units to LPP in vitro with apparent Km and kcat values of 208 ± 12 μm and 0.1 s−1, respectively. LiLPPS is a homodimeric enzyme with a sigmoidal saturation curve and Hill coefficient of 2.7, suggesting a positive co-operative interaction among its catalytic sites. LiLPPS could be used to modulate the production of lavandulol and its derivatives in plants through metabolic engineering. PMID:23306202

  1. Size and Albedo of Irregular Saturnian Satellites from Spitzer Observations

    Science.gov (United States)

    Mueller, Michael; Grav, T.; Trilling, D.; Stansberry, J.; Sykes, M.

    2008-09-01

    Using MIPS onboard the Spitzer Space Telescope, we observed the thermal emission (24 and, for some targets, 70 um) of eight irregular satellites of Saturn: Albiorix, Siarnaq, Paaliaq, Kiviuq, Ijiraq, Tarvos, Erriapus, and Ymir. We determined the size and albedo of all targets. An analysis of archived MIPS observations of Phoebe reproduces Cassini results very accurately, thereby validating our method. For all targets, the geometric albedo is found to be low, probably below 10% and clearly below 15%. Irregular satellites are much darker than the large regular satellites. Their albedo is, however, quite similar to that of small bodies in the outer Solar System (such as cometary nuclei, Jupiter Trojans, or TNOs). This is consistent with color measurements as well as dynamical considerations which suggest a common origin of the said populations. There appear to be significant object-to-object albedo differences. Similar albedos found for some members of dynamical clusters support the idea that they may have originated in the breakup of a parent body. For three satellites, thermal data at two wavelengths are available, enabling us to constrain their thermal properties. Sub-solar temperatures are similar to that found from Cassini's Phoebe fly-by. This suggests a rather low thermal inertia, as expected for regolith-covered objects. This work is based on observations made with the Spitzer Space Telescope, which is operated by JPL under a contract with NASA. Support for this work was provided by NASA.

  2. Non-storm irregular variation of the Dst index

    Directory of Open Access Journals (Sweden)

    S. Nakano

    2012-01-01

    Full Text Available The Dst index has a long-term variation that is not associated with magnetic storms. We estimated the long-term non-storm component of the Dst variation by removing the short-term variation related to magnetic storms. The results indicate that the variation of the non-storm component includes not only a seasonal variation but also an irregular variation. The irregular long-term variation is likely to be due to an anti-correlation with the long-term variation of solar-wind activity. In particular, a clear anti-correlation is observed between the non-storm component of Dst and the long-term variation of the solar-wind dynamic pressure. This means that in the long term, the Dst index tends to increase when the solar-wind dynamic pressure decreases. We interpret this anti-correlation as an indication that the long-term non-storm variation of Dst is influenced by the tail current variation. The long-term variation of the solar-wind dynamic pressure controls the plasma sheet thermal pressure, and the change of the plasma sheet thermal pressure would cause the non-storm tail current variation, resulting in the non-storm variation of Dst.

  3. Irregular working hours and fatigue of cabin crew.

    Science.gov (United States)

    Castro, Marta; Carvalhais, José; Teles, Júlia

    2015-01-01

    Beyond workload and specific environmental factors, flight attendants can be exposed to irregular working hours, conflicting with their circadian rhythms and having a negative impact in sleep, fatigue, health, social and family life, and performance which is critical to both safety and security in flight operations. This study focuses on the irregular schedules of cabin crew as a trigger of fatigue symptoms in a wet lease Portuguese airline. The aim was to analyze: what are the requirements of the cabin crew work; whether the schedules being observed and effective resting timeouts are triggering factors of fatigue; and the existence of fatigue symptoms in the cabin crew. A questionnaire has been adapted and applied to a sample of 73 cabin crew-members (representing 61.9% of the population), 39 females and 34 males, with an average age of 27.68 ± 4.27 years. Our data indicate the presence of fatigue and corresponding health symptoms among the airline cabin crew, despite of the sample favorable characteristics. Senior workers and women are more affected. Countermeasures are required. Recommendations can be made regarding the fatigue risk management, including work organization, education and awareness training programmes and specific countermeasures.

  4. Model tracking dual stochastic controller design under irregular internal noises

    International Nuclear Information System (INIS)

    Lee, Jong Bok; Heo, Hoon; Cho, Yun Hyun; Ji, Tae Young

    2006-01-01

    Although many methods about the control of irregular external noise have been introduced and implemented, it is still necessary to design a controller that will be more effective and efficient methods to exclude for various noises. Accumulation of errors due to model tracking, internal noises (thermal noise, shot noise and l/f noise) that come from elements such as resistor, diode and transistor etc. in the circuit system and numerical errors due to digital process often destabilize the system and reduce the system performance. New stochastic controller is adopted to remove those noises using conventional controller simultaneously. Design method of a model tracking dual controller is proposed to improve the stability of system while removing external and internal noises. In the study, design process of the model tracking dual stochastic controller is introduced that improves system performance and guarantees robustness under irregular internal noises which can be created internally. The model tracking dual stochastic controller utilizing F-P-K stochastic control technique developed earlier is implemented to reveal its performance via simulation

  5. Using Radio Irregularity for Increasing Residential Energy Awareness

    Directory of Open Access Journals (Sweden)

    A. Miljković

    2012-06-01

    Full Text Available Radio irregularity phenomenon is often considered as a shortcoming of wireless networks. In this paper, the method of using radio irregularity as an efficient human presence detection sensor in smart homes is presented. The method is mainly based on monitoring variations of the received signal strength indicator (RSSI within the messages used for the communication between wireless smart power outlets. The radio signals used for the inter-outlets communication can be absorbed, diffracted or reflected by objects in their propagation paths. When a human enters the existing radio communication field, the variation of the signal strength at the receiver is even more expressed. Based on the detected changes and compared to the initial thresholds set during the initialization phase, the system detects human presence. The proposed solution increases user awareness and automates the power control in households, with the primary goal to contribute in residential energy savings. Compared to conventional sensor networks, this approach preserves the sensorial intelligence, simplicity and low installation costs, without the need for additional sensors integration.

  6. Colombia: la guerra irregular en el fin de siglo

    Directory of Open Access Journals (Sweden)

    Alfredo RANGEL SUÁREZ

    2009-11-01

    Full Text Available RESUMEN: El artículo analiza las transformaciones de la guerra irregular de las guerrillas colombianas en las últimas décadas. Para ello, se estudian los cambios que han afectado a distintos factores, como los objetivos estratégicos, los medios financieros, militares, las relaciones que mantienen con los partidos políticos tradicionales en el nivel local, sus parámetros ideológicos, el origen social de sus miembros. Con esta perspectiva, se analiza el cálculo político/temporal que la guerrilla hace en la actual coyuntura y sus consecuencias para el proceso de paz.ABSTRACT: This article examines the transformations of the irregular war of the colombian guerrillas, studying the changes of several factors such as the strategic goals, the financial and army resources, the relationship among the political parties in the local level, the evolution of their ideological parameters and of the social origin of their members. With this perspectiva, the author analyses temporal and political calculation that the guerrilla makes at this point, and its consequences for the peace process.

  7. Nonadiabatic two-electron transfer mediated by an irregular bridge

    International Nuclear Information System (INIS)

    Petrov, E.G.; Shevchenko, Ye.V.; May, V.

    2004-01-01

    Nonadiabatic two-electron transfer (TET) mediated by a linear molecular bridge is studied theoretically. Special attention is put on the case of a irregular distribution of bridge site energies as well as on the inter-site Coulomb interaction. Based on the unified description of electron transfer reactions [J. Chem. Phys. 115 (2001) 7107] a closed set of kinetic equations describing the TET process is derived. A reduction of this set to a single exponential donor-acceptor (D-A) TET is performed together with a derivation of an overall D-A TET rate. The latter contains a contribution of the stepwise as well as of the concerted route of D-A TET. The stepwise contribution is determined by two single-electron steps each of them associated with a sequential and a superexchange pathway. A two-electron unistep superexchange transition between the D and A forms the concerted contribution to the overall rate. Both contributions are analyzed in their dependency on the bridge length. The irregular distribution of the bridge site energies as well as the influence of the Coulomb interaction facilitates the D-A TET via a modification of the stepwise and the concerted part of the overall rate. At low temperatures and for short bridges with a single or two units the concerted contribution exceeds the stepwise contribution. If the bridge contains more than two units, the stepwise contribution dominates the overall rate

  8. Designing Next Generation Massively Multithreaded Architectures for Irregular Applications

    Energy Technology Data Exchange (ETDEWEB)

    Tumeo, Antonino; Secchi, Simone; Villa, Oreste

    2012-08-31

    Irregular applications, such as data mining or graph-based computations, show unpredictable memory/network access patterns and control structures. Massively multi-threaded architectures with large node count, like the Cray XMT, have been shown to address their requirements better than commodity clusters. In this paper we present the approaches that we are currently pursuing to design future generations of these architectures. First, we introduce the Cray XMT and compare it to other multithreaded architectures. We then propose an evolution of the architecture, integrating multiple cores per node and next generation network interconnect. We advocate the use of hardware support for remote memory reference aggregation to optimize network utilization. For this evaluation we developed a highly parallel, custom simulation infrastructure for multi-threaded systems. Our simulator executes unmodified XMT binaries with very large datasets, capturing effects due to contention and hot-spotting, while predicting execution times with greater than 90% accuracy. We also discuss the FPGA prototyping approach that we are employing to study efficient support for irregular applications in next generation manycore processors.

  9. Mining the active proteome of Arabidopsis thaliana

    Directory of Open Access Journals (Sweden)

    Renier A. L. Van Der Hoorn

    2011-11-01

    Full Text Available Assigning functions to the >30.000 proteins encoded by the Arabidopsis genome is a challenging task of the Arabidopsis Functional Genomics Network. Although genome-wide technologies like proteomics and transcriptomics have generated a wealth of information that significantly accelerated gene annotation, protein activities are poorly predicted by transcript or protein levels as protein activities are post-translationally regulated. To directly display protein activities in Arabidopsis proteomes, we developed and applied Activity-based Protein Profiling (ABPP. ABPP is based on the use of small molecule probes that react with the catalytic residues of distinct protein classes in an activity-dependent manner. Labeled proteins are separated and detected from proteins gels and purified and identified by mass spectrometry. Using probes of six different chemotypes we have displayed of activities of 76 Arabidopsis proteins. These proteins represent over ten different protein classes that contain over 250 Arabidopsis proteins, including cysteine- serine- and metallo-proteases, lipases, acyltransferases, and the proteasome. We have developed methods for identification of in vivo labeled proteins using click-chemistry and for in vivo imaging with fluorescent probes. In vivo labeling has revealed novel protein activities and unexpected subcellular activities of the proteasome. Labeling of extracts displayed several differential activities e.g. of the proteasome during immune response and methylesterases during infection. These studies illustrate the power of ABPP to display the functional proteome and testify to a successful interdisciplinary collaboration involving chemical biology, organic chemistry and proteomics.

  10. Bioavailability of nanoparticulate hematite to Arabidopsis thaliana

    International Nuclear Information System (INIS)

    Marusenko, Yevgeniy; Shipp, Jessie; Hamilton, George A.; Morgan, Jennifer L.L.; Keebaugh, Michael; Hill, Hansina; Dutta, Arnab; Zhuo, Xiaoding; Upadhyay, Nabin; Hutchings, James; Herckes, Pierre; Anbar, Ariel D.; Shock, Everett; Hartnett, Hilairy E.

    2013-01-01

    The environmental effects and bioavailability of nanoparticulate iron (Fe) to plants are currently unknown. Here, plant bioavailability of synthesized hematite Fe nanoparticles was evaluated using Arabidopsis thaliana (A. thaliana) as a model. Over 56-days of growing wild-type A. thaliana, the nanoparticle-Fe and no-Fe treatments had lower plant biomass, lower chlorophyll concentrations, and lower internal Fe concentrations than the Fe-treatment. Results for the no-Fe and nanoparticle-Fe treatments were consistently similar throughout the experiment. These results suggest that nanoparticles (mean diameter 40.9 nm, range 22.3–67.0 nm) were not taken up and therefore not bioavailable to A. thaliana. Over 14-days growing wild-type and transgenic (Type I/II proton pump overexpression) A. thaliana, the Type I plant grew more than the wild-type in the nanoparticle-Fe treatment, suggesting Type I plants cope better with Fe limitation; however, the nanoparticle-Fe and no-Fe treatments had similar growth for all plant types. -- Highlights: ► Iron nanoparticles were synthesized and assessed for bioavailability to Arabidopsis. ► Arabidopsis grew better in the presence of EDTA-bound iron than nanoparticulate iron. ► Arabidopsis grew the same in the presence of nanoparticulate iron compared to no iron. -- Synthesized iron nanoparticles were not bioavailable to Arabidopsis thaliana in agar nutrient media

  11. The arabidopsis cyclic nucleotide interactome

    KAUST Repository

    Donaldson, Lara Elizabeth

    2016-05-11

    Background Cyclic nucleotides have been shown to play important signaling roles in many physiological processes in plants including photosynthesis and defence. Despite this, little is known about cyclic nucleotide-dependent signaling mechanisms in plants since the downstream target proteins remain unknown. This is largely due to the fact that bioinformatics searches fail to identify plant homologs of protein kinases and phosphodiesterases that are the main targets of cyclic nucleotides in animals. Methods An affinity purification technique was used to identify cyclic nucleotide binding proteins in Arabidopsis thaliana. The identified proteins were subjected to a computational analysis that included a sequence, transcriptional co-expression and functional annotation analysis in order to assess their potential role in plant cyclic nucleotide signaling. Results A total of twelve cyclic nucleotide binding proteins were identified experimentally including key enzymes in the Calvin cycle and photorespiration pathway. Importantly, eight of the twelve proteins were shown to contain putative cyclic nucleotide binding domains. Moreover, the identified proteins are post-translationally modified by nitric oxide, transcriptionally co-expressed and annotated to function in hydrogen peroxide signaling and the defence response. The activity of one of these proteins, GLYGOLATE OXIDASE 1, a photorespiratory enzyme that produces hydrogen peroxide in response to Pseudomonas, was shown to be repressed by a combination of cGMP and nitric oxide treatment. Conclusions We propose that the identified proteins function together as points of cross-talk between cyclic nucleotide, nitric oxide and reactive oxygen species signaling during the defence response.

  12. Reference: 190 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available llulose, increased pectins, and irregular and ectopic deposition of pectins, xylo...le to proliferate for a limited time as undifferentiated callus and do not show the massive deposition of ectopic

  13. Compensation for unfavorable characteristics of irregular individual shift rotas.

    Science.gov (United States)

    Knauth, Peter; Jung, Detlev; Bopp, Winfried; Gauderer, Patric C; Gissel, Andreas

    2006-01-01

    Some employees of TV companies, such as those who produce remote TV programs, have to cope with very irregular rotas and many short-term schedule deviations. Many of these employees complain about the negative effects of such on their wellbeing and private life. Therefore, a working group of employers, council representatives, and researchers developed a so-called bonus system. Based on the criteria of the BESIAK system, the following list of criteria for the ergonomic assessment of irregular shift systems was developed: proportion of night hours worked between 22 : 00 and 01 : 00 h and between 06 : 00 and 07 : 00 h, proportion of night hours worked between 01 : 00 and 06 : 00 h, number of successive night shifts, number of successive working days, number of shifts longer than 9 h, proportion of phase advances, off hours on weekends, work hours between 17 : 00 and 23 : 00 h from Monday to Friday, number of working days with leisure time at remote places, and sudden deviations from the planned shift rota. Each individual rota was evaluated in retrospect. If pre-defined thresholds of criteria were surpassed, bonus points were added to the worker's account. In general, more bonus points add up to more free time. Only in particular cases was monetary compensation possible for some criteria. The bonus point system, which was implemented in the year 2002 for about 850 employees of the TV company, has the advantages of more transparency concerning the unfavorable characteristics of working-time arrangements, incentive for superiors to design "good" rosters that avoid the bonus point thresholds (to reduce costs), positive short-term effects on the employee social life, and expected positive long-term effects on the employee health. In general, the most promising approach to cope with the problems of shift workers in irregular and flexible shift systems seems to be to increase their influence on the arrangement of working times. If this is not possible, bonus point systems

  14. Glufosinate ammonium selection of transformed Arabidopsis.

    Science.gov (United States)

    Weigel, Detlef; Glazebrook, Jane

    2006-12-01

    INTRODUCTIONOne of the most commonly used markers for the selection of transgenic Arabidopsis is resistance to glufosinate ammonium, an herbicide that is sold under a variety of trade names including Basta and Finale. Resistance to glufosinate ammonium is conferred by the bacterial bialophos resistance gene (BAR) encoding the enzyme phosphinotricin acetyl transferase (PAT). This protocol describes the use of glufosinate ammonium to select transformed Arabidopsis plants. The major advantage of glufosinate ammonium selection is that it can be performed on plants growing in soil and does not require the use of sterile techniques.

  15. Airway surface irregularities promote particle diffusion in the human lung

    International Nuclear Information System (INIS)

    Martonen, T.; North Carolina Univ., Chapel Hill, NC; Zhang, Z.; Yang, Y.; Bottei, G.

    1995-01-01

    Current NCRP and ICRP particle deposition models employed in risk assessment analyses treat the airways of the human lung as smooth-walled tubes. However, the upper airways of the tracheobronchial (TB) tree are line with cartilaginous rings. Recent supercomputer simulations of in vivo conditions (cited herein), where cartilaginous ring morphologies were based upon fibre-optic bronchoscope examinations, have clearly demonstrated their profound effects upon fluid dynamics. A physiologically based analytical model of fluid dynamics is presented, focusing upon applications to particle diffusion within the TB tree. The new model is the first to describe particle motion while simultaneously simulating effects of wall irregularities, entrance conditions and tube curvatures. This study may explain the enhanced deposition by particle diffusion detected in replica case experiments and have salient implications for the clinically observed preferential distributions of bronchogenic carcinomas associated with inhaled radionuclides. (author)

  16. Massive stars in the Sagittarius Dwarf Irregular Galaxy

    Science.gov (United States)

    Garcia, Miriam

    2018-02-01

    Low metallicity massive stars hold the key to interpret numerous processes in the past Universe including re-ionization, starburst galaxies, high-redshift supernovae, and γ-ray bursts. The Sagittarius Dwarf Irregular Galaxy [SagDIG, 12+log(O/H) = 7.37] represents an important landmark in the quest for analogues accessible with 10-m class telescopes. This Letter presents low-resolution spectroscopy executed with the Gran Telescopio Canarias that confirms that SagDIG hosts massive stars. The observations unveiled three OBA-type stars and one red supergiant candidate. Pending confirmation from high-resolution follow-up studies, these could be the most metal-poor massive stars of the Local Group.

  17. Evaluation of Surface Slope Irregularity in Linear Parabolic Solar Collectors

    Directory of Open Access Journals (Sweden)

    F. Francini

    2012-01-01

    Full Text Available The paper describes a methodology, very simple in its application, for measuring surface irregularities of linear parabolic collectors. This technique was principally developed to be applied in cases where it is difficult to use cumbersome instruments and to facilitate logistic management. The instruments to be employed are a digital camera and a grating. If the reflector surface is defective, the image of the grating, reflected on the solar collector, appears distorted. Analyzing the reflected image, we can obtain the local slope of the defective surface. These profilometric tests are useful to identify and monitor the mirror portions under mechanical stress and to estimate the losses caused by the light rays deflected outside the absorber.

  18. Constructing a logical, regular axis topology from an irregular topology

    Science.gov (United States)

    Faraj, Daniel A.

    2014-07-01

    Constructing a logical regular topology from an irregular topology including, for each axial dimension and recursively, for each compute node in a subcommunicator until returning to a first node: adding to a logical line of the axial dimension a neighbor specified in a nearest neighbor list; calling the added compute node; determining, by the called node, whether any neighbor in the node's nearest neighbor list is available to add to the logical line; if a neighbor in the called compute node's nearest neighbor list is available to add to the logical line, adding, by the called compute node to the logical line, any neighbor in the called compute node's nearest neighbor list for the axial dimension not already added to the logical line; and, if no neighbor in the called compute node's nearest neighbor list is available to add to the logical line, returning to the calling compute node.

  19. Irregularities of ionospheric VTEC during lightning activity over Antarctic Peninsula

    International Nuclear Information System (INIS)

    Suparta, W; Wan Mohd Nor, W N A

    2017-01-01

    This paper investigates the irregularities of vertical total electron content (VTEC) during lightning activity and geomagnetic quiet days over Antarctic Peninsula in year 2014. During the lightning event, the ionosphere may be disturbed which may cause disruption in the radio signal. Thus, it is important to understand the influence of lightning on VTEC in the study of upper-lower interaction. The lightning data is obtained from World Wide Lightning Location Network (WWLLN) and the VTEC data has analyzed from Global Positioning System (GPS) for O’Higgins (OHI3), Palmer (PALV), and Rothera (ROTH). The results demonstrate the VTEC variation of ∼0.2 TECU during low lightning activity which could be caused by energy dissipation through lightning discharges from troposphere into the thermosphere. (paper)

  20. Global scale ionospheric irregularities associated with thunderstorm activity

    International Nuclear Information System (INIS)

    Pulinets, Sergey A.; Depuev, Victor H.

    2003-01-01

    The potential difference near 280 kV exists between ground and ionosphere. This potential difference is generated by thunderstorm discharges all over the world, and return current closes the circuit in the areas of fair weather (so-called fair weather current). The model calculations and experimental measurements clearly demonstrate non-uniform latitude-longitude distribution of electric field within the atmosphere. The recent calculations show that the strong large scale vertical atmospheric electric field can penetrate into the ionosphere and create large scale irregularities of the electron concentration. To check this the global distributions of thunderstorm activity obtained with the satellite monitoring for different seasons were compared with the global distributions of ionosphere critical frequency (which is equivalent to peak electron concentration) obtained with the help of satellite topside sounding. The similarity of the obtained global distributions clearly demonstrates the effects of thunderstorm electric fields onto the Earth's ionosphere. (author)

  1. Global scale ionospheric irregularities associated with thunderstorm activity

    CERN Document Server

    Pulinets, S A

    2002-01-01

    The potential difference near 280 kV exists between ground and ionosphere. This potential difference is generated by thunderstorm discharges all over the world, and return current closes the circuit in the areas of fair weather (so-called fair weather current). The model calculations and experimental measurements clearly demonstrate non-uniform latitude-longitude distribution of electric field within the atmosphere. The recent calculations show that the strong large scale vertical atmospheric electric field can penetrate into the ionosphere and create large scale irregularities of the electron concentration. To check this the global distributions of thunderstorm activity obtained with the satellite monitoring for different seasons were compared with the global distributions of ionosphere critical frequency (which is equivalent to peak electron concentration) obtained with the help of satellite topside sounding. The similarity of the obtained global distributions clearly demonstrates the effects of thunderstor...

  2. Asymmetry and irregularity border as discrimination factor between melanocytic lesions

    Science.gov (United States)

    Sbrissa, David; Pratavieira, Sebastião.; Salvio, Ana Gabriela; Kurachi, Cristina; Bagnato, Vanderlei Salvadori; Costa, Luciano Da Fontoura; Travieso, Gonzalo

    2015-06-01

    Image processing tools have been widely used in systems supporting medical diagnosis. The use of mobile devices for the diagnosis of melanoma can assist doctors and improve their diagnosis of a melanocytic lesion. This study proposes a method of image analysis for melanoma discrimination from other types of melanocytic lesions, such as regular and atypical nevi. The process is based on extracting features related with asymmetry and border irregularity. It were collected 104 images, from medical database of two years. The images were obtained with standard digital cameras without lighting and scale control. Metrics relating to the characteristics of shape, asymmetry and curvature of the contour were extracted from segmented images. Linear Discriminant Analysis was performed for dimensionality reduction and data visualization. Segmentation results showed good efficiency in the process, with approximately 88:5% accuracy. Validation results presents sensibility and specificity 85% and 70% for melanoma detection, respectively.

  3. Manufacturing of Cast Metal Foams with Irregular Cell Structure

    Directory of Open Access Journals (Sweden)

    Kroupová I.

    2015-06-01

    Full Text Available Metallic foams are materials of which the research is still on-going, with the broad applicability in many different areas (e.g. automotive industry, building industry, medicine, etc.. These metallic materials have specific properties, such as large rigidity at low density, high thermal conductivity, capability to absorb energy, etc. The work is focused on the preparation of these materials using conventional casting technology (infiltration method, which ensures rapid and economically feasible method for production of shaped components. In the experimental part we studied conditions of casting of metallic foams with open pores and irregular cell structure made of ferrous and nonferrous alloys by use of various types of filler material (precursors.

  4. Method for hot pressing irregularly shaped refractory articles

    Science.gov (United States)

    Steinkamp, William E.; Ballard, Ambrose H.

    1982-01-01

    The present invention is directed to a method for hot pressing irregularly haped refractory articles with these articles of varying thickness being provided with high uniform density and dimensional accuracy. Two partially pressed compacts of the refractory material are placed in a die cavity between displaceable die punches having compact-contacting surfaces of the desired article configuration. A floating, rotatable block is disposed between the compacts. The displacement of the die punches towards one another causes the block to rotate about an axis normal to the direction of movement of the die punches to uniformly distribute the pressure loading upon the compacts for maintaining substantially equal volume displacement of the powder material during the hot pressing operation.

  5. Irregular Migration - between legal status and social practices

    DEFF Research Database (Denmark)

    Lund Thomsen, Trine

    2012-01-01

    Arnfinn H. and Rogstad, Jon 2.Book reviews by null 3.INVISIBLE IMMIGRANTS, VISIBLE EXPATS? Americans in Finnish discourses on immigration and internationalization by Leinonen, Johanna 4.Migrants in the Scandinavian Welfare State by Brochmann, Grete and Hagelund, Anniken 5.TOWARD AN IDENTITY STRESS....... Language and religious affiliations of an immigrant adolescent in Norway by Haque, Shahzaman View Top 20 Most Downloaded Articles Previous Article Next Article Go to table of contents Download full text pdf (PDF, 425 KB) Irregular Migration – Between Legal Status and Social Practices Narratives of Polish...... connected to the specific area of activity and to the accumulated capital of the individual. The aim is to identify how opportunity structures affect the migration process and how migrants react to them depending on the available capital and biographical knowledge and experiences. The horizon of experience...

