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Sample records for anoxic marine sediments

  1. Acetate consumption in anoxic marine sediments: Identification of key players using mixed pure cultures and sediment incubations

    DEFF Research Database (Denmark)

    Na, Hyunsoo

    . While we did not find methanogens to be involved in acetate consumption with sediment incubations, the results from co-culture experiments show that syntrophic growth may allow aceticlastic methanogens to co-exist with sulfate-reducing bacteria in anoxic, sulfate-rich marine environments....... are largely unknown. The main goal of my PhD project was to identify acetate consumers in sulfate-reducing sediments of Aarhus Bay, Denmark. More specifically, we addressed the hypothesis if sulfate-reducing bacteria and methanogenic archaea can oxidize acetate in syntrophy. First, we examined the changes...... sulfate for a year were comparable to those of sediment incubated with high sulfate, on phylum/class levels, but within Deltaproteobacteria, certain sulfate reducers such as Desulfobacterium anilini was found only with low sulfate. In continuous flow-through reactors, bacteria mainly involved in sulfur...

  2. Are iron-phosphate minerals a sink for phosphorus in anoxic Black Sea sediments?

    Directory of Open Access Journals (Sweden)

    Nikki Dijkstra

    Full Text Available Phosphorus (P is a key nutrient for marine organisms. The only long-term removal pathway for P in the marine realm is burial in sediments. Iron (Fe bound P accounts for a significant proportion of this burial at the global scale. In sediments underlying anoxic bottom waters, burial of Fe-bound P is generally assumed to be negligible because of reductive dissolution of Fe(III (oxyhydroxides and release of the associated P. However, recent work suggests that Fe-bound P is an important burial phase in euxinic (i.e. anoxic and sulfidic basin sediments in the Baltic Sea. In this study, we investigate the role of Fe-bound P as a potential sink for P in Black Sea sediments overlain by oxic and euxinic bottom waters. Sequential P extractions performed on sediments from six multicores along two shelf-to-basin transects provide evidence for the burial of Fe-bound P at all sites, including those in the euxinic deep basin. In the latter sediments, Fe-bound P accounts for more than 20% of the total sedimentary P pool. We suggest that this P is present in the form of reduced Fe-P minerals. We hypothesize that these minerals may be formed as inclusions in sulfur-disproportionating Deltaproteobacteria. Further research is required to elucidate the exact mineral form and formation mechanism of this P burial phase, as well as its role as a sink for P in sulfide-rich marine sediments.

  3. Are iron-phosphate minerals a sink for phosphorus in anoxic Black Sea sediments?

    Science.gov (United States)

    Dijkstra, Nikki; Kraal, Peter; Kuypers, Marcel M M; Schnetger, Bernhard; Slomp, Caroline P

    2014-01-01

    Phosphorus (P) is a key nutrient for marine organisms. The only long-term removal pathway for P in the marine realm is burial in sediments. Iron (Fe) bound P accounts for a significant proportion of this burial at the global scale. In sediments underlying anoxic bottom waters, burial of Fe-bound P is generally assumed to be negligible because of reductive dissolution of Fe(III) (oxyhydr)oxides and release of the associated P. However, recent work suggests that Fe-bound P is an important burial phase in euxinic (i.e. anoxic and sulfidic) basin sediments in the Baltic Sea. In this study, we investigate the role of Fe-bound P as a potential sink for P in Black Sea sediments overlain by oxic and euxinic bottom waters. Sequential P extractions performed on sediments from six multicores along two shelf-to-basin transects provide evidence for the burial of Fe-bound P at all sites, including those in the euxinic deep basin. In the latter sediments, Fe-bound P accounts for more than 20% of the total sedimentary P pool. We suggest that this P is present in the form of reduced Fe-P minerals. We hypothesize that these minerals may be formed as inclusions in sulfur-disproportionating Deltaproteobacteria. Further research is required to elucidate the exact mineral form and formation mechanism of this P burial phase, as well as its role as a sink for P in sulfide-rich marine sediments.

  4. Past climate clues from anoxic basin sediments: Cariaco basin (Venezuela) as a tropical climate type section

    Energy Technology Data Exchange (ETDEWEB)

    Peterson, L.C.

    2008-07-01

    This paper discusses how anoxic conditions in deep oceans are the result of a dynamic balance between oxygen supply and oxygen consumption. The author states that a significant consequence of ancient anoxic episodes was that the accumulation and preservation of organic matter in marine sediments were greatly enhanced, allowing the generation of potential petroleum source rocks. Changes in climatic conditions both in the short term as well as over longer periods of time are examined on the basis of oxygen isotope quantities found in ice-cores drilled in Greenland. The influence of these climatic changes on anoxic conditions in the oceans is discussed.

  5. Metabolism in anoxic permeable sediments is dominated by eukaryotic dark fermentation

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    Bourke, Michael F.; Marriott, Philip J.; Glud, Ronnie N.; Hasler-Sheetal, Harald; Kamalanathan, Manoj; Beardall, John; Greening, Chris; Cook, Perran L. M.

    2017-01-01

    Permeable sediments are common across continental shelves and are critical contributors to marine biogeochemical cycling. Organic matter in permeable sediments is dominated by microalgae, which as eukaryotes have different anaerobic metabolic pathways to bacteria and archaea. Here we present analyses of flow-through reactor experiments showing that dissolved inorganic carbon is produced predominantly as a result of anaerobic eukaryotic metabolic activity. In our experiments, anaerobic production of dissolved inorganic carbon was consistently accompanied by large dissolved H2 production rates, suggesting the presence of fermentation. The production of both dissolved inorganic carbon and H2 persisted following administration of broad spectrum bactericidal antibiotics, but ceased following treatment with metronidazole. Metronidazole inhibits the ferredoxin/hydrogenase pathway of fermentative eukaryotic H2 production, suggesting that pathway as the source of H2 and dissolved inorganic carbon production. Metabolomic analysis showed large increases in lipid production at the onset of anoxia, consistent with documented pathways of anoxic dark fermentation in microalgae. Cell counts revealed a predominance of microalgae in the sediments. H2 production was observed in dark anoxic cultures of diatoms (Fragilariopsis sp.) and a chlorophyte (Pyramimonas) isolated from the study site, substantiating the hypothesis that microalgae undertake fermentation. We conclude that microalgal dark fermentation could be an important energy-conserving pathway in permeable sediments.

  6. Chromium isotope composition of reducing and anoxic sediments from the Peru Margin and Cariaco Basin

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    Gueguen, B.; Planavsky, N.; Wang, X.; Algeo, T. J.; Peterson, L. C.; Reinhard, C. T.

    2014-12-01

    Chromium isotope systematics in marine sediments are now being used as a new redox proxy of the modern and ancient Earth's surface. Chromium is primarily delivered to the oceans by riverine inputs through weathering of Cr(III)-rich minerals present in the continental crust and oxidation of insoluble Cr(III) to soluble Cr(VI) species. Since oxidation-reduction reactions fractionate Cr isotopes whereby oxidized Cr(VI) species are preferentially enriched in heavy Cr isotopes, the Cr isotope composition of marine sediments may be useful tracers of redox conditions at the Earth's surface through geological time. Chromium is quantitatively removed in organic-rich sediments where reducing conditions prevail and promote reduction of Cr(VI) to Cr(III), and thus, these sediments should capture the ambient seawater Cr isotope composition. However, the isotopic composition of modern organic-rich sediments is poorly documented so far, and this step is essential for further modeling the global oceanic Cr isotope mass balance and assessing the effects of sedimentation and post-depositional processes on the marine Cr isotopes archive. In this study, we have characterized modern marine organic-rich sediments for their Cr isotope composition (δ53/52Cr) from two different settings, the Peru margin upwelling zone and the anoxic Cariaco Basin (Venezuela). Chromium isotopes were measured on a MC-ICP-MS (Nu Plasma) using a double-spike correction method. The authigenic fraction of shallow samples from the Peru margin sedimentary sequence with a high Total Organic Carbon (TOC) content (>10 wt%) yield an average δ53/52Crauthigenic value of +0.67 ±0.05 ‰ (2sd). However, although this value is close to the seawater value (Atlantic Ocean) and to Cariaco basin sediments (~ +0.6 ‰), reducing sediments from the Peru margin are on average isotopically slightly heavier, especially in samples having a low authigenic fraction and a low TOC content (δ53/52Crauthigenic values up to +1.30

  7. Uranium(IV) adsorption by natural organic matter in anoxic sediments

    Energy Technology Data Exchange (ETDEWEB)

    Bone, Sharon E.; Dynes, James; Cliff, John B.; Barger, John

    2017-01-09

    Uranium is an important fuel source and a global environmental contaminant. It accumulates in the tetravalent state, U(IV), in anoxic sediments, including ore deposits, marine basins, and contaminated aquifers. However, very little is known about the speciation of U(IV) in low temperature geochemical environments, inhibiting the development of a conceptual model of U behavior. Until recently, U(IV) was assumed to exist predominantly as the sparingly soluble mineral uraninite (UO2) in anoxic sediments; yet studies now show that UO2 is not often dominant in these environments. However, a model of U(IV) speciation under environmentally relevant conditions has not yet been developed. Here we show that complexes of U(IV) adsorb on organic carbon and organic carbon-coated clays in an organic-rich natural substrate under field-relevant conditions. Whereas previous research assumed that the U(IV) product depended on the reduction pathway, our results demonstrate that UO2 formation can be inhibited simply by decreasing the U:solid ratio. Thus, it is the number and type of surface ligands that controls U(IV) speciation subsequent to U(VI) reduction. Projections of U transport and bioavailability, and thus its threat to human and ecosystem health, must consider retention of U(IV) ions within the local sediment environment.

  8. Long distance electron transmission in marine sediment

    DEFF Research Database (Denmark)

    Risgaard-Petersen, Nils; Nielsen, Lars Peter

    processes leads to formation of electrical fields, which modifies ion transport. The local proton producing and proton consuming half reactions induces pH extremes that accelerate dissolution of iron sul-phides and calcium carbonates in anoxic layers and promotes the formation of Mg-calcite and iron oxides......Geochemical observations in marine sediment have recently shown that electric currents may intimately couple spatially separated biogeochemical processes like oxygen reduction at the sediment surface and hydrogen sul-phide oxidation in anoxic layers centimeters below 1. Further experimental studies...... suggest that the electron conductance is mediated by microorgan-isms. The spatial separation of electron and proton donors and acceptors has major impacts on element cycling by redox processes, pH balances, mineral dissolution/precipitations, and electromigration of ions. The sepa-ration of redox...

  9. Metabolism in anoxic permeable sediments is dominated by eukaryotic dark fermentation

    DEFF Research Database (Denmark)

    Bourke, Michael F.; Marriott, Philip J.; Glud, Ronnie N.

    2017-01-01

    Permeable sediments are common across continental shelves and are critical contributors to marine biogeochemical cycling. Organic matter in permeable sediments is dominated by microalgae, which as eukaryotes have different anaerobic metabolic pathways to prokaryotes such as bacteria and archaea....... Here we present analyses of flow-through reactor experiments showing that dissolved inorganic carbon is produced predominantly as a result of anaerobic eukaryotic metabolic activity. In our experiments, anaerobic production of dissolved inorganic carbon was consistently accompanied by large dissolved H....../hydrogenase pathway of fermentative eukaryotic H2 production, suggesting that pathway as the source of H2 and dissolved inorganic carbon production. Metabolomic analysis showed large increases in lipid production at the onset of anoxia, consistent with documented pathways of anoxic dark fermentation in microalgae...

  10. Role of chemolithoautotrophic microorganisms involved in nitrogen and sulfur cycling in coastal marine sediments

    NARCIS (Netherlands)

    Lipsewers, Y.A.

    2017-01-01

    SummaryThe role of chemolithoautotrophic microorganisms has been considered to be of minor importancein coastal marine sediments although it has not been investigated in depth. Additionally,the impact of seasonal hypoxic/anoxic conditions on microbial chemolithoautotrophy in coastalmarine sediments

  11. A model for microbial phosphorus cycling in bioturbated marine sediments

    DEFF Research Database (Denmark)

    Dale, Andrew W.; Boyle, R. A.; Lenton, Timothy M.

    2016-01-01

    A diagenetic model is used to simulate the diagenesis and burial of particulate organic carbon (Corg) and phosphorus (P) in marine sediments underlying anoxic versus oxic bottom waters. The latter are physically mixed by animals moving through the surface sediment (bioturbation) and ventilated...... P pump) allows preferential mineralization of the bulk Porg pool relative to Corg during both aerobic and anaerobic respiration and is consistent with the database. Results with this model show that P burial is strongly enhanced in sediments hosting fauna. Animals mix highly labile Porg away from....... The results also help to explain Corg:Porg ratios in the geological record and the persistence of Porg in ancient marine sediments. © 2016 Elsevier Ltd....

  12. Factors that control the stable carbon isotopic composition of methane produced in an anoxic marine sediment

    Science.gov (United States)

    Alperin, M. J.; Blair, Neal E.; Albert, D. B.; Hoehler, T. M.; Martens, C. S.

    1993-01-01

    The carbon isotopic composition of methane produced in anoxic marine sediment is controlled by four factors: (1) the pathway of methane formation, (2) the isotopic composition of the methanogenic precursors, (3) the isotope fractionation factors for methane production, and (4) the isotope fractionation associated with methane oxidation. The importance of each factor was evaluated by monitoring stable carbon isotope ratios in methane produced by a sediment microcosm. Methane did not accumulate during the initial 42-day period when sediment contained sulfate, indicating little methane production from 'noncompetitive' substrates. Following sulfate depletion, methane accumulation proceeded in three distinct phases. First, CO2 reduction was the dominant methanogenic pathway and the isotopic composition of the methane produced ranged from -80 to -94 per thousand. The acetate concentration increased during this phase, suggesting that acetoclastic methanogenic bacteria were unable to keep pace with acetate production. Second, acetate fermentation became the dominant methanogenic pathway as bacteria responded to elevated acetate concentrations. The methane produced during this phase was progressively enriched in C-13, reaching a maximum delta(C-13) value of -42 per thousand. Third, the acetate pool experienced a precipitous decline from greater than 5 mM to less than 20 micro-M and methane production was again dominated by CO2 reduction. The delta(C-13) of methane produced during this final phase ranged from -46 to -58 per thousand. Methane oxidation concurrent with methane production was detected throughout the period of methane accumulation, at rates equivalent to 1 to 8 percent of the gross methane production rate. Thus methane oxidation was too slow to have significantly modified the isotopic signature of methane. A comparison of microcosm and field data suggests that similar microbial interactions may control seasonal variability in the isotopic composition of methane

  13. Uranium and plutonium in anoxic marine sediments of the Santiago River mouth (Eastern Pacific, Mexico).

    Science.gov (United States)

    Almazán-Torres, María Guadalupe; Ordóñez-Regil, Eduardo; Ruiz-Fernández, Ana Carolina

    2016-11-01

    The uranium (U) and plutonium (Pu) content with depth in a sediment core collected in the continental shelf off the mouth of the Santiago River in the Mexican Pacific was studied to evaluate the contamination effects of the effluent of the Santiago-Lerma River as it moves into the sea. The large mass of terrestrial detritus delivered by the river influences the physicochemical and geochemical processes in the seafloor. Abnormal concentrations of U and Pu in sediments were examined as indicative of the effects of anoxic conditions. One of the indicators of pollution of seawater is the bacterial activity of the shallow seabed layer; and among the prevailing bacteria, the magnetotactic ones induce the formation of euhedral and framboidal shapes (pyrite). These pyrite entities are by-products of anoxic environments loaded with decomposing detrital material and are very abundant in the surface layers of the sediment core analyzed. The pyrite formation is the result of a biochemical reaction between iron and organic sulphur reduced by bacteria, and the pyrite entities precipitate to the seafloor. In the same upper zone of the profile, 238 U is readily immobilized, while 234 U is oxidized and dissolved in seawater by the effect of hot atom chemistry. This may cause the activity ratio (AR) 234 U/ 238 U disequilibrium (near 0.41). Furthermore, in the shallow layer of the sediment core, an abnormally high concentration of 239+240 Pu was detected. In this upper layer, the activity concentrations found were 3.19 Bq kg -1 for 238 U, 1.32 kg -1 for 234 U and 2.78 Bq kg -1 for 239+240 Pu. In the lower fractions of the sediment core, normal values of AR 234 U/ 238 U (≈1) were found, with traces of 239+240 Pu. Copyright © 2016 Elsevier Ltd. All rights reserved.

  14. A carbon isotope budget for an anoxic marine sediment

    International Nuclear Information System (INIS)

    Boehme, S.E.; Blair, N.E.

    1991-01-01

    A carbon isotope budget has been determined for the coastal marine site, Cape Lookout Bight, NC. Isotope measurements of methane and σCO 2 fluxing out and buried in these sediments were applied to previously measured flux data (Martens et al., in press) to predict the isotopic composition of the incoming metabolizable organic matter. Methane leaves the sediment predominantly via ebullition with an isotopic composition of -60 per mil. Less than 2% of the methane produced is buried with an average diffusional flux value of -17 per mil and a burial value of +11 per mil. The isotope budget predicts a metabolizable organic carbon isotope signature of -19.3 per mil which is in excellent agreement with the measured total organic carbon value of -19.2 ± 0.3 per mil implying that the dominant remineralization processes have been identified

  15. Anoxic carbon degradation in Arctic sediments: Microbial transformations of complex substrates

    DEFF Research Database (Denmark)

    Arnosti, Carol; Finke, Niko; Larsen, Ole

    2005-01-01

    of activity that it fueled, its soluble nature, and its relatively high (50%) carbohydrate content. The microbial community in these cold anoxic sediments clearly has the capacity to react rapidly to carbon input; extent and timecourse of remineralization of added carbon is similar to observations made......Complex substrates are degraded in anoxic sediments by the concerted activities of diverse microbial communities. To explore the effects of substrate complexity on carbon transformations in permanently cold anoxic sediments, four substrates—Spirulina cells, Isochrysis cells, and soluble high...... which they were derived. Although Spirulina and Iso-Ex differed in physical and chemical characteristics (solid/soluble, C/N ratio, lipid and carbohydrate content), nearly identical quantities of carbon were respired to CO2. In contrast, only 15% of Spir-Ex carbon was respired, despite the initial burst...

  16. Polyphosphates as a source of enhanced P fluxes in marine sediments overlain by anoxic waters: Evidence from 31P NMR

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    Ingall Ellery

    2005-06-01

    Full Text Available Sedimentary phosphorus (P composition was investigated in Effingham Inlet, a fjord located on the west coast of Vancouver Island in Barkley Sound. Solid-state 31P nuclear magnetic resonance (NMR spectroscopy was applied to demineralized sediment samples from sites overlain by oxic and anoxic bottom waters. The two sites were similar in terms of key diagenetic parameters, including the mass accumulation rate, integrated sulfate reduction rate, and bulk sediment organic carbon content. In contrast, P benthic fluxes were much higher at the anoxic site. 31P NMR results show that P esters and phosphonates are the major organic P species present at the surface and at depth in sediments at both sites. Polyphosphates were only found in the surface sediment of the site overlain by oxic waters. The varying stability of polyphosphates in microorganisms under different redox conditions may, in part, explain their distribution as well as differences in P flux between the two sites.

  17. High bacterial biodiversity increases degradation performance of hydrocarbons during bioremediation of contaminated harbor marine sediments

    International Nuclear Information System (INIS)

    Dell'Anno, Antonio; Beolchini, Francesca; Rocchetti, Laura; Luna, Gian Marco; Danovaro, Roberto

    2012-01-01

    We investigated changes of bacterial abundance and biodiversity during bioremediation experiments carried out on oxic and anoxic marine harbor sediments contaminated with hydrocarbons. Oxic sediments, supplied with inorganic nutrients, were incubated in aerobic conditions at 20 °C and 35 °C for 30 days, whereas anoxic sediments, amended with organic substrates, were incubated in anaerobic conditions at the same temperatures for 60 days. Results reported here indicate that temperature exerted the main effect on bacterial abundance, diversity and assemblage composition. At higher temperature bacterial diversity and evenness increased significantly in aerobic conditions, whilst decreased in anaerobic conditions. In both aerobic and anaerobic conditions, biodegradation efficiencies of hydrocarbons were significantly and positively related with bacterial richness and evenness. Overall results presented here suggest that bioremediation strategies, which can sustain high levels of bacterial diversity rather than the selection of specific taxa, may significantly increase the efficiency of hydrocarbon degradation in contaminated marine sediments. - Highlights: ► Bioremediation performance was investigated on hydrocarbon contaminated sediments. ► Major changes in bacterial diversity and assemblage composition were observed. ► Temperature exerted the major effect on bacterial assemblages. ► High bacterial diversity increased significantly biodegradation performance. ► This should be considered for sediment remediation by bio-treatments. - Bioremediation strategies which can sustain high levels of bacterial diversity may significantly increase the biodegradation of hydrocarbons in contaminated marine sediments.

