WorldWideScience

Sample records for antihydrogen formation dynamics

  1. Resonant antihydrogen formation in antiproton–positronium collisions

    Science.gov (United States)

    Lazauskas, R.; Hervieux, P.-A.; Dufour, M.; Valdes, M.

    2016-05-01

    We study the influence of narrow resonances on antihydrogen formation cross sections via the three-body reaction \\bar{{{p}}}+{{Ps}}*\\to {\\bar{{{H}}}}*+{{{e}}}-. The latter is of interest for the gravitational behavior of antihydrogen at rest experiment that will be performed at CERN in the near future. The complex scaling method is employed to compute the positions and widths of these resonances, whereas the Kohn-variational principle is used for the determination of the scattering cross sections. A very good agreement is found with available theoretical results. The impact of these resonances on the cross section is analyzed.

  2. Formation of A Cold Antihydrogen Beam in AEGIS For Gravity Measurements

    CERN Document Server

    Testera, G; Bonomi, G; Boscolo, I; Brambilla, N; Brusa, R S; Byakov, V M; Cabaret, L; Canali, C; Carraro, C; Castelli, F; Cialdi, S; de Combarieu, M; Comparat, D; Consolati, G; Djourelov, N; Doser, M; Drobychev, G; Dupasquier, A; Fabris, D; Ferragut, R; Ferrari, G; Fischer, A; Fontana, A; Forget, P; Formaro, L; Lunardon, M; Gervasini, A; Giammarchi, M G; Gninenko, S N; Gribakin, G; Heyne, R; Hogan, S D; Kellerbauer, A G; Krasnicky, D; Lagomarsino, V; Manuzio, G; Mariazzi, S; Matveev, V A; Merkt, F; Moretto, S; Morhard, C; Nebbia, G; Nédélec, P; Oberthaler, M K; Pari, P; Petracek, V; Prevedelli, M; Al-Qaradawi, I Y; Quasso, F; Rohne, O; Pesente, S; Rotondi, A; Stapnes, S; Sillou, D; Stepanov, S V; Stroke, Hinko Henry; Tino, G; Vairo, Antonio; Viesti, G; Walters, H; Warring, U; Zavatarelli, S; Zenoni, A; Zvezhinskij, D S

    2008-01-01

    The formation of the antihydrogen beam in the AEGIS experiment through the use of inhomogeneous electric fields is discussed and simulation results including the geometry of the apparatus and realistic hypothesis about the antihydrogen initial conditions are shown. The resulting velocity distribution matches the requirements of the gravity experiment. In particular it is shown that the inhomogeneous electric fields provide radial cooling of the beam during the acceleration.

  3. Trapped antihydrogen

    CERN Document Server

    Andresen, G B; Baquero-Ruiz, M; Bertsche, W; Bowe, P D; Butler, E; Cesar, C L; Chapman, S; Charlton, M; Deller, A; Eriksson, S; Fajans, J; Friesen, T; Fujiwara, M C; Gill, D R; Gutierrez, A; Hangst, J S; Hardy, W N; Hayden, M E; Humphries, A J; Hydomako, R; Jenkins, M J; Jonsell, S; Jørgensen, L V; Kurchaninov, L; Madsen, N; Menary, S; Nolan, P; Olchanski, K; Olin, A; Povilus, A; Pusa, P; Robicheaux, F; Sarid, E; Seif el Nasr, S; Silveira, D M; So, C; Storey, J W; Thompson, R I; van der Werf, D P; Wurtele, J S; Yamazaki, Y

    2010-01-01

    Antimatter was first predicted in 1931, by Dirac. Work with highenergy antiparticles is now commonplace, and anti-electrons are used regularly in the medical technique of positron emission tomography scanning. Antihydrogen, the bound state of an antiproton and a positron, has been produced at low energies at CERN (the European Organization for Nuclear Research) since 2002. Antihydrogen is of interest for use in a precision test of nature’s fundamental symmetries. The charge conjugation/parity/time reversal (CPT) theorem, a crucial part of the foundation of the standard model of elementary particles and interactions, demands that hydrogen and antihydrogen have the same spectrum. Given the current experimental precision of measurements on the hydrogen atom (about two parts in 1014 for the frequency of the 1s-to-2s transition), subjecting antihydrogen to rigorous spectroscopic examination would constitute a compelling, model-independent test of CPT. Antihydrogen could also be used to study the gravitational be...

  4. Trapped antihydrogen

    CERN Document Server

    Butler, E; Ashkezari, M D; Baquero-Ruiz, M; Bertsche, W; Bowe, P D; Cesar, C L; Chapman, S; Charlton, M; Deller, A; Eriksson, S; Fajans, J; Friesen, T; Fujiwara, M C; Gill, D R; Gutierrez, A; Hangst, J S; Hardy, W N; Hayden, M E; Humphries, A J; Hydomako, R; Jenkins, M J; Jonsell, S; Jørgensen, L V; Kemp, S L; Kurchaninov, L; Madsen, N; Menary, S; Nolan, P; Olchanski, K; Olin, A; Povilus, A; Pusa, P; Rasmussen, C Ø; Robicheaux, F; Sarid, E; Seif el Nasr, S; Silveira, D M; So, C; Storey, J W; Thompson, R I; van der Werf, D P; Wurtele, J S; Yamazaki,Y

    2012-01-01

    Precision spectroscopic comparison of hydrogen and antihydrogen holds the promise of a sensitive test of the Charge-Parity-Time theorem and matter-antimatter equivalence. The clearest path towards realising this goal is to hold a sample of antihydrogen in an atomic trap for interrogation by electromagnetic radiation. Achieving this poses a huge experimental challenge, as state-of-the-art magnetic-minimum atom traps have well depths of only ∼1 T (∼0.5 K for ground state antihydrogen atoms). The atoms annihilate on contact with matter and must be ‘born’ inside the magnetic trap with low kinetic energies. At the ALPHA experiment, antihydrogen atoms are produced from antiprotons and positrons stored in the form of non-neutral plasmas, where the typical electrostatic potential energy per particle is on the order of electronvolts, more than 104 times the maximum trappable kinetic energy. In November 2010, ALPHA published the observation of 38 antiproton annihilations due to antihydrogen atoms that had been ...

  5. Study of the anti-hydrogen atom and ion formation in the collisions antiproton-positronium

    International Nuclear Information System (INIS)

    The future CERN experiment called GBAR intends to measure the gravitational acceleration of antimatter on Earth using cold (neV) anti-hydrogen atoms undergoing a free fall. The experiment scheme first needs to cool anti-hydrogen positive ions, obtained thanks to two consecutive reactions occurring when an antiproton beam collides with a dense positronium cloud.The present thesis studies these two reactions in order to optimise the production of the anti-ions. The total cross sections of both reactions have been computed in the framework of a perturbation theory model (Continuum Distorted Wave - Final State), in the range 0 to 30 keV antiproton kinetic energy; several excited states of positronium have been investigated. These cross sections have then been integrated to a simulation of the interaction zone where antiprotons collide with positronium; the aim is to find the optimal experimental parameters for GBAR. The results suggest that the 2P, 3D or, to a lower extend, 1S states of positronium should be used, respectively with 2, less than 1 or 6 keV antiprotons. The importance of using short pulses of antiprotons has been underlined; the positronium will have to be confined in a tube of 20 mm length and 1 mm diameter. In the prospect of exciting the 1S-3D two-photon transition in positronium at 410 nm, a pulsed laser system had already been designed. It consists in the frequency doubling of an 820 nm pulsed titanium-sapphire laser. The last part of the thesis has been dedicated to the realisation of this laser system, which delivers short pulses (9 ns) of 4 mJ energy at 820 nm. (author)

  6. The ATHENA antihydrogen apparatus

    International Nuclear Information System (INIS)

    The ATHENA apparatus that recently produced and detected the first cold antihydrogen atoms is described. Its main features, which are described herein, are: an external positron accumulator, making it possible to accumulate large numbers of positrons; a separate antiproton catching trap, optimizing the catching, cooling and handling of antiprotons; a unique high resolution antihydrogen annihilation detector, allowing an clear determination that antihydrogen has been produced; an open, modular design making variations in the experimental approach possible and a ''nested'' Penning trap situated in a cryogenic, 3T magnetic field environment used for the mixing of the antiprotons and positrons

  7. Detection of Trapped Antihydrogen

    CERN Document Server

    Hydomako, Richard Allan

    The ALPHA experiment is an international effort to produce, trap, and perform precision spectroscopic measurements on antihydrogen (the bound state of a positron and an antiproton). Based at the Antiproton Decelerator (AD) facility at CERN, the ALPHA experiment has recently magnetically confined antihydrogen atoms for the first time. A crucial element in the observation of trapped antihydrogen is ALPHA’s silicon vertexing detector. This detector contains sixty silicon modules arranged in three concentric layers, and is able to determine the three-dimensional location of the annihilation of an antihydrogen atom by reconstructing the trajectories of the produced annihilation products. This dissertation focuses mainly on the methods used to reconstruct the annihilation location. Specifically, the software algorithms used to identify and extrapolate charged particle tracks are presented along with the routines used to estimate the annihilation location from the convergence of the identified tracks. It is shown...

  8. Confinement of antihydrogen for 1000 seconds

    CERN Document Server

    Andresen, G B; Baquero-Ruiz, M; Bertsche, W; Butler, E; Cesar, C L; Deller, A; Eriksson, S; Fajans, J; Friesen, T; Fujiwara, M C; Gill, D R; Gutierrez, A; Hangst, J S; Hardy, W N; Hayano, R S; Hayden, M E; Humphries, A J; Hydomako, R; Jonsell, S; Kemp, S; Kurchaninov, L; Madsen, N; Menary, S; Nolan, P; Olchanski, K; Olin, A; Pusa, P; Rasmussen, C Ø; Robicheaux, F; Sarid, E; Silveira, D M; So, C; Storey, J W; Thompson, R I; van der Werf, D P; Wurtele, J S; Yamazaki, Y

    2011-01-01

    Atoms made of a particle and an antiparticle are unstable, usually surviving less than a microsecond. Antihydrogen, made entirely of antiparticles, is believed to be stable, and it is this longevity that holds the promise of precision studies of matter-antimatter symmetry. We have recently demonstrated trapping of antihydrogen atoms by releasing them after a confinement time of 172 ms. A critical question for future studies is: how long can anti-atoms be trapped? Here we report the observation of anti-atom confinement for 1000 s, extending our earlier results by nearly four orders of magnitude. Our calculations indicate that most of the trapped anti-atoms reach the ground state. Further, we report the first measurement of the energy distribution of trapped antihydrogen which, coupled with detailed comparisons with simulations, provides a key tool for the systematic investigation of trapping dynamics. These advances open up a range of experimental possibilities, including precision studies of CPT symmetry and ...

  9. Antihydrogen Experiment Gravity Interferometry Spectroscopy

    CERN Multimedia

    Gerber, S; Tietje, I C; Allkofer, Y R; Trezzi, D; Dassa, L; Rienacker, B; Khalidova, O; Ferrari, G; Krasnicky, D; Perini, D; Cerchiari, G; Belov, A; Boscolo, I; Sacerdoti, M G; Ferragut, R O; Nedelec, P; Testera, G; Hinterberger, A; Al-qaradawi, I; Malbrunot, C L S; Brusa, R S; Prelz, F; Manuzio, G; Riccardi, C; Fontana, A; Genova, P; Haider, S; Haug, F; Merkt, F; Turbabin, A; Castelli, F; Doser, M; Penasa, L; Gninenko, S; Cataneo, F; Zenoni, A; Cabaret, L; Comparat, D P; Zmeskal, J; Scampoli, P; Dudarev, A; Kellerbauer, A G; Lagomarsino, V E; Mariazzi, S; Fesel, J V; Nesteruk, K P; Eisel, W T; Carraro, C; Zavatarelli, S M

    The AEGIS experiment (Antihydrogen Experiment: Gravity, Interferometry, Spectroscopy) has the aim of carrying out the first measurement of the gravitational interaction of antimatter to a precision of 1%, by applying techniques from atomic physics, laser spectroscopy and interferometry to a beam of antihydrogen atoms. A further goal of the experiment is to carry out spectroscopy of the antihydrogen atoms in flight.

  10. Physics of antihydrogen

    International Nuclear Information System (INIS)

    The CPT-transformation relates particles to antiparticles, atoms to antiatoms, elements to antielements, in general matter to antimatter. No CPT violation has yet been observed. The present-day theory of the universe states that during the Big Bang exactly the same amount of matter and antimatter was produced. Under such conditions and if both - matter and antimatter were subject to the same laws of physics - then the world would not exist. Why we owe our existence to a tiny residue of matter over antimatter is one of the exciting questions of physics. Two collaborations (ATHENA and ATRAP) at the antiproton decelerator (AD) of CERN want to test the CPT-invariance in high precision comparison of the antihydrogen and antihydrogen systems. Both working groups announced first results of the production of cold antihydrogen during the second half of 2002. (author)

  11. ERC supports antihydrogen research

    CERN Multimedia

    Katarina Anthony

    2013-01-01

    As part of a Europe-wide effort to promote high-level research, the European Research Council (ERC) has awarded a €2.14 million grant to ALPHA spokesperson Jeffrey Hangst, which will further the collaboration’s study of the antihydrogen spectrum. The grant will be used to purchase laser spectroscopy equipment for the new ALPHA-2 set-up.   ALPHA Spokesperson, Jeffrey Hangst, in front of the new ALPHA-2 set-up. The incorporation of lasers into ALPHA-2 will allow the team to take precise measurements of trapped antihydrogen. Among the new equipment financed by the grant will be a high-precision laser and stabilisation system to study the transition from the ground state to the first excited state in antihydrogen. As this spectral line is very well known in hydrogen, its study in antihydrogen will provide essential data for matter/antimatter symmetry investigations. “The grant has come at a perfect time for us,” says Jeffrey Hangst. “We wil...

  12. Observation of relativistic antihydrogen atoms

    Science.gov (United States)

    Blanford, Glenn Delfosse, Jr.

    1997-09-01

    An observation of relativistic antihydrogen atoms is reported in this dissertation. Experiment 862 at Fermi National Accelerator Laboratory observed antihydrogen atoms produced by the interaction of a circulating beam of high momentum (3 production is outlined within. The cross section corresponds to the process where a high momentum antiproton causes e+e/sp- pair creation near a nucleus with the e+ being captured by the antiproton. Antihydrogen is the first atom made exclusively of antimatter to be detected. The observation experiment's results are the first step towards an antihydrogen spectroscopy experiment which would measure the n = 2 Lamb shift and fine structure.

  13. An Improved Antihydrogen Trap

    OpenAIRE

    Kalra, Rita Rani

    2015-01-01

    The recent demonstration of trapped atomic antihydrogen for 15 to 1000 seconds is a milestone towards precise spectroscopy for tests of CPT invariance. The confinement of a total of 105±21 atoms in a quadrupole magnetic trap was made possible by several improved methods. Improved accumulation techniques give us the largest numbers of constituent particles yet: up to 10 million antiprotons and several billion positrons. A novel cooling protocol leads to 3.5 K antiprotons, the coldest ever obse...

  14. Antihydrogen Production and Precision Experiments The ATHENA Collaboration

    CERN Multimedia

    Filippini, V

    2002-01-01

    The ATHENA (AnTiHydrogEN Apparatus) experiment has the goal of producing slow antihydrogen atoms and comparing their physical properties to those of hydrogen. For example, the measurement of the 1S-2S transition offers the possibility for comparing hydrogen and antihydrogen to a precision of 1 part in 10$^{15}$, owing to the long lifetime of the metastable 2S state (122 msec). This would be the most precise test of CPT invariance in the lepton and baryon sector. The first phase of the experiment, which has been installed and commissioned at the Antiproton Decelerator (AD) - is devoted to the study of antihydrogen production. For this purpose, about 10$^{5}$ antiprotons (p=100 MeV/c ) are trapped and cooled to milli-eV energies. Independently, about 10$^{8}$ low energy positrons per minute are collected in the positron accumulator, using a Na-22 source (2 GBq). Formation of antihydrogen will take place in the recombination region, where the antiproton cloud is made to interact with the dense positron plasma tr...

  15. Antihydrogen makes a fleeting debut

    CERN Multimedia

    Goss Levi, B

    1996-01-01

    The generation of antihydrogens by merging positrons and antiprotons at the CERN laboratory lasted only for 37 ns before they were destroyed by electrons in the detector. There was insufficient time for comparing the antimatter with hydrogen.

  16. ANTIHYDROGEN PRODUCTION AND PRECISION SPECTROSCOPY WITH ATHENA/AD-1

    Energy Technology Data Exchange (ETDEWEB)

    M. HOLZSCHEITER; C. AMSLER; ET AL

    2000-11-01

    CPT invariance is a fundamental property of quantum field theories in flat space-time. Principal consequences include the predictions that particles and their antiparticles have equal masses and lifetimes, and equal and opposite electric charges and magnetic moments. It also follows that the fine structure, hyperfine structure, and Lamb shifts of matter and antimatter bound systems should be identical. It is proposed to generate new stringent tests of CPT using precision spectroscopy on antihydrogen atoms. An experiment to produce antihydrogen at rest has been approved for running at the Antiproton Decelerator (AD) at CERN. We describe the fundamental features of this experiment and the experimental approach to the first phase of the program, the formation and identification of low energy antihydrogen.

  17. Muonic Anti-hydrogen Formation in Low-energy Three-body Reactions. Slow bar{p}+(μ^{+}μ^{-})_{1s}} collision

    Science.gov (United States)

    Sultanov, Renat A.; Guster, Dennis

    2013-08-01

    A few-body type computation is performed for a three-charge-particle collision with participation of a slow antiproton and a muonic muonium atom (true muonium), i.e. a bound state of two muons in its ground state. The total cross section of the following reaction , where muonic anti-hydrogen is a bound state of an antiproton and positive muon, is computed in the framework of a set of coupled two-component Faddeev-Hahn-type equation. A better known negative muon transfer low energy three-body reaction: is also computed as a test system. Here, t+ is triton and d+ is deuterium.

  18. Numerical simulations of hyperfine transitions of antihydrogen

    Energy Technology Data Exchange (ETDEWEB)

    Kolbinger, B., E-mail: bernadette.kolbinger@oeaw.ac.at; Capon, A.; Diermaier, M.; Lehner, S. [Stefan Meyer Institute for Subatomic Physics, Austrian Academy of Sciences (Austria); Malbrunot, C. [CERN (Switzerland); Massiczek, O.; Sauerzopf, C.; Simon, M. C.; Widmann, E. [Stefan Meyer Institute for Subatomic Physics, Austrian Academy of Sciences (Austria)

    2015-08-15

    One of the ASACUSA (Atomic Spectroscopy And Collisions Using Slow Antiprotons) collaboration’s goals is the measurement of the ground state hyperfine transition frequency in antihydrogen, the antimatter counterpart of one of the best known systems in physics. This high precision experiment yields a sensitive test of the fundamental symmetry of CPT. Numerical simulations of hyperfine transitions of antihydrogen atoms have been performed providing information on the required antihydrogen events and the achievable precision.

  19. First Attempts at Antihydrogen Trapping in ALPHA

    CERN Document Server

    Andresen, G B; Bowe, P D; Bray, C C; Butler, E; Cesar, C L; Chapman, S; Charlton, M; Fajans, J; Funakoshi, R; Gill, D R; Hangst, J S; Hardy, W N; Hayano, R S; Hayden, M E; Humphries, A J; Hydomako, R; Jenkins, M J; Jørgensen, L V; Kurchaninov, L; Lambo, R; Madsen, N; Nolan, P; Olchanski, K; Olin, A; Page, R D; Povilus, A; Pusa, P; Robicheaux, F; Sarid, E; Seif El Nasr, S; Silveira, D M; Storey, J W; Thompson, R I; Van der Werf, D P; Wasilenko, L; Wurtele, J S; Yamazaki, Y; Fujiwara, M C

    2008-01-01

    We discuss aspects of antihydrogen studies, that relate to particle physics ideas and techniques, within the context of the ALPHA experiment at CERN's Antiproton Decelerator facility. We review the fundamental physics motivations for antihydrogen studies, and their potential physics reach. We argue that initial spectroscopy measurements, once antihydrogen is trapped, could provide competitive tests of CPT, possibly probing physics at the Planck Scale. We discuss some of the particle detection techniques used in ALPHA. Preliminary results from commissioning studies of a partial system of the ALPHA Si vertex detector are presented, the results of which highlight the power of annihilation vertex detection capability in antihydrogen studies.

  20. Tests of fundamental symmetries with trapped antihydrogen

    DEFF Research Database (Denmark)

    Rasmussen, Chris Ørum

    2016-01-01

    questions in modern physics. Since 2010, it has been possible to perform such tests on magnetically trapped antihydrogen, and this work reports on several recent studies. Analysing the temporal and spatial distribution of annihilations as antihydrogen atoms are released from the magnetic trap, we set limits...... any putatively charged antihydrogen atoms. From the lack of response to these potentials, we can set a limit for the charge of antihydrogen at |Q| < 7.1 E-10 e. From this measurement, the limit on the positron charge anomaly can also be improved. As the main focus of this work, we consider the...

  1. ATHENA: an actual antihydrogen annihilation

    CERN Multimedia

    2002-01-01

    This is an image of an actual matter-antimatter annihilation due to an atom of antihydrogen in the ATHENA experiment, located on the Antiproton Decelerator (AD) at CERN since 2001. The antiproton produces four charged pions (yellow) whose positions are given by silicon microstrips (pink) before depositing energy in CsI crystals (yellow cubes). The positron also annihilates to produce back-to-back gamma rays (red).

  2. ATRAP on the road to cold antihydrogen

    CERN Document Server

    2001-01-01

    The ATRAP collaboration has succeeded in slowing down antiprotons with positrons, the two ingredients of antihydrogen atoms. This is an important step towards capturing and studying antihydrogen. Members of the ATRAP Collaboration with the apparatus that first demonstrated positron cooling. It was in extremis. Last December, during the six short hours of beam remaining to them, ATRAP researchers achieved their initial goal. For the first time, positrons were used to cool antiprotons. To what end, you may ask? The answer is much simpler than the process: physicists think that this is the most effective means of observing antihydrogen. Recall that an antihydrogen atom is composed of an antiproton and a positron. The first atoms of antihydrogen were produced five years ago at LEAR. But their small number and the brevity of their existence made it impossible to study them in depth. However, to understand the subtle nuances between matter and antimatter, which would explain the imbalance in nature between the tw...

  3. Production of antihydrogen via double charge exchange

    International Nuclear Information System (INIS)

    Spectroscopy of the 1S-2S transition of antihydrogen confined in a neutral atom trap and comparison with the equivalent spectral line in hydrogen will provide an accurate test of CPT symmetry and the first one in a mixed baryon-lepton system. Also, with neutral antihydrogen atoms, the gravitational interaction between matter and antimatter can be tested unperturbed by the much stronger Coulomb forces. Antihydrogen is regularly produced at CERN's Antiproton Decelerator by three-body-recombination (TBR) of one antiproton and two positrons. The method requires injecting antiprotons into a cloud of positrons, which raises the average temperature of the antihydrogen atoms produced way above the typical 0.5 K trap depths of neutral atom traps. Therefore only very few antihydrogen atoms can be confined at a time. Precision measurements, like laser spectroscopy, will greatly benefit from larger numbers of simultaneously trapped antihydrogen atoms. Therefore, the ATRAP collaboration developed a different production method that has the potential to create much larger numbers of cold, trappable antihydrogen atoms. Positrons and antiprotons are stored and cooled in a Penning trap in close proximity. Laser excited cesium atoms collide with the positrons, forming Rydberg positronium, a bound state of an electron and a positron. The positronium atoms are no longer confined by the electric potentials of the Penning trap and some drift into the neighboring cloud of antiprotons where, in a second charge exchange collision, they form antihydrogen. The antiprotons remain at rest during the entire process, so much larger numbers of trappable antihydrogen atoms can be produced. Laser excitation is necessary to increase the efficiency of the process since the cross sections for charge-exchange collisions scale with the fourth power of the principal quantum number n. This method, named double charge-exchange, was demonstrated by ATRAP in 2004. Since then, ATRAP constructed a new combined

  4. Whispering Gallery States of Antihydrogen

    CERN Document Server

    Voronin, A Yu; Reynaud, S

    2011-01-01

    We present a theoretical study of the motion of an antihydrogen atom ($\\bar{H}$) near a curved material surface. We predict existence of $\\bar{H}$ atom long-living quasistationary states, localized near the surface due to quantum reflection from the Casimir-Polder/van der Waals potential. Such states are an atom-wave analog of the whispering gallery modes, known in acoustics, optics and neutron physics. We argue that the whispering gallery states of $\\bar{H}$ atoms could be regarded as a full analog of recently predicted gravitational states of $\\bar{H}$, where the centrifugal potential plays a role of the linear gravitational potential.

  5. Antihydrogen for precision tests in physics

    CERN Document Server

    Charlton, M; Jørgensen, L V; Madsen, N; van der Werf, D P

    2008-01-01

    The creation of atoms of antihydrogen under controlled conditions has opened up a new era in physics with antimatter. We describe the experimental realisation of low energy antihydrogen, via the mixing of carefully prepared clouds of positrons and antiprotons, and some of the progress that has been made in the last few years in characterising properties of the nascent anti-atoms. Ongoing efforts aimed at trapping the anti-atoms in magnetic field minima are discussed. Some of the motivations for undertaking experiments with antihydrogen are presented.

  6. Getting to grips with antihydrogen

    CERN Multimedia

    Katarina Anthony

    2012-01-01

    In June 2011, the ALPHA Collaboration announced that they had successfully managed to trap and hold atoms of antimatter for 1000 seconds. Last week they announced that their success in changing the internal state of antihydrogen and made the first ever measurement of its spectrum. The Collaboration is now installing an all-new experimental set-up – ALPHA-2 – and shows no signs of slowing down its investigations into the anti-world.   The ALPHA experiment hall. Newspapers and magazines around the world described the recent ALPHA announcement as the first step towards explaining why antimatter and matter did not cancel each other out in the first instances of creation, that is, why our universe of matter exists. Understanding the behaviour of matter and antimatter can help scientists solve this conundrum. With this in mind, the ALPHA collaboration has begun the study of the antihydrogen spectrum. So far, the Collaboration has been focused on proving that they can alter the ...

  7. The ASACUSA CUSP: an antihydrogen experiment

    Energy Technology Data Exchange (ETDEWEB)

    Kuroda, N., E-mail: kuroda@phys.c.u-tokyo.ac.jp [University of Tokyo, Graduate School of Arts and Sciences (Japan); Ulmer, S. [RIKEN, Ulmer Initiative Research Unit (Japan); Murtagh, D. J.; Gorp, S. Van [RIKEN, Atomic Physics Laboratory (Japan); Nagata, Y. [Tokyo University of Agriculture and Technology, Department of Applied Physics (Japan); Diermaier, M. [Boltzmangasse 3, Stefan Meyer Institut für Subatomare Physik (Austria); Federmann, S. [CERN (Switzerland); Leali, M. [Università di Brescia & Instituto Nazionale di Fisica Nucleare, Dipartimento di Chimica e Fisica per l’Ingegneria e per i Materiali (Italy); Malbrunot, C. [CERN (Switzerland); Mascagna, V. [Università di Brescia & Instituto Nazionale di Fisica Nucleare, Dipartimento di Chimica e Fisica per l’Ingegneria e per i Materiali (Italy); Massiczek, O. [Boltzmangasse 3, Stefan Meyer Institut für Subatomare Physik (Austria); Michishio, K. [Tokyo University of Science, Department of Physics (Japan); Mizutani, T. [University of Tokyo, Graduate School of Arts and Sciences (Japan); Mohri, A. [Kyoto University, Graduate School of Human and Environmental Sciences (Japan); Nagahama, H.; Ohtsuka, M. [University of Tokyo, Graduate School of Arts and Sciences (Japan); Radics, B. [RIKEN, Atomic Physics Laboratory (Japan); Sakurai, S. [Hiroshima University, Graduate School of Advanced Science of Matter (Japan); Sauerzopf, C.; Suzuki, K. [Boltzmangasse 3, Stefan Meyer Institut für Subatomare Physik (Austria); and others

    2015-11-15

    In order to test CPT symmetry between antihydrogen and its counterpart hydrogen, the ASACUSA collaboration plans to perform high precision microwave spectroscopy of ground-state hyperfine splitting of antihydrogen atom in-flight. We have developed an apparatus (“cusp trap”) which consists of a superconducting anti-Helmholtz coil and multiple ring electrodes. For the preparation of slow antiprotons and positrons, Penning-Malmberg type traps were utilized. The spectrometer line was positioned downstream of the cusp trap. At the end of the beamline, an antihydrogen beam detector was located, which comprises an inorganic Bismuth Germanium Oxide (BGO) single-crystal scintillator housed in a vacuum duct and surrounding plastic scintillators. A significant fraction of antihydrogen atoms flowing out the cusp trap were detected.

  8. Quantum ballistic experiment on antihydrogen fall

    CERN Document Server

    Voronin, A Yu; Dufour, G; Reynaud, S

    2015-01-01

    We study an interferometric approach to measure gravitational mass of antihydrogen. The method consists of preparing a coherent superposition of antihydrogen quantum state localized near a material surface in the gravitational field of the Earth, and then observing the time distribution of annihilation events followed after the free fall of an initially prepared superposition from a given height to the detector plate. We show that a corresponding time distribution is related to the momentum distribution in the initial state that allows its precise measurement. This approach is combined with a method of production of a coherent superposition of gravitational states by inducing a resonant transition using oscillating gradient magnetic field. We estimate an accuracy of measuring the gravitational mass of antihydrogen atom which could be deduced from such a measurement.

  9. Why antihydrogen and antimatter are different

    CERN Document Server

    Zichichi, Antonino

    2009-01-01

    As Paul Dirac realized, the existence of antihydrogen does not in itself prove the existence of antimatter. A look through the history of the subject, and in particular the role played by the CPT theorem, shows that ultimately it came down to experiment to prove the existence of antimatter through the discovery of the antideuteron at CERN in 1965.

  10. Antihydrogen atoms may have been drifters

    CERN Multimedia

    Reich, Eugenie Samuel

    2003-01-01

    "It is a mystery of cosmic proportions: why is the universe filled with matter and not antimatter? Physicists hoping to find the answer have been left scratching their heads this week by an analysis which claims that some antihydrogen atoms created last year may not be normal antiatoms after all. Instead, they may sit on the blurry line between atoms and plasma" (1 page)

  11. Cold Antihydrogen for Precise Laser Spectroscopy

    CERN Multimedia

    Bachor, P T; Gabrielse, G S; Walz, J; Hessels, E A; Tan, J; Oelert, W; George, M C; Grzonka, D J; Kossick, M; Storry, C H; Sefzick, T

    2002-01-01

    %AD-2 %title\\\\ \\\\The Antihydrogen TRAP Collaboration (ATRAP) seeks to do precise laser spectroscopy of antihydrogen. Comparisons of antihydrogen and hydrogen atoms should provide the most stringent test of CPT invariance involving baryons and leptons. ATRAP is an expansion of the TRAP collaboration that developed the techniques to take CERN antiprotons from an energy of 6 MeV (momentum 100 MeV/c) all the way down to thermal equilibrium at 4 K for storage. This storage energy is lower than realized previously by more than ten orders of magnitude. The TRAP techniques include slowing, capturing, electron cooling and stacking of antiprotons. ATRAP and other collaborations will use antiprotons from the Antiproton Decelerator (AD). This new facility makes sense for such experiments because we showed that antiprotons can be accumulated in a trap at much lower expense than was required in the earlier CERN AC-AA-LEAR complex. In the closest approach yet to the production of cold antihydrogen, collaboration members wer...

  12. The dynamics of latifundia formation.

    Science.gov (United States)

    Chaves, Luis Fernando

    2013-01-01

    Land tenure inequity is a major social problem in developing nations worldwide. In societies, where land is a commodity, inequities in land tenure are associated with gaps in income distribution, poverty and biodiversity loss. A common pattern of land tenure inequities through the history of civilization has been the formation of latifundia [Zhuāngyuán in chinese], i.e., a pattern where land ownership is concentrated by a small fraction of the whole population. Here, we use simple Markov chain models to study the dynamics of latifundia formation in a heterogeneous landscape where land can transition between forest, agriculture and recovering land. We systematically study the likelihood of latifundia formation under the assumption of pre-capitalist trade, where trade is based on the average utility of land parcels belonging to each individual landowner during a discrete time step. By restricting land trade to that under recovery, we found the likelihood of latifundia formation to increase with the size of the system, i.e., the amount of land and individuals in the society. We found that an increase of the transition rate for land use changes, i.e., how quickly land use changes, promotes more equitable patterns of land ownership. Disease introduction in the system, which reduced land profitability for infected individual landowners, promoted the formation of latifundia, with an increased likelihood for latifundia formation when there were heterogeneities in the susceptibility to infection. Finally, our model suggests that land ownership reforms need to guarantee an equitative distribution of land among individuals in a society to avoid the formation of latifundia. PMID:24376597

  13. The dynamics of latifundia formation.

    Directory of Open Access Journals (Sweden)

    Luis Fernando Chaves

    Full Text Available Land tenure inequity is a major social problem in developing nations worldwide. In societies, where land is a commodity, inequities in land tenure are associated with gaps in income distribution, poverty and biodiversity loss. A common pattern of land tenure inequities through the history of civilization has been the formation of latifundia [Zhuāngyuán in chinese], i.e., a pattern where land ownership is concentrated by a small fraction of the whole population. Here, we use simple Markov chain models to study the dynamics of latifundia formation in a heterogeneous landscape where land can transition between forest, agriculture and recovering land. We systematically study the likelihood of latifundia formation under the assumption of pre-capitalist trade, where trade is based on the average utility of land parcels belonging to each individual landowner during a discrete time step. By restricting land trade to that under recovery, we found the likelihood of latifundia formation to increase with the size of the system, i.e., the amount of land and individuals in the society. We found that an increase of the transition rate for land use changes, i.e., how quickly land use changes, promotes more equitable patterns of land ownership. Disease introduction in the system, which reduced land profitability for infected individual landowners, promoted the formation of latifundia, with an increased likelihood for latifundia formation when there were heterogeneities in the susceptibility to infection. Finally, our model suggests that land ownership reforms need to guarantee an equitative distribution of land among individuals in a society to avoid the formation of latifundia.

  14. Particle Physics Aspects of Antihydrogen Studies with ALPHA at CERN

    CERN Document Server

    Fujiwara, M C; Bertsche, W; Bowe, P D; Bray, C C; Butler, E; Cesar, C L; Chapman, S; Charlton, M; Fajans, J; Funakoshi, R; Gill, D R; Hangst, J S; Hardy, W N; Hayano, R S; Hayden, M E; Humphries, A J; Hydomako, R; Jenkins, M J; Jørgensen, L V; Kurchaninov, L; Lai, W; Lambo, R; Madsen, N; Nolan, P; Olchanski, K; Olin, A; Povilus, A; Pusa, P; Robicheaux, F; Sarid, E; Seif El Nasr, S; Silveira, D M; Storey, J W; Thompson, R I; Van der Werf, D P; Wasilenko, L; Wurtele, J S; Yamazaki, Y

    2008-01-01

    We discuss aspects of antihydrogen studies, that relate to particle physics ideas and techniques, within the context of the ALPHA experiment at CERN's Antiproton Decelerator facility. We review the fundamental physics motivations for antihydrogen studies, and their potential physics reach. We argue that initial spectroscopy measurements, once antihydrogen is trapped, could provide competitive tests of CPT, possibly probing physics at the Planck Scale. We discuss some of the particle detection techniques used in ALPHA. Preliminary results from commissioning studies of a partial system of the ALPHA Si vertex detector are presented, the results of which highlight the power of annihilation vertex detection capability in antihydrogen studies.

  15. Modeling of Dynamic FRC Formation

    Science.gov (United States)

    Mok, Yung; Barnes, Dan; Dettrick, Sean

    2010-11-01

    We have developed a 2-D resistive MHD code, Lamy Ridge, to simulate the entire FRC formation process in Tri Alpha's C2 device, including initial formation, translation, merging and settling into equilibrium. Two FRC's can be created simultaneously, and then translated toward each other so that they merge into a single FRC. The code couples the external circuits around the formation tubes to the partially ionized plasma inside. Plasma and neutral gas are treated as two fluids. Dynamic and energetic equations, which take into account ionization and charge exchange, are solved in a time advance manner. The geometric shape of the vessel is specified by a set of inputs that defines the boundaries, which are handled by a cut-cell algorithm in the code. Multiple external circuits and field coils can be easily added, removed or relocated through individual inputs. The design of the code is modular and flexible so that it can be applied to future devices. The results of the code are in reasonable agreement with experimental measurements on the C2 device.

  16. Resonant quantum transitions in trapped antihydrogen atoms

    CERN Document Server

    Amole, C; Baquero-Ruiz, M; Bertsche, W; Bowe, P D; Butler, E; Capra, A; Cesar, C L; Charlton, M; Deller, A; Donnan, P H; Eriksson, S; Fajans, J; Friesen, T; Fujiwara, M C; Gill, D R; Gutierrez, A; Hangst, J S; Hardy, W N; Hayden, M E; Humphries, A J; Isaac, C A; Jonsell, S; Kurchaninov, L; Little, A; Madsen, N; McKenna, J T K; Menary, S; Napoli, S C; Nolan, P; Olchanski, K; Olin, A; Pusa, P; Rasmussen, C Ø; Robicheaux, F; Sarid, E; Shields, C R; Silveira, D M; Stracka, S; So, C; Thompson, R I; van der Werf, D P; Wurtele, J S

    2012-01-01

    The hydrogen atom is one of the most important and influential model systems in modern physics. Attempts to understand its spectrum are inextricably linked to the early history and development of quantum mechanics. The hydrogen atom’s stature lies in its simplicity and in the accuracy with which its spectrum can be measured1 and compared to theory. Today its spectrum remains a valuable tool for determining the values of fundamental constants and for challenging the limits of modern physics, including the validity of quantum electrodynamics and—by comparison with measurements on its antimatter counterpart, antihydrogen—the validity of CPT (charge conjugation, parity and time reversal) symmetry. Here we report spectroscopy of a pure antimatter atom, demonstrating resonant quantum transitions in antihydrogen. We have manipulated the internal spin state2, 3 of antihydrogen atoms so as to induce magnetic resonance transitions between hyperfine levels of the positronic ground state. We used resonant microwave...

  17. The effect of an anti-hydrogen bond on Fermi resonance:A Raman spectroscopic study of the Fermi doublet v1-v12 of liquid pyridine

    Institute of Scientific and Technical Information of China (English)

    Li Dong-Fei; Gao Shu-Qin; Sun Cheng-Lin; Li Zuo-Wei

    2012-01-01

    The effects of an anti-hydrogen bond on the v1-v12 Fermi resonance (FR) of pyridine are experimentally investigated by using Raman scattering spectroscopy.Three systems,pyridine/water,pyridine/formamide,and pyridine/carbon tetrachloride,provide varying degrees of strength for the diluent-pyridine anti-hydrogen bond complex.Water forms a stronger anti-hydrogen bond with pyridine than with formamide,and in the case of adding non-polar solvent carbon tetrachloride,which is neither a hydrogen bond donor nor an acceptor and incapable of forming a hydrogen bond with pyridine,the intermolecular distance of pyridine will increase and the interaction of pyridine molecules will reduce.The dilution studies are performed on the three systems.Comparing with the values of the Fermi coupling coefficient W of the ring breathing mode v1 and triangle mode v12 of pyridine at different volume concentrations,which are calculated according to the Bertran equations,in three systems,we find that the solution with the strongest anti-hydrogen bond,water,shows the fastest change in thev1-v12 Fermi coupling coefficient W with the volume concentration varying,followed by the formamide and carbon tetrachloride solutions.These results suggest that the stronger anti-hydrogen bond-forming effect will cause a greater reduction in the strength of the v1-v12 FR of pyridine.According to the mechanism of the formation of an anti-hydrogen bond in the complexes and the FR theory,a qualitative explanation for the anti-hydrogen bond effect in reducing the strength of the v1 - v12 FR of pyridine is given.

  18. Tests of CPT, Lorentz invariance and the WEP with antihydrogen

    Energy Technology Data Exchange (ETDEWEB)

    Holzscheiter, M.H.; ATHENA Collaboration

    1999-03-01

    Antihydrogen atoms, produced near rest, trapped in a magnetic well, and cooled to the lowest possible temperature (kinetic energy) could provide an extremely powerful tool for the search of violations of CPT and Lorentz invariance. Equally well, such a system could be used for searches of violations of the Weak Equivalence Principle (WEP) at high precision. The author describes his plans to form a significant number of cold, trapped antihydrogen atoms for comparative precision spectroscopy of hydrogen and antihydrogen and comment on possible first experiments.

  19. Extrasolar planets formation, detection and dynamics

    CERN Document Server

    Dvorak, Rudolf

    2008-01-01

    This latest, up-to-date resource for research on extrasolar planets covers formation, dynamics, atmospheres and detection. After a look at the formation of giant planets, the book goes on to discuss the formation and dynamics of planets in resonances, planets in double stars, atmospheres and habitable zones, detection via spectra and transits, and the history and prospects of ESPs as well as satellite projects.Edited by a renowned expert in solar system dynamics with chapters written by the leading experts in the method described -- from the US and Europe -- this is an ideal textbook for g

  20. CERN experiment provides first glimpse inside cold antihydrogen

    CERN Multimedia

    2002-01-01

    "The ATRAP experiment at the Antiproton Decelerator at CERN has detected and measured large numbers of cold antihydrogen atoms. Relying on ionization of the cold antiatoms when they pass through a strong electric field gradient, the ATRAP measurement provides the first glimpse inside an antiatom, and the first information about the physics of antihydrogen. The results have been accepted for publication in Physical Review Letters" (1 page).

  1. Dynamic formation control for autonomous underwater vehicles

    Institute of Scientific and Technical Information of China (English)

    燕雪峰; 古锋; 宋琛; 胡晓琳; 潘毅

    2014-01-01

    Path planning and formation structure forming are two of the most important problems for autonomous underwater vehicles (AUVs) to collaborate with each other. In this work, a dynamic formation model was proposed, in which several algorithms were developed for the complex underwater environment. Dimension changeable particle swarm algorithm was used to find an optimized path by dynamically adjusting the number and the distribution of the path nodes. Position relationship based obstacle avoidance algorithm was designed to detour along the edges of obstacles. Virtual potential point based formation-keeping algorithm was employed by incorporating dynamic strategies which were decided by the current states of the formation. The virtual potential point was used to keep the formation structure when the AUV or the formation was deviated. Simulation results show that an optimal path can be dynamically planned with fewer path nodes and smaller fitness, even with a concave obstacle. It has been also proven that different formation-keeping strategies can be adaptively selected and the formation can change its structure in a narrow area and restore back after passing the obstacle.

  2. Dynamics of sheet nacre formation in bivalves.

    Science.gov (United States)

    Rousseau, Marthe; Meibom, Anders; Gèze, Marc; Bourrat, Xavier; Angellier, Martine; Lopez, Evelyne

    2009-03-01

    Formation of nacre (mother-of-pearl) is a biomineralization process of fundamental scientific as well as industrial importance. However, the dynamics of the formation process is still not understood. Here, we use scanning electron microscopy and high spatial resolution ion microprobe depth-profiling to image the full three-dimensional distribution of organic materials around individual tablets in the top-most layer of forming nacre in bivalves. Nacre formation proceeds by lateral, symmetric growth of individual tablets mediated by a growth-ring rich in organics, in which aragonite crystallizes from amorphous precursors. The pivotal role in nacre formation played by the growth-ring structure documented in this study adds further complexity to a highly dynamical biomineralization process.

  3. Antihydrogen physics: gravitation and spectroscopy in AEgIS

    CERN Document Server

    Ferragut, R; Stroke, H H; Dassa, L; Rohne, O; Hogan, S D; Cialdi, S; Al-Qaradawi, I Y; Formaro, L; Sandaker, H; Testera, G; Stepanov, S V; Folegati, P; Morhard, C; Warring, U; Prelz, F; Belov, A S; Bonomi, G; Consolati, G; Ferrari, G; Lagomarsino, V; Krasnicky, D; Drobychev, G; Giammarchi, M G; Heyne, R; Zenoni, A; Castelli, F; Mariazzi, S; Cabaret, L; Fischer, A; Boscolo, I; Sillou, D; Villa, F; Perini, D; Djourelov, N; Zavatarelli, S; Oberthaler, M K; Manuzio, G; Carraro, C; Matveev, V A; Jorgensen, L V; Nedelec, P; Prevedelli, M; Comparat, D; Dupasquier, A; Turbabin, A V; Zvezhinskij, D S; Fontana, A; Kellerbauer, A; Canali, C; Dudarev, A; Petracek, V; Riccardi, C; Nebbia, G; Gninenko, S N; Brusa, R S; Rotondi, A; Sacerdoti, M; Calloni, A; Doser, M; Byakov, V M; Quasso, F; Trezzi, D

    2011-01-01

    AEgIS (Antimatter experiment: gravity, interferometry, spectroscopy) is an experiment approved by CERN with the goal of studying antihydrogen physics. In AEgIS, antihydrogen will be produced by charge exchange reactions of cold antiprotons with positronium atoms excited in a Rydberg state (n > 20). In the first phase of the experiment, controlled acceleration by an electric field gradient (Stark effect) and subsequent measurement of free fall in a Moire deflectometer will allow a test of the weak equivalence principle. In a second phase, the antihydrogen will be slowed, confined, and laser-cooled to perform CPT studies and detailed spectroscopy. In the present work, after a general description of the experiment, the present status of advancement will be reviewed, with special attention to the production and excitation of positronium atoms.

  4. Dynamic models of lateritic bauxite formation

    Science.gov (United States)

    Zhukov, V. V.; Bogatyrev, B. A.

    2012-09-01

    2D dynamic models of bauxite formation in the weathering mantle covering denudation areas drained by river systems are discussed. The role of relief-forming factors (tectonic uplift, river erosion and denudation of drainage divides), the interrelation of hydrogeological and lithologic structure of the bauxitebearing weathering mantle, and the dynamics of zoning formation above and below groundwater level are described in the models. Creative and destructive epochs of lateritic bauxite formation differing in tectonic regime are distinguished. During the creative epochs, lateritic weathering develops against a background of decreasing denudation and an increase in areas of bauxite formation. The destructive epochs are characterized by intense denudation, cutting down the areas of lateritic bauxite formation and eventually leading to the complete removal of the weathering mantle. Different morphogenetic types and varieties of bauxite-bearing weathering mantles develop during creative and destructive epochs. The morphology of the weathering mantle sections at the deposits of Cenozoic lateritic bauxite in the present-day tropical zone of the Earth corresponds to the destructive epoch, which is characterized by declining areas of lateritic bauxite formation and will end with complete denudation of lateritic bauxite.

  5. Quantum Reflection of Antihydrogen in the GBAR Experiment

    CERN Document Server

    Dufour, Gabriel; Lambrecht, Astrid; Nesvizhevsky, Valery; Reynaud, Serge; Voronin, Alexei

    2013-01-01

    In the GBAR experiment, cold antihydrogen atoms will be left to fall on an annihilation plate with the aim of measuring the gravitational acceleration of antimatter. Here, we study the quantum reflection of these antiatoms due to the Casimir-Polder potential above the plate. We give realistic estimates of the potential and quantum reflection amplitudes, taking into account the specificities of antihydrogen and the optical properties of the plate. We find that quantum reflection is enhanced for weaker potentials, for example above thin slabs, graphene and nanoporous media.

  6. The dynamics of group formation among leeches

    Directory of Open Access Journals (Sweden)

    Giacomo eBisson

    2012-05-01

    Full Text Available Leeches exploring a new environment continuously meet each other and merge in temporary groups. After 2-3 hours, leeches become attracted to each other eventually forming a large and stable group. When their number is reduced, leeches remain solitary, behaving independently. Group formation is facilitated by body injection of serotonin (5-HT and the level of endogenous 5-HT is elevated in leeches forming a large group. In contrast, intravenous injection of 5-HT antagonists prevented injected leeches from joining a large group of conspecifics. When sensilla near the head were ablated or the supraesophageal ganglion disconnected, leeches remained solitary, but explored the environment swimming and crawling. These results suggest that group formation is initiated by a release of 5-HT triggered by sensilla stimulation and its dynamics can be explained by the establishment of a reinforcement dynamics, as observed during human group formation. As 5-HT affects social interactions also in humans, group formation in leeches and humans share a similar dynamics and hormonal control.

  7. Habit Formation, Dynastic Altruism, and Population Dynamics

    OpenAIRE

    Schäfer, Andreas; Valente, Simone

    2007-01-01

    We study the general equilibrium properties of two growth models with overlapping generations, habit formation and endogenous fertility. In the neoclassical model, habits modify the economy's growth rate and generate transitional dynamics in fertility; station- ary income per capita is associated with either increasing or decreasing population and output, depending on the strength of habits. In the AK specification, growing population and increasing consumption per capita require that the hab...

  8. Quantitative dynamics of telomere bouquet formation.

    Directory of Open Access Journals (Sweden)

    David M Richards

    Full Text Available The mechanism by which homologous chromosomes pair during meiosis, as a prelude to recombination, has long been mysterious. At meiosis, the telomeres in many organisms attach to the nuclear envelope and move together to form the telomere bouquet, perhaps to facilitate the homologous search. It is believed that diffusion alone is not sufficient to account for the formation of the bouquet, and that some directed movement is also required. Here we consider the formation of the telomere bouquet in a wheat-rye hybrid both experimentally and using mathematical modelling. The large size of the wheat nucleus and wheat's commercial importance make chromosomal pairing in wheat a particularly interesting and important process, which may well shed light on pairing in other organisms. We show that, prior to bouquet formation, sister chromatid telomeres are always attached to a hemisphere of the nuclear membrane and tend to associate in pairs. We study a mutant lacking the Ph1 locus, a locus ensuring correct homologous chromosome pairing, and discover that bouquet formation is delayed in the wild type compared to the mutant. Further, we develop a mathematical model of bouquet formation involving diffusion and directed movement, where we show that directed movement alone is sufficient to explain bouquet formation dynamics.

  9. TIME-VARYING DYNAMICAL STAR FORMATION RATE

    International Nuclear Information System (INIS)

    We present numerical evidence of dynamic star formation in which the accreted stellar mass grows superlinearly with time, roughly as t 2. We perform simulations of star formation in self-gravitating hydrodynamic and magnetohydrodynamic turbulence that is continuously driven. By turning the self-gravity of the gas in the simulations on or off, we demonstrate that self-gravity is the dominant physical effect setting the mass accretion rate at early times before feedback effects take over, contrary to theories of turbulence-regulated star formation. We find that gravitational collapse steepens the density profile around stars, generating the power-law tail on what is otherwise a lognormal density probability distribution function. Furthermore, we find turbulent velocity profiles to flatten inside collapsing regions, altering the size-line width relation. This local flattening reflects enhancements of turbulent velocity on small scales, as verified by changes to the velocity power spectra. Our results indicate that gas self-gravity dynamically alters both density and velocity structures in clouds, giving rise to a time-varying star formation rate. We find that a substantial fraction of the gas that forms stars arrives via low-density flows, as opposed to accreting through high-density filaments

  10. An experimental limit on the charge of antihydrogen

    CERN Document Server

    Amole, C; Baquero-Ruiz, M; Bertsche, W; Butler, E; Capra, A; Cesar, C L; Charlton, M; Eriksson, S; Fajans, J; Friesen, T; Fujiwara, M C; Gill, D R; Gutierrez, A; Hangst, J S; Hardy, W N; Hayden, M E; Isaac, C A; Jonsell, S; Kurchaninov, L; Little, A; Madsen, N; McKenna, J T K; Menary, S; Napoli, S C; Nolan, P; Olchanski, K; Olin, A; Povilus, A; Pusa, P; Rasmussen, C Ø; Robicheaux, F; Sarid, E; Silveira, D M; So, C; Tharp, T D; Thompson, R I; Van der Werf, D P; Vendeiro, Z; Wurtele, J S; Zhmoginov, A I; Charman, A E

    2014-01-01

    The properties of antihydrogen are expected to be identical to those of hydrogen, and any differences would constitute a profound challenge to the fundamental theories of physics. The most commonly discussed antiatom-based tests of these theories are searches for antihydrogen-hydrogen spectral differences (tests of CPT (charge-parity-time) invariance) or gravitational differences (tests of the weak equivalence principle). Here we, the ALPHA Collaboration, report a different and somewhat unusual test of CPT and of quantum anomaly cancellation. A retrospective analysis of the influence of electric fields on antihydrogen atoms released from the ALPHA trap finds a mean axial deflection of 4.1±3.4 mm for an average axial electric field of 0.51 V mm−1. Combined with extensive numerical modelling, this measurement leads to a bound on the charge Qe of antihydrogen of Q=(−1.3±1.1±0.4) × 10−8. Here, e is the unit charge, and the errors are from statistics and systematic effects.

  11. Production of relativistic antihydrogen atoms by pair production with positron capture

    Science.gov (United States)

    Munger, Charles T.; Brodsky, Stanley J.; Schmidt, Ivan

    1994-04-01

    A beam of relativistic antihydrogen atoms, the bound state (p¯e+), can be created by circulating the beam of an antiproton storage ring through an internal gas target. An antiproton that passes through the Coulomb field of a nucleus of charge Z will create e+e- pairs, and antihydrogen will form when a positron is created in a bound rather than a continuum state about the antiproton. The cross section for this process is calculated to be ~4Z2 pb for antiproton momenta above 6 GeV/c. The gas target of Fermilab Accumulator experiment E760 has already produced ~34 unobserved antihydrogen atoms, and a sample of ~760 is expected in 1995 from the successive experiment E835. No other source of antihydrogen exists. A simple method for detecting relativistic antihydrogen is proposed and a method outlined of measuring the antihydrogen Lamb shift to ~1%.

  12. Dynamics of gradient formation by intracellular shuttling

    Energy Technology Data Exchange (ETDEWEB)

    Berezhkovskii, Alexander M. [Mathematical and Statistical Computing Laboratory, Division of Computational Bioscience, Center for Information Technology, National Institutes of Health, Bethesda, Maryland 20892 (United States); Shvartsman, Stanislav Y. [Department of Chemical and Biological Engineering and Lewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, New Jersey 08544 (United States)

    2015-08-21

    A number of important cellular functions rely on the formation of intracellular protein concentration gradients. Experimental studies discovered a number of mechanisms for the formation of such gradients. One of the mechanisms relies on the intracellular shuttling of a protein that interconverts between the two states with different diffusivities, under the action of two enzymes, one of which is localized to the plasma membrane, whereas the second is uniformly distributed in the cytoplasm. Recent work reported an analytical solution for the steady state gradient in this mechanism, obtained in the framework of a one-dimensional reaction-diffusion model. Here, we study the dynamics in this model and derive analytical expressions for the Laplace transforms of the time-dependent concentration profiles in terms of elementary transcendental functions. Inverting these transforms numerically, one can obtain time-dependent concentration profiles of the two forms of the protein.

  13. The dynamics of travertine terrace formation

    CERN Document Server

    Hammer, O; Jamtveit, B; Dysthe, Dag K.; Hammer, Oyvind; Jamtveit, Bjorn

    2006-01-01

    Travertine (limestone) terraces are common in caves, springs and rivers worldwide, and represent one of the most striking examples of geological pattern formation on the Earth's surface. The terraces form over a wide range of scales, from millimeters to tens of meters. Their origin has been poorly understood, but most likely involves a coupling between the precipitation rate and hydrodynamics. Microbial activity may also play a role. Here we present a minimal model based on shallow water flow and an empirical positive correlation between the flow velocity and precipitation rate. The resulting selforganizing pattern formation process displays rich and unusual dynamics, consistent with field observations. Terraces coarsen with time, fold into lobes and migrate downstream with differential rates, resulting in striking patterns. This model, in which topography grows rather than erodes in response to rapid flow, produces patterns that are completely different from those generated by flow driven erosion.

  14. Design of a Radial TPC for Antihydrogen Gravity Measurement with ALPHA-g

    CERN Document Server

    Capra, Andrea; Bishop, Daryl; Fujiwara, Makoto C; Freeman, Skyler; Gill, David; Grant, Matthew; Henderson, Robert; Kurchaninov, Leonid; Lu, Philip; Menary, Scott; Olchanski, Konstantin; Retiere, Fabrice

    2016-01-01

    The gravitational interaction of antimatter and matter has never been directly probed. ALPHA-g is a novel experiment that aims to perform the first measurement of the antihydrogen gravitational mass. A fundamental requirement for this new apparatus is a position sensitive particle detector around the antihydrogen trap which provides information about antihydrogen annihilation location. The proposed detector is a radial Time Projection Chamber, or \\textit{rTPC}, whose concept is being developed at TRIUMF. A simulation of the detector and the development of the reconstruction software, used to determine the antihydrogen annihilation point, is presented alongside with the expected performance of the rTPC.

  15. Pore Scale Dynamics of Microemulsion Formation.

    Science.gov (United States)

    Unsal, Evren; Broens, Marc; Armstrong, Ryan T

    2016-07-19

    Experiments in various porous media have shown that multiple parameters come into play when an oleic phase is displaced by an aqueous solution of surfactant. In general, the displacement efficiency is improved when the fluids become quasi-miscible. Understanding the phase behavior oil/water/surfactant systems is important because microemulsion has the ability to generate ultralow interfacial tension (microemulsion formation and the resulting properties under equilibrium conditions. However, the majority of applications where microemulsion is present also involve flow, which has received relatively less attention. It is commonly assumed that the characteristics of an oil/water/surfactant system under flowing conditions are identical to the one under equilibrium conditions. Here, we show that this is not necessarily the case. We studied the equilibrium phase behavior of a model system consisting of n-decane and an aqueous solution of olefin sulfonate surfactant, which has practical applications for enhanced oil recovery. The salt content of the aqueous solution was varied to provide a range of different microemulsion compositions and oil-water interfacial tensions. We then performed microfluidic flow experiments to study the dynamic in situ formation of microemulsion by coinjecting bulk fluids of n-decane and surfactant solution into a T-junction capillary geometry. A solvatochromatic fluorescent dye was used to obtain spatially resolved compositional information. In this way, we visualized the microemulsion formation and the flow of it along with the excess phases. A complex interaction between the flow patterns and the microemulsion properties was observed. The formation of microemulsion influenced the flow regimes, and the flow regimes affected the characteristics of the microemulsion formation. In particular, at low flow rates, slug flow was observed, which had profound consequences on the pore scale mixing behavior and resulting microemulsion properties. PMID

  16. Proposed antimatter gravity measurement with an antihydrogen beam

    CERN Document Server

    Kellerbauer, A G

    2008-01-01

    The principle of the equivalence of gravitational and inertial mass is one of the cornerstones of general relativity. Considerable efforts have been made and are still being made to verify its validity. A quantum-mechanical formulation of gravity allows for non-Newtonian contributions to the force which might lead to a difference in the gravitational force on matter and antimatter. While it is widely expected that the gravitational interaction of matter and of antimatter should be identical, this assertion has never been tested experimentally. With the production of large amounts of cold antihydrogen at the CERN Antiproton Decelerator, such a test with neutral antimatter atoms has now become feasible. For this purpose, we have proposed to set up the AEGIS experiment at CERN/AD, whose primary goal will be the direct measurement of the Earth’s gravitational acceleration on antihydrogen with a classical Moiré deflectometer.

  17. ALPHA experiment : limit on the charge of antihydrogen atom

    CERN Multimedia

    2016-01-01

    Antimatter continues to intrigue physicists due to its apparent absence in the observable universe. Current theory requires that matter and antimatter should have appeared in equal quantities after the Big Bang, but the Stan- dard Model offers no quantitative explanation for the apparent disappearance of half of the universe. It has recently become possible to study trapped atoms1–4 of antihydrogen to search for possible, as yet unobserved, differences in the physical behaviour of matter and antimatter.

  18. Emulsion detectors for the antihydrogen detection in AEgIS

    International Nuclear Information System (INIS)

    The AEgIS experiment at CERN aims to perform the first direct measurement of gravitational interaction between matter and antimatter by measuring the deviation of a cold antihydrogen beam in the Earth gravitational field. The design of the experiment has been recently updated to include emulsion films as position sensitive detector. The submicrometric position accuracy of emulsions leads indeed to a significant improvement of the experimental sensitivity. We present results of preliminary tests and discuss perspectives for the final measurement

  19. Emulsion detectors for the antihydrogen detection in AEgIS

    Energy Technology Data Exchange (ETDEWEB)

    Pistillo, C., E-mail: ciro.pistillo@cern.ch [University of Bern, Albert Einstein Center for Fundamental Physics, Laboratory for High Energy Physics (Switzerland); Aghion, S. [Politecnico of Milano (Italy); Amsler, C.; Ariga, A.; Ariga, T. [University of Bern, Albert Einstein Center for Fundamental Physics, Laboratory for High Energy Physics (Switzerland); Belov, A. [Institute for Nuclear Research of the Russian Academy of Science (Russian Federation); Bonomi, G. [University of Brescia, Department of Mechanical and Industrial Engineering (Italy); Bräunig, P. [Heidelberg University, Kirchhoff-Institute for Physics (Germany); Bremer, J. [CERN, Physics Department (Switzerland); Brusa, R. S. [University of Trento, Department of Physics (Italy); Cabaret, L. [University of Paris-Sud, Laboratory Aim Cotton, CNRS (France); Caccia, M. [INFN Milano (Italy); Caravita, R. [University of Genova, Department of Physics (Italy); Castelli, F. [INFN Milano (Italy); Cerchiari, G. [Max Planck Institute for Nuclear Physics (Germany); Chlouba, K. [Czech Technical University (Czech Republic); Cialdi, S. [INFN Milano (Italy); Comparat, D. [University of Paris-Sud, Laboratory Aim Cotton, CNRS (France); Consolati, G. [Politecnico of Milano (Italy); Demetrio, A. [Heidelberg University, Kirchhoff-Institute for Physics (Germany); and others

    2015-08-15

    The AEgIS experiment at CERN aims to perform the first direct measurement of gravitational interaction between matter and antimatter by measuring the deviation of a cold antihydrogen beam in the Earth gravitational field. The design of the experiment has been recently updated to include emulsion films as position sensitive detector. The submicrometric position accuracy of emulsions leads indeed to a significant improvement of the experimental sensitivity. We present results of preliminary tests and discuss perspectives for the final measurement.

  20. Event Normalization Through Dynamic Log Format Detection

    Institute of Scientific and Technical Information of China (English)

    Christoph Meinel

    2014-01-01

    The analytical and monitoring capabilities of central event re-positories, such as log servers and intrusion detection sys-tems, are limited by the amount of structured information ex-tracted from the events they receive. Diverse networks and ap-plications log their events in many different formats, and this makes it difficult to identify the type of logs being received by the central repository. The way events are logged by IT systems is problematic for developers of host-based intrusion-detection systems (specifically, host-based systems), develop-ers of security-information systems, and developers of event-management systems. These problems preclude the develop-ment of more accurate, intrusive security solutions that obtain results from data included in the logs being processed. We propose a new method for dynamically normalizing events into a unified super-event that is loosely based on the Common Event Expression standard developed by Mitre Corporation. We explain how our solution can normalize seemingly unrelat-ed events into a single, unified format.

  1. Experimental and computational study of the injection of antiprotons into a positron plasma for antihydrogen production

    DEFF Research Database (Denmark)

    Amole, C.; Ashkezari, M.D.; Baquero-Ruiz, M.;

    2013-01-01

    One of the goals of synthesizing and trapping antihydrogen is to study the validity of charge-parity-time symmetry through precision spectroscopy on the anti-atoms, but the trapping yield achieved in recent experiments must be significantly improved before this can be realized. Antihydrogen atoms...

  2. Production of antihydrogen at reduced magnetic field for anti-atom trapping

    CERN Document Server

    Andresen, G B; Boston, A; Bowe, P D; Cesar, C L; Chapman, S; Charlton, M; Chartier, M; Deutsch, A; Fajans, J; Fujiwara, M C; Funakoshi, R; Gill, D R; Gomberoff, K; Hangst, J S; Hayano, R S; Hydomako, R; Jenkins, M J; Jørgensen, L V; Kurchaninov, L; Madsen, N; Nolan, P; Olchanski, K; Olin, A; Page, R D; Povilus, A; Robicheaux, F; Sarid, E; Silveira, D M; Storey, J W; Thompson, R I; van der Werf, D P; Wurtele, J S; Yamazaki, Y

    2008-01-01

    We have demonstrated production of antihydrogen in a 1$,$T solenoidal magnetic field. This field strength is significantly smaller than that used in the first generation experiments ATHENA (3$,$T) and ATRAP (5$,$T). The motivation for using a smaller magnetic field is to facilitate trapping of antihydrogen atoms in a neutral atom trap surrounding the production region. We report the results of measurements with the ALPHA (Antihydrogen Laser PHysics Apparatus) device, which can capture and cool antiprotons at 3$,$T, and then mix the antiprotons with positrons at 1$,$T. We infer antihydrogen production from the time structure of antiproton annihilations during mixing, using mixing with heated positrons as the null experiment, as demonstrated in ATHENA. Implications for antihydrogen trapping are discussed.

  3. Antihydrogen Production in $ \\bar{p} $ Z - interaction

    CERN Multimedia

    2002-01-01

    % PS210 \\\\ \\\\ The production of the antihydrogen atom $ \\bar {H}^0 \\equiv \\bar{p}e $ as the simplest atomic bound state of antimatter has been studied. Nine $ \\bar {H}^0 $ have been observed.\\\\ \\\\ The production of $ \\bar {H}^0 $ is predominantly mediated by the two-photon mechanism in the antiproton-nucleus interaction. In principle $ \\bar {H}^0 $ is well suited for investigations of fundamental CPT violation studies under different forces, however, in the present experiment we concentrated on the production of this antimatter object, since so far it never had been observed.

  4. Boundedness of Formation Configuration for Nonlinear Three-body Dynamics

    Institute of Scientific and Technical Information of China (English)

    LI Peng; SONG Yongduan

    2011-01-01

    The configuration boundedness of the three-body model dynamics is studied for Sun-Earth formation flying missions. The three-body formation flying model is built up with considering the lunar gravitational acceleration and solar radiation pressure. Because traditional linearized dynamics based method has relatively lower accuracy, a modified nonlinear formation configuration analysis method is proposed in this paper. Comparative studies are carried out from three aspects, i.e., natural formation configuration with arbitrary departure time, initialization time and formation configuration boundedness, and specific initialization time for bounded formation configuration. Simulations demonstrate the differences between the two schemes,and indicate that the nonlinear dynamic method reduces the error caused by the model linearization and disturbance approximation, and thus provides higher accuracy for boundedness analysis, which is of value to initial parameters selection for natural three-body formation flying.

  5. Dynamics of lane formation in driven binary complex plasmas

    NARCIS (Netherlands)

    Sutterlin, K. R.; Wysocki, A.; Ivlev, A. V.; Rath, C.; Thomas, H. M.; Rubin-Zuzic, M.; W. J. Goedheer,; Fortov, V. E.; Lipaev, A. M.; Molotkov, V. I.; Petrov, O. F.; Morfill, G. E.; Lowen, H.

    2009-01-01

    The dynamical onset of lane formation is studied in experiments with binary complex plasmas under microgravity conditions. Small microparticles are driven and penetrate into a cloud of big particles, revealing a strong tendency towards lane formation. The observed time-resolved lane-formation proces

  6. Description and first application of a new technique to measure the gravitational mass of antihydrogen

    DEFF Research Database (Denmark)

    Amole, C.; Ashkezari, M.D.; Baquero-Ruiz, M.;

    2013-01-01

    no direct, free-fall style, experimental tests of gravity on antimatter. Here we describe a novel direct test methodology; we search for a propensity for antihydrogen atoms to fall downward when released from the ALPHA antihydrogen trap. In the absence of systematic errors, we can reject ratios...... of the gravitational to inertial mass of antihydrogen >75 at a statistical significance level of 5%; worst-case systematic errors increase the minimum rejection ratio to 110. A similar search places somewhat tighter bounds on a negative gravitational mass, that is, on antigravity. This methodology, coupled...

  7. Status Report: A Detector for Measuring the Ground State Hyperfine Splitting of Antihydrogen

    CERN Document Server

    Kolbinger, Bernadette

    2016-01-01

    The ASACUSA (Atomic Spectroscopy And Collisions Using Slow Antiprotons) collaboration at the Antiproton Decelerator at CERN aims to measure the ground state hyperfine structure of antihydrogen. A Rabi-like spectrometer line has been built for this purpose. A detector for counting antihydrogen is located at the end of the beam line. This contribution will focus on the tracking detector, whose challenging task it is to discriminate between background events and antiproton annihilations originating from antihydrogen atoms which are produced only in small amounts.