  6. New Computational Approach to Electron Transport in Irregular Graphene Nanostructures

    Science.gov (United States)

    Mason, Douglas; Heller, Eric; Prendergast, David; Neaton, Jeffrey

    2009-03-01

    For novel graphene devices of nanoscale-to-macroscopic scale, many aspects of their transport properties are not easily understood due to difficulties in fabricating devices with regular edges. Here we develop a framework to efficiently calculate and potentially screen electronic transport properties of arbitrary nanoscale graphene device structures. A generalization of the established recursive Green's function method is presented, providing access to arbitrary device and lead geometries with substantial computer-time savings. Using single-orbital nearest-neighbor tight-binding models and the Green's function-Landauer scattering formalism, we will explore the transmission function of irregular two-dimensional graphene-based nanostructures with arbitrary lead orientation. Prepared by LBNL under contract DE-AC02-05CH11231 and supported by the U.S. Dept. of Energy Computer Science Graduate Fellowship under grant DE-FG02-97ER25308.

  7. Kriging for interpolation of sparse and irregularly distributed geologic data

    Energy Technology Data Exchange (ETDEWEB)

    Campbell, K.

    1986-12-31

    For many geologic problems, subsurface observations are available only from a small number of irregularly distributed locations, for example from a handful of drill holes in the region of interest. These observations will be interpolated one way or another, for example by hand-drawn stratigraphic cross-sections, by trend-fitting techniques, or by simple averaging which ignores spatial correlation. In this paper we consider an interpolation technique for such situations which provides, in addition to point estimates, the error estimates which are lacking from other ad hoc methods. The proposed estimator is like a kriging estimator in form, but because direct estimation of the spatial covariance function is not possible the parameters of the estimator are selected by cross-validation. Its use in estimating subsurface stratigraphy at a candidate site for geologic waste repository provides an example.

  8. Towards intrinsic magnetism of graphene sheets with irregular zigzag edges.

    Science.gov (United States)

    Chen, Lianlian; Guo, Liwei; Li, Zhilin; Zhang, Han; Lin, Jingjing; Huang, Jiao; Jin, Shifeng; Chen, Xiaolong

    2013-01-01

    The magnetism of graphene has remained divergent and controversial due to absence of reliable experimental results. Here we show the intrinsic magnetism of graphene edge states revealed based on unidirectional aligned graphene sheets derived from completely carbonized SiC crystals. It is found that ferromagnetism, antiferromagnetism and diamagnetism along with a probable superconductivity exist in the graphene with irregular zigzag edges. A phase diagram is constructed to show the evolution of the magnetism. The ferromagnetic ordering curie-temperature of the fundamental magnetic order unit (FMOU) is 820 ± 80 K. The antiferromagnetic ordering Neel temperature of the FMOUs belonging to different sublattices is about 54 ± 2 K. The diamagnetism is similar to that of graphite and can be well described by the Kotosonov's equation. Our experimental results provide new evidences to clarify the controversial experimental phenomena observed in graphene and contribute to a deeper insight into the nature of magnetism in graphene based system.

  9. Combined radar observations of equatorial electrojet irregularities at Jicamarca

    Directory of Open Access Journals (Sweden)

    D. L. Hysell

    2007-03-01

    Full Text Available Daytime equatorial electrojet plasma irregularities were investigated using five distinct radar diagnostics at Jicamarca including range-time-intensity (RTI mapping, Faraday rotation, radar imaging, oblique scattering, and multiple-frequency scattering using the new AMISR prototype UHF radar. Data suggest the existence of plasma density striations separated by 3–5 km and propagating slowly downward. The striations may be caused by neutral atmospheric turbulence, and a possible scenario for their formation is discussed. The Doppler shifts of type 1 echoes observed at VHF and UHF frequencies are compared and interpreted in light of a model of Farley Buneman waves based on kinetic ions and fluid electrons with thermal effects included. Finally, the up-down and east-west asymmetries evident in the radar observations are described and quantified.

  10. Comparison of different dose calculation methods for irregular photon fields

    International Nuclear Information System (INIS)

    Zakaria, G.A.; Schuette, W.

    2000-01-01

    In this work, 4 calculation methods (Wrede method, Clarskon method of sector integration, beam-zone method of Quast and pencil-beam method of Ahnesjoe) are introduced to calculate point doses in different irregular photon fields. The calculations cover a typical mantle field, an inverted Y-field and different blocked fields for 4 and 10 MV photon energies. The results are compared to those of measurements in a water phantom. The Clarkson and the pencil-beam method have been proved to be the methods of equal standard in relation to accuracy. Both of these methods are being distinguished by minimum deviations and applied in our clinical routine work. The Wrede and beam-zone methods deliver useful results to central beam and yet provide larger deviations in calculating points beyond the central axis. (orig.) [de

  11. Experimental Study of Irregular Waves on a Gravel Beach

    Science.gov (United States)

    Hu, Nai-Ren; Wu, Yun-Ta; Hwung, Hwung-Hweng; Yang, Ray-Yeng

    2017-04-01

    In the east coast of Taiwan, the sort grain size more belongs to cobble or gravel, which is physically distinct compared to the sandy beach in the west coast of Taiwan. Although gravel beaches can dissipate more of wave energy, gravel beaches were eroded and coastal road were damaged especially during typhoons. The purpose of this study is to investigate the geomorphological response of gravel beach due to irregular waves. This experiment was carry out in a 21m long, 50 cm wide, 70 cm high wave tank at Tainan Hydraulics Laboratory, National Cheng-Kung University, Taiwan. To simulate of the geometry in the east coast of Taiwan, a physical model with 1/36 scale-down was used, in which the seawall was 10cm built upon a 1:10 slope and gravel grains with D50 being 3.87 mm was nourished in front of the seawall. In terms of typhoon-scale wave condition, irregular waves with scale-down conditions were generated for 600 s for each scenarios and, three different water levels with respect to the gravel beach are designed. Application of laser combined with image processing to produce 3D topographic map, the erosion zone and accretion zone would be found. The resulting morphological change of gravel beach will be measured using an integrated laser and image processing tool to have 3D topographic maps. It is expected to have more understanding about under what conditions the gravel coasts suffer the least damage. In particular, the relation between erosion rates of gravel beach, the angle of gravel slope and the length of the plane on the gravel slope will be achieved

  12. Tamoxifen treatment of bleeding irregularities associated with Norplant use.

    Science.gov (United States)

    Abdel-Aleem, Hany; Shaaban, Omar M; Amin, Ahmed F; Abdel-Aleem, Aly M

    2005-12-01

    To evaluate the possible role of tamoxifen (selective estrogen receptor modulators, SERM) in treating bleeding irregularities associated with Norplant contraceptive use. Randomized clinical trial including 100 Norplant users complaining of vaginal bleeding irregularities. The trial was conducted in the Family Planning Clinic of Assiut University Hospital. Women were assigned at random to receive tamoxifen tablets (10 mg) twice daily for 10 days or similar placebo. Women were followed-up for 3 months. The end points were percentage of women who stopped bleeding during treatment, bleeding/spotting days during the period of follow-up, effect of treatment on their lifestyle, and side effects and discontinuation of contraception. There was good compliance with treatment. At the end of treatment, a significantly higher percentage of tamoxifen users stopped bleeding in comparison to the control group (88% vs. 68%, respectively; p=.016). Women who used tamoxifen had significantly less bleeding and/or spotting days than women who used placebo, during the first and second months. During the third month, there were no significant differences between the two groups. Women who used tamoxifen reported improvement in performing household activities, religious duties and in sexual life, during the first 2 months. In the third month, there were no differences between the two groups. There were no significant differences between tamoxifen and placebo groups in reporting side effects. In the group who used tamoxifen, two women discontinued Norplant use because of bleeding vs. nine women in the placebo group. Tamoxifen use at a dose of 10 mg twice daily orally, for 10 days, has a beneficial effect on vaginal bleeding associated with Norplant use. In addition, the bleeding pattern was better in women who used tamoxifen for the following 2 months after treatment. However, these results have to be confirmed in a larger trial before advocating this line of treatment.

  13. ESA' s novel gravitational modeling of irregular planetary bodies

    Science.gov (United States)

    Ortega, Guillermo

    A detailed understanding and modeling of the gravitational modeling is required for realistic investigation of the dynamics of orbits close to irregularly shaped bodies. Gravity field modelling up to a certain maximum spherical harmonic degree N involves N2 unkown spherical harmonic coefficients or complex harmonics. The corresponding number of matrix entries reaches till N4 . For missions like CHAMP, GRACE or GOCE, the maximum degree of resolution is 75, 150 and 300 respectively. Therefore, the number of unknowns for a satellite like GOCE will be around 100.000. Since these missions usually fly for a period of time of several years, the number of observations is huge. Hence, gravity field recovery from these missions is a high demanding task. The classical approaches like spherical expansion of the potential lead generally to a high number of coefficients, which reduce the software computational efficiency of the orbit propagation and which have mostly a limited physical meaning. One of the main targets of the activity is the modelling of asteroids, small moons, and cometary bodies. All celestial bodies are irregular by definition. However, the scope of the activity is broad enough as to be able to use the models and the software in quasy-regular bodies as well. Therefore the models and tools could be used for bodies such as the Moon, Mars, Venus, Deimos, Europa, Eros, Mathilda, and Churyumov-Gerasimenko, etc., being these applications relevant for scientific (Rosetta, Bepi Colombo), exploration (Exo-Mars), NEO mitigation (Don Quijote) and Earth observation (GOCE) missions of ESA.

  14. Volume determination of irregularly-shaped quasi-spherical nanoparticles.

    Science.gov (United States)

    Attota, Ravi Kiran; Liu, Eileen Cherry

    2016-11-01

    Nanoparticles (NPs) are widely used in diverse application areas, such as medicine, engineering, and cosmetics. The size (or volume) of NPs is one of the most important parameters for their successful application. It is relatively straightforward to determine the volume of regular NPs such as spheres and cubes from a one-dimensional or two-dimensional measurement. However, due to the three-dimensional nature of NPs, it is challenging to determine the proper physical size of many types of regularly and irregularly-shaped quasi-spherical NPs at high-throughput using a single tool. Here, we present a relatively simple method that determines a better volume estimate of NPs by combining measurements from their top-down projection areas and peak heights using two tools. The proposed method is significantly faster and more economical than the electron tomography method. We demonstrate the improved accuracy of the combined method over scanning electron microscopy (SEM) or atomic force microscopy (AFM) alone by using modeling, simulations, and measurements. This study also exposes the existence of inherent measurement biases for both SEM and AFM, which usually produce larger measured diameters with SEM than with AFM. However, in some cases SEM measured diameters appear to have less error compared to AFM measured diameters, especially for widely used IS-NPs such as of gold, and silver. The method provides a much needed, proper high-throughput volumetric measurement method useful for many applications. Graphical Abstract The combined method for volume determination of irregularly-shaped quasi-spherical nanoparticles.

  15. Reproducibility of irregular radiation fields for malignant lymphoma

    International Nuclear Information System (INIS)

    Mock, U.; Dieckmann, K.; Poetter, R.; Molitor, A.M.; Haverkamp, U.

    1998-01-01

    Purpose: Radiation treatment for malignant lymphoma requires large field irradiation with irregular blocks according to the individual anatomy and tumor configuration. For determination of safety margins (PTV) we quantitatively analysed the accuracy of field and block placement with regard to different anatomical regions. Patients and Methods: Forty patients with malignant lymphoma were irradiated using the classical supra-/infradiaphragmatic field arrangements. Treatment was performed with 10-MeV photons and irregularly shaped, large opposing fields. We evaluated the accuracy of field and block placements during the treatment courses by comparing the regularly performed verification - with the simulation films. Deviations were determined with respect to the field edges and the central axis, along the x- and z-axis. Results: With regard to the field edges, mean deviations of 2.0 mm and 3.4 mm were found along the x- and z-axis. The corresponding standard deviations were 3.4 mm and 5.5 mm, respectively. With regard to the shielding blocks, mean displacement along the x- and z-axis was 2.2 mm and 3.8 mm. In addition, overall standard deviations of 5.7 mm (x-axis) and 7.1 mm (z-axis) were determined. During the course of time an improved accuracy of block placement was notable. Conclusion: Systematic analysis of port films gives information for a better defining safety margins in external radiotherapy. Evaluation of verification films on a regular basis improves set-up accuracy by reducing displacements. (orig.) [de

  16. Measurements of electron density irregularities in the ionosphere of Jupiter by Pioneer 10

    International Nuclear Information System (INIS)

    Woo, R.; Yang, F.

    1976-01-01

    In this paper we demonstrate that when the frequency spectrum of the log amplitude fluctuations is used, the radio occultation experiment is a powerful tool for detecting, identifying, and studying ionospheric irregularities. Analysis of the Pioneer 10 radio occultation measurements reveals that the Jovian ionosphere possesses electron density irregularities which are very similar to those found in the earth's ionosphere. This is the first time such irregularities have been found in a planetary ionosphere other than that of earth. The Pioneer 10 results indicate that the spatial wave number spectrum of the electron density irregularities is close to the Kolmogorov spectrum and that the outer scale size is greater than the Fresnel size (6.15 km). This type of spectrum suggests that the irregularities are probably produced by the turbulent dissipation of irregularities larger than the outer scale size

  17. Crime among irregular immigrants and the influence of internal border control

    OpenAIRE

    Leerkes, Arjen; Engbersen, Godfried; Leun, Joanne

    2012-01-01

    textabstractBoth the number of crime suspects without legal status and the number of irregular or undocumented immigrants held in detention facilities increased substantially in theNetherlands between 1997 and 2003. In this period, theDutch state increasingly attempted to exclude irregular immigrants from the formal labour market and public provisions. At the same time the registered crime among irregular migrants rose. The 'marginalisation thesis' asserts that a larger number of migrants hav...

  18. Effects of magnetic storm phases on F layer irregularities below the auroral oval

    International Nuclear Information System (INIS)

    Aarons, J.; Gurgiolo, C.; Rodger, A.S.

    1988-01-01

    Observations of F-layer irregularity development and intensity were obtained between September and October 1981, primarily over subauroral latitudes in the area of the plasmapause. The results reveal the descent of the auroral irregularity region to include subauroral latitudes in the general area of the plasmapause during the main phases of a series of magnetic storms. Irregularities were found primarily at lower latitudes during the subauroral or plasmapause storm. A model for the subauroral irregularities in recovery phases of magnetic storms is proposed in which energy stored in the ring current is slowly released. 27 references

  19. Dependence on zenith angle of the strength of 3-meter equatorial electrojet irregularities

    International Nuclear Information System (INIS)

    Ierkic, H.M.; Fejer, B.G.; Farley, D.T.

    1980-01-01

    Radar measurements in Peru were used to deduce the zenith angle dependence of the scattering cross section of plasma irregularities generated by instabilities in the equatorial electrojet. The irregularities probed by the 50 MHz Jicamarca radar had a wavelength of 3m. The cross section for the type 2 irregularities was isotopic in the plane perpendicular to the magnetic field, while the cross section for the stronger type 1 irregularities varied with zenith angle at a rate of approximately 0.3 dB/degree; the horizontally traveling waves were more than 100 times stronger than those traveling vertically

  20. Spatial irregularities in Jupiter's upper ionosphere observed by Voyager radio occultations

    Science.gov (United States)

    Hinson, D. P.; Tyler, G. L.

    1982-01-01

    Radio scintillations (at 3.6 and 13 cm) produced by scattering from ionospheric irregularities during the Voyager occultations are interpreted using a weak-scattering theory. Least squares solutions for ionospheric parameters derived from the observed fluctuation spectra yield estimates of (1) the axial ratio, (2) angular orientation of the anisotropic irregularities, (3) the power law exponent of the spatial spectrum of irregularities, and (4) the magnitude of the spatial variations in electron density. It is shown that the measured angular orientation of the anisotropic irregularities indicates magnetic field direction and may provide a basis for refining Jovian magnetic field models.

  1. Arabidopsis CDS blastp result: AK288349 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK288349 J090023P19 At2g46590.1 68415.m05811 Dof zinc finger protein DAG2 / Dof affecting germination... 2 (DAG2) identical to SP|Q9ZPY0 DOF zinc finger protein DAG2 (Dof affecting germination 2) {Arabidopsis thaliana} 1e-23 ...

  2. Arabidopsis CDS blastp result: AK241364 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK241364 J065152E11 At2g46590.1 68415.m05811 Dof zinc finger protein DAG2 / Dof affecting germination... 2 (DAG2) identical to SP|Q9ZPY0 DOF zinc finger protein DAG2 (Dof affecting germination 2) {Arabidopsis thaliana} 2e-20 ...

  3. Reference: 439 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available or IID (TFIID) complex. Overexpression of atTAF10 under the control of the 35S promoter in Arabidopsis impro...is TATA box-binding protein (TBP)-associated factor 10 (atTAF10), which constitutes the transcriptional fact

  4. Arabidopsis CDS blastp result: AK064663 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK064663 002-115-A10 At2g34450.1 high mobility group (HMG1/2) family protein simila...r to HMG protein [Arabidopsis thaliana] GI:2832361; contains Pfam profile PF00505: HMG (high mobility group) box 2e-27 ...

  5. Divergent regulation of Arabidopsis SAUR genes

    NARCIS (Netherlands)

    Mourik, van Hilda; Dijk, van Aalt D.J.; Stortenbeker, Niek; Angenent, Gerco C.; Bemer, Marian

    2017-01-01

    Background: Small Auxin-Upregulated RNA (SAUR) genes encode growth regulators that induce cell elongation. Arabidopsis contains more than 70 SAUR genes, of which the growth-promoting function has been unveiled in seedlings, while their role in other tissues remained largely unknown. Here, we

  6. Arabidopsis CDS blastp result: AK120871 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK120871 J023026D19 At1g48900.1 signal recognition particle 54 kDa protein 3 / SRP5...4 (SRP-54C) identical to SP|P49967 Signal recognition particle 54 kDa protein 3 (SRP54) {Arabidopsis thaliana} 0.0 ...

  7. Arabidopsis CDS blastp result: AK071661 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK071661 J023105D07 At5g37770.1 touch-responsive protein / calmodulin-related protein 2, touch...-induced (TCH2) identical to calmodulin-related protein 2,touch-induced SP:P25070 from [Arabidopsis thaliana] 3e-33 ...

  8. Arabidopsis CDS blastp result: AK242428 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242428 J080089P09 At5g37770.1 68418.m04547 touch-responsive protein / calmodulin-related protein 2, touch...-induced (TCH2) identical to calmodulin-related protein 2,touch-induced SP:P25070 from [Arabidopsis thaliana] 9e-19 ...

  9. Arabidopsis CDS blastp result: AK242428 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242428 J080089P09 At2g41100.1 68415.m05076 touch-responsive protein / calmodulin-related protein 3, touch...-induced (TCH3) identical to calmodulin-related protein 3, touch-induced SP:P25071 from [Arabidopsis thaliana] 8e-18 ...

  10. Arabidopsis CDS blastp result: AK241786 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK241786 J065207F05 At5g37770.1 68418.m04547 touch-responsive protein / calmodulin-related protein 2, touch...-induced (TCH2) identical to calmodulin-related protein 2,touch-induced SP:P25070 from [Arabidopsis thaliana] 1e-19 ...

  11. Arabidopsis CDS blastp result: AK242346 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242346 J080012M07 At2g41100.1 68415.m05076 touch-responsive protein / calmodulin-related protein 3, touch...-induced (TCH3) identical to calmodulin-related protein 3, touch-induced SP:P25071 from [Arabidopsis thaliana] 8e-44 ...

  12. Arabidopsis CDS blastp result: AK242428 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242428 J080089P09 At2g41100.1 68415.m05076 touch-responsive protein / calmodulin-related protein 3, touch...-induced (TCH3) identical to calmodulin-related protein 3, touch-induced SP:P25071 from [Arabidopsis thaliana] 2e-14 ...

  13. Arabidopsis CDS blastp result: AK242428 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242428 J080089P09 At2g41100.2 68415.m05077 touch-responsive protein / calmodulin-related protein 3, touch...-induced (TCH3) identical to calmodulin-related protein 3, touch-induced SP:P25071 from [Arabidopsis thaliana] 3e-16 ...

  14. Arabidopsis CDS blastp result: AK242346 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242346 J080012M07 At5g37770.1 68418.m04547 touch-responsive protein / calmodulin-related protein 2, touch...-induced (TCH2) identical to calmodulin-related protein 2,touch-induced SP:P25070 from [Arabidopsis thaliana] 2e-11 ...

  15. Arabidopsis CDS blastp result: AK108506 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK108506 002-143-H11 At5g37770.1 touch-responsive protein / calmodulin-related protein 2, touch...-induced (TCH2) identical to calmodulin-related protein 2,touch-induced SP:P25070 from [Arabidopsis thaliana] 7e-14 ...

  16. Arabidopsis CDS blastp result: AK242346 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242346 J080012M07 At2g41100.1 68415.m05076 touch-responsive protein / calmodulin-related protein 3, touch...-induced (TCH3) identical to calmodulin-related protein 3, touch-induced SP:P25071 from [Arabidopsis thaliana] 4e-41 ...

  17. Arabidopsis CDS blastp result: AK242346 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242346 J080012M07 At5g37770.1 68418.m04547 touch-responsive protein / calmodulin-related protein 2, touch...-induced (TCH2) identical to calmodulin-related protein 2,touch-induced SP:P25070 from [Arabidopsis thaliana] 2e-25 ...

  18. Arabidopsis CDS blastp result: AK242346 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242346 J080012M07 At2g41100.2 68415.m05077 touch-responsive protein / calmodulin-related protein 3, touch...-induced (TCH3) identical to calmodulin-related protein 3, touch-induced SP:P25071 from [Arabidopsis thaliana] 3e-26 ...

  19. Arabidopsis CDS blastp result: AK243656 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK243656 J100088L22 At2g41100.1 68415.m05076 touch-responsive protein / calmodulin-related protein 3, touch...-induced (TCH3) identical to calmodulin-related protein 3, touch-induced SP:P25071 from [Arabidopsis thaliana] 1e-19 ...

  20. Arabidopsis CDS blastp result: AK243656 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK243656 J100088L22 At2g41100.2 68415.m05077 touch-responsive protein / calmodulin-related protein 3, touch...-induced (TCH3) identical to calmodulin-related protein 3, touch-induced SP:P25071 from [Arabidopsis thaliana] 5e-20 ...

  1. Arabidopsis CDS blastp result: AK242346 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242346 J080012M07 At2g41100.2 68415.m05077 touch-responsive protein / calmodulin-related protein 3, touch...-induced (TCH3) identical to calmodulin-related protein 3, touch-induced SP:P25071 from [Arabidopsis thaliana] 3e-44 ...

  2. Arabidopsis CDS blastp result: AK243656 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK243656 J100088L22 At2g41100.1 68415.m05076 touch-responsive protein / calmodulin-related protein 3, touch...-induced (TCH3) identical to calmodulin-related protein 3, touch-induced SP:P25071 from [Arabidopsis thaliana] 2e-17 ...

  3. Arabidopsis CDS blastp result: AK062711 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK062711 001-106-C02 At5g37770.1 touch-responsive protein / calmodulin-related protein 2, touch...-induced (TCH2) identical to calmodulin-related protein 2,touch-induced SP:P25070 from [Arabidopsis thaliana] 9e-34 ...

  4. Arabidopsis CDS blastp result: AK288095 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK288095 J075191E21 At2g41100.1 68415.m05076 touch-responsive protein / calmodulin-related protein 3, touch...-induced (TCH3) identical to calmodulin-related protein 3, touch-induced SP:P25071 from [Arabidopsis thaliana] 2e-16 ...

  5. Arabidopsis CDS blastp result: AK242346 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242346 J080012M07 At2g41100.1 68415.m05076 touch-responsive protein / calmodulin-related protein 3, touch...-induced (TCH3) identical to calmodulin-related protein 3, touch-induced SP:P25071 from [Arabidopsis thaliana] 3e-26 ...

  6. Arabidopsis CDS blastp result: AK288095 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK288095 J075191E21 At2g41100.2 68415.m05077 touch-responsive protein / calmodulin-related protein 3, touch...-induced (TCH3) identical to calmodulin-related protein 3, touch-induced SP:P25071 from [Arabidopsis thaliana] 2e-15 ...

  7. Arabidopsis CDS blastp result: AK068893 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK068893 J023001G24 At4g15090.1 far-red impaired response protein (FAR1) / far-red impai...red responsive protein (FAR1) identical to far-red impaired response protein FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282; contains Pfam:PF03101 domain: FAR1 family 1e-39 ...

  8. Reference: 359 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available 359 http://metadb.riken.jp/db/SciNetS_ria224i/cria224u4ria224u16531491i Cnops Gerda...leaf development in Arabidopsis thaliana. 4 852-66 16531491 2006 Apr The Plant cell Azmi Abdelkrim|Cnops Gerda

  9. Reference: 749 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available former mutant had decreased electron transport rates, a lower DeltapH gradient across the grana membranes, r...the PSII particles of these plants were organized in unusual two-dimensional arrays in the grana membranes. ...d the electron transport rate in grana membranes of Arabidopsis. 4 1012-28 18381925 2008 Apr The Plant cell

  10. Arabidopsis CDS blastp result: AK241679 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK241679 J065193F24 At3g29410.1 68416.m03695 terpene synthase/cyclase family protein similar to terpene... synthase GB:CAA72074 from [Arabidopsis thaliana], contains Pfam profile: PF01397 terpene synthase family 5e-65 ...

  11. Arabidopsis CDS blastp result: AK242212 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242212 J075171E13 At3g29410.1 68416.m03695 terpene synthase/cyclase family protein similar to terpene... synthase GB:CAA72074 from [Arabidopsis thaliana], contains Pfam profile: PF01397 terpene synthase family 1e-21 ...

  12. Reference: 486 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available time in many plant species through the photoperiod and vernalization pathways, re...cipates in both the photoperiod and vernalization pathways in Arabidopsis thaliana by regulating expression ... of VIN3 in a photoperiod-dependent manner. A PHD finger protein involved in both the vernalization and photoperiod pathways

  13. Reference: 751 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available 751 http://metadb.riken.jp/db/SciNetS_ria224i/cria224u4ria224u18390806i Sitaraman ...unctions during Arabidopsis embryo and floral development. 2 672-81 18390806 2008 Jun Plant physiology Bui Minh|Liu Zhongchi|Sitaraman Jayashree

  14. Arabidopsis CDS blastp result: AK103126 [KOME

    Lifescience Database Archive (English)

    Full Text Available 0S proteasome beta subunit PBB1 (PBB1) GB:AAC32066 [Arabidopsis thaliana] (Genetics 149 (2), 677-692 (1998)); contains Pfam profile: PF00227 proteasome A-type and B-type; 1e-129 ...

  15. Roles of DNA methyltransferases in Arabidopsis development ...

    African Journals Online (AJOL)

    Mutations that cause severe loss of DNA methylation often leads to abnormal development. In the present review, we summarized recent findings of the three major DNA methyltransferases mutants playing vital role in development of Arabidopsis thaliana. Keywords: DNA methylation, epigenetics, methyltransferase, mutant ...