  18. Biogeochemistry of pyrite and iron sulfide oxidation in marine sediments

    DEFF Research Database (Denmark)

    Schippers, A.; Jørgensen, BB

    2002-01-01

    as substrates and NO3- as electron acceptor, in the presence of (FeS2)-Fe-55, to test for co-oxidation of FeS2, but an anaerobic microbial dissolution of (FeS2)-Fe-55, could not been detected. FeS2 and FeS were not oxidized by amorphous Fe(III) oxide in the presence of Fe-complexing organic compounds......Pyrite (FeS2) and iron monosulfide (FeS) play a central role in the sulfur and iron cycles of marine sediments, They may be buried in the sediment or oxidized by O-2 after transport by bioturbation to the sediment surface. FeS2 and FeS may also be oxidized within the anoxic sediment in which NO3...... marine sediments and incubated at different temperatures for > 1 yr. Bacteria could not be enriched with FeS2 as substrate or with FeS and amorphous Fe(III) oxide. With FeS and NO3-, 14 enrichments were obtained. One of these enrichments was further cultivated anaerobically with Fe2+ and S-0...

  19. Benthic protists and fungi of Mediterranean deep hypsersaline anoxic basin redoxcline sediments.

    Science.gov (United States)

    Bernhard, Joan M; Kormas, Konstantinos; Pachiadaki, Maria G; Rocke, Emma; Beaudoin, David J; Morrison, Colin; Visscher, Pieter T; Cobban, Alec; Starczak, Victoria R; Edgcomb, Virginia P

    2014-01-01

    Some of the most extreme marine habitats known are the Mediterranean deep hypersaline anoxic basins (DHABs; water depth ∼3500 m). Brines of DHABs are nearly saturated with salt, leading many to suspect they are uninhabitable for eukaryotes. While diverse bacterial and protistan communities are reported from some DHAB water-column haloclines and brines, the existence and activity of benthic DHAB protists have rarely been explored. Here, we report findings regarding protists and fungi recovered from sediments of three DHAB (Discovery, Urania, L' Atalante) haloclines, and compare these to communities from sediments underlying normoxic waters of typical Mediterranean salinity. Halocline sediments, where the redoxcline impinges the seafloor, were studied from all three DHABs. Microscopic cell counts suggested that halocline sediments supported denser protist populations than those in adjacent control sediments. Pyrosequencing analysis based on ribosomal RNA detected eukaryotic ribotypes in the halocline sediments from each of the three DHABs, most of which were fungi. Sequences affiliated with Ustilaginomycotina Basidiomycota were the most abundant eukaryotic signatures detected. Benthic communities in these DHABs appeared to differ, as expected, due to differing brine chemistries. Microscopy indicated that only a low proportion of protists appeared to bear associated putative symbionts. In a considerable number of cases, when prokaryotes were associated with a protist, DAPI staining did not reveal presence of any nuclei, suggesting that at least some protists were carcasses inhabited by prokaryotic scavengers.

  20. Culture-Dependent and Independent Studies of Microbial Diversity in Highly Copper-Contaminated Chilean Marine Sediments

    NARCIS (Netherlands)

    Besaury, L.; Marty, F.; Buquet, S.; Mesnage, V.; Muijzer, G.; Quillet, L.

    2013-01-01

    Cultivation and molecular-based approaches were used to study microbial diversity in two Chilean marine sediments contaminated with high (835 ppm) and very high concentrations of copper (1,533 ppm). The diversity of cultivable bacteria resistant to copper was studied at oxic and anoxic conditions,

  1. Anoxic microniches in marine sediments induced by aggregate settlement

    DEFF Research Database (Denmark)

    Lehto, Niklas; Glud, Ronnie N.; Nordi, Gunnvør á

    2014-01-01

    an exponential increase in the mineralisation rate constant and a gradual exhaustion of reactive organic material. The peak value of the time-dependent reaction rate constant of organic matter mineralisation (kOMM) was seven to sixty times greater than analogous values measured previously in water column...... experiments. The validated model was used to investigate how the size and reactivity of parcels of organic matter influence the formation of anoxic microniches at the sediment–water interface of typical deep-sea environments. As well as kOMM, the concentration of reactive organic matter in the aggregate, its...... size and porosity were also critical in determining the likelihood of anoxic microniche formation. For the optimum fitted parameters describing kOMM and the concentration of reactive organic atter, the minimum diameter of the parcel to induce anoxia was 1.8 mm, hereas it was 2.8 mm to make...

  2. Microbiological reduction of Sb(V) in anoxic freshwater sediments

    Science.gov (United States)

    Oremland, Ronald S.; Kulp, Thomas R.; Miller, Laurence G.; Braiotta, Franco; Webb, Samuel M.; Kocar, Benjamin D; Blum, Jodi S.

    2014-01-01

    Microbiological reduction of millimolar concentrations of Sb(V) to Sb(III) was observed in anoxic sediments from two freshwater settings: (1) a Sb- and As-contaminated mine site (Stibnite Mine) in central Idaho and 2) an uncontaminated suburban lake (Searsville Lake) in the San Francisco Bay Area. Rates of Sb(V) reduction in anoxic sediment microcosms and enrichment cultures were enhanced by amendment with lactate or acetate as electron donors but not by H2, and no reduction occurred in sterilized controls. Addition of 2-14C-acetate to Stibnite Mine microcosms resulted in the production of 14CO2 coupled to Sb(V) reduction, suggesting that this process proceeds by a dissimilatory respiratory pathway in those sediments. Antimony(V) reduction in Searsville Lake sediments was not coupled to acetate mineralization and may be associated with Sb-resistance. The microcosms and enrichment cultures also reduced sulfate, and the precipitation of insoluble Sb(III)-sulfide complexes was a major sink for reduced Sb. The reduction of Sb(V) by Stibnite Mine sediments was inhibited by As(V), suggesting that As(V) is a preferred electron acceptor for the indigenous community. These findings indicate a novel pathway for anaerobic microbiological respiration and suggest that communities capable of reducing high concentrations of Sb(V) commonly occur naturally in the environment.

  3. Massive expansion of marine archaea during a mid-Cretaceous oceanic anoxic event

    DEFF Research Database (Denmark)

    Kuypers, M.M.M.; Blokker, P.; Erbacher, J.

    2001-01-01

    molecular fossils indicates that these archaea were living chemoautotrophically. Their massive expansion may have been a response to the strong stratification of the ocean during this anoxic event. Indeed, the sedimentary record of archaeal membrane lipids suggests that this anoxic event marks a time......Biogeochemical and stable carbon isotopic analysis of black-shale sequences deposited during an Albian oceanic anoxic event (∼112 million years ago) indicate that up to 80 weight percent of sedimentary organic carbon is derived from marine, nonthermophilic archaea. The carbon-13 content of archaeal...

  4. Plutonium behavior during the early diagenesis of marine sediments: applications to two marine environments labelled by radionuclides released from reprocessing plants

    International Nuclear Information System (INIS)

    Gouzy, A.

    2004-12-01

    The plutonium released into the English Channel and the Irish Sea by nuclear fuel reprocessing plants is mainly associated to sediments. Nevertheless, this association is partially reversible. This work combines a field study, carried out on the Cumbrian mud patch and the Esk estuary (Eastern Irish Sea), and laboratory experiments performed on carbonaceous coarse-grained sediments collected in the Central Channel. It presents new data on the plutonium solid partition in sediments and suggests realistic scenarios for describing its release from sediments to the water column. The role of reactive sulphides acting as temporary sink phases is shown in anoxic sediments; those sulphides are liable to release dissolved plutonium upon their oxidation. The plutonium is also bound to carbonates within the carbonaceous matrix and as carbonate surface complexes. Conceptual schemes of the behaviour of the plutonium in marine sediments are proposed; they highlight the strong remobilization potential of plutonium from marine sediments to the interstitial water. Its plutonium content can be injected into the overlying water column. (author)

  5. Effective bioremediation strategy for rapid in situ cleanup of anoxic marine sediments in mesocosm oil spill simulation.

    Directory of Open Access Journals (Sweden)

    Maria eGenovese

    2014-04-01

    Full Text Available The purpose of present study was the simulation of an oil spill accompanied by burial of significant amount of petroleum hydrocarbons (PHs in coastal sediments. Approximately 1,000 kg of sediments collected in Messina harbor were spiked with Bunker C furnace fuel oil (6,500 ppm. The rapid consumption of oxygen by aerobic heterotrophs created highly reduced conditions in the sediments with subsequent recession of biodegradation rates. As follows, after three months of ageing, the anaerobic sediments did not exhibit any significant levels of biodegradation and more than 80% of added Bunker C fuel oil remained buried. Anaerobic microbial community exhibited a strong enrichment in sulfate-reducing PHs-degrading and PHs-associated Deltaproteobacteria. As an effective bioremediation strategy to clean up these contaminated sediments, we applied a Modular Slurry System (MSS allowing the containment of sediments and their physical-chemical treatment, e.g. aeration. Aeration for three months has increased the removal of main PHs contaminants up to 98%. As revealed by CARD-FISH, qPCR and 16S rRNA gene clone library analyses, addition of Bunker C fuel oil initially affected the activity of autochthonous aerobic obligate marine hydrocarbonoclastic bacteria (OMHCB, and after one month more than the third of microbial population was represented by Alcanivorax-, Cycloclasticus- and Marinobacter-related organisms. In the end of the experiment, the microbial community composition has returned to a status typically observed in pristine marine ecosystems with no detectable OMHCB present. Eco-toxicological bioassay revealed that the toxicity of sediments after treatment was substantially decreased. Thus, our studies demonstrated that petroleum-contaminated anaerobic marine sediments could efficiently be cleaned through an in situ oxygenation which stimulates their self-cleaning potential due to reawakening of allochtonous aerobic OMHCB.

  6. Plutonium behavior during the early diagenesis of marine sediments: applications to two marine environments labelled by radionuclides released from reprocessing plants; Etude du comportement du plutonium au cours de la diagenese precoce des sediments marins: applications a deux environnements marins marques par les rejets issus d'usines de retraitement de combustibles uses

    Energy Technology Data Exchange (ETDEWEB)

    Gouzy, A

    2004-12-15

    The plutonium released into the English Channel and the Irish Sea by nuclear fuel reprocessing plants is mainly associated to sediments. Nevertheless, this association is partially reversible. This work combines a field study, carried out on the Cumbrian mud patch and the Esk estuary (Eastern Irish Sea), and laboratory experiments performed on carbonaceous coarse-grained sediments collected in the Central Channel. It presents new data on the plutonium solid partition in sediments and suggests realistic scenarios for describing its release from sediments to the water column. The role of reactive sulphides acting as temporary sink phases is shown in anoxic sediments; those sulphides are liable to release dissolved plutonium upon their oxidation. The plutonium is also bound to carbonates within the carbonaceous matrix and as carbonate surface complexes. Conceptual schemes of the behaviour of the plutonium in marine sediments are proposed; they highlight the strong remobilization potential of plutonium from marine sediments to the interstitial water. Its plutonium content can be injected into the overlying water column. (author)

  7. Plutonium behavior during the early diagenesis of marine sediments: applications to two marine environments labelled by radionuclides released from reprocessing plants; Etude du comportement du plutonium au cours de la diagenese precoce des sediments marins: applications a deux environnements marins marques par les rejets issus d'usines de retraitement de combustibles uses

    Energy Technology Data Exchange (ETDEWEB)

    Gouzy, A

    2004-12-15

    The plutonium released into the English Channel and the Irish Sea by nuclear fuel reprocessing plants is mainly associated to sediments. Nevertheless, this association is partially reversible. This work combines a field study, carried out on the Cumbrian mud patch and the Esk estuary (Eastern Irish Sea), and laboratory experiments performed on carbonaceous coarse-grained sediments collected in the Central Channel. It presents new data on the plutonium solid partition in sediments and suggests realistic scenarios for describing its release from sediments to the water column. The role of reactive sulphides acting as temporary sink phases is shown in anoxic sediments; those sulphides are liable to release dissolved plutonium upon their oxidation. The plutonium is also bound to carbonates within the carbonaceous matrix and as carbonate surface complexes. Conceptual schemes of the behaviour of the plutonium in marine sediments are proposed; they highlight the strong remobilization potential of plutonium from marine sediments to the interstitial water. Its plutonium content can be injected into the overlying water column. (author)

  8. Laboratory experiments on the transfer dynamics of plutonium from marine sediments to sea water and to marine organisms

    International Nuclear Information System (INIS)

    Mo, T.; Lowman, F.G.

    1975-01-01

    The leachability of 239 240 Pu from a fine contaminated calcareous sediment to aerated open sea water and to anoxic sea water was measured. The distribution coefficient for 239 240 Pu from sediment to sea water was 6.1 x 10 -5 for aerated water and 2.6 x 10 -6 for anoxic water. Experiments on the uptake of 239 240 Pu by the clams Donax denticulatus, and Lucina pectinata, were done in aquaria containing kilogram quantities of sediment from the Bravo Crater at Bikini Atoll. The concentration factor for 239 240 Pu by the soft parts of these clams was about 200. All the plutonium taken up in the soft parts was associated with the gill, mantle and siphon. No plutonium was detected in the adductor muscles or hepatopancreas. The smooth surfaces of the shells of the Donax did not show any detectable plutonium, but the rough shell surfaces of the Lucina concentrated plutonium by a factor of 1.10 x 10 4 over that in the sea water. Marine periphyton cultured on glass plates in an aquarium concentrated 239 240 Pu by a factor of about 7 x 10 3 over that in the sea water. (U.S.)

  9. Microbial Oxidation of Pyrite Coupled to Nitrate Reduction in Anoxic Groundwater Sediment

    DEFF Research Database (Denmark)

    Jørgensen, Christian Juncher; Elberling, Bo; Jacobsen, Ole Stig

    2009-01-01

    denitrification process with pyrite as the primary electron donor. The process demonstrates a temperature dependency (Q10) of 1.8 and could be completely inhibited by addition of a bactericide (NaN3). Experimentally determined denitrification rates show that more than 50% of the observed nitrate reduction can...... be ascribed to pyrite oxidation. The apparent zero-order denitrification rate in anoxic pyrite containing sediment at groundwater temperature has been determined to be 2-3 µmol NO3- kg-1 day-1. The in situ groundwater chemistry at the boundary between the redoxcline and the anoxic zone reveals that between 65......-anoxic boundary in sandy aquifers thus determining the position and downward progression of the redox boundary between nitrate-containing and nitrate-free groundwater....

  10. Apparent Minimum Free Energy Requirements for Methanogenic Archaea and Sulfate-Reducing Bacteria in an Anoxic Marine Sediment

    Science.gov (United States)

    Hoehler, Tori M.; Alperin, Marc J.; Albert, Daniel B.; Martens, Christopher S.; DeVincenzi, Don (Technical Monitor)

    2000-01-01

    Among the most fundamental constraints governing the distribution of microorganisms in the environment is the availability of chemical energy at biologically useful levels. To assess the minimum free energy yield that can support microbial metabolism in situ, we examined the thermodynamics of H2-consuming processes in anoxic sediments from Cape Lookout Bight, NC, USA. Depth distributions of H2 partial pressure, along with a suite of relevant concentration data, were determined in sediment cores collected in November (at 14.5 C) and August (at 27 C) and used to calculate free energy yields for methanogenesis and sulfate reduction. At both times of year, and for both processes, free energy yields gradually decreased (became less negative) with depth before reaching an apparent asymptote. Sulfate reducing bacteria exhibited an asymptote of -19.1 +/- 1.7 kj(mol SO4(2-)(sup -1) while methanogenic archaea were apparently supported by energy yields as small as -10.6 +/- 0.7 kj(mol CH4)(sup -1).

  11. Effect of resuspension on the release of heavy metals and water chemistry in anoxic and oxic sediments

    Energy Technology Data Exchange (ETDEWEB)

    Hwang, Kyung-Yup; Kim, Hong-Seok; Hwang, Inseong [School of Civil and Environmental Engineering, Pusan National University, Busan (Korea, Republic of)

    2011-10-15

    Two types of river sediments with contrasting characteristics (anoxic or oxic) were resuspended and the release of heavy metals and changes in water chemistry were investigated. During resuspension of the anoxic sediment, the dissolved oxygen (DO) concentration and redox potential of the water layer decreased abruptly within the first 1 min, followed by increases toward the end of the resuspension period. Heavy metals were released rapidly in the first 6 h, probably due to the oxidation of acid volatile sulfide (AVS) of the anoxic sediment, and then the aqueous phase concentrations of the heavy metals decreased due to resorption onto the sediment until the 12-h point. During resuspension of the oxic sediment, the DO concentration and redox potential remained relatively constant in the oxic ranges. The heavy metals were released from the oxic sediment gradually during a 24-h resuspension period. The temporal maximum concentrations of Ni, Cu, Zn, and Cd in the aqueous phases in both experiments frequently exceeded the USEPA water quality criteria or the water quality guidelines of Australia and New Zealand. This suggests that a resuspension event could bring about temporal water quality deterioration in the two sediment environments. (Copyright copyright 2011 WILEY-VCH Verlag GmbH and Co. KGaA, Weinheim)

  12. Recycling and burial of phosphorus in sediments of an anoxic fjord-the By Fjord, western Sweden

    DEFF Research Database (Denmark)

    Viktorsson, Lena; Kononets, Mikhail; Roos, Per

    2013-01-01

    Recycling and burial of sediment phosphorus were studied in the By Fjord, western Sweden, during the years 2009 to 2010 using autonomous benthic landers and sediment sampling. The By Fjord is a small fjord with a shallow sill at its narrow mouth, which limits water exchange of the fjord's basin...... water. The water in the basin is exchanged only every 3 to 5 years and the water below sill level is anoxic or sulfidic between water renewals. Five sites were examined in the By Fjord; three shallow sites above the sill level with oxic bottom waters and two deeper sites with anoxic bottom waters...... anoxic site were also examined in the adjacent Koljo Fjord having similar characteristics as the By Fjord. In situ measurements of benthic fluxes of dissolved inorganic phosphorus (DIP) showed that the fluxes from sediments with oxic overlying water (0.05-0.23 mmol m(-2) d(-1)) were much lower than...

  13. Sulfur Isotope Exchange between S-35 Labeled Inorganic Sulfur-Compounds in Anoxic Marine-Sediments

    DEFF Research Database (Denmark)

    FOSSING, H.; THODEANDERSEN, S.; JØRGENSEN, BB

    1992-01-01

    Isotope exchange reactions between S-35-labeled sulfur compounds were studied in anoxic estuarine sediment slurries at 21-degrees-C and pH 7.4-7.7. Two experiments labeled with radioactive elemental sulfur (S-35-degrees) and one labeled with radioactive sulfate ((SO42-)-S-35) were performed as time......% of the total S-35 was recovered in the SIGMA-HS- pool in less than 1.5 h. With no detectable SIGMA-HS- (less than 1-mu-M) in the slurry, 58% of the total S-35 was observed in the pyrite pool within 1.5 h. The FeS pool received up to 31% of all S-35 added. The rapid S-35 incorporation from S-35-degrees...... into SIGMA-HS- and FeS pools was explained by isotope exchange reactions. In contrast, there was evidence that the radioactivity observed in the 'pyrite pool' was caused by adhesion of the added S-35-degrees to the FeS2 grains. In all S-35-degrees-labeled experiments we also observed oxidation...

  14. Culture-dependent and independent studies of microbial diversity in highly copper-contaminated Chilean marine sediments.

    Science.gov (United States)

    Besaury, Ludovic; Marty, Florence; Buquet, Sylvaine; Mesnage, Valérie; Muyzer, Gerard; Quillet, Laurent

    2013-02-01

    Cultivation and molecular-based approaches were used to study microbial diversity in two Chilean marine sediments contaminated with high (835 ppm) and very high concentrations of copper (1,533 ppm). The diversity of cultivable bacteria resistant to copper was studied at oxic and anoxic conditions, focusing on sulfate-, thiosulfate-, and iron-reducing bacteria. For both sediments, the cultivable bacteria isolated at oxic conditions were mostly affiliated to the genus Bacillus, while at anoxic conditions the majority of the cultivable bacteria found were closely related to members of the genera Desulfovibrio, Sphingomonas, and Virgibacillus. Copper resistance was between 100 and 400 ppm, with the exception of a strain affiliated to members of the genus Desulfuromonas, which was resistant up to 1,000 ppm of copper. In parallel, cloning and sequencing of 16S rRNA was performed to study the total bacterial diversity in the sediments. A weak correlation was observed between the isolated strains and the 16S rRNA operational taxonomic units detected. The presence of copper resistance genes (copA, cusA, and pcoA) was tested for all the strains isolated; only copA was detected in a few isolates, suggesting that other copper resistance mechanisms could be used by the bacteria in those highly copper-contaminated sediments.

  15. Increased carbon uptake in marine sediment enabled by naturally occurring electrical conductors

    Science.gov (United States)

    Nielsen, M. E.; Cahoon, D. P.; Girguis, P. R.