  8. In-beam measurement of the hydrogen hyperfine splitting - towards antihydrogen spectroscopy

    CERN Document Server

    Diermaier, M; Kolbinger, B; Malbrunot, C; Massiczek, O; Sauerzopf, C; Simon, M C; Zmeskal, J; Widmann, E

    2016-01-01

    Antihydrogen, the lightest atom consisting purely of antimatter, is an ideal laboratory to study the CPT symmetry by comparison to hydrogen. With respect to absolute precision, transitions within the ground-state hyperfine structure (GS-HFS) are most appealing by virtue of their small energy separation. ASACUSA proposed employing a beam of cold antihydrogen atoms in a Rabi-type experiment to determine the GS-HFS in a field-free region. Here we present a measurement of the zero-field hydrogen GS-HFS using the spectroscopy apparatus of ASACUSA's antihydrogen experiment. The measured value of $\

  9. Thermodynamics and dynamics of the formation of spherical lipidic vesicles

    CERN Document Server

    Zapata, E Hernandez; Santamaría-Holek, I

    2009-01-01

    We propose a free energy expression accounting for the formation of spherical vesicles from planar lipidic membranes and derive a Fokker-Planck equation for the probability distribution describing the dynamics of vesicle formation. We found that formation may occur as an activated process for small membranes and as a transport process for sufficiently large membranes. We give explicit expressions for the transition rates and the characteristic time of vesicle formation in terms of the relevant physical parameters.

  10. Electron plasmas as a diagnostic tool for hyperfine spectroscopy of antihydrogen

    Energy Technology Data Exchange (ETDEWEB)

    Friesen, T.; Thompson, R. I. [Department of Physics and Astronomy, University of Calgary, Calgary AB, T2N 1N4 (Canada); Amole, C.; Capra, A.; Menary, S. [Department of Physics and Astronomy, York University, Toronto ON, M3J 1P3 (Canada); Ashkezari, M. D.; Hayden, M. E. [Department of Physics, Simon Fraser University, Burnaby BC, V5A 1S6 (Canada); Baquero-Ruiz, M.; Fajans, J.; Little, A.; So, C.; Wurtele, J. S. [Department of Physics, University of California, Berkeley, CA 94720-7300 (United States); Bertsche, W. [School of Physics and Astronomy, University of Manchester, M13 9PL Manchester, UK and The Cockcroft Institute, WA4 4AD Warrington (United Kingdom); Bowe, P. D.; Hangst, J. S.; Rasmussen, C. O. [Department of Physics and Astronomy, Aarhus University, DK-8000 Aarhus C (Denmark); Butler, E. [Physics Department, CERN, CH-1211 Geneva 23 (Switzerland); Cesar, C. L.; Silveira, D. M. [Instituto de Fisica, Universidade Federal do Rio de Janeiro, Rio de Janeiro 21941-972 (Brazil); Charlton, M. [Department of Physics, College of Science, Swansea University, Swansea SA2 8PP (United Kingdom); and others

    2013-03-19

    Long term magnetic confinement of antihydrogen atoms has recently been demonstrated by the ALPHA collaboration at CERN, opening the door to a range of experimental possibilities. Of particular interest is a measurement of the antihydrogen spectrum. A precise comparison of the spectrum of antihydrogen with that of hydrogen would be an excellent test of CPT symmetry. One prime candidate for precision CPT tests is the ground-state hyperfine transition; measured in hydrogen to a precision of nearly one part in 10{sup 12}. Effective execution of such an experiment with trapped antihydrogen requires precise knowledge of the magnetic environment. Here we present a solution that uses an electron plasma confined in the antihydrogen trapping region. The cyclotron resonance of the electron plasma is probed with microwaves at the cyclotron frequency and the subsequent heating of the electron plasma is measured through the plasma quadrupole mode frequency. Using this method, the minimum magnetic field of the neutral trap can be determined to within 4 parts in 10{sup 4}. This technique was used extensively in the recent demonstration of resonant interaction with the hyperfine levels of trapped antihydrogen atoms.

  11. In-beam measurement of the hydrogen hypernine splitting - towards antihydrogen spectroscopy

    CERN Document Server

    Diermaier, Martin; The Asacusa AD-3 collaboration; Kolbinger, Bernadette; Malbrunot, Chloé; Massiczek, Oswald; Sauerzopf, Clemens; Simon, Martin Christian; Zmeskal, Johann; Widmann, Eberhard

    2016-01-01

    Antihydrogen, the lightest atom consisting purely of antimatter, is an ideal laboratory to study the CPT symmetry by comparison to hydrogen. With respect to absolute precision, transitions within the ground-state hyperfine structure (GS-HFS) are most appealing by virtue of their small energy separation. ASACUSA proposed employing a beam of cold antihydrogen atoms in a Rabi-type experiment to determine the GS-HFS in a field-free region. Here we present a measurement of the zero-field hydrogen GS-HFS using the spectroscopy apparatus of ASACUSA' s antihydrogen experiment. The measured value of nu_HF=1 420 405 748.4(3.4)(1.6) Hz with a relative precision of 2.7 × 10(−9) constitutes the most precise determination of this quantity in a beam and verifies the developed spectroscopy methods for the antihydrogen HFS experiment to the ppb level. Together with the recently presented observation of antihydrogen atoms 2.7 m downstream of the production region, the prerequisites for a measurement with antihydrogen are no...

  12. SOLITONS: Dynamics of strong coupling formation between laser solitons

    Science.gov (United States)

    Rosanov, Nikolai N.; Fedorov, S. V.; Shatsev, A. N.

    2005-03-01

    The dynamics of the strong coupling formation between two solitons with the unit topological charge is studied in detail for a wide-aperture class A laser. The sequence of bifurcations of the vector field of energy fluxes in the transverse plane was demonstrated during the formation of a soliton complex.

  13. Quasi-satellite dynamics in formation flight

    Science.gov (United States)

    Mikkola, Seppo; Prioroc, Claudiu-Lucian

    2016-04-01

    The quasi-satellite phenomenon makes two celestial bodies to fly near each other (Mikkola et al.) and that effect can be used also to make artificial satellites move in tandem. We consider formation flight of two or three satellites in low eccentricity near Earth orbits. With the help of weak ion thrusters, it is possible to accomplish tandem flight. With ion thrusters, it is also possible to mimic many kinds of mutual force laws between the satellites. We found that both a constant repulsive force or an attractive force that decreases with the distance are able to preserve the formation in which the eccentricities cause the actual relative motion and the weak thrusters keep the mean longitude difference small. Initial values are important for the formation flight but very exact adjustment of orbital elements is not important. Simplicity is one of our goals in this study and this result is achieved at least in the way that, when constant force thrusters are used, the satellites only need to detect the directions of the other ones to fly in tandem. A repulsive acceleration of the order of 10-6 times the Earth attraction, is enough to effectively eliminate the disruptive effects of all the perturbations at least for a time-scale of years.

  14. Quasi-satellite dynamics in formation flight

    CERN Document Server

    Mikkola, Seppo

    2016-01-01

    The quasi-satellite (QS) phenomenon makes two celestial bodies to fly near each other (Mikkola et al. 2006) and that effect can be used also to make artificial satellites move in tandem. We consider formation flight of two or three satellites in low eccentricity near Earth orbits. With the help of weak ion thrusters it is possible to accomplish tandem flight. With ion thrusters it is also possible to mimic many kinds of mutual force laws between the satellites. We found that both a constant repulsive force or an attractive force that decreases with the distance are able to preserve the formation in which the eccentricities cause the actual relative motion and the weak thrusters keep the mean longitude difference small. Initial values are important for the formation flight but very exact adjustment of orbital elements is not important. Simplicity is one of our goals in this study and this result is achieved at least in the way that, when constant force thrusters are used, the satellites only need to detect the...

  15. Formation of Prominences and Dynamics Before Eruption

    Science.gov (United States)

    Luna, Manuel

    2016-07-01

    Solar prominences have fascinated to astronomers since the first scientific observations of eclipses. Prominences are spectacular manifestations of both quiescent and eruptive solar activity. These are cool and dense structures suspended in the very hot solar corona. The continuous improvements in spatial and temporal resolution from both ground- and space-based instruments have revealed a rich structure and dynamics of prominences. Despite over one century of observations, the magnetic structure of a solar prominence, the origin of its mass, and their dynamics remain vigorously debated issues with profound implications for space weather. In this talk I will address the question of the origin of the cool mass of prominences by reviewing past and recent advances in theoretical modelling.

  16. Development and testing of a positron accumulator for antihydrogen production

    International Nuclear Information System (INIS)

    A positron accumulator based on a modified Penning-Malmberg trap has been constructed and undergone preliminary testing prior to being shipped to CERN in Geneva where it will be a part of an experiment to synthesize low-energy antihydrogen. It utilises nitrogen buffer gas to cool and trap a continuous beam of positrons emanating from a 22Na radioactive source. A solid neon moderator slows the positrons from the source down to epithermal energies of a few eV before being injected into the trap. It is estimated that around 108 positrons can be trapped and cooled to ambient temperature within 5 minutes in this scheme using a 10 mCi source

  17. Dynamics of precipitation pattern formation at geothermal hot springs.

    Science.gov (United States)

    Goldenfeld, Nigel; Chan, Pak Yuen; Veysey, John

    2006-06-30

    We formulate and model the dynamics of spatial patterns arising during the precipitation of calcium carbonate from a supersaturated shallow water flow. The model describes the formation of travertine deposits at geothermal hot springs and rimstone dams of calcite in caves. We find explicit solutions for travertine domes at low flow rates, identify the linear instabilities which generate dam and pond formation on sloped substrates, and present simulations of statistical landscape evolution. PMID:16907308

  18. Gas Price Formation, Structure and Dynamics

    International Nuclear Information System (INIS)

    Our study, focused on gas prices in importing economies, describes wholesale prices and retail prices, their evolution for the last one or two decades, the economic mechanisms of price formation. While an international market for oil has developed thanks to moderate storage and transportation charges, these costs are much higher in the case of natural gas, which involves that this energy is still traded inside continental markets. There are three regional gas markets around the world: North America (the United States, importing mainly from Canada and Mexico), Europe (importing mainly from Russia, Algeria and Norway) and Asia (Japan, Korea, Taiwan, China and India, importing mainly from Indonesia, Malaysia and Australia). A market for gas has also developed in South America, but it will not be covered by our paper. In Europe and the US, due to large domestic resources and strong grids, natural gas is purchased mostly through pipelines. In Northeast Asia, there is a lack of such infrastructures, so imported gas takes mainly the form of Liquefied Natural Gas (LNG), shipped on maritime tankers. Currently, the LNG market is divided into two zones: the Atlantic Basin (Europe and US) and the Pacific Basin (Asia and the Western Coast of America). For the past few years, the Middle East and Africa have tended to be crucial suppliers for both LNG zones. Gas price formation varies deeply between regional markets, depending on several structural factors (regulation, contracting practises, existence of a spot market, liquidity, share of imports). Empirically, the degree of market opening (which corresponds to the seniority in the liberalization process) seems to be the primary determinant of pricing patterns. North America has the most liberalized and well-performing natural gas industry in the world. Gas pricing is highly competitive and is based on supply/demand balances. Spot and futures markets are developed. The British gas sector is also deregulated and thus follows a

  19. An improved limit on the charge of antihydrogen from stochastic acceleration.

    Science.gov (United States)

    Ahmadi, M; Baquero-Ruiz, M; Bertsche, W; Butler, E; Capra, A; Carruth, C; Cesar, C L; Charlton, M; Charman, A E; Eriksson, S; Evans, L T; Evetts, N; Fajans, J; Friesen, T; Fujiwara, M C; Gill, D R; Gutierrez, A; Hangst, J S; Hardy, W N; Hayden, M E; Isaac, C A; Ishida, A; Jones, S A; Jonsell, S; Kurchaninov, L; Madsen, N; Maxwell, D; McKenna, J T K; Menary, S; Michan, J M; Momose, T; Munich, J J; Nolan, P; Olchanski, K; Olin, A; Povilus, A; Pusa, P; Rasmussen, C Ø; Robicheaux, F; Sacramento, R L; Sameed, M; Sarid, E; Silveira, D M; So, C; Tharp, T D; Thompson, R I; van der Werf, D P; Wurtele, J S; Zhmoginov, A I

    2016-01-21

    Antimatter continues to intrigue physicists because of its apparent absence in the observable Universe. Current theory requires that matter and antimatter appeared in equal quantities after the Big Bang, but the Standard Model of particle physics offers no quantitative explanation for the apparent disappearance of half the Universe. It has recently become possible to study trapped atoms of antihydrogen to search for possible, as yet unobserved, differences in the physical behaviour of matter and antimatter. Here we consider the charge neutrality of the antihydrogen atom. By applying stochastic acceleration to trapped antihydrogen atoms, we determine an experimental bound on the antihydrogen charge, Qe, of |Q| quantum anomaly cancellation demand that the charge of antihydrogen be similarly small. Thus, our measurement constitutes an improved limit and a test of fundamental aspects of the Standard Model. If we assume charge superposition and use the best measured value of the antiproton charge, then we can place a new limit on the positron charge anomaly (the relative difference between the positron and elementary charge) of about one part per billion (one standard deviation), a 25-fold reduction compared to the current best measurement. PMID:26791725

  20. Nanoparticles dynamics on a surface: fractal pattern formation and fragmentation

    DEFF Research Database (Denmark)

    Dick, Veronika V.; Solov'yov, Ilia; Solov'yov, Andrey V.

    2010-01-01

    In this paper we review our recent results on the formation and the post-growth relaxation processes of nanofractals on surface. For this study we developed a method which describes the internal dynamics of particles in a fractal and accounts for their diffusion and detachment. We demonstrate tha...

  1. Complexity of gold nanoparticle formation disclosed by dynamics study

    DEFF Research Database (Denmark)

    Engelbrekt, Christian; Jensen, Palle Skovhus; Sørensen, Karsten;

    2013-01-01

    Although chemically synthesized gold nanoparticles (AuNPs) from gold salt (HAuCl4) are among the most studied nanomaterials, understanding the formation mechanisms is a challenge mainly due to limited dynamics information. A range of in situ methods with down to millisecond (ms) time resolution h...

  2. Dynamical Formation of Cataclysmic Variables in Globular Clusters

    CERN Document Server

    Hong, Jongsuk; Belloni, Diogo; Giersz, Mirek

    2016-01-01

    The formation and evolution of X-ray sources in globular clusters is likely to be affected by the cluster internal dynamics and the stellar interactions in the cluster dense environment.Several observational studies have revealed a correlation between the number of X-ray sources and the stellar encounter rate and provided evidence of the role of dynamics in the formation of X-ray binaries. We have performed a survey of Monte-Carlo simulations aimed at exploring the connection between the dynamics and formation of cataclysmic variables (CVs) and the origin of the observed correlation between the number of these objects, $N_{\\rm cv}$, and the stellar encounter rate, $\\Gamma$.The results of our simulations show a correlation between $N_{\\rm cv}$ and $\\Gamma$ as found in observational data, illustrate the essential role played by dynamics, and shed light on the dynamical history behind this correlation. CVs in our simulations are more centrally concentrated than single stars with masses close to those of turn-off...

  3. Molecular Dynamics Simulation of Amyloid Beta Dimer Formation

    CERN Document Server

    Urbanc, B; Ding, F; Sammond, D; Khare, S; Buldyrev, S V; Stanley, H E; Dokholyan, N V

    2004-01-01

    Recent experiments with amyloid-beta (Abeta) peptide suggest that formation of toxic oligomers may be an important contribution to the onset of Alzheimer's disease. The toxicity of Abeta oligomers depends on their structure, which is governed by assembly dynamics. Due to limitations of current experimental techniques, a detailed knowledge of oligomer structure at the atomic level is missing. We introduce a molecular dynamics approach to study Abeta dimer formation: (1) we use discrete molecular dynamics simulations of a coarse-grained model to identify a variety of dimer conformations, and (2) we employ all-atom molecular mechanics simulations to estimate the thermodynamic stability of all dimer conformations. Our simulations of a coarse-grained Abeta peptide model predicts ten different planar beta-strand dimer conformations. We then estimate the free energies of all dimer conformations in all-atom molecular mechanics simulations with explicit water. We compare the free energies of Abeta(1-42) and Abeta(1-40...

  4. Description and first application of a new technique to measure the gravitational mass of antihydrogen

    CERN Document Server

    Charman, A E; Menary, S; Capra, A; Baquero-Ruiz, M; Fajans, J; Ashkezari, M D; Bertsche, W; Butler, E; Cesar, C L; Charlton, M; Eriksson, S; Friesen, T; Fujiwara, M C; Gill, D R; Gutierrez, A; Hangst, J S; Hardy, W N; Hayden, M E; Isaac, C A; Jonsell, S; Kurchaninov, L; Little, A; Madsen, N; McKenna, J T K; Napoli, S C; Nolan, P; Olin, A; Pusa, P; Rasmussen, C Ø; Robicheaux, F; Sarid, E; Silveira, D M; So, C; Thompson, R I; Van der Werf, D P; Wurtele, J S; Zhmoginov, A I

    2013-01-01

    Physicists have long wondered whether the gravitational interactions between matter and antimatter might be different from those between matter and itself. Although there are many indirect indications that no such differences exist and that the weak equivalence principle holds, there have been no direct, free-fall style, experimental tests of gravity on antimatter. Here we describe a novel direct test methodology; we search for a propensity for antihydrogen atoms to fall downward when released from the ALPHA antihydrogen trap. In the absence of systematic errors, we can reject ratios of the gravitational to inertial mass of antihydrogen >75 at a statistical significance level of 5%; worst-case systematic errors increase the minimum rejection ratio to 110. A similar search places somewhat tighter bounds on a negative gravitational mass, that is, on antigravity. This methodology, coupled with ongoing experimental improvements, should allow us to bound the ratio within the more interesting near equivalence regim...

  5. Why We Already Know that Antihydrogen is Almost Certainly NOT Going to Fall "Up"

    CERN Document Server

    Menary, Scott

    2012-01-01

    The ALPHA collaboration (of which I am a member) has made great strides recently in trapping antihydrogen and starting down the path of making spectroscopic measurements. The primary goal of the experiment is to test CPT invariance but there is also interest in testing another fundamental issue -- the gravitational interaction between matter and antimatter (the so-called question of "antigravity"). As well as the other antihydrogen trapping experiments -- ASACUSA and ATRAP -- there is also a new experiment in the Antiproton Decelerator hall at CERN called AEGIS which is dedicated to testing the gravitional interaction between antihydrogen and the Earth. It has been claimed in the literature that there "is no compelling evidence or theoretical reason to rule out such a difference (i.e., between $g$ and $\\bar{g}$) at the 1% level." I argue in this short paper that bending of light by the sun provides a more stringent limit than this.

  6. Experimental limit on the ratio of the gravitational mass to the inertial mass of antihydrogen

    Science.gov (United States)

    Fajans, Joel; Wurtele, Jonathan; Charman, Andrew; Zhmoginov, Andrey

    2012-10-01

    Physicists have long wondered if the gravitational interactions between matter and antimatter might be different from those between matter and itself. While there are many indirect indications that no such differences exist, i.e., that the weak equivalence principle holds, there have been no direct, free-fall style, experimental tests of gravity on antimatter. By searching for a propensity for antihydrogen atoms to fall downward when released from the ALPHA antihydrogen trap, we have determined that we can reject ratios of the gravitational mass to the inertial mass of antihydrogen greater than about 100 at a statistical significance level of 5%. A similar search places somewhat lower limits on a negative gravitational mass, i.e., on antigravity.

  7. Description and first application of a new technique to measure the gravitational mass of antihydrogen

    Science.gov (United States)

    Alpha Collaboration; Amole, C.; Ashkezari, M. D.; Baquero-Ruiz, M.; Bertsche, W.; Butler, E.; Capra, A.; Cesar, C. L.; Charlton, M.; Eriksson, S.; Fajans, J.; Friesen, T.; Fujiwara, M. C.; Gill, D. R.; Gutierrez, A.; Hangst, J. S.; Hardy, W. N.; Hayden, M. E.; Isaac, C. A.; Jonsell, S.; Kurchaninov, L.; Little, A.; Madsen, N.; McKenna, J. T. K.; Menary, S.; Napoli, S. C.; Nolan, P.; Olin, A.; Pusa, P.; Rasmussen, C. Ø.; Robicheaux, F.; Sarid, E.; Silveira, D. M.; So, C.; Thompson, R. I.; van der Werf, D. P.; Wurtele, J. S.; Zhmoginov, A. I.; Charman, A. E.

    2013-04-01

    Physicists have long wondered whether the gravitational interactions between matter and antimatter might be different from those between matter and itself. Although there are many indirect indications that no such differences exist and that the weak equivalence principle holds, there have been no direct, free-fall style, experimental tests of gravity on antimatter. Here we describe a novel direct test methodology; we search for a propensity for antihydrogen atoms to fall downward when released from the ALPHA antihydrogen trap. In the absence of systematic errors, we can reject ratios of the gravitational to inertial mass of antihydrogen >75 at a statistical significance level of 5% worst-case systematic errors increase the minimum rejection ratio to 110. A similar search places somewhat tighter bounds on a negative gravitational mass, that is, on antigravity. This methodology, coupled with ongoing experimental improvements, should allow us to bound the ratio within the more interesting near equivalence regime.

  8. Discriminating between antihydrogen and mirror-trapped antiprotons in a minimum-B trap

    CERN Document Server

    Amole, C; Ashkezari, M D; Baquero-Ruiz, M; Bertsche, W; Butler, E; Cesar, C L; Chapman, S; Charlton, M; Deller, A; Eriksson, S; Fajans, J; Friesen, T; Fujiwara, M C; Gill, D R; Gutierrez, A; Hangst, J S; Hardy, W N; Hayden, M E; Humphries, A J; Hydomako, R; Kurchaninov, L; Jonsell, S; Madsen, N; Menary, S; Nolan, P; Olchanski, K; Olin, A; Povilus, A; Pusa, P; Robicheaux, F; Sarid, E; Silveira, D M; So, C; Storey, J W; Thompson, R I; van der Werf, D P; Wurtele, J S

    2012-01-01

    Recently, antihydrogen atoms were trapped at CERN in a magnetic minimum (minimum-B) trap formed by superconducting octupole and mirror magnet coils. The trapped antiatoms were detected by rapidly turning off these magnets, thereby eliminating the magnetic minimum and releasing any antiatoms contained in the trap. Once released, these antiatoms quickly hit the trap wall, whereupon the positrons and antiprotons in the antiatoms annihilated. The antiproton annihilations produce easily detected signals; we used these signals to prove that we trapped antihydrogen. However, our technique could be confounded by mirror-trapped antiprotons, which would produce seemingly-identical annihilation signals upon hitting the trap wall. In this paper, we discuss possible sources of mirror-trapped antiprotons and show that antihydrogen and antiprotons can be readily distinguished, often with the aid of applied electric fields, by analyzing the annihilation locations and times. We further discuss the general properties of antipr...

  9. An improved limit on the charge of antihydrogen from stochastic acceleration

    Science.gov (United States)

    Ahmadi, M.; Baquero-Ruiz, M.; Bertsche, W.; Butler, E.; Capra, A.; Carruth, C.; Cesar, C. L.; Charlton, M.; Charman, A. E.; Eriksson, S.; Evans, L. T.; Evetts, N.; Fajans, J.; Friesen, T.; Fujiwara, M. C.; Gill, D. R.; Gutierrez, A.; Hangst, J. S.; Hardy, W. N.; Hayden, M. E.; Isaac, C. A.; Ishida, A.; Jones, S. A.; Jonsell, S.; Kurchaninov, L.; Madsen, N.; Maxwell, D.; McKenna, J. T. K.; Menary, S.; Michan, J. M.; Momose, T.; Munich, J. J.; Nolan, P.; Olchanski, K.; Olin, A.; Povilus, A.; Pusa, P.; Rasmussen, C. Ø.; Robicheaux, F.; Sacramento, R. L.; Sameed, M.; Sarid, E.; Silveira, D. M.; So, C.; Tharp, T. D.; Thompson, R. I.; van der Werf, D. P.; Wurtele, J. S.; Zhmoginov, A. I.

    2016-01-01

    Antimatter continues to intrigue physicists because of its apparent absence in the observable Universe. Current theory requires that matter and antimatter appeared in equal quantities after the Big Bang, but the Standard Model of particle physics offers no quantitative explanation for the apparent disappearance of half the Universe. It has recently become possible to study trapped atoms- of antihydrogen to search for possible, as yet unobserved, differences in the physical behaviour of matter and antimatter. Here we consider the charge neutrality of the antihydrogen atom. By applying stochastic acceleration to trapped antihydrogen atoms, we determine an experimental bound on the antihydrogen charge, Qe, of |Q| < 0.71 parts per billion (one standard deviation), in which e is the elementary charge. This bound is a factor of 20 less than that determined from the best previous measurement of the antihydrogen charge. The electrical charge of atoms and molecules of normal matter is known to be no greater than about 10-21e for a diverse range of species including H2, He and SF6. Charge-parity-time symmetry and quantum anomaly cancellation demand that the charge of antihydrogen be similarly small. Thus, our measurement constitutes an improved limit and a test of fundamental aspects of the Standard Model. If we assume charge superposition and use the best measured value of the antiproton charge, then we can place a new limit on the positron charge anomaly (the relative difference between the positron and elementary charge) of about one part per billion (one standard deviation), a 25-fold reduction compared to the current best measurement.

  10. On mirror symmetry, CSB and antihydrogen symmetry in natural atom H

    CERN Document Server

    Van Hooydonk, G

    2002-01-01

    Molecular band spectra reveal a left-right symmetry for atoms (Van Hooydonk, Spectrochim. Acta A, 2000, 56, 2273). Intra-atomic left-right symmetry points to anti-atom states and, to make sense, this must also show in line spectra. H Lyman ns1/2 singlets show a mirror plane at quantum number n0=pi/2. Symmetry breaking oscillator (1-0.5pi/n)exp2 means that some of these n-states are anti-hydrogenic. This view runs ahead of CERN's AD-project on antihydrogen.

  11. Mexican hat curve for hydrogen and antihydrogen-states in natural atom H

    CERN Document Server

    Van Hooydonk, G

    2004-01-01

    Molecular band spectra as well as atomic line spectra reveal a left-right symmetry for atoms (Van Hooydonk, Spectrochim. Acta A, 2000, 56, 2273 and CERN-Ext-2002-041). We now extract a Mexican hat shaped or double well curve from the line spectrum (Lyman ns1/2 singlets) of natural atom H. An H CSB theory and its oscillator contribution (1-0.5pi/n)esp2/nexp2 lead to unprecedented results for antihydrogen physics, ahead of the CERN AD-project on artificial antihydrogen.

  12. Formation and post-formation dynamics of bacterial biofilm streamers as highly viscous liquid jets

    CERN Document Server

    Das, Siddhartha

    2013-01-01

    It has been recently reported that in presence of low Reynolds number (Re<<1) transport, preformed bacterial biofilms, several hours after their formation, may degenerate in form of filamentous structures, known as streamers. In this letter, we explain that such streamers form as the highly viscous liquid states of the intrinsically viscoelastic biofilms. Such "viscous liquid" state can be hypothesized by noting that the time of appearance of the streamers is substantially larger than the viscoelastic relaxation time scale of the biofilms, and this appearance is explained by the inability of a viscous liquid to withstand an external shear. Further, by identifying the post formation dynamics of the streamers as that of a viscous liquid jet in a surrounding flow field, we can interpret several unexplained issues associated with the post-formation dynamics of streamers, such as the clogging of the flow passage or the exponential time growth of streamer dimensions.

  13. Ice Formation on Kaolinite: Insights from Molecular Dynamics Simulations

    CERN Document Server

    Sosso, Gabriele C; Zen, Andrea; Pedevilla, Philipp; Michaelides, Angelos

    2016-01-01

    The formation of ice affects many aspects of our everyday life as well as technologies such as cryotherapy and cryopreservation. Foreign substances almost always aid water freezing through heterogeneous ice nucleation, but the molecular details of this process remain largely unknown. In fact, insight into the microscopic mechanism of ice formation on different substrates is difficult to obtain even via state-of-the-art experimental techniques. At the same time, atomistic simulations of heterogeneous ice nucleation frequently face extraordinary challenges due to the complexity of the water-substrate interaction and the long timescales that characterize nucleation events. Here, we have investigated several aspects of molecular dynamics simulations of heterogeneous ice nucleation considering as a prototypical ice nucleating material the clay mineral kaolinite, which is of relevance in atmospheric science. We show via seeded molecular dynamics simulations that ice nucleation on the hydroxylated (001) face of kaol...

  14. Dynamic Trap Formation and Elimination in Colloidal Quantum Dots

    KAUST Repository

    Voznyy, O.

    2013-03-21

    Using first-principles simulations on PbS and CdSe colloidal quantum dots, we find that surface defects form in response to electronic doping and charging of the nanoparticles. We show that electronic trap states in nanocrystals are dynamic entities, in contrast with the conventional picture wherein traps are viewed as stable electronic states that can be filled or emptied, but not created or destroyed. These traps arise from the formation or breaking of atomic dimers at the nanoparticle surface. The dimers\\' energy levels can reside within the bandgap, in which case a trap is formed. Fortunately, we are also able to identify a number of shallow-electron-affinity cations that stabilize the surface, working to counter dynamic trap formation and allowing for trap-free doping. © 2013 American Chemical Society.

  15. On a New Mechanism of Pattern Formation in Population Dynamics

    OpenAIRE

    Génieys, Stéphane; Volpert, Vitaly; Auger, Pierre

    2005-01-01

    We study a reaction-diffusion equation with an integral term describing nonlocal consumption of resources. We show that a homogeneous equilibrium can lose its stability resulting in appearance of stationary spatial structures. It is a new mechanism of pattern formation in population dynamics that can explain emergence of biological species due to intra-specific competition and random mutations.Travelling waves connecting an unstable homogeneous equilibrium and a periodic in space stationary s...

  16. Temperature-independent carrier formation dynamics in bulk heterojunction

    Science.gov (United States)

    Yonezawa, Kouhei; Yasuda, Takeshi; Moritomo, Yutaka

    2015-11-01

    We investigated the effects of temperature on the carrier formation dynamics in a small-molecular blend film, 2,5-di-(2-ethylhexyl)-3,6-bis-(5‧‧-n-hexy-[2,2‧,5‧,2‧‧]terthiophen-5-yl)-pyrrolo[3,4-c]pyrrolo-1,4-dione (SMDPPEH)/[6,6]-phenyl C71-butyric acid methyl ester (PC71BM). We spectroscopically determined the absolute numbers of donor (n\\text{D*}) and acceptor (n\\text{A*}) excitons per absorbed photon as functions of the delay time (t), in addition to the relative number of donor carries (n\\text{D+}). We found that the carrier formation dynamics is independent of temperature at 300 and 80 K: the carrier formation time (τrise = 0.4 ps) is much faster than the decay time (τdecay ≈ 2.5 ps) of donor excitons. The temperature independence strongly suggests that only excitons created near the donor-acceptor interface contribute to the carrier formation.

  17. Progress Toward a Format Standard for Flight Dynamics Models

    Science.gov (United States)

    Jackson, E. Bruce; Hildreth, Bruce L.

    2006-01-01

    In the beginning, there was FORTRAN, and it was... not so good. But it was universal, and all flight simulator equations of motion were coded with it. Then came ACSL, C, Ada, C++, C#, Java, FORTRAN-90, Matlab/Simulink, and a number of other programming languages. Since the halcyon punch card days of 1968, models of aircraft flight dynamics have proliferated in training devices, desktop engineering and development computers, and control design textbooks. With the rise of industry teaming and increased reliance on simulation for procurement decisions, aircraft and missile simulation models are created, updated, and exchanged with increasing frequency. However, there is no real lingua franca to facilitate the exchange of models from one simulation user to another. The current state-of-the-art is such that several staff-months if not staff-years are required to 'rehost' each release of a flight dynamics model from one simulation environment to another one. If a standard data package or exchange format were to be universally adopted, the cost and time of sharing and updating aerodynamics, control laws, mass and inertia, and other flight dynamic components of the equations of motion of an aircraft or spacecraft simulation could be drastically reduced. A 2002 paper estimated over $ 6 million in savings could be realized for one military aircraft type alone. This paper describes the efforts of the American Institute of Aeronautics and Astronautics (AIAA) to develop a standard flight dynamic model exchange standard based on XML and HDF-5 data formats.

  18. Dynamical surface gravity in spherically symmetric black hole formation

    International Nuclear Information System (INIS)

    We study dynamical surface gravity in a general spherically symmetric setting using Painleve-Gullstrand coordinates. Our analysis includes several definitions that have been proposed in the past as well as two new definitions adapted to Painleve-Gullstrand coordinates. Various properties are considered, including general covariance, value at extremality, locality and static limit. We illustrate with specific examples of 'dirty' black holes that even for spacetimes possessing a global timelike Killing vector, local definitions of surface gravity can differ substantially from 'nonlocal' ones that require an asymptotic normalization condition. Finally, we present numerical calculations of dynamical surface gravity for black hole formation via spherically symmetric scalar field collapse. Our results highlight the differences between the various definitions in a dynamical setting and provide further insight into the distinction between local and nonlocal definitions of surface gravity.

  19. The formation and dynamical evolution of young star clusters

    CERN Document Server

    Fujii, Michiko

    2015-01-01

    Recent observations have revealed a variety of young star clusters, including embedded systems, young massive clusters, and associations. We study the formation and dynamical evolution of these clusters using a combination of simulations and theoretical models. Our simulations start with a turbulent molecular cloud that collapses under its own gravity. The stars are assumed to form in the densest regions in the collapsing cloud after an initial free-fall times of the molecular cloud. The dynamical evolution of these stellar distributions are continued by means of direct $N$-body simulations. The molecular clouds typical for the Milky Way Galaxy tend to form embedded clusters which evolve to resemble open clusters. The associations were initially considerably more clumpy, but lost their irregularity in about a dynamical time scale due to the relaxation process. The densest molecular clouds, which are absent in the Milky Way but are typical in starburst galaxies, form massive young star clusters. They indeed ar...

  20. Dynamics and pattern formation in a cancer network with diffusion

    Science.gov (United States)

    Zheng, Qianqian; Shen, Jianwei

    2015-10-01

    Diffusion is ubiquitous inside cells, and it is capable of inducing spontaneous pattern formation in reaction-diffusion systems on a spatially homogeneous domain. In this paper, we investigate the dynamics of a diffusive cancer network regulated by microRNA and obtain the condition that the network undergoes a Hopf bifurcation and a Turing pattern bifurcation. In addition, we also develop the amplitude equation of the network model by using Taylor series expansion, multi-scaling and further expansion in powers of a small parameter. As a result of these analyses, we obtain the explicit condition on how the dynamics of the diffusive cancer network evolve. These results reveal that this system has rich dynamics, such as spotted stripe and hexagon patterns. The bifurcation diagram helps us understand the biological mechanism in the cancer network. Finally, numerical simulations confirm our analytical results.

  1. Antihydrogen and mirror-trapped antiproton discrimination: Discriminating between antihydrogen and mirror-trapped antiprotons in a minimum-B trap

    OpenAIRE

    Amole, C.; Andresen, G. B.; Ashkezari, M. D.; Baquero-Ruiz, M.; Bertsche, W.; Butler, E.; Cesar, C. L.; S. Chapman; Charlton, M.; Deller, A.; Eriksson, S.; Fajans, J.; Friesen, T.; Fujiwara, M. C.; Gill, D. R.

    2012-01-01

    Recently, antihydrogen atoms were trapped at CERN in a magnetic minimum (minimum-B) trap formed by superconducting octupole and mirror magnet coils. The trapped antiatoms were detected by rapidly turning off these magnets, thereby eliminating the magnetic minimum and releasing any antiatoms contained in the trap. Once released, these antiatoms quickly hit the trap wall, whereupon the positrons and antiprotons in the antiatoms annihilated. The antiproton annihilations produce easily detected s...

  2. Towards Measuring the Ground State Hyperfine Splitting of Antihydrogen -- A Progress Report

    CERN Document Server

    Sauerzopf, C; Dupré, P.; Higashi, Y.; Kaga, C.; Kolbinger, B.; Leali, M.; Lehner, S.; Rizzini, E.Lodi; Malbrunot, C.; Mascagna, V.; Massiczek, O.; Murtagh, D.J.; Nagata, Y.; Radics, B.; Simon, M.C.; Suzuki, K.; Tajima, M.; Ulmer, S.; Vamosi, S.; van Gorp, S.; Zmeskal, J.; Breuker, H.; Higaki, H.; Kanai, Y.; Kuroda, N.; Matsuda, Y.; Venturelli, L.; Widmann, E.; Yamazaki, Y.

    2016-01-01

    We report the successful commissioning and testing of a dedicated field-ioniser chamber for measuring principal quantum number distributions in antihydrogen as part of the ASACUSA hyperfine spectroscopy apparatus. The new chamber is combined with a beam normalisation detector that consists of plastic scintillators and a retractable passivated implanted planar silicon (PIPS) detector.

  3. First step in the process of calculating the cross section for muonic antihydrogen

    CERN Document Server

    Maher, Niamh

    2016-01-01

    The end goal of the project is to measure the charge radius of the antiproton with muons. However a necessary step first is to calculate cross section of Muonium and antiprotons in the production of antihydrogen to determine the feasibility of such an experiment.

  4. Properties of Antiprotons and Antihydrogen, and the Study of Exotic Atoms

    CERN Document Server

    Doser, Michael

    2015-01-01

    The study of exotic atoms, of antiprotons and of antihydrogen atoms provides many windows into the investigation of fundamental symmetries, of interactions between particles and nuclei, of nuclear physics and of atomic physics. This field appeared at CERN simultaneously with the first accelerators, and has advanced over the decades in parallel with improvements and advances in its infrastructure.

  5. Geneva University: On our way to anti-hydrogen at rest

    CERN Multimedia

    Geneva University

    2010-01-01

    Ecole de physique Département de physique nucléaire et corspusculaire 24, quai Ernest-Ansermet 1211 GENEVA 4 Tel: (022) 379 62 73 Fax: (022) 379 69 92 Wednesday 28 April 2010 PARTICLE PHYSICS SEMINAR at 17.00 hrs – Stückelberg Auditorium On our way to anti-hydrogen at rest Prof. Walter Oelert, Research Center Jülich, Germany Trapped cold atoms of anti-hydrogen are optimal for testing possible CPT violations in comparison of spectral lines and gravitational effects on matter and anti-matter. For this reason it is mandatory to optimize the properties of the clouds of anti-protons and positrons used to produce the anti-hydrogen atoms. The ATRAP-collaboration at CERNs AD did perform such experiments by studying the temperature of these clouds and their stability at different conditions. Though detailed tests have been performed to verify the trapping of anti-hydrogen atoms in a magnetic gradient field no statistically significant signal was detected yet. Re...

  6. The Dynamics of Coalition Formation on Complex Networks

    Science.gov (United States)

    Auer, S.; Heitzig, J.; Kornek, U.; Schöll, E.; Kurths, J.

    2015-08-01

    Complex networks describe the structure of many socio-economic systems. However, in studies of decision-making processes the evolution of the underlying social relations are disregarded. In this report, we aim to understand the formation of self-organizing domains of cooperation (“coalitions”) on an acquaintance network. We include both the network’s influence on the formation of coalitions and vice versa how the network adapts to the current coalition structure, thus forming a social feedback loop. We increase complexity from simple opinion adaptation processes studied in earlier research to more complex decision-making determined by costs and benefits, and from bilateral to multilateral cooperation. We show how phase transitions emerge from such coevolutionary dynamics, which can be interpreted as processes of great transformations. If the network adaptation rate is high, the social dynamics prevent the formation of a grand coalition and therefore full cooperation. We find some empirical support for our main results: Our model develops a bimodal coalition size distribution over time similar to those found in social structures. Our detection and distinguishing of phase transitions may be exemplary for other models of socio-economic systems with low agent numbers and therefore strong finite-size effects.

  7. Production of relativistic anti-hydrogen atoms by pair production with positron capture and measurement of the Lamb shift

    Science.gov (United States)

    Munger, C. T.; Brodsky, S. J.; Schmidt, I.

    1992-09-01

    A beam of relativistic antihydrogen atoms - the bound state (bar-p)e(+) - can be created by circulating the beam of an antiproton storage ring through an internal gas target. An antiproton which passes through the Coulomb field of a nucleus will create e(+)e(-) pairs, and antihydrogen will form when a positron is created in a bound instead of continuum state about the antiproton. The cross section for this process is roughly 1 Z(exp 2) pb for antiproton momenta above 6 GeV/c. A sample of 200 antihydrogen atoms in a low-emittance, neutral beam will be made in 1994 as an accidental byproduct of Fermilab experiment E760. We describe a simple experiment, Fermilab Proposal P862, which can detect this beam, and outline how a sample of a few 10(exp 4) atoms can be used to measure the antihydrogen Lamb shift to 1 percent.

  8. Production of relativistic antihydrogen atoms by pair production with positron capture and measurement of the Lamb shift

    Science.gov (United States)

    Munger, Charles T.; Brodsky, Stanley J.; Schmidt, Ivan

    1993-12-01

    A beam of relativistic antihydrogen atoms — the bound state (bar pe+) — can be created by circulating the beam of an antiproton storage ring through an internal gas target. An antiproton which passes through the Coulomb field of a nucleus will create e+e- pairs, and antihydrogen will form when a positron is created in a bound instead of continuum state about the antiproton. The cross section for this process is roughly 3 Z 2 pb for antiproton momenta about 6 GeV/ c. A sample of 600 antihydrogen atoms in a low-emittance, neutral beam will be made in 1995 as an accidental byproduct of Fermilab experiment E760. We describe a simple experiment, Fermilab Proposal P862, which can detect this beam, and outline how a sample of a few-104 atoms can be used to measure the antihydrogen Lamb shift to 1 %.

  9. Pattern formation and coexistence domains for a nonlocal population dynamics

    CERN Document Server

    da Cunha, J A R; Oliveira, F A

    2011-01-01

    In this communication we propose a most general equation to study pattern formation for one-species population and their limit domains in systems of length L. To accomplish this we include non-locality in the growth and competition terms where the integral kernels are now depend on characteristic length parameters alpha and beta. Therefore, we derived a parameter space (alpha,beta) where it is possible to analyze a coexistence curve alpha*=alpha*(\\beta) which delimits domains for the existence (or not) of pattern formation in population dynamics systems. We show that this curve has an analogy with coexistence curve in classical thermodynamics and critical phenomena physics. We have successfully compared this model with experimental data for diffusion of Escherichia coli populations.

  10. Finite size effects in the dynamics of opinion formation

    CERN Document Server

    Toral, R; Tessone, Claudio J.; Toral, Raul

    2006-01-01

    For some models of relevance in the social sciences we review some examples in which system size plays an important role in the final outcome of the dynamics. We discuss the conditions under which changes of behavior can appear only when the number of agents in the model takes a finite value. Those changes of behavior can be related to the apparent phase transitions that appear in some physical models. We show examples in the Galam's model of opinion transmission and the Axelrod's model of culture formation stressing the role that the network of interactions has on the main results of both models. Finally, we present the phenomenon of system-size stochastic resonance by which a forcing signal (identified as an advertising agent) is optimally amplified by a population of the right (intermediate) size. Our work stresses the role that the system size has in the dynamics of social systems and the inappropriateness of taking the thermodynamic limit for these systems.

  11. Dynamic Cell Formation based on Multi-objective Optimization Model

    Directory of Open Access Journals (Sweden)

    Guozhu Jia

    2013-08-01

    Full Text Available In this paper, a multi-objective model is proposed to address the dynamic cellular manufacturing (DCM formation problem. This model considers four conflicting objectives: relocation cost, machine utilization, material handling cost and maintenance cost. The model also considers the situation that some machines could be shared by more than one cell at the same period. A genetic algorithm is applied to get the solution of this mathematical model. Three numerical examples are simulated to evaluate the validity of this model.  

  12. Nonlinear dynamic theory for photorefractive phase hologram formation

    Science.gov (United States)

    Kim, D. M.; Shah, R. R.; Rabson, T. A.; Tittle, F. K.

    1976-01-01

    A nonlinear dynamic theory is developed for the formation of photorefractive volume phase holograms. A feedback mechanism existing between the photogenerated field and free-electron density, treated explicitly, yields the growth and saturation of the space-charge field in a time scale characterized by the coupling strength between them. The expression for the field reduces in the short-time limit to previous theories and approaches in the long-time limit the internal or photovoltaic field. Additionally, the phase of the space charge field is shown to be time-dependent.

  13. Building better oscillators using nonlinear dynamics and pattern formation

    Indian Academy of Sciences (India)

    M C Cross; Eyal Kenig; John-Mark A Allen

    2015-03-01

    Frequency and time references play an essential role in modern technology and in living systems. The precision of self-sustained oscillations is limited by the effects of noise, which becomes evermore important as the sizes of the devices become smaller. In this paper, we review our recent theoretical results on using nonlinear dynamics and pattern formation to reduce the effects of noise and improve the frequency precision of oscillators, with particular reference to ongoing experiments on oscillators based on nanomechanical resonators. We discuss using resonator nonlinearity, novel oscillator architectures and the synchronization of arrays of oscillators, to improve the frequency precision.

  14. Trust dynamics in multi-agent coalition formation

    Science.gov (United States)

    Mikulski, Dariusz G.; Lewis, Frank L.; Gu, Edward Y.; Hudas, Greg R.

    2011-05-01

    We present a rigorous treatment of coalition formation based on trust interactions in multi-agent systems. Current literature on trust in multi-agent systems primarily deals with trust models and protocols of interaction in noncooperative scenarios. Here, we use cooperative game theory as the underlying mathematical framework to study the trust dynamics between agents as a result of their trust synergy and trust liability in cooperative coalitions. We rigorously justify the behaviors of agents for different classes of games, and discuss ways to exploit the formal properties of these games for specific applications, such as unmanned cooperative control.

  15. Dynamics of exciplex formation in rare gas media

    Energy Technology Data Exchange (ETDEWEB)

    Rojas-Lorenzo, German, E-mail: grojas37@gmail.com [Departamento de Fisica General y Matematicas, Instituto Superior de Tecnologias y Ciencias Aplicadas, La Habana (Cuba)] [Instituto de Fisica Fundamental, Consejo Superior de Investigaciones Cientificas, Serrano 123, 28006 Madrid (Spain); Rubayo-Soneira, Jesus [Departamento de Fisica General y Matematicas, Instituto Superior de Tecnologias y Ciencias Aplicadas, La Habana (Cuba); Alberti, Sebastian Fernandez [Centro de Estudios e Investigaciones, Universidad Nacional de Quilmes, Roque Saenz Pena 180, Bernal B1876BXD (Argentina)

    2009-07-30

    A hopping-surface algorithm has been used to simulate the dynamics induced in rare gas matrices due to the photoexcitation ({sup 1}S{sub 0} {yields} {sup 3}P{sub 1}) of atomic mercury embedded in them. Especially, the study of the dynamics of an exciplex formation in a model system consisting of solid xenon doped with atomic mercury. The process starts upon the photoexcitation of the Hg atom to its {sup 3}P{sub 1} electronic excited state. Diatomics-in-Molecule approach has been used for constructing the adiabatic potential surfaces. In all trajectories we show that a triatomic Xe-Hg{sup *}-Xe complex is formed, but in two conformations: bent and linear. The mechanisms leading to the formation of one or the other are identified. Mainly, are noted the thermal fluctuations of the Hg impurity and the shape of the potential surfaces. Furthermore, we show that non-radiative intrastate relaxation occurs via a conical intersection between the excited state surfaces. The simulated spectra are in very good agreement with the experimental data.

  16. Molecular dynamics study of the primary ferrofluid aggregate formation

    Energy Technology Data Exchange (ETDEWEB)

    Tanygin, B.M., E-mail: b.m.tanygin@gmail.com [Radiophysics Department, Taras Shevchenko Kyiv National University, 4G, Acad. Glushkov Ave., Kyiv UA-03127 (Ukraine); Kovalenko, V.F.; Petrychuk, M.V.; Dzyan, S.A. [Radiophysics Department, Taras Shevchenko Kyiv National University, 4G, Acad. Glushkov Ave., Kyiv UA-03127 (Ukraine)

    2012-11-15

    Investigations of the phase transitions and self-organization in the magnetic aggregates are of the fundamental and applied interest. The long-range ordering structures described in the Tomanek's systematization (M. Yoon, and D. Tomanek, 2010 ) are not yet obtained in the direct molecular dynamics simulations. The resulted structures usually are the linear chains or circles, or, else, amorphous (liquid) formations. In the present work, it was shown, that the thermodynamically equilibrium primary ferrofluid aggregate has either the long-range ordered or liquid phase. Due to the unknown steric layer force and other model idealizations, the clear experimental verification of the real equilibrium phase is still required. The predicted long-range ordered (crystallized) phase produces the faceting shape of the primary ferrofluid aggregate, which can be recognized experimentally. The medical (antiviral) application of the crystallized aggregates has been suggested. Dynamic formation of all observed ferrofluid nanostructures conforms to the Tomanek's systematization. - Highlights: Black-Right-Pointing-Pointer Primary ferrofluid aggregate has either the long-range ordered or liquid phase. Black-Right-Pointing-Pointer Simulation of ferrofluid nanostructures conforms to the Tomanek's systematization. Black-Right-Pointing-Pointer Long-range ordered phase produces the faceting shape. Black-Right-Pointing-Pointer The medical (antiviral) application is possible.

  17. The Formation and Dynamics of Super-Earth Planets

    CERN Document Server

    Haghighipour, Nader

    2013-01-01

    Super-Earths, objects slightly larger than Earth and slightly smaller than Uranus, have found a special place in exoplanetary science. As a new class of planetary bodies, these objects have challenged models of planet formation at both ends of the spectrum and have triggered a great deal of research on the composition and interior dynamics of rocky planets in connection to their masses and radii. Being relatively easier to detect than an Earth-sized planet at 1 AU around a G star, super-Earths have become the focus of worldwide observational campaigns to search for habitable planets. With a range of masses that allows these objects to retain moderate atmospheres and perhaps even plate tectonics, super-Earths may be habitable if they maintain long-term orbits in the habitable zones of their host stars. Given that in the past two years a few such potentially habitable super-Earths have in fact been discovered, it is necessary to develop a deep understanding of the formation and dynamical evolution of these obje...

  18. Dynamics of biofilm formation during anaerobic digestion of organic waste.

    Science.gov (United States)

    Langer, Susanne; Schropp, Daniel; Bengelsdorf, Frank R; Othman, Maazuza; Kazda, Marian

    2014-10-01

    Biofilm-based reactors are effectively used for wastewater treatment but are not common in biogas production. This study investigated biofilm dynamics on biofilm carriers incubated in batch biogas reactors at high and low organic loading rates for sludge from meat industry dissolved air flotation units. Biofilm formation and dynamics were studied using various microscopic techniques. Resulting micrographs were analysed for total cell numbers, thickness of biofilms, biofilm-covered surface area, and the area covered by extracellular polymeric substances (EPS). Cell numbers within biofilms (10(11) cells ml(-1)) were up to one order of magnitude higher compared to the numbers of cells in the fluid reactor content. Further, biofilm formation and structure mainly correlated with the numbers of microorganisms present in the fluid reactor content and the organic loading. At high organic loading (45 kg VS m(-3)), the thickness of the continuous biofilm layer ranged from 5 to 160 μm with an average of 51 μm and a median of 26 μm. Conversely, at lower organic loading (15 kg VS m(-3)), only microcolonies were detectable. Those microcolonies increased in their frequency of occurrence during ongoing fermentation. Independently from the organic loading rate, biofilms were embedded completely in EPS within seven days. The maturation and maintenance of biofilms changed during the batch fermentation due to decreasing substrate availability. Concomitant, detachment of microorganisms within biofilms was observed simultaneously with the decrease of biogas formation. This study demonstrates that biofilms of high cell densities can enhance digestion of organic waste and have positive effects on biogas production.

  19. Raindrop impact on sand: dynamic and crater formation

    Science.gov (United States)

    Zhao, Song-Chuan; de Jong, Rianne; van der Meer, Devaraj

    2015-03-01

    Droplet impact on a granular bed is very common in nature, industry, and agriculture and extends from raindrops falling on earth to wet granulation in the production process of many pharmaceuticals. In contrast to more traditionally studied impact phenomena, such as a droplet impact on solid substrate and solid object impact on fluid-like substrate, raindrop impact on sand induces more complicated interactions. First, both the intruder and the target deform during impact; second, the liquid composing the droplet may penetrate into the substrate during the impact and may, in the end, completely merge with the grains. These complex interactions between the droplet intruder and the granular target create the very diverse crater morphologies that has been described in the literature. An appealing and natural question is how the craters are formed. To gain insight in the mechanism of crater formation, we resolve the dynamics with high-speed laser profilometry and study the dependence of the dynamics on impact speed and packing fraction of the granular substrate. Finally, we establish a dynamical model to explain the various crater morphologies.

  20. Narrowband solid state vuv coherent source for laser cooling of antihydrogen

    Energy Technology Data Exchange (ETDEWEB)

    Michan, J. Mario [TRIUMF (Canada); Polovy, Gene; Madison, Kirk W. [The University of British Columbia, Department of Physics and Astronomy (Canada); Fujiwara, Makoto C. [TRIUMF (Canada); Momose, Takamasa, E-mail: momose@chem.ubc.ca [The University of British Columbia, Department of Chemistry, Department of Physics and Astronomy (Canada)

    2015-11-15

    We describe the design and performance of a solid-state pulsed source of narrowband (< 100 MHz) Lyman-α radiation designed for the purpose of laser cooling magnetically trapped antihydrogen. Our source utilizes an injection seeded Ti:Sapphire amplifier cavity to generate intense radiation at 729.4 nm, which is then sent through a frequency doubling stage and a frequency tripling stage to generate 121.56 nm light. Although the pulse energy at 121.56 nm is currently limited to 12 nJ with a repetition rate of 10 Hz, we expect to obtain greater than 0.1 μJ per pulse at 10 Hz by further optimizing the alignment of the pulse amplifier and the efficiency of the frequency tripling stage. Such a power will be sufficient for cooling a trapped antihydrogen atom from 500 mK to 20mK.

  1. In Situ Formation and Dynamical Evolution of Hot Jupiter Systems

    Science.gov (United States)

    Batygin, Konstantin; Bodenheimer, Peter H.; Laughlin, Gregory P.

    2016-10-01

    Hot Jupiters, giant extrasolar planets with orbital periods shorter than ˜10 days, have long been thought to form at large radial distances, only to subsequently experience long-range inward migration. Here, we offer the contrasting view that a substantial fraction of the hot Jupiter population formed in situ via the core-accretion process. We show that under conditions appropriate to the inner regions of protoplanetary disks, rapid gas accretion can be initiated by super-Earth-type planets, comprising 10-20 Earth masses of refractory material. An in situ formation scenario leads to testable consequences, including the expectation that hot Jupiters should frequently be accompanied by additional low-mass planets with periods shorter than ˜100 days. Our calculations further demonstrate that dynamical interactions during the early stages of planetary systems’ lifetimes should increase the inclinations of such companions, rendering transits rare. High-precision radial velocity monitoring provides the best prospect for their detection.

  2. In Situ Formation and Dynamical Evolution of Hot Jupiter Systems

    CERN Document Server

    Batygin, Konstantin; Laughlin, Gregory P

    2015-01-01

    Hot Jupiters, giant extrasolar planets with orbital periods shorter than ~10 days, have long been thought to form at large radial distances, only to subsequently experience long-range inward migration. Here, we propose that in contrast with this picture, a substantial fraction of the hot Jupiter population formed in situ via the core accretion process. We show that under conditions appropriate to the inner regions of protoplanetary disks, rapid gas accretion can be initiated by Super-Earth type planets, comprising 10-20 Earth masses of refractory composition material. An in situ formation scenario leads to testable consequences, including the expectation that hot Jupiters should frequently be accompanied by additional low-mass planets with periods shorter than ~100 days. Our calculations further demonstrate that dynamical interactions during the early stages of planetary systems' lifetimes should increase the inclinations of such companions, rendering transits rare. High-precision radial velocity monitoring p...

  3. Peculiar features of the interaction potential between hydrogen and antihydrogen at intermediate separations

    Institute of Scientific and Technical Information of China (English)

    Lee Teck-Ghee; Wong Cheuk-Yin; Wang Lee-Shien

    2008-01-01

    This paper evaluates the interaction potential between a hydrogen and an antihydrogen using the second-order perturbation theory within the framework of the four-body system in a separable two-body basis. It finds that the H-H interaction potential possesses the peculiar features of a shallow local minimum located around interatomic separations of r ~ 6a.u. and a barrier rising at r<~ 5a.u.

  4. Des atomes d'antihydrogene produits en quantites substantielles au CERN

    CERN Multimedia

    Sevestre, G

    2002-01-01

    "Des quantites relativement substantielles d'atomes d'antihydrogene a basse temperature ont ete produites cet ete au Laboratoire europeen de physique des particules, le CERN a Geneve, ouvrant la voie a une etude approfondie de cette antimatiere qui pourrait remettre en cause les theories actuelles, a annonce mercredi sur le site Internet de la revue Nature une equipe internationale de chercheurs" (1 page).

  5. Star formation in isolated AMIGA galaxies: dynamical influence of bars

    CERN Document Server

    Verley, S; Verdes-Montenegro, L; Bergond, G; Leon, S

    2007-01-01

    Star formation depends strongly both on the local environment of galaxies, and on the internal dynamics of the interstellar medium. To disentangle the two effects, we obtained, in the framework of the AMIGA project, Ha and Gunn r photometric data for more than 200 spiral galaxies lying in very low-density regions of the local Universe. We characterise the Ha emission, tracing current star formation, of the 45 largest and less inclined galaxies observed for which we estimate the torques between the gas and the bulk of the optical matter. We could subsequently study the Ha morphological aspect of these isolated spiral galaxies. Using Fourier analysis, we focus on the modes of the spiral arms and also on the strength of the bars, computing the torques between the gas and newly formed stars (Ha) and the bulk of the optical matter (Gunn r). We interpret the various bar/spiral morphologies observed in terms of the secular evolution experienced by galaxies in isolation. We also classify the different spatial distrib...

  6. Planetary Dynamics and Habitable Planet Formation In Binary Star Systems

    CERN Document Server

    Haghighipour, Nader; Pilat-Lohinger, Elke

    2009-01-01

    Whether binaries can harbor potentially habitable planets depends on several factors including the physical properties and the orbital characteristics of the binary system. While the former determines the location of the habitable zone (HZ), the latter affects the dynamics of the material from which terrestrial planets are formed (i.e., planetesimals and planetary embryos), and drives the final architecture of the planets assembly. In order for a habitable planet to form in a binary star system, these two factors have to work in harmony. That is, the orbital dynamics of the two stars and their interactions with the planet-forming material have to allow terrestrial planet formation in the habitable zone, and ensure that the orbit of a potentially habitable planet will be stable for long times. We have organized this chapter with the same order in mind. We begin by presenting a general discussion on the motion of planets in binary stars and their stability. We then discuss the stability of terrestrial planets, ...

  7. Dynamics of alliance formation and the egalitarian revolution.

    Directory of Open Access Journals (Sweden)

    Sergey Gavrilets

    Full Text Available BACKGROUND: Arguably the most influential force in human history is the formation of social coalitions and alliances (i.e., long-lasting coalitions and their impact on individual power. Understanding the dynamics of alliance formation and its consequences for biological, social, and cultural evolution is a formidable theoretical challenge. In most great ape species, coalitions occur at individual and group levels and among both kin and non-kin. Nonetheless, ape societies remain essentially hierarchical, and coalitions rarely weaken social inequality. In contrast, human hunter-gatherers show a remarkable tendency to egalitarianism, and human coalitions and alliances occur not only among individuals and groups, but also among groups of groups. These observations suggest that the evolutionary dynamics of human coalitions can only be understood in the context of social networks and cognitive evolution. METHODOLOGY/PRINCIPAL FINDINGS: Here, we develop a stochastic model describing the emergence of networks of allies resulting from within-group competition for status or mates between individuals utilizing dyadic information. The model shows that alliances often emerge in a phase transition-like fashion if the group size, awareness, aggressiveness, and persuasiveness of individuals are large and the decay rate of individual affinities is small. With cultural inheritance of social networks, a single leveling alliance including all group members can emerge in several generations. CONCLUSIONS/SIGNIFICANCE: We propose a simple and flexible theoretical approach for studying the dynamics of alliance emergence applicable where game-theoretic methods are not practical. Our approach is both scalable and expandable. It is scalable in that it can be generalized to larger groups, or groups of groups. It is expandable in that it allows for inclusion of additional factors such as behavioral, genetic, social, and cultural features. Our results suggest that a rapid

  8. Dynamics of Drop Formation in an Electric Field.

    Science.gov (United States)

    Notz; Basaran

    1999-05-01

    The effect of an electric field on the formation of a drop of an inviscid, perfectly conducting liquid from a capillary which protrudes from the top plate of a parallel-plate capacitor into a surrounding dynamically inactive, insulating gas is studied computationally. This free boundary problem which is comprised of the surface Bernoulli equation for the transient drop shape and the Laplace equation for the velocity potential inside the drop and the electrostatic potential outside the drop is solved by a method of lines incorporating the finite element method for spatial discretization. The finite element algorithm employed relies on judicious use of remeshing and element addition to a two-region adaptive mesh to accommodate large domain deformations, and allows the computations to proceed until the thickness of the neck connecting an about to form drop to the rest of the liquid in the capillary is less than 0.1% of the capillary radius. The accuracy of the computations is demonstrated by showing that in the absence of an electric field predictions made with the new algorithm are in excellent agreement with boundary integral calculations (Schulkes, R. M. S. M. J. Fluid Mech. 278, 83 (1994)) and experimental measurements on water drops (Zhang, X., and Basaran, O. A. Phys. Fluids 7(6), 1184 (1995)). In the presence of an electric field, the algorithm predicts that as the strength of the applied field increases, the mode of drop formation changes from simple dripping to jetting to so-called microdripping, in accordance with experimental observations (Cloupeau, M., and Prunet-Foch, B. J. Aerosol Sci. 25(6), 1021 (1994); Zhang, X., and Basaran, O. A. J. Fluid Mech. 326, 239 (1996)). Computational predictions of the primary drop volume and drop length at breakup are reported over a wide range of values of the ratios of electrical, gravitational, and inertial forces to surface tension force. In contrast to previously mentioned cases where both the flow rate in the tube

  9. Cellulose microfibril formation within a coarse grained molecular dynamics

    Science.gov (United States)

    Nili, Abdolmadjid; Shklyaev, Oleg; Crespi, Vincent; Zhao, Zhen; Zhong, Linghao; CLSF Collaboration

    2014-03-01

    Cellulose in biomass is mostly in the form of crystalline microfibrils composed of 18 to 36 parallel chains of polymerized glucose monomers. A single chain is produced by cellular machinery (CesA) located on the preliminary cell wall membrane. Information about the nucleation stage can address important questions about intermediate region between cell wall and the fully formed crystalline microfibrils. Very little is known about the transition from isolated chains to protofibrils up to a full microfibril, in contrast to a large body of studies on both CesA and the final crystalline microfibril. In addition to major experimental challenges in studying this transient regime, the length and time scales of microfibril nucleation are inaccessible to atomistic molecular dynamics. We have developed a novel coarse grained model for cellulose microfibrils which accounts for anisotropic interchain interactions. The model allows us to study nucleation, kinetics, and growth of cellulose chains/protofibrils/microfibrils. This work is supported by the US Department of Energy, Office of Basic Energy Sciences as part of The Center for LignoCellulose Structure and Formation, an Energy Frontier Research Center.

  10. Pseudobulge Formation as a Dynamical Rather than a Secular Process

    CERN Document Server

    Guedes, Javiera; Carollo, Marcella; Madau, Piero

    2012-01-01

    We investigate the formation and evolution of the pseudobulge in "Eris", a high-resolution N-body + smoothed particle hydrodynamics (SPH) cosmological simulation that successfully reproduces a Milky Way-like massive late-type spiral in a cold dark matter (LCDM) universe. At the present epoch, Eris has a virial mass Mvir=8x10^11 Msun, a photometric stellar mass M*=3.2x10^10 Msun, a bulge-to-total ratio B/T = 0.26, and a weak nuclear bar. We find that the bulk of the pseudobulge forms quickly at high redshift via a combination of non-axisymmetric disk instabilities and tidal interactions or mergers both occurring on dynamical timescales, not through slow secular processes at lower redshift. Its subsequent evolution is not strictly secular either, and is closely intertwined with the evolution of the stellar bar. In fact, the structure that we recognize as a pseudobulge today evolves from a stellar bar that formed at high redshift, was destroyed by minor mergers at z~3, reformed shortly after, and weakened again ...

  11. Extracellular matrix proteins and the dynamics of dentin formation.

    Science.gov (United States)

    Butler, William T; Brunn, Jan C; Qin, Chunlin; McKee, Marc D

    2002-01-01

    Dentinogenesis involves controlled reactions that result in conversion of unmineralized predentin to dentin when apatite crystals are formed. This process is dynamic: Maturation events occur within predentin beginning at the proximal layer and progressing to the predentin-dentin (PD) border. One type of controlled reaction is the proteolytic processing of dentin sialophosphoprotein (DSPP) to dentin sialoprotein (DSP) and dentin phosphoprotein (DPP), by cleavage of at least three highly conserved peptide bonds. We postulate that this processing event represents an activation step, resulting in release of DPP, which is active in its effects on formation and growth of apatite crystals. Dentin matrix protein 1 (DPM1), present as a processed fragment (57-kD protein) in bone, is seen in dentin on sodium dodecyl sulfate polyacrylamide gel electrophoresis as one intact protein of 150-200 kD. Anti-57-kD antibodies elicit immunoreactivity in bone, dentin, and cellular cementum. In bone, the reactivity is associated with osteocytes and their cell processes. Similarly, dentin shows reactivity in odontoblasts, predentin, and the odontoblast processes. In summary, the processing of large sialic acid-rich proteins into smaller fragments may be an important part of the controlled conversion of predentin to dentin and osteoid to bone.

  12. An atomic hydrogen beam to test ASACUSA’s apparatus for antihydrogen spectroscopy

    Energy Technology Data Exchange (ETDEWEB)

    Diermaier, M., E-mail: martin.diermaier@oeaw.ac.at; Caradonna, P.; Kolbinger, B. [Austrian Academy of Sciences, Stefan Meyer Institute for Subatomic Physics (Austria); Malbrunot, C. [CERN (Switzerland); Massiczek, O.; Sauerzopf, C.; Simon, M. C.; Wolf, M.; Zmeskal, J.; Widmann, E. [Austrian Academy of Sciences, Stefan Meyer Institute for Subatomic Physics (Austria)

    2015-08-15

    The ASACUSA collaboration aims to measure the ground state hyperfine splitting (GS-HFS) of antihydrogen, the antimatter counterpart to atomic hydrogen. Comparisons of the corresponding transitions in those two systems will provide sensitive tests of the CPT symmetry, the combination of the three discrete symmetries charge conjugation, parity, and time reversal. For offline tests of the GS-HFS spectroscopy apparatus we constructed a source of cold polarised atomic hydrogen. In these proceedings we report the successful observation of the hyperfine structure transitions of atomic hydrogen with our apparatus in the earth’s magnetic field.

  13. Prospects of In-Flight Hyperfine Spectroscopy of (Anti)Hydrogen for Tests of CPT Symmetry

    CERN Document Server

    Widmann, Eberhard

    2016-01-01

    The ground-state hyperfine splitting of antihydrogen promises one of the most sensitive tests of CPT symmetry. The ASACUSA collaboration is pursuing a measurement of this splitting in a Rabi-type experiment using a polarized beam from a CUSP magnet at the Antiproton Decelerator of CERN. With the initial intention of characterizing the Rabi apparatus, a polarized source of cold hydrogen was built and the $\\sigma_1$ transition of hydrogen was measured to a few ppb precision. A measurement of the $\\pi_1$ transition is being prepared. The availability of this beam opens the possibility to perform first measurements of some coefficients within the nonminimal Standard-Model Extension.

  14. Rotational Brownian Dynamics simulations of clathrin cage formation

    Energy Technology Data Exchange (ETDEWEB)

    Ilie, Ioana M.; Briels, Wim J. [Computational BioPhysics, Faculty of Science and Technology, University of Twente, P.O. Box 217, 7500 AE Enschede (Netherlands); MESA+ Institute for Nanotechnology, University of Twente, P.O. Box 217, 7500 AE Enschede (Netherlands); Otter, Wouter K. den, E-mail: w.k.denotter@utwente.nl [Computational BioPhysics, Faculty of Science and Technology, University of Twente, P.O. Box 217, 7500 AE Enschede (Netherlands); MESA+ Institute for Nanotechnology, University of Twente, P.O. Box 217, 7500 AE Enschede (Netherlands); Multi Scale Mechanics, Faculty of Engineering Technology, University of Twente, P.O. Box 217, 7500 AE Enschede (Netherlands)

    2014-08-14

    The self-assembly of nearly rigid proteins into ordered aggregates is well suited for modeling by the patchy particle approach. Patchy particles are traditionally simulated using Monte Carlo methods, to study the phase diagram, while Brownian Dynamics simulations would reveal insights into the assembly dynamics. However, Brownian Dynamics of rotating anisotropic particles gives rise to a number of complications not encountered in translational Brownian Dynamics. We thoroughly test the Rotational Brownian Dynamics scheme proposed by Naess and Elsgaeter [Macromol. Theory Simul. 13, 419 (2004); Naess and Elsgaeter Macromol. Theory Simul. 14, 300 (2005)], confirming its validity. We then apply the algorithm to simulate a patchy particle model of clathrin, a three-legged protein involved in vesicle production from lipid membranes during endocytosis. Using this algorithm we recover time scales for cage assembly comparable to those from experiments. We also briefly discuss the undulatory dynamics of the polyhedral cage.