  16. Arabidopsis CDS blastp result: AK108796 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK108796 002-151-C01 At2g25320.1 meprin and TRAF homology domain-containing protein / MATH... domain-containing protein weak similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 3e-97 ...

  17. Arabidopsis CDS blastp result: AK102133 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK102133 J033085E13 At5g43560.2 meprin and TRAF homology domain-containing protein / MATH... domain-containing protein weak similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 1e-146 ...

  18. Arabidopsis CDS blastp result: AK105718 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK105718 001-201-F09 At5g43560.2 meprin and TRAF homology domain-containing protein / MATH... domain-containing protein weak similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain 5e-22 ...

  19. Reference: 438 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ity and drought tolerance in Arabidopsis thaliana. 18 6902-12 16943431 2006 Sep Molecular and cellular bio...logy Chen Zhizhong|Gong Zhizhong|Hong Xuhui|Jablonowski Daniel|Ren Xiaozhi|Schaffrath Raffael|Zhang Hairong|Zhou Xiaofeng|Zhu Jian-Kang

  20. Reference: 356 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available 006 Mar Plant molecular biology Deng Xingwang|Dong Li|Wang Lei|Xue Yongbiao|Zhang Yansheng|Zhang Yu'e ...ein CEGENDUO negatively regulates auxin-mediated lateral root formation in Arabidopsis. 4 599-615 16525894 2

  1. Proteomics of Arabidopsis seed germination and priming

    NARCIS (Netherlands)

    Gallardo, K.; Job, C.; Groot, S.P.C.; Puype, M.; Demol, H.; Vandekerckhove, J.; Job, D.

    2003-01-01

    To better understand seed germination, a complex developmental process, we developed a proteome analysis of the model plant Arabidopsis for which complete genome sequence is now available. Among about 1,300 total seed proteins resolved in two-dimensional gels, changes in the abundance (up- and

  2. Reference: 689 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available the high affinity of MOT1 allows plants to obtain scarce Mo from soil. An Arabidopsis thaliana high-affinity... molybdate transporter required for efficient uptake of molybdate from soil. 47 18807-12 18003916 2007 Nov P

  3. Reference: 169 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available e M et al. 2005 Mar. Plant J. 41(5):744-54. The recessive Arabidopsis thalianafumonisin B1-resistant (fbr6) ...opment and sensitivity to fumonisin B1. 5 744-54 15703061 2005 Mar The Plant journal Liang Xinwen|Nekl Emily R|Stiers Justin J|Stone Julie M

  4. Arabidopsis CDS blastp result: AK243131 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK243131 J100030A12 At1g21450.1 68414.m02682 scarecrow-like transcription factor 1 ...(SCL1) identical to scarecrow-like 1 GB:AAF21043 GI:6644390 from [Arabidopsis thaliana] 4e-46 ...

  5. Arabidopsis CDS blastp result: AK242412 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242412 J080076J05 At1g21450.1 68414.m02682 scarecrow-like transcription factor 1 ...(SCL1) identical to scarecrow-like 1 GB:AAF21043 GI:6644390 from [Arabidopsis thaliana] 1e-36 ...

  6. Arabidopsis CDS blastp result: AK065420 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK065420 J013022D10 At5g13630.1 magnesium-chelatase subunit chlH, chloroplast, puta...tive / Mg-protoporphyrin IX chelatase, putative (CHLH) nearly identical to magnesium chelatase subunit GI:11...54627 from [Arabidopsis thaliana]; contains Pfam profile: PF02514 CobN/magnesium chelatase family protein 1e-166 ...

  7. Arabidopsis CDS blastp result: AK062262 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK062262 001-047-H04 At5g13630.1 magnesium-chelatase subunit chlH, chloroplast, put...ative / Mg-protoporphyrin IX chelatase, putative (CHLH) nearly identical to magnesium chelatase subunit GI:1...154627 from [Arabidopsis thaliana]; contains Pfam profile: PF02514 CobN/magnesium chelatase family protein 0.0 ...

  8. Arabidopsis CDS blastp result: AK069545 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK069545 J023025I06 At5g13630.1 magnesium-chelatase subunit chlH, chloroplast, puta...tive / Mg-protoporphyrin IX chelatase, putative (CHLH) nearly identical to magnesium chelatase subunit GI:11...54627 from [Arabidopsis thaliana]; contains Pfam profile: PF02514 CobN/magnesium chelatase family protein 0.0 ...

  9. Arabidopsis CDS blastp result: AK067323 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK067323 J013106B16 At5g13630.1 magnesium-chelatase subunit chlH, chloroplast, puta...tive / Mg-protoporphyrin IX chelatase, putative (CHLH) nearly identical to magnesium chelatase subunit GI:11...54627 from [Arabidopsis thaliana]; contains Pfam profile: PF02514 CobN/magnesium chelatase family protein 0.0 ...

  10. Arabidopsis CDS blastp result: AK060612 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK060612 001-025-F03 At5g13630.1 magnesium-chelatase subunit chlH, chloroplast, put...ative / Mg-protoporphyrin IX chelatase, putative (CHLH) nearly identical to magnesium chelatase subunit GI:1...154627 from [Arabidopsis thaliana]; contains Pfam profile: PF02514 CobN/magnesium chelatase family protein 0.0 ...

  11. Arabidopsis CDS blastp result: AK107208 [KOME

    Lifescience Database Archive (English)

    Full Text Available Ala hydrolase, putative virtually identical to gr1-protein from [Arabidopsis thaliana] GI:3559811; similar t...AK107208 002-125-B11 At1g44350.1 IAA-amino acid hydrolase 6, putative (ILL6) / IAA-

  12. Arabidopsis CDS blastp result: AK065124 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK065124 J013001P04 At1g44446.1 chlorophyll a oxygenase (CAO) / chlorophyll b synthase identical to chloroph...yll a oxygenase GI:5853117 from [Arabidopsis thaliana]; contains Pfam PF00355 Rieske [2Fe-2S] domain 0.0 ...

  13. Arabidopsis CDS blastp result: AK067730 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK067730 J013116K15 At1g44446.1 chlorophyll a oxygenase (CAO) / chlorophyll b synthase identical to chloroph...yll a oxygenase GI:5853117 from [Arabidopsis thaliana]; contains Pfam PF00355 Rieske [2Fe-2S] domain 0.0 ...

  14. Arabidopsis CDS blastp result: AK103940 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK103940 001-013-G08 At5g54190.1 protochlorophyllide reductase A, chloroplast / PCR A / NADPH-protochlorophy...llide oxidoreductase A (PORA) identical to SP:Q42536 protochlorophyllide reductase ...A, chloroplast precursor (EC 1.3.1.33) (PCR A) (NADPH-protochlorophyllide oxidoreductase A) (POR A) [Arabidopsis thaliana] 1e-130 ...

  15. Arabidopsis CDS blastp result: AK063367 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK063367 001-114-D11 At1g44446.1 chlorophyll a oxygenase (CAO) / chlorophyll b synthase identical to chlorop...hyll a oxygenase GI:5853117 from [Arabidopsis thaliana]; contains Pfam PF00355 Rieske [2Fe-2S] domain 0.0 ...

  16. Arabidopsis CDS blastp result: AK071899 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK071899 J013059G06 At1g44446.1 chlorophyll a oxygenase (CAO) / chlorophyll b synthase identical to chloroph...yll a oxygenase GI:5853117 from [Arabidopsis thaliana]; contains Pfam PF00355 Rieske [2Fe-2S] domain 1e-154 ...

  17. Arabidopsis CDS blastp result: AK104855 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK104855 001-043-B11 At5g54190.1 protochlorophyllide reductase A, chloroplast / PCR A / NADPH-protochlorophy...llide oxidoreductase A (PORA) identical to SP:Q42536 protochlorophyllide reductase ...A, chloroplast precursor (EC 1.3.1.33) (PCR A) (NADPH-protochlorophyllide oxidoreductase A) (POR A) [Arabidopsis thaliana] 1e-130 ...

  18. Arabidopsis CDS blastp result: AK105724 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK105724 001-201-G07 At1g07110.1 fructose-6-phosphate 2-kinase / fructose-2,6-bisph...osphatase (F2KP) identical to fructose-6-phosphate 2-kinase/fructose-2,6-bisphosphatase (F2KP) [Arabidopsis thaliana] GI:13096098 0.0 ...

  19. Arabidopsis CDS blastp result: AK106106 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK106106 001-207-C12 At1g07110.1 fructose-6-phosphate 2-kinase / fructose-2,6-bisph...osphatase (F2KP) identical to fructose-6-phosphate 2-kinase/fructose-2,6-bisphosphatase (F2KP) [Arabidopsis thaliana] GI:13096098 9e-39 ...

  20. Arabidopsis CDS blastp result: AK072243 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK072243 J023003N10 At1g07110.1 fructose-6-phosphate 2-kinase / fructose-2,6-bispho...sphatase (F2KP) identical to fructose-6-phosphate 2-kinase/fructose-2,6-bisphosphatase (F2KP) [Arabidopsis thaliana] GI:13096098 0.0 ...

  1. Arabidopsis CDS blastp result: AK065086 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK065086 J013001L18 At1g07110.1 fructose-6-phosphate 2-kinase / fructose-2,6-bispho...sphatase (F2KP) identical to fructose-6-phosphate 2-kinase/fructose-2,6-bisphosphatase (F2KP) [Arabidopsis thaliana] GI:13096098 0.0 ...

  2. Arabidopsis CDS blastp result: AK105066 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK105066 001-044-F12 At1g07110.1 fructose-6-phosphate 2-kinase / fructose-2,6-bisph...osphatase (F2KP) identical to fructose-6-phosphate 2-kinase/fructose-2,6-bisphosphatase (F2KP) [Arabidopsis thaliana] GI:13096098 1e-166 ...

  3. Arabidopsis CDS blastp result: AK069285 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK069285 J023011N22 At1g07110.1 fructose-6-phosphate 2-kinase / fructose-2,6-bispho...sphatase (F2KP) identical to fructose-6-phosphate 2-kinase/fructose-2,6-bisphosphatase (F2KP) [Arabidopsis thaliana] GI:13096098 0.0 ...

  4. Arabidopsis CDS blastp result: AK242707 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242707 J090040M15 At1g70550.2 68414.m08120 expressed protein similar to hypotheti...cal protein GB:AAD31338 [Arabidopsis thaliana] and to putative putative carboxyl-terminal peptidase GB:AAC16

  5. Arabidopsis CDS blastp result: AK241860 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK241860 J065216G12 At1g70550.1 68414.m08119 expressed protein similar to hypotheti...cal protein GB:AAD31338 [Arabidopsis thaliana] and to putative putative carboxyl-terminal peptidase GB:AAC16

  6. Arabidopsis CDS blastp result: AK242707 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242707 J090040M15 At1g70550.1 68414.m08119 expressed protein similar to hypotheti...cal protein GB:AAD31338 [Arabidopsis thaliana] and to putative putative carboxyl-terminal peptidase GB:AAC16

  7. Arabidopsis CDS blastp result: AK241860 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK241860 J065216G12 At1g70550.2 68414.m08120 expressed protein similar to hypotheti...cal protein GB:AAD31338 [Arabidopsis thaliana] and to putative putative carboxyl-terminal peptidase GB:AAC16

  8. Arabidopsis CDS blastp result: AK242472 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242472 J080303B22 At1g70550.2 68414.m08120 expressed protein similar to hypotheti...cal protein GB:AAD31338 [Arabidopsis thaliana] and to putative putative carboxyl-terminal peptidase GB:AAC16

  9. Arabidopsis CDS blastp result: AK073288 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK073288 J033028L24 At1g70550.2 expressed protein similar to hypothetical protein G...B:AAD31338 [Arabidopsis thaliana] and to putative putative carboxyl-terminal peptidase GB:AAC16072 [Arabidop

  10. Arabidopsis CDS blastp result: AK242472 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242472 J080303B22 At1g70550.1 68414.m08119 expressed protein similar to hypotheti...cal protein GB:AAD31338 [Arabidopsis thaliana] and to putative putative carboxyl-terminal peptidase GB:AAC16

  11. Arabidopsis CDS blastp result: AK242472 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242472 J080303B22 At5g46200.1 68418.m05684 expressed protein contains similarity to carboxyl-term...inal proteinase contains Pfam profile PF03080: Arabidopsis proteins of unknown function; expression supported by MPSS 2e-33 ...

  12. Arabidopsis CDS blastp result: AK104980 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK104980 001-125-D09 At1g70550.2 expressed protein similar to hypothetical protein ...GB:AAD31338 [Arabidopsis thaliana] and to putative putative carboxyl-terminal peptidase GB:AAC16072 [Arabido

  13. Arabidopsis CDS blastp result: AK289251 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK289251 J100081E23 At4g16390.1 68417.m02481 chloroplastic RNA-binding protein P67,... putative nearly identical to 67kD chloroplastic RNA-binding protein, P67 [Arabidopsis thaliana] GI:9755842 6e-21 ...

  14. Arabidopsis CDS blastp result: AK287737 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK287737 J065143M09 At4g16390.1 68417.m02481 chloroplastic RNA-binding protein P67,... putative nearly identical to 67kD chloroplastic RNA-binding protein, P67 [Arabidopsis thaliana] GI:9755842 7e-14 ...

  15. Arabidopsis CDS blastp result: AK288338 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK288338 J090023E14 At4g16390.1 68417.m02481 chloroplastic RNA-binding protein P67,... putative nearly identical to 67kD chloroplastic RNA-binding protein, P67 [Arabidopsis thaliana] GI:9755842 9e-22 ...

  16. Arabidopsis CDS blastp result: AK288935 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK288935 J090082J19 At4g16390.1 68417.m02481 chloroplastic RNA-binding protein P67,... putative nearly identical to 67kD chloroplastic RNA-binding protein, P67 [Arabidopsis thaliana] GI:9755842 8e-21 ...

  17. Arabidopsis CDS blastp result: AK241112 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK241112 J065091K02 At4g16390.1 68417.m02481 chloroplastic RNA-binding protein P67,... putative nearly identical to 67kD chloroplastic RNA-binding protein, P67 [Arabidopsis thaliana] GI:9755842 1e-16 ...

  18. Arabidopsis CDS blastp result: AK240855 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK240855 J065021H02 At4g16390.1 68417.m02481 chloroplastic RNA-binding protein P67,... putative nearly identical to 67kD chloroplastic RNA-binding protein, P67 [Arabidopsis thaliana] GI:9755842 7e-25 ...

  19. Arabidopsis CDS blastp result: AK288753 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK288753 J090065M09 At4g16390.1 68417.m02481 chloroplastic RNA-binding protein P67,... putative nearly identical to 67kD chloroplastic RNA-binding protein, P67 [Arabidopsis thaliana] GI:9755842 3e-29 ...

  20. Arabidopsis CDS blastp result: AK288612 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK288612 J090053J15 At4g16390.1 68417.m02481 chloroplastic RNA-binding protein P67,... putative nearly identical to 67kD chloroplastic RNA-binding protein, P67 [Arabidopsis thaliana] GI:9755842 5e-24 ...

  1. Reference: 632 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Ludmila et al. 2007 Sep. Plant J. 51(5):874-85. One of the earliest responses of plants to environmental str...elopment in reaction to adverse environmental conditions. We show that the AtCHR12 chromatin-remodeling gene...R12 mediates temporary growth arrest in Arabidopsis thaliana upon perceiving environmental

  2. Arabidopsis CDS blastp result: AK073859 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK073859 J033073L16 At4g22260.1 alternative oxidase, putative / immutans protein (I...M) identical to IMMUTANS from Arabidopsis thaliana [gi:4138855]; contains Pfam profile PF01786 alternative oxidase 5e-21 ...

  3. Arabidopsis CDS blastp result: AK067891 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK067891 J013124H21 At4g22260.1 alternative oxidase, putative / immutans protein (I...M) identical to IMMUTANS from Arabidopsis thaliana [gi:4138855]; contains Pfam profile PF01786 alternative oxidase 1e-110 ...

  4. Arabidopsis CDS blastp result: AK241438 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK241438 J065162G03 At4g32040.1 68417.m04561 homeobox protein knotted-1 like 5 (KNAT5) / home...odomain containing protein 1 (H1) identical to homeobox protein knotted-1 like 5 (KNAT5) SP:P48002 from [Arabidopsis thaliana] 4e-98 ...

  5. Arabidopsis CDS blastp result: AK241312 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK241312 J065141L09 At4g32040.1 68417.m04561 homeobox protein knotted-1 like 5 (KNAT5) / home...odomain containing protein 1 (H1) identical to homeobox protein knotted-1 like 5 (KNAT5) SP:P48002 from [Arabidopsis thaliana] 2e-19 ...

  6. Arabidopsis CDS blastp result: AK243352 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK243352 J100060L07 At4g32040.1 68417.m04561 homeobox protein knotted-1 like 5 (KNAT5) / home...odomain containing protein 1 (H1) identical to homeobox protein knotted-1 like 5 (KNAT5) SP:P48002 from [Arabidopsis thaliana] 1e-103 ...

  7. Arabidopsis CDS blastp result: AK289177 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK289177 J100024E07 At4g32040.1 68417.m04561 homeobox protein knotted-1 like 5 (KNAT5) / home...odomain containing protein 1 (H1) identical to homeobox protein knotted-1 like 5 (KNAT5) SP:P48002 from [Arabidopsis thaliana] 4e-98 ...

  8. Arabidopsis CDS blastp result: AK119904 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK119904 002-182-A05 At3g10920.1 superoxide dismutase [Mn], mitochondrial (SODA) / manga...nese superoxide dismutase (MSD1) identical to manganese superoxide dismutase [Arabidopsis thaliana] gi|3273751|gb|AAC24832 9e-78 ...

  9. Arabidopsis CDS blastp result: AK070528 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK070528 J023060D13 At3g10920.1 superoxide dismutase [Mn], mitochondrial (SODA) / manga...nese superoxide dismutase (MSD1) identical to manganese superoxide dismutase [Arabidopsis thaliana] gi|3273751|gb|AAC24832 9e-99 ...

  10. Arabidopsis CDS blastp result: AK104030 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK104030 001-020-C01 At3g10920.1 superoxide dismutase [Mn], mitochondrial (SODA) / manga...nese superoxide dismutase (MSD1) identical to manganese superoxide dismutase [Arabidopsis thaliana] gi|3273751|gb|AAC24832 9e-99 ...

  11. Arabidopsis CDS blastp result: AK104160 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK104160 006-211-E09 At3g10920.1 superoxide dismutase [Mn], mitochondrial (SODA) / manga...nese superoxide dismutase (MSD1) identical to manganese superoxide dismutase [Arabidopsis thaliana] gi|3273751|gb|AAC24832 9e-99 ...

  12. Arabidopsis CDS blastp result: AK068433 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK068433 J013156D16 At1g20620.2 catalase 3 (SEN2) almost identical to catalase 3 SP...:Q42547, GI:3123188 from [Arabidopsis thaliana]; identical to catalase 3 (SEN2) mRNA, partial cds GI:3158369 1e-63 ...

  13. Reference: 119 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available of the Arabidopsis homolog of MSH4 (AtMSH4). We demonstrate that AtMSH4 expression can only be detected in floral tissues, consisten...chromosomes. A T-DNA insertional mutant (Atmsh4) exhibited normal vegetative growth but a severe reduction in fertility, consistent

  14. Reference: 239 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available 239 http://metadb.riken.jp/db/SciNetS_ria224i/cria224u4ria224u16015335i Bundock Paul et al. 2005 Jul. Natur...functions. An Arabidopsis hAT-like transposase is essential for plant development. 7048 282-4 16015335 2005 Jul Nature Bundock Paul|Hooykaas Paul

  15. Reference: 590 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available 590 http://metadb.riken.jp/db/SciNetS_ria224i/cria224u4ria224u17450124i Caro Elena et al. 2007 May. Nature... to root epidermis patterning in Arabidopsis. 7141 213-7 17450124 2007 May Nature Caro Elena|Castellano M Mar|Gutierrez Crisanto

  16. Arabidopsis CDS blastp result: AK241762 [KOME

    Lifescience Database Archive (English)

    Full Text Available ctor, putative / enhancer of shoot regeneration (ESR1) similar to gb|D38124 EREBP-3 from Nicotiana tabacum a...nd contains PF|00847 AP2 domain; identical to cDNA enhancer of shoot regeneration ESR1 GI:18028939, enhancer of shoot regeneration ESR1 [Arabidopsis thaliana] GI:18028940 9e-17 ...

  17. Arabidopsis CDS blastp result: AK242393 [KOME

    Lifescience Database Archive (English)

    Full Text Available ctor, putative / enhancer of shoot regeneration (ESR1) similar to gb|D38124 EREBP-3 from Nicotiana tabacum a...nd contains PF|00847 AP2 domain; identical to cDNA enhancer of shoot regeneration ESR1 GI:18028939, enhancer of shoot regeneration ESR1 [Arabidopsis thaliana] GI:18028940 3e-13 ...

  18. Arabidopsis CDS blastp result: AK242986 [KOME

    Lifescience Database Archive (English)

    Full Text Available ctor, putative / enhancer of shoot regeneration (ESR1) similar to gb|D38124 EREBP-3 from Nicotiana tabacum a...nd contains PF|00847 AP2 domain; identical to cDNA enhancer of shoot regeneration ESR1 GI:18028939, enhancer of shoot regeneration ESR1 [Arabidopsis thaliana] GI:18028940 1e-13 ...

  19. Arabidopsis CDS blastp result: AK241281 [KOME

    Lifescience Database Archive (English)

    Full Text Available ctor, putative / enhancer of shoot regeneration (ESR1) similar to gb|D38124 EREBP-3 from Nicotiana tabacum a...nd contains PF|00847 AP2 domain; identical to cDNA enhancer of shoot regeneration ESR1 GI:18028939, enhancer of shoot regeneration ESR1 [Arabidopsis thaliana] GI:18028940 1e-12 ...

  20. Reference: 223 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available 223 http://metadb.riken.jp/db/SciNetS_ria224i/cria224u4ria224u15923347i Dohmann Es... cause the cop/det/fus mutant phenotype in Arabidopsis. 7 1967-78 15923347 2005 Jul The Plant cell Dohmann Esther M N|Kuhnle Carola|Schwechheimer Claus

  1. Arabidopsis CDS blastp result: AK072001 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK072001 J013094L17 At2g22670.2 auxin-responsive protein / indoleacetic acid-induce...d protein 8 (IAA8) identical to SP|Q38826 Auxin-responsive protein IAA8 (Indoleacetic acid-induced protein 8) {Arabidopsis thaliana} 2e-11 ...

  2. Arabidopsis CDS blastp result: AK069892 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK069892 J023039N11 At2g33310.1 auxin-responsive protein / indoleacetic acid-induce...d protein 13 (IAA13) identical to SP|Q38831 Auxin-responsive protein IAA13 (Indoleacetic acid-induced protein 13) {Arabidopsis thaliana} 3e-41 ...

  3. Arabidopsis CDS blastp result: AK061037 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK061037 006-205-B07 At5g65670.2 auxin-responsive protein / indoleacetic acid-induc...ed protein 9 (IAA9) identical to SP|Q38827 Auxin-responsive protein IAA9 (Indoleacetic acid-induced protein 9) {Arabidopsis thaliana} 2e-25 ...

  4. Arabidopsis CDS blastp result: AK102396 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK102396 J033092H03 At2g22670.1 auxin-responsive protein / indoleacetic acid-induce...d protein 8 (IAA8) identical to SP|Q38826 Auxin-responsive protein IAA8 (Indoleacetic acid-induced protein 8) {Arabidopsis thaliana} 2e-50 ...

  5. Arabidopsis CDS blastp result: AK059838 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK059838 006-206-C11 At3g04730.1 auxin-responsive protein / indoleacetic acid-induc...ed protein 16 (IAA16) identical to SP|O24407 Auxin-responsive protein IAA16 (Indoleacetic acid-induced protein 16) {Arabidopsis thaliana} 8e-45 ...

  6. Arabidopsis CDS blastp result: AK061495 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK061495 006-309-C06 At2g22670.1 auxin-responsive protein / indoleacetic acid-induc...ed protein 8 (IAA8) identical to SP|Q38826 Auxin-responsive protein IAA8 (Indoleacetic acid-induced protein 8) {Arabidopsis thaliana} 3e-50 ...

  7. Arabidopsis CDS blastp result: AK099253 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK099253 J013168H04 At2g22670.1 auxin-responsive protein / indoleacetic acid-induce...d protein 8 (IAA8) identical to SP|Q38826 Auxin-responsive protein IAA8 (Indoleacetic acid-induced protein 8) {Arabidopsis thaliana} 4e-51 ...

  8. Arabidopsis CDS blastp result: AK063854 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK063854 001-122-D03 At3g04730.1 auxin-responsive protein / indoleacetic acid-induc...ed protein 16 (IAA16) identical to SP|O24407 Auxin-responsive protein IAA16 (Indoleacetic acid-induced protein 16) {Arabidopsis thaliana} 2e-22 ...

  9. Arabidopsis CDS blastp result: AK104018 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK104018 001-007-H11 At2g22670.1 auxin-responsive protein / indoleacetic acid-induc...ed protein 8 (IAA8) identical to SP|Q38826 Auxin-responsive protein IAA8 (Indoleacetic acid-induced protein 8) {Arabidopsis thaliana} 4e-51 ...

  10. Arabidopsis CDS blastp result: AK106181 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK106181 001-208-D03 At2g22670.1 auxin-responsive protein / indoleacetic acid-induc...ed protein 8 (IAA8) identical to SP|Q38826 Auxin-responsive protein IAA8 (Indoleacetic acid-induced protein 8) {Arabidopsis thaliana} 4e-51 ...

  11. Arabidopsis CDS blastp result: AK109363 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK109363 006-206-E12 At2g22670.1 auxin-responsive protein / indoleacetic acid-induc...ed protein 8 (IAA8) identical to SP|Q38826 Auxin-responsive protein IAA8 (Indoleacetic acid-induced protein 8) {Arabidopsis thaliana} 2e-51 ...

  12. Arabidopsis CDS blastp result: AK073365 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK073365 J033030K18 At3g23030.1 auxin-responsive protein / indoleacetic acid-induce...d protein 2 (IAA2) identical to SP|P49678 Auxin-responsive protein IAA2 (Indoleacetic acid-induced protein 2) {Arabidopsis thaliana} 4e-20 ...

  13. Arabidopsis CDS blastp result: AK066518 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK066518 J013070M23 At2g46990.1 auxin-responsive protein / indoleacetic acid-induce...d protein 20 (IAA20) identical to SP|O24410 Auxin-responsive protein IAA20 (Indoleacetic acid-induced protein 20) {Arabidopsis thaliana} 3e-25 ...