    2011-12-01

    Reduction-oxidation (redox) gradients are common across marine sediment-water interfaces and result from microbially-mediated reactions such as the oxidation of organic matter coupled to reduction of electron acceptors. Most microbes living in sediments do not have direct access to oxygen in their immediate environment, however it has recently been shown that sulfide-oxidizing microbes may employ extracellular electron transfer (EET) to couple the oxidation of sulfide in the anoxic zone to reduction of oxygen at the sediment-water interface located several centimeters away. However, no mechanisms for this observed phenomenon have been validated. Accordingly, we tested the hypothesis that conductive minerals in marine sediment (specifically pyrite) can couple spatially separated redox reactions such as anaerobic respiration and oxygen reduction. Marine sediment was amended with naturally occurring pyrite in varying concentrations (0, 2, 10 and 50 weight-percent) and then incubated with 10 μM 13C-labeled acetate. After six hours, the treatments with the greatest amount of added pyrite showed the greatest incorporation of acetate from the labeled pool. The fraction of labeled acetate incorporation more than doubled in the 10 and 50 weight-percent treatments compared to the control sediment. We also designed a circuit to investigate the electrical conductivity of the sediment treatments as a function of added pyrite. A potentiostat was used to establish a known voltage across a sediment column and current was measured. Resistance (the inverse of conductance) was calculated from a linear fit of current data over a range of voltages ranging from 0.5 to 1.0 V. The treatments with added pyrite had lower resistance than background sediment, with the lowest resistance corresponding to the 50% pyrite treatment. We also examined the effect of varying pyrite content on microbial community composition using massively parallel 16S rRNA sequencing. Microbial community analyses

  16. Anaerobic degradation of cyclohexane by sulfate-reducing bacteria from hydrocarbon-contaminated marine sediments

    Directory of Open Access Journals (Sweden)

    Ulrike eJaekel

    2015-02-01

    Full Text Available The fate of cyclohexane, often used as a model compound for the biodegradation of cyclic alkanes due to its abundance in crude oils, in anoxic marine sediments has been poorly investigated. In the present study, we obtained an enrichment culture of cyclohexane-degrading sulfate-reducing bacteria from hydrocarbon-contaminated intertidal marine sediments. Microscopic analyses showed an apparent dominance by oval cells of 1.5×0.8 m. Analysis of a 16S rRNA gene library, followed by whole-cell hybridization with group- and sequence-specific oligonucleotide probes showed that these cells belonged to a single phylotype, and were accounting for more than 80% of the total cell number. The dominant phylotype, affiliated with the Desulfosarcina-Desulfococcus cluster of the Deltaproteobacteria, is proposed to be responsible for the degradation of cyclohexane. Quantitative growth experiments showed that cyclohexane degradation was coupled with the stoichiometric reduction of sulfate to sulfide. Substrate response tests corroborated with hybridization with a sequence-specific oligonucleotide probe suggested that the dominant phylotype apparently was able to degrade other cyclic and n-alkanes, including the gaseous alkanes propane and n-butane. Based on GC-MS analyses of culture extracts cyclohexylsuccinate was identified as a metabolite, indicating an activation of cyclohexane by addition to fumarate. Other metabolites detected were 3-cyclohexylpropionate and cyclohexanecarboxylate providing evidence that the overall degradation pathway of cyclohexane under anoxic conditions is analogous to that of n-alkanes.

  17. Partition of iodine (129I and 127I) isotopes in soils and marine sediments

    DEFF Research Database (Denmark)

    Hansen, Violeta; Roos, Per; Aldahan, Ala

    2011-01-01

    Natural organic matter, such as humic and fulvic acids and humin, plays a key role in determining the fate and mobility of radioiodine in soil and sediments. The radioisotope 129I is continuously produced and released from nuclear fuel reprocessing plants, and as a biophilic element, its......–60% of the total 129I are associated with organic matter in soil and sediment samples. At a soil/sediment pH below 5.0–5.5, 127I and 129I in the organic fraction associate primarily with the humic acid while at soil/sediment pH > 6 129I was mostly found to be bound to fulvic acid. Anoxic conditions seem...... environmental mobility is strongly linked to organic matter. Due to its long half-life (15.7 million years), 129I builds up in the environment and can be traced since the beginning of the nuclear era in reservoirs such as soils and marine sediments. Nevertheless, partition of the isotope between the different...

  18. Unexpected and novel putative viruses in the sediments of a deep-dark permanently anoxic freshwater habitat

    OpenAIRE

    Borrel, Guillaume; Colombet, Jonathan; Robin, Agnès; Lehours, Anne-Catherine; Prangishvili, David; Sime-Ngando, Télesphore

    2012-01-01

    Morphological diversity, abundance and community structure of viruses were examined in the deep and anoxic sediments of the volcanic Lake Pavin (France). The sediment core, encompassing 130 years of sedimentation, was subsampled every centimeter. High viral abundances were recorded and correlated to prokaryotic densities. Abundances of viruses and prokaryotes decreased with the depth, contrasting the pattern of virus-to-prokaryote ratio. According to fingerprint analyses, the community struct...

  19. Microbial colonization and degradation of polyethylene and biodegradable plastic bags in temperate fine-grained organic-rich marine sediments.

    Science.gov (United States)

    Nauendorf, Alice; Krause, Stefan; Bigalke, Nikolaus K; Gorb, Elena V; Gorb, Stanislav N; Haeckel, Matthias; Wahl, Martin; Treude, Tina

    2016-02-15

    To date, the longevity of plastic litter at the sea floor is poorly constrained. The present study compares colonization and biodegradation of plastic bags by aerobic and anaerobic benthic microbes in temperate fine-grained organic-rich marine sediments. Samples of polyethylene and biodegradable plastic carrier bags were incubated in natural oxic and anoxic sediments from Eckernförde Bay (Western Baltic Sea) for 98 days. Analyses included (1) microbial colonization rates on the bags, (2) examination of the surface structure, wettability, and chemistry, and (3) mass loss of the samples during incubation. On average, biodegradable plastic bags were colonized five times higher by aerobic and eight times higher by anaerobic microbes than polyethylene bags. Both types of bags showed no sign of biodegradation during this study. Therefore, marine sediment in temperate coastal zones may represent a long-term sink for plastic litter and also supposedly compostable material. Copyright © 2016 Elsevier Ltd. All rights reserved.

  20. Studies of anoxiC conditions in Framvaren fjord, Gullmaren fjord and Byfjorden and of mixing between seawater and freshwater at the Kalix river and estuary

    International Nuclear Information System (INIS)

    Roos, P.

    2001-01-01

    The sediments in the anoxic Framvaren fjord acts as a source for actinides to the overlaying water column. The remobilisation process is most likely linked to early diagenetic alteration of the marine organic material in the sediments. This is indicated by the close correlation between Pu, Am and dissolved organic carbon depth profiles in the water column. Speciation studies of the plutonium and americium in the water column shows that both to a large degree are associated to colloidal material in the size range 0.01-0.45 μm. Less than 2% is retained by a 0.45 μm filter which is reflected in the low K D -values obtained of about 20 000, which is at least a factor of 10 lower than in typical coastal waters. It is also proven that the plutonium exist almost entirely in the trivalent state in the anoxic water column. This study is the first ever to show extensive remobilisation of plutonium and americium from sediments in anoxic marine basins. Similar remobilisation from sediments most likely occur in other anoxic marine waters where early diagenesis results in humic and fulvic acid production. Although the remobilised actinides in the Framvaren fjord at present don't pose any radiological hazard due to the lack of fish in anoxic waters, it is of great concern to identify processes involved in the remobilisation of actinides from anoxic sediments as such sediments likely will be a major source for actinides in the Baltic Sea and other oxygen sensitive basins in the long term perspective. In such basins the remobilised plutonium may reach oxygenated and biological productive waters by convection. Results from the temporarily oxygen deficient Gullmaren fjord on the Swedish west coast shows that remobilisation from sediments can not be identified during short (a few months) periods of oxygen deficient water. The rapid bioturbation (quantified by tracer studies) in this fjord results in that sedimenting organic material rapidly is buried and distributed within the upper

  1. Studies of anoxiC conditions in Framvaren fjord, Gullmaren fjord and Byfjorden and of mixing between seawater and freshwater at the Kalix river and estuary

    Energy Technology Data Exchange (ETDEWEB)

    Roos, P. [Univ. of Lund, Lund (Sweden)

    2001-04-01

    The sediments in the anoxic Framvaren fjord acts as a source for actinides to the overlaying water column. The remobilisation process is most likely linked to early diagenetic alteration of the marine organic material in the sediments. This is indicated by the close correlation between Pu, Am and dissolved organic carbon depth profiles in the water column. Speciation studies of the plutonium and americium in the water column shows that both to a large degree are associated to colloidal material in the size range 0.01-0.45 {mu}m. Less than 2% is retained by a 0.45 {mu}m filter which is reflected in the low K{sub D}-values obtained of about 20 000, which is at least a factor of 10 lower than in typical coastal waters. It is also proven that the plutonium exist almost entirely in the trivalent state in the anoxic water column. This study is the first ever to show extensive remobilisation of plutonium and americium from sediments in anoxic marine basins. Similar remobilisation from sediments most likely occur in other anoxic marine waters where early diagenesis results in humic and fulvic acid production. Although the remobilised actinides in the Framvaren fjord at present don't pose any radiological hazard due to the lack of fish in anoxic waters, it is of great concern to identify processes involved in the remobilisation of actinides from anoxic sediments as such sediments likely will be a major source for actinides in the Baltic Sea and other oxygen sensitive basins in the long term perspective. In such basins the remobilised plutonium may reach oxygenated and biological productive waters by convection. Results from the temporarily oxygen deficient Gullmaren fjord on the Swedish west coast shows that remobilisation from sediments can not be identified during short (a few months) periods of oxygen deficient water. The rapid bioturbation (quantified by tracer studies) in this fjord results in that sedimenting organic material rapidly is buried and distributed

  2. Nonlinear acoustics of water-saturated marine sediments

    DEFF Research Database (Denmark)

    Jensen, Leif Bjørnø

    1976-01-01

    Interest in the acoustic qualities of water-saturated marine sediments has increased considerably during recent years. The use of sources of high-intensity sound in oil propsecting, in geophysical and geological studies of bottom and subbottom materials and profiles and recently in marine...... archaeology has emphasized the need of information about the nonlinear acoustic qualities of water-saturated marine sediments. While the acoustic experiments and theoretical investigations hitherto performed have concentrated on a determination of the linear acoustic qualities of water-saturated marine...... sediments, their parameters of nonlinear acoustics are still unexplored. The strong absorption, increasing about linearly with frequency, found in most marine sediments and the occurrence of velocity dispersion by some marine sediments restrict the number of nonlinear acoustic test methods traditionally...

  3. Cable Bacteria in Freshwater Sediments

    DEFF Research Database (Denmark)

    Risgaard-Petersen, Nils; Kristiansen, Michael; Frederiksen, Rasmus

    2015-01-01

    In marine sediments cathodic oxygen reduction at the sediment surface can be coupled to anodic sulfide oxidation in deeper anoxic layers through electrical currents mediated by filamentous, multicellular bacteria of the Desulfobulbaceae family, the so-called cable bacteria. Until now, cable...... bacteria have only been reported from marine environments. In this study, we demonstrate that cable bacteria also occur in freshwater sediments. In a first step, homogenized sediment collected from the freshwater stream Giber Å, Denmark, was incubated in the laboratory. After 2 weeks, pH signatures...... marine cable bacteria, with the genus Desulfobulbus as the closest cultured lineage. The results of the present study indicate that electric currents mediated by cable bacteria could be important for the biogeochemistry in many more environments than anticipated thus far and suggest a common evolutionary...

  4. Organic carbon degradation in arctic marine sediments, Svalbard: A comparison of initial and terminal steps

    DEFF Research Database (Denmark)

    Arnosti, C.; Jørgensen, BB

    2006-01-01

    carbohydrate concentrations were comparable to those measured in more temperate sediments, and likely comprise a considerable fraction of porewater dissolved organic carbon. A comparison of dissolved carbohydrate inventories with hydrolysis and sulfate reduction rates suggests that the turnover of carbon......Degradation of marine organic matter under anoxic conditions involves microbial communities working in concert to remineralize complex substrates to CO2. In order to investigate the coupling between the initial and terminal steps of this sequence in permanently cold sediments, rates...... of extracellular enzymatic hydrolysis and sulfate reduction were measured in parallel cores collected from 5 fjords on the west and northwest coast of Svalbard, in the high Arctic. Inventories of total dissolved carbohydrates were also measured in order to evaluate their potential role in carbon turnover...

  5. Bioturbation: impact on the marine nitrogen cycle.

    Science.gov (United States)

    Laverock, Bonnie; Gilbert, Jack A; Tait, Karen; Osborn, A Mark; Widdicombe, Steve

    2011-01-01

    Sediments play a key role in the marine nitrogen cycle and can act either as a source or a sink of biologically available (fixed) nitrogen. This cycling is driven by a number of microbial remineralization reactions, many of which occur across the oxic/anoxic interface near the sediment surface. The presence and activity of large burrowing macrofauna (bioturbators) in the sediment can significantly affect these microbial processes by altering the physicochemical properties of the sediment. For example, the building and irrigation of burrows by bioturbators introduces fresh oxygenated water into deeper sediment layers and allows the exchange of solutes between the sediment and water column. Burrows can effectively extend the oxic/anoxic interface into deeper sediment layers, thus providing a unique environment for nitrogen-cycling microbial communities. Recent studies have shown that the abundance and diversity of micro-organisms can be far greater in burrow wall sediment than in the surrounding surface or subsurface sediment; meanwhile, bioturbated sediment supports higher rates of coupled nitrification-denitrification reactions and increased fluxes of ammonium to the water column. In the present paper we discuss the potential for bioturbation to significantly affect marine nitrogen cycling, as well as the molecular techniques used to study microbial nitrogen cycling communities and directions for future study.

  6. Paleoclimatic and paleoceanographic studies of estuarine and marine sediments using strontium isotopes

    International Nuclear Information System (INIS)

    Ingram, B.L.

    1992-01-01

    Strontium isotopic ratio ( 87 Sr/ 86 Sr) measurements in fossil carbonates and phosphates are used to evaluate paleoceanographic and paleoclimatic environments in Quaternary, Pliocene-Pleistocene, and mid-Cretaceous estuarine and marine sediments. The use of 87 Sr/ 86 Sr measurements as an estuarine paleosalinity and paleoclimatic indicator is developed and applied to San Francisco Bay. 87 Sr/ 86 Sr measurements of foraminifer and molluscan fossils contained in estuarine sediments of late Pleistocene (ca 115 to 125 ka) and late Holocene (4.5 ka) age show cyclic variations indicating that salinity fluctuated with periods of several hundred years, probably reflecting wet-dry cycles associated with fluctuations in solar irradiance caused by sunspot cycles. The average salinity in San Pablo and Richardson bays was significantly lower (by 6 to 8%) over much of the past 4.5 ka than at present, reflecting a combination of decreased freshwater inflow at present associated with water diversion and wetter climatic conditions prior to 2000 years ago. Salinity data are converted to river discharge using salinity-delta flow relations derived from historical records for San Francisco Bay. The data indicate that annual freshwater inflow was at least twice the modern pre-diversion average between 2.5 and 3.0 Ka; this time period is also identified as one of wetter climatic conditions by lake level and treeline records from the Sierra Nevada. Strontium isotopic measurements of marine carbonate and fish teeth to middle Cretaceous age are used to increase the resolution of the existing seawater Sr isotope versus time curve and to assess models for global oceanic anoxic events. The new data using fish teeth show less scatter and variability than previous data. Negative excursions in the 87 Sr/ 86 Sr ratio of 7-14 parts in 10 -5 during Aptian anoxic events suggest a link between increased submarine volcanism and oceanic anoxia

  7. Diffusive Gradients in Thin Films Reveals Differences in Antimony and Arsenic Mobility in a Contaminated Wetland Sediment during an Oxic-Anoxic Transition.

    Science.gov (United States)

    Arsic, Maja; Teasdale, Peter R; Welsh, David T; Johnston, Scott G; Burton, Edward D; Hockmann, Kerstin; Bennett, William W

    2018-02-06

    Antimony (Sb) and arsenic (As) are priority environmental contaminants that often co-occur at mining-impacted sites. Despite their chemical similarities, Sb mobility in waterlogged sediments is poorly understood in comparison to As, particularly across the sediment-water interface (SWI) where changes can occur at the millimeter scale. Combined diffusive gradients in thin films (DGT) and diffusive equilibration in thin films (DET) techniques provided a high resolution, in situ comparison between Sb, As, and iron (Fe) speciation and mobility across the SWI in contaminated freshwater wetland sediment mesocosms under an oxic-anoxic-oxic transition. The shift to anoxic conditions released Fe(II), As(III), and As(V) from the sediment to the water column, consistent with As release being coupled to the reductive dissolution of iron(III) (hydr)oxides. Conversely, Sb(III) and Sb(V) effluxed to the water column under oxic conditions and fluxed into the sediment under anoxic conditions. Porewater DGT-DET depth profiles showed apparent decoupling between Fe(II) and Sb release, as Sb was primarily mobilized across the SWI under oxic conditions. Solid-phase X-ray absorption spectroscopy (XAS) revealed the presence of an Sb(III)-S phase in the sediment that increased in proportion with depth and the transition from oxic to anoxic conditions. The results of this study showed that Sb mobilization was decoupled from the Fe cycle and was, therefore, more likely linked to sulfur and/or organic carbon (e.g., most likely authigenic antimony sulfide formation or Sb(III) complexation by reduced organic sulfur functional groups).

  8. Archaeal and bacterial communities respond differently to environmental gradients in anoxic sediments of a California hypersaline lake, the Salton Sea.

    Science.gov (United States)

    Swan, Brandon K; Ehrhardt, Christopher J; Reifel, Kristen M; Moreno, Lilliana I; Valentine, David L

    2010-02-01

    Sulfidic, anoxic sediments of the moderately hypersaline Salton Sea contain gradients in salinity and carbon that potentially structure the sedimentary microbial community. We investigated the abundance, community structure, and diversity of Bacteria and Archaea along these gradients to further distinguish the ecologies of these domains outside their established physiological range. Quantitative PCR was used to enumerate 16S rRNA gene abundances of Bacteria, Archaea, and Crenarchaeota. Community structure and diversity were evaluated by terminal restriction fragment length polymorphism (T-RFLP), quantitative analysis of gene (16S rRNA) frequencies of dominant microorganisms, and cloning and sequencing of 16S rRNA. Archaea were numerically dominant at all depths and exhibited a lesser response to environmental gradients than that of Bacteria. The relative abundance of Crenarchaeota was low (0.4 to 22%) at all depths but increased with decreased carbon content and increased salinity. Salinity structured the bacterial community but exerted no significant control on archaeal community structure, which was weakly correlated with total carbon. Partial sequencing of archaeal 16S rRNA genes retrieved from three sediment depths revealed diverse communities of Euryarchaeota and Crenarchaeota, many of which were affiliated with groups previously described from marine sediments. The abundance of these groups across all depths suggests that many putative marine archaeal groups can tolerate elevated salinity (5.0 to 11.8% [wt/vol]) and persist under the anaerobic conditions present in Salton Sea sediments. The differential response of archaeal and bacterial communities to salinity and carbon patterns is consistent with the hypothesis that adaptations to energy stress and availability distinguish the ecologies of these domains.

  9. Three manganese oxide-rich marine sediments harbor similar communities of acetate-oxidizing manganese-reducing bacteria.

    Science.gov (United States)

    Vandieken, Verona; Pester, Michael; Finke, Niko; Hyun, Jung-Ho; Friedrich, Michael W; Loy, Alexander; Thamdrup, Bo

    2012-11-01

    Dissimilatory manganese reduction dominates anaerobic carbon oxidation in marine sediments with high manganese oxide concentrations, but the microorganisms responsible for this process are largely unknown. In this study, the acetate-utilizing manganese-reducing microbiota in geographically well-separated, manganese oxide-rich sediments from Gullmar Fjord (Sweden), Skagerrak (Norway) and Ulleung Basin (Korea) were analyzed by 16S rRNA-stable isotope probing (SIP). Manganese reduction was the prevailing terminal electron-accepting process in anoxic incubations of surface sediments, and even the addition of acetate stimulated neither iron nor sulfate reduction. The three geographically distinct sediments harbored surprisingly similar communities of acetate-utilizing manganese-reducing bacteria: 16S rRNA of members of the genera Colwellia and Arcobacter and of novel genera within the Oceanospirillaceae and Alteromonadales were detected in heavy RNA-SIP fractions from these three sediments. Most probable number (MPN) analysis yielded up to 10(6) acetate-utilizing manganese-reducing cells cm(-3) in Gullmar Fjord sediment. A 16S rRNA gene clone library that was established from the highest MPN dilutions was dominated by sequences of Colwellia and Arcobacter species and members of the Oceanospirillaceae, supporting the obtained RNA-SIP results. In conclusion, these findings strongly suggest that (i) acetate-dependent manganese reduction in manganese oxide-rich sediments is catalyzed by members of taxa (Arcobacter, Colwellia and Oceanospirillaceae) previously not known to possess this physiological function, (ii) similar acetate-utilizing manganese reducers thrive in geographically distinct regions and (iii) the identified manganese reducers differ greatly from the extensively explored iron reducers in marine sediments.

  10. Uranium isotope evidence for two episodes of deoxygenation during Oceanic Anoxic Event 2

    Science.gov (United States)

    Clarkson, Matthew O.; Stirling, Claudine H.; Jenkyns, Hugh C.; Dickson, Alexander J.; Porcelli, Don; Moy, Christopher M.; Pogge von Strandmann, Philip A. E.; Cooke, Ilsa R.; Lenton, Timothy M.

    2018-03-01

    Oceanic Anoxic Event 2 (OAE 2), occurring ˜94 million years ago, was one of the most extreme carbon cycle and climatic perturbations of the Phanerozoic Eon. It was typified by a rapid rise in atmospheric CO2, global warming, and marine anoxia, leading to the widespread devastation of marine ecosystems. However, the precise timing and extent to which oceanic anoxic conditions expanded during OAE 2 remains unresolved. We present a record of global ocean redox changes during OAE 2 using a combined geochemical and carbon cycle modeling approach. We utilize a continuous, high-resolution record of uranium isotopes in pelagic and platform carbonate sediments to quantify the global extent of seafloor anoxia during OAE 2. This dataset is then compared with a dynamic model of the coupled global carbon, phosphorus, and uranium cycles to test hypotheses for OAE 2 initiation. This unique approach highlights an intra-OAE complexity that has previously been underconstrained, characterized by two expansions of anoxia separated by an episode of globally significant reoxygenation coincident with the “Plenus Cold Event.” Each anoxic expansion event was likely driven by rapid atmospheric CO2 injections from multiphase Large Igneous Province activity.