  15. Oman metamorphic sole formation reveals early subduction dynamics

    Science.gov (United States)

    Soret, Mathieu; Agard, Philippe; Dubacq, Benoît; Plunder, Alexis; Ildefonse, Benoît; Yamato, Philippe; Prigent, Cécile

    2016-04-01

    Metamorphic soles correspond to m to ~500m thick tectonic slices welded beneath most of the large-scale ophiolites. They typically show a steep inverted metamorphic structure where the pressure and temperature conditions of crystallization increase upward (from 500±100°C at 0.5±0.2 GPa to 800±100°C at 1.0±0.2 GPa), with isograds subparallel to the contact with the overlying ophiolitic peridotite. The proportion of mafic rocks in metamorphic soles also increases from the bottom (meta-sediments rich) to the top (approaching the ophiolite peridotites). These soles are interpreted as the result of heat transfer from the incipient mantle wedge toward the nascent slab (associated with large-scale fluid transfer and possible shear heating) during the first My of intra-oceanic subduction (as indicated by radiometric ages). Metamorphic soles provide therefore major constraints on early subduction dynamics (i.e., thermal structure, fluid migration and rheology along the nascent slab interface). We present a detailed structural and petrological study of the metamorphic sole from 4 major cross-sections along the Oman ophiolite. We show precise pressure-temperature estimates obtained by pseudosection modelling and EBSD measurements performed on both the garnet-bearing and garnet-free high-grade sole. Results allow quantification of the micro-scale deformation and highlight differences in pressure-temperature-deformation conditions between the 4 different locations, showing that the inverted metamorphic gradient through the sole is not continuous in all locations. Based on these new constraints, we suggest a new tectonic-petrological model for the formation of metamorphic soles below ophiolites. This model involves the stacking of several homogeneous slivers of oceanic crust leading to the present-day structure of the sole. In this view, these thrusts are the result of rheological contrasts between the sole and the peridotite as the plate interface progressively cools down

  16. Discrete Dynamical Models Showing Pattern Formation in Subaqueous Bedforms

    CERN Document Server

    Tufillaro, N B

    1993-01-01

    Abstract: A new class of ``toy models'' for subaqueous bedform formation are proposed and examined. These models all show a similar mechanism of wavelength selection via bedform unification, and they may have applications to bedform stratigraphy. The models are also useful for exploring general issues of pattern formation and complexity in stochastically driven far from equilibrium systems.

  17. Dynamic Transition and Pattern Formation in Taylor Problem

    Institute of Scientific and Technical Information of China (English)

    Tian MA; Shouhong WANG

    2010-01-01

    The main objective of this article is to study both dynamic and structural transitions of the Taylor-Couette flow,by using the dynamic transition theory and geometric theory of incompressible flows developed recently by the authors.In particular,it is shown that as the Taylor number crosses the critical number,the system undergoes either a continuous or a jump dynamic transition,dictated by the sign of a computable,nondimensional parameter R.In addition,it is also shown that the new transition states have the Taylor vortex type of flow structure,which is structurally stable.

  18. Research on framework for formation control of multiple underwater robots in a dynamic environment

    Science.gov (United States)

    Meng, Xian-Song; Xu, Hong-Gen; Zhang, Ming-Jun

    2004-12-01

    In this paper a practical framework is proposed to keep formation control of multiple underwater robots in a dynamic environment. The approach is a viable solution to solve formation problem. The approach allows online planning of the formation paths using a Dijkstra’s search algorithm based on the current sensor data. The formation is allowed to be dynamically changed in order to avoid obstacles in the environment. A controller is designed to keep the robots in their planned trajectories. It is shown that the approach is effective and feasible by the simulation of computer.

  19. Nonlinear Dynamics, Lorenz Model and Formation of Binary Stars

    OpenAIRE

    Chang, Yi-Fang

    2008-01-01

    Based on the Lorenz model derived from the equations of hydrodynamics of nebula, we discuss the formation of binary stars by the qualitative analysis theory of nonlinear equation. Here the two wings in the Lorenz model form just the binary stars, whose Roche surface is result of evolution under certain condition. The nonlinear interaction plays a crucial role, and is necessary condition of the formation of binary stars and of multiple stars. While the linear equations form only a single star....

  20. Dynamic dimer formation between superionic fluorines in PbF2

    Science.gov (United States)

    Nakamura, Nobutaka; Tsumuraya, Kazuo

    2013-03-01

    Recently Tsumuraya et al .(J. Phys. Soc. Jpn. 81,055603(2012).) have elucidated the formation of the dynamic dimers in the superionic conductor α-CuI with the first principles molecular dynamics (MD) method. They, for the first time in research, confirmed the dimer formation through the analyses the origin of the correlation peaks of the partial pair distribution functions and the partial angle distribution functions. The present study elucidates the dynamic structure of the superionc fluorines in PbF2 crystal with the MD method through identifying the origins of the correlation peaks. The fluorines form the dynamic 32 f-8 c and 4 b-8 c dimers.

  1. Methodological Framework Of Formation Structural-Dynamic Theory Inside Environmental Management System

    OpenAIRE

    Lubov Zharova

    2012-01-01

    In the article the results of analysis of modern theoretical trends and practical examples in framework of nature management are represented. The series of propositions for formation structure-dynamic theory are formulated.

  2. A Broad Dynamical Model for Pattern Formation by Lateral Inhibition

    CERN Document Server

    Arcak, Murat

    2012-01-01

    Many patterning events in multi-cellular organisms rely on cell-to-cell contact signaling, such as the Notch pathway in metazoans. A particularly interesting phenomenon in this form of communication is lateral inhibition where a cell that adopts a particular fate inhibits its immediate neighbors from doing the same. Dynamical models are of great interest for understanding the circuit topologies involved in lateral inhibition and for predicting the associated patterns. Several simplified models have been employed for Notch signalling pathways in the literature. The objective of this paper is to present an abstract dynamical model that captures the essential features of lateral inhibition and to demonstrate with dynamical systems techniques that these features indeed lead to patterning.

  3. The formation of cosmic structure with modified Newtonian dynamics

    NARCIS (Netherlands)

    Sanders, R. H.

    2001-01-01

    I consider the growth of inhomogeneities in a low-density, baryonic, vacuum energy-dominated universe in the context of modified Newtonian dynamics (MOND). I first write down a two-field Langrangian-based theory of MOND (nonrelativistic) that embodies several assumptions, such as constancy of the MO

  4. A demographic approach to firm dynamics: formation of new firms and survival of old ones

    NARCIS (Netherlands)

    Nijkamp, P.; Geenhuizen, van M.

    1995-01-01

    This paper introduces a new approach to firm dynamics, named demography of firms. It is the study of demographic events in a population of firms. Thepaper argues that withina demographic approach, attention should be paid to a broad range of firm dynamics, including both new firm formation and survi

  5. Dynamic Slicing: a Generic Analysis Based on a Natural Semantics Format

    OpenAIRE

    Gouranton, Valérie; Le Métayer, Daniel

    1998-01-01

    Slicing analyses have been proposed for different programming languages. Rather than defining a new analysis from scratch for each programming language, we would like to specify such an analysis once for all, in a language-independent way, and then specialise it for different programming languages. In order to achieve this goal, we propose a notion of natural semantics format and a dynamic slicing analysis format. The natural semantics format formalises a class of natural semantics and the an...

  6. Opinion Formation and the Collective Dynamics of Risk Perception

    CERN Document Server

    Moussaid, Mehdi

    2014-01-01

    The formation of collective opinion is a complex phenomenon that results from the combined effects of mass media exposure and social influence between individuals. The present work introduces a model of opinion formation specifically designed to address risk judgments, such as attitudes towards climate change, terrorist threats, or children vaccination. The model assumes that people collect risk information from the media environment and exchange them locally with other individuals. Even though individuals are initially exposed to the same sample of information, the model predicts the emergence of opinion polarization and clustering. In particular, numerical simulations highlight two crucial factors that determine the collective outcome: the propensity of individuals to search for independent information, and the strength of social influence. This work provides a quantitative framework to anticipate and manage how the public responds to a given risk, and could help understanding the systemic amplification of ...

  7. Dynamics of fingering convection II: The formation of thermohaline staircases

    CERN Document Server

    Stellmach, S; Garaud, P; Brummell, N; Radko, T

    2010-01-01

    Regions of the ocean's thermocline unstable to salt fingering are often observed to host thermohaline staircases, stacks of deep well-mixed convective layers separated by thin stably-stratified interfaces. Decades after their discovery, however, their origin remains controversial. In this paper we use 3D direct numerical simulations to shed light on the problem. We study the evolution of an analogous double-diffusive system, starting from an initial statistically homogeneous fingering state and find that it spontaneously transforms into a layered state. By analysing our results in the light of the mean-field theory developed in Paper I, a clear picture of the sequence of events resulting in the staircase formation emerges. A collective instability of homogeneous fingering convection first excites a field of gravity waves, with a well-defined vertical wavelength. However, the waves saturate early through regular but localized breaking events, and are not directly responsible for the formation of the staircase....

  8. A dynamic model of droplet formation in GMA welding

    International Nuclear Information System (INIS)

    A comparative analysis of different approaches is carried out, which mathematically describes the metal droplet formation process in an electrode during gas metal arc (GMA) welding. It was shown that a hydrostatical model of the droplet's free surface could not correctly describe the formation and transfer of electrode metal droplets. The complete hydrodynamic model, which uses the whole system of Navier–Stokes equations, requires significant computer resources for numerical realization. This limits its application to small computational experiments. As an alternative for this model, the approximate hydrodynamic model adapted to GMA welding conditions is considered. It is shown that this model allows the prediction of droplet geometry right up to its detachment. The influence of the welding current and magnetic pressure on the droplet size and detachment frequency is studied. (paper)

  9. Dynamics of Aerial Tower Formation in Bacillus subtilis Biofilms

    Science.gov (United States)

    Sinha, Naveen; Seminara, Agnese; Wilking, James; Brenner, Michael; Weitz, Dave

    2012-02-01

    Biofilms are highly-organized colonies of bacteria that form on surfaces. These colonies form sophisticated structures which make them robust and difficult to remove from environments such as catheters, where they pose serious infection problems. Previous work has shown that sub-mm sized aerial towers form on the surface of Bacillus subtilis colony biofilms. Spore-formation is located preferentially at the tops of these towers, known as fruiting bodies, which aid in the dispersal and propagation of the colony to new sites. The formation of towers is strongly affected by the quorum-sensing molecule surfactin and the cannibalism pathway of the bacteria. In the present work, we use confocal fluorescence microscopy to study the development of individual fruiting bodies, allowing us to visualize the time-dependent spatial distribution of matrix-forming and sporulating bacteria within the towers. With this information, we investigate the physical mechanisms, such as surface tension and polymer concentration gradients, that drive the formation of these structures.

  10. NGC6240: Merger-Induced Star Formation & Gas Dynamics

    CERN Document Server

    Engel, H; Genzel, R; Tacconi, L J; Hicks, E K S; Sturm, E; Naab, T; Johansson, P H; Karl, S J; Max, C E; Medling, A; van der Werf, P P

    2010-01-01

    We present spatially resolved integral field spectroscopic K-band data at a resolution of 0.13" (60pc) and interferometric CO(2-1) line observations of the prototypical merging system NGC6240. Despite the clear rotational signature, the stellar kinematics in the two nuclei are dominated by dispersion. We use Jeans modelling to derive the masses and the mass-to-light ratios of the nuclei. Combining the luminosities with the spatially resolved Br-gamma equivalent width shows that only 1/3 of the K-band continuum from the nuclei is associated with the most recent star forming episode; and that less than 30% of the system's bolometric luminosity and only 9% of its stellar mass is due to this starburst. The star formation properties, calculated from typical merger star formation histories, demonstrate the impact of different assumptions about the star formation history. The properties of the nuclei, and the existence of a prominent old stellar population, indicate that the nuclei are remnants of the progenitor gal...

  11. On the Interface Formation Model for Dynamic Triple Lines

    CERN Document Server

    Bothe, Dieter

    2015-01-01

    This paper revisits the theory of Y. Shikhmurzaev on forming interfaces as a continuum thermodynamical model for dynamic triple lines. We start with the derivation of the balances for mass, momentum, energy and entropy in a three-phase fluid system with full interfacial physics, including a brief review of the relevant transport theorems on interfaces and triple lines. Employing the entropy principle in the form given in [Bothe & Dreyer, Acta Mechanica, doi:10.1007/s00707-014-1275-1] but extended to this more general case, we arrive at the entropy production and perform a linear closure, except for a nonlinear closure for the sorption processes. Specialized to the isothermal case, we obtain a thermodynamically consistent mathematical model for dynamic triple lines and show that the total available energy is a strict Lyapunov function for this system.

  12. Dynamically-induced structures formation in congested magma

    Science.gov (United States)

    Petford, N.

    2008-12-01

    Crystal fabrics preserved in igneous rocks offer a glimpse into the magma emplacement process. Detailed field mapping, in combination with AMS studies, seem to provide the best available data for unravelling intrusion architecture on the decimetre scale. However, a full and proper understanding of the fluid dynamics of congested fluid-particle mixtures during shear remains elusive. This is a shame as without recourse to such fundamental understanding, the interpretation of structural field data in the context of magma flow remains problematic. One way to gain insight into the process is to treat flowing magma as a dynamic material with a rheology similar to sheared, congested slurries. The fancy that dense magma equates to a high temperature slurry is an attractive one, and opens up a way to examine the emplacement process that does not rely exclusively on equilibrium thermodynamics as a final explanation of commonly observed igneous structures. Instead, using examples from mafic rocks where cooling has been rapid, the idea is put forward that in high Peclet number suspensions (where particle diffusion is negligible), shearing and non- Newtonian behaviour imparts a rich diversity of structures including layering, grading and flow segregation. Key to understanding the rheology, hence flow dynamics of congested magma, is the particle microstructure, a still poorly known essence of suspension flows. Where magma transport is continental in scale and long lived (e.g. Large Igneous Provinces), rotation of the earth may in theory endow a small but potentially measurable imprint on the preserved flow fabric.

  13. Formation and nonlinear dynamics of the squeezed state of a helical electron beam with additional deceleration

    Science.gov (United States)

    Egorov, E. N.; Koronovskii, A. A.; Kurkin, S. A.; Hramov, A. E.

    2013-11-01

    Results of numerical simulations and analysis of the formation and nonlinear dynamics of the squeezed state of a helical electron beam in a vircator with a magnetron injection gun as an electron source and with additional electron deceleration are presented. The ranges of control parameters where the squeezed state can form in such a system are revealed, and specific features of the system dynamics are analyzed. It is shown that the formation of a squeezed state of a nonrelativistic helical electron beam in a system with electron deceleration is accompanied by low-frequency longitudinal dynamics of the space charge.

  14. Formation and nonlinear dynamics of the squeezed state of a helical electron beam with additional deceleration

    Energy Technology Data Exchange (ETDEWEB)

    Egorov, E. N., E-mail: evgeniy.n.egorov@gmail.com; Koronovskii, A. A.; Kurkin, S. A.; Hramov, A. E. [Chernyshevsky Saratov State University (Russian Federation)

    2013-11-15

    Results of numerical simulations and analysis of the formation and nonlinear dynamics of the squeezed state of a helical electron beam in a vircator with a magnetron injection gun as an electron source and with additional electron deceleration are presented. The ranges of control parameters where the squeezed state can form in such a system are revealed, and specific features of the system dynamics are analyzed. It is shown that the formation of a squeezed state of a nonrelativistic helical electron beam in a system with electron deceleration is accompanied by low-frequency longitudinal dynamics of the space charge.

  15. Microtubule Dynamicity Is More Important than Stability in Memory Formation: an In Vivo Study.

    Science.gov (United States)

    Atarod, Deyhim; Eskandari-Sedighi, Ghazaleh; Pazhoohi, Farid; Karimian, Seyed Morteza; Khajeloo, Mojtaba; Riazi, Gholam Hossein

    2015-06-01

    It has been shown that microtubule (MT) activity and dynamics can have huge impacts on synaptic plasticity and memory formation. This is mainly due to various functions of MTs in neurons; MTs are involved in dendritic spine formation, axonal transportation, neuronal polarity, and receptor trafficking. Recent studies from our group and other labs have suggested the possible role of brain MT dynamicity and activity in memory; however, there is a need for more detailed studies regarding this aspect. In this study, we have tried to evaluate the importance of microtubule dynamicity rather than stability in memory formation in vivo. In order to investigate the role of MT stability in memory formation, we treated mice with paclitaxel-a classic microtubule-stabilizing agent. We then studied the behavior of treated animals using Morris water maze (MWM) test. To measure the effect of injected paclitaxel on MT polymerization kinetics, we conducted polymerization assays on brain extracts of the same paclitaxel-treated animals. Our results show that paclitaxel treatment affects animals' memory in a negative way and treated animals behave poorly in MWM compared to control group. In addition, our kinetics studies show that MT stability is significantly increased in brain extracts from paclitaxel-treated mice, but MT dynamics is reduced. Thus, we suggest that dynamicity is a very important feature of MT protein structures, and regarding memory formation, dynamicity is more important than stability and high activity.

  16. The dynamics of primordial black-hole formation

    International Nuclear Information System (INIS)

    We examine numerically the formation of small black holes from primordial density fluctuations in a radiation-dominated spatially flat Friedmann-Robertson-Walker spacetime. Large amplitude fluctuations might be expected to form black holes, while smaller fluctuations will be washed out by the expansion of the universe. We have studied the interface between these two types of behaviour. Unlike earlier studies which suggested that there was no lower limit to the mass of a black hole, this work suggests that there is a minimum mass for a primordial black hole of the order of one ten thousandth of the mass contained within the horizon. We discuss the implications for critical collapse studies

  17. Global Format for Conservative Time Integration in Nonlinear Dynamics

    DEFF Research Database (Denmark)

    Krenk, Steen

    2014-01-01

    -frequency parts of the response. The energy conservation property is developed in two steps. First a fourth-order representation of the internal energy increment is obtained in terms of the mean value of the associated internal forces and an additional term containing the increment of the tangent stiffness matrix....... In the present paper a conservative time integration algorithm is developed in a format using only the internal forces and the associated tangent stiffness at the specific time integration points. Thus, the procedure is computationally very similar to a collocation method, consisting of a series of nonlinear...

  18. Dynamics of polymer film formation during spin coating

    Energy Technology Data Exchange (ETDEWEB)

    Mouhamad, Y.; Clarke, N.; Jones, R. A. L.; Geoghegan, M., E-mail: geoghegan@sheffield.ac.uk [Department of Physics and Astronomy, The University of Sheffield, Hicks Building, Hounsfield Road, Sheffield S3 7RH (United Kingdom); Mokarian-Tabari, P. [Materials Research Group, Department of Chemistry and the Tyndall National Institute, University College Cork, Cork (Ireland)

    2014-09-28

    Standard models explaining the spin coating of polymer solutions generally fail to describe the early stages of film formation, when hydrodynamic forces control the solution behavior. Using in situ light scattering alongside theoretical and semi-empirical models, it is shown that inertial forces (which initially cause a vertical gradient in the radial solvent velocity within the film) play a significant role in the rate of thinning of the solution. The development of thickness as a function of time of a solute-free liquid (toluene) and a blend of polystyrene and poly(methyl methacrylate) cast from toluene were fitted to different models as a function of toluene partial pressure. In the case of the formation of the polymer blend film, a concentration-dependent (Huggins) viscosity formula was used to account for changes in viscosity during spin coating. A semi-empirical model is introduced, which permits calculation of the solvent evaporation rate and the temporal evolution of the solute volume fraction and solution viscosity.

  19. Theoretical motivation for gravitation experiments on ultra-low energy antiprotons and antihydrogen

    Energy Technology Data Exchange (ETDEWEB)

    Nieto, M.M.

    1995-12-31

    It is known that the generally accepted theories of gravity and quantum mechanics are fundamentally incompatible. Thus, when one tries to combine these theories, one must beware of physical pitfalls. Modern theories of quantum gravity are trying to overcome these problems. Any ideas must confront the present agreement with general relativity, but yet be free to wonder about not understood phenomena, such as the dark matter problem. This all has led some {open_quotes}intrepid{close_quotes} theorists to consider a new gravitational regime, that of antimatter. Even more {open_quotes}daring{close_quotes} experimentalists are attempting, or considering attempting, the measurement of the gravitational force on antimatter, including low-energy antiprotons and, perhaps most enticing, antihydrogen.

  20. Adaptive RBFNN Formation Control of Multi-mobile Robots with Actuator Dynamics

    Directory of Open Access Journals (Sweden)

    Li Yan-dong

    2013-04-01

    Full Text Available We study the problem of formation control and trajectory tracking for multiple nonholonomic mobile robots with actuator and formation dynamics. An adaptive neural-network (NN control strategy that integrated kinematic controller with input voltages controller of actuator was proposed. A control law was designed by backstepping technique based on separation-bearing formation control structure of leader-follower. The radial basis function neural network (RBFNN was adopted to achieve on-line estimation for the dynamics nonlinear uncertain part for follower and leader robots. The adaptive robust controller was adopted to compensate modeling errors of NN. This strategy not only overcomed all kinds of uncertainties of mobile robots, but also ensured the desired trajectory tracking of robot formation in the case of maintaining formation. The stability and convergence of the control system were proved by using the Lyapunov theory. The simulation results showed the effectiveness of this proposed method.

  1. CONSENSUS FORMATION OF TWO-LEVEL OPINION DYNAMICS

    Institute of Scientific and Technical Information of China (English)

    Yilun SHANG

    2014-01-01

    Opinion dynamics have received significant attention in recent years. This pa-per proposes a bounded confidence opinion model for a group of agents with two different confidence levels. Each agent in the population is endowed with a confidence interval around her opinion with radius αd or (1-α)d, where α ∈ (0, 1/2] represents the differentiation of confidence levels. We analytically derived the critical confidence bound dc =1/(4α) for the two-level opinion dynamics on Z. A single opinion cluster is formed with probability 1 above this critical value regardless of the ratio p of agents with high/low confidence. Extensive numerical simulations are performed to illustrate our theoretical results. Noticed is a clear impact of p on the collective behavior: more agents with high confidence lead to harder agreement. It is also experimentally revealed that the sharpness of the threshold dc increases with αbut does not depend on p.

  2. Distributed Consensus-Based Robust Adaptive Formation Control for Nonholonomic Mobile Robots with Partial Known Dynamics

    Directory of Open Access Journals (Sweden)

    Zhaoxia Peng

    2014-01-01

    Full Text Available This paper investigates the distributed consensus-based robust adaptive formation control for nonholonomic mobile robots with partially known dynamics. Firstly, multirobot formation control problem has been converted into a state consensus problem. Secondly, the practical control strategies, which incorporate the distributed kinematic controllers and the robust adaptive torque controllers, are designed for solving the formation control problem. Thirdly, the specified reference trajectory for the geometric centroid of the formation is assumed as the trajectory of a virtual leader, whose information is available to only a subset of the followers. Finally, numerical results are provided to illustrate the effectiveness of the proposed control approaches.

  3. Social Influence and the Collective Dynamics of Opinion Formation

    CERN Document Server

    Moussaid, Mehdi; Analytis, Pantelis P; Neth, Hansjoerg

    2013-01-01

    Social influence is the process by which individuals adapt their opinion, revise their beliefs, or change their behavior as a result of social interactions with other people. In our strongly interconnected society, social influence plays a prominent role in many self-organized phenomena such as herding in cultural markets, the spread of ideas and innovations, and the amplification of fears during epidemics. Yet, the mechanisms of opinion formation remain poorly understood, and existing physics-based models lack systematic empirical validation. Here, we report two controlled experiments showing how participants answering factual questions revise their initial judgments after being exposed to the opinion and confidence level of others. Based on the observation of 59 experimental subjects exposed to peer-opinion for 15 different items, we draw an influence map that describes the strength of peer influence during interactions. A simple process model derived from our observations demonstrates how opinions in a gro...

  4. Development of mini linac-based positron source and an efficient positronium convertor for positively charged antihydrogen production

    Energy Technology Data Exchange (ETDEWEB)

    Muranaka, T; Debu, P; Dupre, P; Liszkay, L; Mansoulie, B; Perez, P; Rey, J M; Ruiz, N; Sacquin, Y [Irfu, CEA-Saclay, F-91191 Gif-sur-Yvette Cedex (France); Crivelli, P; Gendotti, U; Rubbia, A, E-mail: tomoko.muranaka@cea.f [Institut fuer TelichenPhysik, ETHZ, CH-8093 Zuerich (Switzerland)

    2010-04-01

    We have installed in Saclay a facility for an intense positron source in November 2008. It is based on a compact 5.5 MeV electron linac connected to a reaction chamber with a tungsten target inside to produce positrons via pair production. The expected production rate for fast positrons is 5{center_dot}10{sup 11} per second. The study of moderation of fast positrons and the construction of a slow positron trap are underway. In parallel, we have investigated an efficient positron-positronium convertor using porous silica materials. These studies are parts of a project to produce positively charged antihydrogen ions aiming to demonstrate the feasibility of a free fall antigravity measurement of neutral antihydrogen.

  5. Development of mini linac-based positron source and an efficient positronium convertor for positively charged antihydrogen production

    Science.gov (United States)

    Muranaka, T.; Debu, P.; Dupré, P.; Liszkay, L.; Mansoulie, B.; Pérez, P.; Rey, J. M.; Ruiz, N.; Sacquin, Y.; Crivelli, P.; Gendotti, U.; Rubbia, A.

    2010-04-01

    We have installed in Saclay a facility for an intense positron source in November 2008. It is based on a compact 5.5 MeV electron linac connected to a reaction chamber with a tungsten target inside to produce positrons via pair production. The expected production rate for fast positrons is 5·1011 per second. The study of moderation of fast positrons and the construction of a slow positron trap are underway. In parallel, we have investigated an efficient positron-positronium convertor using porous silica materials. These studies are parts of a project to produce positively charged antihydrogen ions aiming to demonstrate the feasibility of a free fall antigravity measurement of neutral antihydrogen.

  6. Dynamical Evidence for a Late Formation of Saturn's Moons

    CERN Document Server

    Ćuk, Matija; Nesvorný, David

    2016-01-01

    We explore the past evolution of Saturn's moons using direct numerical integrations. We find that the past Tethys-Dione 3:2 orbital resonance predicted in standard models likely did not occur, implying that the system is less evolved than previously thought. On the other hand, the orbital inclinations of Tethys, Dione and Rhea suggest that the system did cross the Dione-Rhea 5:3 resonance, which is closely followed by a Tethys-Dione secular resonance. A clear implication is that either the moons are significantly younger than the planet, or that their tidal evolution must be extremely slow (Q > 80,000). As an extremely slow-evolving system is incompatible with intense tidal heating of Enceladus, we conclude that the moons interior to Titan are not primordial, and we present a plausible scenario for the system's recent formation. We propose that the mid-sized moons re-accreted from a disk about 100 Myr ago, during which time Titan acquired its significant orbital eccentricity. We speculate that this disk has f...

  7. The dynamics of protein body formation in developing wheat grain.

    Science.gov (United States)

    Moore, Katie L; Tosi, Paola; Palmer, Richard; Hawkesford, Malcolm J; Grovenor, Chris R M; Shewry, Peter R

    2016-09-01

    Wheat is a major source of protein in the diets of humans and livestock but we know little about the mechanisms that determine the patterns of protein synthesis in the developing endosperm. We have used a combination of enrichment with (15) N glutamine and NanoSIMS imaging to establish that the substrate required for protein synthesis is transported radially from its point of entrance in the endosperm cavity across the starchy endosperm tissues, before becoming concentrated in the cells immediately below the aleurone layer. This transport occurs continuously during grain development but may be slower in the later stages. Although older starchy endosperm cells tend to contain larger protein deposits formed by the fusion of small protein bodies, small highly enriched protein bodies may also be present in the same cells. This shows a continuous process of protein body initiation, in both older and younger starchy endosperm cells and in all regions of the tissue. Immunolabeling with specific antibodies shows that the patterns of enrichment are not related to the contents of gluten proteins in the protein bodies. In addition to providing new information on the dynamics of protein deposition, the study demonstrates the wider utility of NanoSIMS and isotope labelling for studying complex developmental processes in plant tissues. PMID:26898533

  8. Dynamics and structure formation in thin polymer melt films

    International Nuclear Information System (INIS)

    The stability of thin liquid coatings plays a fundamental role in everyday life. We studied the stability conditions of thin (3 to 300 nm) liquid polymer films on various substrates. The key role is played by the effective interface potential φ of the system air/film/substrate, which determines the dewetting scenario in case the film is not stable. We describe in this study how to distinguish a spinodal dewetting scenario from heterogeneous and homogeneous dewetting by analysing the emerging structures of the film surface by e.g. Minkowski measures. We also include line tension studies of tiny droplets, showing that the long-range part of φ does affect the drop profile, but only very close to the three phase boundary line. The dynamic properties of the films are characterized via various experimental methods: the form of the dewetting front, for example, was recorded by scanning probe microscopy and gives insight into the boundary condition between the liquid and the substrate. We further report experiments probing the viscosity and the glass transition temperature of nm-thick films using e.g. ellipsometry. Here we find that even short-chained polymer melts exhibit a significant reduction of the glass transition temperature as the film thickness is reduced below 100 nm

  9. Dynamical simulation of disoriented chiral condensate formation in Bjorken rods

    International Nuclear Information System (INIS)

    Using a semiclassical treatment of the linear σ model, we simulate the dynamical evolution of an initially hot cylindrical rod endowed with a longitudinal Bjorken scaling expansion (a ''Bjorken rod''). The field equation is propagated until full decoupling has occurred and the asymptotic many-body state of free pions is then obtained by a suitable Fourier decomposition of the field and a subsequent stochastic determination of the number of quanta in each elementary mode. The resulting transverse pion spectrum exhibits visible enhancements below 200 MeV due to the parametric amplification caused by the oscillatory relaxation of the chiral order parameter. Ensembles of such final states are subjected to various event-by-event analyses. The factorial moments of the multiplicity distribution suggest that the soft pions are nonstatistical. Furthermore, their emission patterns exhibit azimuthal correlations that have a bearing on the domain size in the source. Finally, the distribution of the neutral pion fraction shows a significant broadening for the soft pions which grows steadily as the number of azimuthal segments is increased. All of these features are indicative of disoriented chiral condensates and it may be interesting to apply similar analyses to actual data from high-energy nuclear collision experiments. (c) 2000 The American Physical Society

  10. Quenching of $para$-H$_2$ with an ultra-cold anti-hydrogen atom $\\bar{H}_{1s}$

    OpenAIRE

    Sultanov, Renat A.; Adhikari, Sadhan K.; Guster, Dennis

    2009-01-01

    In this work we report the results concerning calculations for quantum-mechanical rotational transitions in molecular hydrogen, H$_2$, induced by an ultra-cold ground state anti-hydrogen atom $\\bar{H}_{1s}$. The calculations are accomplished using a non-reactive close-coupling quantum-mechanical approach. The H$_2$ molecule is treated as a rigid rotor. The total elastic scattering cross section $\\sigma_{el}(\\epsilon)$ at energy $\\epsilon$, state-resolved rotational transition cross sections $...

  11. Particle concentration and flux dynamics in the atmospheric boundary layer as the indicator of formation mechanism

    Directory of Open Access Journals (Sweden)

    J. Lauros

    2010-08-01

    Full Text Available We carried out column model simulations to study particle fluxes and deposition and to evaluate different particle formation mechanisms at a boreal forest site in Finland. We show that kinetic nucleation of sulphuric acid cannot be responsible for new particle formation alone as the vertical profile of particle number distribution does not correspond to observations. Instead organic induced nucleation leads to good agreement confirming the relevance of the aerosol formation mechanism including organic compounds emitted by biosphere.

    Simulation of aerosol concentration inside the atmospheric boundary layer during nucleation days shows highly dynamical picture, where particle formation is coupled with chemistry and turbulent transport. We have demonstrated suitability of our turbulent mixing scheme in reproducing most important characteristics of particle dynamics inside the atmospheric boundary layer. Deposition and particle flux simulations show that deposition affects noticeably only the smallest particles at the lowest part of the atmospheric boundary layer.

  12. Dynamic Star Formation in the Massive DR21 Filament

    Energy Technology Data Exchange (ETDEWEB)

    Schneider, N.; /Saclay; Csengeri, T.; /Saclay; Bontemps, S.; /OASU, Floirac; Motte, F.; /Saclay; Simon, R.; /Cologne U.; Hennebelle, P.; /Paris Observ.; Federrath, C.; /ZAH, Heidelberg; Klessen, R.; /ZAH, Heidelberg /KIPAC, Menlo Park

    2010-08-25

    The formation of massive stars is a highly complex process in which it is unclear whether the star-forming gas is in global gravitational collapse or an equilibrium state supported by turbulence and/or magnetic fields. By studying one of the most massive and dense star-forming regions in the Galaxy at a distance of less than 3 kpc, i.e. the filament containing the well-known sources DR21 and DR21(OH), we attempt to obtain observational evidence to help us to discriminate between these two views. We use molecular line data from our {sup 13}CO 1 {yields} 0, CS 2 {yields} 1, and N{sub 2}H{sup +} 1 {yields} 0 survey of the Cygnus X region obtained with the FCRAO and CO, CS, HCO{sup +}, N{sub 2}H{sup +}, and H{sub 2}CO data obtained with the IRAM 30m telescope. We observe a complex velocity field and velocity dispersion in the DR21 filament in which regions of the highest column-density, i.e., dense cores, have a lower velocity dispersion than the surrounding gas and velocity gradients that are not (only) due to rotation. Infall signatures in optically thick line profiles of HCO{sup +} and {sup 12}CO are observed along and across the whole DR21 filament. By modelling the observed spectra, we obtain a typical infall speed of {approx}0.6 km s{sup -1} and mass accretion rates of the order of a few 10{sup -3} M{sub {circle_dot}} yr{sup -1} for the two main clumps constituting the filament. These massive clumps (4900 and 3300 M{sub {circle_dot}} at densities of around 10{sup 5} cm{sup -3} within 1 pc diameter) are both gravitationally contracting. The more massive of the clumps, DR21(OH), is connected to a sub-filament, apparently 'falling' onto the clump. This filament runs parallel to the magnetic field. Conclusions. All observed kinematic features in the DR21 filament (velocity field, velocity dispersion, and infall), its filamentary morphology, and the existence of (a) sub-filament(s) can be explained if the DR21 filament was formed by the convergence of flows

  13. Process Dynamics and Fractal Analysis of New Phase Formation in Thermal Processes

    Institute of Scientific and Technical Information of China (English)

    Wang J; Shen Z.W; Shen Z. Q

    2001-01-01

    Boiling and fouling are taken as typical examples of new phase formation process to be analyzed and discussed in this paper. The process dynamics of nucleate boiling is analyzed and its mechanism is discussed from the view point of self-organization. Fouling, which is a more complicated phenomenon of new phase formation, involves series of underlying processes. The morphology and fractal analysis of fouling on low-energy surface and that with fouling inhibitors are studied and discussed. It is suggested that considering the process dynamics, fractal analysis and self-organization, a new avenue of research should be found.

  14. Traveling waves and dynamical formation of autonomous pacemakers in a bistable medium with periodic boundary conditions

    Science.gov (United States)

    Shepelev, Igor A.; Vadivasova, Tatiana E.; Postnov, Dmitry E.

    2015-03-01

    The problem of spatiotemporal pattern formation in the wall of arterial vesselsmay be reduced to 1D or 2D models of nonlinear active medium. We address this problem using the discrete array of non-oscillating (bistable) active units. We show how the specific choice of initial conditions in a 1D model with periodic boundary conditions triggers the self-sustained behaviour. We reveal the core of observed effects being the dynamical formation of localized (few-element size) autonomous pacemakers.

  15. Dynamical resonant electron capture in atom surface collisions: H- formation in H-Al(111) collisions

    Science.gov (United States)

    Borisov, A. G.; Teillet-Billy, D.; Gauyacq, J. P.

    1992-05-01

    The formation of H- ion by grazing-angle collisions of hydrogen on an Al(111) surface is investigated with the newly developed coupled angular mode method. The capture process involves a dynamical resonant process induced by the collision velocity. All the resonance properties of the H- level in front of an Al(111) surface are determined: position, width, and angular distribution of ejected electrons. The results are shown to account for the recent observations on H- formation by Wyputta, Zimny, and Winter.

  16. A Fuzzy Programming approach for formation of Virtual Cells under dynamic and uncertain conditions

    OpenAIRE

    R.Jayachitra,; A.Revathy; P.S.S.Prasad

    2010-01-01

    Inspired by principles and advantages of the group technology (GT) philosophy, part family formation for a virtual Cellular Manufacturing System (VCMS) using Fuzzy logic is designed for dynamic and uncertain conditions. In real manufacturing systems, the input parameters such as part demand and the capacity are fuzzy in nature. In such cases, the fluctuations in part demand and the availability of manufacturing facilities in each period can be regarded as fuzzy. In a dynamic environment, the ...

  17. Understanding visual map formation through vortex dynamics of spin Hamiltonian models

    CERN Document Server

    Cho, M W; Cho, Myoung Won; Kim, Seunghwan

    2003-01-01

    We introduce a general method for cerebral cortical map generation and apply it to pattern formation in orientation and ocular dominance columns of the brain. From a known cortical structure, we build spin Hamiltonian models with long-range interactions of the Mexican hat type. These Hamiltonian models allow a coherent interpretation of the diverse phenomena in the map formation in the visual cortex with the help of relaxation dynamics of spins. In particular, we predict various phenomena of self-organization in orientation and ocular map formation including the pinwheel annihilation and its dependency on the columnar wave vector and boundary conditions.

  18. Star Formation and Gas Dynamics in Galactic Disks: Physical Processes and Numerical Models

    CERN Document Server

    Ostriker, Eve C

    2010-01-01

    Star formation depends on the available gaseous "fuel" as well as galactic environment, with higher specific star formation rates where gas is predominantly molecular and where stellar (and dark matter) densities are higher. The partition of gas into different thermal components must itself depend on the star formation rate, since a steady state distribution requires a balance between heating (largely from stellar UV for the atomic component) and cooling. In this presentation, I discuss a simple thermal and dynamical equilibrium model for the star formation rate in disk galaxies, where the basic inputs are the total surface density of gas and the volume density of stars and dark matter, averaged over ~kpc scales. Galactic environment is important because the vertical gravity of the stars and dark matter compress gas toward the midplane, helping to establish the pressure, and hence the cooling rate. In equilibrium, the star formation rate must evolve until the gas heating rate is high enough to balance this co...

  19. Designing a Robust Nonlinear Dynamic Inversion Controller for Spacecraft Formation Flying

    Directory of Open Access Journals (Sweden)

    Inseok Yang

    2014-01-01

    Full Text Available The robust nonlinear dynamic inversion (RNDI control technique is proposed to keep the relative position of spacecrafts while formation flying. The proposed RNDI control method is based on nonlinear dynamic inversion (NDI. NDI is nonlinear control method that replaces the original dynamics into the user-selected desired dynamics. Because NDI removes nonlinearities in the model by inverting the original dynamics directly, it also eliminates the need of designing suitable controllers for each equilibrium point; that is, NDI works as self-scheduled controller. Removing the original model also provides advantages of ease to satisfy the specific requirements by simply handling desired dynamics. Therefore, NDI is simple and has many similarities to classical control. In real applications, however, it is difficult to achieve perfect cancellation of the original dynamics due to uncertainties that lead to performance degradation and even make the system unstable. This paper proposes robustness assurance method for NDI. The proposed RNDI is designed by combining NDI and sliding mode control (SMC. SMC is inherently robust using high-speed switching inputs. This paper verifies similarities of NDI and SMC, firstly. And then RNDI control method is proposed. The performance of the proposed method is evaluated by simulations applied to spacecraft formation flying problem.

  20. Enantioselective Formation of a Dynamic Hydrogen-Bonded Assembly Based on the Chiral Memory Concept

    NARCIS (Netherlands)

    Ishi-i, Tsutomu; Crego Calama, Mercedes; Timmerman, Peter; Reinhoudt, David N.; Shinkai, Seiji

    2002-01-01

    In this paper, we report the enantioselective formation of a dynamic noncovalent double rosette assembly 1a3·(CYA)6 composed of three 2-pyridylcalix[4]arene dimelamines (1a) and six butylcyanuric acid molecules (BuCYA). The six 2-pyridyl functionalities of the assembly interact stereoselectively wit

  1. Dynamics of formation of particles of the condensed carbon phase at shock compression of organic materials

    CERN Document Server

    Fedotov, M G; Luckjanchikov, L A; Lyakhov, N Z; Sharafutdinov, M R; Sheromov, M A; Ten, K A; Titov, V M; Tolochko, B P; Zubkov, P I

    2001-01-01

    Results of the SR study of the density behavior and dynamics of formation of condensed carbon particles at expansion of shock waves in organic materials and some low-sensitive explosives as well as at shock loading of ultra-dispersed diamonds are presented. Appearance of particles of the condensed carbon phase was observed in carbon-rich organic materials.

  2. Phase 1 user instruction manual. A geological formation - drill string dynamic interaction finite element program (GEODYN)

    Energy Technology Data Exchange (ETDEWEB)

    Tinianow, M.A.; Rotelli, R.L. Jr.; Baird, J.A.

    1984-06-01

    User instructions for the GEODYN Interactive Finite Element Computer Program are presented. The program is capable of performing the analysis of the three-dimensional transient dynamic response of a Polycrystalline Diamond Compact Bit - Bit Sub arising from the intermittent contact of the bit with the downhole rock formations. The program accommodates non-linear, time dependent, loading and boundary conditions.

  3. The Romulus Cosmological Simulations: A Physical Approach to the Formation, Dynamics and Accretion Models of SMBHs

    CERN Document Server

    Tremmel, Michael; Governato, Fabio; Volonteri, Marta; Quinn, Tom; Pontzen, Andrew; Anderson, Lauren

    2016-01-01

    We present a novel implementation of supermassive black hole (SMBH) formation, dynamics, and accretion in the massively parallel tree+SPH code, ChaNGa. This approach improves the modeling of SMBHs in fully cosmological simulations, allowing for a more detailed analysis of SMBH-galaxy co-evolution throughout cosmic time. Our scheme includes novel, physically motivated models for SMBH formation, dynamics and sinking timescales within galaxies, and SMBH accretion of rotationally supported gas. The sub-grid parameters that regulate star formation (SF) and feedback from SMBHs and SNe are optimized against a comprehensive set of z = 0 galaxy scaling relations using a novel, multi-dimensional parameter search. We have incorporated our new SMBH implementation and parameter optimization onto a new set of high resolution, large-scale cosmological simulations called Romulus. We present initial results from our flagship simulation, Romulus25, showing that our SMBH model results in SF efficiency, SMBH masses, and global c...

  4. Hierarchical Formation of Galaxies with Dynamical Response to Supernova-Induced Gas removal

    CERN Document Server

    Nagashima, M

    2004-01-01

    We reanalyze the formation and evolution of galaxies in the hierarchical clustering scenario. Using a semi-analytic model (SAM) of galaxy formation described in this paper, which we hereafter call the Mitaka model, we extensively investigate the observed scaling relations of galaxies among photometric, kinematic, structural and chemical characteristics. In such a scenario, spheroidal galaxies are assumed to be formed by major merger and subsequent starburst, in contrast to the traditional scenario of monolithic cloud collapse. As a new ingredient of SAMs, we introduce the effects of dynamical response to supernova-induced gas removal on size and velocity dispersion, which play an important role on dwarf galaxy formation. In previous theoretical studies of dwarf galaxies based on the monolithic cloud collapse given by Yoshii & Arimoto and Dekel & Silk, the dynamical response was treated in the extremes of a purely baryonic cloud and a baryonic cloud fully supported by surrounding dark matter. To improv...

  5. Bifurcation and spatial pattern formation in spreading of disease with incubation period in a phytoplankton dynamics

    Directory of Open Access Journals (Sweden)

    Randhir Singh Baghel

    2012-02-01

    Full Text Available In this article, we propose a three dimensional mathematical model of phytoplankton dynamics with the help of reaction-diffusion equations that studies the bifurcation and pattern formation mechanism. We provide an analytical explanation for understanding phytoplankton dynamics with three population classes: susceptible, incubated, and infected. This model has a Holling type II response function for the population transformation from susceptible to incubated class in an aquatic ecosystem. Our main goal is to provide a qualitative analysis of Hopf bifurcation mechanisms, taking death rate of infected phytoplankton as bifurcation parameter, and to study further spatial patterns formation due to spatial diffusion. Here analytical findings are supported by the results of numerical experiments. It is observed that the coexistence of all classes of population depends on the rate of diffusion. Also we obtained the time evaluation pattern formation of the spatial system.

  6. Formation dynamics of FeN thin films on Cu(100)

    KAUST Repository

    Heryadi, Dodi

    2012-01-01

    To investigate the structural and magnetic properties of thin films of FeN we have performed ab initio molecular dynamics simulations of their formation on Cu(100) substrates. The iron nitride layers exhibit a p4gm(2 × 2) reconstruction and order ferromagnetically in agreement with experiment. We establish the dynamics and time scale of the film formation as a function of the film thickness. The process is split in two phases: formation of almost flat FeN layers and optimization of the distance to the substrate. Our calculated magnetic moments are 1.67 μ B, 2.14 μ B, and 2.21 μ B for one, two, and three monolayers of iron nitride. © 2011 Elsevier B.V. All rights reserved.

  7. DYNAMICAL FORMATION OF CAVITY FOR COMPOSED THERMAL HYPERELASTIC SPHERES IN NON-UNIFORM TEMPERATURE FIELDS

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    Dynamical formation and growth of cavity in a sphere composed of two incompressible thermal-hyperelastic Gent-Thomas materials were discussed under the case of a non-uniform temperature field and the surface dead loading. The mathematical model was first presented based on the dynamical theory of finite deformations. An exact differential relation between the void radius and surface load was obtained by using the variable transformation method. By numerical computation, critical loads and cavitation growth curves were obtained for different temperatures. The influence of the temperature and material parameters of the composed sphere on the void formation and growth was considered and compared with those for static analysis. The results show that the cavity occurs suddenly with a finite radius and its evolvement with time displays a non-linear periodic vibration and that the critical load decreases with the increase of temperature and also the dynamical critical load is lower than the static critical load under the same conditions.

  8. The Impact of Polymer Dynamics on Photoinduced Carrier Formation in Films of Semiconducting Polymers.

    Science.gov (United States)

    Ogata, Yudai; Kawaguchi, Daisuke; Tanaka, Keiji

    2015-12-01

    A better understanding of the carrier formation process in photosemiconducting polymers is crucial to design and construct highly functionalized thin film organic photodevices. Almost all studies published focus on the effect of structure on the photoinduced carrier formation process. Here, we study the dynamics of polymer chain impacts on the carrier formation process for a series of poly(3-alkylthiophene)s (P3ATs) with different alkyl side-chain lengths. The formation of polarons (P) from polaron pairs (PP) was accelerated at a temperature at which the twisting motion of thiophene rings occurs. Among all P3ATs employed, in P3AT with hexyl groups, or poly(3-hexylthiophene) (P3HT), it was easiest to twist the thiophene rings and generate P from PP. The activation energy for P formation was proportional to that of thiophene ring motion. This makes it clear that chain dynamics, in addition to the crystalline structure, is a controlling factor for the carrier formation process in photosemiconducting polymers. PMID:26574654

  9. Formation Dynamics and Quantitative Prediction of Hydrocarbons of the Superpressure System in the Dongying Sag

    Institute of Scientific and Technical Information of China (English)

    SUI Fenggui; HAO Xuefeng; LIU Qing; ZHUO Qingong; ZHANG Shouchun

    2008-01-01

    Based on the theory of formation dynamics of oil/gas pools, the Dongying sag can be divided into three dynamic systems regarding the accumulation of oil and gas: the superpressure closed system,the semi-closed system and the normal pressure open system. Based on the analysis of genesis of superpressure in the superpressure closed system and the rule of hydrocarbon expulsion,it is found that hydrocarbon generation is related to superpressure, which is the main driving factor of hydrocarbon migration. Micro fractures formed by superpressure are the main channels for hydrocarbon migration. There are three dynamic patterns for hydrocarbon expulsion: free water drainage, hydrocarbon accumulation and drainage through micro fissures. In the superpressure closed system, the oil-driving-water process and oil/gas accumulation were completed in lithologic traps by way of such two dynamic patterns as episodic evolution of superpressure systems and episodic pressure release of faults. The oil-bearing capacity of lithologic traps is intimately related to reservoir-forming dynamic force. Quantitative evaluation of dynamic conditions for pool formation can effectively predict the oil-bearing capability of traps.

  10. Professor Walter Oelert, leader of the team which created the first atoms of antihydrogen at the Low Energy Antiproton Ring (LEAR) in January 1996

    CERN Multimedia

    Laurent Guiraud

    1996-01-01

    Antiparticles were predicted in the work of Paul Dirac in the 1920's, since when physicists have identified all the necessary antiparticle constituents of an antiparticle atom - antielectrons (positrons), antiprotons and antineutrons. However, an antihydrogen atom wasn't produced until the PS210 experiment at CERN in 1995. PS210 used the LEAR accelerator, which was then nearing the end of its lifetime, so everything in the experiment had to work first time. After installing the equipment in spring 1995, the experiment took place in the autumn, in two hour periods over 4 weeks. The experiment team collided energetic antiprotons from LEAR with a heavy element, a challenge for them as well as the LEAR operators. Proving that antihydrogen atoms had been formed required several more weeks of data analysis, but the announcement that nine antihydrogen atoms had been produced came on 4 January 1996.

  11. Formation and dynamics of van der Waals molecules in buffer-gas traps

    CERN Document Server

    Brahms, Nathan; Zhang, Peng; Kłos, Jacek; Forrey, Robert C; Au, Yat Shan; Sadeghpour, H R; Dalgarno, A; Doyle, John M; Walker, Thad G

    2011-01-01

    We show that weakly bound He-containing van der Waals molecules can be produced and magnetically trapped in buffer-gas cooling experiments, and provide a general model for the formation and dynamics of these molecules. Our analysis shows that, at typical experimental parameters, thermodynamics favors the formation of van der Waals complexes composed of a helium atom bound to most open-shell atoms and molecules, and that complex formation occurs quickly enough to ensure chemical equilibrium. For molecular pairs composed of a He atom and an S-state atom, the molecular spin is stable during formation, dissociation, and collisions, and thus these molecules can be magnetically trapped. Collisional spin relaxations are too slow to affect trap lifetimes. However, helium-3-containing complexes can change spin due to adiabatic crossings between trapped and untrapped Zeeman states, mediated by the anisotropic hyperfine interaction, causing trap loss. We provide a detailed model for Ag3He molecules, using ab initio calc...

  12. Population synthesis of planet formation using a torque formula with dynamic effects

    CERN Document Server

    Sasaki, Takanori

    2016-01-01

    Population synthesis studies into planet formation have suggested that distributions consistent with observations can only be reproduced if the actual Type I migration timescale is at least an order of magnitude longer than that deduced from linear theories. Although past studies considered the effect of the Type I migration of protoplanetary embryos, in most cases they used a conventional formula based on static torques in isothermal disks, and employed a reduction factor to account for uncertainty in the mechanism details. However, in addition to static torques, a migrating planet experiences dynamic torques that are proportional to the migration rate. These dynamic torques can impact on planet migration and predicted planetary populations. In this study, we derived a new torque formula for Type I migration by taking into account dynamic corrections. This formula was used to perform population synthesis simulations with and without the effect of dynamic torques. In many cases, inward migration was slowed si...

  13. Construction and Operational Experience with a Superconducting Octupole Used to Trap Antihydrogen

    Energy Technology Data Exchange (ETDEWEB)

    Wanderer P.; Escallier, J.; Marone, A.; Parker, B.

    2011-09-06

    A superconducting octupole magnet has seen extensive service as part of the ALPHA experiment at CERN. ALPHA has trapped antihydrogen, a crucial step towards performing precision measurements of anti-atoms. The octupole was made at the Direct Wind facility by the Superconducting Magnet Division at Brookhaven National Laboratory. The magnet was wound with a six-around-one NbTi cable about 1 mm in diameter. It is about 300 mm long, with a radius of 25 mm and a peak field at the conductor of 4.04 T. Specific features of the magnet, including a minimal amount of material in the coil and coil ends with low multipole content, were advantageous to its use in ALPHA. The magnet was operated for six months a year for five years. During this time it underwent about 900 thermal cycles (between 4K and 100K). A novel operational feature is that during the course of data-taking the magnet was repeatedly shut off from its 950 A operating current. The magnet quenches during the shutoff, with a decay constant of 9 ms. Over the course of the five years, the magnet was deliberately quenched many thousands of times. It still performs well.

  14. Dynamics of nanoparticle-protein corona complex formation: analytical results from population balance equations.

    Directory of Open Access Journals (Sweden)

    Faryad Darabi Sahneh

    Full Text Available BACKGROUND: Nanoparticle-protein corona complex formation involves absorption of protein molecules onto nanoparticle surfaces in a physiological environment. Understanding the corona formation process is crucial in predicting nanoparticle behavior in biological systems, including applications of nanotoxicology and development of nano drug delivery platforms. METHOD: This paper extends the modeling work in to derive a mathematical model describing the dynamics of nanoparticle corona complex formation from population balance equations. We apply nonlinear dynamics techniques to derive analytical results for the composition of nanoparticle-protein corona complex, and validate our results through numerical simulations. RESULTS: The model presented in this paper exhibits two phases of corona complex dynamics. In the first phase, proteins rapidly bind to the free surface of nanoparticles, leading to a metastable composition. During the second phase, continuous association and dissociation of protein molecules with nanoparticles slowly changes the composition of the corona complex. Given sufficient time, composition of the corona complex reaches an equilibrium state of stable composition. We find analytical approximate formulae for metastable and stable compositions of corona complex. Our formulae are very well-structured to clearly identify important parameters determining corona composition. CONCLUSION: The dynamics of biocorona formation constitute vital aspect of interactions between nanoparticles and living organisms. Our results further understanding of these dynamics through quantitation of experimental conditions, modeling results for in vitro systems to better predict behavior for in vivo systems. One potential application would involve a single cell culture medium related to a complex protein medium, such as blood or tissue fluid.

  15. Dislocation dynamics. II. Applications to the formation of persistent slip bands, planar arrays, and dislocation cells

    International Nuclear Information System (INIS)

    The dynamic organization of dislocations into spatially heterogeneous substructures is demonstrated by applying the principles of dislocation dynamics that were outlined in the preceding paper. Here it is shown that the formation of persistent slip bands is a consequence of the competition between dipole formation and annihilation of dislocations of opposite Burgers vectors in the absence of temperature-enhanced climb recovery under cyclic stress conditions. Planar arrays, which are also uniaxial structures, are shown to arise from enhanced dislocation multiplication and the formation of stable dipole configurations along a slip plane at lower temperatures where climb is unimportant. Biaxial dislocation systems experience additional degrees of freedom compared with uniaxial systems because of available motion along additional slip systems. It is demonstrated that for a system of orthogonal slip directions at high temperatures in which climb and glide motion are competitive, dislocation cellular structures form as a result of immobile dipole and junction formation and by the internal elastic strain energy minimization caused by long-range self-shielding. It is shown that the internal elastic strain energy is reduced by the self-organization process. However, the short-range nonlinear processes (i.e., dipole and junction formation) are shown not to allow absolute elastic energy minimization

  16. Gas dynamic effects on formation of carbon dimers in laser-produced plasmas

    Science.gov (United States)

    Al-Shboul, K. F.; Harilal, S. S.; Hassanein, A.

    2011-09-01

    We investigated the effect of helium and nitrogen pressures on the dynamics of molecular species formation during laser ablation of carbon. For producing plasmas, planar carbon targets were irradiated with 1064 nm, 6 ns pulses from an Nd:yttrium aluminum garnet laser. The emission from excited C2 and CN molecules was studied using space resolved optical time-of-flight emission spectroscopy and spectrally resolved fast imaging. The intensity oscillations in C2 and CN monochromatic fast imaging and their emission space-time contours suggest that recombination is the major mechanism of C2 formation within the laser ablation carbon plumes in the presence of ambient gas.

  17. Contribution of the Atmospheric Dynamics to the Sporadic Sodium Layer Formation

    Institute of Scientific and Technical Information of China (English)

    杨国韬; 王嘉珉; 刘炳模; 程学武; 万卫星; 龚顺生

    2002-01-01

    We report on a sporadic sodium layer (SSL) event observed by our Na fluorescence lidar at Wuhan, China (31°N, 114°E) on 16 March 1999, and we reveal some special behaviour. From careful analysis of various sodium content variations of the layer during the development of this SSL event, it is found that besides the sodium injection mechanism as expected, another mechanism which we call atmospheric dynamics also made a noticeable contribution to this SSL formation. Computer simulations confirmed that under the combined action ora suitable sodium injection and a bi-direction vertical wind field, an SSL profile can be reproduced with a pronounced SSL peak on a normal sodium layer, as we observed in this event. From these results, it is emphasized that atmospheric dynamics is important for SSL formation.

  18. Dynamical entanglement formation and dissipation effects in two double quantum dots

    Energy Technology Data Exchange (ETDEWEB)

    Contreras-Pulido, L D [Centro de Investigacion CientIfica y de Educacion Superior de Ensenada, Apartado Postal 2732, Ensenada, BC 22860 (Mexico); Rojas, F [Departamento de Fisica Teorica, Centro de Ciencias de la Materia Condensada, Universidad Nacional Autonoma de Mexico, Ensenada, Baja California 22800 (Mexico)

    2006-11-01

    We study the static and dynamic formation of entanglement in charge states of a two double quantum dot array with two mobile electrons under the effect of an external driving field. We include dissipation via contact with a phonon bath. By using the density matrix formalism and an open quantum system approach, we describe the dynamical behaviour of the charge distribution (polarization), concurrence (measure of the degree of entanglement) and Bell state probabilities (two qubit states with maximum entanglement) of such a system, including the role of dot asymmetry and temperature effects. Our results show that it is possible to obtain entangled states as well as a most probable Bell state, which can be controlled by the driving field. We also evaluate how the entanglement formation based on charge states deteriorates as the temperature or asymmetry increases.

  19. DYNAMICAL FORMATION OF CAVITY IN TRANSVERSELY ISOTROPIC HYPER-ELASTIC SPHERES

    Institute of Scientific and Technical Information of China (English)

    任九生; 程昌钧

    2003-01-01

    The cavity formation in a radial transversely isotropic hyper-elastic sphere of an incompressible Ogden material, subjected to a suddenly applied uniform radial tensile boundary deadload, is studied following the theory of finite deformation dynamics. A cavity forms at the center of the sphere when the tensile load is greater than its critical value. It is proved that the evolution of the cavity radius with time follows that of nonlinear periodic oscillations.

  20. Changing Dynamics of Cross-Border Intimate Partnership Formations in Scandinavia

    DEFF Research Database (Denmark)

    Singla, Rashmi

    Intimate partnership formations across the borders at various levels challenge stereotypes and lead to enhanced social diversity but are understudied in Scandinavia. Our workshop presents and discusses these phenomena through research, practice and policy issues from Denmark and Finland within...... interdisciplinary framework. It explores processes related to "us and them" redefinitions and minority-majority relations through focus on motivations,identity, life course,gender,family dynamics especially intergenerational conflicts, diaspora and policy effects.  ...

  1. The Last Stages of Terrestrial Planet Formation: Dynamical Friction and the Late Veneer

    OpenAIRE

    Schlichting, Hilke E.; Warren, Paul H.; Yin, Qing-Zhu

    2012-01-01

    The final stage of terrestrial planet formation consists of the clean-up of residual planetesimals after the giant impact phase. Dynamically, a residual planetesimal population is needed to damp the high eccentricities and inclinations of the terrestrial planets to circular and coplanar orbits after the giant impact stage. Geochemically, highly siderophile element (HSE) abundance patterns inferred for the terrestrial planets and the Moon suggest that a total of about 0.01 M_⊕ of chondritic ma...

  2. Formation and dynamics of van der Waals molecules in buffer-gas traps.

    Science.gov (United States)

    Brahms, Nathan; Tscherbul, Timur V; Zhang, Peng; Kłos, Jacek; Forrey, Robert C; Au, Yat Shan; Sadeghpour, H R; Dalgarno, A; Doyle, John M; Walker, Thad G

    2011-11-14

    We show that weakly bound He-containing van der Waals molecules can be produced and magnetically trapped in buffer-gas cooling experiments, and provide a general model for the formation and dynamics of these molecules. Our analysis shows that, at typical experimental parameters, thermodynamics favors the formation of van der Waals complexes composed of a helium atom bound to most open-shell atoms and molecules, and that complex formation occurs quickly enough to ensure chemical equilibrium. For molecular pairs composed of a He atom and an S-state atom, the molecular spin is stable during formation, dissociation, and collisions, and thus these molecules can be magnetically trapped. Collisional spin relaxation is too slow to affect trap lifetimes. However, (3)He-containing complexes can change spin due to adiabatic crossings between trapped and untrapped Zeeman states, mediated by the anisotropic hyperfine interaction, causing trap loss. We provide a detailed model for Ag(3)He molecules, using ab initio calculation of Ag-He interaction potentials and spin interactions, quantum scattering theory, and direct Monte Carlo simulations to describe formation and spin relaxation in this system. The calculated rate of spin-change agrees quantitatively with experimental observations, providing indirect evidence for molecular formation in buffer-gas-cooled magnetic traps. Finally, we discuss the possibilities for spectroscopic detection of these complexes, including a calculation of expected spectra for Ag(3)He, and report on our spectroscopic search for Ag(3)He, which produced a null result.

  3. From collisions to clusters: first steps of sulphuric acid nanocluster formation dynamics

    Science.gov (United States)

    Loukonen, Ville; Bork, Nicolai; Vehkamäki, Hanna

    2014-08-01

    The clustering of sulphuric acid with base molecules is one of the main pathways of new-particle formation in the Earth's atmosphere. First step in the clustering process is likely the formation of a (sulphuric acid)1(base)1(water)n cluster. Here, we present results from direct first-principles molecular dynamics collision simulations of (sulphuric acid)1(water)0, 1 + (dimethylamine) → (sulphuric acid)1(dimethylamine)1(water)0, 1 cluster formation processes. The simulations indicate that the sticking factor in the collisions is unity: the interaction between the molecules is strong enough to overcome the possible initial non-optimal collision orientations. No post-collisional cluster break up is observed. The reasons for the efficient clustering are (i) the proton transfer reaction which takes place in each of the collision simulations and (ii) the subsequent competition over the proton control. As a consequence, the clusters show very dynamic ion pair structure, which differs from both the static structure optimisation calculations and the equilibrium first-principles molecular dynamics simulations. In some of the simulation runs, water mediates the proton transfer by acting as a proton bridge. In general, water is able to notably stabilise the formed clusters by allocating a fraction of the released clustering energy.

  4. Dynamic organization of actin cytoskeleton during the polarity formation and germination of pollen protoplasts

    Institute of Scientific and Technical Information of China (English)

    XU Xia; Zl Huijun; SUN Yina; REN Haiyun

    2004-01-01

    The formation of the polarity of pollen protoplast and the dynamics of actin cytoskeleton were observed by non-fixation, Alexa-Phalloidin probing and confocal laser scanning microscopy. Our results showed that the protoplast obtained from stored pollen contained numerous crystalline fusiform bodies to constitute a storage form of actin. When dormant pollen was hydrated, the actin cytoskeleton forms a fine network spreading uniformly in the protoplast. In the process of polarity formation and germination of pollen protoplast, actin filaments marshaled slowly to the brim, and then formed multilayer continuous actin filament bundles surrounding the cortical of the protoplast. When the protoplast was exposed to actin filament-disrupting drugs, such as Latrunculin A and Cytochalasin D, continuously arranged actin bundles were disturbed and in this condition, the protoplast could not germinate. But when exposed to actin filament stabiling drug-phalliodin, the dynamics of actin filaments in the protoplasts behaved normally and the protoplasts could germinate normally. These results were also confirmed by the pharmacology experiments on pollen grains. And when Latrunculin A or Cytochalasin D was washed off, the ratio of pollen germination was resumed partly. All the results above show that the dynamic organization of the actin cytoskeleton are critical in the cell polarity formation and germination of pollen protoplast, and that the reorganization of actin cytoskeleton is mainly due to the rearrangement of actin filament arrays.

  5. On the dynamics of Liesegang-type pattern formation in a gaseous system

    Science.gov (United States)

    Ramírez-Álvarez, Elizeth; Montoya, Fernando; Buhse, Thomas; Rios-Herrera, Wady; Torres-Guzmán, José; Rivera, Marco; Martínez-Mekler, Gustavo; Müller, Markus F.

    2016-01-01

    Liesegang pattern formations are widely spread in nature. In spite of a comparably simple experimental setup under laboratory conditions, a variety of spatio-temporal structures may arise. Presumably because of easier control of the experimental conditions, Liesegang pattern formation was mainly studied in gel systems during more than a century. Here we consider pattern formation in a gas phase, where beautiful but highly complex reaction-diffusion-convection dynamics are uncovered by means of a specific laser technique. A quantitative analysis reveals that two different, apparently independent processes, both highly correlated and synchronized across the extension of the reaction cloud, act on different time scales. Each of them imprints a different structure of salt precipitation at the tube walls. PMID:27025405

  6. Dynamics of biofilm formation in a model drinking water distribution system

    DEFF Research Database (Denmark)

    Boe-Hansen, Rasmus; Albrechtsen, Hans-Jørgen; Arvin, Erik;

    2002-01-01

    The dynamics of biofilm formation in non-chlorinated groundwater-based drinking water was studied in a model distribution system. The formation of biofilm was closely monitored for a period of 522 days by total bacterial counts (AODC), heterotrophic plate counts (R2A media), and ATP content...... determinations. The biofilm grew at a rate of 0.030±0.002 day−1 reaching quasi-stationary state at 2.6×106 cells/cm2 after approximately 200 days. The low substrate level in the bulk phase (AOC at approximately 6 g ac-C/l) most likely caused the relatively slow biofilm formation rate observed. During...... the maturation of the biofilm, the bacterial community changed properties in terms of cell-specific ATP content and culturability of the bacteria....

  7. Cofilin-mediated actin dynamics promotes actin bundle formation during Drosophila bristle development.

    Science.gov (United States)

    Wu, Jing; Wang, Heng; Guo, Xuan; Chen, Jiong

    2016-08-15

    The actin bundle is an array of linear actin filaments cross-linked by actin-bundling proteins, but its assembly and dynamics are not as well understood as those of the branched actin network. Here we used the Drosophila bristle as a model system to study actin bundle formation. We found that cofilin, a major actin disassembly factor of the branched actin network, promotes the formation and positioning of actin bundles in the developing bristles. Loss of function of cofilin or AIP1, a cofactor of cofilin, each resulted in increased F-actin levels and severe defects in actin bundle organization, with the defects from cofilin deficiency being more severe. Further analyses revealed that cofilin likely regulates actin bundle formation and positioning by the following means. First, cofilin promotes a large G-actin pool both locally and globally, likely ensuring rapid actin polymerization for bundle initiation and growth. Second, cofilin limits the size of a nonbundled actin-myosin network to regulate the positioning of actin bundles. Third, cofilin prevents incorrect assembly of branched and myosin-associated actin filament into bundles. Together these results demonstrate that the interaction between the dynamic dendritic actin network and the assembling actin bundles is critical for actin bundle formation and needs to be closely regulated.

  8. Molecular dynamics simulation of deuterium trapping and bubble formation in tungsten

    International Nuclear Information System (INIS)

    Highlights: ► Deuterium tungsten interaction was simulated using classical molecular dynamic methods. ► Low energy deuterium atoms tend to affix to high temperature tungsten surface. ► Tungsten substrate temperature barely affects the low energy deuterium implantation depth. ► Deuterium bubble formation resulting from near surface super-saturation was predicted. -- Abstract: The interaction between plasma particles and tungsten as plasma facing material is one of the critical issues in successfully using tungsten in Tokamak reactors environment. The deuterium bombardment of monocrystalline tungsten was modeled by molecular dynamics simulation using LAMMPS code and Tersoff type interatomic potential. The deuterium trapping rate, implantation depth, and the stopping time in tungsten at several temperatures ranging from 600 to 2000 K bombarded by 5–100 eV deuterium atoms were simulated. Deuterium bubble formation at near tungsten surface was also studied. Irradiated monocrystalline tungsten became amorphous state prior to deuterium cluster formation, and gas bubbles were observed in the 600, 900, and 1200 K tungsten samples. The formation of gas bubbles were caused by the near surface deuterium super-saturation region and the subsequent plastic deformation induced by the local high gas pressure

  9. Dynamical Stability of Imaged Planetary Systems in Formation: Application to HL Tau

    CERN Document Server

    Tamayo, Daniel; Menou, Kristen; Rein, Hanno

    2015-01-01

    We present a general and simple framework for understanding the dynamical stability of planets embedded in a protoplanetary nebula over typical disk lifetimes, and provide estimates for the maximum allowable planetary masses. We collect these easily evaluated dynamical constraints into a workflow that can help guide the design and interpretation of new observational campaigns and numerical simulations of gap opening in such systems. We argue that the locations of resonances should be significantly shifted from integer period ratios in massive disks like HL Tau, and that theoretical uncertainties in the exact shift, together with observational errors, imply a large uncertainty in the dynamical state and stability in such disks. This renders our results largely insensitive to an improved determination of the gaps' orbital radii, and presents an important barrier to using systems like HL Tau as a proxy for the initial conditions following planet formation. An important observational avenue to breaking this degen...