  14. Arabidopsis CDS blastp result: AK106121 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK106121 001-207-E11 At2g22670.1 auxin-responsive protein / indoleacetic acid-induc...ed protein 8 (IAA8) identical to SP|Q38826 Auxin-responsive protein IAA8 (Indoleacetic acid-induced protein 8) {Arabidopsis thaliana} 7e-51 ...

  15. Arabidopsis CDS blastp result: AK104802 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK104802 001-040-C05 At2g33310.1 auxin-responsive protein / indoleacetic acid-induc...ed protein 13 (IAA13) identical to SP|Q38831 Auxin-responsive protein IAA13 (Indoleacetic acid-induced protein 13) {Arabidopsis thaliana} 3e-41 ...

  16. Arabidopsis CDS blastp result: AK100988 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK100988 J023145H17 At1g63440.1 copper-exporting ATPase, putative / responsive-to-a...ntagonist 1, putative / copper-transporting ATPase, putative similar to ATP dependent copper transporter SP|Q9S7J8 [Arabidopsis thaliana] 0.0 ...

  17. Arabidopsis CDS blastp result: AK063759 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK063759 001-121-A10 At1g63440.1 copper-exporting ATPase, putative / responsive-to-...antagonist 1, putative / copper-transporting ATPase, putative similar to ATP dependent copper transporter SP|Q9S7J8 [Arabidopsis thaliana] 0.0 ...

  18. Arabidopsis CDS blastp result: AK072990 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK072990 J023144D18 At1g63440.1 copper-exporting ATPase, putative / responsive-to-a...ntagonist 1, putative / copper-transporting ATPase, putative similar to ATP dependent copper transporter SP|Q9S7J8 [Arabidopsis thaliana] 0.0 ...

  19. Arabidopsis CDS blastp result: AK287434 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK287434 J043012F24 At4g16390.1 68417.m02481 chloroplastic RNA-binding protein P67,... putative nearly identical to 67kD chloroplastic RNA-binding protein, P67 [Arabidopsis thaliana] GI:9755842 2e-27 ...

  20. Arabidopsis CDS blastp result: AK241784 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK241784 J065206N09 At4g16390.1 68417.m02481 chloroplastic RNA-binding protein P67,... putative nearly identical to 67kD chloroplastic RNA-binding protein, P67 [Arabidopsis thaliana] GI:9755842 4e-11 ...

  1. Arabidopsis CDS blastp result: AK242601 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242601 J090014G03 At4g38190.1 68417.m05391 cellulose synthase family protein similar to cellulose... synthase catalytic subunit gi:2827143 from [Arabidopsis thaliana], cellulose synthase-5 (gi:9622882) from Zea mays 0.0 ...

  2. Arabidopsis CDS blastp result: AK242601 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242601 J090014G03 At1g32180.1 68414.m03958 cellulose synthase family protein similar to cellulose... synthase catalytic subunit gi:2827143 from [Arabidopsis thaliana], cellulose synthase-9 (gi:9622890) from Zea mays 0.0 ...

  3. Arabidopsis CDS blastp result: AK121003 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK121003 J023045B21 At2g32540.1 cellulose synthase family protein similar to cellulose... synthase catalytic subunit from Arabidopsis thaliana [gi:5230423], cellulose synthase-5 from Zea mays [gi:9622882] 1e-167 ...

  4. Arabidopsis CDS blastp result: AK242585 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242585 J090010M20 At4g38190.1 68417.m05391 cellulose synthase family protein similar to cellulose... synthase catalytic subunit gi:2827143 from [Arabidopsis thaliana], cellulose synthase-5 (gi:9622882) from Zea mays 8e-63 ...

  5. Arabidopsis CDS blastp result: AK109812 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK109812 002-147-H02 At5g16910.1 cellulose synthase family protein similar to gi:2827143 cellulose... synthase catalytic subunit, Arabidopsis thaliana, gi:9622886 cellulose synthase-7 from Zea mays 5e-90 ...

  6. Arabidopsis CDS blastp result: AK242601 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242601 J090014G03 At4g23990.1 68417.m03448 cellulose synthase family protein similar to cellulose... synthase catalytic subunit from Arabidopsis thaliana [gi:5230423], cellulose synthase-5 from Zea mays [gi:9622882] 2e-26 ...

  7. Arabidopsis CDS blastp result: AK069071 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK069071 J023010H01 At2g32540.1 cellulose synthase family protein similar to cellulose... synthase catalytic subunit from Arabidopsis thaliana [gi:5230423], cellulose synthase-5 from Zea mays [gi:9622882] 1e-167 ...

  8. Arabidopsis CDS blastp result: AK242890 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242890 J090079L19 At2g32540.1 68415.m03975 cellulose synthase family protein similar to cellulose... synthase catalytic subunit from Arabidopsis thaliana [gi:5230423], cellulose synthase-5 from Zea mays [gi:9622882] 4e-47 ...

  9. Arabidopsis CDS blastp result: AK110534 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK110534 002-168-A07 At5g16910.1 cellulose synthase family protein similar to gi:2827143 cellulose... synthase catalytic subunit, Arabidopsis thaliana, gi:9622886 cellulose synthase-7 from Zea mays 1e-114 ...

  10. Arabidopsis CDS blastp result: AK242601 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242601 J090014G03 At2g32540.1 68415.m03975 cellulose synthase family protein similar to cellulose... synthase catalytic subunit from Arabidopsis thaliana [gi:5230423], cellulose synthase-5 from Zea mays [gi:9622882] 3e-31 ...

  11. Arabidopsis CDS blastp result: AK242585 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242585 J090010M20 At5g16910.1 68418.m01982 cellulose synthase family protein similar to gi:2827143 cellulo...se synthase catalytic subunit, Arabidopsis thaliana, gi:9622886 cellulose synthase-7 from Zea mays 1e-28 ...

  12. Arabidopsis CDS blastp result: AK242601 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242601 J090014G03 At4g23990.1 68417.m03448 cellulose synthase family protein similar to cellulose... synthase catalytic subunit from Arabidopsis thaliana [gi:5230423], cellulose synthase-5 from Zea mays [gi:9622882] 8e-25 ...

  13. Arabidopsis CDS blastp result: AK242890 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242890 J090079L19 At1g32180.1 68414.m03958 cellulose synthase family protein similar to cellulose... synthase catalytic subunit gi:2827143 from [Arabidopsis thaliana], cellulose synthase-9 (gi:9622890) from Zea mays 1e-126 ...

  14. Arabidopsis CDS blastp result: AK242890 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242890 J090079L19 At4g23990.1 68417.m03448 cellulose synthase family protein similar to cellulose... synthase catalytic subunit from Arabidopsis thaliana [gi:5230423], cellulose synthase-5 from Zea mays [gi:9622882] 1e-45 ...

  15. Arabidopsis CDS blastp result: AK242601 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242601 J090014G03 At4g23990.1 68417.m03448 cellulose synthase family protein similar to cellulose... synthase catalytic subunit from Arabidopsis thaliana [gi:5230423], cellulose synthase-5 from Zea mays [gi:9622882] 5e-25 ...

  16. Arabidopsis CDS blastp result: AK242585 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242585 J090010M20 At5g16910.1 68418.m01982 cellulose synthase family protein similar to gi:2827143 cellulo...se synthase catalytic subunit, Arabidopsis thaliana, gi:9622886 cellulose synthase-7 from Zea mays 2e-65 ...

  17. Arabidopsis CDS blastp result: AK242585 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242585 J090010M20 At1g32180.1 68414.m03958 cellulose synthase family protein similar to cellulose... synthase catalytic subunit gi:2827143 from [Arabidopsis thaliana], cellulose synthase-9 (gi:9622890) from Zea mays 1e-24 ...

  18. Arabidopsis CDS blastp result: AK242601 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242601 J090014G03 At2g32530.1 68415.m03974 cellulose synthase family protein similar to cellulose... synthase catalytic subunit from Arabidopsis thaliana [gi:5230423], cellulose synthase-5 from Zea mays [gi:9622882] 2e-29 ...

  19. Arabidopsis CDS blastp result: AK242585 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242585 J090010M20 At1g32180.1 68414.m03958 cellulose synthase family protein similar to cellulose... synthase catalytic subunit gi:2827143 from [Arabidopsis thaliana], cellulose synthase-9 (gi:9622890) from Zea mays 3e-66 ...

  20. Arabidopsis CDS blastp result: AK242585 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242585 J090010M20 At4g23990.1 68417.m03448 cellulose synthase family protein similar to cellulose... synthase catalytic subunit from Arabidopsis thaliana [gi:5230423], cellulose synthase-5 from Zea mays [gi:9622882] 1e-124 ...

  1. Arabidopsis CDS blastp result: AK105393 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK105393 001-123-B04 At5g16910.1 cellulose synthase family protein similar to gi:2827143 cellulose... synthase catalytic subunit, Arabidopsis thaliana, gi:9622886 cellulose synthase-7 from Zea mays 0.0 ...

  2. Arabidopsis CDS blastp result: AK242601 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242601 J090014G03 At2g32540.1 68415.m03975 cellulose synthase family protein similar to cellulose... synthase catalytic subunit from Arabidopsis thaliana [gi:5230423], cellulose synthase-5 from Zea mays [gi:9622882] 2e-45 ...

  3. Arabidopsis CDS blastp result: AK242890 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242890 J090079L19 At5g16910.1 68418.m01982 cellulose synthase family protein similar to gi:2827143 cellulo...se synthase catalytic subunit, Arabidopsis thaliana, gi:9622886 cellulose synthase-7 from Zea mays 1e-130 ...

  4. Arabidopsis CDS blastp result: AK242890 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242890 J090079L19 At4g38190.1 68417.m05391 cellulose synthase family protein similar to cellulose... synthase catalytic subunit gi:2827143 from [Arabidopsis thaliana], cellulose synthase-5 (gi:9622882) from Zea mays 1e-125 ...

  5. Arabidopsis CDS blastp result: AK061162 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK061162 006-209-A01 At2g32540.1 cellulose synthase family protein similar to cellulose... synthase catalytic subunit from Arabidopsis thaliana [gi:5230423], cellulose synthase-5 from Zea mays [gi:9622882] 3e-35 ...

  6. Arabidopsis CDS blastp result: AK242585 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242585 J090010M20 At2g32540.1 68415.m03975 cellulose synthase family protein similar to cellulose... synthase catalytic subunit from Arabidopsis thaliana [gi:5230423], cellulose synthase-5 from Zea mays [gi:9622882] 4e-98 ...

  7. Arabidopsis CDS blastp result: AK242601 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242601 J090014G03 At5g16910.1 68418.m01982 cellulose synthase family protein similar to gi:2827143 cellulo...se synthase catalytic subunit, Arabidopsis thaliana, gi:9622886 cellulose synthase-7 from Zea mays 0.0 ...

  8. Arabidopsis CDS blastp result: AK242585 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242585 J090010M20 At2g32530.1 68415.m03974 cellulose synthase family protein similar to cellulose... synthase catalytic subunit from Arabidopsis thaliana [gi:5230423], cellulose synthase-5 from Zea mays [gi:9622882] 8e-98 ...

  9. Arabidopsis CDS blastp result: AK242585 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242585 J090010M20 At4g38190.1 68417.m05391 cellulose synthase family protein similar to cellulose... synthase catalytic subunit gi:2827143 from [Arabidopsis thaliana], cellulose synthase-5 (gi:9622882) from Zea mays 4e-27 ...

  10. Arabidopsis CDS blastp result: AK060286 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK060286 001-006-C08 At2g32540.1 cellulose synthase family protein similar to cellulose... synthase catalytic subunit from Arabidopsis thaliana [gi:5230423], cellulose synthase-5 from Zea mays [gi:9622882] 6e-78 ...

  11. Arabidopsis CDS blastp result: AK242890 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242890 J090079L19 At2g32530.1 68415.m03974 cellulose synthase family protein similar to cellulose... synthase catalytic subunit from Arabidopsis thaliana [gi:5230423], cellulose synthase-5 from Zea mays [gi:9622882] 4e-50 ...

  12. Arabidopsis CDS blastp result: AK242601 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242601 J090014G03 At2g32530.1 68415.m03974 cellulose synthase family protein similar to cellulose... synthase catalytic subunit from Arabidopsis thaliana [gi:5230423], cellulose synthase-5 from Zea mays [gi:9622882] 5e-48 ...

  13. Arabidopsis CDS blastp result: AK058440 [KOME

    Lifescience Database Archive (English)

    Full Text Available 20S proteasome beta subunit PBB1 (PBB1) GB:AAC32066 [Arabidopsis thaliana] (Genetics 149 (2), 677-692 (1998)); contains Pfam profile: PF00227 proteasome A-type and B-type; 1e-92 ...

  14. Reference: 671 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available with distinct vegetative or constitutive and reproductive expression patterns. In Arabidopsis thaliana, ectopic...ractions among the major classes of actins and ABPs, we ectopically coexpressed reproductive profilin (PRF4)...coexpression of these reproductive, but not vegetative, ABP isovariants suppressed the ectopic

  15. Extended Schmidt law holds for faint dwarf irregular galaxies

    Science.gov (United States)

    Roychowdhury, Sambit; Chengalur, Jayaram N.; Shi, Yong

    2017-12-01

    Context. The extended Schmidt law (ESL) is a variant of the Schmidt which relates the surface densities of gas and star formation, with the surface density of stellar mass added as an extra parameter. Although ESL has been shown to be valid for a wide range of galaxy properties, its validity in low-metallicity galaxies has not been comprehensively tested. This is important because metallicity affects the crucial atomic-to-molecular transition step in the process of conversion of gas to stars. Aims: We empirically investigate for the first time whether low metallicity faint dwarf irregular galaxies (dIrrs) from the local universe follow the ESL. Here we consider the "global" law where surface densities are averaged over the galactic discs. dIrrs are unique not only because they are at the lowest end of mass and star formation scales for galaxies, but also because they are metal-poor compared to the general population of galaxies. Methods: Our sample is drawn from the Faint Irregular Galaxy GMRT Survey (FIGGS) which is the largest survey of atomic hydrogen in such galaxies. The gas surface densities are determined using their atomic hydrogen content. The star formation rates are calculated using GALEX far ultraviolet fluxes after correcting for dust extinction, whereas the stellar surface densities are calculated using Spitzer 3.6 μm fluxes. The surface densities are calculated over the stellar discs defined by the 3.6 μm images. Results: We find dIrrs indeed follow the ESL. The mean deviation of the FIGGS galaxies from the relation is 0.01 dex, with a scatter around the relation of less than half that seen in the original relation. In comparison, we also show that the FIGGS galaxies are much more deviant when compared to the "canonical" Kennicutt-Schmidt relation. Conclusions: Our results help strengthen the universality of the ESL, especially for galaxies with low metallicities. We suggest that models of star formation in which feedback from previous generations

  16. Irregular Saturnian Moon Lightcurves from Cassini-ISS Observations: Update

    Science.gov (United States)

    Denk, Tilmann; Mottola, S.

    2013-10-01

    Cassini ISS-NAC observations of the irregular moons of Saturn revealed various physical information on these objects. 16 synodic rotational periods: Hati (S43): 5.45 h; Mundilfari (S25): 6.74 h; Suttungr (S23): ~7.4 h; Kari (S45): 7.70 h; Siarnaq (S29): 10.14 h; Tarvos (S21): 10.66 h; Ymir (S19, sidereal period): 11.92220 h ± 0.1 s; Skathi (S27): ~12 h; Hyrrokkin (S44): 12.76 h; Ijiraq (S22): 13.03 h; Albiorix (S26): 13.32 h; Bestla (S39): 14.64 h; Bebhionn (S37): ~15.8 h; Kiviuq (S24): 21.82 h; Thrymr (S30): ~27 h; Erriapus (S28): ~28 h. The average period for the prograde-orbiting moons is ~16 h, for the retrograde moons ~11½ h (includes Phoebe's 9.2735 h from Bauer et al., AJ, 2004). Phase-angle dependent behavior of lightcurves: The phase angles of the observations range from 2° to 105°. The lightcurves which were obtained at low phase (<40°) show the 2-maxima/ 2-minima pattern expected for this kind of objects. At higher phases, more complicated lightcurves emerge, giving rough indications on shapes. Ymir pole and shape: For satellite Ymir, a convex-hull shape model and the pole-axis orientation have been derived. Ymir's north pole points toward λ = 230°±180°, β = -85°±10°, or RA = 100°±20°, Dec = -70°±10°. This is anti-parallel to the rotation axes of the major planets, indicating that Ymir not just orbits, but also rotates in a retrograde sense. The shape of Ymir resembles a triangular prism with edge lengths of ~20, ~24, and ~25 km. The ratio between the longest 25 km) and shortest axis (pole axis, ~15 km) is ~1.7. Erriapus seasons: The pole direction of object Erriapus has probably a low ecliptic latitude. This gives this moon seasons similar to the Uranian regular moons with periods where the sun stands very high in the sky over many years, and with years-long periods of permanent night. Hati density: The rotational frequency of the fastest rotator (Hati) is close to the frequency where the object would lose material from the surface if

  17. Comparison of the spaceflight transcriptome of four commonly used Arabidopsis thaliana ecotypes

    Data.gov (United States)

    National Aeronautics and Space Administration — This experiment compared the spaceflight transcriptomes of four commonly used natural variants (ecotypes) of Arabidopsis thaliana using RNAseq. In nature Arabidopsis...

  18. ON THE STAR FORMATION LAW FOR SPIRAL AND IRREGULAR GALAXIES

    Energy Technology Data Exchange (ETDEWEB)

    Elmegreen, Bruce G., E-mail: bge@us.ibm.com [IBM Research Division, T.J. Watson Research Center, 1101 Kitchawan Road, Yorktown Heights, NY 10598 (United States)

    2015-12-01

    A dynamical model for star formation on a galactic scale is proposed in which the interstellar medium is constantly condensing to star-forming clouds on the dynamical time of the average midplane density, and the clouds are constantly being disrupted on the dynamical timescale appropriate for their higher density. In this model, the areal star formation rate scales with the 1.5 power of the total gas column density throughout the main regions of spiral galaxies, and with a steeper power, 2, in the far outer regions and in dwarf irregular galaxies because of the flaring disks. At the same time, there is a molecular star formation law that is linear in the main and outer parts of disks and in dIrrs because the duration of individual structures in the molecular phase is also the dynamical timescale, canceling the additional 0.5 power of surface density. The total gas consumption time scales directly with the midplane dynamical time, quenching star formation in the inner regions if there is no accretion, and sustaining star formation for ∼100 Gyr or more in the outer regions with no qualitative change in gas stability or molecular cloud properties. The ULIRG track follows from high densities in galaxy collisions.

  19. Influence of Ionospheric Irregularities on GNSS Remote Sensing

    Directory of Open Access Journals (Sweden)

    M. V. Tinin

    2015-01-01

    Full Text Available We have used numerical simulation to study the effects of ionospheric irregularities on accuracy of global navigation satellite system (GNSS measurements, using ionosphere-free (in atmospheric research and geometry-free (in ionospheric research dual-frequency phase combinations. It is known that elimination of these effects from multifrequency GNSS measurements is handi-capped by diffraction effects during signal propagation through turbulent ionospheric plasma with the inner scale being smaller than the Fresnel radius. We demonstrated the possibility of reducing the residual ionospheric error in dual-frequency GNSS remote sensing in ionosphere-free combination by Fresnel inversion. The inversion parameter, the distance to the virtual screen, may be selected from the minimum of amplitude fluctuations. This suggests the possibility of improving the accuracy of GNSS remote sensing in meteorology. In the study of ionospheric disturbances with the aid of geometry-free combination, the Fresnel inversion eliminates only the third-order error. To eliminate the random TEC component which, like the measured average TEC, is the first-order correction, we should use temporal filtering (averaging.

  20. Timing irregularities of PSR J1705-1906

    Science.gov (United States)

    Liu, Y. L.; Yuan, J. P.; Wang, J. B.; Liu, X. W.; Wang, N.; Yuen, R.

    2018-05-01

    Timing analysis of PSR J1705-1906 using data from Nanshan 25-m and Parkes 64-m radio telescopes, which span over fourteen years, shows that the pulsar exhibits significant proper motion, and rotation instability. We updated the astrometry parameters and the spin parameters of the pulsar. In order to minimize the effect of timing irregularities on measuring its position, we employ the Cholesky method to analyse the timing noise. We obtain the proper motion of -77(3) mas yr-1 in right ascension and -38(29) mas yr-1 in declination. The power spectrum of timing noise is analyzed for the first time, which gives the spectral exponent α =-5.2 for the power-law model indicating that the fluctuations in spin frequency and spin-down rate dominate the red noise. We detect two small glitches from this pulsar with fractional jump in spin frequency of Δ ν /ν ˜ 2.9 × 10^{-10} around MJD 55199 and Δ ν /ν ˜ 2.7× 10^{-10} around MJD 55953. Investigations of pulse profile at different time segments suggest no significant changes in the pulse profiles around the two glitches.

  1. Distributed sensing of ionospheric irregularities with a GNSS receiver array

    Science.gov (United States)

    Su, Yang; Datta-Barua, Seebany; Bust, Gary S.; Deshpande, Kshitija B.

    2017-08-01

    We present analysis methods for studying the structuring and motion of ionospheric irregularities at the subkilometer scale sizes that produce L band scintillations. Spaced-receiver methods are used for Global Navigation Satellite System (GNSS) receivers' phase measurements over approximately subkilometer to kilometer length baselines for the first time. The quantities estimated by these techniques are plasma drift velocity, diffraction anisotropy magnitude and orientation, and characteristic velocity. Uncertainties are quantified by ensemble simulation of noise on the phase signals carried through to the observations of the spaced-receiver linear system. These covariances are then propagated through to uncertainties on drifts through linearization about the estimated values of the state. Five receivers of SAGA, the Scintillation Auroral Global Positioning System (GPS) Array, provide 100 Hz power and phase data for each channel at L1 frequency. The array is sited in the auroral zone at Poker Flat Research Range, Alaska. A case study of a single scintillating satellite observed by the array is used to demonstrate the spaced-receiver and uncertainty estimation process. A second case study estimates drifts as measured by multiple scintillating channels. These scintillations are correlated with auroral activity, based on all-sky camera images. Measurements and uncertainty estimates made over a 30 min period are compared to a collocated incoherent scatter radar and show good agreement in horizontal drift speed and direction during periods of scintillation for which the characteristic velocity is less than the drift velocity.

  2. Metallicity of Young and Old Stars in Irregular Galaxies

    Science.gov (United States)

    Tikhonov, N. A.

    2018-01-01

    Based on archived images obtained with the Hubble Space Telescope, stellar photometry for 105 irregular galaxies has been conducted. We have shown the red supergiant and giant branches in the obtained Hertzsprung-Russel diagrams. Using the TRGB method, distances to galaxies and metallicity of red giants have been determined. The color index ( V - I) of the supergiant branch at the luminosity level M I = -7 was chosen as the metallicity index of red supergiants. For the galaxies under study, the diagrams have been built, in which the correlation can be seen between the luminosity of galaxies ( M B ) and metallicity of red giants and supergiants. The main source of variance of the results in the obtained diagrams is, in our opinion, uncertainty inmeasurements of galaxy luminosities and star-forming outburst. The relation between metallicity of young and old stars shows that main enrichment of galaxies with metals has taken place in the remote past. Deviations of some galaxies in the obtained relation can possibly be explained with the fall of the intergalactic gas on them, although, this inconsiderably affects metallicities of the stellar content.

  3. Climatic irregular staircases: generalized acceleration of global warming.

    Science.gov (United States)

    De Saedeleer, Bernard

    2016-01-27

    Global warming rates mentioned in the literature are often restricted to a couple of arbitrary periods of time, or of isolated values of the starting year, lacking a global view. In this study, we perform on the contrary an exhaustive parametric analysis of the NASA GISS LOTI data, and also of the HadCRUT4 data. The starting year systematically varies between 1880 and 2002, and the averaging period from 5 to 30 yr - not only decades; the ending year also varies . In this way, we uncover a whole unexplored space of values for the global warming rate, and access the full picture. Additionally, stairstep averaging and linear least squares fitting to determine climatic trends have been sofar exclusive. We propose here an original hybrid method which combines both approaches in order to derive a new type of climatic trend. We find that there is an overall acceleration of the global warming whatever the value of the averaging period, and that 99.9% of the 3029 Earth's climatic irregular staircases are rising. Graphical evidence is also given that choosing an El Niño year as starting year gives lower global warming rates - except if there is a volcanic cooling in parallel. Our rates agree and generalize several results mentioned in the literature.

  4. Propagating star formation and irregular structure in spiral galaxies

    International Nuclear Information System (INIS)

    Mueller, M.W.; Arnett, W.D.

    1976-01-01

    A simple model is proposed which describes the irregular optical appearance often seen in late-type spiral galaxies. If high-mass stars produce spherical shock waves which induce star formation, new high-mass stars will be born which, in turn, produce new shock waves. When this process operates in a differentially rotating disk, our numerical model shows that large-scale spiral-shaped regions of star formation are built up. The structure is seen to be most sensitive to a parameter which governs how often a region of the interstellar medium can undergo star formation. For a proper choice of this parameter, large-scale features disappear before differential rotation winds them up. New spiral features continuously form, so some spiral structure is seen indefinitely. The structure is not the classical two-armed symmetric spiral pattern which the density-wave theory attempts to explain, but it is asymmetric and disorderly.The mechanism of propagating star formation used in our model is consistent with observations which connect young OB associations with expanding shells of gas. We discuss the possible interaction of this mechanism with density waves

  5. Effects of Irregular Bridge Columns and Feasibility of Seismic Regularity

    Science.gov (United States)

    Thomas, Abey E.

    2018-05-01

    Bridges with unequal column height is one of the main irregularities in bridge design particularly while negotiating steep valleys, making the bridges vulnerable to seismic action. The desirable behaviour of bridge columns towards seismic loading is that, they should perform in a regular fashion, i.e. the capacity of each column should be utilized evenly. But, this type of behaviour is often missing when the column heights are unequal along the length of the bridge, allowing short columns to bear the maximum lateral load. In the present study, the effects of unequal column height on the global seismic performance of bridges are studied using pushover analysis. Codes such as CalTrans (Engineering service center, earthquake engineering branch, 2013) and EC-8 (EN 1998-2: design of structures for earthquake resistance. Part 2: bridges, European Committee for Standardization, Brussels, 2005) suggests seismic regularity criterion for achieving regular seismic performance level at all the bridge columns. The feasibility of adopting these seismic regularity criterions along with those mentioned in literatures will be assessed for bridges designed as per the Indian Standards in the present study.