  11. Stable carbon isotope response to oceanic anoxic events

    International Nuclear Information System (INIS)

    Hu Xiumian; Wang Chengshan; Li Xianghui

    2001-01-01

    Based on discussion of isotope compositions and fractionation of marine carbonate and organic carbon, the author studies the relationship between oceanic anoxic events and changes in the carbon isotope fractionation of both carbonate and organic matter. During the oceanic anoxic events, a great number of organisms were rapidly buried, which caused a kind of anoxic conditions by their decomposition consuming dissolved oxygen. Since 12 C-rich organism preserved, atmosphere-ocean system will enrich relatively of 13 C. As a result, simultaneous marine carbonate will record the positive excursion of carbon isotope. There is a distinctive δ 13 C excursion during oceanic anoxic events in the world throughout the geological time. In the Cenomanian-Turonian anoxic event. this positive excursion arrived at ∼0.2% of marine carbonate and at ∼0.4% of organic matter, respectively. Variations in the carbon isotopic compositions of marine carbonate and organic carbon record the changes in the fraction of organic carbon buried throughout the geological time and may provide clues to the changes in rates of weathering and burial of organic carbon. This will provide a possibility of interpreting not only the changes in the global carbon cycle throughout the geological time, but also that in atmospheric p CO 2

  12. Chemistry of marine sediments

    International Nuclear Information System (INIS)

    Yen, T.F.

    1977-01-01

    Some topics considered are as follows: characterization of sediments in the vicinity of offshore petroleum production; thermal alteration experiments on organic matter in recent marine sediments as a model for petroleum genesis; composition of polluted bottom sediments in Great Lakes harbors; distribution of heavy metals in sediment fractions; recent deposition of lead off the coast of southern California; release of trace constituents from sediments resuspended during dredging operations; and migration of chemical constituents in sediment-seawater interfaces

  13. Electricity generation by anaerobic bacteria and anoxic sediments from hypersaline soda lakes

    Science.gov (United States)

    Miller, L.G.; Oremland, R.S.

    2008-01-01

    Anaerobic bacteria and anoxic sediments from soda lakes produced electricity in microbial fuel cells (MFCs). No electricity was generated in the absence of bacterial metabolism. Arsenate respiring bacteria isolated from moderately hypersaline Mono Lake (Bacillus selenitireducens), and salt-saturated Searles Lake, CA (strain SLAS-1) oxidized lactate using arsenate as the electron acceptor. However, these cultures grew equally well without added arsenate using the MFC anode as their electron acceptor, and in the process oxidized lactate more efficiently. The decrease in electricity generation by consumption of added alternative electron acceptors (i.e. arsenate) which competed with the anode for available electrons proved to be a useful indicator of microbial activity and hence life in the fuel cells. Shaken sediment slurries from these two lakes also generated electricity, with or without added lactate. Hydrogen added to sediment slurries was consumed but did not stimulate electricity production. Finally, electricity was generated in statically incubated "intact" sediment cores from these lakes. More power was produced in sediment from Mono Lake than from Searles Lake, however microbial fuel cells could detect low levels of metabolism operating under moderate and extreme conditions of salt stress. ?? 2008 US Government.

  14. Organotin persistence in contaminated marine sediments and porewaters: In situ degradation study using species-specific stable isotopic tracers

    Energy Technology Data Exchange (ETDEWEB)

    Furdek, Martina; Mikac, Nevenka [Division for Marine and Environmental Research, Rudjer Boskovic Institute, Bijenicka 54, Zagreb (Croatia); Bueno, Maite; Tessier, Emmanuel; Cavalheiro, Joana [Laboratoire de Chimie Analytique Bio-inorganique et Environnement, Institut Pluridisciplinaire de Recherche sur l’Environnement et les Matériaux, CNRS UMR 5254, Université de Pau et des Pays de l’Adour, Hélioparc Pau Pyrénées, 2, Av. P. Angot, 64053 Pau Cedex 9 (France); Monperrus, Mathilde, E-mail: mathilde.monperrus@univ-pau.fr [Laboratoire de Chimie Analytique Bio-inorganique et Environnement, Institut Pluridisciplinaire de Recherche sur l’Environnement et les Matériaux, CNRS UMR 5254, Université de Pau et des Pays de l’Adour, Hélioparc Pau Pyrénées, 2, Av. P. Angot, 64053 Pau Cedex 9 (France)

    2016-04-15

    Highlights: • Limiting step in OTC degradation in sediments is their desorption into porewater. • TBT persistence in contaminated sediments increases in sediments rich in organic matter. • DBT does not accumulate in sediments as degradation product of TBT. • TBT and DBT degradation in porewaters occurs with half-lives from 2.9 to 9.2 days. • PhTs degradation is slower than BuTs degradation in oxic porewaters. - Abstract: This paper provides a comprehensive study of the persistence of butyltins and phenyltins in contaminated marine sediments and presents the first data on their degradation potentials in porewaters. The study’s aim was to explain the different degradation efficiencies of organotin compounds (OTC) in contaminated sediments. The transformation processes of OTC in sediments and porewaters were investigated in a field experiment using species-specific, isotopically enriched organotin tracers. Sediment characteristics (organic carbon content and grain size) were determined to elucidate their influence on the degradation processes. The results of this study strongly suggest that a limiting step in OTC degradation in marine sediments is their desorption into porewaters because their degradation in porewaters occurs notably fast with half-lives of 9.2 days for tributyltin (TBT) in oxic porewaters and 2.9 ± 0.1 and 9.1 ± 0.9 days for dibutyltin (DBT) in oxic and anoxic porewaters, respectively. By controlling the desorption process, organic matter influences the TBT degradation efficiency and consequently defines its persistence in contaminated sediments, which thus increases in sediments rich in organic matter.

  15. Organotin persistence in contaminated marine sediments and porewaters: In situ degradation study using species-specific stable isotopic tracers

    International Nuclear Information System (INIS)

    Furdek, Martina; Mikac, Nevenka; Bueno, Maite; Tessier, Emmanuel; Cavalheiro, Joana; Monperrus, Mathilde

    2016-01-01

    Highlights: • Limiting step in OTC degradation in sediments is their desorption into porewater. • TBT persistence in contaminated sediments increases in sediments rich in organic matter. • DBT does not accumulate in sediments as degradation product of TBT. • TBT and DBT degradation in porewaters occurs with half-lives from 2.9 to 9.2 days. • PhTs degradation is slower than BuTs degradation in oxic porewaters. - Abstract: This paper provides a comprehensive study of the persistence of butyltins and phenyltins in contaminated marine sediments and presents the first data on their degradation potentials in porewaters. The study’s aim was to explain the different degradation efficiencies of organotin compounds (OTC) in contaminated sediments. The transformation processes of OTC in sediments and porewaters were investigated in a field experiment using species-specific, isotopically enriched organotin tracers. Sediment characteristics (organic carbon content and grain size) were determined to elucidate their influence on the degradation processes. The results of this study strongly suggest that a limiting step in OTC degradation in marine sediments is their desorption into porewaters because their degradation in porewaters occurs notably fast with half-lives of 9.2 days for tributyltin (TBT) in oxic porewaters and 2.9 ± 0.1 and 9.1 ± 0.9 days for dibutyltin (DBT) in oxic and anoxic porewaters, respectively. By controlling the desorption process, organic matter influences the TBT degradation efficiency and consequently defines its persistence in contaminated sediments, which thus increases in sediments rich in organic matter.

  16. A marine biogeochemical perspective on black shale deposition

    Science.gov (United States)

    Piper, D. Z.; Calvert, S. E.

    2009-06-01

    Deposition of marine black shales has commonly been interpreted as having involved a high level of marine phytoplankton production that promoted high settling rates of organic matter through the water column and high burial fluxes on the seafloor or anoxic (sulfidic) water-column conditions that led to high levels of preservation of deposited organic matter, or a combination of the two processes. Here we review the hydrography and the budgets of trace metals and phytoplankton nutrients in two modern marine basins that have permanently anoxic bottom waters. This information is then used to hindcast the hydrography and biogeochemical conditions of deposition of a black shale of Late Jurassic age (the Kimmeridge Clay Formation, Yorkshire, England) from its trace metal and organic carbon content. Comparison of the modern and Jurassic sediment compositions reveals that the rate of photic zone primary productivity in the Kimmeridge Sea, based on the accumulation rate of the marine fraction of Ni, was as high as 840 g organic carbon m - 2 yr -1. This high level was possibly tied to the maximum rise of sea level during the Late Jurassic that flooded this and other continents sufficiently to allow major open-ocean boundary currents to penetrate into epeiric seas. Sites of intense upwelling of nutrient-enriched seawater would have been transferred from the continental margins, their present location, onto the continents. This global flooding event was likely responsible for deposition of organic matter-enriched sediments in other marine basins of this age, several of which today host major petroleum source rocks. Bottom-water redox conditions in the Kimmeridge Sea, deduced from the V:Mo ratio in the marine fraction of the Kimmeridge Clay Formation, varied from oxic to anoxic, but were predominantly suboxic, or denitrifying. A high settling flux of organic matter, a result of the high primary productivity, supported a high rate of bacterial respiration that led to the

  17. Dynamic of sulphate-reducing microorganisms in petroleum-contaminated marine sediments inhabited by the polychaete Hediste diversicolor.

    Science.gov (United States)

    Stauffert, Magalie; Cravo-Laureau, Cristiana; Duran, Robert

    2015-10-01

    The behaviour of sulphate-reducing microbial community was investigated at the oxic-anoxic interface (0-2 cm) of marine sediments when submitted to oil and enhanced bioturbation activities by the addition of Hediste diversicolor. Although total hydrocarbon removal was not improved by the addition of H. diversicolor, terminal restriction fragment length polymorphism (T-RFLP) analyses based on dsrAB (dissimilatory sulphite reductase) genes and transcripts showed different patterns according to the presence of H. diversicolor which favoured the abundance of dsrB genes during the early stages of incubation. Complementary DNA (cDNA) dsrAB libraries revealed that in presence of H. diversicolor, most dsrAB sequences belonged to hydrocarbonoclastic Desulfobacteraceae, suggesting that sulphate-reducing microorganisms (SRMs) may play an active role in hydrocarbon biodegradation in sediments where the reworking activity is enhanced. Furthermore, the presence of dsrAB sequences related to sequences found associated to environments with high dinitrogen fixation activity suggested potential N2 fixation by SRMs in bioturbated-polluted sediments.

  18. Conspicuous veils formed by vibrioid bacteria on sulfidic marine sediment

    DEFF Research Database (Denmark)

    Thar, Roland Matthias; Kühl, Michael

    2002-01-01

    , but the bacteria have so far not been isolated in pure culture, and a detailed characterization of their metabolism is still lacking. The bacteria are colorless, gram-negative, and vibrioid-shaped (1.3- to 2.5- by 4- to 10-µm) cells that multiply by binary division and contain several spherical inclusions of poly......We describe the morphology and behavior of a hitherto unknown bacterial species that forms conspicuous veils (typical dimensions, 30 by 30 mm) on sulfidic marine sediment. The new bacteria were enriched on complex sulfidic medium within a benthic gradient chamber in oxygen-sulfide countergradients......, forming a cohesive whitish veil at the oxic-anoxic interface. Bacteria attached to the veil kept rotating and adapted their stalk lengths dynamically to changing oxygen concentrations. The joint action of rotating bacteria on the veil induced a homogeneous water flow from the oxic water region toward...

  19. An open ocean record of the Toarcian oceanic anoxic event

    Directory of Open Access Journals (Sweden)

    D. R. Gröcke

    2011-11-01

    Full Text Available Oceanic anoxic events were time intervals in the Mesozoic characterized by widespread distribution of marine organic matter-rich sediments (black shales and significant perturbations in the global carbon cycle. These perturbations are globally recorded in sediments as carbon isotope excursions irrespective of lithology and depositional environment. During the early Toarcian, black shales were deposited on the epi- and pericontinental shelves of Pangaea, and these sedimentary rocks are associated with a pronounced (ca. 7 ‰ negative (organic carbon isotope excursion (CIE which is thought to be the result of a major perturbation in the global carbon cycle. For this reason, the lower Toarcian is thought to represent an oceanic anoxic event (the T-OAE. If the T-OAE was indeed a global event, an isotopic expression of this event should be found beyond the epi- and pericontinental Pangaean localities. To address this issue, the carbon isotope composition of organic matter (δ13Corg of lower Toarcian organic matter-rich cherts from Japan, deposited in the open Panthalassa Ocean, was analysed. The results show the presence of a major (>6 ‰ negative excursion in δ13Corg that, based on radiolarian biostratigraphy, is a correlative of the lower Toarcian negative CIE known from Pangaean epi- and pericontinental strata. A smaller negative excursion in δ13Corg (ca. 2 ‰ is recognized lower in the studied succession. This excursion may, within the current biostratigraphic resolution, represent the excursion recorded in European epicontinental successions close to the Pliensbachian/Toarcian boundary. These results from the open ocean realm suggest, in conjunction with other previously published datasets, that these Early Jurassic carbon cycle perturbations affected the active global reservoirs of the exchangeable carbon cycle (deep marine, shallow marine, atmospheric.

  20. Linking metatranscriptomic to bioremediation processes of oil contaminated marine sediments

    Science.gov (United States)

    Cuny, P.; Atkinson, A.; Léa, S.; Guasco, S.; Jezequel, R.; Armougom, F.; Michotey, V.; Bonin, P.; Militon, C.

    2016-02-01

    Oil-derived hydrocarbons are one major source of pollution of marine ecosystems. In coastal marine areas they tend to accumulate in the sediment where they can impact the benthic communities. Oil hydrocarbons biodegradation by microorganisms is known to be one of the prevalent processes acting in the removal of these contaminants from sediments. The redox oscillation regimes generated by bioturbation, and the efficiency of metabolic coupling between functional groups associated to these specific redox regimes, are probably determinant factors controlling hydrocarbon biodegradation. Metatranscriptomic analysis appears like a promising approach to shed new light on the metabolic processes involved in the response of microbial communities to oil contamination in such oxic/anoxic oscillating environments. In the framework of the DECAPAGE project (ANR CESA-2011-006 01), funded by the French National Agency for Research, the metatranscriptomes (RNA-seq) of oil contaminated or not (Ural blend crude oil, 5 000 ppm) and bioturbated or not (addition of the common burrowing organism Hediste diversicolor, 1000 ind/m2) mudflat sediments, incubated in microcosms during 4 months at 19±1°C, were compared. The analysis of active microbial communities by SSU rRNA barcoding shows that the main observable changes are due to the presence of H. diversicolor. On the contrary, oil addition is the main factor explaining the observed changes in the genes expression patterns with 1949 genes specifically up or down-regulated (which is the case of only 245 genes when only H. diversicolor worms are added). In particular, the oil contamination leads to a marked overexpression (i) of benzyl- and alkylsuccinate synthase genes (ass and bss) that are involved in the anaerobic metabolism of aromatics (toluene) and alkanes, respectively and, (ii) of genes coding for nucleotide excision repair exonucleases indicating that DNA repair processes are also activated.

  1. Occurrence of Priming in the Degradation of Lignocellulose in Marine Sediments.

    Science.gov (United States)

    Gontikaki, Evangelia; Thornton, Barry; Cornulier, Thomas; Witte, Ursula

    2015-01-01

    More than 50% of terrestrially-derived organic carbon (terrOC) flux from the continents to the ocean is remineralised in the coastal zone despite its perceived high refractivity. The efficient degradation of terrOC in the marine environment could be fuelled by labile marine-derived material, a phenomenon known as "priming effect", but experimental data to confirm this mechanism are lacking. We tested this hypothesis by treating coastal sediments with 13C-lignocellulose, as a proxy for terrOC, with and without addition of unlabelled diatom detritus that served as the priming inducer. The occurrence of priming was assessed by the difference in lignocellulose mineralisation between diatom-amended treatments and controls in aerobic sediment slurries. Priming of lignocellulose degradation was observed only at the initial stages of the experiment (day 7) and coincided with overall high microbial activity as exemplified by total CO2 production. Lignocellulose mineralisation did not differ consistently between diatom treatments and control for the remaining experimental time (days 14-28). Based on this pattern, we hypothesize that the faster initiation of lignocellulose mineralisation in diatom-amended treatments is attributed to the decomposition of accessible polysaccharide components within the lignocellulose complex by activated diatom degraders. The fact that diatom-degraders contributed to lignocellulose degradation was also supported by the different patterns in 13C-enrichment of phospholipid fatty acids between treatments. Although we did not observe differences between treatments in the total quantity of respired lignocellulose at the end of the experiment, differences in timing could be important in natural ecosystems where the amount of time that a certain compound is subject to aerobic degradation before burial to deeper anoxic sediments may be limited.

  2. The impact of electrogenic sulfide oxidation on elemental cycling and solute fluxes in coastal sediment

    NARCIS (Netherlands)

    Rao, A.M.F.; Malkin, S.Y.; Hidalgo-Martinez, S.; Meysman, Filip

    2016-01-01

    Filamentous sulfide oxidizing cable bacteria are capable of linking the oxidation of free sulfide in deep anoxic layers of marine sediments to the reduction of oxygen or nitrate in surface sediments by conducting electrons over centimeter-scale distances. Previous studies have shown that this newly

  3. Biodegradation of crude oil in different types of marine sediment

    International Nuclear Information System (INIS)

    Hii, Y.S.; Law, A.T.

    1999-01-01

    An active oil-oxidizing bacterium, named Nap C was isolated from the sediment sample of Port Dickson coastal area for this study. Nap C is a gram negative, rod shape marine bacterium. It forms spore when the condition is not favorable. Three different types of treated marine sediment; sand, silt and clay were used in this study. The degradation of Malaysian Tapis A crude oil in the different types of marine sediment were assessed. Silt type of marine sediment was found to sustain highest biodegradation compared to clay type and sand type. 8.6.67% of the Malaysian Tapis A crude oil was degraded in silt type of marine sediment within 10 days of incubation. Where as there were only 60% and 73% of the Malaysian Tapis A crude oil was degraded in sand and clay type of marine sediment respectively. Microbial biomass estimation in the sediment was estimated by indirect phospholipid enumeration technique. (author)

  4. Mercury in dated Greenland marine sediments

    DEFF Research Database (Denmark)

    Asmund, G.; Nielsen, S.P.

    2000-01-01

    Twenty marine sediment cores from Greenland were analysed for mercury, and dated by the lead-210 method. In general the cores exhibit a mercury profile with higher mercury concentrations in the upper centimetres of the core. The cores were studied by linear regression of In Hg vs, age of the sedi......Twenty marine sediment cores from Greenland were analysed for mercury, and dated by the lead-210 method. In general the cores exhibit a mercury profile with higher mercury concentrations in the upper centimetres of the core. The cores were studied by linear regression of In Hg vs, age...... indicating that the mercury mainly originates from atmospheric washout. But the large variability indicates that other processes also influence the mercury flux to Arctic marine sediments. (C) 2000 Elsevier Science B.V. All rights reserved....

  5. Occurrence of Priming in the Degradation of Lignocellulose in Marine Sediments.

    Directory of Open Access Journals (Sweden)

    Evangelia Gontikaki

    Full Text Available More than 50% of terrestrially-derived organic carbon (terrOC flux from the continents to the ocean is remineralised in the coastal zone despite its perceived high refractivity. The efficient degradation of terrOC in the marine environment could be fuelled by labile marine-derived material, a phenomenon known as "priming effect", but experimental data to confirm this mechanism are lacking. We tested this hypothesis by treating coastal sediments with 13C-lignocellulose, as a proxy for terrOC, with and without addition of unlabelled diatom detritus that served as the priming inducer. The occurrence of priming was assessed by the difference in lignocellulose mineralisation between diatom-amended treatments and controls in aerobic sediment slurries. Priming of lignocellulose degradation was observed only at the initial stages of the experiment (day 7 and coincided with overall high microbial activity as exemplified by total CO2 production. Lignocellulose mineralisation did not differ consistently between diatom treatments and control for the remaining experimental time (days 14-28. Based on this pattern, we hypothesize that the faster initiation of lignocellulose mineralisation in diatom-amended treatments is attributed to the decomposition of accessible polysaccharide components within the lignocellulose complex by activated diatom degraders. The fact that diatom-degraders contributed to lignocellulose degradation was also supported by the different patterns in 13C-enrichment of phospholipid fatty acids between treatments. Although we did not observe differences between treatments in the total quantity of respired lignocellulose at the end of the experiment, differences in timing could be important in natural ecosystems where the amount of time that a certain compound is subject to aerobic degradation before burial to deeper anoxic sediments may be limited.

  6. The Tonian Beck Spring Dolomite: Marine dolomitization in a shallow, anoxic sea

    Science.gov (United States)

    Shuster, Alice Mary; Wallace, Malcolm William; van Smeerdijk Hood, Ashleigh; Jiang, Ganqing

    2018-06-01

    Zn in marine components compared to other Neoproterozoic carbonates suggest euxinic conditions (both anoxic and sulphidic) prevailed during deposition of the Beck Spring Dolomite.