  10. Finite element simulation of dynamic wetting flows as an interface formation process

    KAUST Repository

    Sprittles, J.E.

    2013-01-01

    A mathematically challenging model of dynamic wetting as a process of interface formation has been, for the first time, fully incorporated into a numerical code based on the finite element method and applied, as a test case, to the problem of capillary rise. The motivation for this work comes from the fact that, as discovered experimentally more than a decade ago, the key variable in dynamic wetting flows - the dynamic contact angle - depends not just on the velocity of the three-phase contact line but on the entire flow field/geometry. Hence, to describe this effect, it becomes necessary to use the mathematical model that has this dependence as its integral part. A new physical effect, termed the \\'hydrodynamic resist to dynamic wetting\\', is discovered where the influence of the capillary\\'s radius on the dynamic contact angle, and hence on the global flow, is computed. The capabilities of the numerical framework are then demonstrated by comparing the results to experiments on the unsteady capillary rise, where excellent agreement is obtained. Practical recommendations on the spatial resolution required by the numerical scheme for a given set of non-dimensional similarity parameters are provided, and a comparison to asymptotic results available in limiting cases confirms that the code is converging to the correct solution. The appendix gives a user-friendly step-by-step guide specifying the entire implementation and allowing the reader to easily reproduce all presented results, including the benchmark calculations. © 2012 Elsevier Inc.

  11. Resolving the HONO formation mechanism in the ionosphere via ab initio molecular dynamic simulations.

    Science.gov (United States)

    He, Rongxing; Li, Lei; Zhong, Jie; Zhu, Chongqin; Francisco, Joseph S; Zeng, Xiao Cheng

    2016-04-26

    Solar emission produces copious nitrosonium ions (NO(+)) in the D layer of the ionosphere, 60 to 90 km above the Earth's surface. NO(+) is believed to transfer its charge to water clusters in that region, leading to the formation of gaseous nitrous acid (HONO) and protonated water cluster. The dynamics of this reaction at the ionospheric temperature (200-220 K) and the associated mechanistic details are largely unknown. Using ab initio molecular dynamics (AIMD) simulations and transition-state search, key structures of the water hydrates-tetrahydrate NO(+)(H2O)4 and pentahydrate NO(+)(H2O)5-are identified and shown to be responsible for HONO formation in the ionosphere. The critical tetrahydrate NO(+)(H2O)4 exhibits a chain-like structure through which all of the lowest-energy isomers must go. However, most lowest-energy isomers of pentahydrate NO(+)(H2O)5 can be converted to the HONO-containing product, encountering very low barriers, via a chain-like or a three-armed, star-like structure. Although these structures are not the global minima, at 220 K, most lowest-energy NO(+)(H2O)4 and NO(+)(H2O)5 isomers tend to channel through these highly populated isomers toward HONO formation. PMID:27071120

  12. Dynamics of Hippocampal Protein Expression During Long-term Spatial Memory Formation.

    Science.gov (United States)

    Borovok, Natalia; Nesher, Elimelech; Levin, Yishai; Reichenstein, Michal; Pinhasov, Albert; Michaelevski, Izhak

    2016-02-01

    trafficking, enhancement of metabolic activity, and Wnt signaling pathway during the steep phase of memory formation; and (3) cytoskeleton organization proteins. Taken together, this study clearly demonstrates dynamic assembly and disassembly of protein-protein interaction networks depending on the stage of memory formation engrams. PMID:26598641

  13. Microscopical study of the formation of adiabatic shear bands in 4340 steel during dynamic loading

    Science.gov (United States)

    Boakye-Yiadom, Solomon; Bassim, Nabil; Khaliq Khan, Abdul

    2013-12-01

    In this study, optical microscopy, scanning electron microscopy, transmission electron microscopy, X-ray diffraction and electron probe microanalyser were used to analyse the changes in microstructure of AISI 4340 steel specimens caused by impact at high strain rates and large strains. The structures of the steel prior to dynamic deformation and after dynamic deformation were examined to understand on a microscale level, the mechanism of formation of adiabatic shear bands (ASBs). The study also includes the structural changes that occur during post-deformation annealing processes which may relate to understanding of the mechanism of formation of ASBs. Prior to deformation, the tempered steel specimens consisted of lenticular laths of α-ferrite with precipitated platelet and spherical M3C carbides. After impact, the structure inside the shear band was characterized by refined and recrystallized grains immersed in dense dislocation structures. In addition, residual carbide particles were observed inside the shear bands due to deformation induced carbide dissolution. Regions away from the shear bands developed 'knitted' dislocation walls, evolving gradually into sub-boundaries and highly misoriented grain boundaries at increasing strains, leading to grain refinement of the ferrite. After impact, annealing the shear bands at 350 °C resulted in an increase in hardness regardless of the heat treatment before impact, amount of deformation and the time of annealing. This is because of the occurrence of extensive reprecipitation of dissolved carbides that existed in the steel structure prior to deformation. It is concluded that dynamic recovery/recrystallization, development of dislocation structures and carbide dissolution all contribute simultaneously to the formation of ASBs in quench-hardened steels.

  14. Spacecraft Formation Control: Managing Line-of-Sight Drift Based on the Dynamics of Relative Motion

    Science.gov (United States)

    Luquette, Richard J.; Sammer. Robert M.

    2008-01-01

    In a quest to improve space-based observational capability, an increasing number of investigators are proposing missions with precision formation flying architectures. Typical missions include the Micro- Arcsecond X-ray Imaging Mission (MAXIM), Stellar Imager (SI), and the New Worlds Observer (NWO). Missions designed to explore targets in deep-space generally require holding a formation configuration fixed in inertial space during science observation. Analysis in this paper is specifically aimed at the NWO architecture, characterizing the natural drift of the line-of-sight and the separation range for two spacecraft operating in the vicinity of the Earth/Moon-Sun L(sub 2) libration point. Analysis employs a linear form of the relative dynamics associated with an n-body gravity field. The study is designed to identify favorable observation directions, characterized by minimal line-of-sight drift, along the mission timeline.

  15. UAV formation control design with obstacle avoidance in dynamic three-dimensional environment.

    Science.gov (United States)

    Chang, Kai; Xia, Yuanqing; Huang, Kaoli

    2016-01-01

    This paper considers the artificial potential field method combined with rotational vectors for a general problem of multi-unmanned aerial vehicle (UAV) systems tracking a moving target in dynamic three-dimensional environment. An attractive potential field is generated between the leader and the target. It drives the leader to track the target based on the relative position of them. The other UAVs in the formation are controlled to follow the leader by the attractive control force. The repulsive force affects among the UAVs to avoid collisions and distribute the UAVs evenly on the spherical surface whose center is the leader-UAV. Specific orders or positions of the UAVs are not required. The trajectories of avoidance obstacle can be obtained through two kinds of potential field with rotation vectors. Every UAV can choose the optimal trajectory to avoid the obstacle and reconfigure the formation after passing the obstacle. Simulations study on UAV are presented to demonstrate the effectiveness of proposed method.

  16. Hydrogen Recombination and Dimer Formation on Graphite from Ab Initio Molecular Dynamics Simulations.

    Science.gov (United States)

    Casolo, S; Tantardini, G F; Martinazzo, R

    2016-07-14

    We studied Eley-Rideal molecular hydrogen formation on graphite using ab initio molecular dynamics, in the energy range relevant for the chemistry of the interstellar medium and for terrestrial experiments employing cold plasma (0.02-1 eV). We found substantial projectile steering effects that prevent dimer formation at low energies, thereby ruling out any catalytic synthetic pathways that form hydrogen molecules. Ortho and para dimers do form efficiently thanks to preferential sticking, but only at energies that are too high to be relevant for the chemistry of the interstellar medium. Computed reaction cross sections and ro-vibrational product populations are in good agreement with available experimental data and capable of generating adsorbate configurations similar to those observed with scanning tunneling microscopy techniques. PMID:26905385

  17. Ultrafast thermal dynamics of nano-ripples formation via laser double pulses excitation

    Science.gov (United States)

    Du, Guangqing; Wu, Yanmin; Uddin, Noor; Yang, Qing; Chen, Feng; Lu, Yu; Bian, Hao; Hou, Xun

    2016-09-01

    The ultrafast thermal dynamics of nano-ripples formation on gold film via ultrafast laser double pulses excitation is theoretically investigated by numerical simulations. The non-equilibrium thermal modulations with respect to the electron and phonon energy transfers within gold film is proposed for predicting the nano-ripples formation. It is revealed that the nano-ripples contrast on gold film surface can be well controlled via tuning the pulse energy ratio, pulse separation and pulse exchange of ultrafast laser double-pulse. It is attributed to the tunable energy transfer routes between the electron thermal diffusion and the electron-phonon coupling via tuning double pulses parameters. The study provides theoretical basis for producing high-contrast ripples for a wide range application in the fields such as high-absorptive solar cells, surface friction devices and super-hydrophobic surface.

  18. Formation of NiZr2 Binary Metallic Glass: Experimental and Molecular Dynamics Analyses

    Institute of Scientific and Technical Information of China (English)

    WANG Li; ZHANG Yan-Ning; MAO Xiu-Ming; PENG Chuan-Xiao

    2007-01-01

    @@ The local atomic structure of an amorphous NiZr2 alloy is identified by using x-ray diffraction, transmission electron microscopy, and differential scanning calorimeter. Based on the experimental results, molecular dynamics simulation is performed to investigate the glass formation of liquid NiZr2 alloy. Some relevant features of the pair correlation functions are in good agreement with those obtained by experiment. The pair analysis parameters are calculated, suggesting that there exist icosahedral ordering, four-fold symmetrical bipyramid and triangularfaced polyhedral units in the amorphous NiZr2 structure. The result is beneficial to open avenues toward the understanding of fundamental theoretical problems of glass formation of simple binary alloys.

  19. Molecular dynamics simulation of ion focusing and crowdion formation in self-ion-irradiated Fe

    Energy Technology Data Exchange (ETDEWEB)

    Chen Di [Department of Nuclear Engineering, Texas A and M University, College Station, Texas 77843 (United States); Shao Lin, E-mail: lshao@mailaps.org [Department of Nuclear Engineering, Texas A and M University, College Station, Texas 77843 (United States)

    2012-02-01

    We have used molecular dynamics (MD) simulation to investigate damage and defect development in a Left-Pointing-Angle-Bracket 1 0 0 Right-Pointing-Angle-Bracket Fe substrate upon 2 keV Fe ion bombardment. The damage cascade formation is accompanied by atomic shifting over a limited distance along the direction of one atomic row, which leads to formation of crowdions aligned with Left-Pointing-Angle-Bracket 1 1 1 Right-Pointing-Angle-Bracket direction. At the end of structural relaxation and defect recombination, crowdions lead to formation of dumbbell defects - a type of vacancy-interstitial complexes having one vacancy between a pair of slightly displaced interstitials. The dumbbell defects are initially oriented along Left-Pointing-Angle-Bracket 1 1 1 Right-Pointing-Angle-Bracket direction. After a typical period of 0.2 ps, some dumbbell defects rotate towards Left-Pointing-Angle-Bracket 1 1 0 Right-Pointing-Angle-Bracket direction. Crowdion and dumbbell defect formation influence the time dependent damage buildups.

  20. DYNAMICAL FORMATION OF CAVITY IN A COMPOSED HYPER-ELASTIC SPHERE

    Institute of Scientific and Technical Information of China (English)

    任九生; 程昌钧

    2004-01-01

    The dynamical formation of cavity in a hyper-elastic sphere composed of two materials with the incompressible strain energy function, subjected to a suddenly applied uniform radial tensile boundary dead-load, was studied following the theory of finite deformation dynamics. Besides a trivial solution corresponding to the homogeneous static state, a cavity forms at the center of the sphere when the tensile load is larger than its critical value. An exact differential relation between the cavity radius and the tensile land was obtained. It is proved that the evolution of cavity radius with time displays nonlinear periodic oscillations. The phase diagram for oscillation, the maximum amplitude, the approximate period and the critical load were all discussed.

  1. Deracemization of Axially Chiral Nicotinamides by Dynamic Salt Formation with Enantiopure Dibenzoyltartaric Acid (DBTA

    Directory of Open Access Journals (Sweden)

    Fumitoshi Yagishita

    2013-11-01

    Full Text Available Dynamic atroposelective resolution of chiral salts derived from oily racemic nicotinamides and enantiopure dibenzoyltartaric acid (DBTA was achieved by crystallization. The absolute structures of the axial chiral nicotinamides were determined by X-ray structural analysis. The chirality could be controlled by the selection of enantiopure DBTA as a chiral auxiliary. The axial chirality generated by dynamic salt formation was retained for a long period after dissolving the chiral salt in solution even after removal of the chiral acid. The rate of racemization of nicotinamides could be controlled based on the temperature and solvent properties, and that of the salts was prolonged compared to free nicotinamides, as the molecular structure of the pyridinium ion in the salts was different from that of acid-free nicotinamides.

  2. The Structure, Dynamics and Star Formation Rate of the Orion Nebula Cluster

    CERN Document Server

    Da Rio, Nicola; Jaehnig, Karl

    2014-01-01

    The spatial morphology and dynamical status of a young, still-forming stellar cluster provide valuable clues on the conditions during the star formation event and the processes that regulated it. We analyze the Orion Nebula Cluster (ONC), utilizing the latest censuses of its stellar content and membership estimates over a large wavelength range. We determine the center of mass of the ONC, and study the radial dependence of angular substructure. The core appears rounder and smoother than the outskirts, consistent with a higher degree of dynamical processing. At larger distances the departure from circular symmetry is mostly driven by the elongation of the system, with very little additional substructure, indicating a somewhat evolved spatial morphology or an expanding halo. We determine the mass density profile of the cluster, which is well fitted by a power law that is slightly steeper than a singular isothermal sphere. Together with the ISM density, estimated from average stellar extinction, the mass content...

  3. Aperiodic dynamics in a deterministic model of attitude formation in social groups

    CERN Document Server

    Ward, Jonathan

    2013-01-01

    Homophily and social influence are the fundamental mechanisms that drive the evolution of attitudes, beliefs and behaviour within social groups. Homophily relates the similarity between pairs of individuals' attitudinal states to their frequency of interaction, and hence structural tie strength, while social influence causes the convergence of individuals' states during interaction. Building on these basic elements, we propose a new mathematical modelling framework to describe the evolution of attitudes within a group of interacting agents. Specifically, our model describes sub-conscious attitudes that have an activator-inhibitor relationship. We consider a homogeneous population using a deterministic, continuous-time dynamical system. Surprisingly, the combined effects of homophily and social influence do not necessarily lead to group consensus or global monoculture. We observe that sub-group formation and polarisation-like effects may be transient, the long-time dynamics being quasi-periodic with sensitive ...

  4. FORMATION OF MICRO-POROUS SPHERICAL PARTICLES OF CALCIUM SILICATE (XONOTLITE) IN DYNAMIC HYDROTHERMAL PROCESS

    Institute of Scientific and Technical Information of China (English)

    Maoqiang Li; Hongxun Liang

    2004-01-01

    Stirring during hydrothermal synthesis plays an important role in the formation of porous spherical xonotlite particles. The size of spherical particles formed during dynamic hydrothermal process is related to the size of minimum vortices in the reaction slurry, which is determined by stirring speed. The kinetics of growth of xonotlite particles is determined by measuring the apparent viscosity of the reactant slurry at various reaction time and reaction temperatures. It is found that the growth of particles follows the contracting-volume equation, and the activation energies for nucleation and growth are 104 and 123 kJ·mol-1, respectively.

  5. Spike Train Dynamics Underlying Pattern Formation in Integrate-and-Fire Oscillator Networks

    Science.gov (United States)

    Bressloff, P. C.; Coombes, S.

    1998-09-01

    A dynamical mechanism underlying pattern formation in a spatially extended network of integrate-and-fire oscillators with synaptic interactions is identified. It is shown how in the strong coupling regime the network undergoes a discrete Turing-Hopf bifurcation of the firing times from a synchronous state to a state with periodic or quasiperiodic variations of the interspike intervals on closed orbits. The separation of these orbits in phase space results in a spatially periodic pattern of mean firing rate across the network that is modulated by deterministic fluctuations of the instantaneous firing rate.

  6. The Formation of Uranus and Neptune in Solid-Rich Feeding Zones: Connecting Chemistry and Dynamics

    OpenAIRE

    Dodson-Robinson, Sarah E.; Bodenheimer, Peter

    2009-01-01

    The core accretion theory of planet formation has at least two fundamental problems explaining the origins of Uranus and Neptune: (1) dynamical times in the trans-Saturnian solar nebula are so long that core growth can take > 15 Myr, and (2) the onset of runaway gas accretion that begins when cores reach 10 Earth masses necessitates a sudden gas accretion cutoff just as the ice giant cores reach critical mass. Both problems may be resolved by allowing the ice giants to migrate outward after t...

  7. The structure, dynamics, and star formation rate of the Orion nebula cluster

    International Nuclear Information System (INIS)

    The spatial morphology and dynamical status of a young, still-forming stellar cluster provide valuable clues to the conditions during the star formation event and the processes that regulated it. We analyze the Orion Nebula Cluster (ONC), utilizing the latest censuses of its stellar content and membership estimates over a large wavelength range. We determine the center of mass of the ONC and study the radial dependence of angular substructure. The core appears rounder and smoother than the outskirts, which is consistent with a higher degree of dynamical processing. At larger distances, the departure from circular symmetry is mostly driven by the elongation of the system, with very little additional substructure, indicating a somewhat evolved spatial morphology or an expanding halo. We determine the mass density profile of the cluster, which is well fitted by a power law that is slightly steeper than a singular isothermal sphere. Together with the interstellar medium density, which is estimated from average stellar extinction, the mass content of the ONC is insufficient by a factor ∼1.8 to reproduce the observed velocity dispersion from virialized motions, in agreement with previous assessments that the ONC is moderately supervirial. This may indicate recent gas dispersal. Based on the latest estimates for the age spread in the system and our density profiles, we find that at the half-mass radius, 90% of the stellar population formed within ∼5-8 free-fall times (t ff). This implies a star formation efficiency per t ff of εff ∼ 0.04-0.07 (i.e., relatively slow and inefficient star formation rates during star cluster formation).

  8. CHARACTERIZING THE BROWN DWARF FORMATION CHANNELS FROM THE INITIAL MASS FUNCTION AND BINARY-STAR DYNAMICS

    International Nuclear Information System (INIS)

    The stellar initial mass function (IMF) is a key property of stellar populations. There is growing evidence that the classical star-formation mechanism by the direct cloud fragmentation process has difficulties reproducing the observed abundance and binary properties of brown dwarfs and very-low-mass stars. In particular, recent analytical derivations of the stellar IMF exhibit a deficit of brown dwarfs compared to observational data. Here we derive the residual mass function of brown dwarfs as an empirical measure of the brown dwarf deficiency in recent star-formation models with respect to observations and show that it is compatible with the substellar part of the Thies-Kroupa IMF and the mass function obtained by numerical simulations. We conclude that the existing models may be further improved by including a substellar correction term that accounts for additional formation channels like disk or filament fragmentation. The term ''peripheral fragmentation'' is introduced here for such additional formation channels. In addition, we present an updated analytical model of stellar and substellar binarity. The resulting binary fraction and the dynamically evolved companion mass-ratio distribution are in good agreement with observational data on stellar and very-low-mass binaries in the Galactic field, in clusters, and in dynamically unprocessed groups of stars if all stars form as binaries with stellar companions. Cautionary notes are given on the proper analysis of mass functions and the companion mass-ratio distribution and the interpretation of the results. The existence of accretion disks around young brown dwarfs does not imply that these form just like stars in direct fragmentation

  9. CHARACTERIZING THE BROWN DWARF FORMATION CHANNELS FROM THE INITIAL MASS FUNCTION AND BINARY-STAR DYNAMICS

    Energy Technology Data Exchange (ETDEWEB)

    Thies, Ingo; Pflamm-Altenburg, Jan; Kroupa, Pavel; Marks, Michael [Helmholtz-Institut für Strahlen- und Kernphysik (HISKP), Universität Bonn, Nussallee 14-16, D-53115 Bonn (Germany)

    2015-02-10

    The stellar initial mass function (IMF) is a key property of stellar populations. There is growing evidence that the classical star-formation mechanism by the direct cloud fragmentation process has difficulties reproducing the observed abundance and binary properties of brown dwarfs and very-low-mass stars. In particular, recent analytical derivations of the stellar IMF exhibit a deficit of brown dwarfs compared to observational data. Here we derive the residual mass function of brown dwarfs as an empirical measure of the brown dwarf deficiency in recent star-formation models with respect to observations and show that it is compatible with the substellar part of the Thies-Kroupa IMF and the mass function obtained by numerical simulations. We conclude that the existing models may be further improved by including a substellar correction term that accounts for additional formation channels like disk or filament fragmentation. The term ''peripheral fragmentation'' is introduced here for such additional formation channels. In addition, we present an updated analytical model of stellar and substellar binarity. The resulting binary fraction and the dynamically evolved companion mass-ratio distribution are in good agreement with observational data on stellar and very-low-mass binaries in the Galactic field, in clusters, and in dynamically unprocessed groups of stars if all stars form as binaries with stellar companions. Cautionary notes are given on the proper analysis of mass functions and the companion mass-ratio distribution and the interpretation of the results. The existence of accretion disks around young brown dwarfs does not imply that these form just like stars in direct fragmentation.

  10. Mediating Dynamic Supply Chain Formation by Collaborative Single Machine Earliness/Tardiness Agents in Supply Mesh

    Directory of Open Access Journals (Sweden)

    Hang Yang

    2014-01-01

    Full Text Available Nowadays, a trend of forming dynamic supply chains with different trading partners over different e-marketplaces has emerged. These supply chains, which are called “supply mesh,” generally refer to heterogeneous electronic marketplaces in which dynamic supply chains, as per project (often make-to-order, are formed across different parties. Conceptually, in a supply mesh a dynamic supply chain is formed vertically, mediating several companies for a project. Companies that are on the same level horizontally are either competitors or cohorts. A complex scenario such as this makes it challenging to find the right group of members for a dynamic supply chain. Earlier on, a multiagent model called the collaborative single machine earliness/tardiness (CSET model was proposed for the optimal formation of make-to-order supply chains. This paper contributes the particular agent designs, for enabling the mediation of CSET in a supply mesh, and the possibilities are discussed. It is demonstrated via a computer simulation, based on samples from the U.S. textile industry, that by using intelligent agents under the CSET model it is possible to automatically find an ideal group of trading partners from a supply mesh.

  11. Aperiodic dynamics in a deterministic adaptive network model of attitude formation in social groups

    Science.gov (United States)

    Ward, Jonathan A.; Grindrod, Peter

    2014-07-01

    Adaptive network models, in which node states and network topology coevolve, arise naturally in models of social dynamics that incorporate homophily and social influence. Homophily relates the similarity between pairs of nodes' states to their network coupling strength, whilst social influence causes coupled nodes' states to convergence. In this paper we propose a deterministic adaptive network model of attitude formation in social groups that includes these effects, and in which the attitudinal dynamics are represented by an activato-inhibitor process. We illustrate that consensus, corresponding to all nodes adopting the same attitudinal state and being fully connected, may destabilise via Turing instability, giving rise to aperiodic dynamics with sensitive dependence on initial conditions. These aperiodic dynamics correspond to the formation and dissolution of sub-groups that adopt contrasting attitudes. We discuss our findings in the context of cultural polarisation phenomena. Social influence. This reflects the fact that people tend to modify their behaviour and attitudes in response to the opinions of others [22-26]. We model social influence via diffusion: agents adjust their state according to a weighted sum (dictated by the evolving network) of the differences between their state and the states of their neighbours. Homophily. This relates the similarity of individuals' states to their frequency and strength of interaction [27]. Thus in our model, homophily drives the evolution of the weighted ‘social' network. A precise formulation of our model is given in Section 2. Social influence and homophily underpin models of social dynamics [21], which cover a wide range of sociological phenomena, including the diffusion of innovations [28-32], complex contagions [33-36], collective action [37-39], opinion dynamics [19,20,40,10,11,13,15,41,16], the emergence of social norms [42-44], group stability [45], social differentiation [46] and, of particular relevance

  12. Sediment infilling and wetland formation dynamics in an active crevasse splay of the Mississippi River delta

    Science.gov (United States)

    Cahoon, Donald R.; White, David A.; Lynch, James C.

    2011-01-01

    Crevasse splay environments provide a mesocosm for evaluating wetland formation and maintenance processes on a decadal time scale. Site elevation, water levels, vertical accretion, elevation change, shallow subsidence, and plant biomass were measured at five habitats along an elevation gradient to evaluate wetland formation and development in Brant Pass Splay; an active crevasse splay of the Balize delta of the Mississippi River. The processes of vertical development (vertical accretion, elevation change, and shallow subsidence) were measured with the surface elevation table–marker horizon method. There were three distinct stages to the accrual of elevation capital and wetland formation in the splay: sediment infilling, vegetative colonization, and development of a mature wetland community. Accretion, elevation gain, and shallow subsidence all decreased by an order of magnitude from the open water (lowest elevation) to the forest (highest elevation) habitats. Vegetative colonization occurred within the first growing season following emergence of the mud surface. An explosively high rate of below-ground production quickly stabilized the loosely consolidated sub-aerial sediments. After emergent vegetation colonization, vertical development slowed and maintenance of marsh elevation was driven both by sediment trapping by the vegetation and accumulation of plant organic matter in the soil. Continued vertical development and survival of the marsh then depended on the health and productivity of the plant community. The process of delta wetland formation is both complex and nonlinear. Determining the dynamics of wetland formation will help in understanding the processes driving the past building of the delta and in developing models for restoring degraded wetlands in the Mississippi River delta and other deltas around the world.

  13. Dynamical formation and evolution of (2+1)-dimensional charged black holes

    International Nuclear Information System (INIS)

    In this paper, we investigate the dynamical formation and evolution of (2 + 1)-dimensional charged black holes. We numerically study dynamical collapses of charged matter fields in an anti-de Sitter background and note the formation of black holes using the double-null formalism. Moreover, we include renormalized energy-momentum tensors assuming the S-wave approximation to determine thermodynamical back-reactions to the internal structures. If there are no semi-classical effects, the amount of charge determines the causal structures. If the charge is sufficiently small, the causal structure has a space-like singularity. However, as the charge increases, an inner Cauchy horizon appears. If we have sufficient charge, we see a space-like outer horizon and a time-like inner horizon, and if we give excessive charge, black hole horizons disappear. We have some circumstantial evidence that weak cosmic censorship is still satisfied, even for such excessive charge cases. Also, we confirm that there is mass inflation along the inner horizon, although the properties are quite different from those of four-dimensional cases. Semi-classical back-reactions will not affect the outer horizon, but they will affect the inner horizon. Near the center, there is a place where negative energy is concentrated. Thus, charged black holes in three dimensions have two types of curvature singularities in general: via mass inflation and via a concentration of negative energy. Finally, we classify possible causal structures. (paper)

  14. Dynamical formation and evolution of (2+1)-dimensional charged black holes

    CERN Document Server

    Hwang, Dong-il; Yeom, Dong-han

    2011-01-01

    In this paper, we investigate the dynamical formation and evolution of 2+1-dimensional charged black holes. We numerically study dynamical collapses of charged matter fields in an anti de Sitter background and note the formation of black holes using the double-null formalism. Moreover, we include re-normalized energy-momentum tensors assuming the S-wave approximation to determine thermodynamical back-reactions to the internal structures. If there is no semi-classical effects, the amount of charge determines the causal structures. If the charge is sufficiently small, the causal structure has a space-like singularity. However, as the charge increases, an inner Cauchy horizon appears. If we have sufficient charge, we see a space-like outer horizon and a time-like inner horizon, and if we give excessive charge, black hole horizons disappear. We have some circumstantial evidences that weak cosmic censorship is still satisfied, even for such excessive charge cases. Also, we confirm that there is mass inflation alon...

  15. Dynamical formation and evolution of (2+1)-dimensional charged black holes

    Science.gov (United States)

    Hwang, Dong-il; Kim, Hongbin; Yeom, Dong-han

    2012-03-01

    In this paper, we investigate the dynamical formation and evolution of (2 + 1)-dimensional charged black holes. We numerically study dynamical collapses of charged matter fields in an anti-de Sitter background and note the formation of black holes using the double-null formalism. Moreover, we include renormalized energy-momentum tensors assuming the S-wave approximation to determine thermodynamical back-reactions to the internal structures. If there are no semi-classical effects, the amount of charge determines the causal structures. If the charge is sufficiently small, the causal structure has a space-like singularity. However, as the charge increases, an inner Cauchy horizon appears. If we have sufficient charge, we see a space-like outer horizon and a time-like inner horizon, and if we give excessive charge, black hole horizons disappear. We have some circumstantial evidence that weak cosmic censorship is still satisfied, even for such excessive charge cases. Also, we confirm that there is mass inflation along the inner horizon, although the properties are quite different from those of four-dimensional cases. Semi-classical back-reactions will not affect the outer horizon, but they will affect the inner horizon. Near the center, there is a place where negative energy is concentrated. Thus, charged black holes in three dimensions have two types of curvature singularities in general: via mass inflation and via a concentration of negative energy. Finally, we classify possible causal structures.

  16. Ultrafast electronic and vibrational dynamics in brominated aluminum corroles: Energy relaxation and triplet formation

    Directory of Open Access Journals (Sweden)

    T. Stensitzki

    2016-07-01

    Full Text Available We combined femtosecond (fs VIS pump–IR probe spectroscopy with fs VIS pump–supercontinuum probe spectroscopy to characterize the photoreaction of the hexacoordinated Al(tpfc-Br8(py2 in a comprehensive way. Upon fs excitation at ∼400 nm in the Soret band, the excitation energy relaxes with a time constant of (250 ± 80 fs to the S2 and S1 electronic excited states. This is evident from the rise time of the stimulated emission signal in the visible spectral range. On the same time scale, narrowing of broad infrared signals in the C=C stretching region around 1500 cm−1 is observed. Energy redistribution processes are visible in the vibrational and electronic dynamics with time constants between ∼2 ps and ∼20 ps. Triplet formation is detected with a time constant of (95 ± 3 ps. This is tracked by the complete loss of stimulated emission. Electronic transition of the emerging triplet absorption band overlaps considerably with the singlet excited state absorption. In contrast, two well separated vibrational marker bands for triplet formation were identified at 1477 cm−1 and at 1508 cm−1. These marker bands allow a precise identification of triplet dynamics in corrole systems.

  17. Ultrafast electronic and vibrational dynamics in brominated aluminum corroles: Energy relaxation and triplet formation.

    Science.gov (United States)

    Stensitzki, T; Yang, Y; Berg, A; Mahammed, A; Gross, Z; Heyne, K

    2016-07-01

    We combined femtosecond (fs) VIS pump-IR probe spectroscopy with fs VIS pump-supercontinuum probe spectroscopy to characterize the photoreaction of the hexacoordinated Al(tpfc-Br8)(py)2 in a comprehensive way. Upon fs excitation at ∼400 nm in the Soret band, the excitation energy relaxes with a time constant of (250 ± 80) fs to the S2 and S1 electronic excited states. This is evident from the rise time of the stimulated emission signal in the visible spectral range. On the same time scale, narrowing of broad infrared signals in the C=C stretching region around 1500 cm(-1) is observed. Energy redistribution processes are visible in the vibrational and electronic dynamics with time constants between ∼2 ps and ∼20 ps. Triplet formation is detected with a time constant of (95 ± 3) ps. This is tracked by the complete loss of stimulated emission. Electronic transition of the emerging triplet absorption band overlaps considerably with the singlet excited state absorption. In contrast, two well separated vibrational marker bands for triplet formation were identified at 1477 cm(-1) and at 1508 cm(-1). These marker bands allow a precise identification of triplet dynamics in corrole systems. PMID:27226980

  18. Compound nucleus formation probability PCN defined within the dynamical cluster-decay model

    Science.gov (United States)

    Chopra, Sahila; Kaur, Arshdeep; Gupta, Raj K.

    2015-01-01

    With in the dynamical cluster-decay model (DCM), the compound nucleus fusion/ formation probability PCN is defined for the first time, and its variation with CN excitation energy E* and fissility parameter χ is studied. In DCM, the (total) fusion cross section σfusion is sum of the compound nucleus (CN) and noncompound nucleus (nCN) decay processes, each calculated as the dynamical fragmentation process. The CN cross section σCN is constituted of the evaporation residues (ER) and fusion-fission (ff), including the intermediate mass fragments (IMFs), each calculated for all contributing decay fragments (A1, A2) in terms of their formation and barrier penetration probabilities P0 and P. The nCN cross section σnCN is determined as the quasi-fission (qf) process where P0=1 and P is calculated for the entrance channel nuclei. The calculations are presented for six different target-projectile combinations of CN mass A~100 to superheavy, at various different center-of-mass energies with effects of deformations and orientations of nuclei included in it. Interesting results are that the PCN=1 for complete fusion, but PCN <1 or ≪1 due to the nCN conribution, depending strongly on both E* and χ.

  19. Compound nucleus formation probability PCN defined within the dynamical cluster-decay model

    Directory of Open Access Journals (Sweden)

    Chopra Sahila

    2015-01-01

    Full Text Available With in the dynamical cluster-decay model (DCM, the compound nucleus fusion/ formation probability PCN is defined for the first time, and its variation with CN excitation energy E* and fissility parameter χ is studied. In DCM, the (total fusion cross section σfusion is sum of the compound nucleus (CN and noncompound nucleus (nCN decay processes, each calculated as the dynamical fragmentation process. The CN cross section σCN is constituted of the evaporation residues (ER and fusion-fission (ff, including the intermediate mass fragments (IMFs, each calculated for all contributing decay fragments (A1, A2 in terms of their formation and barrier penetration probabilities P0 and P. The nCN cross section σnCN is determined as the quasi-fission (qf process where P0=1 and P is calculated for the entrance channel nuclei. The calculations are presented for six different target-projectile combinations of CN mass A~100 to superheavy, at various different center-of-mass energies with effects of deformations and orientations of nuclei included in it. Interesting results are that the PCN=1 for complete fusion, but PCN <1 or ≪1 due to the nCN conribution, depending strongly on both E* and χ.

  20. Dark-ages Reionization & Galaxy Formation Simulation I: The dynamical lives of high redshift galaxies

    CERN Document Server

    Poole, Gregory B; Mutch, Simon J; Power, Chris; Duffy, Alan R; Geil, Paul M; Mesinger, Andrei; Wyithe, Stuart B

    2015-01-01

    We present the Dark-ages Reionization and Galaxy-formation Observables from Numerical Simulations (DRAGONS) program and Tiamat, the collisionless N-body simulation program upon which DRAGONS is built. The primary trait distinguishing Tiamat from other large simulation programs is its density of outputs at high redshift (100 from z=35 to z=5; roughly one every 10 Myr) enabling the construction of very accurate merger trees at an epoch when galaxy formation is rapid and mergers extremely frequent. We find that the friends-of-friends halo mass function agrees well with the prediction of Watson et al. at high masses, but deviates at low masses, perhaps due to our use of a different halo finder or perhaps indicating a break from "universal" behaviour. We then analyse the dynamical evolution of galaxies during the Epoch of Reionization finding that only a small fraction (~20%) of galactic halos are relaxed. We illustrate this using standard relaxation metrics to establish two dynamical recovery time-scales: i) halo...

  1. An aerosol dynamics model for simulating particle formation and growth in a mixed flow chamber

    Directory of Open Access Journals (Sweden)

    M. Vesterinen

    2011-02-01

    Full Text Available In this work we model the aerosol size distribution dynamics in a mixed flow chamber in which new particles are formed via nucleation and subsequent condensation of oxidation products of VOCs emitted from Norway spruce seedlings. The microphysical processes included in the model are nucleation, condensation, deposition and coagulation. The aerosol dynamics in the chamber is a competition between aerosol growth and scavenging/deposition which results in a cyclic particle formation process. With a simple 1-product model, in which the formed gas is able to both condense to the particles and nucleate, we are able to catch both the oscillatory features of the particle formation process and the evolution of the number concentration in a reasonable way. The gas-phase chemistry was adjusted using pre-estimated reaction rate constant in the simulations and the particle deposition rate as a function of size was determined experimentally. Despite this, some of the essential features of the physical properties of the aerosol population could still be captured and investigated without the detailed knowledge of the physical processes underlying the problem by using the constructed model. The size dependency of the wall loss coefficient was investigated using a slightly modified measurement set-up.

  2. The DYNAFLUX / DYNACOLD Network: Dynamics, Fluxes, Stability, Succession and Landscape Formation in Cold Environments

    Science.gov (United States)

    Beylich, A. A.; Molau, U.

    2012-04-01

    Within Europe there is a wide array of high-latitude and high-altitude landscapes, covering a significant proportion of the total land area. These cold climate landscapes represent a variety of stages of deglaciation history and landscape formation. We find landscapes at different levels of postglacial stabilization providing the unique possibility to study the interactions between geo-, bio-, social and socio-economic systems at the land surface. The DYNAFLUX / DYNACOLD Network (2004 - ) bridges across geo-, bio-, social and socio-economic sciences in order to investigate the complex dynamics of stabilization, succession and landscape formation during and after ice retreat and under human impact. DYNAFLUX / DYNACOLD provides a multidisciplinary forum where research groups come together. The integrated approach provides - in addition to newly generated disciplinary knowledge - the qualitative and quantitative linkages of findings from geo-, bio- and socio-work groups to develop a systems-based holistic level-of-understanding about the dynamics of environmental fluxes in high-latitude and high-altitude geo-ecosystems and landscapes. This knowledge can be used to assess the risks and potentials of the future development with reference to land use intensity / changes and climatic dynamics. DYNAFLUX / DYNACOLD is since 2004 linking and integrating a number of networks and programmes and creates an umbrella programme and a forum for sharing knowledge. The focus of the Network is relevant for different end users, including risk and vulnerability assessment, sustainable land use, land management and conservation. Also questions with regards to Global Change are addressed (hazards, permafrost degradation, loss of biodiversity, etc.).

  3. A genetic algorithm for a bi-objective mathematical model for dynamic virtual cell formation problem

    Science.gov (United States)

    Moradgholi, Mostafa; Paydar, Mohammad Mahdi; Mahdavi, Iraj; Jouzdani, Javid

    2016-05-01

    Nowadays, with the increasing pressure of the competitive business environment and demand for diverse products, manufacturers are force to seek for solutions that reduce production costs and rise product quality. Cellular manufacturing system (CMS), as a means to this end, has been a point of attraction to both researchers and practitioners. Limitations of cell formation problem (CFP), as one of important topics in CMS, have led to the introduction of virtual CMS (VCMS). This research addresses a bi-objective dynamic virtual cell formation problem (DVCFP) with the objective of finding the optimal formation of cells, considering the material handling costs, fixed machine installation costs and variable production costs of machines and workforce. Furthermore, we consider different skills on different machines in workforce assignment in a multi-period planning horizon. The bi-objective model is transformed to a single-objective fuzzy goal programming model and to show its performance; numerical examples are solved using the LINGO software. In addition, genetic algorithm (GA) is customized to tackle large-scale instances of the problems to show the performance of the solution method.

  4. New Worlds Observer Formation Control Design Based on the Dynamics of Relative Motion

    Science.gov (United States)

    Luquette, Richard J.

    2008-01-01

    The New Worlds Observer (NWO) mission is designed for the direct detection and characterization of extrasolar planets. The NWO mission concept employs a two spacecraft leader-follower formation on a trajectory around the Earth/Moon-Sun L(sub 2) Libration Point. The leader spacecraft is baselined as a 4 meter optical telescope. The follower, Starshade spacecraft, is designed to suppress light from a central body star permitting direct detection of a surrounding exoplanetary system. The current design requires a nominal leader-follower separation range of 72 Megameters. NWO poses many challenges including formation control. NWO cycles between three principal control modes during the nominal mission timeline: science (fine pointing), realignment and transition. This paper examines formation control strategies in the context of dynamics of relative motion for two spacecraft operating in the vicinity of the Earth/Moon-Sun L(sub 2)libration point. The paper presents an overview of the equations of relative motion followed by a discussion of each of the control modes. Discussion and analysis characterize control strategies for each of the mission control modes, including requirements, implementation challenges and project fuel budgets.

  5. Droplet formation and growth inside a polymer network: A molecular dynamics simulation study

    Science.gov (United States)

    Jung, Jiyun; Jang, Eunseon; Shoaib, Mahbubul Alam; Jo, Kyubong; Kim, Jun Soo

    2016-04-01

    We present a molecular dynamics simulation study that focuses on the formation and growth of nanoscale droplets inside polymer networks. Droplet formation and growth are investigated by the liquid-vapor phase separation of a dilute Lennard-Jones (LJ) fluid inside regularly crosslinked, polymer networks with varying mesh sizes. In a polymer network with small mesh sizes, droplet formation can be suppressed, the extent of which is dependent on the attraction strength between the LJ particles. When droplets form in a polymer network with intermediate mesh sizes, subsequent growth is significantly slower when compared with that in bulk without a polymer network. Interestingly, droplet growth beyond the initial nucleation stage occurs by different mechanisms depending on the mesh size: droplets grow mainly by diffusion and coalescence inside polymer networks with large mesh sizes (as observed in bulk), whereas Ostwald ripening becomes a more dominant mechanism for droplet growth for small mesh sizes. The analysis of droplet trajectories clearly reveals the obstruction effect of the polymer network on the movement of growing droplets, which leads to Ostwald ripening of droplets. This study suggests how polymer networks can be used to control the growth of nanoscale droplets.

  6. The Formation of Uranus and Neptune in Solid-Rich Feeding Zones: Connecting Chemistry and Dynamics

    CERN Document Server

    Dodson-Robinson, Sarah E

    2009-01-01

    The core accretion theory of planet formation has at least two fundamental problems explaining the origins of Uranus and Neptune: (1) dynamical times in the trans-Saturnian solar nebula are so long that core growth can take > 15 Myr, and (2) the onset of runaway gas accretion that begins when cores reach 10 Earth masses necessitates a sudden gas accretion cutoff just as the ice giant cores reach critical mass. Both problems may be resolved by allowing the ice giants to migrate outward after their formation in solid-rich feeding zones with planetesimal surface densities well above the minimum-mass solar nebula. We present new simulations of the formation of Uranus and Neptune in the solid-rich disk of Dodson-Robinson et al. (2009) using the initial semimajor axis distribution of the Nice model (Gomes et al. 2005; Morbidelli et al. 2005; Tsiganis et al. 2005), with one ice giant forming at 12 AU and the other at 15 AU. The innermost ice giant reaches its present mass after 3.8-4.0 Myr and the outermost after 5....

  7. Size distribution dynamics reveal particle-phase chemistry in organic aerosol formation.

    Science.gov (United States)

    Shiraiwa, Manabu; Yee, Lindsay D; Schilling, Katherine A; Loza, Christine L; Craven, Jill S; Zuend, Andreas; Ziemann, Paul J; Seinfeld, John H

    2013-07-16

    Organic aerosols are ubiquitous in the atmosphere and play a central role in climate, air quality, and public health. The aerosol size distribution is key in determining its optical properties and cloud condensation nucleus activity. The dominant portion of organic aerosol is formed through gas-phase oxidation of volatile organic compounds, so-called secondary organic aerosols (SOAs). Typical experimental measurements of SOA formation include total SOA mass and atomic oxygen-to-carbon ratio. These measurements, alone, are generally insufficient to reveal the extent to which condensed-phase reactions occur in conjunction with the multigeneration gas-phase photooxidation. Combining laboratory chamber experiments and kinetic gas-particle modeling for the dodecane SOA system, here we show that the presence of particle-phase chemistry is reflected in the evolution of the SOA size distribution as well as its mass concentration. Particle-phase reactions are predicted to occur mainly at the particle surface, and the reaction products contribute more than half of the SOA mass. Chamber photooxidation with a midexperiment aldehyde injection confirms that heterogeneous reaction of aldehydes with organic hydroperoxides forming peroxyhemiacetals can lead to a large increase in SOA mass. Although experiments need to be conducted with other SOA precursor hydrocarbons, current results demonstrate coupling between particle-phase chemistry and size distribution dynamics in the formation of SOAs, thereby opening up an avenue for analysis of the SOA formation process.

  8. Molecular dynamics of single-particle impacts predicts phase diagrams for large scale pattern formation.

    Science.gov (United States)

    Norris, Scott A; Samela, Juha; Bukonte, Laura; Backman, Marie; Djurabekova, Flyura; Nordlund, Kai; Madi, Charbel S; Brenner, Michael P; Aziz, Michael J

    2011-01-01

    Energetic particle irradiation can cause surface ultra-smoothening, self-organized nanoscale pattern formation or degradation of the structural integrity of nuclear reactor components. A fundamental understanding of the mechanisms governing the selection among these outcomes has been elusive. Here we predict the mechanism governing the transition from pattern formation to flatness using only parameter-free molecular dynamics simulations of single-ion impacts as input into a multiscale analysis, obtaining good agreement with experiment. Our results overturn the paradigm attributing these phenomena to the removal of target atoms via sputter erosion: the mechanism dominating both stability and instability is the impact-induced redistribution of target atoms that are not sputtered away, with erosive effects being essentially irrelevant. We discuss the potential implications for the formation of a mysterious nanoscale topography, leading to surface degradation, of tungsten plasma-facing fusion reactor walls. Consideration of impact-induced redistribution processes may lead to a new design criterion for stability under irradiation.

  9. Molecular dynamics and Monte Carlo hybrid simulation for fuzzy tungsten nanostructure formation

    Science.gov (United States)

    Ito, A. M.; Takayama, A.; Oda, Y.; Tamura, T.; Kobayashi, R.; Hattori, T.; Ogata, S.; Ohno, N.; Kajita, S.; Yajima, M.; Noiri, Y.; Yoshimoto, Y.; Saito, S.; Takamura, S.; Murashima, T.; Miyamoto, M.; Nakamura, H.

    2015-07-01

    For the purposes of long-term use of tungsten divertor walls, the formation process of the fuzzy tungsten nanostructure induced by exposure to the helium plasma was studied. In the present paper, the fuzzy nanostructure's formation has been successfully reproduced by the new hybrid simulation method in which the deformation of the tungsten material due to pressure of the helium bubbles was simulated by the molecular dynamics and the diffusion of the helium atoms was simulated by the random walk based on the Monte Carlo method. By the simulation results, the surface height of the fuzzy nanostructure increased only when helium retention was under the steady state. It was proven that the growth of the fuzzy nanostructure was brought about by bursting of the helium bubbles. Moreover, we suggest the following key formation mechanisms of the fuzzy nanostructure: (1) lifting in which the surface lifted up by the helium bubble changes into a convexity, (2) bursting by which the region of the helium bubble changes into a concavity, and (3) the difference of the probability of helium retention by which the helium bubbles tend to appear under the concavity. Consequently, the convex-concave surface structure was enhanced and grew to create the fuzzy nanostructure.

  10. Dynamical formation signatures of black hole binaries in the first detected mergers by LIGO

    CERN Document Server

    O'Leary, Ryan M; Kocsis, Bence

    2016-01-01

    The dynamical formation of stellar-mass black hole-black hole binaries has long been a promising source of gravitational waves for the Laser Interferometer Gravitational-Wave Observatory (LIGO). Mass segregation, gravitational focusing, and multibody dynamical interactions naturally increase the interaction rate between the most massive black holes in dense stellar systems, eventually leading them to merge. We find that dynamical interactions enhance the merger rate of black hole binaries with total mass M_tot roughly as ~M_tot^beta, with beta >~ 4. We find that this relation holds mostly independently of the initial mass function, but the exact value depends on the degree of mass segregation. The detection rate of such massive black hole binaries is only further enhanced by LIGO's greater sensitivity to massive black hole binaries with M_tot <~ 80 solar masses. We find that for power-law BH mass functions dN/dM ~ M^-alpha with alpha <~ 2, LIGO is most likely to detect black hole binaries with a mass tw...

  11. Equilibrium configurations of the tethered three-body formation system and their nonlinear dynamics

    Institute of Scientific and Technical Information of China (English)

    Ming Xu; Jian-Min Zhu; Tian Tan; Shi-Jie Xu

    2012-01-01

    This paper considers nonlinear dynamics of tethered three-body formation system with their centre of mass staying on a circular orbit around the Earth,and applies the theory of space manifold dynamics to deal with the nonlinear dynamical behaviors of the equilibrium configurations of the system.Compared with the classical circular restricted three body system,sixteen equilibrium configurations are obtained globally from the geometry of pseudo-potential energy surface,four of which were omitted in the previous research.The periodic Lyapunov orbits and their invariant manifolds near the hyperbolic equilibria are presented,and an iteration procedure for identifying Lyapunov orbit is proposed based on the differential correction algorithm.The non-transversal intersections between invariant manifolds are addressed to generate homoclinic and heteroclinic trajectories between the Lyapunov orbits.(3,3)-and (2,1)-heteroclinic trajectories from the neighborhood of one collinear equilibrium to that of another one,and (3,6)-and (2,1)-homoclinic trajectories from and to the neighborhood of the same equilibrium,are obtained based on the Poincaré mapping technique.

  12. Mosaic-pattern vegetation formation and dynamics driven by the water-wind crisscross erosion

    Science.gov (United States)

    Wu, Gao-Lin; Wang, Dong; Liu, Yu; Hao, Hong-Min; Fang, Nu-Fang; Shi, Zhi-Hua

    2016-07-01

    Theoretical explanations for vegetation pattern dynamic emphasized on banded pattern-forming systems on the dynamics of the spot pattern. In this context, we explore the patch pattern forming and development in the desertification land. We hypothesized that spatial heterogeneity of microtopography and soil properties with different patch sizes would determine vegetation pattern dynamics theory. The spatial heterogeneity of microtopography and soil properties with different patch sizes were studied. Differences between the inside and outside of the canopy of soil carbon content and soil total nitrogen content were significantly increasing with patches sizes. Sampling location across vegetation patch was the main factor controlling soil properties. Soil nutrient content and saturated hydraulic conductivity were the largest, while bulk density and the coarse sand content were the lowest at the sampling location of half-way between taproot and downslope edge of the canopy. The height of the mound relative to the adjacent soil interspace between shrubs increased as patches diameter increased at the upslope of the taproot. Hydrological and aeolian processes resulted in spatial distributions of soil moisture, nutrition properties, which lead to patch migrated to downslope rather than upslope. A conceptual model was integrated hydrological and nutrient facilitation and competition effects among the plant-soil in mosaic-pattern patch formation and succession process.

  13. Dynamics for multistage pool formation of Lunnan low uplift in Tarim Basin

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    Lunnan area in the Tarim Basin has become an important onshore oil production base in China. Formation of the oil and gas pools in the low uplift of Lunnan has experienced a comparatively complex process of dynamics. Based on the hydrocarbon generation period of source rocks, the formation period of cap rocks and traps, the analysis of organic inclusion and the analysis of bitumen in the reservoir, this paper draws the conclusion that the low uplift area of Lunnan has experienced three pool formation periods: the Permian period, the Cretaceous-Early Tertiary period and the Late Tertiary-Quaternary period and two oil and gas reservoir adjustment periods: the Late Permian period and the Late Tertiary-Quaternary period. The comprehensive study indicates that the large-scale Ordovician buried hill, formed in Early Hercynian, became the reservoir during the Permian period, because the Cambrian-Lower Ordovician oil was discharged laterally into the reservoir along the top of the Ordovician weathering crust from south to north. The reservoir experienced a complicated process--reconstruc- tion in the end of Permian, adjustment in Cretaceous-Early Tertiary and re-discharging process in Late Tertiary-Qua- ternary, leading to the early original heavy oil reservoir of marine facies and the late original light oil reservoir and gas pool. Carboniferous, Triassic and Jurassic oil and gas reservoirs result from upward adjustment and re-distribution of Ordovician oil and gas reservoirs. Of those results, the formation of Triassic-Jurassic oil and gas pools came under the influence of the northward-tilting structure. The oil and gas sourcing from the different hydrocarbon source rock intervals vertically migrated into the base unconformity of Triassic system. Then the oil and gas migrated laterally from north to south and accumulated into the reservoir.

  14. Observation of bubble formation in water during microwave irradiation by dynamic light scattering

    Science.gov (United States)

    Asakuma, Yusuke; Munenaga, Takuya; Nakata, Ryosuke

    2015-10-01

    A microwave reactor was designed for in situ observation of nano- and micro-bubbles, and size profiles during and after irradiation were measured with respect to irradiation power and time. Bubble formation in water during irradiation was observed even at temperatures below the boiling point of water. The maximum size strongly depended on radiation power and time, even at a given temperature. Nano-particles in the dispersion medium were found to play an important role in achieving more stable nucleation of bubbles around particles, and stable size distributions were obtained from clear autocorrelation by a dynamic light scattering system. Moreover, a combination of microwave induction heating and the addition of nano-particles to the dispersion medium can prevent heterogeneous nucleation of bubbles on the cell wall. Quantitative nano-bubble size profiles obtained by in situ observation provide useful information regarding microwave-based industrial processes for nano-particle production.

  15. Synaptic scaling enables dynamically distinct short- and long-term memory formation.

    Directory of Open Access Journals (Sweden)

    Christian Tetzlaff

    2013-10-01

    Full Text Available Memory storage in the brain relies on mechanisms acting on time scales from minutes, for long-term synaptic potentiation, to days, for memory consolidation. During such processes, neural circuits distinguish synapses relevant for forming a long-term storage, which are consolidated, from synapses of short-term storage, which fade. How time scale integration and synaptic differentiation is simultaneously achieved remains unclear. Here we show that synaptic scaling - a slow process usually associated with the maintenance of activity homeostasis - combined with synaptic plasticity may simultaneously achieve both, thereby providing a natural separation of short- from long-term storage. The interaction between plasticity and scaling provides also an explanation for an established paradox where memory consolidation critically depends on the exact order of learning and recall. These results indicate that scaling may be fundamental for stabilizing memories, providing a dynamic link between early and late memory formation processes.

  16. Observation of bubble formation in water during microwave irradiation by dynamic light scattering

    Science.gov (United States)

    Asakuma, Yusuke; Munenaga, Takuya; Nakata, Ryosuke

    2016-09-01

    A microwave reactor was designed for in situ observation of nano- and micro-bubbles, and size profiles during and after irradiation were measured with respect to irradiation power and time. Bubble formation in water during irradiation was observed even at temperatures below the boiling point of water. The maximum size strongly depended on radiation power and time, even at a given temperature. Nano-particles in the dispersion medium were found to play an important role in achieving more stable nucleation of bubbles around particles, and stable size distributions were obtained from clear autocorrelation by a dynamic light scattering system. Moreover, a combination of microwave induction heating and the addition of nano-particles to the dispersion medium can prevent heterogeneous nucleation of bubbles on the cell wall. Quantitative nano-bubble size profiles obtained by in situ observation provide useful information regarding microwave-based industrial processes for nano-particle production.

  17. Metamorphic sole formation, emplacement and blueschist overprint: early obduction dynamics witnessed by W. Turkey ophiolites

    Science.gov (United States)

    Plunder, Alexis; Agard, Philippe; Chopin, Christian; Soret, Mathieu; Okay, Aral; Whitechurch, Hubert

    2016-04-01

    Western Turkey, with a >200 km long-belt of unmetamorphosed ophiolite overlying continental lithosphere is one or even the largest obducted ophiolite on Earth and therefore a key example to study obduction and early subduction dynamics. All Western Turkish ophiolite fragments are considered as part of the same Neotethyan branch resulting of a long-lived continental subduction (or underthrusting). Synchronous (ca. ~ 93 Ma) metamorphic sole formation and preservation at the base of most of the Turkish ophiolite fragments support this single event and place a strong constraint on the age of subduction initiation. Metamorphic soles are indeed generally considered to have formed during the early and hot subduction zone at 25 ± 10 km depths and welded to the overriding oceanic lithosphere. In Western Turkey however (as for most places worldwide) a systematic study of the pressure-temperature conditions with modern thermobarometric tools is generally lacking, and fundamental mechanisms of formation or accretion to the upper plate are poorly (if at all) constrained. We herein reappraise Western Turkish metamorphic soles focusing on the following points and issues: (i) detailed structures of metamorphic sole and other subduction derived units, petrological evolution and refined pressure-temperature conditions; peak pressure-temperature conditions of metamorphic sole were estimated using garnet, clinopyroxene, amphibole and plagioclase as the peak paragenesis at 10.5 ± 2 kbar and 800 ± 50°C based on pseudosections using the Theriak/Domino package (ii) the rather unique (and enigmatic) blueschist facies overprint found in places was investigated in terms of structural position and pressure-temperature conditions. Conditions of overprint were estimated around 12 kbar and 425 °C from the presence of glaucophane, lawsonite, jadeite and garnet overgrowing the amphibolite-facies assemblage. This field-based study provides clues to mechanisms of metamorphic sole underplating

  18. Molecular Dynamics Simulations of the Permeation of Bisphenol A and Pore Formation in a Lipid Membrane.

    Science.gov (United States)

    Chen, Liang; Chen, Junlang; Zhou, Guoquan; Wang, Yu; Xu, Can; Wang, Xiaogang

    2016-01-01

    Bisphenol A (BPA) is particularly considered as one of the most suspicious endocrine disruptors. Exposure to BPA may bring about possible human toxicities, such as cancerous tumors, birth defects and neoteny. One of the key issues to understand its toxicities is how BPA enters cells. In this paper, we perform molecular dynamics simulations to explore the interactions between BPA and a phospholipid membrane (dipalmitoylphosphatidylcholine, DPPC bilayer). The simulation results show that BPA can easily enter the membrane from the aqueous phase. With the increasing concentrations of BPA in the membrane, BPA tends to aggregate and form into cluster. Meanwhile, several DPPC lipids are pulled out from each leaflet and adsorbed on the cluster surface, leading to pore formation. Detailed observations indicate that the lipid extraction results mainly from the dispersion interactions between BPA cluster and lipid tails, as well as weak electrostatic attractions between lipid headgroups and the two hydroxyl groups on BPA. The lipid extraction and pore formation may cause cell membrane damage and are of great importance to uncover BPA's cytotoxicity. PMID:27629233

  19. Dynamics, Fluxes, Stability, Succession and Landscape Formation in Cold Environments: The DYNAFLUX / DYNACOLD Network

    Science.gov (United States)

    Beylich, Achim A.

    2015-04-01

    Within Europe there is a wide array of high-latitude and high-altitude landscapes, covering a significant proportion of the total land area. These defined cold climate landscapes represent a variety of stages of deglaciation history and landscape formation. We find landscapes at different levels of postglacial stabilization, providing the unique opportunity to study the interactions between geo-, bio-, social and socio-economic systems at the land surface. The DYNAFLUX / DYNACOLD Network (2004 - ) bridges across the geo-, bio-, social and socio-economic sciences in order to investigate the complex dynamics of stabilization, succession and landscape formation during and after ice retreat and under human impact. The Network provides a multidisciplinary forum where research groups come together. It is linking and integrating a number of networks and programs and creates an umbrella program and a forum for sharing knowledge. The focus of this network is relevant for different end users, including risk and vulnerability assessment, sustainable land use, land management and conservation. Also questions closely related to Global Change like, e.g., hazards, permafrost degradation, loss of biodiversity are addressed.

  20. Nonlinear dynamics of pattern formation and pattern recognition in the rabbit olfactory bulb

    Science.gov (United States)

    Baird, Bill

    1986-10-01

    A mathematical model of the process of pattern recognition in the first olfactory sensory cortex of the rabbit is presented. It explains the formation and alteration of spatial patterns in neural activity observed experimentally during classical Pavlovian conditioning. On each inspiration of the animal, a surge of receptor input enters the olfactory bulb. EEG activity recorded at the surface of the bulb undergoes a transition from a low amplitude background state of temporal disorder to coherent oscillation. There is a distinctive spatial pattern of rms amplitude in this oscillation which changes reliably to a second pattern during each successful recognition by the animal of a conditioned stimulus odor. When a new odor is paired as conditioned stimulus, these patterns are replaced by new patterns that stabilize as the animal adapts to the new environment. I will argue that a unification of the theories of pattern formation and associative memory is required to account for these observations. This is achieved in a model of the bulb as a discrete excitable medium with spatially inhomogeneous coupling expressed by a connection matrix. The theory of multiple Hopf bifurcations is employed to find coupled equations for the amplitudes of competing unstable oscillatory modes. These may be created in the system by proper coupling and selectively evoked by specific classes of inputs. This allows a view of limit cycle attractors as “stored” fixed points of a gradient vector field and thereby recovers the more familiar dynamical systems picture of associative memory.

  1. Sensitivity study of fluid dynamic effects on nitric oxide formation in CFB combustion of wood

    Energy Technology Data Exchange (ETDEWEB)

    Kallio, S.; Kilpinen, P.; Konttinen, J. [Abo Akademi Univ., Turku (Finland); Leckner, B.; Armand, L.E. [Chalmers Univ. of Technology, Goteborg (Sweden)

    2002-07-01

    The type of fuel and operating conditions in circulating fluidized bed combustion (CFBC) can vary widely. Potential fuels include coals, biofuels and wastes. The use of biofuels as an energy source has stimulated much interest around the world, but the nitric oxide (NO) emissions from CFB combustion of wood is of the same order of magnitude as from combustion of coal with high N content. This paper presents a newly developed 1.5D numerical model that examines the formation of NO and nitrous oxide (N{sub 2}O) emissions in a CFBC under varying operating conditions and different fuel types. A comprehensive kinetic scheme was used for the homogeneous chemistry and a single particle model for char combustion. Gas mixing and release of volatiles were the fluid dynamic factors that were examined for wood combustion under normal air staging conditions. The formation of high NO emissions from wood burning was found to depend greatly on the pattern of volatile releases as well as the mixing of secondary air and gas. Nitric oxide was found to form higher in the riser during wood combustion compared to coal combustion. The large amount of char at the bottom of the bed is an important source of nitric oxide. 14 refs., 1 tab., 8 figs.

  2. The role of loop stacking in the dynamics of DNA hairpin formation

    CERN Document Server

    Mosayebi, Majid; Ouldridge, Thomas E; Louis, Ard A; Doye, Jonathan P K

    2014-01-01

    We study the dynamics of DNA hairpin formation using oxDNA, a nucleotide-level coarse-grained model of DNA. In particular, we explore the effects of the loop stacking interactions and non-native base pairing on the hairpin closing times. We find a non-monotonic variation of the hairpin closing time with temperature, in agreement with the experimental work of Wallace et al. [Proc. Nat. Acad. Sci. USA 2001, 98, 5584-5589]. The hairpin closing process involves the formation of an initial nucleus of one or two bonds between the stems followed by a rapid zippering of the stem. At high temperatures, typically above the hairpin melting temperature, an effective negative activation enthalpy is observed because the nucleus has a lower enthalpy than the open state. By contrast, at low temperatures, the activation enthalpy becomes positive mainly due to the increasing energetic cost of bending a loop that becomes increasingly highly stacked as the temperature decreases. We show that stacking must be very strong to induc...

  3. The role of reconsolidation and the dynamic process of long-term memory formation and storage

    Directory of Open Access Journals (Sweden)

    Cristina M Alberini

    2011-03-01

    Full Text Available It is becoming increasingly clear that the processes of memory formation and storage are exquisitely dynamic. Elucidating the nature and temporal evolution of the biological changes that accompany encoding, storage and retrieval is key to understand memory formation. For explicit or medial temporal lobe-dependent memories that form after a discrete event and are stored for a long time, the physical changes underlying the encoding and processing of the information (memory trace or engram remain in a fragile state for some time. However, over time, the new memory becomes increasingly resistant to disruption until it is consolidated. Retrieval or reactivation of an apparently consolidated memory can render the memory labile again, and reconsolidation is the process that occurs to mediate its restabilization. Reconsolidation also evolves with the age of the memory: Young memories are sensitive to postreactivation disruption, but older memories are more resistant. Why does a memory become labile again if it is retrieved or reactivated? Here I suggest that the main function of reconsolidation is to contribute to the lingering consolidation process and mediate memory strengthening. I also discuss the literature and results regarding the influence of the passage of time on the reconsolidation of memory. These points have important implications for the use of reconsolidation in therapeutic settings.

  4. The DYNAFLUX / DYNACOLD Network: Dynamics, Fluxes, Stability, Succession and Landscape Formation in Cold Climate Environments

    Science.gov (United States)

    Beylich, Achim A.

    2016-04-01

    There is a wide range of high-latitude and high-altitude cold climate landscapes in Europe, covering a significant proportion of the total land surface area. This spectrum of defined cold climate landscapes represents a variety of stages of deglaciation history and landscape formation. We can find landscapes at different levels of postglacial stabilization which is providing the opportunity to study the interactions between geo-, bio-, social and socio-economic systems at the land surface. The DYNAFLUX / DYNACOLD Network (2004-) bridges across the geo-, bio-, social and socio-economic sciences in order to analyze the complex dynamics of stabilization, succession and landscape formation during and after ice retreat and under ongoing human influences. The network provides a multidisciplinary forum where researchers come together. In addition, it is linking a number of networks, working groups and programs and creates an umbrella network and a forum for sharing knowledge. The scientific focus of this network is also relevant for different end users, including risk and vulnerability assessment, sustainable land use, land management and conservation. In addition, key questions related to Global Change like, e.g., hazards, permafrost degradation and loss of biodiversity are discussed.

  5. Star formation properties and dynamics of Luminous Infrared Galaxies with adaptive optics

    CERN Document Server

    Vaisanen, Petri; Ryder, Stuart

    2009-01-01

    Near infrared adaptive optics observations are crucial to be able to interpret kinematic and dynamical data and study star formation properties within the often extremely dusty interacting luminous IR galaxies (LIRGs). NIR AO data are also needed to find supernovae in their bright and dusty central regions and to fully characterize the young stellar clusters found in these kinds of systems. We have used AO in the K-band to survey a sample of LIRGs at 0.1 arcsec (30 to 100 pc) resolution. The data are merged with SALT and AAT spectroscopic follow-up and HST and Spitzer archival imaging. The first AO detected SNe are reported as well as details of the first studied LIRGs. One LIRG showed an unexpected third component in the interaction, which moreover turned out to host the most active star formation. Another target showed evidence in the NIR of a very rare case of leading spiral arms, rotating in the same direction as the arms open.

  6. Mechanism underlying formation of SSC in optical glass due to dynamic impact of single diamond scratch

    Institute of Scientific and Technical Information of China (English)

    陈江; 赵航; 张飞虎; 张元晶; 张勇

    2015-01-01

    During the grinding of optical glass, the abrasion directly affects the morphology and depth of subsurface cracks (SSC). The effect of dynamic impact of grinding abrasives on optical glass is an important issue in the field of optics manufacturing. In this work, a single diamond scratch was used to grind optical glass, and grinding parameters were collaboratively controlled to ensure that the cutting layer remained constant. A dynamometer was used to record the duration of the impact process, and the cross-section of the test piece was polished for scanning electron microscopy (SEM) to determine the depth of the SSCs. The experimental results show that as wheel speed increases, SSC depth tends to decrease. When the wheel speed gradually increases from 500 r/min to 2500 r/min, the probability distribution curve for the maximum SSC depth shifts downward by around 80 µm. The effect of the dynamic impact of single diamond scratch is found to be an important cause of SSC formation in optical glass during grinding, i.e., the faster the grinding, the shallower the SSCs.

  7. A triphasic constrained mixture model of engineered tissue formation under in vitro dynamic mechanical conditioning.

    Science.gov (United States)

    Soares, Joao S; Sacks, Michael S

    2016-04-01

    While it has become axiomatic that mechanical signals promote in vitro engineered tissue formation, the underlying mechanisms remain largely unknown. Moreover, efforts to date to determine parameters for optimal extracellular matrix (ECM) development have been largely empirical. In the present work, we propose a two-pronged approach involving novel theoretical developments coupled with key experimental data to develop better mechanistic understanding of growth and development of dense connective tissue under mechanical stimuli. To describe cellular proliferation and ECM synthesis that occur at rates of days to weeks, we employ mixture theory to model the construct constituents as a nutrient-cell-ECM triphasic system, their transport, and their biochemical reactions. Dynamic conditioning protocols with frequencies around 1 Hz are described with multi-scale methods to couple the dissimilar time scales. Enhancement of nutrient transport due to pore fluid advection is upscaled into the growth model, and the spatially dependent ECM distribution describes the evolving poroelastic characteristics of the scaffold-engineered tissue construct. Simulation results compared favorably to the existing experimental data, and most importantly, distinguish between static and dynamic conditioning regimes. The theoretical framework for mechanically conditioned tissue engineering (TE) permits not only the formulation of novel and better-informed mechanistic hypothesis describing the phenomena underlying TE growth and development, but also the exploration/optimization of conditioning protocols in a rational manner. PMID:26055347

  8. Protein complex formation and intranuclear dynamics of NAC1 in cancer cells.

    Science.gov (United States)

    Nakayama, Naomi; Kato, Hiroaki; Sakashita, Gyosuke; Nariai, Yuko; Nakayama, Kentaro; Kyo, Satoru; Urano, Takeshi

    2016-09-15

    Nucleus accumbens-associated protein 1 (NAC1) is a cancer-related transcription regulator protein that is also involved in the pluripotency and differentiation of embryonic stem cells. NAC1 is overexpressed in various carcinomas including ovarian, cervical, breast, and pancreatic carcinomas. NAC1 knock-down was previously shown to result in the apoptosis of ovarian cancer cell lines and to rescue their sensitivity to chemotherapy, suggesting that NAC1 may be a potential therapeutic target, but protein complex formation and the dynamics of intranuclear NAC1 in cancer cells remain poorly understood. In this study, analysis of HeLa cell lysates by fast protein liquid chromatography (FPLC) on a sizing column showed that the NAC1 peak corresponded to an apparent molecular mass of 300-500 kDa, which is larger than the estimated molecular mass (58 kDa) of the protein. Furthermore, live cell photobleaching analyses with green fluorescent protein (GFP)-fused NAC1 proteins revealed the intranuclear dynamics of NAC1. Collectively our results demonstrate that NAC1 forms a protein complex to function as a transcriptional regulator in cancer cells.