  6. Weighted statistical parameters for irregularly sampled time series

    Science.gov (United States)

    Rimoldini, Lorenzo

    2014-01-01

    Unevenly spaced time series are common in astronomy because of the day-night cycle, weather conditions, dependence on the source position in the sky, allocated telescope time and corrupt measurements, for example, or inherent to the scanning law of satellites like Hipparcos and the forthcoming Gaia. Irregular sampling often causes clumps of measurements and gaps with no data which can severely disrupt the values of estimators. This paper aims at improving the accuracy of common statistical parameters when linear interpolation (in time or phase) can be considered an acceptable approximation of a deterministic signal. A pragmatic solution is formulated in terms of a simple weighting scheme, adapting to the sampling density and noise level, applicable to large data volumes at minimal computational cost. Tests on time series from the Hipparcos periodic catalogue led to significant improvements in the overall accuracy and precision of the estimators with respect to the unweighted counterparts and those weighted by inverse-squared uncertainties. Automated classification procedures employing statistical parameters weighted by the suggested scheme confirmed the benefits of the improved input attributes. The classification of eclipsing binaries, Mira, RR Lyrae, Delta Cephei and Alpha2 Canum Venaticorum stars employing exclusively weighted descriptive statistics achieved an overall accuracy of 92 per cent, about 6 per cent higher than with unweighted estimators.

  7. Irregular persistent activity induced by synaptic excitatory feedback

    Directory of Open Access Journals (Sweden)

    Francesca Barbieri

    2007-11-01

    Full Text Available Neurophysiological experiments on monkeys have reported highly irregular persistent activity during the performance of an oculomotor delayed-response task. These experiments show that during the delay period the coefficient of variation (CV of interspike intervals (ISI of prefrontal neurons is above 1, on average, and larger than during the fixation period. In the present paper, we show that this feature can be reproduced in a network in which persistent activity is induced by excitatory feedback, provided that (i the post-spike reset is close enough to threshold , (ii synaptic efficacies are a non-linear function of the pre-synaptic firing rate. Non-linearity between presynaptic rate and effective synaptic strength is implemented by a standard short-term depression mechanism (STD. First, we consider the simplest possible network with excitatory feedback: a fully connected homogeneous network of excitatory leaky integrate-and-fire neurons, using both numerical simulations and analytical techniques. The results are then confirmed in a network with selective excitatory neurons and inhibition. In both the cases there is a large range of values of the synaptic efficacies for which the statistics of firing of single cells is similar to experimental data.

  8. "Needed Not Wanted": An Interdisciplinary Examination of the Work-Related Challenges Faced by Irregular Migrants

    Science.gov (United States)

    Marfleet, Philip; Blustein, David L.

    2011-01-01

    Using an integrative perspective drawn from vocational psychology and migration studies, this article explores the lives of irregular migrants, which represents a unique aspect of work-based migration. Irregular migrants are those individuals who travel from regions without much work to states that offer some means of employment, without formal…

  9. Lateralized effects of orthographical irregularity and auditory memory load on the kinematics of transciption typewriting

    NARCIS (Netherlands)

    Bloemsaat, J.G.; Galen, G.P. van; Meulenbroek, R.G.J.

    2003-01-01

    This study investigated the combined effects of orthographical irregularity and auditory memory load on the kinematics of finger movements in a transcription-typewriting task. Eight right-handed touch-typists were asked to type 80 strings of ten seven-letter words. In half the trials an irregularly

  10. The Relationships among Cognitive Correlates and Irregular Word, Non-Word, and Word Reading

    Science.gov (United States)

    Abu-Hamour, Bashir; University, Mu'tah; Urso, Annmarie; Mather, Nancy

    2012-01-01

    This study explored four hypotheses: (a) the relationships among rapid automatized naming (RAN) and processing speed (PS) to irregular word, non-word, and word reading; (b) the predictive power of various RAN and PS measures, (c) the cognitive correlates that best predicted irregular word, non-word, and word reading, and (d) reading performance of…

  11. Influence of initial stress, irregularity and heterogeneity on Love-type ...

    Indian Academy of Sciences (India)

    The present paper deals with the propagation of Love-type wave in an initially stressed irregular vertically heterogeneous layer lying over an initially stressed isotropic layer and an initially stressed isotropic half- space. Two different types of irregularities, viz., rectangular and parabolic, are considered at the interface.

  12. Crime among irregular immigrants and the influence of internal border control

    NARCIS (Netherlands)

    Leerkes, A.S.; Engbersen, G.; Leun, van der J.P.

    2012-01-01

    Abstract Both the number of crime suspects without legal status and the number of irregular or undocumented immigrants held in detention facilities increased substantially in theNetherlands between 1997 and 2003. In this period, theDutch state increasingly attempted to exclude irregular immigrants

  13. Crime among irregular immigrants and the influence of internal border control

    NARCIS (Netherlands)

    A.S. Leerkes (Arjen); G.B.M. Engbersen (Godfried); J.P. van der Leun (Joanne)

    2012-01-01

    textabstractBoth the number of crime suspects without legal status and the number of irregular or undocumented immigrants held in detention facilities increased substantially in theNetherlands between 1997 and 2003. In this period, theDutch state increasingly attempted to exclude irregular

  14. Breaking Down Anonymity: Digital surveillance on irregular migrants in Germany and the Netherlands

    NARCIS (Netherlands)

    D.W.J. Broeders (Dennis)

    2009-01-01

    textabstractThe presence of irregular migrants causes a tough problem for policy makers. Political and popular aversion against the presence of irregular migrants has mounted in most West-European societies for years, yet their presence remains. Their exact numbers are obviously unknown - only

  15. Dynamics of long-period irregular pulsations in high latitudes during strong magnetic storms

    International Nuclear Information System (INIS)

    Kurazhkovskaya, N.A.; Klajn, B.I.

    1995-01-01

    Effects of strong magnetic storms within np type high-latitudinal long-period irregular pulsations at Mirny studied using data obtained at observatory of the magnetosphere south hemisphere. Variation of long-period irregular pulsation amplitude is shown to depend essentially on duration of storm initial phase and on the nature of solar wind heterogeneity enabling growth of strong storm. 14 refs

  16. Spectral classification of medium-scale high-latitude F region plasma density irregularities

    International Nuclear Information System (INIS)

    Singh, M.; Rodriguez, P.; Szuszczewicz, E.P.; Sachs Freeman Associates, Bowie, MD)

    1985-01-01

    The high-latitude ionosphere represents a highly structured plasma. Rodriguez and Szuszczewicz (1984) reported a wide range of plasma density irregularities (150 km to 75 m) at high latitudes near 200 km. They have shown that the small-scale irregularities (7.5 km to 75 m) populated the dayside oval more often than the other phenomenological regions. It was suggested that in the lower F region the chemical recombination is fast enough to remove small-scale irregularities before convection can transport them large distances, leaving structured particle precipitation as the dominant source term for irregularities. The present paper provides the results of spectral analyses of pulsed plasma probe data collected in situ aboard the STP/S3-4 satellite during the period March-September 1978. A quantitative description of irregularity spectra in the high-latitude lower F region plasma density is given. 22 references

  17. Significance of scatter radar studies of E and F region irregularities at high latitudes

    International Nuclear Information System (INIS)

    Greenwald, R.A.

    1983-01-01

    This chapter considers the mechanisms by which electron density irregularities may be generated in the high latitude ionosphere and the techniques through which they are observed with ground base radars. The capabilities of radars used for studying these irregularities are compared with the capabilities of radars used for incoherent scatter measurements. The use of irregularity scatter techniques for dynamic studies of larger scale structured phenomena is discussed. Topics considered include E-region irregularities, observations with auroral radars, plasma drifts associated with a westward travelling surge, and ionospheric plasma motions associated with resonant waves. It is shown why high latitude F-region irregularity studies must be made in the HF frequency band (3-30 MHz). The joint use of the European Incoherent Scatter Association (EISCAT), STARE and SAFARI facilities is examined, and it is concluded that the various techniques will enhance each other and provide a better understanding of the various processes being studied

  18. Arabidopsis: an adequate model for dicot root systems?

    Directory of Open Access Journals (Sweden)

    Richard W Zobel

    2016-02-01

    Full Text Available The Arabidopsis root system is frequently considered to have only three classes of root: primary, lateral, and adventitious. Research with other plant species has suggested up to 8 different developmental/functional classes of root for a given plant root system. If Arabidopsis has only three classes of root, it may not be an adequate model for eudicot plant root systems. Recent research, however, can be interpreted to suggest that pre-flowering Arabidopsis does have at least five (5 of these classes of root. This then suggests that Arabidopsis root research can be considered an adequate model for eudicot plant root systems.

  19. New Opportunities for Remote Sensing Ionospheric Irregularities by Fitting Scintillation Spectra

    Science.gov (United States)

    Carrano, C. S.; Rino, C. L.; Groves, K. M.

    2017-12-01

    In a recent paper, we presented a phase screen theory for the spectrum of intensity scintillations when the refractive index irregularities follow a two-component power law [Carrano and Rino, DOI: 10.1002/2015RS005903]. More recently we have investigated the inverse problem, whereby phase screen parameters are inferred from scintillation time series. This is accomplished by fitting the spectrum of intensity fluctuations with a parametrized theoretical model using Maximum Likelihood (ML) methods. The Markov-Chain Monte-Carlo technique provides a-posteriori errors and confidence intervals. The Akaike Information Criterion (AIC) provides justification for the use of one- or two-component irregularity models. We refer to this fitting as Irregularity Parameter Estimation (IPE) since it provides a statistical description of the irregularities from the scintillations they produce. In this talk, we explore some new opportunities for remote sensing ionospheric irregularities afforded by IPE. Statistical characterization of irregularities and the plasma bubbles in which they are embedded provides insight into the development of the underlying instability. In a companion paper by Rino et al., IPE is used to interpret scintillation due to simulated EPB structure. IPE can be used to reconcile multi-frequency scintillation observations and to construct high fidelity scintillation simulation tools. In space-to-ground propagation scenarios, for which an estimate of the distance to the scattering region is available a-priori, IPE enables retrieval of zonal irregularity drift. In radio occultation scenarios, the distance to the irregularities is generally unknown but IPE enables retrieval of Fresnel frequency. A geometric model for the effective scan velocity maps Fresnel frequency to Fresnel scale, yielding the distance to the irregularities. We demonstrate this approach by geolocating irregularities observed by the CORISS instrument onboard the C/NOFS satellite.

  20. Irregular Morphing for Real-Time Rendering of Large Terrain

    Directory of Open Access Journals (Sweden)

    S. Kalem

    2016-06-01

    Full Text Available The following paper proposes an alternative approach to the real-time adaptive triangulation problem. A new region-based multi-resolution approach for terrain rendering is described which improves on-the-fly the distribution of the density of triangles inside the tile after selecting appropriate Level-Of-Detail by an adaptive sampling. This proposed approach organizes the heightmap into a QuadTree of tiles that are processed independently. This technique combines the benefits of both Triangular Irregular Network approach and region-based multi-resolution approach by improving the distribution of the density of triangles inside the tile. Our technique morphs the initial regular grid of the tile to deformed grid in order to minimize approximation error. The proposed technique strives to combine large tile size and real-time processing while guaranteeing an upper bound on the screen space error. Thus, this approach adapts terrain rendering process to local surface characteristics and enables on-the-fly handling of large amount of terrain data. Morphing is based-on the multi-resolution wavelet analysis. The use of the D2WT multi-resolution analysis of the terrain height-map speeds up processing and permits to satisfy an interactive terrain rendering. Tests and experiments demonstrate that Haar B-Spline wavelet, well known for its properties of localization and its compact support, is suitable for fast and accurate redistribution. Such technique could be exploited in client-server architecture for supporting interactive high-quality remote visualization of very large terrain.

  1. Feedback Limiting the Coastal Response to Irregularities in Shelf Bathymetry

    Science.gov (United States)

    List, J. H.; Benedet, L.

    2007-12-01

    Observations and engineering studies have shown that non-uniform inner shelf bathymetry can influence longshore sediment transport gradients and create patterns of shoreline change. One classic example is from Grand Isle, Louisiana, where two offshore borrow pits caused two zones of shoreline accretion landward of the pits. In addition to anthropogenic cases, many natural situations exist in which irregularities in coastal planform are thought to result from offshore shoals or depressions. Recent studies using the hydrodynamic model Delft3D have successfully simulated the observed nearshore erosion and accretion patterns landward of an inner shelf borrow pit. An analysis of the momentum balance in a steady-state simulation has demonstrated that both alongshore pressure gradients (due to alongshore variations in wave setup) and radiation stress gradients (terms relevant to alongshore forcing) are important for forcing the initial pattern of nearshore sedimentation in response to the borrow pit. The response of the coast to non-uniform inner shelf bathymetry appears to be limited, however, because observed shoreline undulations are often rather subtle. (An exception may exist in the case of a very high angle wave climate.) Therefore, feedbacks in processes must exist such that growth of the shoreline salient itself modifies the transport processes in a way that limits further growth (assuming the perturbation in inner shelf bathymetry itself remains unchanged). Examination of the Delft3D momentum balance for an inner shelf pit test case demonstrates that after a certain degree of morphologic development the forcing associated with the well-known shoreline smoothing process (a.k.a., diffusion) counteracts the forcing associated with the inner shelf pit, producing a negative feedback which arrests further growth of the shoreline salient. These results provide insights into the physical processes that control shoreline changes behind inner shelf bathymetric anomalies (i

  2. TINITALY/01: a new Triangular Irregular Network of Italy

    Directory of Open Access Journals (Sweden)

    M. T. Pareschi

    2007-06-01

    Full Text Available A new Digital Elevation Model (DEM of the natural landforms of Italy is presented. A methodology is discussed to build a DEM over wide areas where elevation data from non-homogeneous (in density and accuracy input sources are available. The input elevation data include contour lines and spot heights derived from the Italian Regional topographic maps, satellite-based global positioning system points, ground based and radar altimetry data. Owing to the great heterogeneity of the input data density, the DEM format that better preserves the original accuracy is a Triangular Irregular Network (TIN. A Delaunay-based TIN structure is improved by using the DEST algorithm that enhances input data by evaluating inferred break-lines. Accordingly to this approach, biased distributions in slopes and elevations are absent. To prevent discontinuities at the boundary between regions characterized by data with different resolution a cubic Hermite blending weight S-shaped function is adopted. The TIN of Italy consists of 1.39×109 triangles. The average triangle area ranges from 12 to about 13000 m2 accordingly to different morphologies and different sources. About 50% of the model has a local average triangle area <500 m2. The vertical accuracy of the obtained DEM is evaluated by more than 200000 sparse control points. The overall Root Mean Square Error (RMSE is less than 3.5 m. The obtained national-scale DEM constitutes an useful support to carry out accurate geomorphological and geological investigations over large areas. The problem of choosing the best step size in deriving a grid from a TIN is then discussed and a method to quantify the loss of vertical information is presented as a function of the grid step. Some examples of DEM application are outlined. Under request, an high resolution stereo image database of the whole Italian territory (derived from the presented DEM is available to browse via internet.

  3. Periods, poles, and shapes of Saturn's irregular moons

    Science.gov (United States)

    Denk, Tilmann; Mottola, Stefano

    2016-10-01

    We report rotational-lightcurve observations of irregular moons of Saturn based on disk-integrated observations with the Narrow-Angle Camera of the Cassini spacecraft. From 24 measured rotation periods, 20 are now known with an accuracy of ~2% or better. The numbers are as follows (in hours; an '*' marks the less reliable periods): Hati 5.42; Mundilfari 6.74; Loge 6.94*; Skoll 7.26; Kari 7.70; Suttungr 7.82*, Bergelmir 8.13; Phoebe 9.274; Siarnaq 10.188; Narvi 10.21; Tarvos 10.69; Skathi 11.30; Ymir 11.922; Hyrrokkin 12.76; Greip 12.79*; Ijiraq 13.03; Albiorix 13.32; Bestla 14.624; Bebhionn 16.40; Paaliaq 18.75; Kiviuq 21.96; Erriapus 28.15; Thrymr 35 or >45* Tarqeq 76.8.More recent data strengthen the notion that objects in orbits with an inclination supplemental angle i' > 27° have significantly slower spin rates than those at i' 27°, Siarnaq, stands opposed to at least eight objects with faster spins and i' 27° bin contains all nine known prograde moons and four retrograde objects.A total of 25 out of 38 known outer moons has been observed with Cassini, and there is no chance to observe the 13 missing objects until end-of-mission. However, all unobserved objects are part of the i' 27° are known, and none of them is a fast rotator, with no exception.Several objects were observed repeatedly to determine pole directions, sidereal periods, and convex shapes. A few lightcurves have been observed to show three maxima and three minima even at low phase angles, suggesting objects with a triangular equatorial cross-section. Some objects with 2 maxima/ 2 minima are probably quite elongated. One moon even shows lightcurves with 4 maxima/ 4 minima.

  4. THE MEASUREMENT METHODOLOGY IMPROVEMENT OF THE HORIZONTAL IRREGULARITIES IN PLAN

    Directory of Open Access Journals (Sweden)

    O. M. Patlasov

    2015-08-01

    Full Text Available Purpose. Across the track superstructure (TSS there are structures where standard approach to the decision on the future of their operation is not entirely correct or acceptable. In particular, it concerns the track sections which are sufficiently quickly change their geometric parameters: the radius of curvature, angle of rotation, and the like. As an example, such portions of TSS may include crossovers where their component is within the so-called connecting part, which at a sufficiently short length, substantially changes curvature. The estimation of the position in terms of a design on the basis of the existing technique (by the difference in the adjacent arrows bending is virtually impossible. Therefore it is proposed to complement and improve the methodology for assessing the situation of the curve in plan upon difference in the adjacent versine. Methodology. The possible options for measuring horizontal curves in the plan were analyzed. The most adequate method, which does not contradict existing on the criterion of the possibility of using established standards was determined. The ease of measurement and calculation was took into account. Findings. Qualitative and quantitative verification of the proposed and existing methods showed very good agreement of the measurement results. This gives grounds to assert that this methodology can be recommended to the workers of track facilities in the assessment of horizontal irregularities in plan not only curves, but also within the connecting part of switch congresses. Originality. The existing method of valuation of the geometric position of the curves in the plan was improved. It does not create new regulations, and all results are evaluated by existing norms. Practical value. The proposed technique makes it possible, without creating a new regulatory framework, to be attached to existing one, and expanding the boundaries of its application. This method can be used not only for ordinary curves

  5. Contribution of tropical instability waves to ENSO irregularity

    Science.gov (United States)

    Holmes, Ryan M.; McGregor, Shayne; Santoso, Agus; England, Matthew H.

    2018-05-01

    Tropical instability waves (TIWs) are a major source of internally-generated oceanic variability in the equatorial Pacific Ocean. These non-linear phenomena play an important role in the sea surface temperature (SST) budget in a region critical for low-frequency modes of variability such as the El Niño-Southern Oscillation (ENSO). However, the direct contribution of TIW-driven stochastic variability to ENSO has received little attention. Here, we investigate the influence of TIWs on ENSO using a 1/4° ocean model coupled to a simple atmosphere. The use of a simple atmosphere removes complex intrinsic atmospheric variability while allowing the dominant mode of air-sea coupling to be represented as a statistical relationship between SST and wind stress anomalies. Using this hybrid coupled model, we perform a suite of coupled ensemble forecast experiments initiated with wind bursts in the western Pacific, where individual ensemble members differ only due to internal oceanic variability. We find that TIWs can induce a spread in the forecast amplitude of the Niño 3 SST anomaly 6-months after a given sequence of WWBs of approximately ± 45% the size of the ensemble mean anomaly. Further, when various estimates of stochastic atmospheric forcing are added, oceanic internal variability is found to contribute between about 20% and 70% of the ensemble forecast spread, with the remainder attributable to the atmospheric variability. While the oceanic contribution to ENSO stochastic forcing requires further quantification beyond the idealized approach used here, our results nevertheless suggest that TIWs may impact ENSO irregularity and predictability. This has implications for ENSO representation in low-resolution coupled models.

  6. METAL ABUNDANCES OF 12 DWARF IRREGULARS FROM THE ADBS SURVEY

    Energy Technology Data Exchange (ETDEWEB)

    Haurberg, Nathalie C.; Salzer, John J. [Department of Astronomy, Indiana University, 727 E. Third St., Bloomington, IN 47405 (United States); Rosenberg, Jessica, E-mail: nhaurber@astro.indiana.edu, E-mail: slaz@astro.indiana.edu, E-mail: jrosenb4@gmu.edu [School of Physics, Astronomy and Computational Science, George Mason University, MS 3F3, Fairfax, VA 22030 (United States)

    2013-03-01

    We have analyzed long-slit spectra of 12 dwarf irregular galaxies from the Arecibo Dual Beam Survey (ADBS). These galaxies represent a heterogeneous sample of objects detected by ADBS, but on average are relatively gas-rich, low-surface-brightness, and low-mass, thus represent a region of the galaxian population that is not commonly included in optical surveys. The metallicity-luminosity relationship for these galaxies is analyzed; the galaxies discussed in this paper appear to be under-abundant at a given luminosity when compared to a sample from the literature. We attempt to identify a 'second parameter' responsible for the intrinsic scatter and apparent under-abundance of our galaxies. We do not find a definitive second parameter but note the possible indication that infall or mixing of pristine gas may be responsible. We derive oxygen abundances for multiple H II regions in many of our galaxies but do not find any strong indications of metallicity variation within the galaxies except in one case where we see variation between an isolated H II region and the rest of the galaxy. Our data set includes the galaxy with the largest known H I-to-optical size ratio, ADBS 113845+2008. Our abundance analysis of this galaxy reveals that it is strongly over-enriched compared to galaxies of similar luminosity, indicating it is not a young object and confirming the result from Cannon et al. that this galaxy appears to be intrinsically rare in the local universe.

  7. Ionospheric irregularities at low latitudes in the American sector

    International Nuclear Information System (INIS)

    Nakamura, Y.

    1981-10-01

    A detailed analysis of the atomic oxigem airglow emission at the wavelength of 6300 A observed at Cachoeira Paulista (22 0 41'S, 45 0 00'W) shows that intensity perturbations frequently occur and propagate from north to south and from west to east. Such irregularities originated in the ionospheric F region and occur essencially during the premidnight period. These perturbations have a high frequency of occurrence during spring and summer and are rare during winter and fall. The disturbances are correlated with range type spread F detected over Cachoeira Paulista, and have characteristics similar to equatorial ionospheric plasma bubbles (i.e., similar seazonal variation, time of occurrence, ionogram signatures, direction and speed of propagation, etc.). A numerical simulation is carried out for the generation and evolution of ionospheric bubbles based on the theory of the collisional Rayleigh-Taylor instability for the equatorial and Cachoeira Paulista regions. Also a study was made of the, evolution of the bubble as a function of the electron density profile and as a function of the amplitude of the initial density perturbation. Assuming the electron density profile perturbed by the bubble, the [OI] 6300 A intensity was calculated for various latitudes arbitrarily taken within the photometer scanning range. The bubble was assumed to be aligned with the Earth's magnetic field and extending from higher altitudes at the equatorial region down to be arbitrary height of 150 Km at which a negligible conductivity is assumed. It was also assumed that the bubble was moving upwards with the velocity of 120 m/s, which in turn was estimated from initial numerical simulation results. The airglow calculation results show that as the bubble goes up, the disturbances in the airglow intensity propagate from north to south, in accord with observed experimental results. (Author) [pt

  8. Plasma Irregularity Production in the Polar Cap F-Region Ionosphere

    Science.gov (United States)

    Lamarche, Leslie

    Plasma in the Earth's ionosphere is highly irregular on scales ranging between a few centimeters and hundreds of kilometers. Small-scale irregularities or plasma waves can scatter radio waves resulting in a loss of signal for navigation and communication networks. The polar region is particularly susceptible to strong disturbances due to its direct connection with the Sun's magnetic field and energetic particles. In this thesis, factors that contribute to the production of decameter-scale plasma irregularities in the polar F region ionosphere are investigated. Both global and local control of irregularity production are studied, i.e. we consider global solar control through solar illumination and solar wind as well as much more local control by plasma density gradients and convection electric field. In the first experimental study, solar control of irregularity production is investigated using the Super Dual Auroral Radar Network (SuperDARN) radar at McMurdo, Antarctica. The occurrence trends for irregularities are analyzed statistically and a model is developed that describes the location of radar echoes within the radar's field-of-view. The trends are explained through variations in background plasma density with solar illumination affecting radar beam propagation. However, it is found that the irregularity occurrence during the night is higher than expected from ray tracing simulations based on a standard ionospheric density model. The high occurrence at night implies an additional source of plasma density and it is proposed that large-scale density enhancements called polar patches may be the source of this density. Additionally, occurrence maximizes around the terminator due to different competing irregularity production processes that favor a more or less sunlit ionosphere. The second study is concerned with modeling irregularity characteristics near a large-scale density gradient reversal, such as those expected near polar patches, with a particular focus on

  9. Reference: 241 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available 241 http://metadb.riken.jp/db/SciNetS_ria224i/cria224u4ria224u16024589i Calderon-V...development of Arabidopsis thaliana. 9 2473-85 16024589 2005 Sep The Plant cell Bevan Mike|Calderon-Villalobos Luz I A|Dohmann Esther M N|Kuhnle Carola|Li Hanbing|Schwechheimer Claus

  10. Reference: 468 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available five NPR1 paralogs in Arabidopsis. Here we report knockout analysis of two of these, NPR3 and NPR4. npr3 single mutants have elevat...t complemented by either wild-type NPR3 or NPR4, and is not associated with an elevat...with our previous finding that basal PR-1 levels are also elevated in the tga2 tga5 tga6 triple mutant, we p

  11. Comparative Analysis of the Arabidopsis Pollen Transcriptome

    Czech Academy of Sciences Publication Activity Database

    Honys, David; Twell, D.

    2003-01-01

    Roč. 132, - (2003), s. 640ů652 ISSN 0032-0889 R&D Projects: GA AV ČR IAA5038207 Grant - others:Royal Society(GB) NATO Postdoctoral Fellowship (to D.H.) Institutional research plan: CEZ:AV0Z5038910; CEZ:MSM 113100003 Keywords : transcriptome profiling * Arabidopsis pollen * male gametophyte Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 5.634, year: 2003

  12. Reference: 295 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available 295 http://metadb.riken.jp/db/SciNetS_ria224i/cria224u4ria224u16284313i Fujita Yas...ng that enhances drought stress tolerance in Arabidopsis. 12 3470-88 16284313 200...5 Dec The Plant cell Fujita Miki|Fujita Yasunari|Hiratsu Keiichiro|Maruyama Kyonoshin|Ohme-Takagi Masaru|Par

  13. Reference: 418 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available 418 http://metadb.riken.jp/db/SciNetS_ria224i/cria224u4ria224u16856986i Chai Mao-Feng...cid responses in Arabidopsis. 5 665-74 16856986 2006 Sep The Plant journal An Rui|Chai Mao-Feng|Chen Jia|Chen Qi-Jun|Wang Xue-Chen|Wei Peng-Cheng|Yang Shuhua

  14. Arabidopsis CDS blastp result: AK065950 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK065950 J013049M07 At3g11820.1 syntaxin 121 (SYP121) / syntaxin-related protein (S...YR1) contains Pfam profiles: PF00804 syntaxin and PF05739: SNARE domain; identical to cDNA syntaxin-related ...protein At-SYR1 (At-Syr1) GI:4206788, SP|Q9ZSD4 Syntaxin 121 (AtSYP121) (Syntaxin-related protein At-Syr1) {Arabidopsis thaliana} 5e-88 ...