  7. Metal impacts on microbial biomass in the anoxic sediments of a contaminated lake

    Energy Technology Data Exchange (ETDEWEB)

    Gough, Heidi L.; Dahl, Amy L.; Nolan, Melissa A.; Gaillard, Jean-Francois; Stahl, David A.

    2008-04-26

    Little is known about the long-term impacts of metal contamination on the microbiota of anoxic lake sediments. In this study, we examined microbial biomass and metals (arsenic, cadmium, chromium, copper, iron, lead, manganese, and zinc) in the sediments of Lake DePue, a backwater lake located near a former zinc smelter. Sediment core samples were examined using two independent measures for microbial biomass (total microscopic counts and total phospholipid-phosphate concentrations), and for various fractions of each metal (pore water extracts, sequential extractions, and total extracts of all studied metals and zinc speciation by X-ray absorption fine structure (XAFS). Zinc concentrations were up to 1000 times higher than reported for sediments in the adjacent Illinois River, and ranged from 21,400 mg/kg near the source to 1,680 mg/kg near the river. However, solid metal fractions were not well correlated with pore water concentrations, and were not good predictors of biomass concentrations. Instead, biomass, which varied among sites by as much as two-times, was inversely correlated with concentrations of pore water zinc and arsenic as established by multiple linear regression. Monitoring of other parameters known to naturally influence biomass in sediments (e.g., organic carbon concentrations, nitrogen concentrations, pH, sediment texture, and macrophytes) revealed no differences that could explain observed biomass trends. This study provides strong support for control of microbial abundance by pore water metal concentrations in contaminated freshwater sediments.

  8. Uranium and plutonium in marine sediments

    International Nuclear Information System (INIS)

    Ordonez R, E.; Almazan T, M. G.; Ruiz F, A. C.

    2011-11-01

    The marine sediments contain uranium concentrations that are considered normal, since the seawater contains dissolved natural uranium that is deposited in the bed sea in form of sediments by physical-chemistry and bio-genetics processes. Since the natural uranium is constituted of several isotopes, the analysis of the isotopic relationship 234 U/ 238 U are an indicator of the oceanic activity that goes accumulating slowly leaving a historical registration of the marine events through the profile of the marine soil. But the uranium is not the only radioelement present in the marine sediments. In the most superficial strata the presence of the 239+140 Pu has been detected that it is an alpha emitter and that recently it has been detected with more frequency in some coasts of the world. The Mexican coast has not been the exception to this phenomenon and in this work the presence of 239-140 Pu is shown in the more superficial layers of an exploring coming from the Gulf of Tehuantepec. (Author)

  9. The first metazoa living in permanently anoxic conditions

    Directory of Open Access Journals (Sweden)

    Heiner Iben

    2010-04-01

    Full Text Available Abstract Background Several unicellular organisms (prokaryotes and protozoa can live under permanently anoxic conditions. Although a few metazoans can survive temporarily in the absence of oxygen, it is believed that multi-cellular organisms cannot spend their entire life cycle without free oxygen. Deep seas include some of the most extreme ecosystems on Earth, such as the deep hypersaline anoxic basins of the Mediterranean Sea. These are permanently anoxic systems inhabited by a huge and partly unexplored microbial biodiversity. Results During the last ten years three oceanographic expeditions were conducted to search for the presence of living fauna in the sediments of the deep anoxic hypersaline L'Atalante basin (Mediterranean Sea. We report here that the sediments of the L'Atalante basin are inhabited by three species of the animal phylum Loricifera (Spinoloricus nov. sp., Rugiloricus nov. sp. and Pliciloricus nov. sp. new to science. Using radioactive tracers, biochemical analyses, quantitative X-ray microanalysis and infrared spectroscopy, scanning and transmission electron microscopy observations on ultra-sections, we provide evidence that these organisms are metabolically active and show specific adaptations to the extreme conditions of the deep basin, such as the lack of mitochondria, and a large number of hydrogenosome-like organelles, associated with endosymbiotic prokaryotes. Conclusions This is the first evidence of a metazoan life cycle that is spent entirely in permanently anoxic sediments. Our findings allow us also to conclude that these metazoans live under anoxic conditions through an obligate anaerobic metabolism that is similar to that demonstrated so far only for unicellular eukaryotes. The discovery of these life forms opens new perspectives for the study of metazoan life in habitats lacking molecular oxygen.

  10. Anaerobic nitrification–denitrification mediated by Mn-oxides in meso-tidal sediments: Implications for N2 and N2O production..

    Digital Repository Service at National Institute of Oceanography (India)

    Fernandes, S.O.; Javanaud, C.; Aigle, A.; Michotey, V.D.; Guasco, S.; Deborde, J.; Deflandre, B.; Anschutz, P.; Bonin, P.C.

    . Interactions between metal oxides and species of nitrogen and iodine in bioturbated marine sediments. Geochim. Cosmochim. Acta 64, 2751–2763. Bartlett, R., Mortimer, R.J.G., Morris, K.M., 2007. The biogeochemistry of a manganese-rich Scottish sea loch...: Implications for the study of anoxic nitrification. Cont. Shelf Res. 27, 1501–1509. Bartlett, R., Mortimer, R.J.G., Morris, K.M., 2008. Anoxic nitrification: Evidence from Humber Estuary sediments (UK). Chem. Geol. 250, 29–39. Baumann, P., Baumann, L., 1981...

  11. Matrix effects on organic pollutants analysis in marine sediment

    Science.gov (United States)

    Azis, M. Y.; Asia, L.; Piram, A.; Buchari, B.; Doumenq, P.; Setiyanto, H.

    2018-05-01

    Interference from the matrix sample can influence of the accurate analytical method. Accelerated Solvent Extraction and their purification methods were tried to separate the organic micropollutants respectively in marine sediment. Those matrix were as organic pollutants evaluation in marine environment. Polychlorinated Biphenyls (PCBs) and Organochlorine pesticides (OCPs) are two examples organic pollutant in environment which are carcinogenic and mutagenic. Marine sediments are important matrices of information regarding the human activities in coastal areas as well as the fate and behavior of organic pollutants, which are persistent in long-term. This research purpose to evaluate the matrice effect and the recovery from marine sediment spiking with several standar solution and deuterium of molecular target from organic pollutants in not polluted sample of sediment. Matrice samples was tested from indicate in unpolluted location. The methods were evaluated with standard calibration curve (linearity LOQ). Recovery (YE) relative, Matrice Effect (ME) relative correction with deuteriated standar were evaluated the interference the matrix. Interference effect for OCPs compounds were higher than PCBs in marine sediment.

  12. Long-distance electron transfer by cable bacteria in aquifer sediments

    DEFF Research Database (Denmark)

    Müller, Hubert; Bosch, Julian; Griebler, Christian

    2016-01-01

    recycling of sulfate by electron transfer over 1–2-cm distance. Sediments were taken from a hydrocarbon-contaminated aquifer, amended with iron sulfide and saturated with water, leaving the sediment surface exposed to air. Steep geochemical gradients developed in the upper 3 cm, showing a spatial separation...... recently been discovered in marine sediments to couple spatially separated redox half reactions over centimeter scales. Here we provide primary evidence that such sulfur-oxidizing cable bacteria can also be found at oxic–anoxic interfaces in aquifer sediments, where they provide a means for the direct...

  13. Factors Effecting Adsorption of 137 Cs in Marine Sediment Samples in Marine Sediment Samples from the Upper Gulf of Thailand

    International Nuclear Information System (INIS)

    Saengkul, C.; Sawangwong, P.; Pakkong, P.

    2014-01-01

    Contamination of 137 Cs in sediment is a far more serious problem than in water because sediment is a main transport factor of 137 Cs to the aquatic environmental. Most of 137 Cs in water could be accumulated in sediment which has direct effect to benthos. This study focused on factors effecting the adsorption of 137Cs in marine sediment samples collected from four different estuary sites to assess the transfer direction of 137 Cs from water to sediment that the study method by treat 137 Cs into seawater and mixed with different sediment samples for 4 days. The result indicated that properties of marine sediment (cation exchange capacity (CEC), organic matter, clay content, texture, type of clay mineral and size of soil particle) had effects on 137 Cs adsorption. CEC and clay content correlated positively with the accumulation of 137 Cs in the marine sediment samples. On the other hand, organic matter in sediment correlated negatively with the accumulation of 137 Cs in samples. The study of environmental effects (pH and potassium) found that the 137 Cs adsorption decreased when concentration of potassium increased. The pH effect is still unclear in this study because the differentiation of pH levels (6, 7, 8.3) did not have effects on 137 Cs adsorption in the samples.

  14. Isoprenoid quinones resolve the stratification of microbial redox processes in a biogeochemical continuum from the photic zone to deep anoxic sediments of the Black Sea.

    Science.gov (United States)

    Becker, Kevin W; Elling, Felix J; Schröder, Jan M; Lipp, Julius S; Goldhammer, Tobias; Zabel, Matthias; Elvert, Marcus; Overmann, Jörg; Hinrichs, Kai-Uwe

    2018-03-09

    The stratified water column of the Black Sea serves as a model ecosystem for studying the interactions of microorganisms with major biogeochemical cycles. Here we provide detailed analysis of isoprenoid quinones to study microbial redox processes in the ocean. In a continuum from the photic zone through the chemocline into deep anoxic sediments of the southern Black Sea, diagnostic quinones and inorganic geochemical parameters indicate niche segregation between redox processes and corresponding shifts in microbial community composition. Quinones specific for oxygenic photosynthesis and aerobic respiration dominate oxic waters, while quinones associated with thaumarchaeal ammonia-oxidation and bacterial methanotrophy, respectively, dominate a narrow interval in suboxic waters. Quinone distributions indicate highest metabolic diversity within the anoxic zone, with anoxygenic photosynthesis being a major process in its photic layer. In the dark anoxic layer, quinone profiles indicate occurrence of bacterial sulfur and nitrogen cycling, archaeal methanogenesis, and archaeal methanotrophy. Multiple novel ubiquinone isomers, possibly originating from unidentified intra-aerobic anaerobes, occur in this zone. The respiration modes found in the anoxic zone continue into shallow subsurface sediments, but quinone abundances rapidly decrease within the upper 50 cm below sea floor, reflecting the transition to lower energy availability. In the deep subseafloor sediments, quinone distributions and geochemical profiles indicate archaeal methanogenesis/methanotrophy and potentially bacterial fermentative metabolisms. We observed that sedimentary quinone distributions track lithology, which supports prior hypotheses that deep biosphere community composition and metabolisms are determined by environmental conditions during sediment deposition. Importance Microorganisms play crucial roles in global biogeochemical cycles. Yet, we have only a fragmentary understanding of the diversity

  15. Hundred years of genetic structure in a sediment revived diatom population

    DEFF Research Database (Denmark)

    Haernstroem, Karolina; Ellegaard, Marianne; Andersen, Thorbjørn Joest

    2011-01-01

    This paper presents research on the genetic structure and diversity of populations of a common marine protist and their changes over time. The bloom-forming diatom Skeletonema marinoi was used as a model organism. Strains were revived from anoxic discrete layers of a 210Pb-dated sediment core...

  16. Sediment impacts on marine sponges.

    Science.gov (United States)

    Bell, James J; McGrath, Emily; Biggerstaff, Andrew; Bates, Tracey; Bennett, Holly; Marlow, Joseph; Shaffer, Megan

    2015-05-15

    Changes in sediment input to marine systems can influence benthic environments in many ways. Sponges are important components of benthic ecosystems world-wide and as sessile suspension feeders are likely to be impacted by changes in sediment levels. Despite this, little is known about how sponges respond to changes in settled and suspended sediment. Here we review the known impacts of sedimentation on sponges and their adaptive capabilities, whilst highlighting gaps in our understanding of sediment impacts on sponges. Although the literature clearly shows that sponges are influenced by sediment in a variety of ways, most studies confer that sponges are able to tolerate, and in some cases thrive, in sedimented environments. Critical gaps exist in our understanding of the physiological responses of sponges to sediment, adaptive mechanisms, tolerance limits, and the particularly the effect of sediment on early life history stages. Copyright © 2015 Elsevier Ltd. All rights reserved.

  17. Nitrate-dependent iron oxidation limits iron transport in anoxic ocean regions

    Science.gov (United States)

    Scholz, Florian; Löscher, Carolin R.; Fiskal, Annika; Sommer, Stefan; Hensen, Christian; Lomnitz, Ulrike; Wuttig, Kathrin; Göttlicher, Jörg; Kossel, Elke; Steininger, Ralph; Canfield, Donald E.

    2016-11-01

    Iron is an essential element for life on Earth and limits primary production in large parts of the ocean. Oxygen-free continental margin sediments represent an important source of bioavailable iron to the ocean, yet little of the iron released from the seabed reaches the productive sea surface. Even in the anoxic water of oxygen minimum zones, where iron solubility should be enhanced, most of the iron is rapidly re-precipitated. To constrain the mechanism(s) of iron removal in anoxic ocean regions we explored the sediment and water in the oxygen minimum zone off Peru. During our sampling campaign the water column featured two distinct redox boundaries separating oxic from nitrate-reducing (i.e., nitrogenous) water and nitrogenous from weakly sulfidic water. The sulfidic water mass in contact with the shelf sediment contained elevated iron concentrations >300 nM. At the boundary between sulfidic and nitrogenous conditions, iron concentrations dropped sharply to <20 nM coincident with a maximum in particulate iron concentration. Within the iron gradient, we found an increased expression of the key functional marker gene for nitrate reduction (narG). Part of this upregulation was related to the activity of known iron-oxidizing bacteria. Collectively, our data suggest that iron oxidation and removal is induced by nitrate-reducing microbes, either enzymatically through anaerobic iron oxidation or by providing nitrite for an abiotic reaction. Given the important role that iron plays in nitrogen fixation, photosynthesis and respiration, nitrate-dependent iron oxidation likely represents a key-link between the marine biogeochemical cycles of nitrogen, oxygen and carbon.

  18. Microbial diversity and stratification of South Pacific abyssal marine sediments.

    Science.gov (United States)

    Durbin, Alan M; Teske, Andreas

    2011-12-01

    Abyssal marine sediments cover a large proportion of the ocean floor, but linkages between their microbial community structure and redox stratification have remained poorly constrained. This study compares the downcore gradients in microbial community composition to porewater oxygen and nitrate concentration profiles in an abyssal marine sediment column in the South Pacific Ocean. Archaeal 16S rRNA clone libraries showed a stratified archaeal community that changed from Marine Group I Archaea in the aerobic and nitrate-reducing upper sediment column towards deeply branching, uncultured crenarchaeotal and euryarchaeotal lineages in nitrate-depleted, anaerobic sediment horizons. Bacterial 16S rRNA clone libraries revealed a similar shift on the phylum and subphylum level within the bacteria, from a complex community of Alpha-, Gamma- and Deltaproteobacteria, Actinobacteria and Gemmatimonadetes in oxic surface sediments towards uncultured Chloroflexi and Planctomycetes in the anaerobic sediment column. The distinct stratification of largely uncultured bacterial and archaeal groups within the oxic and nitrate-reducing marine sediment column provides initial constraints for their microbial habitat preferences. © 2011 Society for Applied Microbiology and Blackwell Publishing Ltd.

  19. Convenient method of color measurement of marine sediments by colorimeter

    Energy Technology Data Exchange (ETDEWEB)

    Nagao, S [Japan Atomic Energy Research Inst., Ibaragi (Japan); Nakashima, S [Akita Univ., Akita (Japan). Research Inst. of Natural Resources

    1991-01-01

    Marine sediments exhibit various colors such as cream, gray, green, red, brown and black. Marine scientists conventionally judged colors of various types of marine sediments by visual observation which has several disadvantages. The purpose of the present study is to establish a color measurement method for various colors of dried marine sediments with the calorimeter and also to try a color measurement of wet core samples on board the ship. A colorimeter (Minolta Chroma Meter CR-200) was used to describe colors of wet and powdered sediment samples in L{sup *}a{sup *}b{sup *} values of the second CIE 1976 color space. Materials studied in this experiment for the color determination are from Japan sea(18 samples from 0-40.5 cm depth), East Pacific(21 samples from 0-42 cm depth) and Suruga Bay(23 samples from 0-110 cm depth), etc. As a result, the following conclusions have been derived : The sensitivity and accuracy of the method are reasonably satisfied for the color description of marine sediments; This method can be applied to shipboard color measurements of original wet sediments with careful consideration of variations of these parameters. 11 refs., 5 figs., 5 tabs.

  20. Evaluation of experimental studies on technetium transfers to sediments and benthic marine species, and comparison with in situ data

    Energy Technology Data Exchange (ETDEWEB)

    Aprosi, G [Electricite de France, 78 - Chatou; Masson, M [Commisariat a l' Energie Atomique, Institut de Protection et de Surete Nucleaire, 50 - Cherbourg (France)

    1984-01-01

    To obtain basic information for the evaluation of the radiological impact of technetium (Tc) on the marine environment, investigations are performed by different laboratories. Technetium is not a natural element and the main source of production is the nuclear fuel cycle. Under anoxic conditions, in presence of reducing sediments, the distribution coefficients are very high (Ksub(D)=10/sup 3/). Concentration factors from water to species are mostly very low (FC 1 to 10); however, concentration factors up to 1000 have been observed for a few species such as macrophytic brown algae, worms and lobster. Biochemical analysis shows that Tc is bound with protein. The transfer factors between sediment and species are very low (FT<0,5). The biological half-life (Tb) was determined in some marine organisms which had accumulated the radionuclide from water-contamined food or from sediments. The loss is biphasic in storage organs (liver and kidney); uptake in the edible parts is low. Among the parameters studied (light for algae, physico-chemical form of Tc, salinity and temperature) only light and the physico-chemical forms have an effect on the accumulation of technetium. Analyses of /sup 99/Tc concentrations in species collected near the La Hague and Windscale (Sellafield) reprocessing plants confirm the experimental studies. Since sea water is likely to be an oxidant environment, technetium appears as a conservative element.

  1. Design of a marine sediment trap and accessories

    Digital Repository Service at National Institute of Oceanography (India)

    Janakiraman, G.; Fernando, V.; Venkatesan, R.; Rajaraman, V.S.

    The marine sediment trap and the mooring accessories were developed indigenously and were used successfully for the collection of settling sediments in the Arabian Sea The experience gained in using sediment trap and further improvements...

  2. Dynamics of nitrification and denitrification in root- oxygenated sediments and adaptation of ammonia-oxidizing bacteria to low-oxygen or anoxic habitats

    NARCIS (Netherlands)

    Bodelier, P.L.E.; Libochant, J.A.; Blom, C.W.P.M.; Laanbroek, H.J.

    1996-01-01

    Oxygen-releasing plants may provide aerobic niches in anoxic sediments and soils for ammonia-oxidizing bacteria, The oxygen- releasing, aerenchymatous emergent macrophyte Glycerin maxima had a strong positive effect on numbers and activities of the nitrifying bacteria in its root zone in spring and

  3. Dynamics of nitrification and denitrification in root- oxygenated sediments and adaptation of ammonia-oxidizing bacteria to low-oxygen or anoxic habitats

    NARCIS (Netherlands)

    Bodelier, P.L.E.; Libochant, J.A.; Blom, C.W.P.M.; Laanbroek, H.J.

    1996-01-01

    Oxygen-releasing plants may provide aerobic niches in anoxic sediments and soils for ammonia-oxidizing bacteria. The oxygen-releasing, aerenchymatous emergent macrophyte Glyceria maxima had a strong positive effect on numbers and activities of the nitrifying bacteria in its root zone in spring and

  4. Microbial bioavailability regulates organic matter preservation in marine sediments

    NARCIS (Netherlands)

    Koho, K. A.; Nierop, K. G. J.; Moodley, L.; Middelburg, J. J.; Pozzato, L.; Soetaert, K.; van der Plicht, J.; Reichart, G-J.; Herndl, G.

    2013-01-01

    Burial of organic matter (OM) plays an important role in marine sediments, linking the short-term, biological carbon cycle with the long-term, geological subsurface cycle. It is well established that low-oxygen conditions promote organic carbon burial in marine sediments. However, the mechanism

  5. Evolutionary and geologic consequences of organic carbon fixing in the primitive anoxic ocean

    Science.gov (United States)

    Berry, W. B. N.; Wilde, P.

    1983-03-01

    Steps leading to development of the modern photic-based marine food web are postulated as the result of modifications of the environment, enhanced by the activity of Archean sulfur chemoautotrophs. Such organisms (Anoxium) evolved in an anoxic ocean prior to 3.9 × 109 yr ago at Archean analogs of modern oceanic hydrothermal vents. At this time geothermal energy was more readily available to organisms than photic energy, given atmospheric conditions at the surface similar to Venus, where intensity is low and only middle and red visible wavelengths penetrate the cloudy CO2-rich atmosphere. Competition for the reduced sulfur developed due to oxidation and loss of sulfur to sediments. Consequently, evolutionary advantage shifted to Anoxium isolates that could use alternate energy sources such as light to supplement the diminished supplies of reduced sulfur. Initially, photo-sulfur organisms evolved similar to modern purple bacteria that absorb in the red visible spectra. Subsequent carbon fixing and oxidation improved both the quantity and range of light reaching the ocean surface. This permitted absorption in the blue visible range so that water splitting was now feasible, releasing free oxygen and accelerating oxidation. Eventually, reducing environments became restricted, completing the shift in the principal marine carbon-fixing activity from anoxic chemoautotrophic to aerobic photosynthetic organisms.