  9. A Fuzzy Programming approach for formation of Virtual Cells under dynamic and uncertain conditions

    Directory of Open Access Journals (Sweden)

    R.Jayachitra,

    2010-06-01

    Full Text Available Inspired by principles and advantages of the group technology (GT philosophy, part family formation for a virtual Cellular Manufacturing System (VCMS using Fuzzy logic is designed for dynamic and uncertain conditions. In real manufacturing systems, the input parameters such as part demand and the capacity are fuzzy in nature. In such cases, the fluctuations in part demand and the availability of manufacturing facilities in each period can be regarded as fuzzy. In a dynamic environment, the planning horizon can be divided into smaller time periods where each period and/or each part has different product mix and demand. A mathematical model for virtual cellular manufacturing system as binary-integer programming is proposed to minimize the total costs consisting of fixed machine costs, variable costs of all machines and the logical group movement costs. To verify the behavior of the proposed model, a comprehensive example is solved by a branch- and-bound (B&B method with the LINGO 12.0 software and the virtual cells(VC are formed by defuzzification using maximizing decision level λ (lambda-cut and the computational results are reported and compared with simulated annealing algorithm and rank order clustering algorithm .

  10. Protein complex formation and intranuclear dynamics of NAC1 in cancer cells.

    Science.gov (United States)

    Nakayama, Naomi; Kato, Hiroaki; Sakashita, Gyosuke; Nariai, Yuko; Nakayama, Kentaro; Kyo, Satoru; Urano, Takeshi

    2016-09-15

    Nucleus accumbens-associated protein 1 (NAC1) is a cancer-related transcription regulator protein that is also involved in the pluripotency and differentiation of embryonic stem cells. NAC1 is overexpressed in various carcinomas including ovarian, cervical, breast, and pancreatic carcinomas. NAC1 knock-down was previously shown to result in the apoptosis of ovarian cancer cell lines and to rescue their sensitivity to chemotherapy, suggesting that NAC1 may be a potential therapeutic target, but protein complex formation and the dynamics of intranuclear NAC1 in cancer cells remain poorly understood. In this study, analysis of HeLa cell lysates by fast protein liquid chromatography (FPLC) on a sizing column showed that the NAC1 peak corresponded to an apparent molecular mass of 300-500 kDa, which is larger than the estimated molecular mass (58 kDa) of the protein. Furthermore, live cell photobleaching analyses with green fluorescent protein (GFP)-fused NAC1 proteins revealed the intranuclear dynamics of NAC1. Collectively our results demonstrate that NAC1 forms a protein complex to function as a transcriptional regulator in cancer cells. PMID:27424155

  11. Plasma formation and dynamics in conical wire arrays in the Llampudken pulsed power generator

    Energy Technology Data Exchange (ETDEWEB)

    Muñoz, C. Gonzalo, E-mail: gamunoz2f@uc.cl, E-mail: fveloso@fis.puc.cl; Valenzuela, Vicente, E-mail: gamunoz2f@uc.cl, E-mail: fveloso@fis.puc.cl; Veloso, Felipe, E-mail: gamunoz2f@uc.cl, E-mail: fveloso@fis.puc.cl; Favre, Mario, E-mail: gamunoz2f@uc.cl, E-mail: fveloso@fis.puc.cl; Wyndham, Edmund, E-mail: gamunoz2f@uc.cl, E-mail: fveloso@fis.puc.cl [Instituto de Física, Pontificia Universidad Católica de Chile, Av. Vicuña Mackenna 4860, Santiago (Chile)

    2014-12-15

    Plasma formation and dynamics from conical wire array is experimentally studied. Ablation from the wires is observed, forming plasma accumulation at the array axis and subsequently a jet outflow been expelled toward the top of the array. The arrays are composed by 16 equally spaced 25μ diameter tungsten wires. Their dimensions are 20mm height, with base diameters of 8mm and 16mm top diameter. The array loads are design to be overmassed, hence no complete ablation of the wires is observed during the current rise. The experiments have been carried out in the Llampudken. pulsed power generator (∼350kA in ∼350ns). Plasma dynamics is studied in both side-on and end-on directions. Laser probing (shadowgraphy) is achieved using a frequency doubled Nd:YAG laser (532nm, 12ps FWHM) captured by CCD cameras. Pinhole XUV imaging is captured using gated microchannel plate cameras with time resolution ∼5ns. Results on the jet velocity and the degree of collimation indicating the plausibility on the use of these jets as comparable to the study astrophysically produced jets are presented and discussed.

  12. Mechanism underlying formation of SSC in optical glass due to dynamic impact of single diamond scratch

    Institute of Scientific and Technical Information of China (English)

    陈江; 赵航; 张飞虎; 张元晶; 张勇

    2015-01-01

    During the grinding of optical glass, the abrasion directly affects the morphology and depth of subsurface cracks(SSC). The effect of dynamic impact of grinding abrasives on optical glass is an important issue in the field of optics manufacturing. In this work, a single diamond scratch was used to grind optical glass, and grinding parameters were collaboratively controlled to ensure that the cutting layer remained constant. A dynamometer was used to record the duration of the impact process, and the cross-section of the test piece was polished for scanning electron microscopy(SEM) to determine the depth of the SSCs. The experimental results show that as wheel speed increases, SSC depth tends to decrease. When the wheel speed gradually increases from 500 r/min to 2500 r/min, the probability distribution curve for the maximum SSC depth shifts downward by around 80 μm. The effect of the dynamic impact of single diamond scratch is found to be an important cause of SSC formation in optical glass during grinding, i.e., the faster the grinding, the shallower the SSCs.

  13. Dynamic model based on voltage transfer curve for pattern formation in dielectric barrier glow discharge

    Science.gov (United States)

    Li, Ben; He, Feng; Duan, Xiaoxi; Ouyang, Jiting

    2015-12-01

    Simulation work is very important for understanding the formation of self-organized discharge patterns. Previous works have witnessed different models derived from other systems for simulation of discharge pattern, but most of these models are complicated and time-consuming. In this paper, we introduce a convenient phenomenological dynamic model based on the basic dynamic process of glow discharge and the voltage transfer curve (VTC) to study the dielectric barrier glow discharge (DBGD) pattern. VTC is an important characteristic of DBGD, which plots the change of wall voltage after a discharge as a function of the initial total gap voltage. In the modeling, the combined effect of the discharge conditions is included in VTC, and the activation-inhibition effect is expressed by a spatial interaction term. Besides, the model reduces the dimensionality of the system by just considering the integration effect of current flow. All these greatly facilitate the construction of this model. Numerical simulations turn out to be in good accordance with our previous fluid modeling and experimental result.

  14. Dynamic model based on voltage transfer curve for pattern formation in dielectric barrier glow discharge

    Energy Technology Data Exchange (ETDEWEB)

    Li, Ben; He, Feng; Ouyang, Jiting, E-mail: jtouyang@bit.edu.cn [School of Physics, Beijing Institute of Technology, Beijing 100081 (China); Duan, Xiaoxi [Research Center of Laser Fusion, CAEP, Mianyang 621900 (China)

    2015-12-15

    Simulation work is very important for understanding the formation of self-organized discharge patterns. Previous works have witnessed different models derived from other systems for simulation of discharge pattern, but most of these models are complicated and time-consuming. In this paper, we introduce a convenient phenomenological dynamic model based on the basic dynamic process of glow discharge and the voltage transfer curve (VTC) to study the dielectric barrier glow discharge (DBGD) pattern. VTC is an important characteristic of DBGD, which plots the change of wall voltage after a discharge as a function of the initial total gap voltage. In the modeling, the combined effect of the discharge conditions is included in VTC, and the activation-inhibition effect is expressed by a spatial interaction term. Besides, the model reduces the dimensionality of the system by just considering the integration effect of current flow. All these greatly facilitate the construction of this model. Numerical simulations turn out to be in good accordance with our previous fluid modeling and experimental result.

  15. The poleward edge of the mid-latitude trough - Its formation, orientation and dynamics

    Science.gov (United States)

    Rodger, A. S.; Brace, L. H.; Hoegy, W. R.; Winningham, J. D.

    1986-08-01

    Data from the Advanced Ionospheric Sounder (AIS) deployed at Halley, Antarctica (76-deg S, 27-deg W; L = 4.2) and the Dynamics Explorer-2 spacecraft (DE-2) are used to investigate several aspects of the formation processes and dynamics of the poleward edge of the midlatitude electron density trough. These include a study of the flux and energy of charged particles precipitating into the F-region as a function of Magnetic Local Time. It is found that local energetic electron precipitation is a major source of ionization of the poleward edge in the evening sector, but only after magnetic midnight transport processes become more important. Occasionally a significant increase in the flux of conjugate photoelectrons is colocated with the poleward edge of the trough in the morning sector. The combination of AIS and DE-2 data has allowed identification of significant longitudinal structure on the poleward edge of the trough that may be the result of substorm activity. It is found that the orientation of the poleward edge of the trough and the locus of the plasmapause predicted from the 'tear-drop' model vary in rather a similar manner with local time, though no close physical link between the two features is inferred from this coincidence.

  16. Self-propelled worm-like filaments: spontaneous spiral formation, structure, and dynamics.

    Science.gov (United States)

    Isele-Holder, Rolf E; Elgeti, Jens; Gompper, Gerhard

    2015-09-28

    Worm-like filaments that are propelled homogeneously along their tangent vector are studied by Brownian dynamics simulations. Systems in two dimensions are investigated, corresponding to filaments adsorbed to interfaces or surfaces. A large parameter space covering weak and strong propulsion, as well as flexible and stiff filaments is explored. For strongly propelled and flexible filaments, the free-swimming filaments spontaneously form stable spirals. The propulsion force has a strong impact on dynamic properties, such as the rotational and translational mean square displacement and the rate of conformational sampling. In particular, when the active self-propulsion dominates thermal diffusion, but is too weak for spiral formation, the rotational diffusion coefficient has an activity-induced contribution given by v(c)/ξ(P), where v(c) is the contour velocity and ξ(P) the persistence length. In contrast, structural properties are hardly affected by the activity of the system, as long as no spirals form. The model mimics common features of biological systems, such as microtubules and actin filaments on motility assays or slender bacteria, and artificially designed microswimmers. PMID:26256415

  17. The impact of turbulence and phytoplankton dynamics on foam formation, seawater viscosity and chlorophyll concentration in the eastern English Channel

    Directory of Open Access Journals (Sweden)

    Irma Kesaulya

    2008-06-01

    Full Text Available The space-time dynamics of chlorophyll a concentration and seawater excess viscosity has been investigated in the hydrographically contrasting inshore and offshore water masses of the eastern English Channel. This was done during the phytoplankton spring bloom dominated by Phaeocystis globosa before and after the very large-scale formation of foam induced by an increase in wind-driven turbulence and the related wave breakings. The results suggest that the dynamics of chlorophyll a concentration and seawater excess viscosity are differentially controlled by the formation of foam through the intensity of the spring bloom and wind-generated turbulence.

  18. Dynamics and neutrino signal of black hole formation in non-rotating failed supernovae. II. progenitor dependence

    OpenAIRE

    Sumiyoshi, K.; Yamada, S; Suzuki, H.

    2008-01-01

    We study the progenitor dependence of the black hole formation and its associated neutrino signals from the gravitational collapse of non-rotating massive stars, following the preceding study on the single progenitor model in Sumiyoshi et al. (2007). We aim to clarify whether the dynamical evolution toward the black hole formation occurs in the same manner for different progenitors and to examine whether the characteristic of neutrino bursts is general having the short duration and the rapidl...

  19. Comparative dynamics of retrograde actin flow and focal adhesions: formation of nascent adhesions triggers transition from fast to slow flow.

    Directory of Open Access Journals (Sweden)

    Antonina Y Alexandrova

    Full Text Available Dynamic actin network at the leading edge of the cell is linked to the extracellular matrix through focal adhesions (FAs, and at the same time it undergoes retrograde flow with different dynamics in two distinct zones: the lamellipodium (peripheral zone of fast flow, and the lamellum (zone of slow flow located between the lamellipodium and the cell body. Cell migration involves expansion of both the lamellipodium and the lamellum, as well as formation of new FAs, but it is largely unknown how the position of the boundary between the two flow zones is defined, and how FAs and actin flow mutually influence each other. We investigated dynamic relationship between focal adhesions and the boundary between the two flow zones in spreading cells. Nascent FAs first appeared in the lamellipodium. Within seconds after the formation of new FAs, the rate of actin flow decreased locally, and the lamellipodium/lamellum boundary advanced towards the new FAs. Blocking fast actin flow with cytochalasin D resulted in rapid dissolution of nascent FAs. In the absence of FAs (spreading on poly-L-lysine-coated surfaces retrograde flow was uniform and the velocity transition was not observed. We conclude that formation of FAs depends on actin dynamics, and in its turn, affects the dynamics of actin flow by triggering transition from fast to slow flow. Extension of the cell edge thus proceeds through a cycle of lamellipodium protrusion, formation of new FAs, advance of the lamellum, and protrusion of the lamellipodium from the new base.

  20. Comparative dynamics of retrograde actin flow and focal adhesions: formation of nascent adhesions triggers transition from fast to slow flow.

    Science.gov (United States)

    Alexandrova, Antonina Y; Arnold, Katya; Schaub, Sébastien; Vasiliev, Jury M; Meister, Jean-Jacques; Bershadsky, Alexander D; Verkhovsky, Alexander B

    2008-01-01

    Dynamic actin network at the leading edge of the cell is linked to the extracellular matrix through focal adhesions (FAs), and at the same time it undergoes retrograde flow with different dynamics in two distinct zones: the lamellipodium (peripheral zone of fast flow), and the lamellum (zone of slow flow located between the lamellipodium and the cell body). Cell migration involves expansion of both the lamellipodium and the lamellum, as well as formation of new FAs, but it is largely unknown how the position of the boundary between the two flow zones is defined, and how FAs and actin flow mutually influence each other. We investigated dynamic relationship between focal adhesions and the boundary between the two flow zones in spreading cells. Nascent FAs first appeared in the lamellipodium. Within seconds after the formation of new FAs, the rate of actin flow decreased locally, and the lamellipodium/lamellum boundary advanced towards the new FAs. Blocking fast actin flow with cytochalasin D resulted in rapid dissolution of nascent FAs. In the absence of FAs (spreading on poly-L-lysine-coated surfaces) retrograde flow was uniform and the velocity transition was not observed. We conclude that formation of FAs depends on actin dynamics, and in its turn, affects the dynamics of actin flow by triggering transition from fast to slow flow. Extension of the cell edge thus proceeds through a cycle of lamellipodium protrusion, formation of new FAs, advance of the lamellum, and protrusion of the lamellipodium from the new base. PMID:18800171

  1. IUTAM Symposium on Vortex Dynamics: Formation, Structure and Function, 10-14 March 2013, Fukuoka, Japan

    Science.gov (United States)

    Fukumoto, Yasuhide

    2014-06-01

    This special issue of Fluid Dynamics Research contains the first of a two-part publication of the papers presented at the IUTAM Symposium on Vortex Dynamics: Formation, Structure and Function, held at the Centennial Hall, Kyushu University School of Medicine, Fukuoka, Japan, during the week of 10-14 March 2013. Vortices are ubiquitous structures in fluid mechanics spanning the range of scales from nanofluidics and microfluidics to geophysical and astrophysical flows. Vortices are the key to understanding many different phenomena. As a result, the subject of vortex dynamics continues to evolve and to constantly find new applications in biology, biotechnology, industrial and environmental problems. Vortices can be created by the separation of a flow from the surface of a body or at a density interface, and evolve into coherent structures. Once formed, a vortex acquires a function, depending on its individual structure. In this way, for example, insects gain lift and fish gain thrust. Surprisingly, despite the long history of vortex dynamics, only recently has knowledge about formation, structure and function of vortices been combined to yield new perspectives in the subject, thereby helping to solve outstanding problems brought about by modern advances in computer technology and improved experimental techniques. This symposium is a continuation, five years on, of the IUTAM Symposium '50 Years of Vortex Dynamics', Lyngby, Denmark that took place between 12-16 October 2008, organized by the late Professor Hassan Aref. Originally, Professor Aref was a member of the International Scientific Committee of this symposium and offered his enthusiasm and great expertise, to support its organization. To our shock, he suddenly passed away on 9 September 2011. Furthermore, Professor Slava Meleshko, a leading scientist of fluid and solid mechanics and an intimate friend of Professor Aref, was expected to make an eminent contribution to the symposium. Soon after this sad loss

  2. Dynamics of Mantle Circulation Associated with Slab Window Formation: Insights from 3D Laboratory Models

    Science.gov (United States)

    Guillaume, B.; Funiciello, F.; Moroni, M.; Faccenna, C.; Martinod, J.

    2009-12-01

    Slab window can form either by the intersection of a spreading ridge with a subduction zone or because of internal deformation of the slab that leads to its disruption. The main consequences of this phenomenon are the modifications of the physical, chemical and thermal conditions in the backarc mantle that in turn affect the tectonic and magmatic evolution of the overriding plate. We performed laboratory models of a two-layer linear viscous slab (silicone putty)-upper mantle (glucose syrup) system to quantitatively investigate the pattern of mantle circulation within the slab window (using Feature Tracking image analysis technique) and its influence on the kinematics of the system. Two different geometries have been tested considering a window located (a) at slab edges or (b) within the slab. Kinematic consequences of slab window have been explored to understand the dynamics of the mantle-slab interaction. Configuration (a) implies a reduction of the slab width (W) during subduction and is characterized by toroidal fluxes around the slab edges. The abrupt opening of lateral slab windows produces an acceleration of the trench retreat and subduction velocity, such as 40% for a three-fold width reduction. We interpret this behavior as mostly due to the decrease in the toroidal flow inside subduction windows, scaling with W2. Configuration (b) has been designed to explore the pattern of mantle flow within the window in the case of a laterally constrained subduction system. Slab window, which had a width (Ww) fixed to 15 % of the slab width, opened in the trench-perpendicular direction. It produced the formation of two toroidal mantle cells, centered on the slab midpoint and laterally growing as the slab window enlarged. Particles extruded through the slab window did not mix with particles located in the mantle wedge, the boundary between both reaching distances from the trench up to 3×Ww in the trench-perpendicular direction, and up to 1.5×Ww from the window edge in

  3. Dynamic coupling of pattern formation and morphogenesis in the developing vertebrate retina.

    Science.gov (United States)

    Picker, Alexander; Cavodeassi, Florencia; Machate, Anja; Bernauer, Sabine; Hans, Stefan; Abe, Gembu; Kawakami, Koichi; Wilson, Stephen W; Brand, Michael

    2009-10-01

    During embryonic development, pattern formation must be tightly synchronized with tissue morphogenesis to coordinate the establishment of the spatial identities of cells with their movements. In the vertebrate retina, patterning along the dorsal-ventral and nasal-temporal (anterior-posterior) axes is required for correct spatial representation in the retinotectal map. However, it is unknown how specification of axial cell positions in the retina occurs during the complex process of early eye morphogenesis. Studying zebrafish embryos, we show that morphogenetic tissue rearrangements during eye evagination result in progenitor cells in the nasal half of the retina primordium being brought into proximity to the sources of three fibroblast growth factors, Fgf8/3/24, outside the eye. Triple-mutant analysis shows that this combined Fgf signal fully controls nasal retina identity by regulating the nasal transcription factor Foxg1. Surprisingly, nasal-temporal axis specification occurs very early along the dorsal-ventral axis of the evaginating eye. By in vivo imaging GFP-tagged retinal progenitor cells, we find that subsequent eye morphogenesis requires gradual tissue compaction in the nasal half and directed cell movements into the temporal half of the retina. Balancing these processes drives the progressive alignment of the nasal-temporal retina axis with the anterior-posterior body axis and is controlled by a feed-forward effect of Fgf signaling on Foxg1-mediated cell cohesion. Thus, the mechanistic coupling and dynamic synchronization of tissue patterning with morphogenetic cell behavior through Fgf signaling leads to the graded allocation of cell positional identity in the eye, underlying retinotectal map formation. PMID:19823566

  4. Dynamic Processes of Altered Layer Formation in Cu-Pt Alloys Under Ion Bombardment

    Science.gov (United States)

    Li, Chunfei; Asahata, Tatsuya; Shimizu, Ryuichi

    Three different experimental approaches have been developed to study the dynamic process of subsurface altered layer formation in a Cu-Pt alloy under Ar+ ion bombardment: (1) sputter neutral mass spectrometry by multiphoton ionization (MPI-SNMS) for the study of preferential sputtering caused by the collision cascade process in the very initial stage of sputtering; (2) ion scattering spectroscopy (ISS)-Auger electron spectroscopy (AES) sequential measurements for investigating radiation-enhanced Gibbsian segregation in the transient stage of sputtering; (3) an approach based on ISS monitoring by prompt switching of the ion bombardment with (He++Ar+) ions to that with He+ ions, for revealing the cooling effect in radiation-enhanced diffusion in the final steady state of sputtering. For this we have developed a specific coevaporating device for depositing Cu and Pt simultaneously on a substrate at constant deposition rate. The coevaporating device was attached to both of the specimen chambers of the Auger microprobe, JAMP-3, and of the MPI-SNMS apparatus. The results have clearly revealed: (i) ion bombardment causes a preferential sputtering of Cu atoms in the very initial stage of sputtering, (ii) followed by gradual formation of an altered layer as ion sputtering proceeds in the transient stage, and (iii) finally the alloy system approaches a steady state where the composition profile is controlled by cascade mixing, radiation-enhanced Gibbsian segregation and radiation-enhanced diffusion to satisfy the mass balance law. In the steady state the approach (3) has, first, revealed that the cooling effect does exist in radiation-enhanced diffusion.

  5. Dynamics of protein aggregation and oligomer formation governed by secondary nucleation

    Energy Technology Data Exchange (ETDEWEB)

    Michaels, Thomas C. T., E-mail: tctm3@cam.ac.uk; Lazell, Hamish W.; Arosio, Paolo; Knowles, Tuomas P. J., E-mail: tpjk2@cam.ac.uk [Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW (United Kingdom)

    2015-08-07

    The formation of aggregates in many protein systems can be significantly accelerated by secondary nucleation, a process where existing assemblies catalyse the nucleation of new species. In particular, secondary nucleation has emerged as a central process controlling the proliferation of many filamentous protein structures, including molecular species related to diseases such as sickle cell anemia and a range of neurodegenerative conditions. Increasing evidence suggests that the physical size of protein filaments plays a key role in determining their potential for deleterious interactions with living cells, with smaller aggregates of misfolded proteins, oligomers, being particularly toxic. It is thus crucial to progress towards an understanding of the factors that control the sizes of protein aggregates. However, the influence of secondary nucleation on the time evolution of aggregate size distributions has been challenging to quantify. This difficulty originates in large part from the fact that secondary nucleation couples the dynamics of species distant in size space. Here, we approach this problem by presenting an analytical treatment of the master equation describing the growth kinetics of linear protein structures proliferating through secondary nucleation and provide closed-form expressions for the temporal evolution of the resulting aggregate size distribution. We show how the availability of analytical solutions for the full filament distribution allows us to identify the key physical parameters that control the sizes of growing protein filaments. Furthermore, we use these results to probe the dynamics of the populations of small oligomeric species as they are formed through secondary nucleation and discuss the implications of our work for understanding the factors that promote or curtail the production of these species with a potentially high deleterious biological activity.

  6. Vortex formation in coalescence of droplets with a reservoir using molecular dynamics simulations.

    Science.gov (United States)

    Taherian, Fereshte; Marcon, Valentina; Bonaccurso, Elmar; van der Vegt, Nico F A

    2016-10-01

    The flow patterns generated by the coalescence of aqueous ethanol droplets with a water reservoir are investigated using molecular dynamics simulations. The influence of surface tension gradient, which leads to the spreading of the droplet along the liquid-vapor interface of the reservoir, is studied by changing the ethanol concentration of the droplet. The internal circulation (vortex strength) of the droplet and the reservoir are analyzed separately. Simulation results reveal the formation of swirling flows within the droplet at early times when the radius of the coalescence neck due to the capillary forces increases rapidly with time. The vortex strength is found to be higher at lower concentrations of ethanol (higher liquid-vapor surface tension of the droplet), where the driving force for the contact line movement (capillary force) is stronger. The circulation diminishes by moving the center of mass of the droplet toward the reservoir. The lower surface tension of the droplet compared to the reservoir leads to surface tension gradient driven flow, which transports the droplet molecules along the liquid-vapor interface of the reservoir. Such a flow motion results in the generation of convective flows in the underlying water, which forms swirling flows within the reservoir. Therefore, the vortex strength of the reservoir is higher at higher ethanol concentrations of the droplet. The reservoir circulation decays to zero as soon as the ethanol concentration becomes homogeneous along the interface of the pool. The time evolution of circulation within the droplet and the reservoir are correlated with the center of mass motion of the droplet toward the surface, the time variation of the precursor film radius and the dynamic surface tension of the reservoir. PMID:27388133

  7. Molecular dynamics of wetting layer formation and forced water invasion in angular nanopores with mixed wettability

    International Nuclear Information System (INIS)

    The depletion of conventional hydrocarbon reservoirs has prompted the oil and gas industry to search for unconventional resources such as shale gas/oil reservoirs. In shale rocks, considerable amounts of hydrocarbon reside in nanoscale pore spaces. As a result, understanding the multiphase flow of wetting and non-wetting phases in nanopores is important to improve oil and gas recovery from these formations. This study was designed to investigate the threshold capillary pressure of oil and water displacements in a capillary dominated regime inside nanoscale pores using nonequilibrium molecular dynamics (NEMD) simulations. The pores have the same cross-sectional area and volume but different cross-sectional shapes. Oil and water particles were represented with a coarse grained model and the NEMD simulations were conducted by assigning external pressure on an impermeable piston. Threshold capillary pressures were determined for the drainage process (water replaced by oil) in different pores. The molecular dynamics results are in close agreements with calculations using the Mayer-Stowe-Princen (MS-P) method which has been developed on the premise of energy balance in thermodynamic equilibrium. After the drainage simulations, a change in wall particles’ wettability from water-wet to oil-wet was implemented based on the final configuration of oil and water inside the pore. Waterflooding simulations were then carried out at the threshold capillary pressure. The results show that the oil layer formed between water in the corner and in the center of the pore is not stable and collapses as the simulation continues. This is in line with the predictions from the MS-P method

  8. Molecular dynamics of wetting layer formation and forced water invasion in angular nanopores with mixed wettability

    Energy Technology Data Exchange (ETDEWEB)

    Sedghi, Mohammad, E-mail: msedghi@uwyo.edu; Piri, Mohammad; Goual, Lamia [Department of Chemical and Petroleum Engineering, University of Wyoming, 1000 East University Avenue, Laramie, Wyoming 82071 (United States)

    2014-11-21

    The depletion of conventional hydrocarbon reservoirs has prompted the oil and gas industry to search for unconventional resources such as shale gas/oil reservoirs. In shale rocks, considerable amounts of hydrocarbon reside in nanoscale pore spaces. As a result, understanding the multiphase flow of wetting and non-wetting phases in nanopores is important to improve oil and gas recovery from these formations. This study was designed to investigate the threshold capillary pressure of oil and water displacements in a capillary dominated regime inside nanoscale pores using nonequilibrium molecular dynamics (NEMD) simulations. The pores have the same cross-sectional area and volume but different cross-sectional shapes. Oil and water particles were represented with a coarse grained model and the NEMD simulations were conducted by assigning external pressure on an impermeable piston. Threshold capillary pressures were determined for the drainage process (water replaced by oil) in different pores. The molecular dynamics results are in close agreements with calculations using the Mayer-Stowe-Princen (MS-P) method which has been developed on the premise of energy balance in thermodynamic equilibrium. After the drainage simulations, a change in wall particles’ wettability from water-wet to oil-wet was implemented based on the final configuration of oil and water inside the pore. Waterflooding simulations were then carried out at the threshold capillary pressure. The results show that the oil layer formed between water in the corner and in the center of the pore is not stable and collapses as the simulation continues. This is in line with the predictions from the MS-P method.

  9. THE LAST STAGES OF TERRESTRIAL PLANET FORMATION: DYNAMICAL FRICTION AND THE LATE VENEER

    International Nuclear Information System (INIS)

    The final stage of terrestrial planet formation consists of the clean-up of residual planetesimals after the giant impact phase. Dynamically, a residual planetesimal population is needed to damp the high eccentricities and inclinations of the terrestrial planets to circular and coplanar orbits after the giant impact stage. Geochemically, highly siderophile element (HSE) abundance patterns inferred for the terrestrial planets and the Moon suggest that a total of about 0.01 M⊕ of chondritic material was delivered as 'late veneer' by planetesimals to the terrestrial planets after the end of giant impacts. Here, we combine these two independent lines of evidence for a leftover population of planetesimals and show that: (1) a residual population of small planetesimals containing 0.01 M⊕ is able to damp the high eccentricities and inclinations of the terrestrial planets after giant impacts to their observed values. (2) At the same time, this planetesimal population can account for the observed relative amounts of late veneer added to the Earth, Moon, and Mars provided that the majority of the accreted late veneer was delivered by small planetesimals with radii ∼⊕/ρmars)(R⊕/Rmars)4 ∼ 17, which agrees well with the mass accretion ratio inferred from HSEs of 12-23. For the Earth-Moon system, we find a mass accretion ratio of ∼200, which, as we show, is consistent with estimates of 150-700 derived from HSE abundances that include the lunar crust as well as the mantle component. We conclude that small residual planetesimals containing about ∼1% of the mass of the Earth could provide the dynamical friction needed to relax the terrestrial planet's eccentricities and inclinations after giant impacts, and also may have been the dominant source for the late veneer added to Earth, Moon, and Mars.

  10. Decreased Pseudomonas aeruginosa biofilm formation on nanomodified endotracheal tubes: a dynamic lung model.

    Science.gov (United States)

    Machado, Mary C; Webster, Thomas J

    2016-01-01

    Ventilator-associated pneumonia (VAP) is a serious complication of mechanical ventilation that has been shown to be associated with increased mortality rates and medical costs in the pediatric intensive care unit. Currently, there is no cost-effective solution to the problems posed by VAP. Endotracheal tubes (ETTs) that are resistant to bacterial colonization and that inhibit biofilm formation could provide a novel solution to the problems posed by VAP. The objective of this in vitro study was to evaluate differences in the growth of Pseudomonas aeruginosa on unmodified polyvinyl chloride (PVC) ETTs and on ETTs etched with a fungal lipase, Rhizopus arrhizus, to create nanoscale surface features. These differences were evaluated using an in vitro model of the pediatric airway to simulate a ventilated patient in the pediatric intensive care unit. Each experiment was run for 24 hours and was supported by computational models of the ETT. Dynamic conditions within the ETT had an impact on the location of bacterial growth within the tube. These conditions also quantitatively affected bacterial growth especially within the areas of tube curvature. Most importantly, experiments in the in vitro model revealed a 2.7 log reduction in the number (colony forming units/mL) of P. aeruginosa on the nanoroughened ETTs compared to the untreated PVC ETTs after 24 hours. This reduction in total colony forming units/mL along the x-axis of the tube was similar to previous studies completed for Staphylococcus aureus. Thus, this dynamic study showed that lipase etching can create surface features of nanoscale roughness on PVC ETTs that decrease bacterial attachment of P. aeruginosa without the use of antibiotics and may provide clinicians with an effective and inexpensive tool to combat VAP. PMID:27563242

  11. Dynamics of protein aggregation and oligomer formation governed by secondary nucleation

    International Nuclear Information System (INIS)

    The formation of aggregates in many protein systems can be significantly accelerated by secondary nucleation, a process where existing assemblies catalyse the nucleation of new species. In particular, secondary nucleation has emerged as a central process controlling the proliferation of many filamentous protein structures, including molecular species related to diseases such as sickle cell anemia and a range of neurodegenerative conditions. Increasing evidence suggests that the physical size of protein filaments plays a key role in determining their potential for deleterious interactions with living cells, with smaller aggregates of misfolded proteins, oligomers, being particularly toxic. It is thus crucial to progress towards an understanding of the factors that control the sizes of protein aggregates. However, the influence of secondary nucleation on the time evolution of aggregate size distributions has been challenging to quantify. This difficulty originates in large part from the fact that secondary nucleation couples the dynamics of species distant in size space. Here, we approach this problem by presenting an analytical treatment of the master equation describing the growth kinetics of linear protein structures proliferating through secondary nucleation and provide closed-form expressions for the temporal evolution of the resulting aggregate size distribution. We show how the availability of analytical solutions for the full filament distribution allows us to identify the key physical parameters that control the sizes of growing protein filaments. Furthermore, we use these results to probe the dynamics of the populations of small oligomeric species as they are formed through secondary nucleation and discuss the implications of our work for understanding the factors that promote or curtail the production of these species with a potentially high deleterious biological activity

  12. Decreased Pseudomonas aeruginosa biofilm formation on nanomodified endotracheal tubes: a dynamic lung model

    Science.gov (United States)

    Machado, Mary C; Webster, Thomas J

    2016-01-01

    Ventilator-associated pneumonia (VAP) is a serious complication of mechanical ventilation that has been shown to be associated with increased mortality rates and medical costs in the pediatric intensive care unit. Currently, there is no cost-effective solution to the problems posed by VAP. Endotracheal tubes (ETTs) that are resistant to bacterial colonization and that inhibit biofilm formation could provide a novel solution to the problems posed by VAP. The objective of this in vitro study was to evaluate differences in the growth of Pseudomonas aeruginosa on unmodified polyvinyl chloride (PVC) ETTs and on ETTs etched with a fungal lipase, Rhizopus arrhizus, to create nanoscale surface features. These differences were evaluated using an in vitro model of the pediatric airway to simulate a ventilated patient in the pediatric intensive care unit. Each experiment was run for 24 hours and was supported by computational models of the ETT. Dynamic conditions within the ETT had an impact on the location of bacterial growth within the tube. These conditions also quantitatively affected bacterial growth especially within the areas of tube curvature. Most importantly, experiments in the in vitro model revealed a 2.7 log reduction in the number (colony forming units/mL) of P. aeruginosa on the nanoroughened ETTs compared to the untreated PVC ETTs after 24 hours. This reduction in total colony forming units/mL along the x-axis of the tube was similar to previous studies completed for Staphylococcus aureus. Thus, this dynamic study showed that lipase etching can create surface features of nanoscale roughness on PVC ETTs that decrease bacterial attachment of P. aeruginosa without the use of antibiotics and may provide clinicians with an effective and inexpensive tool to combat VAP. PMID:27563242

  13. Effects of Dynamic Changes in Ultrasound Attenuation and Blood Perfusion on Lesion Formation of Multiple focus Pattern during Ultrasound Surgery

    Institute of Scientific and Technical Information of China (English)

    ZHANG Chen-xi; BAI Jing-feng; CHEN Ya-zhu

    2007-01-01

    A nonlinear finite-element program was developed to simulate the dynamic evolution of coagulation in tissue considering temperature and thermal-dose dependence of the ultrasound attenuation and blood perfusion rate.The effects of these dynamic parameters on the lesion formation were investigated in the particular case of ultrasound hepatic ablation with bi-focus intensity pattern.The results of simulations were compared that incorporate dynamic changes of ultrasound attenuation and perfusion and results that neglect these effects.The result shows that thermal-dose-dependent ultrasound attenuation is the dominating factor in the full dynamic model.If the dynamic ultrasound attenuation is ignored, a relatively significant underestimation of the temperature rise appears in the focal plane and the region next to the focal plane, resulting in an underestimation in predicting diameter of coagulation.Higher heating intensity leads to greater underestimation.

  14. Large-Scale Gas Dynamics in the Adhesion Model: Implications for Massive Galaxy Formation

    CERN Document Server

    Domínguez-Tenreiro, R; Martínez-Serrano, F; Serna, A

    2010-01-01

    The mass assembly and star formation histories of massive galaxies identified at low redshift z in different cosmological hydrodynamical simulations, have been studied through a detailed follow-up backwards in time of their constituent mass elements (sampled by particles) of different types. Then, the configurations they depict at progressively higher zs have been analysed. The analyses show that these histories share common generic patterns, irrespective of particular circumstances. In any case, the results we have found are different depending on the particle type. The most outstanding differences follow. We have found that by z ~ 3.5 - 6, mass elements identified as stellar particles at z=0 exhibit a gaseous cosmic-web-like morphology with scales of ~ 1 physical Mpc, where the densest mass elements have already turned into stars by z ~ 6. These settings are in fact the densest pieces of the cosmic web, where no hot particles show up, and dynamically organized as a hierarchy of flow convergence regions, tha...

  15. The Last Stages of Terrestrial Planet Formation: Dynamical Friction and the Late Veneer

    CERN Document Server

    Schlichting, Hilke E; Yin, Qing-Zhu

    2012-01-01

    The final stage of terrestrial planet formation consists of the cleanup of residual planetesimals after the giant impact phase. Dynamically, a residual planetesimal population is needed to damp the high eccentricities of the terrestrial planets after the giant impact stage. Geochemically, highly siderophile element (HSE) abundance patterns inferred for the terrestrial planets and the Moon suggest that a total of about 0.01 M_Earth of chondritic material was delivered as `late veneer' by planetesimals to the terrestrial planets after the end of giant impacts. Here we combine these two independent lines of evidence for a leftover population of planetesimals and show that: 1) A residual planetesimal population containing 0.01 M_Earth is able to damp the eccentricities of the terrestrial planets after giant impacts to their observed values. 2) At the same time, this planetesimal population can account for the observed relative amounts of late veneer added to the Earth, Moon and Mars provided that the majority of ...

  16. A Dynamical Model for Gas Flows, Star Formation, and Nuclear Winds in Galactic Centres

    CERN Document Server

    Krumholz., Mark R; Crocker, Roland M

    2016-01-01

    We present a dynamical model for gas transport, star formation, and winds in the nuclear regions of galaxies, focusing on the Milky Way's Central Molecular Zone (CMZ). In our model angular momentum and mass are transported by a combination of gravitational and bar-driven acoustic instabilities. In gravitationally-unstable regions the gas can form stars, and the resulting feedback drives both turbulence and a wind that ejects mass from the CMZ. We show that the CMZ is in a quasi-steady state where mass deposited at large radii by the bar is transported inward to a star-forming, ring-shaped region at $\\sim 100$ pc from the Galactic Centre, where the shear reaches a minimum. This ring undergoes episodic starbursts, with bursts lasting $\\sim 5-10$ Myr occurring at $\\sim 20-40$ Myr intervals. During quiescence the gas in the ring is not fully cleared, but is driven out of a self-gravitating state by the momentum injected by expanding supernova remnants. Starbursts also drive a wind off the star-forming ring, with ...

  17. Computational issues in chemo-dynamical modelling of the formation and evolution of galaxies

    CERN Document Server

    Revaz, Yves; Nichols, Matthew; Bonvin, Vivien; Jablonka, Pascale

    2016-01-01

    Chemo-dynamical N-body simulations are an essential tool for understanding the formation and evolution of galaxies. As the number of observationally determined stellar abundances continues to climb, these simulations are able to provide new constraints on the early star formaton history and chemical evolution inside both the Milky Way and Local Group dwarf galaxies. Here, we aim to reproduce the low $\\alpha$-element scatter observed in metal-poor stars. We first demonstrate that as stellar particles inside simulations drop below a mass threshold, increases in the resolution produce an unacceptably large scatter as one particle is no longer a good approximation of an entire stellar population. This threshold occurs at around $10^3\\,\\rm{M_\\odot}$, a mass limit easily reached in current (and future) simulations. By simulating the Sextans and Fornax dwarf spheroidal galaxies we show that this increase in scatter at high resolutions arises from stochastic supernovae explosions. In order to reduce this scatter down...

  18. Dynamics of fast pattern formation in porous silicon by laser interference

    Energy Technology Data Exchange (ETDEWEB)

    Peláez, Ramón J.; Kuhn, Timo; Afonso, Carmen N. [Laser Processing Group, Instituto de Óptica, CSIC, Serrano 121, 28006 Madrid (Spain); Vega, Fidel [Departament d' Òptica i Optometria, UPC, Violinista Vellsolà 37, 08222 Terrasa (Spain)

    2014-10-20

    Patterns are fabricated on 290 nm thick nanostructured porous silicon layers by phase-mask laser interference using single pulses of an excimer laser (193 nm, 20 ns pulse duration). The dynamics of pattern formation is studied by measuring in real time the intensity of the diffraction orders 0 and 1 at 633 nm. The results show that a transient pattern is formed upon melting at intensity maxima sites within a time <30 ns leading to a permanent pattern in a time <100 ns upon solidification at these sites. This fast process is compared to the longer one (>1 μs) upon melting induced by homogeneous beam exposure and related to the different scenario for releasing the heat from hot regions. The diffraction efficiency of the pattern is finally controlled by a combination of laser fluence and initial thickness of the nanostructured porous silicon layer and the present results open perspectives on heat release management upon laser exposure as well as have potential for alternative routes for switching applications.

  19. Towards New Insights in the Sterol/Amphotericin Nanochannels Formation: A Molecular Dynamic Simulation Study.

    Science.gov (United States)

    Boukari, Khaoula; Balme, Sébastien; Janot, Jean-Marc; Picaud, Fabien

    2016-06-01

    Amphotericin B (AmB) is a well-known polyene which self-organizes into membrane cell in order to cause the cell death. Its specific action towards fungal cell is not fully understood but was proved to become from sterol composition. The mechanism was shown experimentally to require the formation of stable sterol/polyene couples which could then organize in a nanochannel. This would allow the leakage of ions responsible for the death of fungal cells, only. In this present study, we investigate the arrangement of AmB/sterols in biological membrane using molecular dynamic simulations in order to understand the role of the sterol structure on the antifungal action of the polyene. We show in particular that the nanochannels tend to close up when cell was composed with cholesterol (animal cell) due to strong interaction between amphotericin and sterol. On the other side, with ergosterol (fungal cell) the largest interactions between amphotericin and lipid membrane lead to the appearance of large hole that could favor the important leakage of ions and thus, the fungal cell death. This work appears as a good complement in the extensive studies linked to the understanding of the antifungal molecules in membrane cells.

  20. Dynamical thermalization and vortex formation in stirred two-dimensional Bose-Einstein condensates

    Science.gov (United States)

    Wright, T. M.; Ballagh, R. J.; Bradley, A. S.; Blakie, P. B.; Gardiner, C. W.

    2008-12-01

    We present a quantum-mechanical treatment of the mechanical stirring of Bose-Einstein condensates using classical field techniques. In our approach the condensate and excited modes are described using a Hamiltonian classical field method in which the atom number and (rotating frame) energy are strictly conserved. We simulate a T=0 quasi-two-dimensional condensate perturbed by a rotating anisotropic trapping potential. Vacuum fluctuations in the initial state provide an irreducible mechanism for breaking the initial symmetries of the condensate and seeding the subsequent dynamical instability. Highly turbulent motion develops and we quantify the emergence of a rotating thermal component that provides the dissipation necessary for the nucleation and motional damping of vortices in the condensate. Vortex lattice formation is not observed, rather the vortices assemble into a spatially disordered vortex liquid state. We discuss methods we have developed to identify the condensate in the presence of an irregular distribution of vortices, determine the thermodynamic parameters of the thermal component, and extract damping rates from the classical field trajectories.

  1. Dynamical pattern formation in a low-concentration magnetorheological fluid under two orthogonal sinusoidal fields

    Science.gov (United States)

    Yépez, L. D.; Carrillo, J. L.; Donado, F.; Sausedo-Solorio, J. M.; Miranda-Romagnoli, P.

    2016-06-01

    The dynamical pattern formation of clusters of magnetic particles in a low-concentration magnetorheological fluid, under the influence of a superposition of two perpendicular sinusoidal fields, is studied experimentally. By varying the frequency and phase shift of the perpendicular fields, this configuration enables us to experimentally analyze a wide range of field configurations, including the case of a pure rotating field and the case of an oscillating unidirectional field. The fields are applied parallel to the horizontal plane where the fluid lies or in the vertical plane. For fields applied in the horizontal plane, we observed that, when the ratio of the frequencies increases, the average cluster size exhibits a kind of periodic resonances. When the phase shift between the fields is varied, the average chain length reaches maximal values for the cases of the rotating field and the unidirectional case. We analyze and discuss these results in terms of a weighted average of the time-dependent Mason number. In the case of a rotating field on the vertical plane, we also observe that the competition between the magnetic and the viscous forces determines the average cluster size. We show that this configuration generates a series of physically meaningful self-organization of clusters and transport phenomena.

  2. Molecular dynamics study of crater formation by core-shell structured cluster impact

    Science.gov (United States)

    Aoki, Takaaki; Seki, Toshio; Matsuo, Jiro

    2012-07-01

    Crater formation processes by the impacts of large clusters with binary atomic species were studied using molecular dynamics (MD) simulations. Argon and xenon atoms are artificially organized in core-shell cluster structures with various component ratios and irradiated on a Si(1 0 0) target surface. When the cluster has Xe1000 core covered with 1000 Ar atoms, and impacts at a total of 20 keV, the core Xe cluster penetrates into the deep area, and a crater with a conical shape is left on the target. On the other hand, in the case of a cluster with the opposite structure, Ar1000 core covered with 1000 Xe atoms, the cluster stops at a shallow area of the target. The incident cluster atoms are mixed and tend to spread in a lateral direction, which results in a square shaped crater with a shallower hole and wider opening. The MD simulations suggest that large cluster impacts cause different irradiation effects by changing the structure, even if the component ratio is the same.

  3. Aerosol dynamics simulations on the connection of sulphuric acid and new particle formation

    Directory of Open Access Journals (Sweden)

    S.-L. Sihto

    2008-06-01

    Full Text Available We have performed a series of simulations with an aerosol dynamics box model to study the connection between new particle formation and sulphuric acid concentration. For nucleation either activation mechanism with a linear dependence on the sulphuric acid concentration or ternary H2O-H2SO4-NH3 nucleation was assumed. We investigated the factors that affect the sulphuric acid dependence during the early stages of particle growth, and tried to find conditions which would yield the linear dependence between the particle number concentration at 3–6 nm and sulphuric acid, as observed in field experiments. The simulations showed that the correlation with sulphuric acid may change during the growth from nucleation size to 3–6 nm size range, the main reason being the size dependent growth rate between 1 and 3 nm. In addition, the assumed size for the nucleated clusters had a crucial impact on the sulphuric acid dependence at 3 nm. The simulations yielded a linear dependence between the particle number concentration at 3 nm and sulphuric acid, when a low saturation vapour pressure for the condensable organic vapour was assumed, or when nucleation took place at ~2 nm instead of ~1 nm. Comparison of results with activation and ternary nucleation showed that ternary nucleation cannot explain the experimentally observed linear or square dependence on sulphuric acid.

  4. Molecular dynamics study of crater formation by core-shell structured cluster impact

    International Nuclear Information System (INIS)

    Crater formation processes by the impacts of large clusters with binary atomic species were studied using molecular dynamics (MD) simulations. Argon and xenon atoms are artificially organized in core-shell cluster structures with various component ratios and irradiated on a Si(1 0 0) target surface. When the cluster has Xe1000 core covered with 1000 Ar atoms, and impacts at a total of 20 keV, the core Xe cluster penetrates into the deep area, and a crater with a conical shape is left on the target. On the other hand, in the case of a cluster with the opposite structure, Ar1000 core covered with 1000 Xe atoms, the cluster stops at a shallow area of the target. The incident cluster atoms are mixed and tend to spread in a lateral direction, which results in a square shaped crater with a shallower hole and wider opening. The MD simulations suggest that large cluster impacts cause different irradiation effects by changing the structure, even if the component ratio is the same.

  5. Modelling plastic deformation in BCC metals: Dynamic recovery and cell formation effects

    Energy Technology Data Exchange (ETDEWEB)

    Galindo-Nava, E.I. [Department of Materials Science and Metallurgy, Pembroke Street, CB2 3QZ, University of Cambridge, Cambridge (United Kingdom); Department of Materials Science and Engineering, Mekelweg 2 2628 CD, Delft University of Technology, Delft (Netherlands); Rivera-Diaz-del-Castillo, P.E.J., E-mail: pejr2@cam.ac.uk [Department of Materials Science and Metallurgy, Pembroke Street, CB2 3QZ, University of Cambridge, Cambridge (United Kingdom)

    2012-12-15

    A recently developed model for describing plasticity in FCC metals (E.I., Galindo-Nava, P.E.J., Rivera-Diaz-del-Castillo, Mater. Sci. Eng. A 543 (2012) 110-116; E.I. Galindo-Nava, P.E.J. Rivera-Diaz-del-Castillo, Acta Mater. 60 (2012) 4370-4378) has now been applied to BCC. The core of the theory is the thermostatistical description of dislocation annihilation paths, which determines the dynamic recovery rate of the material. Input to this is the energy for the formation, migration and ordering of dislocation paths; the latter term corresponds to the statistical entropy which features strongly on the solution. The distinctions between FCC and BCC stem primarily from the possible directions and planes for dislocation slip and cross-slip, as well as from the presence of the kink-pair mechanism for dislocation migration in BCC, which are incorporated to the mathematical formulation of the model. The theory is unique in describing the stress-strain response for pure iron, molybdenum, tantalum, vanadium and tungsten employing physical parameters as input; the description is made for wide ranges of temperature and strain rate. Additionally, succinct equations to predict dislocation cell size variation with strain, strain rate and temperature are provided and validated for pure iron.

  6. Dynamic O-GlcNAc modification regulates CREB-mediated gene expression and memory formation.

    Science.gov (United States)

    Rexach, Jessica E; Clark, Peter M; Mason, Daniel E; Neve, Rachael L; Peters, Eric C; Hsieh-Wilson, Linda C

    2012-01-22

    The transcription factor cyclic AMP-response element binding protein (CREB) is a key regulator of many neuronal processes, including brain development, circadian rhythm and long-term memory. Studies of CREB have focused on its phosphorylation, although the diversity of CREB functions in the brain suggests additional forms of regulation. Here we expand on a chemoenzymatic strategy for quantifying glycosylation stoichiometries to characterize the functional roles of CREB glycosylation in neurons. We show that CREB is dynamically modified with an O-linked β-N-acetyl-D-glucosamine sugar in response to neuronal activity and that glycosylation represses CREB-dependent transcription by impairing its association with CREB-regulated transcription coactivator (CRTC; also known as transducer of regulated CREB activity). Blocking glycosylation of CREB alters cellular function and behavioral plasticity, enhancing both axonal and dendritic growth and long-term memory consolidation. Our findings demonstrate a new role for O-glycosylation in memory formation and provide a mechanistic understanding of how glycosylation contributes to critical neuronal functions. Moreover, we identify a previously unknown mechanism for the regulation of activity-dependent gene expression, neural development and memory.

  7. The effect of dynamic recrystallization and LPO formation on deformation mechanisms in experimentally deformed plagioclase aggregates

    Science.gov (United States)

    Meyers, C. D.; Hirth, G.; Cross, A. J.; Prior, D. J.

    2013-12-01

    We performed a series of deformation experiments on intermediate plagioclase aggregates (An60) that explored the role of dynamic recrystallization and LPO formation on the deformation mechanisms active and their effect on the mechanical strength of the aggregates. Our experiments were executed using a molten salt cell in a Tullis-modified Griggs Rig at 1 GPa, temperatures between 950-1100 C. These experiments were run in both axial compression and general shear geometries at both constant strain rates and with strain rate steps. The imposed strain rates ranged from 10^-4 to 5*10^-7 s^-1. The sample aggregates were prepared by sintering powders ranging from 20-45 micron at experimental P-T conditions prepared from pulverized single crystals of labradorite. We observed a strong dependence of strength on the strain-rate history of the experiment. Initially the samples weaken dramatically as the grain-size is reduced in the sample aggregate. During strain-rate stepping experiments, used to calculate the stress exponent, we observe variation in the strain-rate dependence of the strength related to whether there is an increasing or decreasing strain rate. Increasing the strain-rate tends to show stress exponent close to n=3, consistent with deformation by dislocation creep. Decreasing the strain-rate tends to decrease the stress exponent towards n=1, consistent with deformation by diffusion creep. Further, analysis using electron backscatter diffraction (EBSD) revealed distinctive LPOs that were different between larger relict porphryclast grains (>20 micron) and smaller recrystallized grains (1-4 micron). Larger relict grains have an LPO with {001} poles perpendicular to the shear plane, while smaller recrystallized grains have an LPO with {010} poles perpendicular to the shear plane. This is evidence that the processes that facilitate deformation are different between the relict and recrystallized grains. We also observe grain scale shear bands oriented roughly 30

  8. Laser-induced UV photodissociation of 2-bromo-2-nitropropane: dynamics of OH and Br formation.

    Science.gov (United States)

    Saha, Ankur; Kawade, Monali; Upadhyaya, Hari P; Kumar, Awadhesh; Naik, Prakash D

    2011-01-28

    Photoexcitation of 2-bromo-2-nitropropane (BNP) at 248 and 193 nm generates OH, Br, and NO(2) among other products. The OH fragment is detected by laser-induced fluorescence spectroscopy, and its translational and internal state distributions (vibration, rotation, spin-orbit, and Λ-doubling components) are probed. At both 248 and 193 nm, the OH fragment is produced translationally hot with the energy of 10.8 and 17.2 kcal∕mol, respectively. It is produced vibrationally cold (v" = 0) at 248 nm, and excited (v" = 1) at 193 nm with a vibrational temperature of 1870 ± 150 K. It is also generated with rotational excitation, rotational populations of OH(v" = 0) being characterized by a temperature of 550 ± 50 and 925 ± 100 K at 248 and 193 nm excitation of BNP, respectively. The spin-orbit components of OH(X(2)Π) are not in equilibrium on excitation at 193 nm, but the Λ-doublets are almost in equilibrium, implying no preference for its π lobe with respect to the plane of rotation. The NO(2) product is produced electronically excited, as detected by measuring UV-visible fluorescence, at 193 nm and mostly in the ground electronic state at 248 nm. The Br product is detected employing resonance-enhanced multiphoton ionization with time-of-flight mass spectrometer for better understanding of the dynamics of dissociation. The forward convolution analysis of the experimental data has provided translational energy distributions and anisotropy parameters for both Br((2)P(3∕2)) and Br∗((2)P(1∕2)). The average translational energies for the Br and Br∗ channels are 5.0 ± 1.0 and 6.0 ± 1.5 kcal∕mol. No recoil anisotropies were observed for these products. Most plausible mechanisms of OH and Br formation are discussed based on both the experimental and the theoretical results. Results suggest that the electronically excited BNP molecules at 248 and 234 nm relax to the ground state, and subsequently dissociate to produce OH and Br through different channels. The

  9. Role of ionospheric effects and plasma sheet dynamics in the formation of auroral arcs

    Science.gov (United States)

    Prakash, Manju; Rankin, R.

    2001-01-01

    At the ionospheric level, the substorm onset (expansion phase) is marked by the initial brightening and subsequent breakup of a pre-existing auroral arc. According to the field line resonance (FLR) wave model, the substorm-related auroral arc is caused by the field-aligned current carried by FLRs. The FLRs are standing shear Alfvén wave structures that are excited along the dipole/quasi-dipole lines of the geomagnetic field. The FLRs (that can cause auroral arc) thread from the Earthward edge of the plasma sheet and link the auroral arc to the plasma sheet region of 6-15 R_E. The region is associated with magnetic fluctuations that result from the nonlinear wave-wave interactions of the cross-field current-instability. The instability (excited at the substorm onset) disrupts the cross-tail current which is built up during the growth phase of the substorms and results in magnetic fluctuations. The diversion of the current to polar regions can lead to auroral arc intensification. The current FLR model is based on the amplitude equations that describe the nonlinear space-time evolution of FLRs in the presence of ponderomotive forces exerted by large amplitude FLRs (excited during substorms). The present work will modify the FLR wave model to include the effects arising from magnetic fluctuations that result from current disruption near the plasma sheet (6-15 R_E). The nonlinear evolution of FLRs is coupled with the dynamics of plasma sheet through a momentum exchange term (resulting from magnetic fluctuations due to current disruption) in the generalized Ohm's law. The resulting amplitude equations including the effects arising from magnetic fluctuations can be used to study the structure of the auroral arcs formed during substorms. We have also studied the role of feedback mechanism (in a dipole geometry of the geomagnetic field) in the formation of the discrete auroral arc observed on the nightside magnetosphere. The present nonlinear dispersive model (NDM) is

  10. The roles of dynamical variability and aerosols in cirrus cloud formation

    Directory of Open Access Journals (Sweden)

    B. Kärcher

    2003-01-01

    significantly modify the probability distribution of cirrus ice crystal concentrations. This study emphasizes the key role of vertical velocities and mesoscale variability in vertical velocities in controlling cirrus properties. The results suggest that, in any effort to ascribe cause to trends of cirrus cloud properties, a careful evaluation of dynamical changes in cloud formation should be done before conclusions regarding the role of other anthropogenic factors, such as changes in aerosol composition, are made.

  11. Dynamic interaction of an eccentric multipole cylindrical radiator suspended in a fluid-filled borehole within a poroelastic formation

    Institute of Scientific and Technical Information of China (English)

    Seyyed M.Hasheminejad; Amir K.Miri

    2007-01-01

    Acoustic radiation and the dynamic field induced by a cylindrical source of infinite extent, undergoing angularly periodic and axially-dependent harmonic surface vibrations, while eccentrically suspended in a fluid-filled cylindrical cavity embedded within a fluid-saturated porous elastic formation, are analyzed in an exact manner. This con-figuration, which is a realistic idealization of an acoustic logging tool suspended in a fluid-filled borehole within a permeable surrounding formation, is of practical importance with a multitude of possible applications in seismo-acoustics.The formulation utilizes the novel features of Biot dynamic theory of poroelasticity along with the translational addition theorem for cylindrical wave functions to obtain a closed-form series solution. The basic dynamic field quantities such as the resistive and the reactive components of the modal acoustic radiation impedance load on the source in addition to the radial and transverse stresses induced in the surround-ing formation by an eccentric pulsating/oscillating cylinder in a water-filled borehole within a water-saturated Ridge-field sandstone medium are evaluated and discussed. Special attention is paid to the effects of source eccentricity,excitation frequency, and mode of surface oscillations on the modal impedance values and the dynamic stresses. Limiting cases are considered and good agreements with available solutions are obtained.

  12. Dark-ages Reionization and Galaxy formation simulation - I. The dynamical lives of high-redshift galaxies

    Science.gov (United States)

    Poole, Gregory B.; Angel, Paul W.; Mutch, Simon J.; Power, Chris; Duffy, Alan R.; Geil, Paul M.; Mesinger, Andrei; Wyithe, Stuart B.

    2016-07-01

    We present the Dark-ages Reionization and Galaxy formation Observables from Numerical Simulations (DRAGONS) programme and Tiamat, the collisionless N-body simulation programme upon which DRAGONS is built. The primary trait distinguishing Tiamat from other large simulation programme is its density of outputs at high redshift (100 from z = 35 to z = 5; roughly one every 10 Myr) enabling the construction of very accurate merger trees at an epoch when galaxy formation is rapid and mergers extremely frequent. We find that the friends-of-friends halo mass function agrees well with the prediction of Watson et al. at high masses, but deviates at low masses, perhaps due to our use of a different halo finder or perhaps indicating a break from `universal' behaviour. We then analyse the dynamical evolution of galaxies during the Epoch of Reionization finding that only a small fraction (˜20 per cent) of galactic haloes are relaxed. We illustrate this using standard relaxation metrics to establish two dynamical recovery time-scales: (i) haloes need ˜1.5 dynamical times following formation, and (ii) ˜2 dynamical times following a major (3:1) or minor (10:1) merger to be relaxed. This is remarkably consistent across a wide mass range. Lastly, we use a phase-space halo finder to illustrate that major mergers drive long-lived massive phase-space structures which take many dynamical times to dissipate. This can yield significant differences in the inferred mass build-up of galactic haloes and we suggest that care must be taken to ensure a physically meaningful match between the galaxy formation physics of semi-analytic models and the halo finders supplying their input.

  13. Influence of nitric laser (ultraviolet) on dynamics of adhesion formation in peritoneum

    International Nuclear Information System (INIS)

    The investigation of adhesion formation in peritoneums after ultraviolet laser irradiation was carried out by morphological methods. It was revealed that ultraviolet laser irradiation prevents the adhesion formation, because this laser decreases the rate of the proliferation of mesotheliomas. This phenomenon may be used for the prophylaxis of adhesions formation. (author)

  14. Aerosol dynamics simulations on the connection of sulphuric acid and new particle formation

    Directory of Open Access Journals (Sweden)

    S.-L. Sihto

    2009-05-01

    Full Text Available We have performed a series of simulations with an aerosol dynamics box model to study the connection between new particle formation and sulphuric acid concentration. For nucleation either activation mechanism with a linear dependence on the sulphuric acid concentration, kinetic mechanism with a squared dependence on the sulphuric acid concentration or ternary H2O-H2SO4-NH3 nucleation was assumed. The aim was to study the factors that affect the sulphuric acid dependence during the early stages of particle growth, and specifically to find conditions which would yield the linear dependence between the particle number concentration at 3–6 nm and sulphuric acid, as observed in field experiments. The simulations showed that the correlation with sulphuric acid may change during the growth from nucleation size to 3–6 nm size range, the main reason being the size dependent growth rate between 1 and 3 nm. In addition, the assumed size for the nucleated clusters had a crucial impact on the sulphuric acid dependence at 3 nm. A linear dependence between the particle number concentration at 3 nm and sulphuric acid was achieved, when activation nucleation mechanism was used with a low saturation vapour pressure for the condensable organic vapour, or with nucleation taking place at ~2 nm instead of ~1 nm. Simulations with activation, kinetic and ternary nucleation showed that ternary nucleation reproduces too steep dependence on sulphuric acid as compared to the linear or square dependence observed in field measurements.

  15. Formation and near-field dynamics of a wing tip vortex

    Science.gov (United States)

    Zuhal, Lavi Rizki

    2001-12-01

    The search for a more efficient method to destroy aircraft trailing vortices requires a good understanding of the early development of the vortices. For that purpose, an experimental investigation has been conducted to study the formation and near-field dynamics of a wing tip vortex. Two versions of the Digital Particle Image Velocimetry (DPIV) technique were used in the studies. Planar DPIV was used to obtain velocity fields adjacent to the wing surface. Stereoscopic DPIV, which allows instantaneous measurements of all three components of velocity within a planar slice, was used to measure velocity fields behind the wing. The trailing vortex was produced by a rectangular half-wing model with an NACA 0012 profile. All measurements were made at Reynolds number, based on chord length, of 9040. The present study has found that the wing sheds multiple vortices. A structure that closely resembles a wing tip vortex is first observed on the suction side of the wing near the tip at the mid-chord section of the wing. At the trailing edge of the wing, a smaller vortex with an opposite sense of rotation is observed next to the tip vortex. In addition to the two vortices, two vortex layers with opposite sense of rotation, one on the pressure side and one on the suction side, are apparent at the trailing edge. Farther downstream, most of the vorticity in the vortex layer, with the same sense of rotation as the tip vortex, rolls up into the wing tip vortex. The vortices, with opposite sense of rotation, break up into smaller vortices which orbit around the tip vortex. At least one relatively strong satellite vortex appears in some of the instantaneous fields. The studies found that the interaction of the tip vortex and satellite vortices give rise to the unsteady motion of the wing tip vortex. In addition, the studies also examined the effects of the boundary layer and the tip geometry to the strength and motion of the trailing vortex.

  16. Dynamic-stochastic modeling of snow cover formation on the European territory of Russia

    Directory of Open Access Journals (Sweden)

    A. N. Gelfan

    2014-01-01

    Full Text Available A dynamic-stochastic model, which combines a deterministic model of snow cover formation with a stochastic weather generator, has been developed. The deterministic snow model describes temporal change of the snow depth, content of ice and liquid water, snow density, snowmelt, sublimation, re-freezing of melt water, and snow metamorphism. The model has been calibrated and validated against the long-term data of snow measurements over the territory of the European Russia. The model showed good performance in simulating time series of the snow water equivalent and snow depth. The developed weather generator (NEsted Weather Generator, NewGen includes nested generators of annual, monthly and daily time series of weather variables (namely, precipitation, air temperature, and air humidity. The parameters of the NewGen have been adjusted through calibration against the long-term meteorological data in the European Russia. A disaggregation procedure has been proposed for transforming parameters of the annual weather generator into the parameters of the monthly one and, subsequently, into the parameters of the daily generator. Multi-year time series of the simulated daily weather variables have been used as an input to the snow model. Probability properties of the snow cover, such as snow water equivalent and snow depth for return periods of 25 and 100 years, have been estimated against the observed data, showing good correlation coefficients. The described model has been applied to different landscapes of European Russia, from steppe to taiga regions, to show the robustness of the proposed technique.

  17. Efficient transfer of positrons from a buffer-gas-cooled accumulator into an orthogonally oriented superconducting solenoid for antihydrogen studies

    CERN Document Server

    Comeau, D; Fitzakerley, D; George, M C; Hessels, E A; Storry, C H; Weel, M; Grzonka, D; Oelert, W; Gabrielse, G; Kalra, R; Kolthammer, W S; McConnell, R; Richerme, P; Mullers, A; Walz, J

    2012-01-01

    Positrons accumulated in a room-temperature buffer-gas-cooled positron accumulator are efficiently transferred into a superconducting solenoid which houses the ATRAP cryogenic Penning trap used in antihydrogen research. The positrons are guided along a 9 m long magnetic guide that connects the central field lines of the 0.15 T field in the positron accumulator to the central magnetic field lines of the superconducting solenoid. Seventy independently controllable electromagnets are required to overcome the fringing field of the large-bore superconducting solenoid. The guide includes both a 15 degrees upward bend and a 105 degrees downward bend to account for the orthogonal orientation of the positron accumulator with respect to the cryogenic Penning trap. Low-energy positrons ejected from the accumulator follow the magnetic field lines within the guide and are transferred into the superconducting solenoid with nearly 100% efficiency. A 7 m long 5 cm diameter stainless-steel tube and a 20 mm long, 1.5 mm diamet...

  18. Quantum statistics in the spin-lattice dynamics simulation of formation and migration of mono-vacancy in BCC iron

    Science.gov (United States)

    Wen, Haohua; Woo, C. H.

    2016-03-01

    Contributions from the vibrational thermodynamics of phonons and magnons in the dynamic simulations of thermally activated atomic processes in crystalline materials were considered within the framework of classical statistics in conventional studies. The neglect of quantum effects produces the wrong lattice and spin dynamics and erroneous activation characteristics, sometimes leading to the incorrect results. In this paper, we consider the formation and migration of mono-vacancy in BCC iron over a large temperature range from 10 K to 1400 K, across the ferro/paramagnetic phase boundary. Entropies and enthalpies of migration and formation are calculated using quantum heat baths based on a Bose-Einstein statistical description of thermal excitations in terms of phonons and magnons. Corrections due to the use of classical heat baths are evaluated and discussed.

  19. Dynamical Analysis of a Continuous Stirred-Tank Reactor with the Formation of Biofilms for Wastewater Treatment

    Directory of Open Access Journals (Sweden)

    Karen López Buriticá

    2015-01-01

    Full Text Available This paper analyzes the dynamics of a system that models the formation of biofilms in a continuous stirred-tank reactor (CSTR when it is utilized for wastewater treatment. The growth rate of the microorganisms is modeled using two different kinetics, Monod and Haldane kinetics, with the goal of studying the influence of each in the system. The equilibrium points are identified through a stability analysis, and the bifurcations found are characterized.

  20. Formation and dynamics of vortices in a Bose-Einstein condensate with a moving impenetrable disk-shaped potential

    Science.gov (United States)

    Chen, Guang-Ping; Dong, Biao; Wang, Lin-Xue; Xie, Zheng-Wei; Zhang, Shou-Gang

    2016-10-01

    We consider a quasi-two-dimensional Bose-Einstein condensate with a moving impenetrable disk-shaped potential. By performing direct numerical simulations, we investigate the formation and dynamics of the vortices in the wake as a function of the moving velocity and the radius of the potential. For moderate moving velocity, we observe the formation of a bound vortex pair in the wake of the potential. Its shedding period and associated patterns depend on the radius of the potential, showing V-shaped, periodic, or complex wakes. More interestingly, at high velocity both the vortex pair and vortex dipole can be formed simultaneously. Furthermore, the activation time for vortex formation is investigated for different velocities. We also give an experimental protocol to observe these phenomena in future experiments.