  15. Reference: 495 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available . Emission of methanethiol from Arabidopsis plants supplied with 10 mM L-methionine was undetectable (cation in an alternat...>homocysteine-->cystathionine-->cysteine) in which methanethiol is an intermediate. Functional characterizat...wth on L-methionine as sole nitrogen source and conferred a high rate of methanethiol emission. The purified...mol min(-1) g(-1) FW), suggesting that AtMGL is not an important source of volatile methanethiol. Knocking o

  16. Arabidopsis CDS blastp result: AK110331 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK110331 002-164-D12 At2g31510.1 IBR domain-containing protein / ARIADNE-like prote...in ARI7 (ARI7) identical to ARIADNE-like protein ARI7 [Arabidopsis thaliana] GI:29125028; contains similarit...y to Swiss-Prot:Q94981 ariadne-1 protein (Ari-1) [Drosophila melanogaster]; contains Pfam profile PF01485: IBR domain 3e-59 ...

  17. Arabidopsis CDS blastp result: AK242789 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK242789 J090057B20 At2g31510.1 68415.m03850 IBR domain-containing protein / ARIADN...E-like protein ARI7 (ARI7) identical to ARIADNE-like protein ARI7 [Arabidopsis thaliana] GI:29125028; contai...ns similarity to Swiss-Prot:Q94981 ariadne-1 protein (Ari-1) [Drosophila melanogaster]; contains Pfam profile PF01485: IBR domain 8e-12 ...

  18. Arabidopsis CDS blastp result: AK121264 [KOME

    Lifescience Database Archive (English)

    Full Text Available AK121264 J023105D06 At3g15730.1 phospholipase D alpha 1 / PLD alpha 1 (PLDALPHA1) (PLD1) / choli...ne phosphatase 1 identical to SP:Q38882 Phospholipase D alpha 1 (EC 3.1.4.4) (AtPLDalpha1) (PLD alpha 1) (Choli...ne phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) (PLDalpha) [Arabidopsis thaliana] 0.0 ...

  19. Reference: 34 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available al gene in different tissues, under normal growth conditions, and when the plants were subjected to anoxia or other environmental...e1 gene of Arabidopsis is required during anoxia but not other environmental stre...ronmental stresses. We also characterize the expression of the aldehyde dehydrogena...ed under oxygen limitation among the PDC1 gene family and that a pdc1 null mutant is comprised in anoxia tolerance but not other envi

  20. Reference: 2 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available at share 60 to 80% protein sequence identity. Gene disruptions of the yeast (Saccharomyces cerevisiae) ortho... that these syntaxins are not essential for growth in yeast. However, we have isolated and characterized gene disruption...s in two genes from each family, finding that disruption of individual syntaxins from these fami...lies is lethal in the male gametophyte of Arabidopsis. Complementation of the syp21-1 gene disruption

  1. Reference: 584 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ing in Arabidopsis thaliana shoot and root stem cell organizers. 7137 811-4 17429400 2007 Apr Nature Hashimo...nda K et al. 2007 Apr. Nature 446(7137):811-4. Throughout the lifespan of a plant, which in some cases can l... 584 http://metadb.riken.jp/db/SciNetS_ria224i/cria224u4ria224u17429400i Sarkar Ana

  2. Reference: 435 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Arabidopsis. 7107 106-9 16936718 2006 Sep Nature Fobis-Loisy Isabelle|Gaude Thierry|Jaillais Yvon|Miège Christine|Rollin Claire ... 435 http://metadb.riken.jp/db/SciNetS_ria224i/cria224u4ria224u16936718i Jaillais Yvon et al. 2006 Sep. Natu...re 443(7107):106-9. Polarized cellular distribution of the phytohormone auxin and i

  3. Reference: 126 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available on of Hsp93 during protein import into chloroplasts, we isolated knockout mutant ...red to the wild type. Plastid protein composition, however, seems to be largely unaffected in atHsp93-V knock...out plants. Chloroplasts isolated from the atHsp93-V knockout mutant line are still able to import a variet...biogenesis of Arabidopsis chloroplasts. In contrast, knockout mutant plants for atHsp93-III, the second Arab

  4. Arabidopsis CDS blastp result: AK119645 [KOME

    Lifescience Database Archive (English)

    Full Text Available PF|00847 AP2 domain; identical to cDNA enhancer of shoot regeneration ESR1 GI:18028939, enhancer of shoot regeneration ESR1 [Arabidopsis thaliana] GI:18028940 1e-10 ... ...ve / enhancer of shoot regeneration (ESR1) similar to gb|D38124 EREBP-3 from Nicotiana tabacum and contains ...AK119645 002-130-G05 At1g12980.1 AP2 domain-containing transcription factor, putati

  5. Arabidopsis CDS blastp result: AK101133 [KOME

    Lifescience Database Archive (English)

    Full Text Available F|00847 AP2 domain; identical to cDNA enhancer of shoot regeneration ESR1 GI:18028939, enhancer of shoot regeneration ESR1 [Arabidopsis thaliana] GI:18028940 1e-10 ... ...eneration (ESR1) similar to gb|D38124 EREBP-3 from Nicotiana tabacum and contains P...AK101133 J033026F23 At1g12980.1 AP2 domain-containing transcription factor, putative / enhancer of shoot reg

  6. Reference: 497 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available hal albino phenotype. Rescue of tha2 mutants and tha1 tha2 double mutants by overproduction of feedback-inse...-specific expression of feedback-insensitive Thr deaminase in both tha1 and tha2 Thr aldolase mutants greatl...nsitive Thr deaminase (OMR1) shows that Gly formation by THA1 and THA2 is not essential in Arabidopsis. Seed

  7. Regulatory Proteolysis in Arabidopsis-Pathogen Interactions.

    Science.gov (United States)

    Pogány, Miklós; Dankó, Tamás; Kámán-Tóth, Evelin; Schwarczinger, Ildikó; Bozsó, Zoltán

    2015-09-24

    Approximately two and a half percent of protein coding genes in Arabidopsis encode enzymes with known or putative proteolytic activity. Proteases possess not only common housekeeping functions by recycling nonfunctional proteins. By irreversibly cleaving other proteins, they regulate crucial developmental processes and control responses to environmental changes. Regulatory proteolysis is also indispensable in interactions between plants and their microbial pathogens. Proteolytic cleavage is simultaneously used both by plant cells, to recognize and inactivate invading pathogens, and by microbes, to overcome the immune system of the plant and successfully colonize host cells. In this review, we present available results on the group of proteases in the model plant Arabidopsis thaliana whose functions in microbial pathogenesis were confirmed. Pathogen-derived proteolytic factors are also discussed when they are involved in the cleavage of host metabolites. Considering the wealth of review papers available in the field of the ubiquitin-26S proteasome system results on the ubiquitin cascade are not presented. Arabidopsis and its pathogens are conferred with abundant sets of proteases. This review compiles a list of those that are apparently involved in an interaction between the plant and its pathogens, also presenting their molecular partners when available.

  8. Spatial irregularities in Jupiter's upper ionosphere observed by voyager radio occultations

    Energy Technology Data Exchange (ETDEWEB)

    Hinson, D.P.; Tyler, G.L.

    1982-07-01

    Dual frequency radio occultation experiments carried out with Voyagers 1 and 2 provided data on the spatial irregularities in Jupiter's ionosphere at four different locations. Sample spectra of weak fluctuations in amplitude and phase of the 3.6-cm and 13-cm wavelength radio signals can be interpreted by using the theory for scattering from an anisotropic power law phase screen. Least squares solutions for ionospheric parameters derived from the observed fluctuation spectra yielded estimates of (1) the axial ratio, (2) angular orientation of the anisotropic irregularities, (3) the power law exponent of the spatial spectrum of irregularities, and (4) the magnitude of the spatial variations in electron density. Equipment limitations and the method of analysis constrain the observations to irregularities of approximate size 1--200 km. No evidence of the inner or outer scale of the irregularities was found. For length scales in the range given, the three-dimensional spatial spectrum obeys a power law with exponent varying from -3.0 to -3.7, and the root mean square fractional variations in electron density are 1--15%. All observed irregularities appear to be anisotropic with axial ratios between 2:1 and 10:1. Ionospheric parameters vary with altitude and latitude. We conclude that the measured angular orientation of the anisotropic irregularities indicates magnetic field direction and may provide a basis for refining Jovian magnetic field models.

  9. Proper Elements and Secular Resonances for Irregular Satellites

    Science.gov (United States)

    Beaugé, C.; Nesvorný, D.

    2007-06-01

    We present results of an analytical study of proper elements and secular resonances for the irregular satellites of the outer planets. In the case of the Jovian system we identify three satellite families, two of them previously known (Carme and Ananke), plus a new agglomeration of four bodies that includes Pasiphae as its largest member. While the distribution of proper elements for Saturn's moons seems to be more random, a small cluster was found for the direct moons formed by Albiorix, Erriapo, and 2004 S1, slightly different from the so-called Gaulish cluster. No significant families are detected in the present study for the Uranian or Neptunian satellite systems. For each satellite system we determine the location of several secular resonances in the proper element space. Apart from the well-known resonance locks of Pasiphae, Sinope, and Siarnaq, a comparison between the resonance locations and proper elements shows that Saturn's satellite Narvi also exhibits temporary librations in the ϖ-ϖsolar resonance. However, unlike the resonant Jovian moons that are located in the same configuration, Narvi's critical argument librates alternately around values near 90° and 270°. Neither the Uranian nor Neptunian systems seem to have resonant moons. The resonant dynamics of the real satellites in the vicinity of ϖ˙-ϖ˙solar=0 is studied with a simple model for secular resonances based on the restricted three-body problem. Depending on the initial conditions, we show the existence of one or two modes of libration that can occur at different values of the critical angle, showing a good correspondence with the observed behavior of all the resonant moons. Finally, we discuss the global distribution of the real satellites with respect to the secular resonances, as compared with synthetic populations of bodies drawn solely from stability conditions. For Saturn, we find that the present satellite population appears compatible with simple random distributions. Although

  10. The dynamics of rings around small, irregular bodies

    Science.gov (United States)

    Sicardy, Bruno

    2017-06-01

    Stellar occultations revealed the presence of two dense rings around the Centaur object (10199) Chariklo (Braga-Ribas et al., Nature 508, 72, 2014). This is the first ring system discovered around an object that is not a giant planet, suggesting that rings may exist around numerous bodies in the solar system. Chariklo's rings roughly reside at the outer limit of the Roche zone of the body. Moreover, the main ring has sharp edges, which call for the presence of putative shepherd satellites. Those characteristics give an image of Chariklo's rings that are rather similar, in terms of dynamics, to those surrounding the gaseous planets.An important difference exists, however, between giant planets and small bodies: the formers are highly axisymmetric, while the latters can support mass anomalies (eg surface topographic features) or non-spherical shapes (eg an ellipsoidal figure of equilibrium) that involve masses, relative to the body itself, as large as 10-4-10-3.We investigate the effect of non-axisymmetric terms in the potential of the body upon a collisional debris disk that initially surrounds a small irregular body. We show that the corotation points being maxima of energy, dissipative collisions remove the particles from the corotation zone over short time scales (< 106 years). Moreover, the Lindblad resonances inside the corotation radius create torques that drive the particles onto the surface of the central body. Conversely, the outer Lindblad resonances push the disk material beyond the outer 3/2 and 2/1 Lindblad resonances.Taking as an example Chariklo's ring system, for which recent data have been obtained from stellar occultations, we show that the Lindblad resonant torques actuate over short time scales (< 106 years). This general picture offers a natural explanation of the presence of dense rings at the outer limit of Chariklo's Roche zone, and their absence closer to the body.The work leading to this results has received funding from the European

  11. Dynamic stability of passive dynamic walking on an irregular surface.

    Science.gov (United States)

    Su, Jimmy Li-Shin; Dingwell, Jonathan B

    2007-12-01

    Falls that occur during walking are a significant health problem. One of the greatest impediments to solve this problem is that there is no single obviously "correct" way to quantify walking stability. While many people use variability as a proxy for stability, measures of variability do not quantify how the locomotor system responds to perturbations. The purpose of this study was to determine how changes in walking surface variability affect changes in both locomotor variability and stability. We modified an irreducibly simple model of walking to apply random perturbations that simulated walking over an irregular surface. Because the model's global basin of attraction remained fixed, increasing the amplitude of the applied perturbations directly increased the risk of falling in the model. We generated ten simulations of 300 consecutive strides of walking at each of six perturbation amplitudes ranging from zero (i.e., a smooth continuous surface) up to the maximum level the model could tolerate without falling over. Orbital stability defines how a system responds to small (i.e., "local") perturbations from one cycle to the next and was quantified by calculating the maximum Floquet multipliers for the model. Local stability defines how a system responds to similar perturbations in real time and was quantified by calculating short-term and long-term local exponential rates of divergence for the model. As perturbation amplitudes increased, no changes were seen in orbital stability (r(2)=2.43%; p=0.280) or long-term local instability (r(2)=1.0%; p=0.441). These measures essentially reflected the fact that the model never actually "fell" during any of our simulations. Conversely, the variability of the walker's kinematics increased exponentially (r(2)>or=99.6%; psimulated conditions, the walker remained orbitally stable, while exhibiting substantial local instability. This was because very small initial perturbations diverged away from the limit cycle, while larger

  12. X-ray pulsars in nearby irregular galaxies

    Science.gov (United States)

    Yang, Jun

    2018-01-01

    The Small Magellanic Cloud (SMC), Large Magellanic Cloud (LMC) and Irregular Galaxy IC 10 are valuable laboratories to study the physical, temporal and statistical properties of the X-ray pulsar population with multi-satellite observations, in order to probe fundamental physics. The known distance of these galaxies can help us easily categorize the luminosity of the pulsars and their age difference can be helpful for for studying the origin and evolution of compact objects. Therefore, a complete archive of 116 XMM-Newton PN, 151 Chandra (Advanced CCD Imaging Spectrometer) ACIS, and 952 RXTE PCA observations for the pulsars in the Small Magellanic Cloud (SMC) were collected and analyzed, along with 42 XMM-Newton and 30 Chandra observations for the Large Magellanic Cloud, spanning 1997-2014. From a sample of 67 SMC pulsars we generate a suite of products for each pulsar detection: spin period, flux, event list, high time-resolution light-curve, pulse-profile, periodogram, and X-ray spectrum. Combining all three satellites, I generated complete histories of the spin periods, pulse amplitudes, pulsed fractions and X-ray luminosities. Many of the pulsars show variations in pulse period due to the combination of orbital motion and accretion torques. Long-term spin-up/down trends are seen in 28/25 pulsars respectively, pointing to sustained transfer of mass and angular momentum to the neutron star on decadal timescales. The distributions of pulse detection and flux as functions of spin period provide interesting findings: mapping boundaries of accretion-driven X-ray luminosity, and showing that fast pulsars (P<10 s) are rarely detected, which yet are more prone to giant outbursts. In parallel we compare the observed pulse profiles to our general relativity (GR) model of X-ray emission in order to constrain the physical parameters of the pulsars.In addition, we conduct a search for optical counterparts to X-ray sources in the local dwarf galaxy IC 10 to form a comparison

  13. Shape of the nuclear magnetic resonance line in anisotropic superconductors with an irregular vortex lattice

    International Nuclear Information System (INIS)

    Minkin, A.V.; Tsarevskij, S.L.

    2006-01-01

    For high-temperature superconductors the shape of a NMR spectrum line is built regarding for variation of inhomogeneity of irregular vortex lattice magnetic field near superconductor surface. It is shown that the shape of a NMR line is not simply widened but noticeably varies depending on the degree of irregularity of a superconductor vortex lattice. This variation is associated with a local symmetry decrease in an irregular vortex lattice of the superconductor. Taking into account these circumstances may considerably change conclusions about the type of a vortex lattice and superconductor parameters which are commonly gained from NMR line shape analysis [ru

  14. Randomness control of vehicular motion through a sequence of traffic signals at irregular intervals

    International Nuclear Information System (INIS)

    Nagatani, Takashi

    2010-01-01

    We study the regularization of irregular motion of a vehicle moving through the sequence of traffic signals with a disordered configuration. Each traffic signal is controlled by both cycle time and phase shift. The cycle time is the same for all signals, while the phase shift varies from signal to signal by synchronizing with intervals between a signal and the next signal. The nonlinear dynamic model of the vehicular motion is presented by the stochastic nonlinear map. The vehicle exhibits the very complex behavior with varying both cycle time and strength of irregular intervals. The irregular motion induced by the disordered configuration is regularized by adjusting the phase shift within the regularization regions.

  15. Scintillations associated with bottomside sinusoidal irregularities in the equatorial F region

    Science.gov (United States)

    Basu, S.; Basu, S.; Valladares, C. E.; Dasgupta, A.; Whitney, H. E.

    1986-01-01

    Multisatellite scintillation observations and spaced receiver drift measurements are presented for a category of equatorial F region plasma irregularities characterized by nearly sinusoidal waveforms in the ion number density. The observations were made at Huancayo, Peru, and the measurements at Ancon, Peru, associated with irregularities observed by the Atmospheric-Explorer-E satellite on a few nights in December 1979. Utilizing ray paths to various geostationary satellites, it was found that the irregularities grow and decay almost simultaneously in long-lived patches extending at least 1000 km in the east-west direction.

  16. Target Tracking of a Linear Time Invariant System under Irregular Sampling

    Directory of Open Access Journals (Sweden)

    Jin Xue-Bo

    2012-11-01

    Full Text Available Due to event-triggered sampling in a system, or maybe with the aim of reducing data storage, tracking many applications will encounter irregular sampling time. By calculating the matrix exponential using an inverse Laplace transform, this paper transforms the irregular sampling tracking problem to the problem of tracking with time-varying parameters of a system. Using the common Kalman filter, the developed method is used to track a target for the simulated trajectory and video tracking. The results of simulation experiments have shown that it can obtain good estimation performance even at a very high irregular rate of measurement sampling time.

  17. Comparative analysis of drought resistance genes in Arabidopsis and rice

    NARCIS (Netherlands)

    Trijatmiko, K.R.

    2005-01-01

    Keywords: rice, Arabidopsis, drought, genetic mapping,microarray, transcription factor, AP2/ERF, SHINE, wax, stomata, comparative genetics, activation tagging, Ac/Ds, En/IThis thesis describes the use of genomics information and tools from Arabidopsis and

  18. Herbivore-induced resistance against microbial pathogens in Arabidopsis

    NARCIS (Netherlands)

    Vos, de M.; Zaanen, van W.; Koornneef, A.; Korzelius, J.P.; Dicke, M.; Loon, van L.C.; Pieterse, C.M.J.

    2006-01-01

    Caterpillars of the herbivore Pieris rapae stimulate the production of jasmonic acid (JA) and ethylene (ET) in Arabidopsis (Arabidopsis thaliana) and trigger a defense response that affects insect performance on systemic tissues. To investigate the spectrum of effectiveness of P. rapae-induced

  19. Herbivore-induced resistance against microbial pathogens in Arabidopsis

    NARCIS (Netherlands)

    Vos, M. de; Zaanen, W. van; Koornneef, A.; Korzelius, J.P.; Dicke, M.; Loon, L.C. van; Pieterse, C.M.J.

    2006-01-01

    Caterpillars of the herbivore Pieris rapae stimulate the production of jasmonic acid (JA) and ethylene (ET) in Arabidopsis (Arabidopsis thaliana) and trigger a defense response that affects insect performance on systemic tissues. To investigate the sspectrum of effectiveness of P. rapae-induced

  20. Soil mixture composition alters Arabidopsis susceptibility to Pseudomonas syringae infection

    Science.gov (United States)

    Pseudomonas syringae is a Gram-negative bacterial pathogen that causes disease on more than 100 different plant species, including the model plant Arabidopsis thaliana. Dissection of the Arabidopsis thaliana-Pseudomonas syringae pathosystem has identified many factors that contribute to successful ...

  1. Co-localisation studies of Arabidopsis SR splicing factors reveal different types of speckles in plant cell nuclei

    International Nuclear Information System (INIS)

    Lorkovic, Zdravko J.; Hilscher, Julia; Barta, Andrea

    2008-01-01

    SR proteins are multidomain splicing factors which are important for spliceosome assembly and for regulation of alternative splicing. In mammalian nuclei these proteins localise to speckles from where they are recruited to transcription sites. By using fluorescent protein fusion technology and different experimental approaches it has been shown that Arabidopsis SR proteins, in addition to diffuse nucleoplasmic staining, localise into an irregular nucleoplasmic network resembling speckles in mammalian cells. As Arabidopsis SR proteins fall into seven conserved sub-families we investigated co-localisation of members of the different sub-families in transiently transformed tobacco protoplast. Here we demonstrate the new finding that members of different SR protein sub-families localise into distinct populations of nuclear speckles with no, partial or complete co-localisation. This is particularly interesting as we also show that these proteins do interact in a yeast two-hybrid assay as well as in pull-down and in co-immunopreciptiation assays. Our data raise the interesting possibility that SR proteins are partitioned into distinct populations of nuclear speckles to allow a more specific recruitment to the transcription/pre-mRNA processing sites of particular genes depending on cell type and developmental stage

  2. Genetic analysis of seed development in Arabidopsis thaliana = [Genetische analyse van de zaadontwikkeling in Arabidopsis thaliana

    NARCIS (Netherlands)

    Leon - Kloosterziel, K.

    1997-01-01


    This thesis deals with the genetic aspects of seed development in Arabidopsisthaliana. Mutants affected in several aspects of seed development and, more specifically, in seed maturation have been isolated by various selection

  3. Spelling pronunciation and visual preview both facilitate learning to spell irregular word

    NARCIS (Netherlands)

    Hilte, M.; Reitsma, P.

    2006-01-01

    Spelling pronunciations are hypothesized to be helpful in building up relatively stable phonologically underpinned orthographic representations, particularly for learning words with irregular phoneme-grapheme correspondences. In a four-week computer-based training, the efficacy of spelling

  4. On Impulsive Boundary Value Problems of Fractional Differential Equations with Irregular Boundary Conditions

    Directory of Open Access Journals (Sweden)

    Guotao Wang

    2012-01-01

    Full Text Available We study nonlinear impulsive differential equations of fractional order with irregular boundary conditions. Some existence and uniqueness results are obtained by applying standard fixed-point theorems. For illustration of the results, some examples are discussed.

  5. Inter-hospital Cross-validation of Irregular Discharge Patterns for Young vs. Old Psychiatric Patients

    Science.gov (United States)

    Mozdzierz, Gerald J.; Davis, William E.

    1975-01-01

    Type of discharge (irregular vs. regular) and length of time hospitalized were used as unobtrusive measures of psychiatric patient acceptance of hospital treatment regime among two groups (18-27 years and 45 years and above) of patients. (Author)

  6. Irregular singularities in Liouville theory and Argyres-Douglas type gauge theories, I

    Energy Technology Data Exchange (ETDEWEB)

    Gaiotto, D. [Institute for Advanced Study (IAS), Princeton, NJ (United States); Teschner, J. [Deutsches Elektronen-Synchrotron (DESY), Hamburg (Germany)

    2012-03-15

    Motivated by problems arising in the study of N=2 supersymmetric gauge theories we introduce and study irregular singularities in two-dimensional conformal field theory, here Liouville theory. Irregular singularities are associated to representations of the Virasoro algebra in which a subset of the annihilation part of the algebra act diagonally. In this paper we define natural bases for the space of conformal blocks in the presence of irregular singularities, describe how to calculate their series expansions, and how such conformal blocks can be constructed by some delicate limiting procedure from ordinary conformal blocks. This leads us to a proposal for the structure functions appearing in the decomposition of physical correlation functions with irregular singularities into conformal blocks. Taken together, we get a precise prediction for the partition functions of some Argyres-Douglas type theories on S{sup 4}. (orig.)

  7. Conflict management among irregular immigrants: the micro politics of intercultural respect.

    OpenAIRE

    Clough, Paul; Works in Progress Seminars Series

    2010-01-01

    A talk in the Works in Progress Seminars Series with the title of "Conflict management among irregular immigrants: the micro politics of intercultural respect". This talk is given by Prof Paul Clough.

  8. Irregular singularities in Liouville theory and Argyres-Douglas type gauge theories, I

    International Nuclear Information System (INIS)

    Gaiotto, D.; Teschner, J.

    2012-03-01

    Motivated by problems arising in the study of N=2 supersymmetric gauge theories we introduce and study irregular singularities in two-dimensional conformal field theory, here Liouville theory. Irregular singularities are associated to representations of the Virasoro algebra in which a subset of the annihilation part of the algebra act diagonally. In this paper we define natural bases for the space of conformal blocks in the presence of irregular singularities, describe how to calculate their series expansions, and how such conformal blocks can be constructed by some delicate limiting procedure from ordinary conformal blocks. This leads us to a proposal for the structure functions appearing in the decomposition of physical correlation functions with irregular singularities into conformal blocks. Taken together, we get a precise prediction for the partition functions of some Argyres-Douglas type theories on S 4 . (orig.)

  9. Effect of surface stress and irregularity of the interface on the ...

    Indian Academy of Sciences (India)

    Surface stress; irregularity of the interface; magneto-elastic crustal ... stress plays a vital role in the propagation of waves due to the fact that the surface of a ...... Mumbai, for his computational help towards the numerical calculations and graphs.