  6. Long distance electron transmission couples sulphur, iron, calcium and oxygen cycling in marine sediment

    DEFF Research Database (Denmark)

    Risgaard-Petersen, Nils; Nielsen, Lars Peter

    sulfide oxidation leads to electric field formation, sulfide depletion and acidification of the upper centimeters of the sediment. This promoted ion migration and dissolution of carbonates and iron sulfides. Sulfide released from iron sulfides was the major e-donor in the system. Ferrous iron released...... from iron sulfides was to a large extend deposited in the oxic zone as iron oxides and Ca2+ eventually precipitates at the surface as due to high pH caused by cathodic oxygen reduction. The result show how long distance electron transmission allows oxygen to drive the allocation of important minerals...... geochemical alterations in the upper centimetres of the anoxic sediment: Sulphides were oxidized to sulphate in anoxic sediment layers. Electrons from this half-reaction were passed to the oxic layers cm above. In this way the domain of oxygen was extended far beyond it’s physically presence. Bioelectrical...

  7. Antarctic marine sediments as fingerprints of pollution migration

    International Nuclear Information System (INIS)

    Waheed, S.; Ahmad, S.; Rahman, A.; Qureshi, I.H.

    2001-01-01

    Forty elements in 21 coastal marine sediment samples collected during the second Antarctic scientific expedition from 18 different sites of Brekilen area located at the coast of Antarctica were analysed by instrumental neutron activation analysis (INAA) to detect eventual pollution. Radio-assay schemes for three sets of elements after neutron irradiation and cooling were evolved to avoid matrix effects. Data have been compared with those for sediments of various stations at Antarctica and two other regions in different continents. Lower concentration of certain elements in the Antarctic sediments reflects less environmental exposition. Enrichment factors (EF) were calculated for all the elements using the earth crust as reference matrix, based on elemental values by MASON, TAYLOR and WEDEPOHL which show a normal pattern near to unity expect for Ag and Br. The data obtained could also serve as a reference point from which changes in the global environment can be studied. The quality assurance of data was performed using standard reference materials (SRMs) of a similar matrix (IAEA Marine Sediment SD-M/TM and Chinese Marine Sediment GBW 07313). (author)

  8. Anoxic environments and oil source bed genesis

    Energy Technology Data Exchange (ETDEWEB)

    Demaison, G J [Chevron Overseas Petroleum Inc., San Francisco, CA; Moore, G T

    1980-01-01

    The anoxic, aquatic, environment is a mass of water so depleted in oxygen that virtually all aerobic biological activity has ceased. Anoxic conditions occur where the demand for oxygen in the water column exceeds the supply. The specific cause for preferential lipid enrichment probably relates to the biochemistry of anaerobic bacterial activity. Recent evidence suggests that ancient organic-rich sediments containing hydrogen-rich kerogens (potential oil source beds) were deposited in similar anoxic environments. We propose the following classification for modern aquatic anoxic settings: (1) Large anoxic lakes - Permanent stratification promotes development of anoxic bottom water, particularly in large, deep lakes, which are not subject to seasonal overturn, e.g., Lake Tanganyika. (2) Anoxic silled basins - Landlocked silled basins with positive water balance tend to become anoxic. Typical are the Baltic and Black Seas. In arid region seas (Red and Mediterranean Seas), evaporation exceeds river inflow, causing negative water balance and well-aerated, nutrient-depleted bottom waters. (3) Anoxic layers caused by upwelling - Develop only when the oxygen supply in deep water cannot match demand by decaying organisms. Examples are the Benguela current and Peru coastal upwelling. (4) Open ocean anoxic layers - Found at intermediate depths in the northeastern Pacific and northern Indian Oceans; due to distance from deep, oxygenated polar water sources. Analogous to world-wide anoxic events at times of global climatic warm-ups and major transgressions, as in late Jurassic and middle Cretaceous time. Petroleum exploration can be greatly assisted by using geochemistry to identify paleo-anoxic events in the stratigraphic record. Recognition of the proposed anoxic models in ancient sedimentary basins should help in regional mapping of oil shales and oil-source beds. 17 figures.

  9. Marine sediments as a sink, and contaminated sediments as a diffuse source of radionuclides

    International Nuclear Information System (INIS)

    Salbu, B.; Borretzen, P.

    1997-01-01

    Full text: Marine sediments may act as a sink for radionuclides originating from atmospheric fallout (e.g. Chernobyl accident), for radionuclides in discharges from nuclear installations (e.g. Sellafield, UK) for river transported radionuclides, and radionuclides released from nuclear waste dumped at sea (e.g. fjords at Novaya Zemlya). In order to assess short and long term consequences of radionuclides entering the marine ecosystem, the role of sediments as a relatively permanent sink and the potential for contaminated sediments to act as a diffuse source should be focused. The retention of radionuclides in sediments will depend on the source term, i.e. the physico-chemical forms of radionuclides entering the system and on interactions with various sediment components. Radionuclides associated with particles or aggregating polymers are removed from the water phase by sedimentation, while sorption to surface sediment layers is of relevance for ionic radionuclide species including negatively charged colloids. With time, transformation processes will influence the mobility of radionuclides in sediments. The diffusion into mineral lattices will increase fixation, while the influence of for instance red/ox conditions and bio-erosion may mobilize radionuclides originally fixed in radioactive particles. Thus, information of radionuclides species, surface interactions, transformation processes and kinetics is essential for reducing the uncertainties in marine transfer models. Dynamic model experiments where chemically well defined tracers are added to a sea water-marine sediment system are useful for providing information on time dependent interactions and distribution coefficients. When combined with sequential extraction techniques, information on mobility and rate of fixation is subsequently attained. In the present work experimental results from the Irish Sea and the Kara Sea will be discussed

  10. Bioavailability of sediment-bound contaminants to marine organisms

    Energy Technology Data Exchange (ETDEWEB)

    Brown, B. [Battelle/Marine Sciences Lab., Sequim, WA (United States)]|[Colby Coll., Waterville, ME (United States); Neff, J. [Battelle/Marine Sciences Lab., Sequim, WA (United States)]|[Battelle Ocean Sciences, Duxbury, MA (United States)

    1993-09-01

    The bioavailability of sediment-bound contaminants to marine organisms indicates that there exists a potential for transfer of these contaminants through marine food webs to commercial fisheries products consumed by humans. However, there has been relatively little effort to combine and synthesize data on chemical/biological interactions between benthic animals and seagrasses and the sediments in which they reside on the one hand, and on the chemistry of bioaccumulation on the other. This report provides a conceptual basis for an approach to bioavailability and biomagnification of sediment-bound contaminants that reviews biological and chemical approaches.

  11. Electric currents couple spatially separated biogeochemical processes in marine sediment

    DEFF Research Database (Denmark)

    Nielsen, Lars Peter; Risgaard-Petersen, Nils; Fossing, Henrik

    2010-01-01

    Some bacteria are capable of extracellular electron transfer, thereby enabling them to use electron acceptors and donors without direct cell contact 1, 2, 3, 4 . Beyond the micrometre scale, however, no firm evidence has previously existed that spatially segregated biogeochemical processes can...... be coupled by electric currents in nature. Here we provide evidence that electric currents running through defaunated sediment couple oxygen consumption at the sediment surface to oxidation of hydrogen sulphide and organic carbon deep within the sediment. Altering the oxygen concentration in the sea water...... in the sediment was driven by electrons conducted from the anoxic zone. A distinct pH peak in the oxic zone could be explained by electrochemical oxygen reduction, but not by any conventional sets of aerobic sediment processes. We suggest that the electric current was conducted by bacterial nanowires combined...

  12. Effects of specific inhibitors on anammox and denitrification in marine sediments.

    Science.gov (United States)

    Jensen, Marlene Mark; Thamdrup, Bo; Dalsgaard, Tage

    2007-05-01

    The effects of three metabolic inhibitors (acetylene, methanol, and allylthiourea [ATU]) on the pathways of N2 production were investigated by using short anoxic incubations of marine sediment with a 15N isotope technique. Acetylene inhibited ammonium oxidation through the anammox pathway as the oxidation rate decreased exponentially with increasing acetylene concentration; the rate decay constant was 0.10+/-0.02 microM-1, and there was 95% inhibition at approximately 30 microM. Nitrous oxide reduction, the final step of denitrification, was not sensitive to acetylene concentrations below 10 microM. However, nitrous oxide reduction was inhibited by higher concentrations, and the sensitivity was approximately one-half the sensitivity of anammox (decay constant, 0.049+/-0.004 microM-1; 95% inhibition at approximately 70 microM). Methanol specifically inhibited anammox with a decay constant of 0.79+/-0.12 mM-1, and thus 3 to 4 mM methanol was required for nearly complete inhibition. This level of methanol stimulated denitrification by approximately 50%. ATU did not have marked effects on the rates of anammox and denitrification. The profile of inhibitor effects on anammox agreed with the results of studies of the process in wastewater bioreactors, which confirmed the similarity between the anammox bacteria in bioreactors and natural environments. Acetylene and methanol can be used to separate anammox and denitrification, but the effects of these compounds on nitrification limits their use in studies of these processes in systems where nitrification is an important source of nitrate. The observed differential effects of acetylene and methanol on anammox and denitrification support our current understanding of the two main pathways of N2 production in marine sediments and the use of 15N isotope methods for their quantification.

  13. 16S rRNA gene-based molecular analysis of mat-forming and accompanying bacteria covering organically-enriched marine sediments underlying a salmon farm in Southern Chile (Calbuco Island)

    OpenAIRE

    Aranda, Carlos; Paredes, Javier; Valenzuela, Cristian; Lam, Phyllis; Guillou, Laure

    2010-01-01

    The mat forming bacteria covering organic matter-enriched and anoxic marine sediments underlying a salmon farm in Southern Chile, were examined using 16S rRNA gene phylogenies. This mat was absent in the sea bed outside the direct influence of the farm (360 m outside fish cages). Based on nearly complete 16S rRNA gene sequences (-1500 bp), mat-forming filamentous cells were settled as the sulphur-oxidizing and putatively dissimilative nitrate-reducing Beggiatoa spp., being closely related (up...

  14. Impact of redox-stratification on the diversity and distribution of bacterial communities in sandy reef sediments in a microcosm

    Institute of Scientific and Technical Information of China (English)

    GAO Zheng; WANG Xin; Angelos K. HANNIDES; Francis J. SANSONE; WANG Guangyi

    2011-01-01

    Relationships between microbial communities and geochemical environments are important in marine microbial ecology and biogeochemistry.Although biogeochemical redox stratification has been well documented in marine sediments,its impact on microbial communities remains largely unknown.In this study,we applied denaturing gradient gel electrophoresis (DGGE) and clone library construction to investigate the diversity and stratification of bacterial communities in redox-stratified sandy reef sediments in a microcosm.A total of 88 Operational Taxonomic Units (OTU) were identified from 16S rRNA clone libraries constructed from sandy reef sediments in a laboratory microcosm.They were members of nine phyla and three candidate divisions,including Proteobacteria (Alpha-,Beta-,Gamma-,Delta-,and Epsilonproteobacteria),Actinobacteria,Acidobacteria,Bacteroidetes,Chloroflexi,Cyanobacteria,Firmicutes,Verrucomicrobia,Spirochaetes,and the candidate divisions WS3,SO31 and AO19.The vast majority of these phylotypes are related to clone sequences from other marine sediments,but OTUs of Epsilonproteobacteria and WS3 are reported for the first time from permeable marine sediments.Several other OTUs are potential new bacterial phylotypes because of their low similarity with reference sequences.Results from the 16S rRNA,gene clone sequence analyses suggested that bacterial communities exhibit clear stratification across large redox gradients in these sediments,with the highest diversity found in the anoxic layer (15-25 mm) and the least diversity in the suboxic layer (3-5 mm).Analysis of the nosZ,and amoA gene libraries also indicated the stratification of denitrifiers and nitrifiers,with their highest diversity being in the anoxic and oxic sediment layers,respectively.These results indicated that redox-stratification can affect the distribution of bacterial communities in sandy reef sediments.

  15. Unexpected and novel putative viruses in the sediments of a deep-dark permanently anoxic freshwater habitat.

    Science.gov (United States)

    Borrel, Guillaume; Colombet, Jonathan; Robin, Agnès; Lehours, Anne-Catherine; Prangishvili, David; Sime-Ngando, Télesphore

    2012-11-01

    Morphological diversity, abundance and community structure of viruses were examined in the deep and anoxic sediments of the volcanic Lake Pavin (France). The sediment core, encompassing 130 years of sedimentation, was subsampled every centimeter. High viral abundances were recorded and correlated to prokaryotic densities. Abundances of viruses and prokaryotes decreased with the depth, contrasting the pattern of virus-to-prokaryote ratio. According to fingerprint analyses, the community structure of viruses, bacteria and archaea gradually changed, and communities of the surface (0-10 cm) could be discriminated from those of the intermediate (11-27 cm) and deep (28-40 cm) sediment layers. Viral morphotypes similar to virions of ubiquitous dsDNA viruses of bacteria were observed. Exceptional morphotypes, previously never reported in freshwater systems, were also detected. Some of these resembled dsDNA viruses of hyperthermophilic and hyperhalophilic archaea. Moreover, unusual types of spherical and cubic virus-like particles (VLPs) were observed. Infected prokaryotic cells were detected in the whole sediment core, and their vertical distribution correlated with both viral and prokaryotic abundances. Pleomorphic ellipsoid VLPs were visible in filamentous cells tentatively identified as representatives of the archaeal genus Methanosaeta, a major group of methane producers on earth.

  16. Sorption kinetics of TNT and RDX in anaerobic freshwater and marine sediments: Batch studies.

    Science.gov (United States)

    Ariyarathna, Thivanka; Vlahos, Penny; Tobias, Craig; Smith, Richard

    2016-01-01

    Examination of the partitioning of explosives onto sediment in marine environments is critical to predict the toxicological impacts of worldwide explosive-contaminated sites adjacent to estuaries, wetlands, and the coastal ocean. Marine sediments have been identified as sites of enhanced munitions removal, yet most studies addressing these interactions focus on soils and freshwater sediments. The present study measured the kinetics of 2,4,6-trinitrotoluene (TNT) and hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) sorption onto 2 marine sediments of varying grain sizes (silt vs sand) and organic carbon (OC) content. Abiotic sediment sorption tests were performed at 23 °C, 15 °C, and 4 °C by spiking TNT and RDX solutions directly into anaerobic sediment slurries. Marine sediments showed significantly higher compound uptake rates (0.30-0.80 h(-1) ) than freshwater silt (0.0046-0.0065 h(-1) ) for both compounds, probably because of lower compound solubilities and a higher pH in marine systems. Equilibrium partition constants are on the same order of magnitude for marine silt (1.1-2.0 L kg(-1) sediment) and freshwater silt (1.4-3.1 L kg(-1) sediment) but lower for marine sand (0.72-0.92 L kg(-1) sediment). Total organic carbon content in marine sediments varied linearly with equilibrium partition constants for TNT and was moderately linear for RDX. Uptake rates and equilibrium constants of explosives are inversely correlated to temperature regardless of sediment type because of kinetic barriers associated with low temperatures. © 2015 SETAC.

  17. Sampling marine sediments for radionuclide monitoring

    International Nuclear Information System (INIS)

    Papucci, C.

    1997-01-01

    A description of the most common devices used for sampling marine sediments are reported. The systems are compared to evidence their intrinsic usefulness, for collecting samples in different environmental conditions or with different scientific objectives. Perturbations and artifacts introduced during the various steps of the sampling procedure are also reviewed, and suggestions are proposed for obtaining and preserving, as much as possible, the representativeness of the sediment samples. (author)

  18. Can sediments at hydrocarbon seep sites represent a source for marine bioavailable iron? — A case study from the South China Sea

    Science.gov (United States)

    Li, N.; Feng, D.; Chen, D.

    2017-12-01

    Niu Li1, Dong Feng1,2, and Duofu Chen2,31CAS Key Laboratory of Ocean and Marginal Sea Geology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou 510301, China. 2Laboratory for Marine Geology, Qingdao National Laboratory for Marine Science and Technology, Qingdao 266061, China. 3Hadal Science and Technology Research Center, College of Marine Sciences, Shanghai Ocean University, Shanghai 201306, China. Iron is an essential micronutrient and commonly considered to be one of the key-limiting factors for biological productivity in many ocean regions. Seafloor Fe supply should be most efficient in suboxic conditions. Recent studies shown that widely spread anoxic environments can develop in hydrocarbon seep sediment and local bottom water, owing to the occurrence of aerobic and/or anaerobic methane oxidation. Under this condition, the iron in sediment can be reduced to dissolved Fe2+ in the ocean. However, questions remain about whether the hydrocarbon seep sediment can represent a source for bioavailable iron to the ocean, and the control factor for the transformation of iron in the sediment remains largely unexplored. For a number of hydrocarbon seeps from the northern and southern South China Sea, the iron speciation, pyrite sulfur isotope, and iron isotope, as well as the major and trace elements are used to constrain the intensity of cold seep, and its impact on transformation of iron in sediment. Samples from both areas show sediment iron lost during the high methane flux conditions, owing to the suboxic conditions cause by aerobic methane oxidation. On the other hand, high sediment iron content accompanied by high sulfur content can be seen during the conditions of high methane flux without the occurrence of aerobic methane oxidation, which is possible ascribed to the anaerobic methane oxidation and the release of iron through seep activity. This study reveals the transformation of iron in the sediment is closely related to the

  19. Cenomanian-Turanian anoxic event and potential petroleum source rocks of the Upper Benue Trough, Nigeria

    International Nuclear Information System (INIS)

    Mohammed, B.

    2004-01-01

    Foraminiferal palaeoenviromental studies particularly planktonic/benthonic (p/b) ratio have been used to demarcate anoxic horizon within the Cenomanian-Turonian sequence of the Upper Benue trough. The foraminiferal faunal assemblages indicate a deep marine .anoxic I sequences. Geochemical analysis of organic matter yielded TOC values that are generally fair to moderate with average of 0.70,2.05 and 0.44% in Dukkul, Pindiga and Gongila Formations respectively. Hydrogen indices also indicate preponderance of gas -prone terrestrial type III organic matter. This seems to be inconsistent with anoxic/dysoxic environments in which organic matter is generally expected to be commonly more abundant, better preserved and more lipid rich. Therefore, it is suggested here that such a relatively deep marine anoxic environment was subsequently raised tectonically to very shallow levels (raised oxygen-minimum zone) where terrestrial organic matter were washed into the anoxic water. These terrestrial contributions diluted and downgraded the anoxic level such that TOCs are generally low to moderate and organic matter became generally of type III and IV

  20. Radionuclide interactions with marine sediments

    International Nuclear Information System (INIS)

    Higgo, J.J.W.

    1987-09-01

    A critical review of the literature on the subject of the interactions of radionuclides with marine sediments has been carried out. On the basis of the information available, an attempt has been made to give ranges and 'best estimates' for the distribution ratios between seawater and sediments. These estimates have been based on an understanding of the sediment seawater system and the porewater chemistry and mineralogy. Field measurements, laboratory measurements and estimates based on stable-element geochemical data are all taken into account. Laboratory measurements include distribution-ratio and diffusion-coefficient determinations. The elements reviewed are carbon, chlorine, calcium, nickel, selenium, strontium, zirconium, niobium, technetium, tin, iodine, caesium, lead, radium, actinium, thorium, protactinium, uranium, neptunium, plutonium, americium and curium. (author)

  1. Quantification of Microbial Communities in Subsurface Marine Sediments of the Black Sea and off Namibia.

    Science.gov (United States)

    Schippers, Axel; Kock, Dagmar; Höft, Carmen; Köweker, Gerrit; Siegert, Michael

    2012-01-01

    Organic-rich subsurface marine sediments were taken by gravity coring up to a depth of 10 m below seafloor at six stations from the anoxic Black Sea and the Benguela upwelling system off Namibia during the research cruises Meteor 72-5 and 76-1, respectively. The quantitative microbial community composition at various sediment depths was analyzed using total cell counting, catalyzed reporter deposition - fluorescence in situ hybridization (CARD-FISH) and quantitative real-time PCR (Q-PCR). Total cell counts decreased with depths from 10(9) to 10(10) cells/mL at the sediment surface to 10(7)-10(9) cells/mL below one meter depth. Based on CARD-FISH and Q-PCR analyses overall similar proportions of Bacteria and Archaea were found. The down-core distribution of prokaryotic and eukaryotic small subunit ribosomal RNA genes (16S and 18S rRNA) as well as functional genes involved in different biogeochemical processes was quantified using Q-PCR. Crenarchaeota and the bacterial candidate division JS-1 as well as the classes Anaerolineae and Caldilineae of the phylum Chloroflexi were highly abundant. Less abundant but detectable in most of the samples were Eukarya as well as the metal and sulfate-reducing Geobacteraceae (only in the Benguela upwelling influenced sediments). The functional genes cbbL, encoding for the large subunit of RuBisCO, the genes dsrA and aprA, indicative of sulfate-reducers as well as the mcrA gene of methanogens were detected in the Benguela upwelling and Black Sea sediments. Overall, the high organic carbon content of the sediments goes along with high cell counts and high gene copy numbers, as well as an equal abundance of Bacteria and Archaea.