  1. Molecular dynamics simulation of the formation of sp3 hybridized bonds in hydrogenated diamondlike carbon deposition processes.

    Science.gov (United States)

    Murakami, Yasuo; Horiguchi, Seishi; Hamaguchi, Satoshi

    2010-04-01

    The formation process of sp3 hybridized carbon networks (i.e., diamondlike structures) in hydrogenated diamondlike carbon (DLC) films has been studied with the use of molecular-dynamics simulations. The processes simulated in this study are injections of hydrocarbon (CH3 and CH) beams into amorphous carbon (a-C) substrates. It has been shown that diamondlike sp3 structures are formed predominantly at a subsurface level when the beam energy is relatively high, as in the "subplantation" process for hydrogen-free DLC deposition. However, for hydrogenated DLC deposition, the presence of abundant hydrogen at subsurface levels, together with thermal spikes caused by energetic ion injections, substantially enhances the formation of carbon-to-carbon sp3 bonds. Therefore, the sp3 bond formation process for hydrogenated DLC films essentially differs from that for hydrogen-free DLC films.

  2. Dynamics and neutrino signal of black hole formation in non-rotating failed supernovae. II. progenitor dependence

    CERN Document Server

    Sumiyoshi, K; Suzuki, H

    2008-01-01

    We study the progenitor dependence of the black hole formation and its associated neutrino signals from the gravitational collapse of non-rotating massive stars, following the preceding study on the single progenitor model in Sumiyoshi et al. (2007). We aim to clarify whether the dynamical evolution toward the black hole formation occurs in the same manner for different progenitors and to examine whether the characteristic of neutrino bursts is general having the short duration and the rapidly increasing average energies. We perform the numerical simulations by general relativistic neutrino-radiation hydrodynamics to follow the dynamical evolution from the collapse of pre-supernova models of 40Msun and 50Msun toward the black hole formation via contracting proto-neutron stars. For the three progenitor models studied in this paper, we found that the black hole formation occurs in ~0.4-1.5 s after core bounce through the increase of proto-neutron star mass together with the short and energetic neutrino burst. W...

  3. Characterization of the Electric Double Layer Formation Dynamics of a Metal/Ionic Liquid/Metal Structure.

    Science.gov (United States)

    Schmidt, Elliot; Shi, Sha; Ruden, P Paul; Frisbie, C Daniel

    2016-06-15

    Although ionic liquids (ILs) have been used extensively in recent years as a high-capacitance "dielectric" in electric double layer transistors, the dynamics of the double layer formation have remained relatively unexplored. Better understanding of the dynamics and relaxation processes involved in electric double layer formation will guide device optimization, particularly with regard to switching speed. In this paper, we explore the dynamical characteristics of an IL in a metal/ionic liquid/metal (M/IL/M) capacitor. In particular, we examine a Au/IL/Au structure where the IL is 1-butyl-1-methylpyrrolidinium tris(pentafluoroethyl)trifluorophosphate. The experiments consist of frequency-dependent impedance measurements and time-dependent current vs voltage measurements for applied linear voltage ramps and abrupt voltage steps. The parameters of an equivalent circuit model are determined by fits to the impedance vs frequency data and subsequently verified by calculating the current vs voltage characteristics for the applied potential profiles. The data analysis indicates that the dynamics of the structure are characterized by a wide distribution of relaxation times spanning the range of less than microseconds to longer than seconds. Possible causes for these time scales are discussed. PMID:27213215

  4. Dynamics of Green AuNP Formation and Their Application in Core-Shell Nanostructures

    DEFF Research Database (Denmark)

    Engelbrekt, Christian; Zhang, Jingdong; Jensen, Palle Skovhus;

    The formation of gold nanoparticles in our optimized synthesis is achieved through reduction of tetrachloroauric acid in 2 - (N - morpholino)ethanesulphonic acid (MES) buffered glucose and stabilization by starch at room temperature. The formation has been followed by measuring the electrochemica...

  5. Late-Stage Reservoir Formation Effect and Its Dynamic Mechanisms in Complex Superimposed Basins

    Institute of Scientific and Technical Information of China (English)

    KANG Dejiang; PANG Xiongqi; KUANG Jun; LUO Xiaorong; PANG Hong; LEI Lei

    2010-01-01

    Complex superimposed basins exhibit multi-stage tectonic events and multi-stage reservoir formation; hydrocarbon reservoirs formed in the early stage have generally late-stage genesis characteristics after undergoing adjustment,reconstruction and destruction of later-stage multiple tectonic events.In this paper,this phenomenon is called the late-stage reservoir formation effect.The late-stage reservoir formation effect is a basic feature of oil and gas-forming reservoirs in complex superimposed basins,revealing not only multi-stage character,relevance and complexity of oil and gas-forming reservoirs in superimposed basins but also the importance of late-stage reservoir formation.Late-stage reservoir formation is not a basic feature of off and gas forming reservoir in superimposed basins.Multi-stage reservoir formation only characterizes one aspect of oil and gas-forming reservoir in superimposed basins and does not represent fully the complexity of oil and gas-forming reservoir in superimposed basins.We suggest using"late-stage reservoir formation effect"to replace the"late-stage reservoir formation"concept to guide the exploration of complex reservoirs in superimposed basins.Under current geologic conditions,the late-stage reservoir formation effect is represented mainly by four basic forms:phase transformation,scale reconstruction,component variation and trap adjustment.The late-stage reservoir formation effect is produced by two kinds of geologic processes:first,the off and gas retention function of various geologic thresholds(hydrocarbon expulsion threshold,hydrocarbon migration threshold,and hydrocarbon accumulating threshold)causes the actual time of oil and gas reservoir formation to be later than the time of generation of large amounts of hydrocarbon in a conventional sense,producing the late-stage reservoir formation effect; second,multiple types of tectonic events(continuously strong reconstruction,early-stage strong reconstruction,middle-stage strong

  6. 一种编队控制的动态调整与规划方法%A Dynamic Regulation and Scheduling Scheme for Formation Control

    Institute of Scientific and Technical Information of China (English)

    陈余庆; 庄严; 王伟

    2007-01-01

    This article is concerned with cooperative control problems in formation of mobile robots under the nonholonomic constraints that certain geometrical constraints are imposed on multiple mobile robots throughout their travel. For this purpose, a new method of motion control for formation is presented, which is based on the dynamic regulation and scheduling scheme. It is attractive for its adaptability to the formation structure and desired trajectory. The quality of formation keeping can be evaluated by the instantaneous errors of formation offset and spacing distance. Some kinematics laws are developed to regulate and maintain the formation shape. Simulation results and data analysis show the validity of the proposed approach for a group of robots.

  7. Dynamics of iron-acceptor-pair formation in co-doped silicon

    Energy Technology Data Exchange (ETDEWEB)

    Bartel, T.; Gibaja, F.; Graf, O.; Gross, D.; Kaes, M.; Heuer, M.; Kirscht, F. [Calisolar GmbH, Magnusstrasse 11, 12489 Berlin (Germany); Möller, C. [CiS Forschungsinstitut für Mikrosensorik und Photovoltaik GmbH, Konrad-Zuse-Str. 14, 99099 Erfurt (Germany); TU Ilmenau, Institut für Physik, Weimarer Str. 32, 98693 Ilmenau (Germany); Lauer, K. [CiS Forschungsinstitut für Mikrosensorik und Photovoltaik GmbH, Konrad-Zuse-Str. 14, 99099 Erfurt (Germany)

    2013-11-11

    The pairing dynamics of interstitial iron and dopants in silicon co-doped with phosphorous and several acceptor types are presented. The classical picture of iron-acceptor pairing dynamics is expanded to include the thermalization of iron between different dopants. The thermalization is quantitatively described using Boltzmann statistics and different iron-acceptor binding energies. The proper understanding of the pairing dynamics of iron in co-doped silicon will provide additional information on the electronic properties of iron-acceptor pairs and may become an analytical method to quantify and differentiate acceptors in co-doped silicon.

  8. Localization and dynamics of amylose-lipophilic molecules inclusion complex formation in starch granules

    NARCIS (Netherlands)

    Manca, Marianna; Woortman, Albert J. J.; Mura, Andrea; Loos, Katja; Loi, Maria Antonietta

    2015-01-01

    Inclusion complex formation between lipophilic dye molecules and amylose polymers in starch granules is investigated using laser spectroscopy and microscopy. By combining confocal laser scanning microscopy (CLSM) with spatial resolved photoluminescence (PL) spectroscopy, we are able to discriminate

  9. Vague-to-crisp dynamics of percept formation modeled as operant (selectionist) process

    OpenAIRE

    Ilin, Roman; Jun ZHANG; Perlovsky, Leonid; Kozma, Robert

    2013-01-01

    We model the vague-to-crisp dynamics of forming percepts in the brain by combining two methodologies: dynamic logic (DL) and operant learning process. Forming percepts upon the presentation of visual inputs is likened to model selection based on sampled evidence. Our framework utilizes the DL in selecting the correct “percept” among competing ones, but uses an intrinsic reward mechanism to allow stochastic online update in lieu of performing the optimization step of the DL framework. We discu...

  10. An aerosol dynamics model for simulating particle formation and growth in a mixed flow chamber

    OpenAIRE

    Vesterinen, M.; Korhonen, H.; Joutsensaari, J.; P. Yli-Pirilä; Laaksonen, A.; Lehtinen, K. E. J.

    2011-01-01

    In this work we model the aerosol size distribution dynamics in a mixed flow chamber in which new particles are formed via nucleation and subsequent condensation of oxidation products of VOCs emitted from Norway spruce seedlings. The microphysical processes included in the model are nucleation, condensation, deposition and coagulation. The aerosol dynamics in the chamber is a competition between aerosol growth and scavenging/deposition whi...

  11. AEg¯$\\overline {\\rm{g}}$IS Experiment: Measuring the acceleration g of the earth’s gravitational field on antihydrogen beam

    Directory of Open Access Journals (Sweden)

    Subieta Vasquez M. A.

    2014-04-01

    Full Text Available The AEg¯ $\\overline {\\rm{g}}$IS experiment [1] aims at directly measuring the gravitational acceleration g on a beam of cold antihydrogen (H¯$\\overline {\\rm{H}}$ to a precision of 1%, performing the first test with antimatter of the (WEP Weak Equivalence Principle. The experimental apparatus is sited at the Antiproton Decelerator (AD at CERN, Geneva, Switzerland. After production by mixing of antiprotons with Rydberg state positronium atoms (Ps, the H¯$\\overline {\\rm{H}}$ atoms will be driven to fly horizontally with a velocity of a few 100 ms−1 for a path length of about 1 meter. The small deflection, few tens of μm, will be measured using two material gratings (of period ∼ 80 μm coupled to a position-sensitive detector working as a moiré deflectometer similarly to what has been done with matter atoms [2]. The shadow pattern produced by the H¯$\\overline {\\rm{H}}$ beam will then be detected by reconstructing the annihilation points with a spatial resolution (∼ 2 μm of each antiatom at the end of the flight path by the sensitive-position detector. During 2012 the experimental apparatus has been commissioned with antiprotons and positrons. Since the AD will not be running during 2013,during the refurbishment of the CERN accelerators, the experiment is currently working with positrons, electrons and protons, in order to prepare the way for the antihydrogen production in late 2014.

  12. Robust Optimization Approach for Design for a Dynamic Cell Formation Considering Labor Utilization: Bi-objective Mathematical Mode

    Directory of Open Access Journals (Sweden)

    Hiwa Farughi

    2016-05-01

    Full Text Available In this paper, robust optimization of a bi-objective mathematical model in a dynamic cell formation problem considering labor utilization with uncertain data is carried out. The robust approach is used to reduce the effects of fluctuations of the uncertain parameters with regards to all the possible future scenarios. In this research, cost parameters of the cell formation and demand fluctuations are subject to uncertainty and a mixed-integer programming (MIP model is developed to formulate the related robust dynamic cell formation problem. Then the problem is transformed into a bi-objective linear one. The first objective function seeks to minimize relevant costs of the problem including machine procurement and relocation costs, machine variable cost, inter-cell movement and intra-cell movement costs, overtime cost and labor shifting cost between cells, machine maintenance cost, inventory, holding part cost. The second objective function seeks to minimize total man-hour deviations between cells or indeed labor utilization of the modeled.

  13. The Influence of Surface Morphology of Dense Ca-P Ceramics on Apatite Formation in Dynamic SBF

    Institute of Scientific and Technical Information of China (English)

    2005-01-01

    This study aimed at exploring the effect of surface morphology of dense phosphate calcium (Ca-P) ceramics upon the formation of bone-like apatite in static or dynamic simulated body fluid (SBF). Dense and sandblasted calcium phosphate ceramics were immersed into dynamic SBF flowing at normal physiological speed of body fluid of skeletal muscle.The changes were characterized using SEM, XPS, IR and XRD. Changes can be observed after the sandblasted surface of dense calcium phosphate ceramics had been immersed in SBF for 14 days. XPS analysis results showed that the flake-like structure was composed of Ca, P, C, O; IR analysis result of surface structure of samples showed that there were specific peaks for CO2-3; XRD results indicated the decrease in crystallinity and the increase in amorphous structure. The rough surface was advantageous for the formation of bone-like apatite. Increasing the Ca2+, HPO2-4 concentration of SBF could also enhance the bone like apatite formation. All the results demonstrated that local concentration is a key factor affecting nucleation.

  14. Development and application of laser techniques for studying fuel dynamics and NO formation in engines

    Energy Technology Data Exchange (ETDEWEB)

    Andersson, Oeivind

    2000-11-01

    In this work a number of laser techniques have been applied in new ways for combustion diagnostics in engines. The applications cover small two-stroke engines, ordinary spark ignition (SI) engines, direct-injection spark ignition (DISI) engines, and heavy-duty diesel truck engines. In an investigation of unmodified two-stroke engines running at high engine speed, it has been shown that cycle-resolved laser diagnostics are applicable to real-world engines. The emission of unburned fuel was detected at the exhaust port with successful discrimination against other unburned hydrocarbons. Although a few problems remain to be solved in order to get quantitative concentration data, valuable information can nonetheless be attained using this technique. The technique would benefit from the use of a non-fluorescing lubricant, as that would decrease the background fluorescence. Laser-based techniques also provide a useful tool for studying the fuel dynamics inside the cylinder. In the development of DISI engines it is of particular importance to acquire knowledge about the distribution of fuel around the spark plug. Numerical computer codes are often used as design tools in these applications. Laser techniques are capable of yielding instantaneous multi-point concentration information with high spatial and temporal resolution, making them ideal both for validation of CFD simulations and for testing designs. The feasibility of using laser diagnostics in the development of DISI engines has been shown. Future research should be aimed at simplifying the procedure for quantifying the data, since a fairly simple and reliable technique would be an important asset for the industry. In a more fundamental study, it has been shown that it is possible to simultaneously detect a substance in both liquid and vapour phase. Water was used in the study since it is easily produced in both phases. Liquid drops were detected using spontaneous Raman scattering, whereas the vapour surrounding them

  15. Development and application of laser techniques for studying fuel dynamics and NO formation in engines

    Energy Technology Data Exchange (ETDEWEB)

    Andersson, Oeivind

    2000-11-01

    In this work a number of laser techniques have been applied in new ways for combustion diagnostics in engines. The applications cover small two-stroke engines, ordinary spark ignition (SI) engines, direct-injection spark ignition (DISI) engines, and heavy-duty diesel truck engines. In an investigation of unmodified two-stroke engines running at high engine speed, it has been shown that cycle-resolved laser diagnostics are applicable to real-world engines. The emission of unburned fuel was detected at the exhaust port with successful discrimination against other unburned hydrocarbons. Although a few problems remain to be solved in order to get quantitative concentration data, valuable information can nonetheless be attained using this technique. The technique would benefit from the use of a non-fluorescing lubricant, as that would decrease the background fluorescence. Laser-based techniques also provide a useful tool for studying the fuel dynamics inside the cylinder. In the development of DISI engines it is of particular importance to acquire knowledge about the distribution of fuel around the spark plug. Numerical computer codes are often used as design tools in these applications. Laser techniques are capable of yielding instantaneous multi-point concentration information with high spatial and temporal resolution, making them ideal both for validation of CFD simulations and for testing designs. The feasibility of using laser diagnostics in the development of DISI engines has been shown. Future research should be aimed at simplifying the procedure for quantifying the data, since a fairly simple and reliable technique would be an important asset for the industry. In a more fundamental study, it has been shown that it is possible to simultaneously detect a substance in both liquid and vapour phase. Water was used in the study since it is easily produced in both phases. Liquid drops were detected using spontaneous Raman scattering, whereas the vapour surrounding them

  16. GA Based Test Case Generation Approach for Formation of Efficient Set of Dynamic Slices

    Directory of Open Access Journals (Sweden)

    Debasis Mohapatra

    2011-09-01

    Full Text Available Automated test case generation is an efficient approach for software testing. Slicing of program provides ease to testability and enhances debugging capacity. To generate the dynamic slice, slicing criterionis required in which the input data parameter is the essential component. Most of the research work focuses on deriving the input by random consideration but it simply takes a longest period of time to generate slices that provides the path coverage of Unit Under Test (UUT. This paper generates the optimal test cases by using Genetic Algorithm (GA and Control Flow Graph (CFG, these test cases cover all the independent path present in the CFG. The optimal test cases are supplied as input component of the dynamic slicing criteria. So the dynamic slice criteria that use these optimal test cases as the input generates the efficient dynamic slice set that is helpful in efficient testing and efficient debugging. Here two approaches, first the dynamic slice using node marking and the second by using relevant sets are discussed according to optimal test cases as input component.

  17. Living on the edge: contrasted wood-formation dynamics in Fagus sylvatica and Pinus sylvestris under Mediterranean conditions

    Directory of Open Access Journals (Sweden)

    Edurne eMartinez Del Castillo

    2016-03-01

    Full Text Available Wood formation in European beech (Fagus sylvatica L. and Scots pine (Pinus sylvestris L. was intra-annually monitored to examine plastic responses of the xylem phenology according to altitude in one of the southernmost areas of their distribution range, i.e. in the Moncayo Natural Park, Spain. The monitoring was done from 2011 to 2013 at 1180 and 1580 m a.s.l., corresponding to the lower and upper limits of European beech forest in this region. Microcores containing phloem, cambium and xylem were collected biweekly from twenty-four trees from the beginning of March to the end of November to assess the different phases of wood formation. The samples were prepared for light microscopy to observe the following phenological phases: onset and end of cell production, onset and end of secondary wall formation in xylem cells and onset of cell maturation. The temporal dynamics of wood formation widely differed among years, altitudes and tree species. For Fagus sylvatica, the onset of cambial activity varied between the first week of May and the third week of June. Cambial activity then slowed down and stopped in summer, resulting in a length of growing season of 48–75 days. In contrast, the growing season for Pinus sylvestris started earlier and cambium remained active in autumn, leading to a period of activity varying from 139-170 days. The intra-annual wood-formation pattern is site and species-specific. Comparison with other studies shows a clear latitudinal trend in the duration of wood formation, positive for Fagus sylvatica and negative for Pinus sylvestris.

  18. Dynamical Models for the Formation of Elephant Trunks in H II Regions

    CERN Document Server

    Mackey, Jonathan

    2009-01-01

    The formation of pillars of dense gas at the boundaries of H II Regions is investigated with hydrodynamical numerical simulations including ionising radiation from a point source. We show that shadowing of ionising radiation by an inhomogeneous density field is capable of forming so-called elephant trunks (pillars of dense gas as in e.g. M16) without the assistance of self-gravity, or of ionisation front and cooling instabilities. A large simulation of a density field containing randomly generated clumps of gas is shown to naturally generate elephant trunks with certain clump configurations. These configurations are simulated in isolation and analysed in detail to show the formation mechanism and determine possible observational signatures. Pillars formed by the shadowing mechanism are shown to have rather different velocity profiles depending on the initial gas configuration, but asymmetries mean that the profiles also vary significantly with perspective, limiting their ability to discriminate between format...

  19. BIOGENIC INFLUENCES ON THE FORMATION AND LONG-TERM DYNAMICS OF COHESIVE SEDIMENTS

    Institute of Scientific and Technical Information of China (English)

    Joern V. PROCHNOW; C. SCHWEIM; Juergen KOENGETER

    2001-01-01

    Biogenic stabilization processes that result in the formation of biofilms and interparticle-networks can significantly alter the transport characteristics of finegrained sediment layers. The increase in the threshold of sediment motion can amount to up to several hundred percent. While planctic organisms are involved in the formation of depositing flocs and the early stages of consolidation, the secondary consolidation is controlled by microbial breakdown processes, leading to changes in the mechanical properties of cohesive sediments. While the primary stage of consolidation is completed in days, the secondary processes can last for decades. A preliminary series of erosion tests in an annular flume revealed demonstrated the biogenic impact in the early stages of sediment formation. Surrogate materials were used to simulate the governing properties of natural soft sediments.

  20. Dynamics of LiNbO/sub 3/ optical waveguide formation by CO/sub 2/ laser annealing

    International Nuclear Information System (INIS)

    In comparison with conventional heating in a furnace, surface heating with 10.6 μm radiation from a CO/sub 2/ laser can reduce by an order of magnitude the time required for formation of optical waveguides by diffusion of Ti into LiNbO/sub 3/ crystals. Waveguides formed this way have similar properties to those produced by other methods. To elucidate the dynamics of waveguide formation by laser heating, the authors investigated the temperature distribution in X-cut LiNbO/sub 3/ plates during the titanium oxide indiffusion process. The temperature distribution was determined from a combination of thermocouple, narrow-band infrared probe, optical pyrometer, and surface melting observations. For a nominal (pyrometer) temperature of 1000 C, the surface temperature does not exceed 1090 C

  1. Dynamic Neural Network-Based Pulsed Plasma Thruster (PPT) Fault Detection and Isolation for Formation Flying of Satellites

    Science.gov (United States)

    Valdes, A.; Khorasani, K.

    The main objective of this paper is to develop a dynamic neural network-based fault detection and isolation (FDI) scheme for the Pulsed Plasma Thrusters (PPTs) that are used in the Attitude Control Subsystem (ACS) of satellites that are tasked to perform a formation flying mission. By using data collected from the relative attitudes of the formation flying satellites our proposed "High Level" FDI scheme can detect the pair of thrusters which is faulty, however fault isolation cannot be accomplished. Based on the "High Level" FDI scheme and the DNN-based "Low Level" FDI scheme developed earlier by the authors, an "Integrated" DNN-based FDI scheme is then proposed. To demonstrate the FDI capabilities of the proposed schemes various fault scenarios are simulated.

  2. Dynamics of the tidal fields and formation of star clusters in galaxy mergers

    International Nuclear Information System (INIS)

    In interacting galaxies, strong tidal forces disturb the global morphology of the progenitors and give birth to the long stellar, gaseous and dusty tails often observed. In addition to this destructive effect, tidal forces can morph into a transient, protective setting called compressive mode. Such modes then shelter the matter in their midst by increasing its gravitational binding energy. This thesis focuses on the study of this poorly known regime by quantifying its properties thanks to numerical and analytical tools applied to a spectacular merging system of two galaxies, commonly known as the Antennae galaxies. N-body simulations of this pair yield compressive modes in the regions where observations reveal a burst of star formation. Furthermore, characteristic time- and energy scales of these modes match well those of self-gravitating substructures such as star clusters and tidal dwarf galaxies. Comparisons with star formation rates derived from hydrodynamical runs confirm the correlation between the location of compressive modes and sites where star formation is likely to show enhanced activity. Altogether, these results suggest that the compressive modes of tidal fields plays an important role in the formation and evolution of young clusters, at least in a statistical sense, over a lapse of ∼10 million years. Preliminary results from simulations of stellar associations highlight the importance of embedding the clusters in the evolving background galaxies to account precisely for their morphology and internal evolution. These conclusions have been extended to numerous configurations of interacting galaxies and remain robust to a variation of the main parameters that characterize a merger. We report however a clear anti-correlation between the importance of the compressive mode and the distance between the galaxies. Further studies including hydrodynamics are now underway and will help pin down the exact role of the compressive mode on the formation and later

  3. Massive Clusters in the Inner Regions of NGC 1365: Cluster Formation and Gas Dynamics in Galactic Bars

    CERN Document Server

    Elmegreen, Bruce G; Alloin, Danielle

    2009-01-01

    Cluster formation and gas dynamics in the central regions of barred galaxies are not well understood. This paper reviews the environment of three 10^7 Msun clusters near the inner Lindblad resonance of the barred spiral NGC 1365. The morphology, mass, and flow of HI and CO gas in the spiral and barred regions are examined for evidence of the location and mechanism of cluster formation. The accretion rate is compared with the star formation rate to infer the lifetime of the starburst. The gas appears to move from inside corotation in the spiral region to looping filaments in the interbar region at a rate of ~6 Msun/yr before impacting the bar dustlane somewhere along its length. The gas in this dustlane moves inward, growing in flux as a result of the accretion to ~40 Msun/yr near the ILR. This inner rate exceeds the current nuclear star formation rate by a factor of 4, suggesting continued buildup of nuclear mass for another ~0.5 Gyr. The bar may be only 1-2 Gyr old. Extrapolating the bar flow back in time, w...

  4. High Performance Simulations of Accretion Disk Dynamics and Jet Formations Around Kerr Black Holes

    Science.gov (United States)

    Nishikawa, Ken-Ichi; Mizuno, Yosuke; Watson, Michael

    2007-01-01

    We investigate jet formation in black-hole systems using 3-D General Relativistic Particle-In-Cell (GRPIC) and 3-D GRMHD simulations. GRPIC simulations, which allow charge separations in a collisionless plasma, do not need to invoke the frozen condition as in GRMHD simulations. 3-D GRPIC simulations show that jets are launched from Kerr black holes as in 3-D GRMHD simulations, but jet formation in the two cases may not be identical. Comparative study of black hole systems with GRPIC and GRMHD simulations with the inclusion of radiate transfer will further clarify the mechanisms that drive the evolution of disk-jet systems.

  5. Spontaneous formation of dynamical patterns with fractal fronts in the cyclic lattice Lotka-Volterra model.

    Science.gov (United States)

    Provata, A; Tsekouras, G A

    2003-05-01

    Dynamical patterns, in the form of consecutive moving stripes or rings, are shown to develop spontaneously in the cyclic lattice Lotka-Volterra model, when realized on square lattice, at the reaction limited regime. Each stripe consists of different particles (species) and the borderlines between consecutive stripes are fractal. The interface width w between the different species scales as w(L,t) approximately L(alpha)f(t/L(z)), where L is the linear size of the interface, t is the time, and alpha and z are the static and dynamical critical exponents, respectively. The critical exponents were computed as alpha=0.49+/-0.03 and z=1.53+/-0.13 and the propagating fronts show dynamical characteristics similar to those of the Eden growth models.

  6. Dynamics of ordering processes in annealed dilute systems: Island formation, vacancies at domain boundaries, and compactification

    DEFF Research Database (Denmark)

    Shah, Peter Jivan; Mouritsen, Ole G.

    1990-01-01

    The dynamics of the ordering processes in two-dimensional lattice models with annealed vacancies and nonconserved order parameter is studied as a function of temperature and vacancy concentration by means of Monte Carlo temperature-quenching simulations. The models are Ising antiferromagnets with...... ordering in thin films of Cu3Au alloys with extra Cu.......The dynamics of the ordering processes in two-dimensional lattice models with annealed vacancies and nonconserved order parameter is studied as a function of temperature and vacancy concentration by means of Monte Carlo temperature-quenching simulations. The models are Ising antiferromagnets with...... compactification via coalescence. The domain-size distribution function, which is approximately log-normal, is shown to obey dynamical scaling over a substantial time range for both types of ordering. The growth for the pure systems is found to be described by a power law with the classical growth exponent n=1...

  7. A possible formation mechanism of double-walled and multi-walled carbon nanotube: a molecular dynamics study

    Science.gov (United States)

    Han, Dianrong; Luo, Chenglin; Dai, Yafei; Zhu, Xingfeng

    2016-09-01

    Molecular dynamics simulations based on an empirical potential were performed to study the interaction of graphene nanoribbons and the single-walled carbon nanotubes. The results indicated that a piece of graphene nanoribbon can form a tube structure inside or outside single-walled carbon nanotubes spontaneously under certain condition. Based on this kind of spontaneous phenomenon, we proposed a new possible formation mechanism of double walled carbon nanotube and multi-walled carbon nanotube, and suggested the possibility of controlling the structure of double-walled carbon nanotube and/or multi-walled carbon nanotube.

  8. Dynamics and roles of phragmoplast microfilaments in cell plate formation during cytokinesis of tobacco BY-2 cells

    Institute of Scientific and Technical Information of China (English)

    ZHANG Yan; ZHANG WenJie; BALUSKA Frantisek; MENZEL Diedrik; REN HaiYun

    2009-01-01

    The phragmoplast is a special apparatus that functions in establishing a cell plate in dividing plant cells.It is known that microfilaments (MFs) are involved in constituting phragmoplast structure, but the dynamic distribution and role of phragmoplast MFs are far from being understood. In this study, the precise structure and dynamics of MFs during the initiation and the late lateral expansion of the phragmoplast were observed by using a tobacco BY-2 cell line stably expressing the microfilament reporter construct GFP-f ABD2. Three-dimensional imaging showed that the phragmoplast MFs were initiated by two populations of MFs emerging between the reconstituting daughter nuclei at anaphase, which migrated to the mid-zone and gave rise to two layers of microfilament arrays. FM4-64 stained vesicles accumulated and fused with the cell plate between the two populations of MFs. The two layers of microfilament arrays of phragmoplast with ends overlapped always surrounded the centrifugally expanding cell plate. Partial disruption of MFs at metaphase by low concentration of latrunculin B resulted in the inhibition of the cell plate consolidation and the blockage of cell plate lateral expansion,whereas high concentration of latrunculin B restrained the progression of the cell cycle. Treating the cell after the initiation of phragmoplast led to the cease of the expansion of the cell plate. Our observations provide new insights into the precise structure and dynamics of phragmoplast MFs during cytokinesis and suggest that dynamic phragmoplast MFs are important in cell plate formation.

  9. Dynamical phase transitions and pattern formation induced by a pulse pumping of excitons to a system near a thermodynamic instability

    Science.gov (United States)

    Brazovskii, Serguei; Kirova, Natasha

    2016-08-01

    We suggest a phenomenological theory of dynamical phase transitions and the subsequent spaciotemporal evolution induced by a short optical pulse in a system which is already prone to a thermodynamic instability. We address the case of pumping to excitons whose density contributes additively to the thermodynamic order parameter like for charge-transfer excitons in electronic charge-ordering transitions. To describe both thermodynamic and dynamical effects on equal footing, we adopt for the phase transition a view of the "excitonic insulator" (EI) and suggest a formation of the macroscopic quantum state for the pumped excitons. The double nature of the ensemble of excitons leads to an intricate time evolution: the dynamical transition between number-preserved and phase-locked regimes, macroscopic quantum oscillations from interference between the Bose condensate of excitons, and the ground state of the EI. Modeling for an extended sample shows also stratification in domains of low and high densities which evolve through local dynamical phase transitions and a sequence of domain merges.

  10. Modulational instability and pattern formation in the model of DNA dynamics

    International Nuclear Information System (INIS)

    We report on the analytical and numerical investigation of modulational instability in discrete nonlinear chains, taking the Peyrard-Bishop model of DNA dynamics as an example. It is shown that the original difference differential equation for the DNA dynamics can be reduced to the discrete complex Ginzburg-Landau equation. We derive the modulational instability criterion in this case. Numerical simulations show the validity of the analytical approach with the generation of wave packets provided that the wave number falls in the instability domain. We also show that, modulational instability leads to spontaneous localization of energy in DNA molecule. (author)

  11. Towards the understanding of structure formation and dynamics in bio-nano systems

    DEFF Research Database (Denmark)

    Yakubovich, Alexander V.; Solov'yov, Ilia; Solov'yov, Andrey V.

    2008-01-01

    This paper gives an overview of a number of key structure formation processes involving the well known biomolecular and nano objects such as fullerenes, nanotubes, polypeptides, proteins and DNA molecules. We formulate the problems, describe the main experimental observations and theoretical adva...

  12. The Dynamics of Professional Identity Formation: Graduates' Transitions from Higher Education to Working Life

    Science.gov (United States)

    Nyström, Sofia

    2009-01-01

    This paper explores the development of professional identity as a relationship between professional and personal aspects of life. The focus is on student and novice professional psychologists' and political scientists' processes of professional identity formation in their transition from higher education to working life. Drawing on Wenger's theory…

  13. The dynamics of visual experience, an EEG study of subjective pattern formation.

    Directory of Open Access Journals (Sweden)

    Mark A Elliott

    Full Text Available BACKGROUND: Since the origin of psychological science a number of studies have reported visual pattern formation in the absence of either physiological stimulation or direct visual-spatial references. Subjective patterns range from simple phosphenes to complex patterns but are highly specific and reported reliably across studies. METHODOLOGY/PRINCIPAL FINDINGS: Using independent-component analysis (ICA we report a reduction in amplitude variance consistent with subjective-pattern formation in ventral posterior areas of the electroencephalogram (EEG. The EEG exhibits significantly increased power at delta/theta and gamma-frequencies (point and circle patterns or a series of high-frequency harmonics of a delta oscillation (spiral patterns. CONCLUSIONS/SIGNIFICANCE: Subjective-pattern formation may be described in a way entirely consistent with identical pattern formation in fluids or granular flows. In this manner, we propose subjective-pattern structure to be represented within a spatio-temporal lattice of harmonic oscillations which bind topographically organized visual-neuronal assemblies by virtue of low frequency modulation.

  14. Bulge formation and necking in a polymer tube under dynamic expansion

    DEFF Research Database (Denmark)

    Lindgreen, Britta; Tvergaard, Viggo; Needleman, Alan

    2008-01-01

    Bulging and necking in long thin polymer tubes subjected to increasing internal pressure are analysed numerically. The polymer is characterized by a finite strain elastic-viscoplastic constitutive relation and the calculations are carried out using a dynamic finite element program. Two types...

  15. Transient β-hairpin formation in α-synuclein monomer revealed by coarse-grained molecular dynamics simulation

    Energy Technology Data Exchange (ETDEWEB)

    Yu, Hang; Ma, Wen [Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801 (United States); Center for Biophysics and Computational Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801 (United States); Han, Wei [Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801 (United States); Department of Physics, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801 (United States); Schulten, Klaus, E-mail: kschulte@ks.uiuc.edu [Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801 (United States); Center for Biophysics and Computational Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801 (United States); Department of Physics, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801 (United States)

    2015-12-28

    Parkinson’s disease, originating from the intrinsically disordered peptide α-synuclein, is a common neurodegenerative disorder that affects more than 5% of the population above age 85. It remains unclear how α-synuclein monomers undergo conformational changes leading to aggregation and formation of fibrils characteristic for the disease. In the present study, we perform molecular dynamics simulations (over 180 μs in aggregated time) using a hybrid-resolution model, Proteins with Atomic details in Coarse-grained Environment (PACE), to characterize in atomic detail structural ensembles of wild type and mutant monomeric α-synuclein in aqueous solution. The simulations reproduce structural properties of α-synuclein characterized in experiments, such as secondary structure content, long-range contacts, chemical shifts, and {sup 3}J(H{sub N}H{sub C{sub α}})-coupling constants. Most notably, the simulations reveal that a short fragment encompassing region 38-53, adjacent to the non-amyloid-β component region, exhibits a high probability of forming a β-hairpin; this fragment, when isolated from the remainder of α-synuclein, fluctuates frequently into its β-hairpin conformation. Two disease-prone mutations, namely, A30P and A53T, significantly accelerate the formation of a β-hairpin in the stated fragment. We conclude that the formation of a β-hairpin in region 38-53 is a key event during α-synuclein aggregation. We predict further that the G47V mutation impedes the formation of a turn in the β-hairpin and slows down β-hairpin formation, thereby retarding α-synuclein aggregation.

  16. Dynamics of the Tidal Fields and Formation of Star Clusters in Galaxy Mergers

    CERN Document Server

    Renaud, Florent

    2010-01-01

    In interacting galaxies, strong tidal forces disturb the global morphology of the progenitors and give birth to the long stellar, gaseous and dusty tails often observed. In addition to this destructive effect, tidal forces can morph into a transient, protective setting called compressive mode. Such modes then shelter the matter in their midst by increasing its gravitational binding energy. This thesis focuses on the study of this poorly known regime by quantifying its properties thanks to numerical and analytical tools applied to a spectacular merging system of two galaxies, commonly known as the Antennae galaxies. N-body simulations of this pair yield compressive modes in the regions where observations reveal a burst of star formation. Furthermore, characteristic time- and energy scales of these modes match well those of self-gravitating substructures such as star clusters and tidal dwarf galaxies. These results suggest that the compressive modes of tidal fields plays an important role in the formation and e...

  17. Leader Follower Formation Control of Ground Vehicles Using Dynamic Pixel Count and Inverse Perspective Mapping

    Directory of Open Access Journals (Sweden)

    S.M.Vaitheeswarana

    2014-10-01

    Full Text Available This paper deals with leader-follower formations of non-holonomic mobile robots, introducing a formation control strategy based on pixel counts using a commercial grade electro optics camera. Localization of the leader for motions along line of sight as well as the obliquely inclined directions are considered based on pixel variation of the images by referencing to two arbitrarily designated positions in the image frames. Based on an established relationship between the displacement of the camera movement along the viewing direction and the difference in pixel counts between reference points in the images, the range and the angle estimate between the follower camera and the leader is calculated. The Inverse Perspective Transform is used to account for non linear relationship between the height of vehicle in a forward facing image and its distance from the camera. The formulation is validated with experiments.

  18. Ichnology of the Miocene Güneyce Formation (Southwest Turkey): Oxygenation and Sedimentation Dynamics

    OpenAIRE

    Nielsen, Jan Kresten; GÖRMÜŞ, MUHİTTİN; KANBUR, KUBİLAY UYSAL & SÜVEYLA

    2012-01-01

    The Güneyce Formation is well exposed in the Lake District of southwestern Turkey. It was deposited in the early Miocene in the Neotethys ocean and contains a large variety of trace fossils. The following ichnotaxa were recognized: Chondrites intricatus, C. targionii, ?Cosmorhaphe isp., Helminthopsis isp., Helminthorhaphe flexuosa, Lorenzinia isp., Naviculichnium marginatum, ?Nereites isp., Ophiomorpha rudis, ?Phycosiphon incertum, Planolites beverleyensis, cf. Rhizocorallium isp. and Thalass...

  19. Observational Evidence of Dynamic Star Formation Rate in Milky Way Giant Molecular Clouds

    CERN Document Server

    Lee, Eve J; Murray, Norman

    2016-01-01

    Star formation on galactic scales is known to be a slow process, but whether it is slow on smaller scales is uncertain. We cross-correlate 5469 giant molecular clouds (GMCs) from a new all-sky catalog with 256 star forming complexes (SFCs) to build a sample of 191 SFC-GMC complexes---collections of multiple clouds each matched to 191 SFCs. The total mass in stars harbored by these clouds is inferred from WMAP free-free fluxes. We measure the GMC mass, the virial parameter, the star formation efficiency $\\epsilon$ and the star formation rate per free-fall time $\\epsilon_{\\rm ff}$. Both $\\epsilon$ and $\\epsilon_{\\rm ff}$ range over 3--4 orders of magnitude. We find that 68.3% of the clouds fall within $\\sigma_{\\log\\epsilon}=0.79\\pm0.22\\,{\\rm dex}$ and $\\sigma_{\\log\\epsilon_{\\rm ff}}=0.91\\pm0.22\\,{\\rm dex}$ about the median. Compared to these observed scatters, a simple model with a time independent $\\epsilon_{\\rm ff}$ that depends on the host GMC properties predicts $\\sigma_{\\log\\epsilon_{\\rm ff}}=0.24$. Allowi...

  20. A statistical state dynamics based theory for the formation and equilibration of Saturn's North Polar Jet

    CERN Document Server

    Farrell, Brian F

    2016-01-01

    Coherent jets containing most of the kinetic energy of the flow are a common feature in observations of atmospheric turbulence. In the gaseous planets these jets are maintained by incoherent turbulence excited by small scale convection. Large scale coherent waves are sometimes observed to coexist with the jets; a prominent example being Saturns hexagonal north polar jet (NPJ). Observations of the large scale jet/wave coexistence regime raises the question of identifying the mechanism responsible for forming and maintaining this turbulent state. The coherent planetary scale component of the turbulence arises and is maintained by interaction with the incoherent small-scale turbulence component. It follows that theoretical understanding of the dynamics of the jet/wave/turbulence coexistence regime is facilitated by employing a statistical state dynamics (SSD) model in which the interaction between coherent and incoherent components is explicitly represented. In this work a second order closure implementation of ...

  1. Dynamical formation & scattering of hierarchical triples: Cross sections, Kozai-Lidov oscillations, and collisions

    CERN Document Server

    Antognini, Joseph M O

    2015-01-01

    Dynamical scattering of binaries and triple systems of stars, planets, and compact objects may produce highly inclined triple systems subject to Kozai-Lidov (KL) oscillations, potentially leading to collisions, mergers, Type Ia supernovae, and other phenomena. We present the results of more than 400 million gravitational scattering experiments of binary-binary, triple-single, and triple-binary scattering. We compute the cross sections for all possible outcomes and explore their dependencies on incoming velocity, mass, semi-major axis, and eccentricity, including analytic fits and discussion of the velocity dependence. For the production of new triple systems by scattering we find that compact triples are preferred, with ratios of outer to inner semi-major axes of ~few--100, flat or quasi-thermal eccentricity distributions, and flat distributions in cosine of the mutual inclination. Dynamically formed triples are thus subject to strong KL oscillations, the "eccentric Kozai mechanism," and non-secular effects. ...

  2. Large-Scale Structure Formation with Massive Neutrinos and Dynamical Dark Energy

    CERN Document Server

    Upadhye, Amol; Pope, Adrian; Heitmann, Katrin; Habib, Salman; Finkel, Hal; Frontiere, Nicholas

    2013-01-01

    Over the next decade, cosmological measurements of the large-scale structure of the Universe will be sensitive to the combined effects of dynamical dark energy and massive neutrinos. The matter power spectrum is a key repository of this information. We extend higher-order perturbative methods for computing the power spectrum to investigate these effects over quasi-linear scales. Through comparison with N-body simulations we establish the regime of validity of a Time-Renormalization Group (Time-RG) perturbative treatment that includes dynamical dark energy and massive neutrinos. We also quantify the accuracy of Standard (SPT), Renormalized (RPT) and Lagrangian Resummation (LPT) perturbation theories without massive neutrinos. We find that an approximation that neglects neutrino clustering as a source for matter clustering predicts the Baryon Acoustic Oscillation (BAO) peak position to 0.25% accuracy for redshifts 1 < z < 3, justifying the use of Lagrangian perturbation theory for BAO reconstruction in up...

  3. Human group formation in online guilds and offline gangs driven by a common team dynamic

    Science.gov (United States)

    Johnson, Neil F.; Xu, Chen; Zhao, Zhenyuan; Ducheneaut, Nicolas; Yee, Nicholas; Tita, George; Hui, Pak Ming

    2009-06-01

    Quantifying human group dynamics represents a unique challenge. Unlike animals and other biological systems, humans form groups in both real (offline) and virtual (online) spaces—from potentially dangerous street gangs populated mostly by disaffected male youths to the massive global guilds in online role-playing games for which membership currently exceeds tens of millions of people from all possible backgrounds, age groups, and genders. We have compiled and analyzed data for these two seemingly unrelated offline and online human activities and have uncovered an unexpected quantitative link between them. Although their overall dynamics differ visibly, we find that a common team-based model can accurately reproduce the quantitative features of each simply by adjusting the average tolerance level and attribute range for each population. By contrast, we find no evidence to support a version of the model based on like-seeking-like (i.e., kinship or “homophily”).

  4. Monitoring intra-annual dynamics of wood formation with microcores and dendrometers in Picea abies at two different altitudes.

    Science.gov (United States)

    Cocozza, Claudia; Palombo, Caterina; Tognetti, Roberto; La Porta, Nicola; Anichini, Monica; Giovannelli, Alessio; Emiliani, Giovanni

    2016-07-01

    Seasonal analyses of cambial cell production and day-by-day stem radial increment can help to elucidate how climate modulates wood formation in conifers. Intra-annual dynamics of wood formation were determined with microcores and dendrometers and related to climatic signals in Norway spruce (Picea abies (L.) Karst.). The seasonal dynamics of these processes were observed at two sites of different altitude, Savignano (650 m a.s.l.) and Lavazè (1800 m a.s.l.) in the Italian Alps. Seasonal dynamics of cambial activity were found to be site specific, indicating that the phenology of cambial cell production is highly variable and plastic with altitude. There was a site-specific trend in the number of cells in the wall thickening phase, with the maximum cell production in early July (DOY 186) at Savignano and in mid-July (DOY 200) at Lavazè. The formation of mature cells showed similar trends at the two sites, although different numbers of cells and timing of cell differentiation were visible in the model shapes; at the end of ring formation in 2010, the number of cells was four times higher at Savignano (106.5 cells) than at Lavazè (26.5 cells). At low altitudes, microcores and dendrometers described the radial growth patterns comparably, though the dendrometer function underlined the higher upper asymptote of maximum growth in comparison with the cell production function. In contrast, at high altitude, these functions exhibited different trends. The best model was obtained by fitting functions of the Gompertz model to the experimental data. By combining radial growth and cambial activity indices we defined a model system able to synchronize these processes. Processes of adaptation of the pattern of xylogenesis occurred, enabling P. abies to occupy sites with contrasting climatic conditions. The use of daily climatic variables in combination with plant functional traits obtained by sensors and/or destructive sampling could provide a suitable tool to better

  5. HULIS in nanoaerosol clusters; investigations of surface tension and aggregate formation using molecular dynamics simulations

    Directory of Open Access Journals (Sweden)

    T. Hede

    2011-03-01

    Full Text Available Cloud condensation nuclei act as cores for water vapor condensation, and their composition and chemical properties may enhance or depress the ability for droplet growth. In this study we use molecular dynamics simulations to show that humic-like substances of larger systems (8.6 nm in diameter mimic experimental data well referring to reduction of surface tension. The structural properties examined show the ability for the humic-like substances to aggregate inside the nanoaerosol clusters.

  6. Migrants trafficking and individual strategies: the formation of dynamic channels in international migration

    OpenAIRE

    JOÃO PEIXOTO

    2006-01-01

    In this paper, a discussion of the current modalities of migrants trafficking will be made, taking into account the vast expression that it acquires and its extremely dynamic character. The main empirical base is a recent research project carried out in Portugal, which considered both labour and sex-ual exploitation related flows. The underlying claim is that it is the conjunction of individual aspirations for migration, stringent migration policies and organised intermediary agents that lead...

  7. Human group formation in online guilds and offline gangs driven by common team dynamic

    OpenAIRE

    Johnson, Neil F.; Xu, Chen; Zhao, Zhenyuan; Ducheneaut, Nicolas; Yee, Nicholas; Tita, George; Hui, Pak Ming

    2008-01-01

    Quantifying human group dynamics represents a unique challenge. Unlike animals and other biological systems, humans form groups in both real (offline) and virtual (online) spaces -- from potentially dangerous street gangs populated mostly by disaffected male youths, through to the massive global guilds in online role-playing games for which membership currently exceeds tens of millions of people from all possible backgrounds, age-groups and genders. We have compiled and analyzed data for thes...

  8. Interactions between DNA and histones- a dynamic process of nucleosome formation

    Institute of Scientific and Technical Information of China (English)

    李伟; 王鹏业; 窦硕星; 童培庆

    2003-01-01

    We have studied the dynamic process of interactions between a DNA chain and a histone octamer by numerical simulations. It is found that DNA indeed may wrap around the histone octaner about two turns as in the actual situations. The simulation shows that the interaction potential between DNA and histone is a key factor for the wrapping of DNA, and the temperature is also an important parameter in the process.

  9. Gas dynamics in tidal dwarf galaxies: disc formation at z=0

    CERN Document Server

    Lelli, F; Brinks, E; Bournaud, F; McGaugh, S S; Lisenfeld, U; Weilbacher, P M; Boquien, M; Revaz, Y; Braine, J; Koribalski, B S; Belles, P -E

    2015-01-01

    Tidal dwarf galaxies (TDGs) are recycled objects that form within the collisional debris of interacting/merging galaxies. They are expected to be devoid of non-baryonic dark matter, since they can form only from dissipative material ejected from the discs of the progenitor galaxies. We investigate the gas dynamics in a sample of six bona-fide TDGs around three interacting and post-interacting systems: NGC 4694, NGC 5291, and NGC 7252 ("Atoms for Peace"). For NGC 4694 and NGC 5291 we analyse existing HI data from the Very Large Array (VLA), while for NGC 7252 we present new HI observations from the Jansky VLA together with long-slit and integral-field optical spectroscopy. For all six TDGs, the HI emission can be described by rotating disc models. These HI discs, however, have undergone less than a full rotation since the time of the interaction/merger event, raising the question of whether they are in dynamical equilibrium. Assuming that these discs are in equilibrium, the inferred dynamical masses are consis...

  10. Inhibitory synapse dynamics: coordinated presynaptic and postsynaptic mobility and the major contribution of recycled vesicles to new synapse formation.

    Science.gov (United States)

    Dobie, Frederick A; Craig, Ann Marie

    2011-07-20

    Dynamics of GABAergic synaptic components have been studied previously over milliseconds to minutes, revealing mobility of postsynaptic scaffolds and receptors. Here we image inhibitory synapses containing fluorescently tagged postsynaptic scaffold Gephyrin, together with presynaptic vesicular GABA transporter (VGAT) or postsynaptic GABA(A) receptor γ2 subunit (GABA(A)Rγ2), over seconds to days in cultured rat hippocampal neurons, revealing modes of inhibitory synapse formation and remodeling. Entire synapses were mobile, translocating rapidly within a confined region and exhibiting greater nonstochastic motion over multihour periods. Presynaptic and postsynaptic components moved in unison, maintaining close apposition while translocating distances of several micrometers. An observed flux in the density of synaptic puncta partially resulted from the apparent merging and splitting of preexisting clusters. De novo formation of inhibitory synapses was observed, marked by the appearance of stably apposed Gephyrin and VGAT clusters at sites previously lacking either component. Coclustering of GABA(A)Rγ2 supports the identification of such new clusters as synapses. Nascent synapse formation occurred by gradual accumulation of components over several hours, with VGAT clustering preceding that of Gephyrin and GABA(A)Rγ2. Comparing VGAT labeling by active uptake of a luminal domain antibody with post hoc immunocytochemistry indicated that recycling vesicles from preexisting boutons significantly contribute to vesicle pools at the majority of new inhibitory synapses. Although new synapses formed primarily on dendrite shafts, some also formed on dendritic protrusions, without apparent interconversion. Altogether, the long-term imaging of GABAergic presynaptic and postsynaptic components reveals complex dynamics and perpetual remodeling with implications for mechanisms of assembly and synaptic integration.

  11. The mechanism of the initial step of germanosilicate formation in solution: a first-principles molecular dynamics study.

    Science.gov (United States)

    Trinh, Thuat T; Rozanska, Xavier; Delbecq, Françoise; Tuel, Alain; Sautet, Philippe

    2016-06-01

    The condensation reactions between Ge(OH)4 and Si(OH)4 units in solution are studied to understand the mechanism and stable species during the initial steps of the formation process of Ge containing zeolites under basic conditions. The free energy of formation of (OH)3Ge-O-Ge-(OH)2O(-), (OH)3Si-O-Si-(OH)2O(-), (OH)3Ge-O-Si-(OH)2O(-) and (OH)3Si-O-Ge-(OH)2O(-) dimers is calculated with ab initio molecular dynamics and thermodynamic integration, including an explicit description of the water solvent molecules. Calculations show that the attack of the conjugated base (Ge(OH)3O(-) and Si(OH)3O(-)) proceeds with a smaller barrier at the Ge center. In addition, the formation of the pure germanate dimer is more favorable than that of the germano-silicate structure. These results explain the experimental observation of Ge-Ge and Si-Ge dimer species in solutions, with a few Si-Si ones. PMID:27172391

  12. Insights into the formation and dynamics of coignimbrite plumes from one-dimensional models

    Science.gov (United States)

    Engwell, S. L.; de'Michieli Vitturi, M.; Esposti Ongaro, T.; Neri, A.

    2016-06-01

    Coignimbrite plumes provide a common and effective mechanism by which large volumes of fine-grained ash are injected into the atmosphere. Nevertheless, controls on formation of these plumes as a function of eruptive conditions are still poorly constrained. Herein, two 1-D axysymmetric steady state models were coupled, the first describing the parent pyroclastic density current and the second describing plume rise. Global sensitivity analysis is applied to investigate controls on coignimbrite plume formation and describe coignimbrite source and the maximum plume height attained. For a range of initial mass flow rates between 108 and 1010 kg/s, modeled liftoff distance (the distance at which neutral buoyancy is attained), assuming radial supercritical flow, is controlled by the initial flow radius, gas mass fraction, flow thickness, and temperature. The predicted decrease in median grain size between flow initiation and plume liftoff is negligible. Calculated initial plume vertical velocities, assuming uniform liftoff velocity over the pyroclastic density current invasion area, are much greater (several tens of m/s) than those previously used in modeling coignimbrite plumes (1 m/s). Such velocities are inconsistent with the fine grain size of particles lofted into coignimbrite plumes, highlighting an unavailability of large clasts, possibly due to particle segregation within the flow, prior to plume formation. Source radius and initial vertical velocity have the largest effect on maximum plume height, closely followed by initial temperature. Modeled plume heights are between 25 and 47 km, comparable with Plinian eruption columns, highlighting the potential of such events for distributing fine-grained ash over significant areas.

  13. Charge Formation, Recombination, and Sweep-Out Dynamics in Organic Solar Cells

    OpenAIRE

    Cowan, Sarah R.; Banerji, Natalie; Leong, Wei Lin; Heeger, Alan J.

    2012-01-01

    This article presents a critical discussion of the various physical processes occurring in organic bulk heterojunction (BHJ) solar cells based on recent experimental results. The investigations span from photoexcitation to charge separation, recombination, and sweep-out to the electrodes. Exciton formation and relaxation in poly[N-9?-hepta-decanyl-2,7-carbazole-alt-5,5-(4',7'-di-2-thienyl-2',1',3'-benzothiadiazole) (PCDTBT) and poly-3(hexylthiophene) (P3HT) are discussed based on a fluorescen...

  14. Coupling discharge and gas dynamics in streamer-less spark formation in supercritical N2

    Science.gov (United States)

    Agnihotri, Ashutosh; Hundsdorfer, Willem; Ebert, Ute

    2016-07-01

    A two-dimensional cylindrically symmetric model is developed to study the streamer-less spark formation in a short gap on the timescale of ion motion. It incorporates the coupling between the electric discharge and the gas through the heat generated by the discharge and the consecutive gas expansion. The model is employed to study electrical breakdown in supercritical N2. We present the simulation results of gas heating by the electrical discharge and the effect of gas expansion on the electrical discharge.

  15. Cluster formation restricts dynamic nuclear polarization of xenon in solid mixtures

    DEFF Research Database (Denmark)

    Kuzma, N. N.; Pourfathi, M.; Kara, H.;

    2012-01-01

    During dynamic nuclear polarization (DNP) at 1.5 K and 5 T, Xe-129 nuclear magnetic resonance (NMR) spectra of a homogeneous xenon/1-propanol/trityl-radical solid mixture exhibit a single peak, broadened by H-1 neighbors. A second peak appears upon annealing for several hours at 125 K. Its....... Subsequent DNP system modifications designed to reduce the overheating resulted in four-fold increase of Xe-129 polarization, from 5.3% to 21%. (C) 2012 American Institute of Physics. [http://dx.doi.org/10.1063/1.4751021]...

  16. DNA Methylation Dynamics Regulate the Formation of a Regenerative Wound Epithelium during Axolotl Limb Regeneration.

    Science.gov (United States)

    Aguilar, Cristian; Gardiner, David M

    2015-01-01

    The formation of a blastema during regeneration of an axolotl limb involves important changes in the behavior and function of cells at the site of injury. One of the earliest events is the formation of the wound epithelium and subsequently the apical epidermal cap, which involves in vivo dedifferentiation that is controlled by signaling from the nerve. We have investigated the role of epigenetic modifications to the genome as a possible mechanism for regulating changes in gene expression patterns of keratinocytes of the wound and blastema epithelium that are involved in regeneration. We report a modulation of the expression DNMT3a, a de novo DNA methyltransferase, within the first 72 hours post injury that is dependent on nerve signaling. Treatment of skin wounds on the upper forelimb with decitabine, a DNA methyltransferase inhibitor, induced changes in gene expression and cellular behavior associated with a regenerative response. Furthermore, decitabine-treated wounds were able to participate in regeneration while untreated wounds inhibited a regenerative response. Elucidation of the specific epigenetic modifications that mediate cellular dedifferentiation likely will lead to insights for initiating a regenerative response in organisms that lack this ability.

  17. DNA Methylation Dynamics Regulate the Formation of a Regenerative Wound Epithelium during Axolotl Limb Regeneration.

    Directory of Open Access Journals (Sweden)

    Cristian Aguilar

    Full Text Available The formation of a blastema during regeneration of an axolotl limb involves important changes in the behavior and function of cells at the site of injury. One of the earliest events is the formation of the wound epithelium and subsequently the apical epidermal cap, which involves in vivo dedifferentiation that is controlled by signaling from the nerve. We have investigated the role of epigenetic modifications to the genome as a possible mechanism for regulating changes in gene expression patterns of keratinocytes of the wound and blastema epithelium that are involved in regeneration. We report a modulation of the expression DNMT3a, a de novo DNA methyltransferase, within the first 72 hours post injury that is dependent on nerve signaling. Treatment of skin wounds on the upper forelimb with decitabine, a DNA methyltransferase inhibitor, induced changes in gene expression and cellular behavior associated with a regenerative response. Furthermore, decitabine-treated wounds were able to participate in regeneration while untreated wounds inhibited a regenerative response. Elucidation of the specific epigenetic modifications that mediate cellular dedifferentiation likely will lead to insights for initiating a regenerative response in organisms that lack this ability.

  18. Carrier Formation Dynamics of Organic Photovoltaics as Investigated by Time-Resolved Spectroscopy

    Directory of Open Access Journals (Sweden)

    Kouhei Yonezawa

    2012-01-01

    Full Text Available Bulk heterojunction (BHJ based on a donor (D polymer and an acceptor (A fullerene derivative is a promising organic photovoltaics (OPV. In order to improve the incident photon-to-current efficiency (IPCE of the BHJ solar cell, a comprehensive understanding of the ultrafast dynamics of excited species, such as singlet exciton (D*, interfacial charge-transfer (CT state, and carrier (D+, is indispensable. Here, we performed femtosecond time-resolved spectroscopy of two prototypical BHJ blend films: poly(3-hexylthiophene (P3HT/[6,6]-phenyl C61-butyric acid methyl ester (PCBM blend film and poly(9,9′-dioctylfluorene-co-bithiophene (F8T2/[6,6]-phenyl C71-butyric acid methyl ester (PC70BM blend film. We decomposed differential absorption spectra into fast, slow, and constant components via two-exponential fitting at respective probe photon energies. The decomposition procedure clearly distinguished photoinduced absorptions (PIAs due to D*, CT, and D+. Based on these assignments, we will compare the charge dynamics between the F8T2/PC70BM and P3HT/PCBM blend films.

  19. Varicella-zoster virus induces the formation of dynamic nuclear capsid aggregates

    Energy Technology Data Exchange (ETDEWEB)

    Lebrun, Marielle [University of Liege (ULg), GIGA-Infection Immunity and Inflammation, Laboratory of Virology and Immunology, Liege (Belgium); Thelen, Nicolas; Thiry, Marc [University of Liege (ULg), GIGA-Neurosciences, Laboratory of Cellular and Tissular Biology, Liege (Belgium); Riva, Laura; Ote, Isabelle; Condé, Claude; Vandevenne, Patricia [University of Liege (ULg), GIGA-Infection Immunity and Inflammation, Laboratory of Virology and Immunology, Liege (Belgium); Di Valentin, Emmanuel [University of Liege (ULg), GIGA-Viral Vectors Platform, Liege (Belgium); Bontems, Sébastien [University of Liege (ULg), GIGA-Infection Immunity and Inflammation, Laboratory of Virology and Immunology, Liege (Belgium); Sadzot-Delvaux, Catherine, E-mail: csadzot@ulg.ac.be [University of Liege (ULg), GIGA-Infection Immunity and Inflammation, Laboratory of Virology and Immunology, Liege (Belgium)

    2014-04-15

    The first step of herpesviruses virion assembly occurs in the nucleus. However, the exact site where nucleocapsids are assembled, where the genome and the inner tegument are acquired, remains controversial. We created a recombinant VZV expressing ORF23 (homologous to HSV-1 VP26) fused to the eGFP and dually fluorescent viruses with a tegument protein additionally fused to a red tag (ORF9, ORF21 and ORF22 corresponding to HSV-1 UL49, UL37 and UL36). We identified nuclear dense structures containing the major capsid protein, the scaffold protein and maturing protease, as well as ORF21 and ORF22. Correlative microscopy demonstrated that the structures correspond to capsid aggregates and time-lapse video imaging showed that they appear prior to the accumulation of cytoplasmic capsids, presumably undergoing the secondary egress, and are highly dynamic. Our observations suggest that these structures might represent a nuclear area important for capsid assembly and/or maturation before the budding at the inner nuclear membrane. - Highlights: • We created a recombinant VZV expressing the small capsid protein fused to the eGFP. • We identified nuclear dense structures containing capsid and procapsid proteins. • Correlative microscopy showed that the structures correspond to capsid aggregates. • Procapsids and partial capsids are found within the aggregates of WT and eGFP-23 VZV. • FRAP and FLIP experiments demonstrated that they are dynamic structures.

  20. Dynamic Modelling Reveals 'Hotspots' on the Pathway to Enzyme-Substrate Complex Formation.

    Directory of Open Access Journals (Sweden)

    Shane E Gordon

    2016-03-01

    Full Text Available Dihydrodipicolinate synthase (DHDPS catalyzes the first committed step in the diaminopimelate pathway of bacteria, yielding amino acids required for cell wall and protein biosyntheses. The essentiality of the enzyme to bacteria, coupled with its absence in humans, validates DHDPS as an antibacterial drug target. Conventional drug design efforts have thus far been unsuccessful in identifying potent DHDPS inhibitors. Here, we make use of contemporary molecular dynamics simulation and Markov state models to explore the interactions between DHDPS from the human pathogen Staphylococcus aureus and its cognate substrate, pyruvate. Our simulations recover the crystallographic DHDPS-pyruvate complex without a priori knowledge of the final bound structure. The highly conserved residue Arg140 was found to have a pivotal role in coordinating the entry of pyruvate into the active site from bulk solvent, consistent with previous kinetic reports, indicating an indirect role for the residue in DHDPS catalysis. A metastable binding intermediate characterized by multiple points of intermolecular interaction between pyruvate and key DHDPS residue Arg140 was found to be a highly conserved feature of the binding trajectory when comparing alternative binding pathways. By means of umbrella sampling we show that these binding intermediates are thermodynamically metastable, consistent with both the available experimental data and the substrate binding model presented in this study. Our results provide insight into an important enzyme-substrate interaction in atomistic detail that offers the potential to be exploited for the discovery of more effective DHDPS inhibitors and, in a broader sense, dynamic protein-drug interactions.

  1. Varicella-zoster virus induces the formation of dynamic nuclear capsid aggregates

    International Nuclear Information System (INIS)

    The first step of herpesviruses virion assembly occurs in the nucleus. However, the exact site where nucleocapsids are assembled, where the genome and the inner tegument are acquired, remains controversial. We created a recombinant VZV expressing ORF23 (homologous to HSV-1 VP26) fused to the eGFP and dually fluorescent viruses with a tegument protein additionally fused to a red tag (ORF9, ORF21 and ORF22 corresponding to HSV-1 UL49, UL37 and UL36). We identified nuclear dense structures containing the major capsid protein, the scaffold protein and maturing protease, as well as ORF21 and ORF22. Correlative microscopy demonstrated that the structures correspond to capsid aggregates and time-lapse video imaging showed that they appear prior to the accumulation of cytoplasmic capsids, presumably undergoing the secondary egress, and are highly dynamic. Our observations suggest that these structures might represent a nuclear area important for capsid assembly and/or maturation before the budding at the inner nuclear membrane. - Highlights: • We created a recombinant VZV expressing the small capsid protein fused to the eGFP. • We identified nuclear dense structures containing capsid and procapsid proteins. • Correlative microscopy showed that the structures correspond to capsid aggregates. • Procapsids and partial capsids are found within the aggregates of WT and eGFP-23 VZV. • FRAP and FLIP experiments demonstrated that they are dynamic structures

  2. Dynamics of plasma expansion and shockwave formation in femtosecond laser-ablated aluminum plumes in argon gas at atmospheric pressures

    Science.gov (United States)

    Miloshevsky, Alexander; Harilal, Sivanandan S.; Miloshevsky, Gennady; Hassanein, Ahmed

    2014-04-01

    Plasma expansion with shockwave formation during laser ablation of materials in a background gasses is a complex process. The spatial and temporal evolution of pressure, temperature, density, and velocity fields is needed for its complete understanding. We have studied the expansion of femtosecond (fs) laser-ablated aluminum (Al) plumes in Argon (Ar) gas at 0.5 and 1 atmosphere (atm). The expansion of the plume is investigated experimentally using shadowgraphy and fast-gated imaging. The computational fluid dynamics (CFD) modeling is also carried out. The position of the shock front measured by shadowgraphy and fast-gated imaging is then compared to that obtained from the CFD modeling. The results from the three methods are found to be in good agreement, especially during the initial stage of plasma expansion. The computed time- and space-resolved fields of gas-dynamic parameters have provided valuable insights into the dynamics of plasma expansion and shockwave formation in fs-pulse ablated Al plumes in Ar gas at 0.5 and 1 atm. These results are compared to our previous data on nanosecond (ns) laser ablation of Al [S. S. Harilal et al., Phys. Plasmas 19, 083504 (2012)]. It is observed that both fs and ns plumes acquire a nearly spherical shape at the end of expansion in Ar gas at 1 atm. However, due to significantly lower pulse energy of the fs laser (5 mJ) compared to pulse energy of the ns laser (100 mJ) used in our studies, the values of pressure, temperature, mass density, and velocity are found to be smaller in the fs laser plume, and their time evolution occurs much faster on the same time scale. The oscillatory shock waves clearly visible in the ns plume are not observed in the internal region of the fs plume. These experimental and computational results provide a quantitative understanding of plasma expansion and shockwave formation in fs-pulse and ns-pulse laser ablated Al plumes in an ambient gas at atmospheric pressures.

  3. Dynamics of electron-capture-to-continuum (ECC) formation in slow ion-atom collisions

    Energy Technology Data Exchange (ETDEWEB)

    Afaneh, F [Physics Department, The Hashemite University, PO Box 150459, Zarqa 13115 (Jordan); Schmidt, L Ph H [Institut fuer Kernphysik, Max-von-Laue-Str. 1, 60438 Frankfurt (Germany); Schoeffler, M [Institut fuer Kernphysik, Max-von-Laue-Str. 1, 60438 Frankfurt (Germany); Stiebing, K E [Institut fuer Kernphysik, Max-von-Laue-Str. 1, 60438 Frankfurt (Germany); Al-Jundi, J [Physics Department, The Hashemite University, PO Box 150459, Zarqa 13115 (Jordan); Schmidt-Boecking, H [Institut fuer Kernphysik, Max-von-Laue-Str. 1, 60438 Frankfurt (Germany); Doerner, R [Institut fuer Kernphysik, Max-von-Laue-Str. 1, 60438 Frankfurt (Germany)

    2007-05-28

    The zero-degree ejected-electron spectrum for protons incident on He at 25 keV is examined experimentally using the COLTRIMS technique. The momentum distribution of the emitted electrons for the transfer ionization (TI) reaction channel is measured in coincidence with the momentum vectors of the recoil ion and the scattered projectile. The momentum distribution of the electrons emitted around zero degree in the forward direction for the TI reaction channel shows two prominent structures: the electron-capture-to-the-continuum (ECC) peak and the saddle-point peak. From the measured fully differential electron emission cross sections with respect to the scattering plane we can deduce that the main ECC formation mechanism is electron promotion via quasimolecular orbitals.

  4. Asymmetric distribution of gas in the large magellanic cloud and dynamical condition for globular cluster formation

    International Nuclear Information System (INIS)

    Highly asymmetric distributions of HI and CO gases in LMC (Large Magellanic Cloud) are reproduced by taking into account hydrodynamical collision between LMC and SMC (Small Magellanic cloud) 0.15 to 0.2 Gyr ago. Two-valued rotation curves in HI gas are due, respectively, to gas clouds accelerated by collision and to those escaped therefrom. It is also concluded that a large-scale noncircular motion of >50 to 100 km s-1 and a resultant compression of >104 (solar mass) in mass-scale are necessary conditions for globular cluster formation from interstellar gas. This process seems to be independent of the chemical abundance of heavy elements in the range -2.0<[Fe/H]<0. (author)

  5. Planet formation in binaries: dynamics of planetesimals perturbed by the eccentric protoplanetary disk and the secondary

    CERN Document Server

    Silsbee, Kedron

    2013-01-01

    Detections of planets in eccentric, close (separations of ~20 AU) binary systems such as \\alpha Cen or \\gamma Cep provide an important test of planet formation theories. Gravitational perturbations from the companion are expected to excite high planetesimal eccentricities resulting in destruction, rather than growth, of objects with sizes of up to several hundred km in collisions of similar-size bodies. It was recently suggested that gravity of a massive axisymmetric gaseous disk in which planetesimals are embedded drives rapid precession of their orbits, suppressing eccentricity excitation. However, disks in binaries are themselves expected to be eccentric, leading to additional planetesimal excitation. Here we develop secular theory of eccentricity evolution for planetesimals perturbed by the gravity of an elliptical protoplanetary disk (neglecting gas drag) and the companion. For the first time we derive an expression for the disturbing function due to an eccentric disk, which can be used for a variety of ...