  10. Database Description - Arabidopsis Phenome Database | LSDB Archive [Life Science Database Archive metadata

    Lifescience Database Archive (English)

    Full Text Available List Contact us Arabidopsis Phenome Database Database Description General information of database Database n... BioResource Center Hiroshi Masuya Database classification Plant databases - Arabidopsis thaliana Organism T...axonomy Name: Arabidopsis thaliana Taxonomy ID: 3702 Database description The Arabidopsis thaliana phenome i...heir effective application. We developed the new Arabidopsis Phenome Database integrating two novel database...seful materials for their experimental research. The other, the “Database of Curated Plant Phenome” focusing

  11. Dynamics of landslides on comets of irregular shape

    Science.gov (United States)

    Czechowski, Leszek

    2017-04-01

    Landslides were observed on a few comet's nuclei, e.g. [1], [2]. The mechanism of their origin is not obvious because of very low gravity. According to [2] fluidization and multiphase transport of cometary material could be an explanation. We investigate here motion of the mass on a comet of irregular shape. The mechanism responsible for the low friction is not considered here. In fact, mass motion often occurs without contact with the surface. The motion could be triggered by meteoroids impacts or by the tidal forces. Comets nuclei are believed to be built of soft materials like snow and dust. The landing of Philae on the comet 67P/Czuriumow-Gierasimienko indicates a different situation. According to [1]: "thermal probe did not fully penetrate the near-surface layers, suggesting a local resistance of the ground to penetration of >4 megapascals, equivalent to >2 megapascal uniaxial compressive strength". Here we assume that elastic properties of comet's nuclei could be similar to elastic properties of dry snow, namely Young modulus is assumed to be 1 - 100 MPa, see [3] and [4]. We consider nucleus of the shape of 67P/Churyumov-Gerasimenko with density 470 kg/m3. The impact or tidal forces result in changing of rotation of the comet. In general, the vector of angular velocity will be a subject to nutation that results in changing of centrifugal force, and consequently could be a factor triggering landslides. Note that nucleus' shape does not resemble the shape of surface of constant value of gravitational potential (i.e. 'geoid'). Our numerical models indicate the parts of the nucleus where landslides start and other parts where landslides stop. Of course, the regolith from the first type of regions would be removed to the regions of the second class. The motion of the mass is often complicated because of complicated distribution of the gravity and complicated shape of the nucleus. Acknowledgement: The research is partly supported by Polish National Science Centre

  12. Efficient irregular wavefront propagation algorithms on Intel® Xeon Phi™

    OpenAIRE

    Gomes, Jeremias M.; Teodoro, George; de Melo, Alba; Kong, Jun; Kurc, Tahsin; Saltz, Joel H.

    2015-01-01

    We investigate the execution of the Irregular Wavefront Propagation Pattern (IWPP), a fundamental computing structure used in several image analysis operations, on the Intel® Xeon Phi™ co-processor. An efficient implementation of IWPP on the Xeon Phi is a challenging problem because of IWPP’s irregularity and the use of atomic instructions in the original IWPP algorithm to resolve race conditions. On the Xeon Phi, the use of SIMD and vectorization instructions is critical to attain high perfo...

  13. SUB-SAHARAN IRREGULAR MIGRANTS IN MOROCCO & THE EXCEPTIONAL REGULARISATION PROGRAMME IN 2014

    OpenAIRE

    Naama, Mbarek

    2017-01-01

    Naama, Mbarek. Sub-Saharan Irregular Migrants in Morocco and the Exceptional Regularisation Programme in 2014. Diak South Helsinki Finland. Spring 2017. 43 Pages. Language: English. Diaconia University of Applied Sciences, Degree Programme in Social Services, Option in Community Development, Bachelor of Social Services (UAS). After decades of ignoring irregular migration and refusing to acknowledge that Morocco is no longer just a transit but also a host country for increasing complex mig...

  14. Modalities of Tonometry and their Accuracy with Respect to Corneal Thickness and Irregularities

    OpenAIRE

    Carlos Gustavo V. De Moraes; Tiago S. Prata; Jeffrey Liebmann; Robert Ritch

    2008-01-01

    Recent advances in tonometry have led to the development of a number of devices with differing clinical applications. Their role in cases of abnormal corneal thickness and surface irregularities is particularly important, as inaccurate estimation of the true intraocular pressure (IOP) in such cases may lead to suboptimal evaluation. The purpose of the present review was to evaluate the accuracy of the most widely used devices in cases of corneal thickness and surface irregularities, based ...

  15. Formation of dwarf ellipticals and dwarf irregular galaxies by interaction of giant galaxies under environmental influence

    OpenAIRE

    Chattopadhyay, Tanuka; Debsarma, Suma; Karmakar, Pradip; Davoust, Emmanuel

    2014-01-01

    A model is proposed for the formation of gas-rich dwarf irregular galaxies and gas-poor, rotating dwarf elliptical galaxies following the interaction between two giant galaxies as a function of space density. The formation of dwarf galaxies is considered to depend on a random variable, the tidal index theta, an environmental parameter defined by Karachentsev et al. (2004), such that for theta less than zero, the formation of dwarf irregular galaxy is assured whereas for theta greater than zer...

  16. A Generalized FDM for solving the Poisson's Equation on 3D Irregular Domains

    Directory of Open Access Journals (Sweden)

    J. Izadian

    2014-01-01

    Full Text Available In this paper a new method for solving the Poisson's equation with Dirichlet conditions on irregular domains is presented. For this purpose a generalized finite differences method is applied for numerical differentiation on irregular meshes. Three examples on cylindrical and spherical domains are considered. The numerical results are compared with analytical solution. These results show the performance and efficiency of the proposed method.

  17. Characterizing neural activities evoked by manual acupuncture through spiking irregularity measures

    International Nuclear Information System (INIS)

    Xue Ming; Wang Jiang; Deng Bin; Wei Xi-Le; Yu Hai-Tao; Chen Ying-Yuan

    2013-01-01

    The neural system characterizes information in external stimulations by different spiking patterns. In order to examine how neural spiking patterns are related to acupuncture manipulations, experiments are designed in such a way that different types of manual acupuncture (MA) manipulations are taken at the ‘Zusanli’ point of experimental rats, and the induced electrical signals in the spinal dorsal root ganglion are detected and recorded. The interspike interval (ISI) statistical histogram is fitted by the gamma distribution, which has two parameters: one is the time-dependent firing rate and the other is a shape parameter characterizing the spiking irregularities. The shape parameter is the measure of spiking irregularities and can be used to identify the type of MA manipulations. The coefficient of variation is mostly used to measure the spike time irregularity, but it overestimates the irregularity in the case of pronounced firing rate changes. However, experiments show that each acupuncture manipulation will lead to changes in the firing rate. So we combine four relatively rate-independent measures to study the irregularity of spike trains evoked by different types of MA manipulations. Results suggest that the MA manipulations possess unique spiking statistics and characteristics and can be distinguished according to the spiking irregularity measures. These studies have offered new insights into the coding processes and information transfer of acupuncture. (interdisciplinary physics and related areas of science and technology)

  18. Effects of surface irregularities on intensity data from laser scanning: an experimental approach.

    Directory of Open Access Journals (Sweden)

    G. Teza

    2008-06-01

    Full Text Available The results of an experiment carried out with the aim to investigate the role of surface irregularities on the intensity data provided by a terrestrial laser scanner (TLS survey are reported here. Depending on surface roughness, the interaction between an electromagnetic wave and microscopic irregularities leads to a Lambertian-like diffusive light reflection, allowing the TLS to receive the backscattered component of the signal. The described experiment consists in a series of TLS-based acquisitions of a rotating artificial target specifically conceived in order to highlight the effects on the intensity data due to surface irregularity. This target is articulated in a flat plate and in an irregular surface, whose macro-roughness has a characteristic length with the same order of the spot size. Results point out the different behavior of the plates. The intensity of the signal backscattered by the planar element decreases if the incidence angle increases, whereas the intensity of the signal backscattered by the irregular surface is almost constant if the incidence angle varies. Since the typical surfaces acquired in a geological/geophysical survey are generally irregular, these results imply that the intensity data can be easily used in order to evaluate the reflectance of the material at the considered wavelength, e.g. for pattern recognition purposes.

  19. Radar Observations of 8.3-m scale equatorial spread F irregularities over Trivandrum

    Directory of Open Access Journals (Sweden)

    D. Tiwari

    2004-03-01

    Full Text Available In this paper, we present observations of equatorial spread F (ESF irregularities made using a newly installed 18MHz radar located at Trivandrum. We characterize the morphology and the spectral parameters of the 8.3-m ESF irregularities which are found to be remarkably different from that observed so extensively at the 3-m scale size. We also present statistical results of the irregularities in the form of percentage occurrence of the echoes and spectral parameters (SNR, Doppler velocity, Spectral width. The Doppler spectra are narrower, less structured and less variable in time as compared to those observed for 3-m scale size. We have never observed the ESF irregularity velocities to be supersonic here unlike those at Jicamarca, and the velocities are found to be within ±200ms–1. The spectral widths are found to be less than 150ms–1. Hence, the velocities and spectral width both are smaller than those reported for 3-m scale size. The velocities and spectral widths are further found to be much smaller than those of the American sector. These observations are compared with those reported elsewhere and discussed in the light of present understanding on the ESF irregularities at different wavelengths.

    Key words. Ionoshphere (equatorial ionosphere, plasma waves and instabilities; ionospheric irregularities

  20. Radar Observations of 8.3-m scale equatorial spread F irregularities over Trivandrum

    Directory of Open Access Journals (Sweden)

    D. Tiwari

    2004-03-01

    Full Text Available In this paper, we present observations of equatorial spread F (ESF irregularities made using a newly installed 18MHz radar located at Trivandrum. We characterize the morphology and the spectral parameters of the 8.3-m ESF irregularities which are found to be remarkably different from that observed so extensively at the 3-m scale size. We also present statistical results of the irregularities in the form of percentage occurrence of the echoes and spectral parameters (SNR, Doppler velocity, Spectral width. The Doppler spectra are narrower, less structured and less variable in time as compared to those observed for 3-m scale size. We have never observed the ESF irregularity velocities to be supersonic here unlike those at Jicamarca, and the velocities are found to be within ±200ms–1. The spectral widths are found to be less than 150ms–1. Hence, the velocities and spectral width both are smaller than those reported for 3-m scale size. The velocities and spectral widths are further found to be much smaller than those of the American sector. These observations are compared with those reported elsewhere and discussed in the light of present understanding on the ESF irregularities at different wavelengths. Key words. Ionoshphere (equatorial ionosphere, plasma waves and instabilities; ionospheric irregularities

  1. Study of electromagnetic wave scattering by periodic density irregularities in plasma

    International Nuclear Information System (INIS)

    Lyle, R.; Kuo, S.P.; Huang, J.

    1995-01-01

    A quasi-particle approach is used to formulate wave propagation and scattering in a periodically structured plasma. The theory is then applied to study the effect of bottomside sinusoidal (BSS) irregularities on the propagation of beacon satellites signals through the ionosphere. In this approach, the radio wave is treated as a distribution of quasi-particles described by a Wigner distribution function governed by a transport equation. The irregularities providing the collisional effect are modeled as a two dimensional density modulation on a uniform background plasma. The present work generalizes the previous work by including the spectral bandwidth (Δk/k) effect of the spatially periodic irregularities on the transionospheric signal propagation. The collision of quasi-particles with the irregularities modifies the quasi-particle distribution and give rise to the wave scattering phenomenon. The multiple scattering process is generally considered in this deterministic analysis of radio wave scattering off the ionospheric density irregularities. The analysis shows that this two dimensional density grating effectively modulates the intensity of the beacon satellite signals. This spatial modulation of the wave intensity is converted into time modulation due to the drift of the ionospheric irregularities, which then results in the scintillation of the beacon satellite signals

  2. New prospective 4D-CT for mitigating the effects of irregular respiratory motion

    Science.gov (United States)

    Pan, Tinsu; Martin, Rachael M.; Luo, Dershan

    2017-08-01

    Artifact caused by irregular respiration is a major source of error in 4D-CT imaging. We propose a new prospective 4D-CT to mitigate this source of error without new hardware, software or off-line data-processing on the GE CT scanner. We utilize the cine CT scan in the design of the new prospective 4D-CT. The cine CT scan at each position can be stopped by the operator when an irregular respiration occurs, and resumed when the respiration becomes regular. This process can be repeated at one or multiple scan positions. After the scan, a retrospective reconstruction is initiated on the CT console to reconstruct only the images corresponding to the regular respiratory cycles. The end result is a 4D-CT free of irregular respiration. To prove feasibility, we conducted a phantom and six patient studies. The artifacts associated with the irregular respiratory cycles could be removed from both the phantom and patient studies. A new prospective 4D-CT scanning and processing technique to mitigate the impact of irregular respiration in 4D-CT has been demonstrated. This technique can save radiation dose because the repeat scans are only at the scan positions where an irregular respiration occurs. Current practice is to repeat the scans at all positions. There is no cost to apply this technique because it is applicable on the GE CT scanner without new hardware, software or off-line data-processing.

  3. Influence of long-wavelength track irregularities on the motion of a high-speed train

    Science.gov (United States)

    Hung, C. F.; Hsu, W. L.

    2018-01-01

    Vertical track irregularities over viaducts in high-speed rail systems could be possibly caused by concrete creep if pre-stressed concrete bridges are used. For bridge spans that are almost uniformly distributed, track irregularity exhibits a near-regular wave profile that excites car bodies as a high-speed train moves over the bridge system. A long-wavelength irregularity induces low-frequency excitation that may be close to the natural frequencies of the train suspension system, thereby causing significant vibration of the car body. This paper investigates the relationship between the levels of car vibration, bridge vibration, track irregularity, and the train speed. First, this study investigates the vibration levels of a high-speed train and bridge system using 3D finite-element (FE) transient dynamic analysis, before and after adjustment of vertical track irregularities by means of installing shimming plates under rail pads. The analysis models are validated by in situ measurements and on-board measurement. Parametric studies of car body vibration and bridge vibration under three different levels of track irregularity at five train speeds and over two bridge span lengths are conducted using the FE model. Finally, a discontinuous shimming pattern is proposed to avoid vehicle suspension resonance.

  4. Properties of the Irregular Satellite System around Uranus Inferred from K2 , Herschel , and Spitzer Observations

    Energy Technology Data Exchange (ETDEWEB)

    Farkas-Takács, A.; Kiss, Cs.; Pál, A.; Molnár, L.; Szabó, Gy. M.; Hanyecz, O.; Sárneczky, K.; Szabó, R.; Marton, G.; Szakáts, R.; Kiss, L. L. [Konkoly Observatory, Research Centre for Astronomy and Earth Sciences, Hungarian Academy of Sciences, Konkoly Thege Miklós út 15-17, H-1121 Budapest (Hungary); Mommert, M. [Department of Physics and Astronomy, Northern Arizona University, P.O. Box 6010, Flagstaff, AZ 86011 (United States); Müller, T., E-mail: farkas.aniko@csfk.mta.hu [Max-Plank-Institut für extraterrestrsiche Pyhsik, Garching (Germany)

    2017-09-01

    In this paper, we present visible-range light curves of the irregular Uranian satellites Sycorax, Caliban, Prospero, Ferdinand, and Setebos taken with the Kepler Space Telescope over the course of the K2 mission. Thermal emission measurements obtained with the Herschel /PACS and Spitzer /MIPS instruments of Sycorax and Caliban were also analyzed and used to determine size, albedo, and surface characteristics of these bodies. We compare these properties with the rotational and surface characteristics of irregular satellites in other giant planet systems and also with those of main belt and Trojan asteroids and trans-Neptunian objects. Our results indicate that the Uranian irregular satellite system likely went through a more intense collisional evolution than the irregular satellites of Jupiter and Saturn. Surface characteristics of Uranian irregular satellites seem to resemble the Centaurs and trans-Neptunian objects more than irregular satellites around other giant planets, suggesting the existence of a compositional discontinuity in the young solar system inside the orbit of Uranus.

  5. Properties of the Irregular Satellite System around Uranus Inferred from K2, Herschel, and Spitzer Observations

    Science.gov (United States)

    Farkas-Takács, A.; Kiss, Cs.; Pál, A.; Molnár, L.; Szabó, Gy. M.; Hanyecz, O.; Sárneczky, K.; Szabó, R.; Marton, G.; Mommert, M.; Szakáts, R.; Müller, T.; Kiss, L. L.

    2017-09-01

    In this paper, we present visible-range light curves of the irregular Uranian satellites Sycorax, Caliban, Prospero, Ferdinand, and Setebos taken with the Kepler Space Telescope over the course of the K2 mission. Thermal emission measurements obtained with the Herschel/PACS and Spitzer/MIPS instruments of Sycorax and Caliban were also analyzed and used to determine size, albedo, and surface characteristics of these bodies. We compare these properties with the rotational and surface characteristics of irregular satellites in other giant planet systems and also with those of main belt and Trojan asteroids and trans-Neptunian objects. Our results indicate that the Uranian irregular satellite system likely went through a more intense collisional evolution than the irregular satellites of Jupiter and Saturn. Surface characteristics of Uranian irregular satellites seem to resemble the Centaurs and trans-Neptunian objects more than irregular satellites around other giant planets, suggesting the existence of a compositional discontinuity in the young solar system inside the orbit of Uranus.

  6. Modification of transmission dose algorithm for irregularly shaped radiation field and tissue deficit

    Energy Technology Data Exchange (ETDEWEB)

    Yun, Hyong Geon; Shin, Kyo Chul [Dankook Univ., College of Medicine, Seoul (Korea, Republic of); Huh, Soon Nyung; Woo, Hong Gyun; Ha, Sung Whan [Seoul National Univ., College of Medicine, Seoul (Korea, Republic of); Lee, Hyoung Koo [The Catholic Univ., College of Medicine, Seoul (Korea, Republic of)

    2002-07-01

    Algorithm for estimation of transmission dose was modified for use in partially blocked radiation fields and in cases with tissue deficit. The beam data was measured with flat solid phantom in various conditions of beam block. And an algorithm for correction of transmission dose in cases of partially blocked radiation field was developed from the measured data. The algorithm was tested in some clinical settings with irregular shaped field. Also, another algorithm for correction of transmission dose for tissue deficit was developed by physical reasoning. This algorithm was tested in experimental settings with irregular contours mimicking breast cancer patients by using multiple sheets of solid phantoms. The algorithm for correction of beam block could accurately reflect the effect of beam block, with error within {+-}1.0%, both with square fields and irregularly shaped fields. The correction algorithm for tissue deficit could accurately reflect the effect of tissue deficit with errors within {+-}1.0% in most situations and within {+-}3.0% in experimental settings with irregular contours mimicking breast cancer treatment set-up. Developed algorithms could accurately estimate the transmission dose in most radiation treatment settings including irregularly shaped field and irregularly shaped body contour with tissue deficit in transmission dosimetry.

  7. Modification of transmission dose algorithm for irregularly shaped radiation field and tissue deficit

    International Nuclear Information System (INIS)

    Yun, Hyong Geon; Shin, Kyo Chul; Huh, Soon Nyung; Woo, Hong Gyun; Ha, Sung Whan; Lee, Hyoung Koo

    2002-01-01

    Algorithm for estimation of transmission dose was modified for use in partially blocked radiation fields and in cases with tissue deficit. The beam data was measured with flat solid phantom in various conditions of beam block. And an algorithm for correction of transmission dose in cases of partially blocked radiation field was developed from the measured data. The algorithm was tested in some clinical settings with irregular shaped field. Also, another algorithm for correction of transmission dose for tissue deficit was developed by physical reasoning. This algorithm was tested in experimental settings with irregular contours mimicking breast cancer patients by using multiple sheets of solid phantoms. The algorithm for correction of beam block could accurately reflect the effect of beam block, with error within ±1.0%, both with square fields and irregularly shaped fields. The correction algorithm for tissue deficit could accurately reflect the effect of tissue deficit with errors within ±1.0% in most situations and within ±3.0% in experimental settings with irregular contours mimicking breast cancer treatment set-up. Developed algorithms could accurately estimate the transmission dose in most radiation treatment settings including irregularly shaped field and irregularly shaped body contour with tissue deficit in transmission dosimetry

  8. Irregular menses predicts ovarian cancer: Prospective evidence from the Child Health and Development Studies.

    Science.gov (United States)

    Cirillo, Piera M; Wang, Erica T; Cedars, Marcelle I; Chen, Lee-May; Cohn, Barbara A

    2016-09-01

    We tested the hypothesis that irregular menstruation predicts lower risk for ovarian cancer, possibly due to less frequent ovulation. We conducted a 50-year prospective study of 15,528 mothers in the Child Health and Development Studies cohort recruited from the Kaiser Foundation Health Plan from 1959 to 1966. Irregular menstruation was classified via medical record and self-report at age 26. We identified 116 cases and 84 deaths due to ovarian cancer through 2011 via linkage to the California Cancer Registry and Vital Statistics. Contrary to expectation, women with irregular menstrual cycles had a higher risk of ovarian cancer incidence and mortality over the 50-year follow-up. Associations increased with age (p irregular menstruation and ovarian cancer-we unexpectedly found higher risk for women with irregular cycles. These women are easy to identify and many may have polycystic ovarian syndrome. Classifying high-risk phenotypes such as irregular menstruation creates opportunities to find novel early biomarkers, refine clinical screening protocols and potentially develop new risk reduction strategies. These efforts can lead to earlier detection and better survival for ovarian cancer. © 2016 UICC.

  9. Heavy ion induced mutation in arabidopsis

    Energy Technology Data Exchange (ETDEWEB)

    Tano, Shigemitsu [Japan Atomic Energy Research Inst., Takasaki, Gunma (Japan). Takasaki Radiation Chemistry Research Establishment

    1997-03-01

    Heavy ions, He, C, Ar and Ne were irradiated to the seeds of Arabidopsis thaliana for inducing the new mutants. In the irradiated generation (M{sub 1}), germination and survival rate were observed to estimate the relative biological effectiveness in relation to the LET including the inactivation cross section. Mutation frequencies were compared by using three kinds of genetic loci after irradiation with C ions and electrons. Several interesting new mutants were selected in the selfed progenies of heavy ion irradiated seeds. (author)

  10. Reference: 382 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ncentrations in the environment. To investigate how plants survive under conditions of B limitation, we cond...ronidase fusions indicated that NIP5;1 is strongly upregulated in the root elongation zone and the root hair zone under B limitation...e boric acid channel crucial for the B uptake required for plant growth and development under B limitation. ...The Arabidopsis major intrinsic protein NIP5;1 is essential for efficient boron uptake and plant development under boron limitation

  11. Reference: 462 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available . ATAF1 was one of the first identified NAC proteins in Arabidopsis. In present study, we characterized the ATAF1 express...ion and biological function in response to water deficit stress. ATAF1 mRNA express...ater treatment, suggesting a general role in drought stress responses. Transient expression analysis in onio...otein. Yeast transactivation analysis showed that ATAF1 had ability to activate reporter gene expression. Fu...ught response test. This ataf1 phenotype was coincident with the enhanced expression of stress responsive ma

  12. Reference: 453 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available ctor. We demonstrate that this protein functions as a transcriptional repressor in vivo. The express...ion of all members of the CYCLINA2 (CYCA2) family was reduced in an ILP1 overexpressing l...ine, and the mouse (Mus musculus) homolog of ILP1 repressed cyclin A2 expression in mouse NIH3T3 cells. T-DN...A insertion mutants of ILP1 showed reduced polyploidy and upregulated all CYCA2 express...ion. Furthermore, loss of CYCA2;1 expression induces an increase in polyploidy in Arabidopsis. We demo

  13. Reference: 387 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available Michael F et al. 2006 Jul. Plant Physiol. 141(3):957-65. Karyogamy, or nuclear fusion, is essential for sex...ual reproduction. In angiosperms, karyogamy occurs three times: twice during double fertilization of the egg...e two polar nuclei fuse to form the diploid central cell nucleus. The molecular mechanisms controlling karyoga...etected during megagametogenesis. nfd1 is also affected in karyogamy during double fertilization. Using tran...odes the Arabidopsis RPL21M protein and is required for karyogamy during female g

  14. Reference: 657 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available wth retardation. Double knockout atphb3 atphb4 plants were not viable, but transgenic lines overexpressing AtPHB3 or AtPHB...livier et al. 2007 Dec. Plant J. 52(5):850-64. The Arabidopsis thaliana genome expresses five evolutionarily... conserved prohibitin (PHB) genes that are divided into type-I (AtPHB3 and AtPHB4) and type-II (AtPHB1, AtPHB2 and AtPHB...6) classes, based on their phylogenetic relationships with yeast PHB1 and PHB...2, respectively. Yeast and animal PHBs are reported to have diverse roles in the cell cycle, mitocho

  15. Reference: 663 [Arabidopsis Phenome Database[Archive

    Lifescience Database Archive (English)

    Full Text Available opsis thaliana) is dominated by alkanes, secondary alcohols, and ketones, all tho...nt alleles was found to be devoid of secondary alcohols and ketones (mah1-1) or to contain much lower levels...topic accumulation of secondary alcohols and ketones in Arabidopsis leaf wax, where only traces of these com...pounds are found in the wild type. The newly formed leaf alcohols and ketones had midchain functional groups... catalyze the hydroxylation reaction leading from alkanes to secondary alcohols and possibly also a second h

  16. Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.

    Science.gov (United States)

    Riechmann, J L; Heard, J; Martin, G; Reuber, L; Jiang, C; Keddie, J; Adam, L; Pineda, O; Ratcliffe, O J; Samaha, R R; Creelman, R; Pilgrim, M; Broun, P; Zhang, J Z; Ghandehari, D; Sherman, B K; Yu, G

    2000-12-15

    The completion of the Arabidopsis thaliana genome sequence allows a comparative analysis of transcriptional regulators across the three eukaryotic kingdoms. Arabidopsis dedicates over 5% of its genome to code for more than 1500 transcription factors, about 45% of which are from families specific to plants. Arabidopsis transcription factors that belong to families common to all eukaryotes do not share significant similarity with those of the other kingdoms beyond the conserved DNA binding domains, many of which have been arranged in combinations specific to each lineage. The genome-wide comparison reveals the evolutionary generation of diversity in the regulation of transcription.

  17. Polyploidization increases meiotic recombination frequency in Arabidopsis

    Directory of Open Access Journals (Sweden)

    Rehmsmeier Marc

    2011-04-01

    Full Text Available Abstract Background Polyploidization is the multiplication of the whole chromosome complement and has occurred frequently in vascular plants. Maintenance of stable polyploid state over generations requires special mechanisms to control pairing and distribution of more than two homologous chromosomes during meiosis. Since a minimal number of crossover events is essential for correct chromosome segregation, we investigated whether polyploidy has an influence on the frequency of meiotic recombination. Results Using two genetically linked transgenes providing seed-specific fluorescence, we compared a high number of progeny from diploid and tetraploid Arabidopsis plants. We show that rates of meiotic recombination in reciprocal crosses of genetically identical diploid and autotetraploid Arabidopsis plants were significantly higher in tetraploids compared to diploids. Although male and female gametogenesis differ substantially in meiotic recombination frequency, both rates were equally increased in tetraploids. To investigate whether multivalent formation in autotetraploids was responsible for the increased recombination rates, we also performed corresponding experiments with allotetraploid plants showing strict bivalent pairing. We found similarly increased rates in auto- and allotetraploids, suggesting that the ploidy effect is independent of chromosome pairing configurations. Conclusions The evolutionary success of polyploid plants in nature and under domestication has been attributed to buffering of mutations and sub- and neo-functionalization of duplicated genes. Should the data described here be representative for polyploid plants, enhanced meiotic recombination, and the resulting rapid creation of genetic diversity, could have also contributed to their prevalence.