  2. Bacterial communities in sediment of a Mediterranean marine protected area.

    Science.gov (United States)

    Catania, Valentina; Sarà, Gianluca; Settanni, Luca; Quatrini, Paola

    2017-04-01

    Biodiversity is crucial in preservation of ecosystems, and bacterial communities play an indispensable role for the functioning of marine ecosystems. The Mediterranean marine protected area (MPA) "Capo Gallo-Isola delle Femmine" was instituted to preserve marine biodiversity. The bacterial diversity associated with MPA sediment was compared with that from sediment of an adjacent harbour exposed to intense nautical traffic. The MPA sediment showed higher diversity with respect to the impacted site. A 16S rDNA clone library of the MPA sediment allowed the identification of 7 phyla: Proteobacteria (78%), Firmicutes (11%), Acidobacteria (3%), Actinobacteria (3%), Bacteroidetes (2%), Planctomycetes (2%), and Cyanobacteria (1%). Analysis of the hydrocarbon (HC)-degrading bacteria was performed using enrichment cultures. Most of the MPA sediment isolates were affiliated with Gram-positive G+C rich bacteria, whereas the majority of taxa in the harbour sediment clustered with Alpha- and Gammaproteobacteria; no Gram-positive HC degraders were isolated from the harbour sediment. Our results show that protection probably has an influence on bacterial diversity, and suggest the importance of monitoring the effects of protection at microbial level as well. This study creates a baseline of data that can be used to assess changes over time in bacterial communities associated with a Mediterranean MPA.

  3. Quaternary magnetic excursions recorded in marine sediments.

    Science.gov (United States)

    Channell, J. E. T.

    2017-12-01

    This year is the golden (50th) anniversary of the first documentation of a magnetic excursion, the Laschamp excursion in volcanics from the Chaine des Puys (Bonhommet and Babkine, 1967). The first recording of an excursion in sediments was from the Blake Outer Ridge (Smith and Foster, 1969). Magnetic excursions are directional aberrations of the geomagnetic field apparently involving short-lived reversal of the main dipole field. They have durations of a few kyrs, and are therefore rarely recorded in sediments with mean sedimentation rates Palma), and 670 ka (Osaka Bay), implying at least 11 excursions in the Brunhes Chron. For the Matuyama Chron, excursions have been recorded in marine sediments at 868 ka (Kamikatsura?), 932 ka (Santa Rosa), 1051 ka (Intra-Jaramillo), 1115 ka (Punaruu), 1255 ka (Bjorn), 1476 ka (Gardar), 1580 ka (Gilsa), and 2737 ka (Porcupine). Excursions coincide with minima in relative paleointensity (RPI) records. Ages are from correlation of excursion records to oxygen isotope records in the same cores, and ice-volume calibration of the oxygen isotope template. The marine sediment record of excursions, combined with independent documentation of excursions in lavas with Ar/Ar age control, is progressively strengthening our knowledge of the excursion inventory in the Quaternary, and enhancing the importance of excursions and RPI in Quaternary stratigraphy.

  4. Characterization of marine sediments using analytical techniques

    International Nuclear Information System (INIS)

    Garcia-Rosales, G.; Longoria-Gandara, L.C.

    2011-01-01

    This study deals with the characterization of a marine sediments profile from the Gulf of Tehuantepec, Mexico. Ten sediment samples obtained from a core of 18.3 m of length were analysed. Although there have been numerous marine sediments studies carried out in Mexico, more are needed to better understand the sea floor formation. Crystallographic, morphologic, physical, chemical and gamma ray activity analysis were carried out on the samples. The analysis results showed a decrease in organic matter content as a function of sea depth; this value is related to the specific surface area. Some hazardous materials as Cr, Mn, Ni, Sr and Hg were also identified by PIXE in some samples, probably due to anthropogenic activity. The presence of uranium a naturally occurring element was found in all the samples, suggesting a migration through all materials of strata, radioactive elements such as 226 Ra, 235 U, 212 Pb, 214 Pb, 228 Ac, 208 Ti, 214 Bi, 228 Ac and 40 K were detected. (author)

  5. Elucidation of 10Be accumulation mechanism to sea floor with the marine sediment

    International Nuclear Information System (INIS)

    Yoshida, T.; Yamagata, T.; Saito, T.; Nagai, H.; Matsuzaki, H.

    2006-01-01

    Marine sediment samples (0-30 cm in depth) were collected in the Northwest Pacific Ocean, and South Pacific Ocean during KH00-3 (BO, 7 samples) and KH04-5 (SX, 8 samples) cruise of R/V Hakuho-Maru. The 10 Be concentration in the marine sediment samples range between 0.9x10 9 and 6.5x10 9 atoms/g, and most of the red clay sediment in the Northwest Pacific Ocean showed uniform distribution. The 9 Be concentration in the red clay sediment samples range between 2.3 and 2.6 ppm, which showed a value almost the same as measured 9 Be concentration (1.6-2.3 ppm) in the Chinese loess. The 10 Be concentration in the marine sediment were 20 times higher than the 10 Be concentration (0.2x10 9 atoms/g) in the Chinese loess. These results were suggested that most of 10 Be in the marine sediment were regarded seawater as the origin. (author)

  6. Decomposition of 14C-labeled organic substances in marine sediments

    International Nuclear Information System (INIS)

    Anon.

    1986-01-01

    The depth variation of total organic carbon (TOC), organic matter composition and porewater composition in marine sediments suggest that different components of the organic matter undergo decomposition at widely different rates. The decomposition of 14 C-labeled organic substances was followed in sediment microcosms in the laboratory. The substances used were chosen to simulate a portion of material settling to the sediment-water interface (a marine diatom) or hypothesized components of refractory sediment organic matter (melanoidins and a bacterial polymer). The microcosms were found to be good models of the sediment-water interface in terms of how well they mimicked sediment decomposition rates and processes. The decomposition of the labeled material and the natural sediment TOC were monitored over 1 month: the water overlying the sediment remained oxic, and net consumption of nitrate was small. There was no detectable sulfate reduction. The algae and the bacterial polymer were decomposed on average 9x faster than the melanoidins and 90x faster than the natural sediment TOC. The soluble fraction of the algae was decomposed more rapidly than the particulate material

  7. Autecology of crenarchaeotal and bacterial clades in marine sediments and microbial mats

    OpenAIRE

    Kubo, Kyoko

    2011-01-01

    The focus of this thesis was the autecology of the Miscellaneous Crenarchaeotal Group (MCG), a phylum-level clade of Archaea occurring mostly in marine sediments. Sequences of MCG 16S rRNA genes have been retrieved from a wide range of marine and terrestrial habitats, such as deep subsurface sediments, hydrothermal sediments, mud volcanoes, estuaries, hot springs and freshwater lake sediments. MCG members seem to have no general preferences for a particular temperature or salinity. So far, no...

  8. The Microworld of Marine-Bacteria

    DEFF Research Database (Denmark)

    JØRGENSEN, BB

    1995-01-01

    Microsensor studies show that the marine environment in the size scale of bacteria is physically and chemically very different from the macroenvironment. The microbial world of the sediment-water interface is thus dominated by water viscosity and steep diffusion gradients. Because of the diverse...... metabolism types, bacteria in the mostly anoxic sea floor play an important role in the major element cycles of the ocean. The communities of giant, filamentous sulfur bacteria that live in the deep-sea hydrothermal vents or along the Pacific coast of South America are presented here as examples....

  9. 20th-century glacial-marine sedimentation in Vitus Lake, Bering Glacier, Alaska, U.S.A.

    Science.gov (United States)

    Molnia, B.F.; Post, A.; Carlson, P.R.

    1996-01-01

    Vitus Lake, the ice-marginal basin at the southeastern edge of Bering Glacier, Alaska, U.S.A., is a site of modern, rapid, glacial-marine sedimentation. Rather than being a fresh-water lake, Vitus Lake is a tidally influenced, marine to brackish embayment connected to the Pacific Ocean by an inlet, the Seal River. Vitus Lake consists of five deep bedrock basins, separated by interbasinal highs. Glacial erosion has cut these basins as much as 250 m below sea level. High-resolution seismic reflection surveys conducted in 1991 and 1993 of four of Vitus Lake's basins reveal a complex, variable three-component acoustic stratigraphy. Although not fully sampled, the stratigraphy is inferred to be primarily glacial-marine units of (1) basal contorted and deformed glacial-marine and glacial sediments deposited by basal ice-contact processes and submarine mass-wasting; (2) acoustically well-stratified glacial-marine sediment, which unconformably overlies the basal unit and which grades upward into (3) acoustically transparent or nearly transparent glacial-marine sediment. Maximum thicknesses of conformable glacial-marine sediment exceed 100 m. All of the acoustically transparent and stratified deposits in Vitus Lake are modern in age, having accumulated between 1967 and 1993. The basins where these three-part sequences of "present-day" glacial-marine sediment are accumulating are themselves cut into older sequences of stratified glacial and glacial-marine deposits. These older units outcrop on the islands in Vitus Lake. In 1967, as the result of a major surge, glacier ice completely filled all five basins. Subsequent terminus retreat, which continued through August 1993, exposed these basins, providing new locations for glacial-marine sediment accumulation. A correlation of sediment thicknesses measured from seismic profiles at specific locations within the basins, with the year that each location became ice-free, shows that the sediment accumulation at some locations

  10. World wide intercomparison of trace element measurements in marine sediments SD-M-2/TM

    International Nuclear Information System (INIS)

    Mee, L.D.; Oregioni, B.

    1991-09-01

    The accurate and precise determination of trace elements in marine sediments is an important aspect of geochemical studies of the marine environment and for assessing the levels and pathways of marine pollutants. Past intercomparison studies conducted by the Marine Environment Laboratory of IAEA (formerly the International Laboratory of Marine Radioactivity) have focussed upon near-shore marine sediments where trace metal contamination is frequently observed. The present exercise was designed to study a typical oxidised deep-sea sediment characterized by a preponderance of fine particle clays. Analysis of such material is a routine matter for most geochemists but represents a ''baseline sample'' for marine pollution chemists. The present exercise represented a unique opportunity for chemists worldwide to intercompare their analytical methodologies for deep-sea sediments. By statistically examining the data from this study, the material can be certified for future use as a reference material - apparently the only one of its kind available throughout the world. 6 refs, figs and tabs

  11. Sediment and contaminant transport in a marine environment

    International Nuclear Information System (INIS)

    Onishi, Y.; Thompson, F.L.

    1986-01-01

    The finite-element model FETRA is an unsteady, verically averaged two-dimensional model to simulate the transport of sediment and contaminants (radionuclides, heavy metals, pesticides, etc.) in coastal and estuarine water. The model, together with the hydrodynamic model CAFE-I, was applied to the Irish Sea to predict the migration and accumulation of sediment (both cohesive and noncohesive) and of a radionuclide (dissolved and sediment-sorbed) in a tide- and wind-driven system. The study demonstrated that FETRA is a useful tool for assessing sediment and toxic contaminant transport in a marine environment

  12. The Oil-Spill Snorkel: an innovative bioelectrochemical approach to accelerate hydrocarbons biodegradation in marine sediments

    Directory of Open Access Journals (Sweden)

    Carolina eCruz Viggi

    2015-09-01

    Full Text Available This study presents the proof-of-concept of the Oil-Spill Snorkel: a novel bioelectrochemical approach to stimulate the oxidative biodegradation of petroleum hydrocarbons in sediments. The Oil-Spill Snorkel consists of a single conductive material (the snorkel positioned suitably to create an electrochemical connection between the anoxic zone (the contaminated sediment and the oxic zone (the overlying O2-containing water. The segment of the electrode buried within the sediment plays a role of anode, accepting electrons deriving from the oxidation of contaminants. Electrons flow through the snorkel up to the part exposed to the aerobic environment (the cathode, where they reduce oxygen to form water. Here we report the results of lab-scale microcosms setup with marine sediments and spiked with crude oil. Microcosms containing 1 or 3 graphite snorkels and controls (snorkel-free and autoclaved were monitored for over 400 days. Collectively, the results of this study confirmed that the snorkels accelerate oxidative reactions taking place within the sediment, as documented by a significant 1.7-fold increase (p=0.023, two-tailed t-test in the cumulative oxygen uptake and 1.4-fold increase (p=0.040 in the cumulative CO2 evolution in the microcosms containing 3 snorkels compared to snorkel-free controls. Accordingly, the initial rate of total petroleum hydrocarbons (TPH degradation was also substantially enhanced. Indeed, while after 200 days of incubation a negligible degradation of TPH was noticed in snorkel-free controls, a significant reduction of 12±1% (p=0.004 and 21±1% (p=0.001 was observed in microcosms containing 1 and 3 snorkels, respectively. Although, the Oil-Spill Snorkel potentially represents a groundbreaking alternative to more expensive remediation options, further research efforts are needed to clarify factors and conditions affecting the snorkel-driven biodegradation processes and to identify suitable configurations for field

  13. A small-scale, portable method for extracting microplastics from marine sediments.

    Science.gov (United States)

    Coppock, Rachel L; Cole, Matthew; Lindeque, Penelope K; Queirós, Ana M; Galloway, Tamara S

    2017-11-01

    Microplastics (plastic particles, 0.1 μm-5 mm in size) are widespread marine pollutants, accumulating in benthic sediments and shorelines the world over. To gain a clearer understanding of microplastic availability to marine life, and the risks they pose to the health of benthic communities, ecological processes and food security, it is important to obtain accurate measures of microplastic abundance in marine sediments. To date, methods for extracting microplastics from marine sediments have been disadvantaged by complexity, expense, low extraction efficiencies and incompatibility with very fine sediments. Here we present a new, portable method to separate microplastics from sediments of differing types, using the principle of density floatation. The Sediment-Microplastic Isolation (SMI) unit is a custom-built apparatus which consistently extracted microplastics from sediments in a single step, with a mean efficiency of 95.8% (±SE 1.6%; min 70%, max 100%). Zinc chloride, at a density of 1.5 g cm -3 , was deemed an effective and relatively inexpensive floatation media, allowing fine sediment to settle whilst simultaneously enabling floatation of dense polymers. The method was validated by artificially spiking sediment with low and high density microplastics, and its environmental relevance was further tested by extracting plastics present in natural sediment samples from sites ranging in sediment type; fine silt/clay (mean size 10.25 ± SD 3.02 μm) to coarse sand (mean size 149.3 ± SD 49.9 μm). The method presented here is cheap, reproducible and is easily portable, lending itself for use in the laboratory and in the field, eg. on board research vessels. By employing this method, accurate estimates of microplastic type, distribution and abundance in natural sediments can be achieved, with the potential to further our understanding of the availability of microplastics to benthic organisms. Copyright © 2017 The Authors. Published by Elsevier Ltd.. All

  14. Global diffusive fluxes of methane in marine sediments

    Science.gov (United States)

    Egger, Matthias; Riedinger, Natascha; Mogollón, José M.; Jørgensen, Bo Barker

    2018-06-01

    Anaerobic oxidation of methane provides a globally important, yet poorly constrained barrier for the vast amounts of methane produced in the subseafloor. Here we provide a global map and budget of the methane flux and degradation in diffusion-controlled marine sediments in relation to the depth of the methane oxidation barrier. Our new budget suggests that 45-61 Tg of methane are oxidized with sulfate annually, with approximately 80% of this oxidation occurring in continental shelf sediments (methane in steady-state diffusive sediments, we calculate that 3-4% of the global organic carbon flux to the seafloor is converted to methane. We further report a global imbalance of diffusive methane and sulfate fluxes into the sulfate-methane transition with no clear trend with respect to the corresponding depth of the methane oxidation barrier. The observed global mean net flux ratio between sulfate and methane of 1.4:1 indicates that, on average, the methane flux to the sulfate-methane transition accounts for only 70% of the sulfate consumption in the sulfate-methane transition zone of marine sediments.

  15. Quantification of microbial communities in subsurface marine sediments of the Black Sea and off Namibia

    Directory of Open Access Journals (Sweden)

    Axel eSchippers

    2012-01-01

    Full Text Available Organic-rich subsurface marine sediments were taken by gravity coring up to a depth of 10 meters below seafloor at six stations from the anoxic Black Sea and the Benguela upwelling system off Namibia during the research cruises R/V Meteor 72/5 and 76/1, respectively. The quantitative microbial community composition at various sediment depths was analyzed using total cell counting, CARD-FISH and quantitative real-time PCR (Q-PCR. Total cell counts decreased with depths from 109 – 1010 cells /mL at the sediment surface to 107 – 109 cells /mL below one meter depth. Based on CARD-FISH and Q-PCR analysis overall similar proportions of Bacteria and Archaea were determined. The down core quantitative distribution of prokaryotic and eukaryotic small subunit ribosomal RNA genes as well as functional genes involved in different biogeochemical processes was successfully revealed by Q-PCR. Crenarchaeota and the bacterial candidate division JS-1 and the classes Anaerolineae and Caldilineae of the phylum Chloroflexi were as highly abundant as Archaea and Bacteria, respectively. Less abundant but detectable in most of the samples in high gene copy numbers were Eukarya and the Fe(III- and Mn(IV-reducing bacterial group Geobacteriaceae (off Namibia as well as the functional genes cbbL encoding for the large subunit of Rubisco, the functional genes dsrA and aprA of sulfate-reducers and the gene mcrA of methanogens. Overall the high organic carbon content of the sediments goes along with high cell counts and high gene copy numbers, as well as an equal abundance of Bacteria and Archaea.

  16. Anaerobic animals from an ancient, anoxic ecological niche

    Directory of Open Access Journals (Sweden)

    Martin William

    2010-04-01

    Full Text Available Abstract Tiny marine animals that complete their life cycle in the total absence of light and oxygen are reported by Roberto Danovaro and colleagues in this issue of BMC Biology. These fascinating animals are new members of the phylum Loricifera and possess mitochondria that in electron micrographs look very much like hydrogenosomes, the H2-producing mitochondria found among several unicellular eukaryotic lineages. The discovery of metazoan life in a permanently anoxic and sulphidic environment provides a glimpse of what a good part of Earth's past ecology might have been like in 'Canfield oceans', before the rise of deep marine oxygen levels and the appearance of the first large animals in the fossil record roughly 550-600 million years ago. The findings underscore the evolutionary significance of anaerobic deep sea environments and the anaerobic lifestyle among mitochondrion-bearing cells. They also testify that a fuller understanding of eukaryotic and metazoan evolution will come from the study of modern anoxic and hypoxic habitats.

  17. Rock magnetic and geochemical analyses of surface sediment characteristics in deep ocean environments: A case study across the Ryukyu Trench

    Science.gov (United States)

    Kawamura, N.; Kawamura, K.; Ishikawa, N.

    2008-03-01

    Magnetic minerals in marine sediments are often dissolved or formed with burial depth, thereby masking the primary natural remanent magnetization and paleoclimate signals. In order to clarify the present sedimentary environment and the progressive changes with burial depth in the magnetic properties, we studied seven cores collected from the Ryukyu Trench, southwest Japan. Magnetic properties, organic geochemistry, and interstitial water chemistry of seven cores are described. Bottom water conditions at the landward slope, trench floor, and seaward slope are relatively suboxic, anoxic, and oxic, respectively. The grain size of the sediments become gradually finer with the distance from Okinawa Island and finer with increasing water depth. The magnetic carriers in the sediments are predominantly magnetite and maghemized magnetite, with minor amounts of hematite. In the topmost sediments from the landward slope, magnetic minerals are diluted by terrigenous materials and microfossils. The downcore variations in magnetic properties and geochemical data provided evidence for the dissolution of fine-grained magnetite with burial depth under an anoxic condition.

  18. Presence of uranium and plutonium in marine sediments from gulf of Tehuantepec, Mexico

    International Nuclear Information System (INIS)

    Ordonez-Regil, E.; Almazan-Torres, M.G.; Sanchez-Cabeza, J.A.; Ruiz-Fernandez, A.C.

    2013-01-01

    Uranium and plutonium were determined in the Tehua II-21 sediment core collected from the Gulf of Tehuantepec, Mexico. The analyses were performed using radiochemical separation and alpha spectroscopy. Activity concentrations of alpha emitters in the sediment samples were from 2.56 to 43.1 Bq/kg for 238 U, from 3.15 to 43.1 Bq/kg for 234 U and from 0.69 to 2.95 Bq/Kg for 239+240 Pu. Uranium activity concentration in marine sediment studied is generally high compared with those found in sediments from other marine coastal areas in the world. The presence of relatively high concentrations of anthropogenic plutonium in the sediments from the Gulf of Tehuantepec suggests that anthropogenic radionuclides have been incorporated and dispersed into the global marine environment. (author)

  19. The life sulfuric: microbial ecology of sulfur cycling in marine sediments.

    Science.gov (United States)

    Wasmund, Kenneth; Mußmann, Marc; Loy, Alexander

    2017-08-01

    Almost the entire seafloor is covered with sediments that can be more than 10 000 m thick and represent a vast microbial ecosystem that is a major component of Earth's element and energy cycles. Notably, a significant proportion of microbial life in marine sediments can exploit energy conserved during transformations of sulfur compounds among different redox states. Sulfur cycling, which is primarily driven by sulfate reduction, is tightly interwoven with other important element cycles (carbon, nitrogen, iron, manganese) and therefore has profound implications for both cellular- and ecosystem-level processes. Sulfur-transforming microorganisms have evolved diverse genetic, metabolic, and in some cases, peculiar phenotypic features to fill an array of ecological niches in marine sediments. Here, we review recent and selected findings on the microbial guilds that are involved in the transformation of different sulfur compounds in marine sediments and emphasise how these are interlinked and have a major influence on ecology and biogeochemistry in the seafloor. Extraordinary discoveries have increased our knowledge on microbial sulfur cycling, mainly in sulfate-rich surface sediments, yet many questions remain regarding how sulfur redox processes may sustain the deep-subsurface biosphere and the impact of organic sulfur compounds on the marine sulfur cycle. © 2017 The Authors. Environmental Microbiology published by Society for Applied Microbiology and John Wiley & Sons Ltd.