  6. Dynamics of Crystal Formation in the Greenland NorthGRIP Ice Core

    CERN Document Server

    Mathiesen, J; Jensen, M H; Levinsen, M; Olesen, P; Dahl-Jensen, D; Svensson, A; Mathiesen, Joachim; Ferkinghoff-Borg, Jesper; Jensen, Mogens H.; Levinsen, Mogens; Olesen, Poul; Dahl-Jensen, Dorthe; Svensson, Anders

    2003-01-01

    The North Greenland Ice Core Project (NorthGRIP) provides paleoclimatic information back to at least 115 kyr before present [Dahl-Jensen et al., 2002]. Each year, precipitation on the ice sheet covers it with a new layer of snow, which gradually transforms into ice crystals as the layer sinks into the ice sheet. The size distribution of ice crystals has been measured at selected depths in the upper 880 m of the NorthGRIP ice core [Svensson et al., 2003b], which cover a time span of 5300 years. The distributions change with time toward a universal curve, indicating a common underlying physical process in the formation of crystals. We identify this process as an interplay between fragmentation of the crystals and diffusion of their grain boundaries. The process is described by a two-parameter differential equation to which we obtain the exact solution. The solution is in excellent agreement with the experimentally observed distributions.

  7. Formation of lightning in terms of opinion dynamics in three dimension

    CERN Document Server

    Tuncay, C

    2006-01-01

    Formation of a lightning within a cloud, between clouds and towards the earth is studied as an application of sociophysics. The three dimensional society is sky or cloud, which has members as electrically charged clouds (in sky) or patches (in cloud). Members interact with the neighboring ones and all are convinced to average their charges (opinion). Yet, big external drives (mass media) as winds and turbulences may load new charges or may force the present ones to accumulate temporally at a site. For a lightning towards the earth, similarly charged clouds in sky (patches carrying big charges in a cloud) are expected to come close to each other. In all, discharging process is nothing, but what is called lightning.

  8. Are the Formation and Abundances of Metal-Poor Stars the Result of Dust Dynamics?

    CERN Document Server

    Hopkins, Philip F

    2015-01-01

    Large dust grains can fluctuate dramatically in their local density, relative to gas, in neutral, turbulent disks. Small, high-redshift galaxies (before reionization) represent ideal environments for this process. We show via simple arguments and simulations that order-of-magnitude fluctuations are expected in local abundances of large grains under these conditions. This can have important consequences for star formation and stellar abundances in extremely metal-poor stars. Low-mass stars could form in dust-enhanced regions almost immediately after some dust forms, even if the galaxy-average metallicity is too low for fragmentation to occur. The abundances of these 'promoted' stars may contain interesting signatures, as the CNO abundances (concentrated in large carbonaceous grains and ices) and Mg and Si (in large silicate grains) can be enhanced or fluctuate independently. Remarkably, otherwise puzzling abundance patterns of some metal-poor stars can be well-fit by standard core-collapse SNe yields, if we al...

  9. Lipid Droplet Formation, Their Localization and Dynamics during Leishmania major Macrophage Infection.

    Directory of Open Access Journals (Sweden)

    Sameh Rabhi

    Full Text Available Leishmania, the causative agent of vector-borne diseases, known as leishmaniases, is an obligate intracellular parasite within mammalian hosts. The outcome of infection depends largely on the activation status of macrophages, the first line of mammalian defense and the major target cells for parasite replication. Understanding the strategies developed by the parasite to circumvent macrophage defense mechanisms and to survive within those cells help defining novel therapeutic approaches for leishmaniasis. We previously showed the formation of lipid droplets (LDs in L. major infected macrophages. Here, we provide novel insights on the origin of the formed LDs by determining their cellular distribution and to what extent these high-energy sources are directed to the proximity of Leishmania parasites. We show that the ability of L. major to trigger macrophage LD accumulation is independent of parasite viability and uptake and can also be observed in non-infected cells through paracrine stimuli suggesting that LD formation is from cellular origin. The accumulation of LDs is demonstrated using confocal microscopy and live-cell imagin in parasite-free cytoplasmic region of the host cell, but also promptly recruited to the proximity of Leishmania parasites. Indeed LDs are observed inside parasitophorous vacuole and in parasite cytoplasm suggesting that Leishmania parasites besides producing their own LDs, may take advantage of these high energy sources. Otherwise, these LDs may help cells defending against parasitic infection. These metabolic changes, rising as common features during the last years, occur in host cells infected by a large number of pathogens and seem to play an important role in pathogenesis. Understanding how Leishmania parasites and different pathogens exploit this LD accumulation will help us define the common mechanism used by these different pathogens to manipulate and/or take advantage of this high-energy source.

  10. From dynamic expression patterns to boundary formation in the presomitic mesoderm.

    Directory of Open Access Journals (Sweden)

    Hendrik B Tiedemann

    Full Text Available The segmentation of the vertebrate body is laid down during early embryogenesis. The formation of signaling gradients, the periodic expression of genes of the Notch-, Fgf- and Wnt-pathways and their interplay in the unsegmented presomitic mesoderm (PSM precedes the rhythmic budding of nascent somites at its anterior end, which later develops into epithelialized structures, the somites. Although many in silico models describing partial aspects of somitogenesis already exist, simulations of a complete causal chain from gene expression in the growth zone via the interaction of multiple cells to segmentation are rare. Here, we present an enhanced gene regulatory network (GRN for mice in a simulation program that models the growing PSM by many virtual cells and integrates WNT3A and FGF8 gradient formation, periodic gene expression and Delta/Notch signaling. Assuming Hes7 as core of the somitogenesis clock and LFNG as modulator, we postulate a negative feedback of HES7 on Dll1 leading to an oscillating Dll1 expression as seen in vivo. Furthermore, we are able to simulate the experimentally observed wave of activated NOTCH (NICD as a result of the interactions in the GRN. We esteem our model as robust for a wide range of parameter values with the Hes7 mRNA and protein decays exerting a strong influence on the core oscillator. Moreover, our model predicts interference between Hes1 and HES7 oscillators when their intrinsic frequencies differ. In conclusion, we have built a comprehensive model of somitogenesis with HES7 as core oscillator that is able to reproduce many experimentally observed data in mice.

  11. Rotating Shallow Water Dynamics: Extra Invariant and the Formation of Zonal Jets

    CERN Document Server

    Balk, Alexander M; Weichman, Peter B

    2011-01-01

    We show that rotating shallow water dynamics possesses an approximate (adiabatic-type) positive quadratic invariant, which exists not only at mid-latitudes (where its analogue in the quasigeostrophic equation has been previously investigated), but near the equator as well (where the quasigeostrophic equation is inapplicable). Deriving the extra invariant, we find "small denominators" of two kinds: (1) due to the triad resonances (as in the case of the quasigeostrophic equation) and (2) due to the equatorial limit, when the Rossby radius of deformation becomes infinite. We show that the "small denominators" of both kinds can be canceled. The presence of the extra invariant can lead to the generation of zonal jets. We find that this tendency should be especially pronounced near the equator. Similar invariant occurs in magnetically confined fusion plasmas and can lead to the emergence of zonal flows.

  12. Dynamical aspects of particle emission in binary dissipative collisions -effects on hot-nuclei formation

    International Nuclear Information System (INIS)

    Characteristics of charged-particle emission in heavy-ion reactions have been studied in the framework of the semiclassical Landau-Vlasov approach for the 40Ar + 27Al collisions at 65 MeV/u. The reaction mechanism is dominated by binary dissipative collisions. After an abundant prompt emission coming from the overlapping region between the target and the projectile, two excited nuclei, the quasi-target and the quasi-projectile, emerge from the collision. To shed some light on the role played by dynamical effects, light-charged particle observables, which are currently used as an experimental signature a of hot equilibrated nucleus, have been carefully investigated. (K.A.)

  13. The effect of simultaneous size reduction and transient network formation on the dynamics of microemulsions

    Science.gov (United States)

    Amirkhani, Masoud; Sharifi, Soheil; Marti, Othmar

    2012-09-01

    We studied a mixture of C12E5 microemulsion with an end-capped hydrophobically modified polymer (C12-PEO-C12). The end-capped polymer adsorbed on the core of the microemulsion, changed the bending properties of the interface and connected two nearby droplets. The core size and width of the structure factor of the microemulsion decreased upon adding the end-capped polymer. For all polymer concentrations, two relaxational modes corresponding to different diffusion coefficients were observed. The fast and slow diffusion coefficients showed a repulsive and an attractive interaction, respectively. The results of both small-angle x-ray scattering and dynamic light scattering suggested that fast relaxation is affected by size reduction and increasing the repulsive interaction between droplets.

  14. Thermalization of the quark-gluon plasma and dynamical formation of Bose-Einstein Condensate

    CERN Document Server

    Liao, Jinfeng

    2012-01-01

    We report recent progress on understanding the thermalization of the quark-gluon plasma during the early stage in a heavy ion collision. The initially high overpopulation in the pre-equilibrium gluonic matter (``glasma'') is shown to play a crucial role. The strongly interacting nature (and thus fast evolution) naturally arises as an {\\em emergent property} of this pre-equilibrium matter where the intrinsic coupling is weak but the highly occupied gluon states coherently amplify the scattering. A possible transient Bose-Einstein Condensate is argued to form dynamically on a rather general ground. We develop the kinetic approach for describing this highly overpopulated system and find approximate scaling solutions as well as numerically study the onset of condensation. Finally we discuss possible phenomenological implications.

  15. Molecular dynamics simulation of {beta}-sheet formation in self-assembled peptide amphiphile fibers

    Energy Technology Data Exchange (ETDEWEB)

    Lee, One-Sun; Liu Yamei; Schatz, George C., E-mail: schatz@chem.northwestern.edu [Northwestern University, Department of Chemistry (United States)

    2012-08-15

    The influence of amino acid sequence on the secondary structure of peptide amphiphile (PAs) cylindrical micelles and fibers that are self-assembled in solution is studied using molecular dynamics simulations. Simulations for two choices of PAs were performed, starting with structures that have the correct overall shape, but which restructure considerably during the simulation, with one fiber being composed of valine rich PAs and the other of alanine rich PAs. Self-assembly is similar in both simulations, with stable fibers (diameter is 7.7-8 nm) obtained after 40 ns. We find that the valine rich PA fiber has a higher {beta}-sheet population than the alanine rich fiber, and that the number of hydrogen bonds is higher. This behavior of the valine rich fiber is consistent with experimental measurements of higher stiffness, and it shows that stiffness can be varied while still maintaining self-assembly.

  16. Molecular Dynamics of Film Formation of Metal Tetra sulfonated Phthalocyanine and Poly Amidoamine Demanders

    International Nuclear Information System (INIS)

    We performed molecular dynamics computer simulations to elucidate the behavior and properties of the metal tetra sulfonated phthalocyanine molecule and the poly(amidoamine) dendrimers in self-assembly depositions, respectively, on poly(allylamine hydrochloride) polymer and on film formed by metal tetra sulfonated phthalocyanine with poly(allylamine hydrochloride). Important physical properties of phthalocyanines were obtained such as the kinetic energy and temperature in situ. By the semiempirical model, we also obtained the UV-Vis absorption spectrum of the film formed by cobalt tetra sulfonated phthalocyanine deposited on poly(allylamine hydrochloride). We performed a study with poly(amidoamine) dendrimers on their deposition time on metal tetra sulfonated phthalocyanine, poly(allylamine hydrochloride) film, and we show the relationship of deposition time with the electrical charge and molecular mass of phthalocyanines. The deposition times of the dendrimers, as a function of their mass, were also elucidated.

  17. Island-dynamics model for mound formation: effect of a step-edge barrier.

    Science.gov (United States)

    Papac, Joe; Margetis, Dionisios; Gibou, Frederic; Ratsch, Christian

    2014-08-01

    We formulate and implement a generalized island-dynamics model of epitaxial growth based on the level-set technique to include the effect of an additional energy barrier for the attachment and detachment of atoms at step edges. For this purpose, we invoke a mixed, Robin-type, boundary condition for the flux of adsorbed atoms (adatoms) at each step edge. In addition, we provide an analytic expression for the requisite equilibrium adatom concentration at the island boundary. The only inputs are atomistic kinetic rates. We present a numerical scheme for solving the adatom diffusion equation with such a mixed boundary condition. Our simulation results demonstrate that mounds form when the step-edge barrier is included, and that these mounds steepen as the step-edge barrier increases. PMID:25215739

  18. Coupled dynamics of mobility and pattern formation in optional public goods games

    CERN Document Server

    Zhong, Li-Xin; Shi, Yong-Dong; Qiu, Tian

    2012-01-01

    In a static environment, optional participation and cooperator agglomeration are found to be beneficial for the occurrence and maintenance of cooperation. In the optional public goods game, the rock-scissors-paper cycles of different strategies yield the oscillatory persistence of cooperation but not different levels of stable cooperation. In this paper, by incorporating population density and individual mobility into the spatial optional public goods game, we study the coevolutionary dynamics of strategy updating and benefit-seeking movement. With low population density and slow movement, an optimal level of cooperation is easy to be reached. Both the increase of population density and the speed-up of free-floating of competing agents will lead to the decrease of cooperation. A log-log relation between the levels of cooperation and the free-floating probability is found. Theoretical analysis indicates that the decrease of cooperator frequency in the present model should result from the increase of the intera...

  19. Thermalization of the quark-gluon plasma and dynamical formation of Bose-Einstein Condensate

    International Nuclear Information System (INIS)

    We report recent progress on understanding the thermalization of the quark-gluon plasma during the early stage in a heavy ion collision. The initially high overpopulation in the pre-equilibrium gluonic matter (glasma) is shown to play a crucial role. The strongly interacting nature (and thus fast evolution) naturally arises as an emergent property of this pre-equilibrium matter where the intrinsic coupling is weak but the highly occupied gluon states coherently amplify the scattering. A possible transient Bose-Einstein Condensate is argued to form dynamically on a rather general ground. We develop the kinetic approach for describing this highly overpopulated system and find approximate scaling solutions as well as numerically study the onset of condensation. Finally we also discuss possible phenomenological implications.

  20. Interactions between marine snow and heterotrophic bacteria: aggregate formation and microbial dynamics

    DEFF Research Database (Denmark)

    Grossart, H.P.; Kiørboe, Thomas; Tang, K.W.;

    2006-01-01

    bacteria depended on phytoplankton growth and aggregation dynamics. The community composition of especially attached bacteria significantly differed between the 2 algal cultures. Our study suggests that phytoplankton aggregation and vertical fluxes are closely linked to interactions between the marine...... well as abundance, colonization behaviour, and community composition of bacteria during the growth of 2 marine diatoms (Thalassiosira weissflogii and Navicula sp.) under axenic and non-axenic conditions. Community composition of free-living and attached bacteria during phytoplankton growth and...... aggregation was studied by amplification of 16S rRNA gene fragments and denaturing gradient gel electrophoresis (DGGE). Our results show that the presence of bacteria was a prerequisite for aggregation of T. weissflogii but not of Navicula sp. Occurrences of distinct populations of free-living and attached...

  1. Geometrical shock dynamics, formation of singularities and topological bifurcations of converging shock fronts

    Science.gov (United States)

    Suramlishvili, Nugzar; Eggers, Jens; Fontelos, Marco

    2014-11-01

    We are concerned with singularities of the shock fronts of converging perturbed shock waves. Our considerations are based on Whitham's theory of geometrical shock dynamics. The recently developed method of local analysis is applied in order to determine generic singularities. In this case the solutions of partial differential equations describing the geometry of the shock fronts are presented as families of smooth maps with state variables and the set of control parameters dependent on Mach number, time and initial conditions. The space of control parameters of the singularities is analysed, the unfoldings describing the deformations of the canonical germs of shock front singularities are found and corresponding bifurcation diagrams are constructed. Research is supported by the Leverhulme Trust, Grant Number RPG-2012-568.

  2. Melt front propagation in dielectrics upon femtosecond laser irradiation: Formation dynamics of a heat-affected layer

    Science.gov (United States)

    Garcia-Lechuga, Mario; Solis, Javier; Siegel, Jan

    2016-04-01

    Several studies in dielectrics have reported the presence of a thin heat-affected layer underneath the ablation crater produced by femtosecond laser irradiation. In this work, we present a time-resolved microscopy technique that is capable of monitoring the formation dynamics of this layer and apply it to the study of a phosphate glass exposed to single pulses below the ablation threshold. A few nanoseconds after laser excitation, a melt front interface can be detected, which propagates into the bulk, gradually slowing down its speed. By means of image analysis combined with optical modeling, we are able to determine the temporal evolution of the layer thickness and its refractive index. Initially, a strong transient decrease in the refractive index is observed, which partially recovers afterwards. The layer resolidifies after approximately 1 μs after excitation, featuring a maximum thickness of several hundreds of nanometers.

  3. Formation of giant molecular clouds in global spiral structures: The role of orbital dynamics and cloud-cloud collisions

    Science.gov (United States)

    Roberts, W. W., Jr.; Stewart, G. R.

    1987-01-01

    The different roles played by orbital dynamics and dissipative cloud-cloud collisions in the formation of giant molecular clouds (GMCs) in a global spiral structure are investigated. The interstellar medium (ISM) is simulated by a system of particles, representing clouds, which orbit in a spiral-perturbed, galactic gravitational field. The overall magnitude and width of the global cloud density distribution in spiral arms is very similar in the collisional and collisionless simulations. The results suggest that the assumed number density and size distribution of clouds and the details of individual cloud-cloud collisions have relatively little effect on these features. Dissipative cloud-cloud collisions play an important steadying role for the cloud system's global spiral structure. Dissipative cloud-cloud collisions also damp the relative velocity dispersion of clouds in massive associations and thereby aid in the effective assembling of GMC-like complexes.

  4. Quantum dot formation and dynamic scaling behavior of SnO2 nanocrystals induced by pulsed delivery

    Science.gov (United States)

    Chen, Z. W.; Lai, J. K. L.; Shek, C. H.

    2006-01-01

    Quantum dot formation and dynamic scaling behavior of SnO2 nanocrystals in coalescence regime for growth by pulsed-laser deposition is explored experimentally and theoretically, and the same is compared with that for continuous vapor deposition such as molecular-beam epitaxy. Using high-resolution transmission electron microscopy, unusual quantum dots of SnO2 nanocrystals are studied. We present kinetic Monte-Carlo simulations for pulsed-laser deposition in the submonolayer regime and give a description of the island distance versus pulse intensity. We found that the scaling exponent for pulsed-laser deposition is 1.28±0.03, which is significantly lower as compared to that for molecular-beam epitaxy (1.62±0.03). Theoretical simulations reveal that this attractive difference can be pursued to the large fraction of multiple droplet coalescence under pulsed vapor delivery.

  5. Compound nucleus formation probability PCN determined within the dynamical cluster-decay model for various "hot" fusion reactions

    Science.gov (United States)

    Kaur, Arshdeep; Chopra, Sahila; Gupta, Raj K.

    2014-08-01

    The compound nucleus (CN) fusion/formation probability PCN is defined and its detailed variations with the CN excitation energy E*, center-of-mass energy Ec .m., fissility parameter χ, CN mass number ACN, and Coulomb interaction parameter Z1Z2 are studied for the first time within the dynamical cluster-decay model (DCM). The model is a nonstatistical description of the decay of a CN to all possible processes. The (total) fusion cross section σfusion is the sum of the CN and noncompound nucleus (nCN) decay cross sections, each calculated as the dynamical fragmentation process. The CN cross section σCN is constituted of evaporation residues and fusion-fission, including intermediate-mass fragments, each calculated for all contributing decay fragments (A1, A2) in terms of their formation and barrier penetration probabilities P0 and P. The nCN cross section σnCN is determined as the quasi-fission (qf) process, where P0=1 and P is calculated for the entrance-channel nuclei. The DCM, with effects of deformations and orientations of nuclei included in it, is used to study the PCN for about a dozen "hot" fusion reactions forming a CN of mass number A ˜100 to superheavy nuclei and for various different nuclear interaction potentials. Interesting results are that PCN=1 for complete fusion, but PCNPCN≪1 due to the nCN contribution, depending strongly on different parameters of the entrance-channel reaction but found to be independent of the nuclear interaction potentials used.

  6. Surface films of short fluorocarbon-hydrocarbon diblocks studied by molecular dynamics simulations: Spontaneous formation of elongated hemimicelles.

    Science.gov (United States)

    Piñeiro, Angel; Prieto, Gerardo; Ruso, Juan M; Verdes, Pedro V; Sarmiento, Félix

    2009-01-15

    Using grazing incidence small-angle X-ray scattering (GISAXS), and atomic force microscopy (AFM) it has been recently demonstrated that linear fluorocarbon-hydrocarbon diblocks (FnHm) self-assemble in water/air interfaces forming elongated and circular hemimicelles. Those structures have been observed for diblocks with at least eight fluorinated carbons. Based on the lack of a collapse pressure for F6H16, and due to the fact that no stable surface pressure values are reached under compression, it has been concluded that these molecules do not form stable monolayers. It has been also suggested that F6H16 and shorter diblocks desorb from the water surface under compression. It is not easy to accept that a significant concentration of so hydrophobic molecules can be stable in aqueous solution even when the employed experimental techniques were not able to clearly detect a well defined structure on the interface. In the present work the adsorption and arrangement of F6H16 and F6H10 at the water surface are studied by molecular dynamics (MD) simulations as a function of the available area per molecule. Starting from a random mixture, the spontaneous formation of elongated hemimicelles is observed for both systems when the area per molecule is higher than approximately 50 A(2). For intermediate areas two pseudo-phases, one rich in hydrocarbons and the other with higher fluorocarbon concentration, are formed. For the systems with less than approximately 30 A(2) available per molecule the formation of multilayers is observed. This is the first time that the dynamics and structure of perfluoroalkane (PFA) films, and in particular of hemimicelles on a liquid surface, are observed and characterized at atomic level.

  7. Dynamics of peat accumulation and marl flat formation in a calcareous fen, midwestern United States

    Science.gov (United States)

    Miner, J.J.; Ketterling, D.B.

    2003-01-01

    The age and sequence of peat accumulation were investigated at a calcareous fen in northeastern Illinois, USA. The purpose of this study was to identify the processes that form and sustain marl flats, which are areas of marl or tufa substrate within the fen that contain numerous rare plant species. Geomorphic, stratigraphic, and radiocarbon evidence was used to establish the processes and chronology of peat accumulation and erosion adjacent to each marl flat. The age of the base of the peat deposit varies greatly throughout the fen, ranging from 14,679 calibrated years before present (cal. years BP) to nearly modern, indicating that colonization of the sand and gravel substrate by peat occurred throughout the period from the Late Pleistocene to present. Adjacent to one marl flat, trends in basal peat age and thickness show that peat accumulation has progressed laterally inward from both sides, suggesting that the marl flat has been infilling with peat progressively by accumulation at the margins since at least 5,370 cal. years BP or longer. A second marl flat in the fen is surrounded by older, thick peat of differing ages on either edge and is bounded by fresh scarps, indicating that the marl flat currently is expanding laterally by erosion into the preexisting peat blanket. These two examples suggest a continuously repeating process, where erosion of the accumulated peat blanket forms a marl flat, which is later covered by peat accumulation. Trends in basal peat age elsewhere in the fen suggest that other marl flats may have existed in the past that have been completely infilled with peat. This study suggests that marl flat formation is a natural process that has been occurring for millennia, continuously creating habitat for the rare plant species that occupy marl flats. There is no evidence that the marl flats at this site are indicative of anthropogenic disturbance, so that management options for these areas are limited to maintaining the quality and quantity

  8. Step dynamics and oxide formation during CO oxidation over a vicinal Pd surface.

    Science.gov (United States)

    Shipilin, Mikhail; Gustafson, Johan; Zhang, Chu; Merte, Lindsay Richard; Lundgren, Edvin

    2016-07-27

    In an attempt to bridge the material and pressure gaps - two major challenges for an atomic scale understanding of heterogeneous catalysis - we employed high-energy surface X-ray diffraction as a tool to study the Pd(553) surface in situ under changing reaction conditions during CO oxidation. The diffraction patterns recorded under CO rich reaction conditions are characteristic for the metallic state of the surface. In an environment with low excess of O2 over the reaction stoichiometry, the surface seems to accommodate oxygen atoms along the steps forming one or several subsequent adsorbate structures and rapidly transforms into a combination of (332), (111) and (331) facets likely providing the room for the formation of a surface oxide. For the case of large excess of O2, the diffraction data show the presence of a multilayer PdO with the [101] crystallographic direction parallel to the [111] and the [331] directions of the substrate. The reconstructions in O2 excess are to a large extent similar to those previously reported for pure O2 exposures by Westerström et al. [R. Westerström et al., Phys. Rev. B: Condens. Matter Mater. Phys., 2007, 76, 155410]. PMID:26805438

  9. Dynamic Sumoylation of a Conserved Transcription Corepressor Prevents Persistent Inclusion Formation during Hyperosmotic Stress

    Science.gov (United States)

    Oeser, Michelle L.; Amen, Triana; Nadel, Cory M.; Bradley, Amanda I.; Reed, Benjamin J.; Jones, Ramon D.; Gopalan, Janani; Kaganovich, Daniel; Gardner, Richard G.

    2016-01-01

    Cells are often exposed to physical or chemical stresses that can damage the structures of essential biomolecules. Stress-induced cellular damage can become deleterious if not managed appropriately. Rapid and adaptive responses to stresses are therefore crucial for cell survival. In eukaryotic cells, different stresses trigger post-translational modification of proteins with the small ubiquitin-like modifier SUMO. However, the specific regulatory roles of sumoylation in each stress response are not well understood. Here, we examined the sumoylation events that occur in budding yeast after exposure to hyperosmotic stress. We discovered by proteomic and biochemical analyses that hyperosmotic stress incurs the rapid and transient sumoylation of Cyc8 and Tup1, which together form a conserved transcription corepressor complex that regulates hundreds of genes. Gene expression and cell biological analyses revealed that sumoylation of each protein directs distinct outcomes. In particular, we discovered that Cyc8 sumoylation prevents the persistence of hyperosmotic stress-induced Cyc8-Tup1 inclusions, which involves a glutamine-rich prion domain in Cyc8. We propose that sumoylation protects against persistent inclusion formation during hyperosmotic stress, allowing optimal transcriptional function of the Cyc8-Tup1 complex. PMID:26800527

  10. Cyst Formation, Development of Alexandrium tamarense from Yangtse River Estuary and Its Relation to Bloom Dynamics

    Institute of Scientific and Technical Information of China (English)

    GUHai-Feng; LANDong-Zhao; FANGQi; WANGZong-Ling

    2004-01-01

    The toxic dinoflagellate—Alexandrium tamarense (Lebour) Balech, formed resting cysts in f/2 media with low nitrate concentrations. Among the concentrations tested, f/20 NO3- was the most effective to induction with an encystment percentage of 2.0 in batch culture. About 73.2% and 17.6% of cysts were produced on 8 and 9 d after transferring. Newly formed cysts developed accumulation body 3d later and kept forming mucilaginous substance, which might help their dispersal and survival. The mandatory dormancy period of resting cysts was 15 and 10d when stored at 15 and 20℃ respectively. The cysts could germinate without temperature change, with germination of 75.6% 20d after formation at 20℃. The Alexandrium cyst density in the surface sediment of DG-26 station reached above 25 cysts/g in May and November of 2002, and dropped to 4.5 and 0.9 cysts/g in August of 2002 and February of 2003, suggesting that Alexandrium cysts might have germinated in spring and autumn 2002. Cysts produced during the bloom returned to water column soon, whatever the season and water temperature were. The cyst density in the surface sediment at DG-26 station in May, 2003 was only 3.3 cysts/g and the cysts were newly formed. In the Yangtse River estuary, the inoculum size was not a major factor to determine the outbreak of A.tamarense bloom.

  11. Simulating Marine New Particle Formation and Growth Using the M7 Modal Aerosol Dynamics Modal

    Directory of Open Access Journals (Sweden)

    Ciaran Monahan

    2010-01-01

    Full Text Available A modal atmospheric aerosol model (M7 is evaluated in terms of predicting marine new particle formation and growth. Simulations were carried out for three different nucleation schemes involving (1 kinetic self-nucleation of OIO (2 nucleation via OIO activation by H2SO4 and (3 nucleation via OIO activation by H2SO4 plus condensation of a low-volatility organic vapour. Peak OIO and H2SO4 vapour concentrations were both limited to 6×106 molecules cm-3 at noontime while the peak organic vapour concentration was limited to 12×106 molecules cm-3. All simulations produced significant concentrations of new particles in the Aitken mode. From a base case particle concentration of 222 cm-3 at radii >15 nm, increases in concentrations to 366 cm-3 were predicted from the OIO-OIO case, 722 cm-3 for the OIO-H2SO4 case, and 1584 cm-3 for the OIO-H2SO4 case with additional condensing organic vapours. The results indicate that open ocean new particle production is feasible for clean conditions; however, new particle production becomes most significant when an additional condensable organic vapour is available to grow the newly formed particles to larger sizes. Comparison to sectional model for a typical case study demonstrated good agreement and the validity of using the modal model.

  12. Rotational Dynamics and Star Formation in the Nearby Dwarf Galaxy NGC 5238

    CERN Document Server

    Cannon, John M; Teich, Yaron G; Ball, Catherine; Banovetz, John; Brock, Annika; Eisner, Brian A; Fitzgibbon, Kathleen; Miazzo, Masao; Nizami, Asra; Reilly, Bridget; Ruvolo, Elizabeth; Singer, Quinton

    2016-01-01

    We present new HI spectral line images of the nearby low-mass galaxy NGC 5238, acquired with the Karl G. Jansky Very Large Array (VLA). Located at a distance of 4.51+/-0.04 Mpc, NGC 5238 is an actively star-forming galaxy with widespread H-alpha and UV continuum emission. The source is included in many ongoing and recent nearby galaxy surveys, but until this work the spatially resolved qualities of its neutral interstellar medium have remained unstudied. Our HI images resolve the disk on physical scales of ~400 pc, allowing us to undertake a detailed comparative study of the gaseous and stellar components. The HI disk is asymmetric in the outer regions, and the areas of high HI mass surface density display a crescent-shaped morphology that is slightly offset from the center of the stellar populations. The HI column density exceeds 10^21 cm^-2 in much of the disk. We quantify the degree of co-spatiality of dense HI gas and sites of ongoing star formation as traced by far-UV and H-alpha emission. The neutral ga...

  13. Dynamic Crystallization Experiments Using Conventional and Solar Furnace Techniques--implications For The Formation of Refractory Forsterite In Chondrites

    Science.gov (United States)

    Pack, A.; Sauerborn, M.; Klerner, S.; Palme, H.; Neumann, A.; Seboldt, W.

    A distinct generation of forsteritic olivine (Mg2SiO4) grains (RF) with unusually high concentrations of refractory components including CaO (0.7 wt.%), Al2O3 (0.4 wt.%), V, Sc, and REEs occurs in unequilibrated chondrites, including ordinary, carbonaceous, and the highly oxidized Rumurutiites. Contents of siderophile elements like FeO (1 wt.%), Ni, or Mn are extremly low in RF. It is inferred that formation of RF pre-dates the formation of chondrules and matrix as well as formation of the different types of parent bodies (CCs, OCs, oxidized R-chondrites). Hence, RF can help us to better understand the processes in the early stage of the solar system in the time between formation of CAIs and Si,Mg-chondrules. However, formation of RF is not well understood. Crystallization of RF in chon- drules requires chondrule melts with ca. 20 wt.% CaO. Most chondrules have typically <4 wt.% CaO (max. ca. 10 wt.% CaO). We have conducted dynamic crystallization experiments using a conventional furnace (1.5...1000 K·min-1) and the DLR solar furnace (approx. 100000 K·min-1) in order to test if rapid cooling of a chondrule- like melt would produce high CaO in RF. We demostrate that Ca-partitioning between olivine and silicate melt is only weakly influenced by rapid cooling even at extremly high cooling rates in the range of 105 K·min-1 as obtained in the solar furnace ex- periments. At a bulk composition of the starting melt of 7.5 wt.% CaO, no deviation from equilibrium fractionation was observed (T/t = 1.5 . . . 105 K·min-1). At a ol/melt bulk content of 17.5 wt.% CaO, in increase in DCa of approximately 10...20% was observed. Chondrules with CaO contents in the range of 10 wt.% (upper limit of CaO in chondrules) thus cannot be regarded to be the host of RF. Hence, there must have been an early generation of extremly CaO-rich chondrules (20 wt.% CaO). Alternatively, RF may have formed by other processes, e. g. direct condensation from the solar nebula.

  14. Electroless formation of silver nanoaggregates: An experimental and molecular dynamics approach

    KAUST Repository

    Gentile, Francesco T.

    2014-02-20

    The ability to manipulate matter to create non-conventional structures is one of the key issues of material science. The understanding of assembling mechanism at the nanoscale allows us to engineer new nanomaterials, with physical properties intimately depending on their structure.This paper describes new strategies to obtain and characterise metal nanostructures via the combination of a top-down method, such as electron beam lithography, and a bottom-up technique, such as the chemical electroless deposition. We realised silver nanoparticle aggregates within well-defined patterned holes created by electron beam lithography on silicon substrates. The quality characteristics of the nanoaggregates were verified by using scanning electron microscopy and atomic force microscopy imaging. Moreover, we compared the experimental findings to molecular dynamics simulations of nanoparticles growth. We observed a very high dependence of the structure characteristics on the pattern nanowell aspect ratio. We found that high-quality metal nanostructures may be obtained in patterns with well aspect ratio close to one, corresponding to a maximum diameter of 50 nm, a limit above which the fabricated structures become less regular and discontinuous. When regular shapes and sizes are necessary, as in nanophotonics, these results suggest the pattern characteristics to obtain isolated, uniform and reproducible metal nanospheres. © 2014 Taylor & Francis.

  15. Multicolor Photometry of the Merging Galaxy Cluster A2319: Dynamics and Star Formation Properties

    CERN Document Server

    Yan, Peng-Fei; Zhang, Li; Zhou, Xu

    2015-01-01

    Asymmetric X-ray emission and powerful cluster-scale radio halo indicate that A2319 is a merging cluster of galaxies. This paper presents our multicolor photometry for A2319 with 15 optical intermediate filters in the Beijing-Arizona-Taiwan-Connecticut (BATC) system. There are 142 galaxies with known spectroscopic redshifts within the viewing field, including 128 member galaxies (called sample I).A large velocity dispersion in the rest frame suggests a merger dynamics in A2319. The contour map of projected density and localized velocity structure confirm the so-called A2319B substructure, at ~ 10' NW to the main concentration A2319A. The spectral energy distributions (SEDs) of more than 30,000 sources are obtained in our BATC photometry down to V ~ 20 mag. With color-color diagrams and photometric redshift technique, 233 galaxies brighter than h=19.0 are newly selected as member candidates. The early-type galaxies are found to follow a tight color-magnitude correlation. Based on sample I and the enlarged samp...

  16. The dynamical state of brightest cluster galaxies and the formation of clusters

    CERN Document Server

    Coziol, R; Caretta, C A; Alamo-Martinez, K A; Tago, E

    2009-01-01

    A large sample of Abell clusters of galaxies, selected for the likely presence of a dominant galaxy, is used to study the dynamical properties of brightest cluster members (BCMs). From visual inspection of Digitized Sky Survey images combined with redshift data we identify 1426 candidate BCMs in 1221 redshift components in 1169 different Abell clusters, the largest such sample published so far. By our own morphological classification we find ~92% of these BCMs to be early-type galaxies, and 48% of cD type. We confirm previous findings based on much smaller samples, namely that a large fraction of BCMs have significant peculiar velocities. For a subsample of 452 clusters with at least 10 measured radial velocities, we find a median BCM peculiar velocity of 32% of their host clusters' radial velocity dispersion. This suggests that most BCMs are not at rest in the potential well of their clusters, and that the phenomenon is thus not a special trait of clusters hosting cD galaxies. We show that the peculiar veloc...

  17. Line Profiles of Cores within Clusters: II Signatures of Dynamical Collapse during High Mass Star Formation

    CERN Document Server

    Smith, Rowan J; Beuther, Henrik; Klessen, Ralf S; Bonnell, Ian A

    2013-01-01

    Observations of atomic or molecular lines can provide important information about the physical state of star forming regions. In order to investigate the line profiles from dynamical collapsing massive star forming regions (MSFRs), we model the emission from hydrodynamic simulations of a collapsing cloud in the absence of outflows. By performing radiative transfer calculations, we compute the optically thick HCO+ and optically thin N2H+ line profiles from two collapsing regions at different epochs. Due to large-scale collapse, the MSFRs have large velocity gradients, reaching up to 20 km/s/pc across the central core. The optically thin lines typically contain multiple velocity components resulting from the superposition of numerous density peaks along the line-of-sight. The optically thick lines are only marginally shifted to the blue side of the optically thin line profiles, and frequently do not have a central depression in their profiles due to self-absorption. As the regions evolve the lines become bright...

  18. Secular dynamics of multiplanet systems: implications for the formation of hot and warm Jupiters via high-eccentricity migration

    CERN Document Server

    Hamers, Adrian S; Lithwick, Yoram; Perets, Hagai B; Zwart, Simon F Portegies

    2016-01-01

    Hot Jupiters (HJs) are Jupiter-like planets that reside very closely to their host star, within $\\sim 0.1\\,\\mathrm{AU}$. Their formation is not well understood. It is generally believed that they cannot have formed in situ, implying that some form of migration must have occurred after their initial formation. We study the production of HJs through secular evolution in multiplanet systems with three to five planets. In this variant of high-$e$ migration, the eccentricity of the orbit of the innermost planet is excited on secular time-scales, triggering orbital migration due to tidal dissipation. We use a secular dynamics code and carry out a population synthesis study. We find that HJs are only produced if the viscous time-scale is short ($\\approx 0.014$ yr). In contrast, in up to $\\approx 0.3$ of systems, the innermost planet is tidally disrupted. The orbital period distribution is peaked around 5 d, consistent with observations. The median HJ mass is $1\\,M_\\mathrm{J}$ with a maximum of $\\approx 2 \\, M_\\mathr...

  19. Secular dynamics of multiplanet systems: implications for the formation of hot and warm Jupiters via high-eccentricity migration

    Science.gov (United States)

    Hamers, Adrian S.; Antonini, Fabio; Lithwick, Yoram; Perets, Hagai B.; Portegies Zwart, Simon F.

    2016-09-01

    Hot Jupiters (HJs) are Jupiter-like planets that reside very closely to their host star, within ˜0.1 AU. Their formation is not well understood. It is generally believed that they cannot have formed in situ, implying that some form of migration must have occurred after their initial formation. We study the production of HJs through secular evolution in multiplanet systems with three to five planets. In this variant of high-e migration, the eccentricity of the orbit of the innermost planet is excited on secular time-scales, triggering orbital migration due to tidal dissipation. We use a secular dynamics code and carry out a population synthesis study. We find that HJs are only produced if the viscous time-scale is short (≈0.014 yr). In contrast, in up to ≈0.3 of systems, the innermost planet is tidally disrupted. The orbital period distribution is peaked around 5 d, consistent with observations. The median HJ mass is 1 MJ with a maximum of ≈2 MJ, similar to observed HJs. Approximately 0.1 of the HJs have retrograde orbits with respect to the stellar spin. We do not find a significant population of warm Jupiters in our simulations, i.e. planets with semimajor axes between 0.1 and 1 AU.

  20. Water ordering controls the dynamic equilibrium of micelle-fibre formation in self-assembly of peptide amphiphiles

    Science.gov (United States)

    Deshmukh, Sanket A.; Solomon, Lee A.; Kamath, Ganesh; Fry, H. Christopher; Sankaranarayanan, Subramanian K. R. S.

    2016-08-01

    Understanding the role of water in governing the kinetics of the self-assembly processes of amphiphilic peptides remains elusive. Here, we use a multistage atomistic-coarse-grained approach, complemented by circular dichroism/infrared spectroscopy and dynamic light scattering experiments to highlight the dual nature of water in driving the self-assembly of peptide amphiphiles (PAs). We show computationally that water cage formation and breakage near the hydrophobic groups control the fusion dynamics and aggregation of PAs in the micellar stage. Simulations also suggest that enhanced structural ordering of vicinal water near the hydrophilic amino acids shifts the equilibrium towards the fibre phase and stimulates structure and order during the PA assembly into nanofibres. Experiments validate our simulation findings; the measured infrared O-H bond stretching frequency is reminiscent of an ice-like bond which suggests that the solvated water becomes increasingly ordered with time in the assembled peptide network, thus shedding light on the role of water in a self-assembly process.

  1. Bubble dynamics in metal nanoparticle formation by laser ablation in liquid studied through high-speed laser stroboscopic videography

    Energy Technology Data Exchange (ETDEWEB)

    Tanabe, Rie; Nguyen, Thao T.P.; Sugiura, Takahiro; Ito, Yoshiro, E-mail: itoy@vos.nagaokaut.ac.jp

    2015-10-01

    Highlights: • Observations at 1 μs interval were carried out for laser ablation in water. • Laser-induced shock wave and cavitation bubble are dynamically observed. • Jet-like shadows are observed during LAL in water after multiple-pulse irradiation. • Cloudlike-shadow moving away from the irradiated copper surface was observed. - Abstract: Laser ablation in liquid (LAL) is utilized in many applications, such as the fabrication of nanoparticles, laser cleaning and laser peening. We have developed a high-speed laser stroboscopic videography system that enables observations at intervals of 1 μs. Using this imaging system, we investigated the dynamics of cavitation bubbles induced by LAL to elucidate the timing and location of nanoparticle formation and dispersion into the surrounding liquid. The initial bubble demonstrated a well-defined, smooth boundary during its growth and shrinkage. Although previous studies have reported the ejection of particles at the boundary of the bubble, this was not observed in our images. Intermixing between the gas phase of the bubble and the surrounding liquid occurred when the first bubble collapsed. Jet-like shadows were recorded during LAL in water after multiple-pulse irradiation, but were not observed in freshly filled water that had not yet been irradiated. These shadows disappeared within 10 μs and are postulated to be micro-bubbles induced by interactions between nanoparticles suspended in the water and the incoming laser beam.

  2. EFFECTS OF DYNAMICAL EVOLUTION OF GIANT PLANETS ON THE DELIVERY OF ATMOPHILE ELEMENTS DURING TERRESTRIAL PLANET FORMATION

    Energy Technology Data Exchange (ETDEWEB)

    Matsumura, Soko [School of Engineering, Physics, and Mathematics, University of Dundee, DD1 4HN, Scotland (United Kingdom); Brasser, Ramon; Ida, Shigeru, E-mail: s.matsumura@dundee.ac.uk [Earth-Life Science Institute, Tokyo Institute of Technology, Meguro-ku, Tokyo, 152-8550 (Japan)

    2016-02-10

    Recent observations started revealing the compositions of protostellar disks and planets beyond the solar system. In this paper, we explore how the compositions of terrestrial planets are affected by the dynamical evolution of giant planets. We estimate the initial compositions of the building blocks of these rocky planets by using a simple condensation model, and numerically study the compositions of planets formed in a few different formation models of the solar system. We find that the abundances of refractory and moderately volatile elements are nearly independent of formation models, and that all the models could reproduce the abundances of these elements of the Earth. The abundances of atmophile elements, on the other hand, depend on the scattering rate of icy planetesimals into the inner disk, as well as the mixing rate of the inner planetesimal disk. For the classical formation model, neither of these mechanisms are efficient and the accretion of atmophile elements during the final assembly of terrestrial planets appears to be difficult. For the Grand Tack model, both of these mechanisms are efficient, which leads to a relatively uniform accretion of atmophile elements in the inner disk. It is also possible to have a “hybrid” scenario where the mixing is not very efficient but the scattering is efficient. The abundances of atmophile elements in this case increase with orbital radii. Such a scenario may occur in some of the extrasolar planetary systems, which are not accompanied by giant planets or those without strong perturbations from giants. We also confirm that the Grand Tack scenario leads to the distribution of asteroid analogues where rocky planetesimals tend to exist interior to icy ones, and show that their overall compositions are consistent with S-type and C-type chondrites, respectively.

  3. A Study on the Dynamic Mechanism of the Formation of Mesoscale Vortex in Col Field

    Institute of Scientific and Technical Information of China (English)

    JIANG Yongqiang; WANG Yuan; HUANG Hong

    2012-01-01

    The mesoscale vortex associated with a mesoscale low-level jet (mLLJ) usually causes heavy rainfall in the col field.The col field is defined as a region between two highs and two lows,with the isobaric surface similar to a col.Using a two-dimensional shallow water model,the meso-β scale vortex couplets (MβVCs)induced by eight types of mesoscale wind perturbations in an ideal col field were numerically simulated.With the sizes of ~100 km,the MβVCs induced by northerly perturbation (NP) and southerly perturbation (SP)moved toward the col point.The sizes of MβVCs induced by southwesterly perturbation (SWP),southeasterly perturbation (SEP),northwesterly perturbation (NWP),and northeasterly perturbation (NEP) were relatively small for the perturbations moving toward dilatation axis.The MβVC induced by easterly perturbation (EP) and westerly perturbation (WP) could not develop because they quickly moved away from the col point,before the circulation could form.The size of the circulation was determined by the distance between the vortex and the col point.The closer to the col point the vortex was,the larger the size of vortex.The comparisons of maximum vorticity and vorticity root mean square error (RMSE) of the NP,the SWP,and the WP show that the maximum vorticity and the vorticity RMSE of the NP decreased slower than other perturbations.Therefore,the weak environment of the col field favors the maintenance of vorticity and the formation of vortex.When a mesoscalc vortex forms near the col point or moves toward the col point,it may maintain a quasi-stationary state in the stable col field.

  4. Formation and Dynamics of Waves in a Cortical Model of Cholinergic Modulation.

    Directory of Open Access Journals (Sweden)

    James P Roach

    2015-08-01

    Full Text Available Acetylcholine (ACh is a regulator of neural excitability and one of the neurochemical substrates of sleep. Amongst the cellular effects induced by cholinergic modulation are a reduction in spike-frequency adaptation (SFA and a shift in the phase response curve (PRC. We demonstrate in a biophysical model how changes in neural excitability and network structure interact to create three distinct functional regimes: localized asynchronous, traveling asynchronous, and traveling synchronous. Our results qualitatively match those observed experimentally. Cortical activity during slow wave sleep (SWS differs from that during REM sleep or waking states. During SWS there are traveling patterns of activity in the cortex; in other states stationary patterns occur. Our model is a network composed of Hodgkin-Huxley type neurons with a M-current regulated by ACh. Regulation of ACh level can account for dynamical changes between functional regimes. Reduction of the magnitude of this current recreates the reduction in SFA the shift from a type 2 to a type 1 PRC observed in the presence of ACh. When SFA is minimal (in waking or REM sleep state, high ACh patterns of activity are localized and easily pinned by network inhomogeneities. When SFA is present (decreasing ACh, traveling waves of activity naturally arise. A further decrease in ACh leads to a high degree of synchrony within traveling waves. We also show that the level of ACh determines how sensitive network activity is to synaptic heterogeneity. These regimes may have a profound functional significance as stationary patterns may play a role in the proper encoding of external input as memory and traveling waves could lead to synaptic regularization, giving unique insights into the role and significance of ACh in determining patterns of cortical activity and functional differences arising from the patterns.

  5. The ATHENA antihydrogen experiment

    CERN Multimedia

    Laurent Guiraud

    2000-01-01

    On the left, the superconducting magnet containing the antiproton and recombination traps. In the foreground are two scintillators for the detection of particles emerging from antiproton annihilations

  6. REDSHIFT 6.4 HOST GALAXIES OF 108 SOLAR MASS BLACK HOLES: LOW STAR FORMATION RATE AND DYNAMICAL MASS

    International Nuclear Information System (INIS)

    We present Atacama Large Millimeter Array observations of rest-frame far-infrared continuum and [C II] line emission in two z = 6.4 quasars with black hole masses of ≈108 M☉. CFHQS J0210–0456 is detected in the continuum with a 1.2 mm flux of 120 ± 35 μJy, whereas CFHQS J2329–0301 is undetected at a similar noise level. J2329–0301 has a star formation rate limit of ☉ yr–1, considerably below the typical value at all redshifts for this bolometric luminosity. Through comparison with hydro simulations, we speculate that this quasar is observed at a relatively rare phase where quasar feedback has effectively shut down star formation in the host galaxy. [C II] emission is also detected only in J0210–0456. The ratio of [C II] to far-infrared luminosity is similar to that of low-redshift galaxies of comparable luminosity, suggesting that the previous finding of an offset in the relationships between this ratio and far-infrared luminosity at low and high redshifts may be partially due to a selection effect due to the limited sensitivity of previous continuum data. The [C II] line of J0210–0456 is relatively narrow (FWHM = 189 ± 18 km s–1), indicating a dynamical mass substantially lower than expected from the local black hole-velocity dispersion correlation. The [C II] line is marginally resolved at 0.''7 resolution with the blue and red wings spatially offset by 0.''5 (3 kpc) and a smooth velocity gradient of 100 km s–1 across a scale of 6 kpc, possibly due to the rotation of a galaxy-wide disk. These observations are consistent with the idea that stellar mass growth lags black hole accretion for quasars at this epoch with respect to more recent times.

  7. Interlinked nonlinear subnetworks underlie the formation of robust cellular patterns in Arabidopsis epidermis: a dynamic spatial model

    Directory of Open Access Journals (Sweden)

    Padilla-Longoria Pablo

    2008-11-01

    Full Text Available Abstract Background Dynamical models are instrumental for exploring the way information required to generate robust developmental patterns arises from complex interactions among genetic and non-genetic factors. We address this fundamental issue of developmental biology studying the leaf and root epidermis of Arabidopsis. We propose an experimentally-grounded model of gene regulatory networks (GRNs that are coupled by protein diffusion and comprise a meta-GRN implemented on cellularised domains. Results Steady states of the meta-GRN model correspond to gene expression profiles typical of hair and non-hair epidermal cells. The simulations also render spatial patterns that match the cellular arrangements observed in root and leaf epidermis. As in actual plants, such patterns are robust in the face of diverse perturbations. We validated the model by checking that it also reproduced the patterns of reported mutants. The meta-GRN model shows that interlinked sub-networks contribute redundantly to the formation of robust hair patterns and permits to advance novel and testable predictions regarding the effect of cell shape, signalling pathways and additional gene interactions affecting spatial cell-patterning. Conclusion The spatial meta-GRN model integrates available experimental data and contributes to further understanding of the Arabidopsis epidermal system. It also provides a systems biology framework to explore the interplay among sub-networks of a GRN, cell-to-cell communication, cell shape and domain traits, which could help understanding of general aspects of patterning processes. For instance, our model suggests that the information needed for cell fate determination emerges from dynamic processes that depend upon molecular components inside and outside differentiating cells, suggesting that the classical distinction of lineage versus positional cell differentiation may be instrumental but rather artificial. It also suggests that interlinkage

  8. The growth of disks and bulges during hierarchical galaxy formation. II: metallicity, stellar populations and dynamical evolution

    CERN Document Server

    Tonini, Chiara; Wyithe, J Stuart B; Croton, Darren J

    2016-01-01

    We investigate the properties of the stellar populations of model galaxies, using the new semi-analytic model presented in Tonini et al. (2016a). This new model follows the angular momentum evolution of gas and stars, providing the base for a new star formation recipe, and treatment of the effects of mergers that depends on the central galaxy dynamical structure. We find that the new recipes have the effect of boosting the efficiency of the baryonic cycle in producing and recycling metals, as well as preventing minor mergers from diluting the metallicity of bulges and ellipticals. The model reproduces the stellar mass - stellar metallicity relation for galaxies above 1e10 solar masses, including Brightest Cluster Galaxies. Model disks, galaxies dominated by instability-driven components, and merger-driven objects each stem from different evolutionary channels. These model galaxies therefore occupy different loci in the galaxy mass - size relation, which we find to be in accord with the Atlas 3D classification...

  9. Exploration of fluid dynamic indicators/causative factors in the formation of tower structures in staphylococci bacteria bio-films

    Science.gov (United States)

    Sherman, Erica; Derek, Moormeier; Bayles, Kenneth; Wei, Timothy

    2015-11-01

    Staphylococcus aureus bacteria form biofilms with distinct structures that facilitate their ability to tolerate treatment and to spread within the body. As such, staph infections represent one of the greatest threats to post-surgery patients. It has been found that flow conditions play a significant role in the developmental and dispersal activity of a biofilm. The coupling between the growing biofilm and surrounding flow, however, is not well understood. Indeed, little is know why bacteria form tower structures under certain conditions but not in a predictable way. μ-PTV measurements were made in a microchannel to try to identify fluid dynamic indicators for the formation of towers in biofilm growth. Preliminary experiments indicated changes in the near wall flow up to five hours before a tower formed. The reason for that is the target of this investigation. Staphylococcus aureus bacteria were cultured in the Bioflux Fluxion channel and subjected to a steady shear rate of 0.5 dynes. In addition to μ-PTV measurement, nuclease production and cell number density counts were observed prior to and during tower development. These were compared against measurements made under the same nominal flow conditions where a tower did not form.

  10. Bond formation and slow heterogeneous dynamics in adhesive spheres with long-ranged repulsion: quantitative test of mode coupling theory.

    Science.gov (United States)

    Henrich, O; Puertas, A M; Sperl, M; Baschnagel, J; Fuchs, M

    2007-09-01

    A colloidal system of spheres interacting with both a deep and narrow attractive potential and a shallow long-ranged barrier exhibits a prepeak in the static structure factor. This peak can be related to an additional mesoscopic length scale of clusters and/or voids in the system. Simulation studies of this system have revealed that it vitrifies upon increasing the attraction into a gel-like solid at intermediate densities. The dynamics at the mesoscopic length scale corresponding to the prepeak represents the slowest mode in the system. Using mode coupling theory with all input directly taken from simulations, we reveal the mechanism for glassy arrest in the system at 40% packing fraction. The effects of the low-q peak and of polydispersity are considered in detail. We demonstrate that the local formation of physical bonds is the process whose slowing down causes arrest. It remains largely unaffected by the large-scale heterogeneities, and sets the clock for the slow cluster mode. Results from mode-coupling theory without adjustable parameters agree semiquantitatively with the local density correlators but overestimate the lifetime of the mesoscopic structure (voids). PMID:17930244

  11. Formation of H̅ in p̅-Ps collisions embedded in plasmas

    Science.gov (United States)

    Ratnavelu, Kuru; Ghoshal, Arijit; Nayek, Sujay; Bhattacharya, Arka; Kamali, Mohd Zahurin Mohamed

    2016-04-01

    Screening effects of plasmas on the formation of antihydrogen (H̅) in an arbitrary s-state from the ground state of the positronium atom (Ps) by antiproton (p̅) impact have been studied within the framework of charge-conjugation and time-reversal invariance. Two types of plasma environments have been considered, namely weakly coupled plasma and dense quantum plasma. For weakly coupled plasma, the interactions among the charged particles in plasma have been represented by Debye-Huckel screening model, whereas for dense quantum plasma, interactions among the charged particles in plasma have been represented by exponential cosine-screened Coulomb potentials. Effects of plasma screening on the antihydrogen formation cross section have been studied in the energy range 15-400 keV of incident antiproton. For the free atomic case, our results agree well with some of the most accurate results available in the literature. Contribution to the Topical Issue "Advances in Positron and Electron Scattering", edited by Paulo Limao-Vieira, Gustavo Garcia, E. Krishnakumar, James Sullivan, Hajime Tanuma and Zoran Petrovic.

  12. Bulge Formation

    CERN Document Server

    Combes, F

    1999-01-01

    The currently discussed theories of bulge formation are reviewed, including the primordial scenario, where bulges form rapidly and then accrete disks, the secular scenario, where bulges are formed by dynamical evolution of disks through bars and galaxy interactions, and some combinations of both, where formation of bulges and disks are more continuous and interleaved. The various scenarios make specific predictions about the relative masses, angular momenta, colours, metallicities of bulges relative to disks, and the bulge-to-disk ratio as a function of time. Dynamical processes relevant to the formation of bulges (bar instabilities, mergers) are described and tested against observed statistics. Current data suggest a dynamical feedback from gravitational instabilities in bulge and disk formation. It is very difficult to discriminate between the various scenarios from surveys at z=0 only, and observations at high redshift are presently the best hope for large progress.

  13. Dynamic changes in neurexins' alternative splicing: role of Rho-associated protein kinases and relevance to memory formation.

    Directory of Open Access Journals (Sweden)

    Gabriela Rozic

    Full Text Available The three neurexins genes (NRXN1/2/3 encode polymorphic synaptic membrane proteins that are involved in cognitive functioning. Neurexins' selectivity of function is presumably conferred through differential use of 2 promoters and 5 alternative splicing sites (SS#1/2/3/4/5. In day-old rat brain neurons grown in culture, activation (depolarization induces reversible, calcium dependent, repression of NRXN2α SS#3 insert. The effects of depolarization on NRXN1/2/3α splicing and biochemical pathways mediating them were further studied in these neurons. NRXN1/2/3α splicing in the course of memory formation in vivo was also explored, using fear conditioning paradigm in rats in which the animals were trained to associate an aversive stimulus (electrical shock with a neutral context (a tone, resulting in the expression of fear responses to the neutral context.In the cultured neurons depolarization induced, beside NRXN2α SS#3, repression of SS#3 and SS#4 exons in NRXN3α but not NRXN1α. The repressions were mediated by the calcium/protein kinase C/Rho-associated protein kinase (ROCK pathway. Fear conditioning induced significant and transient repressions of the NRXN1/2/3α SS#4 exons in the rat hippocampus. ROCK inhibition prior to training attenuated the behavioral fear response, the NRXN1/2/3α splicing repressions and subsequent recovery and the levels of excitatory (PSD95 and inhibitory (gephyrin synaptic proteins in the hippocampus. No such effects were observed in the prefrontal cortex. Significant correlations existed between the fear response and hippocampal NRXN3α and NRXN2α SS#4 inserts as well as PSD95 protein levels. Hippocampal NRXN1α SS#4 insert and gephyrin levels did not correlate with the behavioral response but were negatively correlated with each other.These results show for the first time dynamic, experience related changes in NRXN1/2/3α alternative splicing in the rat brain and a role for ROCK in them. Specific neurexins

  14. Centrifugal separation and equilibration dynamics in an electron-antiproton plasma

    CERN Document Server

    Andresen, G B; Baquero-Ruiz, Marcelo; Bertsche, William; Bowe, Paul D; Butler, Eoin; Cesar, Claudio L; Chapman, Steven; Charlton, Michael; Deller, A; Eriksson, S; Fajans, Joel; Friesen, Tim; Fujiwara, Makoto C; Gill, David R; Gutierrez, A; Hangst, Jeffrey S; Hardy, Walter N; Hayden, Michael E; Humphries, Andrew J; Hydomako, Richard; Jonsell, Svante; Madsen, Niels; Menary, Scott; Nolan, Paul; Olin, Art; Povilus, Alexander; Pusa, Petteri; Robicheaux, Francis; Sarid, Eli; Silveira, Daniel M; So, Chukman; Storey, James W; Thompson, Robert I; van der Werf, Dirk P; Wurtele, Jonathan S; Yamazaki, Yasunori

    2011-01-01

    Charges in cold, multiple-species, non-neutral plasmas separate radially by mass, forming centrifugally-separated states. Here, we report the first detailed measurements of such states in an electron-antiproton plasma, and the first observations of the separation dynamics in any centrifugally-separated system. While the observed equilibrium states are expected and in agreement with theory, the equilibration time is approximately constant over a wide range of parameters, a surprising and as yet unexplained result. Electron-antiproton plasmas play a crucial role in antihydrogen trapping experiments.

  15. ALMA OBSERVATIONS OF A HIGH-DENSITY CORE IN TAURUS: DYNAMICAL GAS INTERACTION AT THE POSSIBLE SITE OF A MULTIPLE STAR FORMATION

    International Nuclear Information System (INIS)

    Starless dense cores eventually collapse dynamically, forming protostars inside them, and the physical properties of the cores determine the nature of the forming protostars. We report ALMA observations of dust continuum emission and molecular rotational lines toward MC27 or L1521F, which is considered to be very close to the first protostellar core phase. We found a few starless high-density cores, one of which has a very high density of ∼107 cm–3, within a region of several hundred AU around a very low-luminosity protostar detected by Spitzer. A very compact bipolar outflow with a dynamical timescale of a few hundred years was found toward the protostar. The molecular line observation shows several cores with an arc-like structure, possibly due to the dynamical gas interaction. These complex structures revealed in the present observations suggest that the initial condition of star formation is highly dynamical in nature, which is considered to be a key factor in understanding fundamental issues of star formation such as the formation of multiple stars and the origin of the initial mass function of stars

  16. Formation, characterization, and flow dynamics of nanostructure modified sensitive and selective gas sensors based on porous silicon

    Science.gov (United States)

    Ozdemir, Serdar

    Nanopore covered microporous silicon interfaces have been formed via an electrochemical etch for gas sensor applications. Rapid reversible and sensitive gas sensors have been fabricated. Both top-down and bottom-up approaches are utilized in the process. A nano-pore coated micro-porous silicon surface is modified selectively for sub-ppm detection of NH3, PH3 , NO, H2S, SO2. The selective depositions include electrolessly generated SnO2, CuxO, Au xO, NiO, and nanoparticles such as TiO2, MgO doped TiO 2, Al2O3, and ZrO2. Flow dynamics are analyzed via numerical simulations and response data. An array of sensors is formed to analyze mixed gas response. A general coating selection method for chemical sensors is established via an extrapolation on the inverse of the Hard-Soft Acid-Base concept. In Chapter 1, the current state of the porous silicon gas sensor research is reviewed. Since metal oxide thin films, and, recently, nanowires are dominantly used for sensing application, the general properties of metal oxides are also discussed in this chapter. This chapter is concluded with a discussion about commercial gas sensors and the advantages of using porous silicon as a sensing material. The PS review discussed at the beginning of this chapter is an overview of the following publication: (1) "The Potential of Porous Silicon Gas Sensors", Serdar Ozdemir, James L. Gole, Current Opinion in Solid State and Materials Science, 11, 92-100 (2007). In Chapter 2, porous silicon formation is explained in detail. Interesting results of various silicon anodization experiments are discussed. In the second part of this chapter, the microfabrication process of porous silicon conductometric gas sensors and gas testing set up are briefly introduced. In chapter 3, metal oxide nanoparticle/nanocluster formation and characterization experiments via SEM and XPS analysis are discussed. Chapter 4 is an overview of the test results for various concentrations NH3, NO, NO2 and PH3. The

  17. Experimental constraints on the energy budget of dynamic gouge formation: effects of rock strength, material heterogeneity, and initial flaw characteristics

    Science.gov (United States)

    Griffith, Ashley; Barber, Troy; Borjas, Christopher; Ghaffari, Hamed

    2016-04-01

    Fault core materials are characterized by substantial grain size reduction relative to host and damage zone rocks. The properties of these materials control fault strength and frictional behavior, and they record valuable information about rupture and slip processes. At high strain rates and large stress amplitudes characteristic of earthquake rupture tips, rock failure passes through a fragmentation transition from discrete fracture to pulverization; therefore much of the observed grain size reduction at the leading edge of propagating earthquake ruptures. Past examinations of particle size distributions in gouge formed in the cores of natural faults have led to contrasting conclusions that during a single event, the energy associated with creation of new surface area during this grain size reduction can be as large as 50%, or as little as particle size measurement and (B) uncertainty regarding the variety of (not-necessarily coseismic) physico-chemical processes that may contribute to the observed grain size reduction. Here we study the micromechanics and energy budget of dynamic rock fragmentation under impulsive compressive loads using a Split Hopkinson Pressure Bar. We present new experimental results on Arkansas Novaculite and Westerly Granite coupled with microstructural observations and BET surface area measurements of post-mortem specimens. We show that the energy partitioned into creation of new surface areas approaches a significant portion of the total dissipated energy during our experiments, but this partitioning can be buffered by the presence of flaws and/or significant material heterogeneity. The results of this work have important implications for lithologic controls on gouge formation and energy partitioning during earthquakes.

  18. Investigating and Modeling the Thermo-dynamic Impact of Electrolyte Solutions of Sodium Chloride and Sodium Sulfate on Prevention of the Formation of Methane Hydrate

    Directory of Open Access Journals (Sweden)

    M. Manteghian

    2013-07-01

    Full Text Available Devising methods to prevent hydrate formation is of the important issues in natural gas industry. Since a great deal of money is annually spent on using hydrate inhibitors, identification of new inhibitors with higher degrees of efficacy is economically justifiable. Bearing in mind the significant role of hydrate inhibitors in prevention of natural gas pipelines’ getting blocked, the present study attempts to investigate two compounds of NaCl and Na2SO4 as inhibitors of hydrate methane’s formation so as to respond to “what is the inhibitive thermo-dynamic impact of electrolyte compounds of NaCl and Na2SO4 on the formation of methane hydrate?” To do so, this study not only measures the equilibrium temperature and pressure of methane hydrate formation in the presence of electrolyte solutions of NaCl and Na2SO4 and compares the results obtained with the state lacking such inhibitors, but it also assesses the regression and mathematical modeling are utilized within a basic virtual environment in order to propose a model for prediction of thermo-dynamic equilibrium temperature and pressure of methane hydrate formation.

  19. The coupling between stability and ion pair formation in magnesium electrolytes from first-principles quantum mechanics and classical molecular dynamics

    Energy Technology Data Exchange (ETDEWEB)

    Rajput, Nav Nidhi; Qu, Xiaohuui; Sa, Niya; Burrell, Anthony K.; Persson, Kristin A.

    2015-03-11

    In this work we uncover a novel effect between concentration dependent ion pair formation and anion stability at reducing potentials, e.g., at the metal anode. Through comprehensive calculations using both first-principles as well as well-benchmarked classical molecular dynamics over a matrix of electrolytes, covering solvents and salt anions with a broad range in chemistry, we elucidate systematic correlations between molecular level interactions and composite electrolyte properties, such as electrochemical stability, solvation structure, and dynamics. We find that Mg electrolytes are highly prone to ion pair formation, even at modest concentrations, for a wide range of solvents with different dielectric constants, which have implications for dynamics as well as charge transfer. Specifically, we observe that, at Mg metal potentials, the ion pair undergoes partial reduction at the Mg cation center (Mg2+ -> Mg+), which competes with the charge transfer mechanism and can activate the anion to render it susceptible to decomposition. Specifically, TFSI exhibits a significant bond weakening while paired with the transient, partially reduced Mg+. In contrast, BH4 and BF4 are shown to be chemically stable in a reduced ion pair configuration. Furthermore, we observe that higher order glymes as well as DMSO improve the solubility of Mg salts, but only the longer glyme chains reduce the dynamics of the ions in solution. This information provides critical design metrics for future electrolytes as it elucidates a close connection between bulk solvation and cathodic stability as well as the dynamics of the salt.

  20. Modelling non-equilibrium secondary organic aerosol formation and evaporation with the aerosol dynamics, gas- and particle-phase chemistry kinetic multilayer model ADCHAM

    Energy Technology Data Exchange (ETDEWEB)

    Roldin, P.; Eriksson, A. C.; Nordin, E. Z.; Hermansson, E.; Mogensen, Ditte; Rusanen, A.; Boy, Michael; Swietlicki, E.; Svenningsson, Birgitta; Zelenyuk, Alla; Pagels, J.

    2014-08-11

    We have developed the novel Aerosol Dynamics, gas- and particle- phase chemistry model for laboratory CHAMber studies (ADCHAM). The model combines the detailed gas phase Master Chemical Mechanism version 3.2, an aerosol dynamics and particle phase chemistry module (which considers acid catalysed oligomerization, heterogeneous oxidation reactions in the particle phase and non-ideal interactions between organic compounds, water and inorganic ions) and a kinetic multilayer module for diffusion limited transport of compounds between the gas phase, particle surface and particle bulk phase. In this article we describe and use ADCHAM to study: 1) the mass transfer limited uptake of ammonia (NH3) and formation of organic salts between ammonium (NH4+) and carboxylic acids (RCOOH), 2) the slow and almost particle size independent evaporation of α-pinene secondary organic aerosol (SOA) particles, and 3) the influence of chamber wall effects on the observed SOA formation in smog chambers.

  1. Preferential formation of 13C- 18O bonds in carbonate minerals, estimated using first-principles lattice dynamics

    Science.gov (United States)

    Schauble, Edwin A.; Ghosh, Prosenjit; Eiler, John M.