  18. Arabidopsis Growth Simulation Using Image Processing Technology

    Directory of Open Access Journals (Sweden)

    Junmei Zhang

    2014-01-01

    Full Text Available This paper aims to provide a method to represent the virtual Arabidopsis plant at each growth stage. It includes simulating the shape and providing growth parameters. The shape is described with elliptic Fourier descriptors. First, the plant is segmented from the background with the chromatic coordinates. With the segmentation result, the outer boundary series are obtained by using boundary tracking algorithm. The elliptic Fourier analysis is then carried out to extract the coefficients of the contour. The coefficients require less storage than the original contour points and can be used to simulate the shape of the plant. The growth parameters include total area and the number of leaves of the plant. The total area is obtained with the number of the plant pixels and the image calibration result. The number of leaves is derived by detecting the apex of each leaf. It is achieved by using wavelet transform to identify the local maximum of the distance signal between the contour points and the region centroid. Experiment result shows that this method can record the growth stage of Arabidopsis plant with fewer data and provide a visual platform for plant growth research.

  19. Diuretics Prime Plant Immunity in Arabidopsis thaliana

    Science.gov (United States)

    Noutoshi, Yoshiteru; Ikeda, Mika; Shirasu, Ken

    2012-01-01

    Plant activators are agrochemicals that activate the plant immune system, thereby enhancing disease resistance. Due to their prophylactic and durable effects on a wide spectrum of diseases, plant activators can provide synergistic crop protection when used in combination with traditional pest controls. Although plant activators have achieved great success in wet-rice farming practices in Asia, their use is still limited. To isolate novel plant activators applicable to other crops, we screened a chemical library using a method that can selectively identify immune-priming compounds. Here, we report the isolation and characterization of three diuretics, bumetanide, bendroflumethiazide and clopamide, as immune-priming compounds. These drugs upregulate the immunity-related cell death of Arabidopsis suspension-cultured cells induced with an avirulent strain of Pseudomonas syringae pv. tomato in a concentration-dependent manner. The application of these compounds to Arabidopsis plants confers disease resistance to not only the avirulent but also a virulent strain of the pathogen. Unlike salicylic acid, an endogenous phytohormone that governs disease resistance in response to biotrophic pathogens, the three diuretic compounds analyzed here do not induce PR1 or inhibit plant growth, showing potential as lead compounds in a practical application. PMID:23144763

  20. Local evolution of seed flotation in Arabidopsis.

    Directory of Open Access Journals (Sweden)

    Susana Saez-Aguayo

    2014-03-01

    Full Text Available Arabidopsis seeds rapidly release hydrophilic polysaccharides from the seed coat on imbibition. These form a heavy mucilage layer around the seed that makes it sink in water. Fourteen natural Arabidopsis variants from central Asia and Scandinavia were identified with seeds that have modified mucilage release and float. Four of these have a novel mucilage phenotype with almost none of the released mucilage adhering to the seed and the absence of cellulose microfibrils. Mucilage release was modified in the variants by ten independent causal mutations in four different loci. Seven distinct mutations affected one locus, coding the MUM2 β-D-galactosidase, and represent a striking example of allelic heterogeneity. The modification of mucilage release has thus evolved a number of times independently in two restricted geographical zones. All the natural mutants identified still accumulated mucilage polysaccharides in seed coat epidermal cells. Using nuclear magnetic resonance (NMR relaxometry their production and retention was shown to reduce water mobility into internal seed tissues during imbibition, which would help to maintain seed buoyancy. Surprisingly, despite released mucilage being an excellent hydrogel it did not increase the rate of water uptake by internal seed tissues and is more likely to play a role in retaining water around the seed.

  1. Impairment of Cellulose Synthases Required for Arabidopsis Secondary Cell Wall Formation Enhances Disease Resistance[W

    Science.gov (United States)

    Hernández-Blanco, Camilo; Feng, Dong Xin; Hu, Jian; Sánchez-Vallet, Andrea; Deslandes, Laurent; Llorente, Francisco; Berrocal-Lobo, Marta; Keller, Harald; Barlet, Xavier; Sánchez-Rodríguez, Clara; Anderson, Lisa K.; Somerville, Shauna; Marco, Yves; Molina, Antonio

    2007-01-01

    Cellulose is synthesized by cellulose synthases (CESAs) contained in plasma membrane–localized complexes. In Arabidopsis thaliana, three types of CESA subunits (CESA4/IRREGULAR XYLEM5 [IRX5], CESA7/IRX3, and CESA8/IRX1) are required for secondary cell wall formation. We report that mutations in these proteins conferred enhanced resistance to the soil-borne bacterium Ralstonia solanacearum and the necrotrophic fungus Plectosphaerella cucumerina. By contrast, susceptibility to these pathogens was not altered in cell wall mutants of primary wall CESA subunits (CESA1, CESA3/ISOXABEN RESISTANT1 [IXR1], and CESA6/IXR2) or POWDERY MILDEW–RESISTANT5 (PMR5) and PMR6 genes. Double mutants indicated that irx-mediated resistance was independent of salicylic acid, ethylene, and jasmonate signaling. Comparative transcriptomic analyses identified a set of common irx upregulated genes, including a number of abscisic acid (ABA)–responsive, defense-related genes encoding antibiotic peptides and enzymes involved in the synthesis and activation of antimicrobial secondary metabolites. These data as well as the increased susceptibility of ABA mutants (abi1-1, abi2-1, and aba1-6) to R. solanacearum support a direct role of ABA in resistance to this pathogen. Our results also indicate that alteration of secondary cell wall integrity by inhibiting cellulose synthesis leads to specific activation of novel defense pathways that contribute to the generation of an antimicrobial-enriched environment hostile to pathogens. PMID:17351116

  2. Glycosylphosphatidylinositol-anchored proteins are required for cell wall synthesis and morphogenesis in Arabidopsis.

    Science.gov (United States)

    Gillmor, C Stewart; Lukowitz, Wolfgang; Brininstool, Ginger; Sedbrook, John C; Hamann, Thorsten; Poindexter, Patricia; Somerville, Chris

    2005-04-01

    Mutations at five loci named PEANUT1-5 (PNT) were identified in a genetic screen for radially swollen embryo mutants. pnt1 cell walls showed decreased crystalline cellulose, increased pectins, and irregular and ectopic deposition of pectins, xyloglucans, and callose. Furthermore, pnt1 pollen is less viable than the wild type, and pnt1 embryos were delayed in morphogenesis and showed defects in shoot and root meristems. The PNT1 gene encodes the Arabidopsis thaliana homolog of mammalian PIG-M, an endoplasmic reticulum-localized mannosyltransferase that is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor. All five pnt mutants showed strongly reduced accumulation of GPI-anchored proteins, suggesting that they all have defects in GPI anchor synthesis. Although the mutants are seedling lethal, pnt1 cells are able to proliferate for a limited time as undifferentiated callus and do not show the massive deposition of ectopic cell wall material seen in pnt1 embryos. The different phenotype of pnt1 cells in embryos and callus suggest a differential requirement for GPI-anchored proteins in cell wall synthesis in these two tissues and points to the importance of GPI anchoring in coordinated multicellular growth.

  3. Dose calculations for irregular fields using three-dimensional first-scatter integration

    International Nuclear Information System (INIS)

    Boesecke, R.; Scharfenberg, H.; Schlegel, W.; Hartmann, G.H.

    1986-01-01

    This paper describes a method of dose calculations for irregular fields which requires only the mean energy of the incident photons, the geometrical properties of the irregular field and of the therapy unit, and the attenuation coefficient of tissue. The method goes back to an approach including spatial aspects of photon scattering for inhomogeneities for the calculation of dose reduction factors as proposed by Sontag and Cunningham (1978). It is based on the separation of dose into a primary component and a scattered component. The scattered component can generally be calculated for each field by integration over dose contributions from scattering in neighbouring volume elements. The quotient of this scattering contribution in the irregular field and the scattering contribution in the equivalent open field is then the correction factor for scattering in an irregular field. A correction factor for the primary component can be calculated if the attenuation of the photons in the shielding block is properly taken into account. The correction factor is simply given by the quotient of primary photons of the irregular field and the primary photons of the open field. (author)

  4. Observations of inner plasmasphere irregularities with a satellite-beacon radio-interferometer array

    International Nuclear Information System (INIS)

    Jacobson, A.R.; Hoogeveen, G.; Carlos, R.C.; Wu, G.; Fejer, B.G.; Kelley, M.C.

    1996-01-01

    A radio-interferometer array illuminated by 136-MHz beacons of several geosynchronous satellites has been used to study small (≥10 13 m -2 ) transient disturbances in the total electron content along the lines of sight to the satellites. High-frequency (f>3 mHz) electron content oscillations are persistently observed, particularly during night and particularly during geomagnetically disturbed periods. The oscillations move across the array plane at speeds in the range 200 endash 2000 m/s, with propagation azimuths that are strongly peaked in lobes toward the western half-plane. Detailed analysis of this azimuth behavior, involving comparison between observations on various satellite positions, indicates compellingly that the phase oscillations originate in radio refraction due to geomagnetically aligned plasma density perturbations in the inner plasmasphere. The motion of the phase perturbations across the array plane is caused by EXB drift of the plasma medium in which the irregularities are embedded. We review the statistics of 2.5 years of around-the-clock data on the local time, magnetic disturbance, seasonal, and line-of-sight variations of these observed irregularities. We compare the irregularities close-quote inferred electrodynamic drifts to what is known about midlatitude plasma drift from incoherent scatter. Finally, we show in detail how the observation of these irregularities provides a unique and complementary monitor of inner plasmasphere irregularity incidence and zonal drift.copyright 1996 American Geophysical Union

  5. Method of determining effects of heat-induced irregular refractive index on an optical system.

    Science.gov (United States)

    Song, Xifa; Li, Lin; Huang, Yifan

    2015-09-01

    The effects of an irregular refractive index on optical performance are examined. A method was developed to express a lens's irregular refractive index distribution. An optical system and its mountings were modeled by a thermomechanical finite element (FE) program in the predicted operating temperature range, -45°C-50°C. FE outputs were elaborated using a MATLAB optimization routine; a nonlinear least squares algorithm was adopted to determine which gradient equation best fit each lens's refractive index distribution. The obtained gradient data were imported into Zemax for sequential ray-tracing analysis. The root mean square spot diameter, modulation transfer function, and diffraction ensquared energy were computed for an optical system under an irregular refractive index and under thermoelastic deformation. These properties are greatly reduced by the irregular refractive index effect, which is one-third to five-sevenths the size of the thermoelastic deformation effect. Thus, thermal analyses of optical systems should consider not only thermoelastic deformation but also refractive index irregularities caused by inhomogeneous temperature.

  6. The nature and source of irregular discharges to stormwater entering Sydney estuary, Australia

    International Nuclear Information System (INIS)

    Beck, H.J.; Birch, G.F.

    2014-01-01

    Irregular discharges of polluted stormwater into drainage systems during base flow (no rainfall) result in acute ecological impacts within fluvial and estuarine environments. In this study, metal and TSS concentrations were significantly more variable during business hours of weekdays (i.e. high-business activity) than weekends/public holidays (i.e. low-business activity) within three highly-urbanised catchments of Sydney estuary (Australia), as determined by analysing multivariate dispersion (PERMDISP). Concentrations of TSS and all metals analysed (Al, Ca, Cu, Fe, Mg, Pb and Zn) were also significantly greater during high- than low-business periods within at least one of the three catchments. In no case were concentrations significantly higher during low- than high-business periods. This pattern of contamination supports the hypothesis that commercial and industrial sources are major contributors of irregular discharges of contamination to Sydney estuary. Irregular discharges and consequential ecological impacts may be effectively reduced in this environment by focussing management efforts on these activities. - Highlights: • Irregular discharges of pollution have acute impacts on aquatic ecosystems. • These discharges were thought to be made during low activity periods, such as night. • Pollution was more concentrated and erratic during high- than low-business periods. • Timing of pollution suggests commercial and industrial activities are major sources. • Discharges effectively reduced by managing commercial and industrial activities. - Previously unreported irregular, illegal discharges of polluted stormwater released to estuaries result in acute ecological impacts and are potentially related to commercial/industrial activities

  7. 30 MHz radar observations of artificial E region field-aligned plasma irregularities

    Directory of Open Access Journals (Sweden)

    D. L. Hysell

    2008-02-01

    Full Text Available Artificial E region field aligned irregularities (FAIs have been observed during heating experiments at the HAARP facility using a new 30 MHz coherent scatter radar imager deployed near Homer, Alaska. Irregularities were observed during brief experiments on three quiet days in July and August, 2007, when the daytime E region critical frequency was close to 3 MHz. Irregularities were consistently generated and detected during experiments with O-mode HF pumping on zenith with a 1-min on, 1-min off CW modulation. The scattering cross sections, rise, and fall times of the echoes were observed as well as their spectral properties. Results were found to be mainly in agreement with observations from other mid- and high-latitude sites with some discrepancies. Radar images of the irregularity-filled volume on one case exhibited clear variations in backscatter power and Doppler shift across the volume. The images furthermore show the emergence of a small irregularity-filled region to the south southwest of the main region in the approximate direction of magnetic zenith.

  8. Using forbidden ordinal patterns to detect determinism in irregularly sampled time series.

    Science.gov (United States)

    Kulp, C W; Chobot, J M; Niskala, B J; Needhammer, C J

    2016-02-01

    It is known that when symbolizing a time series into ordinal patterns using the Bandt-Pompe (BP) methodology, there will be ordinal patterns called forbidden patterns that do not occur in a deterministic series. The existence of forbidden patterns can be used to identify deterministic dynamics. In this paper, the ability to use forbidden patterns to detect determinism in irregularly sampled time series is tested on data generated from a continuous model system. The study is done in three parts. First, the effects of sampling time on the number of forbidden patterns are studied on regularly sampled time series. The next two parts focus on two types of irregular-sampling, missing data and timing jitter. It is shown that forbidden patterns can be used to detect determinism in irregularly sampled time series for low degrees of sampling irregularity (as defined in the paper). In addition, comments are made about the appropriateness of using the BP methodology to symbolize irregularly sampled time series.

  9. On the total irregularity strength of caterpillar with each internal vertex has degree three

    Science.gov (United States)

    Indriati, Diari; Rosyida, Isnaini; Widodo

    2018-04-01

    Let G be a simple, connected and undirected graph with vertex set V and edge set E. A total k-labeling f:V \\cup E\\to \\{1,2,\\ldots,k\\} is defined as totally irregular total k-labeling if the weights of any two different both vertices and edges are distinct. The weight of vertex x is defined as wt(x)=f(x)+{\\sum }xy\\in Ef(xy), while the weight of edge xy is wt(xy)=f(x)+f(xy)+f(y). A minimum k for which G has totally irregular total k-labeling is mentioned as total irregularity strength of G and denoted by ts(G). This paper contains investigation of totally irregular total k-labeling and determination of their total irregularity strengths for caterpillar graphs with each internal vertex between two stars has degree three. The results are ts({S}n,3,n)=\\lceil \\frac{2n}{2}\\rceil, ts({S}n,3,3,n)=\\lceil \\frac{2n+1}{2}\\rceil and ts({S}n,3,3,3,n)=\\lceil \\frac{2n+2}{2}\\rceil for n > 4:

  10. Simulating Seismic Wave Propagation in Viscoelastic Media with an Irregular Free Surface

    Science.gov (United States)

    Liu, Xiaobo; Chen, Jingyi; Zhao, Zhencong; Lan, Haiqiang; Liu, Fuping

    2018-05-01

    In seismic numerical simulations of wave propagation, it is very important for us to consider surface topography and attenuation, which both have large effects (e.g., wave diffractions, conversion, amplitude/phase change) on seismic imaging and inversion. An irregular free surface provides significant information for interpreting the characteristics of seismic wave propagation in areas with rugged or rapidly varying topography, and viscoelastic media are a better representation of the earth's properties than acoustic/elastic media. In this study, we develop an approach for seismic wavefield simulation in 2D viscoelastic isotropic media with an irregular free surface. Based on the boundary-conforming grid method, the 2D time-domain second-order viscoelastic isotropic equations and irregular free surface boundary conditions are transferred from a Cartesian coordinate system to a curvilinear coordinate system. Finite difference operators with second-order accuracy are applied to discretize the viscoelastic wave equations and the irregular free surface in the curvilinear coordinate system. In addition, we select the convolutional perfectly matched layer boundary condition in order to effectively suppress artificial reflections from the edges of the model. The snapshot and seismogram results from numerical tests show that our algorithm successfully simulates seismic wavefields (e.g., P-wave, Rayleigh wave and converted waves) in viscoelastic isotropic media with an irregular free surface.

  11. Morning Cortisol Levels and Perceived Stress in Irregular Shift Workers Compared with Regular Daytime Workers

    Directory of Open Access Journals (Sweden)

    Harri Lindholm

    2012-01-01

    Full Text Available The 24/7 work environment and irregular shifts may markedly enhance the psychological pressure of media work. Changes in the hypothalamic-pituitary-adrenal axis reflect adaptation to stress. We analysed the correlation between subjective stress, sleep, salivary cortisol, and melatonin hormones among Finnish media workers with regular daytime work (RDW and with irregular shift work (ISW while controlling confounders. From 874 employees with regular daytime work or with irregular shift work, 70 employees from both groups were randomly selected. The final number of employees with a complete salivary cortisol profile was 66 in the RDW group and 65 in the ISW group. Five saliva samples were gathered from each subject before and during a working day. The salivary cortisol level of the sample taken 60 minutes after awakening (T1 was compared to the salivary cortisol level taken immediately after awakening (T0, T1/T0 ratio. The ratio was higher in the ISW group than in RDW group. Irregular shift work (P<0.001, severe stress (P<0.05, and less sleep (P<0.05 were independently associated with an augmented cortisol response after awakening. A stressful work environment and irregular shift work enhance cortisol excretion after waking. In the long run, this may become detrimental to health.

  12. Application of the pothole DAF method to vehicles traversing periodic roadway irregularities

    Science.gov (United States)

    Pesterev, A. V.; Bergman, L. A.; Tan, C. A.; Yang, B.

    2005-01-01

    This paper is a sequel to the work discussed in Pesterev et al. (Journal of Sound and Vibration, in press). In that paper, it was suggested that the technique to determine the effect of a local road surface irregularity on the dynamics of a vehicle modelled as a linear multi-degree-of-freedom system relies on the so-called pothole dynamic amplification factor (DAF), which is a complex-valued function specific to the irregularity shape. This paper discusses the companion problem of how to determine the DAF function for an irregularity represented as a superposition of simpler ones. Another purpose of this paper is to demonstrate the application of the pothole DAF functions technique to finding a priori estimates of the effect of irregularities with a repeated structure. Specifically, we solve the problem of finding the conditions under which the dynamic effect of two identical potholes located one after another is greater than that due to the single pothole. We also find the estimate for the number of periods of a periodic irregularity that are sufficient in order to consider the oscillator response as steady state. The discussions are illustrated by numerical examples.

  13. Chloroplast genomes of Arabidopsis halleri ssp. gemmifera and Arabidopsis lyrata ssp. petraea: Structures and comparative analysis.

    Science.gov (United States)

    Asaf, Sajjad; Khan, Abdul Latif; Khan, Muhammad Aaqil; Waqas, Muhammad; Kang, Sang-Mo; Yun, Byung-Wook; Lee, In-Jung

    2017-08-08

    We investigated the complete chloroplast (cp) genomes of non-model Arabidopsis halleri ssp. gemmifera and Arabidopsis lyrata ssp. petraea using Illumina paired-end sequencing to understand their genetic organization and structure. Detailed bioinformatics analysis revealed genome sizes of both subspecies ranging between 154.4~154.5 kbp, with a large single-copy region (84,197~84,158 bp), a small single-copy region (17,738~17,813 bp) and pair of inverted repeats (IRa/IRb; 26,264~26,259 bp). Both cp genomes encode 130 genes, including 85 protein-coding genes, eight ribosomal RNA genes and 37 transfer RNA genes. Whole cp genome comparison of A. halleri ssp. gemmifera and A. lyrata ssp. petraea, along with ten other Arabidopsis species, showed an overall high degree of sequence similarity, with divergence among some intergenic spacers. The location and distribution of repeat sequences were determined, and sequence divergences of shared genes were calculated among related species. Comparative phylogenetic analysis of the entire genomic data set and 70 shared genes between both cp genomes confirmed the previous phylogeny and generated phylogenetic trees with the same topologies. The sister species of A. halleri ssp. gemmifera is A. umezawana, whereas the closest relative of A. lyrata spp. petraea is A. arenicola.

  14. Induction and characterization of Arabidopsis mutants by Ion beam

    International Nuclear Information System (INIS)

    Yoon, Y. H.; Choi, J. D.; Park, J. Y.; Lee, J. R.; Sohn, H. S.

    2008-03-01

    This study was conducted to search the proper conditions and times for irradiating proton beam to seeds generally used for induction of mutant. Arabidopsis as model plants has good characters that is a short generation time, producing a lot of seeds, sequenced genome, developed maker. This points were the best materials for plant breeding for this study. The data of inducing mutants of Arabidopsis is used to be applicate to crops have more longer generation that is the final goals of this study. The goals of this project were to inducing and characterizing arabidopsis mutants by the proton ion beam and γ-ray. As well as, the purpose of this study was securing more than 10 lines of arabidopsis mutants in this project and also to know the changed DNA structure of the mutants using the basic data for applying to the more study

  15. The Hidden Geometries of the Arabidopsis thaliana Epidermis

    KAUST Repository

    Staff, Lee; Hurd, Patricia; Reale, Lara; Seoighe, Cathal; Rockwood, Alyn; Gehring, Christoph A

    2012-01-01

    The quest for the discovery of mathematical principles that underlie biological phenomena is ancient and ongoing. We present a geometric analysis of the complex interdigitated pavement cells in the Arabidopsis thaliana (Col.) adaxial epidermis

  16. A potato NOA gene increased salinity tolerance in Arabidopsis ...

    African Journals Online (AJOL)

    ONOS

    2010-09-06

    Sep 6, 2010 ... in Arabidopsis thaliana salt stress responses and increased its salinity tolerance. Key words: StNOA1 ... (NR)-dependent pathways (Cueto et al., 1996; Delledonne ..... plastome-encoded proteins uncovers a mechanism for the.

  17. carboxylate synthase gene family in Arabidopsis, rice, grapevine

    African Journals Online (AJOL)

    Yomi

    2012-01-16

    Jan 16, 2012 ... evolutionary relationships of ACS genes in the four plant species. Chromosomal .... classification was consistent with the report from. Jakubowicz et al. ..... Analysis of the genome sequence of the flowering plant Arabidopsis ...

  18. Induction and characterization of Arabidopsis mutants by Ion beam

    Energy Technology Data Exchange (ETDEWEB)

    Yoon, Y. H.; Choi, J. D.; Park, J. Y.; Lee, J. R.; Sohn, H. S. [Gyeongbuk Institute for Bio Industry, Andong (Korea, Republic of)

    2008-03-15

    This study was conducted to search the proper conditions and times for irradiating proton beam to seeds generally used for induction of mutant. Arabidopsis as model plants has good characters that is a short generation time, producing a lot of seeds, sequenced genome, developed maker. This points were the best materials for plant breeding for this study. The data of inducing mutants of Arabidopsis is used to be applicate to crops have more longer generation that is the final goals of this study. The goals of this project were to inducing and characterizing arabidopsis mutants by the proton ion beam and {gamma}-ray. As well as, the purpose of this study was securing more than 10 lines of arabidopsis mutants in this project and also to know the changed DNA structure of the mutants using the basic data for applying to the more study

  19. Light responses in Photoperiodism in Arabidopsis thaliana

    Energy Technology Data Exchange (ETDEWEB)

    Anthony R. Cashmore

    2006-08-01

    ADO1: An Arabidopsis blue light photoreceptor We have reported the characterization of an Arabidopsis gene encoding the ADAGIO 1 (ADO1) protein (Jarillo et al., 2001a). ADO1 contains a LOV domain, similar to WHITE COLLAR 1 (WC1), a photoreceptor for entrainment of Neurospora circadian rhythms (Froehlich et al., 2002), as well as PHOT1 and PHOT2, the blue light photoreceptors for phototropism (Briggs et al., 2001; Christie et al., 1998; Jarillo et al., 2001b; Kinoshita et al., 2001). Loss of function ado1 mutants show an unusually long periodicity for their free running circadian rhythm (Jarillo et al., 2001a). This observation holds for plants grown under white light as well as blue light and surprisingly, plants grown under red light also show altered circadian properties. The similarity of the LOV domain of ADO1 to those of PHOT1, PHOT2 and WC1 (known flavoprotein photoreceptors) as well as the genetic and molecular properties of ADO1, indicate that ADO1 is likely a new class of blue light photoreceptor. Indeed, the LOV domain of the related FKF1/ADO3 has been shown to bind FMN, and exhibit the in vitro photochemistry characteristic of PHOT1 (Imaizumi et al., 2003). Furthermore, ZTL/ADO1 has been shown to participate in the circadian and proteasome mediated degradation of the Arabidopsis clock protein, TOC1 (Mas et al., 2003). We also showed that the ado1 mutation selectively confers hypersensitivity to red light — when grown under red light (but not blue light) the ado1 mutant possesses an unusually short hypocotyl. This red light hypersensivity is even more severe in a triple ado1 ado2 ado3 mutant — ADO2 and ADO3 being the two other members of this ADAGIO gene family. This finding of a mutant phenotype under red light is somewhat unexpected for a protein thought to function as a photoreceptor for blue light. We have pursued our studies of ADO1 by preparing a mutant gene for which we have altered the codon for the cysteine residue conserved in all LOV

  20. Actors and factors in the governance of irregular migration : a comparative analysis of Albanian, Georgian, Ukrainian, Pakistani and Afghani irregular flows to Greece

    OpenAIRE

    TRIANDAFYLLIDOU, Anna

    2015-01-01

    Proceedings from the conference "Governing Irregular Migration : States, Actors and Intermediaries", Athens 8-9 July 2015 The loss of over a thousand human lives in the effort to cross the Mediterranean during April 2015 has once again drawn media and political attention to the challenges that the EU is facing in its efforts to govern migration and asylum. However, what seems to be still far from complete is our (the experts and the politicians) understanding of what drives people to put t...