    2006-05-01

    Equilibrium constants for internal isotopic exchange reactions of the type: Ca12C18O16O2+Ca13C16O3↔Ca13C18O16O2+Ca12C16O3 for individual CO 32- groups in the carbonate minerals calcite (CaCO 3), aragonite (CaCO 3), dolomite (CaMg(CO 3) 2), magnesite (MgCO 3), witherite (BaCO 3), and nahcolite (NaHCO 3) are calculated using first-principles lattice dynamics. Calculations rely on density functional perturbation theory (DFPT) with norm-conserving planewave pseudopotentials to determine the vibrational frequencies of isotopically substituted crystals. Our results predict an ˜0.4‰ excess of 13C18O16O22- groups in all studied carbonate minerals at room-temperature equilibrium, relative to what would be expected in a stochastic mixture of carbonate isotopologues with the same bulk 13C/ 12C, 18O/ 16O, and 17O/ 16O ratios. The amount of excess 13C18O16O22- decreases with increasing temperature of equilibration, from 0.5‰ at 0 °C to <0.1‰ at 300 °C, suggesting that measurements of multiply substituted isotopologues of carbonate could be used to infer temperatures of ancient carbonate mineral precipitation and alteration events, even where the δ 18O of coexisting fluids is uncertain. The predicted temperature sensitivity of the equilibrium constant is ˜0.003‰/°C at 25 °C. Estimated equilibrium constants for the formation of 13C18O16O22- are remarkably uniform for the variety of minerals studied, suggesting that temperature calibrations will also be applicable to carbonate minerals not studied here without greatly compromising accuracy. A related equilibrium constant for the reaction: Ca12C18O16O2+Ca12C17O16O2↔Ca12C18O17O16O+Ca12C16O3 in calcite indicates formation of 0.1‰ excess 12C 18O 17O 16O 2- at 25 °C. In a conventional phosphoric acid reaction of carbonate to form CO 2 for mass-spectrometric analysis, molecules derived from 13C18O16O22- dominate (˜96%) the mass 47 signal, and 12C 18O 17O 16O 2- contributes most of the remainder (3%). This suggests

  2. Massively parallel molecular dynamics simulation of formation of ice-crystallite precursors in supercooled water: incipient-nucleation behavior and role of system size.

    Science.gov (United States)

    English, Niall J; Tse, John S

    2015-09-01

    Ice-crystallite precursor formation in supercooled water was studied via molecular dynamics for systems ranging from ∼10^{6} to 8.6×10^{6} molecules, using a tetrahedrally biased single-site "mW" model. This has established system-size effects in the early onset of nucleation, so as to study often-transient precursors' beguiling propensity to "flicker" into instantaneous locally ordered molecular arrangements redolent of ice. In addition, the adoption of solidlike and liquidlike bimodal local configurational-energy distributions was observed, characteristic of early nucleation. Larger systems favored a higher probability of precursor formation, although such ones were not usually longer lived relative to those in smaller systems (which themselves are rather transient). It was concluded tentatively that subtle effects of differences in systemwide density fluctuations and accessible lower-frequency modes tend to favor precursor formation in larger systems, although not necessarily the precursor's kinetic stability. PMID:26465451

  3. Mechanical Model of Geometric Cell and Topological Algorithm for Cell Dynamics from Single-Cell to Formation of Monolayered Tissues with Pattern

    KAUST Repository

    Kachalo, Sëma

    2015-05-14

    Geometric and mechanical properties of individual cells and interactions among neighboring cells are the basis of formation of tissue patterns. Understanding the complex interplay of cells is essential for gaining insight into embryogenesis, tissue development, and other emerging behavior. Here we describe a cell model and an efficient geometric algorithm for studying the dynamic process of tissue formation in 2D (e.g. epithelial tissues). Our approach improves upon previous methods by incorporating properties of individual cells as well as detailed description of the dynamic growth process, with all topological changes accounted for. Cell size, shape, and division plane orientation are modeled realistically. In addition, cell birth, cell growth, cell shrinkage, cell death, cell division, cell collision, and cell rearrangements are now fully accounted for. Different models of cell-cell interactions, such as lateral inhibition during the process of growth, can be studied in detail. Cellular pattern formation for monolayered tissues from arbitrary initial conditions, including that of a single cell, can also be studied in detail. Computational efficiency is achieved through the employment of a special data structure that ensures access to neighboring cells in constant time, without additional space requirement. We have successfully generated tissues consisting of more than 20,000 cells starting from 2 cells within 1 hour. We show that our model can be used to study embryogenesis, tissue fusion, and cell apoptosis. We give detailed study of the classical developmental process of bristle formation on the epidermis of D. melanogaster and the fundamental problem of homeostatic size control in epithelial tissues. Simulation results reveal significant roles of solubility of secreted factors in both the bristle formation and the homeostatic control of tissue size. Our method can be used to study broad problems in monolayered tissue formation. Our software is publicly

  4. Intragastric formation and modulation of N-nitrosodimethylamine in a dynamic in vitro gastrointestinal model under human physiological conditions

    NARCIS (Netherlands)

    Krul, C.A.M.; Zeilmaker, M.J.; Schothorst, R.C.; Havenaar, R.

    2004-01-01

    Human exposure to carcinogenic N-alkylnitrosamines can occur exogenously via food consumption or endogenously by formation of these compounds through nitrosation of amine precursors. Information on the intragastric formation of NDMA from complex mixtures of precursors and inhibitors in humans is not

  5. A model for landscape development in terms of shoreline displacement, sediment dynamics, lake formation, and lake choke-up processes

    Energy Technology Data Exchange (ETDEWEB)

    Brydsten, Lars [Umeaa University, Dept. of Ecology and Environmental Science (Sweden)

    2006-12-15

    This project expands on the study 'A mathematical model for lake ontogeny in terms of filling with sediments and macrophyte vegetation' published in SKB TR-04-09. As the title suggests, this older model focuses on lakes (existing and future lakes). This newer study extends the model to examine progress of terrestrial objects such as mires or arable land. Furthermore, this newer model could simulate progress of the areas close to the objects. These areas are divided according to their watershed boundaries. If two or more objects are situated along the same brook, the lower situated area is defined as its catchments minus the catchments of the closest higher situated object. The model encourages the study of an object situated in the sea from the time of deglaciation (c. 10,000 BP) to the time for the object due to positive shore displacement is situated on land or that a lake object has progressed to a wetland, however not longer than 18,000 AP. The model focuses on the object and its location in 100-year steps. The model is written in VisualBasic and is divided into two modules, a marine module and a lake module. The marine module deals with shoreline displacement, erosion and accumulation of postglacial fine-grained sediments and erosion of glacial clay. Inputs to the marine module are a digital elevation model (DEM), a digital map showing the extension of the objects and a marine quaternary map. The two maps are in raster formats with exactly the same formats (extension and cell sizes) as the DEM. For each time step the water depths at each pixel are calculated using a shore displacement equation. Next, the water depth changes due to sediment dynamics are calculated using the following rules; accumulation of fine-grained sediments are allowed if the pixel is situated within a future lake object; erosion of fine-grained sediment is allowed if the pixel is not within a future lake object and the marine quaternary map shows occurrence of postglacial

  6. IMPACT OF QUARKS AND PIONS ON DYNAMICS AND NEUTRINO SIGNAL OF BLACK HOLE FORMATION IN NON-ROTATING STELLAR CORE COLLAPSE

    International Nuclear Information System (INIS)

    In the formation process of black holes, the density and temperature of matter become sufficiently high for quarks and pions to appear. In this study, we numerically investigate stellar core collapse and black hole formation taking into account the equations of state involving quarks and/or pions. In our simulations, we utilize a code that solves the general relativistic hydrodynamics and neutrino transfer equations simultaneously, treating neutrino reactions in detail under spherical symmetry. Initial models with three different masses, namely, 40, 100, and 375 Msun, are adopted. Our results show that quarks and pions shorten the duration of neutrino emission if the collapse bounces before black hole formation. In addition, pions increase the luminosity and average energy of neutrinos before black hole formation. We also find that the hadron-quark phase transition leads to an interesting evolution of temperature. Moreover, the neutrino event number is evaluated for the currently operating neutrino detector, SuperKamiokande, to confirm that it is not only detectable but also affected by the emergence of quarks and pions for Galactic events. While there are some issues, such as hyperons, beyond the scope of this study, this is the first serious attempt to assess the impact of quarks and pions in dynamical simulations of black hole formation and will serve as an important foundation for future studies.

  7. Dynamics

    CERN Document Server

    Goodman, Lawrence E

    2001-01-01

    Beginning text presents complete theoretical treatment of mechanical model systems and deals with technological applications. Topics include introduction to calculus of vectors, particle motion, dynamics of particle systems and plane rigid bodies, technical applications in plane motions, theory of mechanical vibrations, and more. Exercises and answers appear in each chapter.

  8. Eberhard Widmann (Stefan Meyer Institute, Vienna) and Silke Federmann (Ph.D. Student from Vienna in the CERN-Austrian Ph.D. program) together with a microwave cavity developed by Silke at CERN. The cavity will be used for the first time to look for spin-flip transitions of antihydrogen atoms later this year.

    CERN Multimedia

    Maximilien Brice

    2011-01-01

    Eberhard Widmann (Stefan Meyer Institute, Vienna) and Silke Federmann (Ph.D. Student from Vienna in the CERN-Austrian Ph.D. program) together with a microwave cavity developed by Silke at CERN. The cavity will be used for the first time to look for spin-flip transitions of antihydrogen atoms later this year.

  9. A dynamic flow simulation code benchmark study addressing the highly heterogeneous properties of the Stuttgart formation at the Ketzin pilot site

    Science.gov (United States)

    Kempka, Thomas; Class, Holger; Görke, Uwe-Jens; Norden, Ben; Kolditz, Olaf; Kühn, Michael; Walter, Lena; Wang, Wenqing; Zehner, Björn

    2013-04-01

    CO2 injection at the Ketzin pilot site located in Eastern Germany (Brandenburg) about 25 km west of Berlin is undertaken since June 2008 with a scheduled total amount of about 70,000 t CO2 to be injected into the saline aquifer represented by the Stuttgart Formation at a depth of 630 m to 650 m until the end of August 2013. The Stuttgart Formation is of fluvial origin determined by high-permeablity sandstone channels embedded in a floodplain facies of low permeability indicating a highly heterogeneous distribution of reservoir properties as facies distribution, porosity and permeability relevant for dynamic flow simulations. Following the dynamic modelling activities discussed by Kempka et al. (2010), a revised geological model allowed us to history match CO2 arrival times in the observation wells and reservoir pressure with a good agreement (Martens et al., 2012). Consequently, the validated reservoir model of the Stuttgart Formation at the Ketzin pilot site enabled us to predict the development of reservoir pressure and the CO2 plume migration in the storage formation by dynamic flow simulations. A benchmark study of industrial (ECLIPSE 100 as well as ECLIPSE 300 CO2STORE and GASWAT) and scientific dynamic flow simulations codes (TOUGH2-MP/ECO2N, OpenGeoSys and DuMuX) was initiated to address and compare the simulator capabilities considering a highly complex reservoir model. Hence, our dynamic flow simulations take into account different properties of the geological model such as significant variation of porosity and permeability in the Stuttgart Formation as well as structural geological features implemented in the geological model such as seven major faults located at the top of the Ketzin anticline. Integration of the geological model into reservoir models suitable for the different dynamic flow simulators applied demonstrated that a direct conversion of reservoir model discretization between Finite Volume and Finite Element flow simulators is not feasible

  10. Resonance enhanced multiphoton ionization time-of-flight (REMPI-TOF) study of phosphorous oxychloride (POCl3) dissociation at 235 nm: Dynamics of Cl(2Pj) formation

    International Nuclear Information System (INIS)

    Highlights: ► First results on dynamics of Cl atom formation in the photodissociation of POCl3. ► Two types of Cl atom formation mechanism. ► Cl2 formation from the ground state supported by ab initio calculation. -- Abstract: In one-color REMPI-TOF experiment, the photodissociation dynamics of POCl3 has been studied by photolyzing POCl3 and probing the chlorine atom photofragments, namely, Cl(2P3/2) and Cl∗(2P1/2) using 2 + 1 REMPI scheme, in the 234–236 nm region. We have determined the centre-of-mass photofragment speed distribution, recoil anisotropy parameter, and the spin–orbit branching ratio for chlorine atom elimination channels. The anisotropy parameters for Cl and Cl∗ are the same, and characterized by a value of 0.0 ± 0.05. Two components, namely, the fast and the slow, are observed in the translational energy distributions of Cl and Cl∗. The average translational energies for the Cl and Cl∗ channels for the fast components are 12.5 ± 1.5 and 16.8 ± 1.5 kcal/mol, while, for the slow components, the average translational energies are 1.5 ± 1.0 and 2.5 ± 1.0 kcal/mol, respectively. Apart from the chlorine atom elimination channel, Cl2 elimination is also observed in the photodissociation of POCl3.

  11. EF-Tu dynamics during pre-translocation complex formation: EF-Tu·GDP exits the ribosome via two different pathways.

    Science.gov (United States)

    Liu, Wei; Chen, Chunlai; Kavaliauskas, Darius; Knudsen, Charlotte R; Goldman, Yale E; Cooperman, Barry S

    2015-10-30

    The G-protein EF-Tu, which undergoes a major conformational change when EF-Tu·GTP is converted to EF-Tu·GDP, forms part of an aminoacyl(aa)-tRNA·EF-Tu·GTP ternary complex (TC) that accelerates the binding of aa-tRNA to the ribosome during peptide elongation. Such binding, placing a portion of EF-Tu in contact with the GTPase Associated Center (GAC), is followed by GTP hydrolysis and Pi release, and results in formation of a pretranslocation (PRE) complex. Although tRNA movement through the ribosome during PRE complex formation has been extensively studied, comparatively little is known about the dynamics of EF-Tu interaction with either the ribosome or aa-tRNA. Here we examine these dynamics, utilizing ensemble and single molecule assays employing fluorescent labeled derivatives of EF-Tu, tRNA, and the ribosome to measure changes in either FRET efficiency or fluorescence intensity during PRE complex formation. Our results indicate that ribosome-bound EF-Tu separates from the GAC prior to its full separation from aa-tRNA, and suggest that EF-Tu·GDP dissociates from the ribosome by two different pathways. These pathways correspond to either reversible EF-Tu·GDP dissociation from the ribosome prior to the major conformational change in EF-Tu that follows GTP hydrolysis, or irreversible dissociation after or concomitant with this conformational change.

  12. Modelling non-equilibrium secondary organic aerosol formation and evaporation with the aerosol dynamics, gas- and particle-phase chemistry kinetic multi-layer model ADCHAM

    Directory of Open Access Journals (Sweden)

    P. Roldin

    2014-01-01

    Full Text Available We have developed the novel Aerosol Dynamics, gas- and particle-phase chemistry model for laboratory CHAMber studies (ADCHAM. The model combines the detailed gas phase Master Chemical Mechanism version 3.2, an aerosol dynamics and particle phase chemistry module (which considers acid catalysed oligomerization, heterogeneous oxidation reactions in the particle phase and non-ideal interactions between organic compounds, water and inorganic ions and a kinetic multilayer module for diffusion limited transport of compounds between the gas phase, particle surface and particle bulk phase. In this article we describe and use ADCHAM to study: (1 the mass transfer limited uptake of ammonia (NH3 and formation of organic salts between ammonium (NH4+ and carboxylic acids (RCOOH, (2 the slow and almost particle size independent evaporation of α-pinene secondary organic aerosol (SOA particles, and (3 the influence of chamber wall effects on the observed SOA formation in smog chambers. ADCHAM is able to capture the observed α-pinene SOA mass increase in the presence of NH3(g. Organic salts of ammonium and carboxylic acids predominantly form during the early stage of SOA formation. These salts contribute substantially to the initial growth of the homogeneously nucleated particles. The model simulations of evaporating α-pinene SOA particles support the recent experimental findings that these particles have a semi-solid tar like amorphous phase state. ADCHAM is able to reproduce the main features of the observed slow evaporation rates if low-volatility and viscous oligomerized SOA material accumulates in the particle surface layer upon evaporation. The evaporation rate is mainly governed by the reversible decomposition of oligomers back to monomers. Finally, we demonstrate that the mass transfer limited uptake of condensable organic compounds onto wall deposited particles or directly onto the Teflon chamber walls of smog chambers can have profound influence on

  13. Dynamic mineral clouds on HD 189733b I. 3D RHD with kinetic, non-equilibrium cloud formation

    CERN Document Server

    Lee, G; Helling, Ch; Bognar, K; Woitke, P

    2016-01-01

    3D modelling of cloud formation in atmospheres of extrasolar planets coupled to the atmospheric radiative, hydrodynamic and thermo-chemical properties has long been an open challenge. We present a 3D radiative-hydrodynamic (RHD) atmosphere model of HD 189733b fully coupled to a kinetic, microphysical mineral cloud formation model. We include the feedback effects of cloud advection and settling, gas phase element advection and depletion/replenishment and include the radiative effects of cloud and gas opacity. The 3D Navier-Stokes equations are solved consistently with a two-stream radiative transfer scheme coupled with the cloud moment conservation equations. We model the cloud particles as a mix of mineral materials which change in size and composition as they travel through atmospheric thermo-chemical environments. The local cloud properties such as number density, grain size and material composition are time-dependently calculated. Gas phase element depletion as a result of cloud formation are calculated an...

  14. Molecular dynamics simulation of the formation, growth and bursting of bubbles in tungsten exposed to high fluxes of low energy deuterium

    Energy Technology Data Exchange (ETDEWEB)

    Liu, Shengguang, E-mail: sgliu@dlut.edu.cn [Key Laboratory of Materials Modification by Laser, Ion and Electron Beams (Ministry of Education), School of Physics and Optoelectronic Technology, Dalian University of Technology, Dalian 116024 (China); Dai, Shuyu; Sang, Chaofeng [Key Laboratory of Materials Modification by Laser, Ion and Electron Beams (Ministry of Education), School of Physics and Optoelectronic Technology, Dalian University of Technology, Dalian 116024 (China); Sun, Jizhong, E-mail: jsun@dlut.edu.cn [Key Laboratory of Materials Modification by Laser, Ion and Electron Beams (Ministry of Education), School of Physics and Optoelectronic Technology, Dalian University of Technology, Dalian 116024 (China); Stirner, Thomas [University of Applied Sciences Deggendorf, Edlmairstr. 6+8, D-94469 Deggendorf (Germany); Wang, Dezhen [Key Laboratory of Materials Modification by Laser, Ion and Electron Beams (Ministry of Education), School of Physics and Optoelectronic Technology, Dalian University of Technology, Dalian 116024 (China)

    2015-08-15

    Molecular dynamics simulations are carried out to investigate the formation, growth and bursting of bubbles in tungsten exposed to the irradiation of an extremely high deuterium flux. It is found that the bubbles form in the region near the location of the implanted ion distribution peaks, and that the effect of the substrate temperature on the bubble formation depth is negligible; it is also found that the percentage of deuterium that is found in D{sub 2} molecules increases as the bubble grows, and that the evolution of the bubble’s internal pressure is strongly associated with the properties of its surrounding structure. The simulations display the development of a dome-shaped structure at the tungsten surface during the bubble growth. The merging of two deuterium bubbles is also observed. The present simulations also show that the bubble bursts by generating a partially opened lid, which has already been observed in previous independent experiments.

  15. Molecular dynamics simulation of the formation, growth and bursting of bubbles in tungsten exposed to high fluxes of low energy deuterium

    International Nuclear Information System (INIS)

    Molecular dynamics simulations are carried out to investigate the formation, growth and bursting of bubbles in tungsten exposed to the irradiation of an extremely high deuterium flux. It is found that the bubbles form in the region near the location of the implanted ion distribution peaks, and that the effect of the substrate temperature on the bubble formation depth is negligible; it is also found that the percentage of deuterium that is found in D2 molecules increases as the bubble grows, and that the evolution of the bubble’s internal pressure is strongly associated with the properties of its surrounding structure. The simulations display the development of a dome-shaped structure at the tungsten surface during the bubble growth. The merging of two deuterium bubbles is also observed. The present simulations also show that the bubble bursts by generating a partially opened lid, which has already been observed in previous independent experiments

  16. Molecular dynamics simulation of the formation, growth and bursting of bubbles in tungsten exposed to high fluxes of low energy deuterium

    Science.gov (United States)

    Liu, Shengguang; Dai, Shuyu; Sang, Chaofeng; Sun, Jizhong; Stirner, Thomas; Wang, Dezhen

    2015-08-01

    Molecular dynamics simulations are carried out to investigate the formation, growth and bursting of bubbles in tungsten exposed to the irradiation of an extremely high deuterium flux. It is found that the bubbles form in the region near the location of the implanted ion distribution peaks, and that the effect of the substrate temperature on the bubble formation depth is negligible; it is also found that the percentage of deuterium that is found in D2 molecules increases as the bubble grows, and that the evolution of the bubble's internal pressure is strongly associated with the properties of its surrounding structure. The simulations display the development of a dome-shaped structure at the tungsten surface during the bubble growth. The merging of two deuterium bubbles is also observed. The present simulations also show that the bubble bursts by generating a partially opened lid, which has already been observed in previous independent experiments.

  17. Kiloparsec-Scale Simulations of Star Formation in Disk Galaxies II. Structure and Dynamics of Filaments and Clumps in Giant Molecular Clouds

    CERN Document Server

    Butler, Michael J; Van Loo, Sven

    2014-01-01

    We present hydrodynamic simulations of self-gravitating dense gas in a galactic disk, exploring scales ranging from 1 kpc down to $\\sim 0.1$~pc. Our primary goal is to understand how dense filaments form in Giant Molecular Clouds (GMCs). These structures, often observed as Infrared Dark Clouds (IRDCs) in the Galactic plane, are thought to be the precursors to massive stars and star clusters, so their formation may be the rate limiting step controlling global star formation rates in galactic systems as described by the Kennicutt-Schmidt relation. Our study follows on from Van Loo et al. (2013, Paper I), which carried out simulations to 0.5~pc resolution and examined global aspects of the formation of dense gas clumps and the resulting star formation rate. Here, using our higher resolution, we examine the detailed structural, kinematic and dynamical properties of dense filaments and clumps, including mass surface density ($\\Sigma$) probability distribution functions, filament mass per unit length and its disper...

  18. Rock-salt structure lithium deuteride formation in liquid lithium with high-concentrations of deuterium: a first-principles molecular dynamics study

    Science.gov (United States)

    Chen, Mohan; Abrams, T.; Jaworski, M. A.; Carter, Emily A.

    2016-01-01

    Because of lithium’s possible use as a first wall material in a fusion reactor, a fundamental understanding of the interactions between liquid lithium (Li) and deuterium (D) is important. We predict structural and dynamical properties of liquid Li samples with high concentrations of D, as derived from first-principles molecular dynamics simulations. Liquid Li samples with four concentrations of inserted D atoms (LiDβ , β =0.25 , 0.50, 0.75, and 1.00) are studied at temperatures ranging from 470 to 1143 K. Densities, diffusivities, pair distribution functions, bond angle distribution functions, geometries, and charge transfer between Li and D atoms are calculated and analyzed. The analysis suggests liquid-solid phase transitions can occur at some concentrations and temperatures, forming rock-salt LiD within liquid Li. We also observe formation of some D2 molecules at high D concentrations.

  19. Role of two-photon electronic transitions in the formation of active dynamic conductivity in a three-barrier resonance tunneling structure with an applied Dc electric field

    International Nuclear Information System (INIS)

    The theory of active dynamic conductivity in a three-barrier resonance tunneling structure subjected to the combined action of a weak electromagnetic field and a longitudinal dc electric field is developed with regard for the contribution of laser induced one- and two-photon electronic transitions with different frequencies. For this purpose, the full Schroedinger equation is solved in the effective mass approximation and with the use of the model of rectangular potential wells and barriers for an electron. The maximum contribution of two-photon transitions to the formation of the total active dynamic conductivity in laser-induced transitions is shown not to exceed 38%. Geometric configurations of the resonance tunneling structure, for which the laser radiation intensity increases due to laser induced two-photon electronic transitions, are determined

  20. Spatio-temporal pattern formation, fractals, and chaos in conceptual ecological models as applied to coupled plankton-fish dynamics

    International Nuclear Information System (INIS)

    The current turn-of-the-century period witnesses the intensive use of the bioproducts of the World Ocean while at the same time calling for precautions to preserve its ecological stability. This requires that biophysical processes in aquatic systems be comprehensively explored and new methods for monitoring their dynamics be developed. While aquatic and terrestrial ecosystems have much in common in terms of their mathematical description, there are essential differences between them. For example, the mobility of oceanic plankton is mainly controlled by diffusion processes, whereas terrestrial organisms naturally enough obey totally different laws. This paper is focused on the processes underlying the dynamics of spatially inhomogeneous plankton communities. We demonstrate that conceptual reaction-diffusion mathematical models are an appropriate tool for investigating both complex spatio-temporal plankton dynamics and the fractal properties of planktivorous fish school walks. (reviews of topical problems)

  1. A visualization of threading dislocations formation and dynamics in mosaic growth of GaN-based light emitting diode epitaxial layers on (0001) sapphire

    Science.gov (United States)

    Ravadgar, P.; Horng, R. H.; Ou, S. L.

    2012-12-01

    A clear visualization of the origin and characteristics of threading dislocations (TDs) of GaN-based light emitting diode epitaxial layers on (0001) sapphire substrates have been carried out. Special experimental set up and chemical etchant along with field emission scanning electron microscopy are employed to study the dynamics of GaN TDs at different growth stages. Cross-sectional transmission electron microscopy analysis visualized the formation of edge TDs is arising from extension of coalescences at boundaries of different tilting-twining nucleation grains "mosaic growth." Etch pits as representatives of edge TDs are in agreement with previous theoretical models and analyses of TDs core position and characteristics.

  2. Boost invariant flow, black hole formation, and far-from-equilibrium dynamics in N=4 supersymmetric Yang-Mills theory

    International Nuclear Information System (INIS)

    Using gauge/gravity duality, we study the creation and evolution of boost-invariant anisotropic, strongly-coupled N=4 supersymmetric Yang-Mills plasma. In the dual gravitational description, this corresponds to horizon formation in a geometry driven to be anisotropic by a time-dependent change in boundary conditions.

  3. Formation and removal of apical vapor lock during syringe irrigation: a combined experimental and Computational Fluid Dynamics approach

    NARCIS (Netherlands)

    Boutsioukis, C.; Kastrinakis, E.; Lambrianidis, T.; Verhaagen, B.; Versluis, M.; Sluis, van der L.W.M.

    2014-01-01

    Aim (i) To evaluate the effect of needle type and insertion depth, root canal size and irrigant flow rate on the entrapment of air bubbles in the apical part of a root canal (apical vapor lock) during syringe irrigation using experiments and a Computational Fluid Dynamics (CFD) model, (ii) to invest

  4. Formation and removal of apical vapor lock during syringe irrigation : a combined experimental and Computational Fluid Dynamics approach

    NARCIS (Netherlands)

    Boutsioukis, C.; Kastrinakis, E.; Lambrianidis, T.; Verhaagen, B.; Versluis, M.; van der Sluis, L. W. M.

    2014-01-01

    Aim(i) To evaluate the effect of needle type and insertion depth, root canal size and irrigant flow rate on the entrapment of air bubbles in the apical part of a root canal (apical vapor lock) during syringe irrigation using experiments and a Computational Fluid Dynamics (CFD) model, (ii) to investi

  5. Continuum dynamics of the formation, migration and dissociation of self-locked dislocation structures on parallel slip planes

    Science.gov (United States)

    Zhu, Yichao; Niu, Xiaohua; Xiang, Yang

    2016-11-01

    In continuum models of dislocations, proper formulations of short-range elastic interactions of dislocations are crucial for capturing various types of dislocation patterns formed in crystalline materials. In this article, the continuum dynamics of straight dislocations distributed on two parallel slip planes is modelled through upscaling the underlying discrete dislocation dynamics. Two continuum velocity field quantities are introduced to facilitate the discrete-to-continuum transition. The first one is the local migration velocity of dislocation ensembles which is found fully independent of the short-range dislocation correlations. The second one is the decoupling velocity of dislocation pairs controlled by a threshold stress value, which is proposed to be the effective flow stress for single slip systems. Compared to the almost ubiquitously adopted Taylor relationship, the derived flow stress formula exhibits two features that are more consistent with the underlying discrete dislocation dynamics: (i) the flow stress increases with the in-plane component of the dislocation density only up to a certain value, hence the derived formula admits a minimum inter-dislocation distance within slip planes; (ii) the flow stress smoothly transits to zero when all dislocations become geometrically necessary dislocations. A regime under which inhomogeneities in dislocation density grow is identified, and is further validated through comparison with discrete dislocation dynamical simulation results. Based on the findings in this article and in our previous works, a general strategy for incorporating short-range dislocation correlations into continuum models of dislocations is proposed.

  6. Dynamic model of counter flow air to air heat exchanger for comfort ventilation with condensation and frost formation

    DEFF Research Database (Denmark)

    Nielsen, Toke Rammer; Rose, Jørgen; Kragh, Jesper

    2009-01-01

    must be calculated under conditions with condensation and freezing. This article presents a dynamic model of a counter flow air to air heat exchanger taking into account condensation and freezing and melting of ice. The model is implemented in Simulink and results are compared to measurements...

  7. Dynamics of intraoceanic subduction initiation : 2. Suprasubduction zone ophiolite formation and metamorphic sole exhumation in context of absolute plate motions

    OpenAIRE

    van Hinsbergen, Douwe J. J.; Peters, Kalijn; Maffione, Marco; Spakman, Wim; Guilmette, Carl; Thieulot, Cedric; Plümper, Oliver; Gürer, Derya; Brouwer, Fraukje M.; Aldanmaz, Ercan; Kaymakçi, N.

    2015-01-01

    Analyzing subduction initiation is key for understanding the coupling between plate tectonics and the underlying mantle. Here we focus on suprasubduction zone (SSZ) ophiolites and how their formation links to intraoceanic subduction initiation in an absolute plate motion frame. SSZ ophiolites form the majority of exposed oceanic lithosphere fragments and are widely recognized to have formed during intraoceanic subduction initiation. Structural, petrological, geochemical, and plate kinematic c...

  8. Formation and Dissociation of Methane Hydrates from Seawater in Consolidated Sand: Mimicking Methane Hydrate Dynamics beneath the Seafloor

    Directory of Open Access Journals (Sweden)

    Prasad B. Kerkar

    2013-11-01

    Full Text Available Methane hydrate formation and dissociation kinetics were investigated in seawater-saturated consolidated Ottawa sand-pack under sub-seafloor conditions to study the influence of effective pressure on formation and dissociation kinetics. To simulate a sub-seafloor environment, the pore-pressure was varied relative to confining pressure in successive experiments. Hydrate formation was achieved by methane charging followed by sediment cooling. The formation of hydrates was delayed with increasing degree of consolidation. Hydrate dissociation by step-wise depressurization was instantaneous, emanating preferentially from the interior of the sand-pack. Pressure drops during dissociation and in situ temperature controlled the degree of endothermic cooling within sediments. In a closed system, the post-depressurization dissociation was succeeded by thermally induced dissociation and pressure-temperature conditions followed theoretical methane-seawater equilibrium conditions and exhibited excess pore pressure governed by the pore diameter. These post-depressurization equilibrium values for the methane hydrates in seawater saturated consolidated sand-pack were used to estimate the enthalpy of dissociation of 55.83 ± 1.41 kJ/mol. These values were found to be lower than those reported in earlier literature for bulk hydrates from seawater (58.84 kJ/mol and pure water (62.61 kJ/mol due to excess pore pressure generated within confined sediment system under investigation. However, these observations could be significant in the case of hydrate dissociation in a subseafloor environment where dissociation due to depressurization could result in an instantaneous methane release followed by slow thermally induced dissociation. The excess pore pressure generated during hydrate dissociation could be higher within fine-grained sediments with faults and barriers present in subseafloor settings which could cause shifting in geological layers.

  9. Transcript Accumulation Dynamics of Phenylpropanoid Pathway Genes in the Maturing Xylem and Phloem of Picea abies during Latewood Formation

    Institute of Scientific and Technical Information of China (English)

    Giovanni Emiliani; Maria Laura Traversi; Monica Anichini; Guido Giachi; Aiessio Giovannelli

    2011-01-01

    In temperate regions,latewood is produced when cambial activity declines with the approach of autumnal dormancy.The understanding of the temporal (cambium activity vs dormancy) and spatial (phloem,cambial region,maturing xylem) regulation of key genes involved in the phenylpropanoid pathway during latewood formation represents a crucial step towards providing new insights into the molecular basis of xylogenesis.In this study,the temporal pattern of transcript accumulation of 12 phenylpropanoid genes (PAL1,C4H3I5,C4H4,4CL3,4CL4,HCT1,C3H3,CCoAOMT1,COMT2,COMT5,CCR2) was analyzed in maturing xylem and phloem of Picea abies during latewood formation.Quantitative reverse transcription-polymerase chain reaction analyses revealed a well-defined RNA accumulation pattern of genes involved in the phenylpropanoid pathway during latewood formation.Differences in the RNA accumulation patterns were detected between the different tissue types analyzed.The results obtained here demonstrated that the molecular processes involved in monolignol biosynthesis are not restricted to the cambial activity timeframe but continued after the end of cambium cell proliferation.Furthermore,since it has been shown that lignification of maturing xylem takes place in late autumn,we argue on the basis of our data that phloem could play a key role in the monolignol biosynthesis process.

  10. Bond Formation and Bond Scission Dynamics in Polyatomic Molecules Revealed by Momentum Imaging Experiments and Electron Scattering Calculations

    Science.gov (United States)

    Slaughter, Daniel; Trevisan, Cynthia; Weyland, Marvin; Dorn, Alexander; Douguet, Nicolas; Orel, Ann; Adaniya, Hidehito; McCurdy, Bill; Belkacem, Ali; Rescigno, Tom

    2016-05-01

    We present combined experimental and theoretical studies of dissociative electron attachment (DEA) dynamics in methane and ammonia. DEA in each of these systems proceeds through electronic Feshbach resonances, where a valence electron is excited and captured with the incident electron in the lowest unoccupied orbital. In methane, one triply-degenerate resonance undergoes Jahn-Teller splitting through molecular distortions, leading to four observed final states, each having a 2-body and a 3-body dissociation with anionic products H- and CH2-and neutrals CH3, CH2, H2 or H. In ammonia, one resonance leads to H- + NH2 and NH2-+ H, the latter resulting from non-adiabatic charge transfer. A higher energy resonance leads directly to H- + NH2* and indirectly to NH2-+ H. We examine the dynamics of the transient anion in each of these processes. work supported by Chemical Sciences, Geosciences and Biosciences division of BES/DOE.

  11. Dynamics of ordering in highly degenerate models with anisotropic grain-boundary potential: Effects of temperature and vortex formation

    DEFF Research Database (Denmark)

    Jeppesen, Claus; Flyvbjerg, Henrik; Mouritsen, Ole G.

    1989-01-01

    universality class, and that all models with nonconserved order parameter, independent of ordering degeneracy and softness and origin of domain boundaries, obey the classical growth law at finite temperatures. In quenches to the Potts-ordered phase vortices and antivortices occur and annihilate mutually...... without pinning the ordering process. The ordering dynamics for quenches into the intermediate phase is also found to be described by an effectively algebraic growth law....

  12. Evolution-development congruence in pattern formation dynamics: Bifurcations in gene expression and regulation of networks structures.

    Science.gov (United States)

    Kohsokabe, Takahiro; Kaneko, Kunihiko

    2016-01-01

    Search for possible relationships between phylogeny and ontogeny is important in evolutionary-developmental biology. Here we uncover such relationships by numerical evolution and unveil their origin in terms of dynamical systems theory. By representing developmental dynamics of spatially located cells with gene expression dynamics with cell-to-cell interaction under external morphogen gradient, gene regulation networks are evolved under mutation and selection with the fitness to approach a prescribed spatial pattern of expressed genes. For most numerical evolution experiments, evolution of pattern over generations and development of pattern by an evolved network exhibit remarkable congruence. Both in the evolution and development pattern changes consist of several epochs where stripes are formed in a short time, while for other temporal regimes, pattern hardly changes. In evolution, these quasi-stationary regimes are generations needed to hit relevant mutations, while in development, they are due to some gene expression that varies slowly and controls the pattern change. The morphogenesis is regulated by combinations of feedback or feedforward regulations, where the upstream feedforward network reads the external morphogen gradient, and generates a pattern used as a boundary condition for the later patterns. The ordering from up to downstream is common in evolution and development, while the successive epochal changes in development and evolution are represented as common bifurcations in dynamical-systems theory, which lead to the evolution-development congruence. Mechanism of exceptional violation of the congruence is also unveiled. Our results provide a new look on developmental stages, punctuated equilibrium, developmental bottlenecks, and evolutionary acquisition of novelty in morphogenesis.

  13. Evolution-development congruence in pattern formation dynamics: Bifurcations in gene expression and regulation of networks structures.

    Science.gov (United States)

    Kohsokabe, Takahiro; Kaneko, Kunihiko

    2016-01-01

    Search for possible relationships between phylogeny and ontogeny is important in evolutionary-developmental biology. Here we uncover such relationships by numerical evolution and unveil their origin in terms of dynamical systems theory. By representing developmental dynamics of spatially located cells with gene expression dynamics with cell-to-cell interaction under external morphogen gradient, gene regulation networks are evolved under mutation and selection with the fitness to approach a prescribed spatial pattern of expressed genes. For most numerical evolution experiments, evolution of pattern over generations and development of pattern by an evolved network exhibit remarkable congruence. Both in the evolution and development pattern changes consist of several epochs where stripes are formed in a short time, while for other temporal regimes, pattern hardly changes. In evolution, these quasi-stationary regimes are generations needed to hit relevant mutations, while in development, they are due to some gene expression that varies slowly and controls the pattern change. The morphogenesis is regulated by combinations of feedback or feedforward regulations, where the upstream feedforward network reads the external morphogen gradient, and generates a pattern used as a boundary condition for the later patterns. The ordering from up to downstream is common in evolution and development, while the successive epochal changes in development and evolution are represented as common bifurcations in dynamical-systems theory, which lead to the evolution-development congruence. Mechanism of exceptional violation of the congruence is also unveiled. Our results provide a new look on developmental stages, punctuated equilibrium, developmental bottlenecks, and evolutionary acquisition of novelty in morphogenesis. PMID:26678220

  14. Bond formation and slow heterogeneous dynamics in adhesive spheres with long--ranged repulsion: Quantitative test of Mode Coupling Theory

    OpenAIRE

    Henrich, Oliver; Puertas, Antonio M.; Sperl, Matthias; Baschnagel, Jörg; Fuchs, Matthias

    2007-01-01

    A colloidal system of spheres interacting with both a deep and narrow attractive potential and a shallow long-ranged barrier exhibits a prepeak in the static structure factor. This peak can be related to an additional mesoscopic length scale of clusters and/or voids in the system. Simulation studies of this system have revealed that it vitrifies upon increasing the attraction into a gel-like solid at intermediate densities. The dynamics at the mesoscopic length scale corresponding to the prep...

  15. fSpatial and temporal dynamics of cellulose degradation and biofilm formation by Caldicellulosiruptor obsidiansis and Clostridium thermocellum

    OpenAIRE

    Wang, Zhi-Wu; Lee, Seung-Hwan; Elkins, James G; Morrell-Falvey, Jennifer L.

    2011-01-01

    Cellulose degradation is one of the major bottlenecks of a consolidated bioprocess that employs cellulolytic bacterial cells as catalysts to produce biofuels from cellulosic biomass. In this study, we investigated the spatial and temporal dynamics of cellulose degradation by Caldicellulosiruptfor obsidiansis, which does not produce cellulosomes, and Clostridium thermocellum, which does produce cellulosomes. Results showed that the degradation of either regenerated or natural cellulose was syn...

  16. ON THE DYNAMICAL FORMATION OF VERY YOUNG, X-RAY EMITTING BLACK HOLE BINARIES IN DENSE STAR CLUSTERS

    International Nuclear Information System (INIS)

    We recently discovered a population of very young (τ ∼☉) star clusters, similar to the masses of BHB hosts in NGC 4449, through the first 10 Myr of their lives. Our goal is to determine whether dynamical interactions are responsible for the observed population of BHBs in NGC 4449. Our simulations span a wide range of initial size and density profiles, both with and without primordial mass segregation, testing both realistic initial conditions and extreme ones. We find that clusters without primordial mass segregation only dynamically produce BHBs within 10 Myr when they are extremely compact and centrally concentrated. Preliminary results that include primordial binaries support this conclusion. The introduction of strong primordial mass segregation, however, greatly increases the rapidity with which the binaries form, although these are still not tight enough that they will emit X-rays. We conclude that X-ray emitting BHBs are unlikely to form dynamically in clusters of this mass under realistic conditions. Instead, they probably originate from binaries that contain two massive stars with small orbital separations, which are present from the cluster's birth.

  17. Dynamics of condensate formation in stochastic transport with pair-factorized steady states: Nucleation and coarsening time scales

    Science.gov (United States)

    Nagel, Hannes; Janke, Wolfhard

    2016-05-01

    Driven diffusive systems such as the zero-range process (ZRP) and the pair-factorized steady states (PFSS) stochastic transport process are versatile tools that lend themselves to the study of transport phenomena on a generic level. While their mathematical structure is simple enough to allow significant analytical treatment, they offer a variety of interesting phenomena. With appropriate dynamics, the ZRP and PFSS models feature a condensation transition where, for a supercritical density, the translational symmetry breaks spontaneously and excess particles form a single-site or spatially extended condensate, respectively. In this paper we numerically study the typical time scales of the two stages of this condensation process: Nucleation and coarsening. Nucleation is the first stage of condensation where the bulk system relaxes to its stationary distribution and droplet nuclei form in the system. These droplets then gradually grow or evaporate in the coarsening regime to coalesce in a single condensate when the system finally relaxes to the stationary state. We use the ZRP condensation model to discuss the choice of the estimation method for the nucleation time scale and present scaling exponents for the ZRP and PFSS condensation models with respect to the choice of the typical droplet nuclei mass. We then proceed to present scaling exponents in the coarsening regime of the ZRP for partially asymmetric dynamics and the PFSS model for symmetric and asymmetric dynamics.

  18. Dynamic studies of H-Ras•GTPγS interactions with nucleotide exchange factor Sos reveal a transient ternary complex formation in solution.

    Science.gov (United States)

    Vo, Uybach; Vajpai, Navratna; Embrey, Kevin J; Golovanov, Alexander P

    2016-01-01

    The cycling between GDP- and GTP- bound forms of the Ras protein is partly regulated by the binding of Sos. The structural/dynamic behavior of the complex formed between activated Sos and Ras at the point of the functional cycle where the nucleotide exchange is completed has not been described to date. Here we show that solution NMR spectra of H-Ras∙GTPγS mixed with a functional fragment of Sos (Sos(Cat)) at a 2:1 ratio are consistent with the formation of a rather dynamic assembly. H-Ras∙GTPγS binding was in fast exchange on the NMR timescale and retained a significant degree of molecular tumbling independent of Sos(Cat), while Sos(Cat) also tumbled largely independently of H-Ras. Estimates of apparent molecular weight from both NMR data and SEC-MALS revealed that, at most, only one H-Ras∙GTPγS molecule appears stably bound to Sos. The weak transient interaction between Sos and the second H-Ras∙GTPγS may provide a necessary mechanism for complex dissociation upon the completion of the native GDP → GTP exchange reaction, but also explains measurable GTP → GTP exchange activity of Sos routinely observed in in vitro assays that use fluorescently-labelled analogs of GTP. Overall, the data presents the first dynamic snapshot of Ras functional cycle as controlled by Sos. PMID:27412770

  19. Dynamic studies of H-Ras•GTPγS interactions with nucleotide exchange factor Sos reveal a transient ternary complex formation in solution.

    Science.gov (United States)

    Vo, Uybach; Vajpai, Navratna; Embrey, Kevin J; Golovanov, Alexander P

    2016-07-14

    The cycling between GDP- and GTP- bound forms of the Ras protein is partly regulated by the binding of Sos. The structural/dynamic behavior of the complex formed between activated Sos and Ras at the point of the functional cycle where the nucleotide exchange is completed has not been described to date. Here we show that solution NMR spectra of H-Ras∙GTPγS mixed with a functional fragment of Sos (Sos(Cat)) at a 2:1 ratio are consistent with the formation of a rather dynamic assembly. H-Ras∙GTPγS binding was in fast exchange on the NMR timescale and retained a significant degree of molecular tumbling independent of Sos(Cat), while Sos(Cat) also tumbled largely independently of H-Ras. Estimates of apparent molecular weight from both NMR data and SEC-MALS revealed that, at most, only one H-Ras∙GTPγS molecule appears stably bound to Sos. The weak transient interaction between Sos and the second H-Ras∙GTPγS may provide a necessary mechanism for complex dissociation upon the completion of the native GDP → GTP exchange reaction, but also explains measurable GTP → GTP exchange activity of Sos routinely observed in in vitro assays that use fluorescently-labelled analogs of GTP. Overall, the data presents the first dynamic snapshot of Ras functional cycle as controlled by Sos.

  20. On the formation location of Uranus and Neptune as constrained by dynamical and chemical models of comets

    OpenAIRE

    Kavelaars, JJ; Mousis, Olivier; Petit, Jean-Marc; Weaver, Harold A.

    2011-01-01

    The D/H enrichment observed in Saturn's satellite Enceladus is remarkably similar to the values observed in the nearly-isotropic comets. Given the predicted strong variation of D/H with heliocentric distance in the solar nebula, this observation links the primordial source region of the nearly-isotropic comets with the formation location of Enceladus. That is, comets from the nearly-isotropic class were most likely fed into their current reservoir, the Oort cloud, from a source region near th...

  1. Dynamics of the phase formation process upon the low temperature selenization of Cu/In-multilayer stacks

    Energy Technology Data Exchange (ETDEWEB)

    Oertel, M., E-mail: michael.oertel@uni-jena.de; Ronning, C. [Institute of Solid State Physics, Friedrich-Schiller-University Jena, Max-Wien-Platz 1, 07743 Jena (Germany)

    2015-03-14

    Phase reactions occurring during a low temperature selenization of thin In/Cu-multilayer stacks were investigated by ex-situ x-ray diffraction (XRD) and energy dispersive x-ray spectroscopy (EDS). Therefore, dc-sputtered In/Cu-multilayers onto molybdenum coated soda lime glass were selenized in a high vacuum system at temperatures between 260 and 340 °C with different dwell times and selenium supply. The combination of the results of the phase analysis by XRD and the measurements of the in-depth elemental distribution by EDS allowed a conclusion on the occurring reactions within the layer depth. We found two CuInSe{sub 2} formation processes depending on the applied temperature. Already, at a heater temperature of 260 °C, the CuInSe{sub 2} formation can occur by the reaction of Cu{sub 2−x}Se with In{sub 4}Se{sub 3} and Se. At 340 °C, CuInSe{sub 2} is formed by the reaction of Cu{sub 2−x}Se with InSe and Se. Because both reactions need additional selenium, the selenium supply during the selenization can shift the reaction equilibria either to the metal binaries side or to the CuInSe{sub 2} side. Interestingly, a lower selenium supply shifts the equilibrium to the CuInSe{sub 2} side, because the amount of selenium incorporated into the metallic layer is higher for a lower selenium supply. Most likely, a larger number of grain boundaries are the reason for the stronger selenium incorporation. The results of the phase formation studies were used to design a two stage selenization process to get a defined structure of an indium selenide- and a copper selenide-layer at low temperatures as the origin for a controlled interdiffusion to form the CuInSe{sub 2}-absorber-layer at higher temperatures. The approach delivers a CuInSe{sub 2} absorber which reach total area efficiencies of 11.8% (13.0% active area) in a CuInSe{sub 2}-thin-film solar cell. A finished formation of CuInSe{sub 2} at low temperature was not observed in our experiments but is probably

  2. Evolution‐development congruence in pattern formation dynamics: Bifurcations in gene expression and regulation of networks structures

    Science.gov (United States)

    Kohsokabe, Takahiro

    2016-01-01

    ABSTRACT Search for possible relationships between phylogeny and ontogeny is important in evolutionary‐developmental biology. Here we uncover such relationships by numerical evolution and unveil their origin in terms of dynamical systems theory. By representing developmental dynamics of spatially located cells with gene expression dynamics with cell‐to‐cell interaction under external morphogen gradient, gene regulation networks are evolved under mutation and selection with the fitness to approach a prescribed spatial pattern of expressed genes. For most numerical evolution experiments, evolution of pattern over generations and development of pattern by an evolved network exhibit remarkable congruence. Both in the evolution and development pattern changes consist of several epochs where stripes are formed in a short time, while for other temporal regimes, pattern hardly changes. In evolution, these quasi‐stationary regimes are generations needed to hit relevant mutations, while in development, they are due to some gene expression that varies slowly and controls the pattern change. The morphogenesis is regulated by combinations of feedback or feedforward regulations, where the upstream feedforward network reads the external morphogen gradient, and generates a pattern used as a boundary condition for the later patterns. The ordering from up to downstream is common in evolution and development, while the successive epochal changes in development and evolution are represented as common bifurcations in dynamical‐systems theory, which lead to the evolution‐development congruence. Mechanism of exceptional violation of the congruence is also unveiled. Our results provide a new look on developmental stages, punctuated equilibrium, developmental bottlenecks, and evolutionary acquisition of novelty in morphogenesis. J. Exp. Zool. (Mol. Dev. Evol.) 326B:61–84, 2016. © 2015 The Authors. Journal of Experimental Zoology Part B: Molecular and Developmental Evolution

  3. Dynamics of ordering in highly degenerate models with anisotropic grain-boundary potential: Effects of temperature and vortex formation

    Science.gov (United States)

    Jeppesen, Claus; Flyvbjerg, Henrik; Mouritsen, Ole G.

    1989-11-01

    Monte Carlo computer-simulation techniques are used to elucidate the equilibrium phase behavior as well as the late-stage ordering dynamics of some two-dimensional models with ground-state ordering of a high degeneracy Q. The models are Q-state Potts models with anisotropic grain-boundary potential on triangular lattices-essentially clock models, except that the potential is not a cosine, but a sine function of the angle between neighboring grain orientations. For not too small Q, these models display two thermally driven phase transitions, one which takes the system from a low-temperature Potts-ordered phase to an intermediate phase which lacks conventional long-range order, and another transition which takes the system to the high-temperature disordered phase. The linear nature of the sine potential used makes it a marginal case in the sense that it favors neither hard domain boundaries, like the standard Potts models do, nor a wetting of the boundaries, as the standard clock models do. Thermal fluctuations nevertheless cause wetting to occur for not too small temperatures. Specifically, we have studied models with Q=12 and 48. The models are quenched from infinity to zero as well as finite temperatures within the two low-temperature phases. The order parameter is a nonconserved quantity during these quenches. The nonequilibrium ordering process subsequent to the quench is studied as a function of time by calculating the interfacial energy, ΔE, associated with the entire grain-boundary network. The time evolution of this quantity is shown to obey the growth law, ΔE(t)~t-n, over an extended time range at late times. It is found that the zero-temperature dynamics is characterized by a special exponent value which for the Q=48 model is n~=0.25 in accordance with earlier work. However, for quenches to finite temperatures in the Potts-ordered phase there is a distinct crossover to the classical Lifshitz-Allen-Cahn exponent value, n=(1/2, for both values of Q. This

  4. Dynamics of ordering in highly degenerate models with anisotropic grain-boundary potential: Effects of temperature and vortex formation

    OpenAIRE

    Jeppesen, Claus; Flyvbjerg, Henrik; Ole G. Mouritsen

    1989-01-01

    Monte Carlo computer-simulation techniques are used to elucidate the equilibrium phase behavior as well as the late-stage ordering dynamics of some two-dimensional models with ground-state ordering of a high degeneracy, Q. The models are Q-state Potts models with anisotropic grain-boundary potential on triangular lattices—essentially clock models, except that the potential is not a cosine, but a sine function of the angle between neighboring grain orientations. For not too small Q, these mode...

  5. Model HULIS compounds in nanoaerosol clusters – investigations of surface tension and aggregate formation using molecular dynamics simulations

    Directory of Open Access Journals (Sweden)

    T. Hede

    2011-07-01

    Full Text Available Cloud condensation nuclei act as cores for water vapour condensation, and their composition and chemical properties may enhance or depress the ability for droplet growth. In this study we use molecular dynamics simulations to show that model humic-like substances (HULIS in systems containing 10 000 water molecules mimic experimental data well referring to reduction of surface tension. The model HULIS compounds investigated in this study are cis-pinonic acid (CPA, pinic acid (PAD and pinonaldehyde (PAL. The structural properties examined show the ability for the model HULIS compounds to aggregate inside the nanoaerosol clusters.

  6. Relationship between spatter formation and dynamic molten pool during high-power deep-penetration laser welding

    International Nuclear Information System (INIS)

    The spatter and the molten pool behavior, which were the important phenomena concerned with the welding quality, were observed and studied by using the high-speed camera and the X-ray transmission imaging system during laser welding under different welding parameters. The formation mechanism of spatter and the corresponding relationships between the spatter and molten pool behavior were investigated. The increase of laser power could cause more intense evaporation and lead to more spatter. When the focal position of laser beam was changed, different forms of spatter were generated, as well as the flow trends of molten metal on the front keyhole wall and at the rear molten pool were changed. The results revealed that the behavior of molten pool, which could be affected by the absorbed energy distribution in the keyhole, was the key factor to determine the spatter formation during laser welding. The relatively sound weld seam could be obtained during laser welding with the focal position located inside the metal.

  7. Relationship between spatter formation and dynamic molten pool during high-power deep-penetration laser welding

    Energy Technology Data Exchange (ETDEWEB)

    Li, Shichun, E-mail: li.shi.chun@163.com [State Key Laboratory of Advanced Design and Manufacturing for Vehicle Body, Hunan University, Changsha 410082, Hunan Province (China); Joining and Welding Research Institute (JWRI), Osaka University, 11-1 Mihogaoka, Ibaraki, Osaka 567-0047 (Japan); Chen, Genyu, E-mail: hdgychen@163.com [State Key Laboratory of Advanced Design and Manufacturing for Vehicle Body, Hunan University, Changsha 410082, Hunan Province (China); Katayama, Seiji, E-mail: katayama@jwri.osaka-u.ac.jp [Joining and Welding Research Institute (JWRI), Osaka University, 11-1 Mihogaoka, Ibaraki, Osaka 567-0047 (Japan); Zhang, Yi, E-mail: zy2100_hn@163.com [State Key Laboratory of Advanced Design and Manufacturing for Vehicle Body, Hunan University, Changsha 410082, Hunan Province (China)

    2014-06-01

    The spatter and the molten pool behavior, which were the important phenomena concerned with the welding quality, were observed and studied by using the high-speed camera and the X-ray transmission imaging system during laser welding under different welding parameters. The formation mechanism of spatter and the corresponding relationships between the spatter and molten pool behavior were investigated. The increase of laser power could cause more intense evaporation and lead to more spatter. When the focal position of laser beam was changed, different forms of spatter were generated, as well as the flow trends of molten metal on the front keyhole wall and at the rear molten pool were changed. The results revealed that the behavior of molten pool, which could be affected by the absorbed energy distribution in the keyhole, was the key factor to determine the spatter formation during laser welding. The relatively sound weld seam could be obtained during laser welding with the focal position located inside the metal.

  8. Dynamics of biofilm formation under different nutrient levels and the effect on biofouling of a reverse osmosis membrane system.

    Science.gov (United States)

    Chen, Xi; Suwarno, Stanislaus Raditya; Chong, Tzyy Haur; McDougald, Diane; Kjelleberg, Staffan; Cohen, Yehuda; Fane, Anthony G; Rice, Scott A

    2013-01-01

    Pseudomonas aeruginosa PAO1 wild type and a mucoid derivative (FRD1) which over produces alginate were used to foul reverse osmosis (RO) membranes. When operated at a constant flux, biofilm formation on the RO membrane resulted in a slow rise in transmembrane pressure (TMP) of 22% for the initial four days of operation, followed by a sharp increase of 159% over the following two days. The initial slow increase in TMP was probably due to the formation of a biofilm on the membrane surface, which then accelerated the rate of biofouling through the effect of concentration polarization. At later stages of operation, most of the bacterial biomass consisted of dead cells. The amount of extracellular polymeric substances appeared to correlate positively with the number of dead cells. The results indicate that prolonging the initial stage of slow TMP increase and avoiding the latter stage of accelerated TMP increase would provide a sustainable operation of the RO system. These results suggest that nutrient limitation could reduce biofilm accumulation and delay the increase in TMP.

  9. Amyloid-beta(29-42) dimer formations studied by a multicanonical-multioverlap molecular dynamics simulation.

    Science.gov (United States)

    Itoh, Satoru G; Okamoto, Yuko

    2008-03-13

    Amyloid-beta peptides are known to form amyloid fibrils and are considered to play an important role in Alzheimer's disease. Amyloid-beta(29-42) is a fragment of the amyloid-beta peptide and also has a tendency to form amyloid fibrils. In order to study the mechanism of amyloidogenesis of this fragment, we applied one of the generalized-ensemble algorithms, the multicanonical-multioverlap algorithm, to amyloid-beta(29-42) dimer in aqueous solution. We obtained a detailed free-energy landscape of the dimer system. From the detailed free-energy landscape, we examined monomer and dimer formations of amyloid-beta(29-42) and deduced dimerization processes, which correspond to seeding processes in the amyloidogenesis of amyloid-beta(29-42).

  10. HILAT a multi-experiment satellite addressing the dynamics of irregularity formation in the high-latitude ionosphere

    Science.gov (United States)

    Fremouw, E. J.

    A combined beacon, in-situ, and optical satellite mission is being prepared for definitive investigation of the formation, development, and decay of plasma-density irregularities in the high-latitude ionosphere. The satellite, named HILAT (P83-1), will carry a VHF-UHF-L-Band coherent beacon for scintillation and TEC measurements, three payloads for in-situ and ionospheric/magnetospheric coupling observations, and a vacuum-ultraviolet imager for meso-scale recording of dayside and nightside auroras and emissions from the F layer. Observations are planned at northern latitudes ranging from the plasmapause to the pole, employing beacon receiving stations which also will decode telemetry from the other payloads. Launch is planned for the boreal summer of 1983.

  11. Dynamics of Magnesite Formation at Low-Temperature and High pCO2 in Aqueous Solution

    Energy Technology Data Exchange (ETDEWEB)

    Qafoku, Odeta; Dixon, David A.; Rosso, Kevin M.; Schaef, Herbert T.; Bowden, Mark E.; Arey, Bruce W.; Felmy, Andrew R.

    2015-09-17

    Like many metal carbonate minerals, despite conditions of supersaturation, precipitation of magnesite from aqueous solution is kinetically hindered at low temperatures, for reasons that remain poorly understood. The present study examines precipitation products from reaction of Mg(OH)2 in aqueous solutions saturated with supercritical CO2 at high pressures (90 atm and 110 atm) and low temperatures (35 °C and 50 °C). Traditional bulk characterization (X-ray diffraction) of the initial solid formed indicated the presence of hydrated magnesium carbonates (hydromagnesite and nesquehonite), thermodynamically metastable phases that were found to slowly react during ageing to the more stable anhydrous form, magnesite, at temperatures as low as 35 °C (135-140 days) and at a faster rate at 50 °C (56 days). Undetected by bulk measurements, detailed examination of the precipitates by scanning electron microscopy (SEM) showed that magnesite is present as a minor component at relatively early reaction times (7 days) at 50 °C. In addition to magnesite dominating the solid phases over time, we find that mangesite nucleation and growth occurs more quickly with increasing partial pressure of CO2, and in electrolyte solutions with high bicarbonate content. Furthermore, formation of magnesite was found to be enhanced in sulfate-rich solutions, compared to chloride-rich solutions. We speculate that much of this behavior is possibly due to sulfate serving as sink of protons generated during carbonation reactions. These results support the importance of integrating magnesite as an equilibrium phase in reactive transport calculations of the effects of carbon dioxide sequestration on subsurface formations at long time scales.

  12. Spontaneous formation and nonequilibrium dynamics of a soliton-shaped Bose-Einstein condensate in a trap.

    Science.gov (United States)

    Berman, Oleg L; Kezerashvili, Roman Ya; Kolmakov, German V; Pomirchi, Leonid M

    2015-06-01

    The Bose-stimulated self-organization of a quasi-two-dimensional nonequilibrium Bose-Einstein condensate in an in-plane potential is proposed. We obtained the solution of the nonlinear, driven-dissipative Gross-Pitaevskii equation for a Bose-Einstein condensate trapped in an external asymmetric parabolic potential within the method of the spectral expansion. We found that, in sharp contrast to previous observations, the condensate can spontaneously acquire a solitonlike shape for spatially homogeneous pumping. This condensate soliton performs oscillatory motion in a parabolic trap and, also, can spontaneously rotate. Stability of the condensate soliton in the spatially asymmetric trap is analyzed. In addition to the nonlinear dynamics of nonequilibrium Bose-Einstein condensates of ultracold atoms, our findings can be applied to the condensates of quantum well excitons and cavity polaritons in semiconductor heterostructure, and to the condensates of photons. PMID:26172766

  13. Glass Formation of n-Butanol: Coarse-grained Molecular Dynamics Simulations Using Gay-Berne Potential Model

    Institute of Scientific and Technical Information of China (English)

    Gui-long Xie; Yong-hong Zhang; Shi-ping Huang

    2012-01-01

    Using coarse-grained molecular dynamics simulations based on Gay-Berne potential model,we have simulated the cooling process of liquid n-butanol.A new set of GB parameters are obtained by fitting the results of density functional theory calculations.The simulations are carried out in the range of 290-50 K with temperature decrements of 10 K.The cooling characteristics are determined on the basis of the variations of the density,the potential energy and orientational order parameter with temperature,whose slopes all show discontinuity.Both the radial distribution function curves and the second-rank orientational correlation function curves exhibit splitting in the second peak.Using the discontinuous change of these thermodynamic and structure properties,we obtain the glass transition at an estimate of temperature Tg=120±10 K,which is in good agreement with experimental results 110±1 K.

  14. Glass Formation of n-Butanol: Coarse-grained Molecular Dynamics Simulations Using Gay-Berne Potential Model

    Science.gov (United States)

    Xie, Gui-long; Zhang, Yong-hong; Huang, Shi-ping

    2012-04-01

    Using coarse-grained molecular dynamics simulations based on Gay-Berne potential model, we have simulated the cooling process of liquid n-butanol. A new set of GB parameters are obtained by fitting the results of density functional theory calculations. The simulations are carried out in the range of 290-50 K with temperature decrements of 10 K. The cooling characteristics are determined on the basis of the variations of the density, the potential energy and orientational order parameter with temperature, whose slopes all show discontinuity. Both the radial distribution function curves and the second-rank orientational correlation function curves exhibit splitting in the second peak. Using the discontinuous change of these thermodynamic and structure properties, we obtain the glass transition at an estimate of temperature Tg=120±10 K, which is in good agreement with experimental results 110±1 K.

  15. Multiscale approach to CO2 hydrate formation in aqueous solution: phase field theory and molecular dynamics. Nucleation and growth.

    Science.gov (United States)

    Tegze, György; Pusztai, Tamás; Tóth, Gyula; Gránásy, László; Svandal, Atle; Buanes, Trygve; Kuznetsova, Tatyana; Kvamme, Bjorn

    2006-06-21

    A phase field theory with model parameters evaluated from atomistic simulations/experiments is applied to predict the nucleation and growth rates of solid CO(2) hydrate in aqueous solutions under conditions typical to underwater natural gas hydrate reservoirs. It is shown that under practical conditions a homogeneous nucleation of the hydrate phase can be ruled out. The growth rate of CO(2) hydrate dendrites has been determined from phase field simulations as a function of composition while using a physical interface thickness (0.85+/-0.07 nm) evaluated from molecular dynamics simulations. The growth rate extrapolated to realistic supersaturations is about three orders of magnitude larger than the respective experimental observation. A possible origin of the discrepancy is discussed. It is suggested that a kinetic barrier reflecting the difficulties in building the complex crystal structure is the most probable source of the deviations.

  16. Dynamic formation of asexual diploid and polyploid lineages: multilocus analysis of Cobitis reveals the mechanisms maintaining the diversity of clones.

    Directory of Open Access Journals (Sweden)

    Karel Janko

    Full Text Available Given the hybrid genomic constitutions and increased ploidy of many asexual animals, the identification of processes governing the origin and maintenance of clonal diversity provides useful information about the evolutionary consequences of interspecific hybridization, asexuality and polyploidy. In order to understand the processes driving observed diversity of biotypes and clones in the Cobitis taenia hybrid complex, we performed fine-scale genetic analysis of Central European hybrid zone between two sexual species using microsatellite genotyping and mtDNA sequencing. We found that the hybrid zone is populated by an assemblage of clonally (gynogenetically reproducing di-, tri- and tetraploid hybrid lineages and that successful clones, which are able of spatial expansion, recruit from two ploidy levels, i.e. diploid and triploid. We further compared the distribution of observed estimates of clonal ages to theoretical distributions simulated under various assumptions and showed that new clones are most likely continuously recruited from ancestral populations. This suggests that the clonal diversity is maintained by dynamic equilibrium between origination and extinction of clonal lineages. On the other hand, an interclonal selection is implied by nonrandom spatial distribution of individual clones with respect to the coexisting sexual species. Importantly, there was no evidence for sexually reproducing hybrids or clonally reproducing non-hybrid forms. Together with previous successful laboratory synthesis of clonal Cobitis hybrids, our data thus provide the most compelling evidence that 1 the origin of asexuality is causally linked to interspecific hybridization; 2 successful establishment of clones is not restricted to one specific ploidy level and 3 the initiation of clonality and polyploidy may be dynamic and continuous in asexual complexes.

  17. Laser powder-bed fusion additive manufacturing: Effects of main physical processes on dynamical melt flow and pore formation from mesoscopic powder simulation

    CERN Document Server

    Khairallah, Saad A; Rubenchik, Alexander

    2015-01-01

    There is a need in laser powder-bed fusion of metals to produce high quality parts without pores by better understanding the complex interplay of process parameters. This study considers the main physical phenomena involved in laser powder interactions using a high fidelity three-dimensional mesoscopic simulation model of 316L stainless steel powder. The model emphasizes the importance of the recoil pressure and the Marangoni effect in generating strong dynamical melt flow and the role of radiative and evaporative cooling at capping the maximum surface temperature. The melt track is divided into an indentation, transition and tail end regions, each being the stage of specific physical effects. Pore formation mechanisms are observed at the edge of a scan track, at the melt pool bottom center during collapse of the indentation, and at the end of the melt track during laser power ramp down. Remedies to these undesirable pores are discussed.

  18. Modelling of keyhole dynamics and porosity formation considering the adaptive keyhole shape and three-phase coupling during deep-penetration laser welding

    International Nuclear Information System (INIS)

    The joint quality of deep-penetration laser beam welding is related to the keyhole behaviour, e.g. keyhole-induced porosities. In this paper, a model which considered the existence of three phases, including plasma gas, liquid metal and solid metal, was proposed to describe the keyhole phenomena of laser welding. The forces of interaction of fluid dynamics in the keyhole and molten pool were modelled using the CFD software, and an adaptive heat source model was proposed for the absorption of laser energy. The molten pool and keyhole phenomena of laser beam welding were simulated using the developed model, as well as the formation of keyhole-induced porosities. It was found that the keyhole depth self-fluctuates in continuous laser welding, and the bubbles formed from keyhole collapse and shrinkage are the cause of keyhole-induced porosity. (paper)

  19. Oligomer Formation of Amyloid-β(29-42) from Its Monomers Using the Hamiltonian Replica-Permutation Molecular Dynamics Simulation.

    Science.gov (United States)

    Itoh, Satoru G; Okumura, Hisashi

    2016-07-14

    Oligomers of amyloid-β peptides (Aβ) are formed during the early stage of the amyloidogenesis process and exhibit neurotoxicity. The oligomer formation process of Aβ and even that of Aβ fragments are still poorly understood, though understanding of these processes is essential for remedying Alzheimer's disease. In order to better understand the oligomerization process of the C-terminal Aβ fragment Aβ(29-42) at the atomic level, we performed the Hamiltonian replica-permutation molecular dynamics simulation with Aβ(29-42) molecules using the explicit water solvent model. We observed that oligomers increased in size through the sequential addition of monomers to the oligomer, rather than through the assembly of small oligomers. Moreover, solvent effects played an important role in this oligomerization process. PMID:27281682

  20. Dynamics of heavy-Rydberg ion-pair formation in K(14p,20p)-SF6, CCl4 collisions

    Science.gov (United States)

    Wang, C. H.; Kelley, M.; Buathong, S.; Dunning, F. B.

    2014-06-01

    The dynamics of formation of heavy-Rydberg ion-pair states through electron transfer in K(np)-SF6, CCl4 collisions is examined by measuring the velocity, angular, and binding energy distributions of the product ion pairs. The results are analyzed with the aid of a Monte Carlo collision code that models both the initial electron capture and the subsequent evolution of the ion pairs. The model simulations are in good agreement with the experimental data and highlight the factors such as Rydberg atom size, the kinetic energy of relative motion of the Rydberg atom and target particle, and (in the case of attaching targets that dissociate) the energetics of dissociation that can be used to control the properties of the product ion-pair states.