  20. Methane oxidation coupled to oxygenic photosynthesis in anoxic waters

    Science.gov (United States)

    Milucka, Jana; Kirf, Mathias; Lu, Lu; Krupke, Andreas; Lam, Phyllis; Littmann, Sten; Kuypers, Marcel MM; Schubert, Carsten J

    2015-01-01

    Freshwater lakes represent large methane sources that, in contrast to the Ocean, significantly contribute to non-anthropogenic methane emissions to the atmosphere. Particularly mixed lakes are major methane emitters, while permanently and seasonally stratified lakes with anoxic bottom waters are often characterized by strongly reduced methane emissions. The causes for this reduced methane flux from anoxic lake waters are not fully understood. Here we identified the microorganisms and processes responsible for the near complete consumption of methane in the anoxic waters of a permanently stratified lake, Lago di Cadagno. Interestingly, known anaerobic methanotrophs could not be detected in these waters. Instead, we found abundant gamma-proteobacterial aerobic methane-oxidizing bacteria active in the anoxic waters. In vitro incubations revealed that, among all the tested potential electron acceptors, only the addition of oxygen enhanced the rates of methane oxidation. An equally pronounced stimulation was also observed when the anoxic water samples were incubated in the light. Our combined results from molecular, biogeochemical and single-cell analyses indicate that methane removal at the anoxic chemocline of Lago di Cadagno is due to true aerobic oxidation of methane fuelled by in situ oxygen production by photosynthetic algae. A similar mechanism could be active in seasonally stratified lakes and marine basins such as the Black Sea, where light penetrates to the anoxic chemocline. Given the widespread occurrence of seasonally stratified anoxic lakes, aerobic methane oxidation coupled to oxygenic photosynthesis might have an important but so far neglected role in methane emissions from lakes. PMID:25679533

  1. Experimental investigation on consistency limits of cement and lime-stabilized marine sediments.

    Science.gov (United States)

    Wang, DongXing; Zentar, Rachid; Abriak, Nor Edine; Xu, WeiYa

    2012-06-01

    This paper presents the effects of treatments with cement and lime on the consistency limits of marine sediments dredged from Dunkirk port. The Casagrande percussion test and the fall cone test were used to determine the liquid limits of raw sediments and treated marine sediments. For the evaluation of the plastic limits, the results of the fall cone test were compared with those obtained by the rolling test method. The relationship between the water contents and the penetration depths for the determination of the liquid limit and the plastic limit was explored. Liquid limits at 15.5 mm and plastic limits at 1.55 mm seem to be a more appropriate choice for the studied marine sediments compared with the limits determined by other used prediction methods. Finally, the effect of cement treatment and lime treatment on the Casagrande classification of the studied sediments was investigated according to the different prediction results.

  2. Measurement of uranium and thorium in marine sediments

    International Nuclear Information System (INIS)

    Denden, Ibtihel

    2009-01-01

    Lakes, oceans and seas accumulate sediments. These sediments constitute a file of the last environmental conditions going up in some cases to thousands of years. In our study, we consulted this file by analyzing radioisotopes of Uranium and Thorium that are included in a carrot of marine sediment taken from the south of Mediterranean Sea. When we applied the technique developed by the maritime environment's laboratory of Monaco, we found spectra with bad resolutions. For this reason, the optimization of this protocol appeared necessary. (Author).

  3. Neutron activation analysis studies of marine biological species and related marine sediments

    International Nuclear Information System (INIS)

    Guinn, V.P.; Di Casa, M.; de Goeij, J.J.M.; Young, D.R.

    1974-01-01

    To assess the effects, if any, of elemental pollution of the Pacific Ocean from the major Southern California sewage outfalls, samples of ocean sediments were obtained and specimens of Dover Sole were caught in a number of locations. Liver tissue samples from Dover Sole specimens were analyzed for 12 elements and sediment samples for 4 elements. Although a number of the elements were highly concentrated in the surface sediments in the heavily-polluted areas, the Dover Sole showed no evidence of picking up any of the 12 elements from these polluted sediments. Sediment profiles, versus depth, (0-34 cm) were also determined for As, Sb, Se, and Hg. Stemming partly from the results of the NSF Baseline Study, the Southern California Coastal Water Research Project (SCCWRP) became interested in a more intensive multi-element study of marine biological species and ocean sediments off the coast of Southern California. The purpose of this study was to assess the effects, if any, of a number of selected elements of interest being discharged into the Pacific Ocean from the principal sewage outfalls in the Southern California (Los Angeles) area upon marine biological species. The 12 elements selected for study were Cr, Fe, Co, Cu, Zn, As, Se, Mo, Ag, Cd, Sb, and Hg. Since a number of these elements were not amenable to purely instrumental NAA measurements, a suitable post-irradiation radiochemical separation procedure was devised, thoroughly tested, and then applied to 39 samples of liver tissue from specimens of Dover Sole caught in non-polluted, slightly-polluted, fairly-polluted, and heavily-polluted areas along the coast. A number of surface sediment samples from these same locations were also analyzed, by both instrumental and radiochemical NAA. In the following sections, the samples analyzed are cited, the procedures developed and employed are described, the results obtained are presented, and the conclusions reached are discussed

  4. Occurrence and sorption properties of arsenicals in marine sediments

    DEFF Research Database (Denmark)

    Fauser, Patrik; Sanderson, Hans; Hedegaard, Rikke Susanne Vingborg

    2013-01-01

    in marine sediments when conditions are similar to the Baltic Sea. At locations with significant anthropogenic point sources or where the local geology contains volcanic rock and sulphide mineral deposits, there may be significantly elevated arsenic concentrations, and it is recommended to determine on......The content of total arsenic, the inorganic forms: arsenite (As(III)) and arsenate (As(V)), the methylated forms: monomethylarsonic acid and dimethylarsinic acid (DMA), trimethylarsenic oxide, tetramethylarsenonium ion and arsenobetaine was measured in 95 sediment samples and 11 pore water samples...... in the Baltic Sea and other parts of the world. Existing data for on-site measurements of sorption coefficients (Kd) of arsenicals in marine and freshwater sediments show large variability from 1,000 L/kg. In this work, calculated sorption coefficients (Kd and Koc) for As(III+V) showed significant correlation...

  5. Necromass as a source of energy to microorganisms in marine sediments.

    Science.gov (United States)

    Bradley, J.; Amend, J.; LaRowe, D.

    2017-12-01

    Marine sediments constitute one of the largest, most energy-limited biospheres on Earth. Despite increasing exploration and interest characterizing microbial communities in marine sediments, the production and role of microbial dead-matter (necromass) has largely been overlooked. Necromass is produced on a global scale, yet its significance as a power source to heterotrophic microorganisms remains unknown. We developed a physical, bio-energetic and geochemical model to quantify the total power supply from necromass oxidation and the total power demand of living microorganisms in marine sediments. This model is first applied to sediments from the oligotrophic South Pacific Gyre (SPG), where organic carbon and biomass concentrations are extremely low, yet microorganisms persist for millions of years in some of the lowest energy states on Earth. We show that necromass does not supply sufficient power to support the total demands of the living community (maintenance demands of microorganisms in marine sediments for up to 60,000 years following burial. Our model assumes that all counted cells are viable. Yet, if only a fraction of counted cells are alive, the role of necromass as an electron donor in fueling microbial metabolisms is even greater. This new insight requires a reassessment of carbon fluxes in the deep biosphere. By extension, we also demonstrate a mechanism for microbial communities to persist by oxidizing necromass over geological timescales, and thereby endure unfavorable, low-energy settings that might be analogous to conditions on early Earth and on other planetary bodies.

  6. Phosphorus sorption on marine carbonate sediment: phosphonate as model organic compounds.

    Science.gov (United States)

    Huang, Xiao-Lan; Zhang, Jia-Zhong

    2011-11-01

    Organophosphonate, characterized by the presence of a stable, covalent, carbon to phosphorus (C-P) bond, is a group of synthetic or biogenic organophosphorus compounds. The fate of these organic phosphorus compounds in the environment is not well studied. This study presents the first investigation on the sorption of phosphorus (P) in the presence of two model phosphonate compounds, 2-aminothylphosphonoic acid (2-AEP) and phosphonoformic acid (PFA), on marine carbonate sediments. In contrast to other organic P compounds, no significant inorganic phosphate exchange was observed in seawater. P was found to adsorb on the sediment only in the presence of PFA, not 2-AEP. This indicated that sorption of P from phosphonate on marine sediment was compound specific. Compared with inorganic phosphate sorption on the same sediments, P sorption from organic phosphorus is much less in the marine environment. Further study is needed to understand the potential role of the organophosphonate compounds in biogeochemical cycle of phosphorus in the environment. Copyright © 2011 Elsevier Ltd. All rights reserved.

  7. A marine microbial consortium apparently mediating anaerobic oxidation of methane

    DEFF Research Database (Denmark)

    Boetius, A.; Ravenschlag, K.; Schubert, CJ

    2000-01-01

    microorganisms mediating this reaction have not yet been isolated, and the pathway of anaerobic oxidation of methane is insufficiently understood. Recent data suggest that certain archaea reverse the process of methanogenesis by interaction with sulphate-reducing bacteria(5-7). Here we provide microscopic...... cells and are surrounded by sulphate-reducing bacteria. These aggregates were abundant in gas-hydrate-rich sediments with extremely high rates of methane-based sulphate reduction, and apparently mediate anaerobic oxidation of methane.......A large fraction of globally produced methane is converted to CO2 by anaerobic oxidation in marine sediments(1). Strong geochemical evidence for net methane consumption in anoxic sediments is based on methane profiles(2), radiotracer experiments(3) and stable carbon isotope data(4). But the elusive...

  8. Marine dredged sediments as new materials resource for road construction.

    Science.gov (United States)

    Siham, Kamali; Fabrice, Bernard; Edine, Abriak Nor; Patrick, Degrugilliers

    2008-01-01

    Large volumes of sediments are dredged each year in Europe in order to maintain harbour activities. With the new European Union directives, harbour managers are encouraged to find environmentally sound solutions for these materials. This paper investigates the potential uses of Dunkirk marine dredged sediment as a new material resource for road building. The mineralogical composition of sediments is evaluated using X-ray diffraction and microscopy analysis. Since sediments contain a high amount of water, a dewatering treatment has been used. Different suitable mixtures, checking specific geotechnical criteria as required in French standards, are identified. The mixtures are then optimized for an economical reuse. The mechanical tests conducted on these mixtures are compaction, bearing capacity, compression and tensile tests. The experimental results show the feasibility of the beneficial use of Dunkirk marine dredged sand and sediments as a new material for the construction of foundation and base layers for roads. Further research is now needed to prove the resistance of this new material to various environmental impacts (e.g., frost damage).

  9. Avalanches of sediment form deep-marine depositions

    NARCIS (Netherlands)

    Pohl, Florian|info:eu-repo/dai/nl/34309424X

    2017-01-01

    The deep ocean is the largest sedimentary system basin on the planet. It serves as the primary storage point for all terrestrially weathered sediment that makes it beyond the near-shore environment. These deep-marine offshore deposits have become a focus of attention in exploration due to the

  10. Effect of sediment properties on the sorption of C12-2-LAS in marine and estuarine sediments

    NARCIS (Netherlands)

    Rico Rico, A.; Temara, A.; Behrends, T.; Hermens, J.L.M.

    2009-01-01

    Linear alkylbenzene sulfonates (LAS) are anionic high production volume surfactants used in the manufacture of cleaning products. Here, we have studied the effect of the characteristics of marine and estuarine sediments on the sorption of LAS. Sorption experiments were performed with single sediment

  11. Succession of cable bacteria and electric currents in marine sediment

    DEFF Research Database (Denmark)

    Schauer, Regina; Risgaard-Petersen, Nils; Kjeldsen, Kasper Urup

    2014-01-01

    conductivity, we followed a population for 53 days after exposing sulphidic sediment with initially no detectable filaments to oxygen. After 10 days, cable bacteria and electric currents were established throughout the top 15[thinsp]mm of the sediment, and after 21 days the filament density peaked with a total......][mu]m, with a general increase over time and depth, and yet they shared 16S rRNA sequence identity of >98%. Comparison of the increase in biovolume and electric current density suggested high cellular growth efficiency. While the vertical expansion of filaments continued over time and reached 30[thinsp]mm, the electric...... current density and biomass declined after 13 and 21 days, respectively. This might reflect a breakdown of short filaments as their solid sulphide sources became depleted in the top layers of the anoxic zone. In conclusion, cable bacteria combine rapid and efficient growth with oriented movement...

  12. Uranium and plutonium in marine sediments; Uranio y plutonio en sedimentos marinos

    Energy Technology Data Exchange (ETDEWEB)

    Ordonez R, E.; Almazan T, M. G. [ININ, Carretera Mexico-Toluca s/n, 52750 Ocoyoacac, Estado de Mexico (Mexico); Ruiz F, A. C., E-mail: eduardo.ordonez@inin.gob.mx [UNAM, Instituto de Ciencias del Mar y Limnologia, Unidad Academica Mazatlan, Sinaloa (MX)

    2011-11-15

    The marine sediments contain uranium concentrations that are considered normal, since the seawater contains dissolved natural uranium that is deposited in the bed sea in form of sediments by physical-chemistry and bio-genetics processes. Since the natural uranium is constituted of several isotopes, the analysis of the isotopic relationship {sup 234}U/{sup 238}U are an indicator of the oceanic activity that goes accumulating slowly leaving a historical registration of the marine events through the profile of the marine soil. But the uranium is not the only radioelement present in the marine sediments. In the most superficial strata the presence of the {sup 239+140}Pu has been detected that it is an alpha emitter and that recently it has been detected with more frequency in some coasts of the world. The Mexican coast has not been the exception to this phenomenon and in this work the presence of {sup 239-140}Pu is shown in the more superficial layers of an exploring coming from the Gulf of Tehuantepec. (Author)

  13. Instrumental neutron activation analysis of marine sediment in-house reference material

    International Nuclear Information System (INIS)

    Nazaratul Ashifa Abdullah Salim; Mohd Suhaimi Hamzah; Mohd Suhaimi Elias; Siong, W.B.; Shamsiah Abdul Rahman; Azian Hashim; Shakirah Abdul Shukor

    2013-01-01

    Reference materials play an important role in demonstrating the quality and reliability of analytical data. The advantage of using in-house reference materials is that they provide a relatively cheap option as compared to using commercially available certified reference material (CRM) and can closely resemble the laboratory routine test sample. A marine sediment sample was designed as an in-house reference material, in the framework of quality assurance and control (QA/QC) program of the Neutron Activation Analysis (NAA) Laboratory at Nuclear Malaysia. The NAA technique was solely used for the homogeneity test of the marine sediment sample. The CRM of IAEA- Soil 7 and IAEA- SL1 (Lake Sediment) were applied in the analysis as compatible matrix based reference materials for QA purposes. (Author)

  14. The Cogollo Group and the oceanic anoxic events 1a and 1b, Maracaibo basin, Venezuela

    Directory of Open Access Journals (Sweden)

    José Alejandro Méndez Dot

    Full Text Available ABSTRACTCarbonates of Cogollo Group (Apón, Lisure and Maraca formations constitute the broader calcareous platform system originated during Aptian and Albian of Cretaceous in north-western South America, Maracaibo Basin, Venezuela. On the shallow shelf, a variety of calcareous sedimentary facies were deposited during marine transgressive and regressive cycles. Some of them developed porosity and constitute important hydrocarbon reservoirs. Due to some major marine transgressions, from early Aptian, the anoxic environment and characteristic facies of a pelagic environment moved from the outer slope and basin to the shallow shelf, during specific time intervals, favouring the sedimentation of organic matter-rich facies, which correspond to the oceanic anoxic events (OAEs 1a and 1b. The source rock of Machiques Member (Apón Formation was deposited during early Aptian OAE 1a (~ 120 Ma. The source rock of Piché Member, located at the top of the Apón Formation, was deposited during late Aptian OAE 1b (~ 113 Ma. Finally, La Luna Formation, from Cenomanian, that covers the OAE 2 (~ 93 Ma, represents the most important source rock in the Maracaibo Basin. In this way and based on sedimentological and organic geochemistry results from the determinations performed on 247 samples belonging to six cores in the Maracaibo Basin, we propose these two organic-rich levels, deposited on the shallow shelf of the Cogollo Group, as "effective source rocks", additional to La Luna Formation, with oil migration in relatively small distances to the porosity facies.

  15. Volatile fatty acids as substrates for iron and sulfate reduction in Arctic marine sediments, Svalbard

    Science.gov (United States)

    Finke, N.; Vandieken, V.; Jorgensen, B. B.

    2006-12-01

    Anaerobic degradation of complex organic material in aquatic systems is a multi-step process. The metabolic products of fermentative bacteria serve as electron donors for the terminal oxidizing bacteria. In marine sediments, iron reduction and sulfate reduction are generally the most important terminal oxidation processes in the upper anoxic zone [1]. Microorganisms that reduce iron and sulfate may use a broad range of electron donors, yet the list of potential substrates provides little information about the substrates used in situ by these organisms. Investigations on the electron donors for sulfate reducers in marine sediments have shown that volatile fatty acids (VFA), and in particular acetate, together with hydrogen are the major substrates (e.g. [2-4]). Similar investigations for iron reduction or simultaneous iron and sulfate reduction are lacking for marine sediments. Furthermore, most of these studies were made in temperate sediments and little is known about the substrates for sulfate reducers in permanently cold sediments, which account for >90% of the ocean floor [5]. We investigated the relative contributions of iron reduction and sulfate reduction to the terminal oxidation of organic carbon and the importance of acetate, lactate, propionate, and isobutyrate as electron donors for iron and sulfate reduction in permanently cold, Arctic sediments from Svalbard. In the surface layer (0-2 cm) sulfate reduction accounted for 2/3 of the organic carbon oxidation (determined as DIC production), the remaining 1/3 were attributed to iron reduction. In the 5-9 cm layer sulfate reduction was the sole important terminal oxidation step. The contribution of acetate to terminal oxidation was determined by radiotracer incubation as well as from the accumulation after the inhibition of sulfate reduction by selenate. The rates determined with the two methods varied by less than 20%. Acetate turnover, determined with the tracer incubations, accounted for 10 and 40% of

  16. Methane oxidation and methane fluxes in the ocean surface layer and deep anoxic waters

    Science.gov (United States)

    Ward, B. B.; Kilpatrick, K. A.; Novelli, P. C.; Scranton, M. I.

    1987-01-01

    Measured biological oxidation rates of methane in near-surface waters of the Cariaco Basin are compared with the diffusional fluxes computed from concentration gradients of methane in the surface layer. Methane fluxes and oxidation rates were investigated in surface waters, at the oxic/anoxic interface, and in deep anoxic waters. It is shown that the surface-waters oxidation of methane is a mechanism which modulates the flux of methane from marine waters to the atmosphere.

  17. Estimating Population Turnover Rates by Relative Quantification Methods Reveals Microbial Dynamics in Marine Sediment.

    Science.gov (United States)

    Kevorkian, Richard; Bird, Jordan T; Shumaker, Alexander; Lloyd, Karen G

    2018-01-01

    The difficulty involved in quantifying biogeochemically significant microbes in marine sediments limits our ability to assess interspecific interactions, population turnover times, and niches of uncultured taxa. We incubated surface sediments from Cape Lookout Bight, North Carolina, USA, anoxically at 21°C for 122 days. Sulfate decreased until day 68, after which methane increased, with hydrogen concentrations consistent with the predicted values of an electron donor exerting thermodynamic control. We measured turnover times using two relative quantification methods, quantitative PCR (qPCR) and the product of 16S gene read abundance and total cell abundance (FRAxC, which stands for "fraction of read abundance times cells"), to estimate the population turnover rates of uncultured clades. Most 16S rRNA reads were from deeply branching uncultured groups, and ∼98% of 16S rRNA genes did not abruptly shift in relative abundance when sulfate reduction gave way to methanogenesis. Uncultured Methanomicrobiales and Methanosarcinales increased at the onset of methanogenesis with population turnover times estimated from qPCR at 9.7 ± 3.9 and 12.6 ± 4.1 days, respectively. These were consistent with FRAxC turnover times of 9.4 ± 5.8 and 9.2 ± 3.5 days, respectively. Uncultured Syntrophaceae , which are possibly fermentative syntrophs of methanogens, and uncultured Kazan-3A-21 archaea also increased at the onset of methanogenesis, with FRAxC turnover times of 14.7 ± 6.9 and 10.6 ± 3.6 days. Kazan-3A-21 may therefore either perform methanogenesis or form a fermentative syntrophy with methanogens. Three genera of sulfate-reducing bacteria, Desulfovibrio , Desulfobacter , and Desulfobacterium , increased in the first 19 days before declining rapidly during sulfate reduction. We conclude that population turnover times on the order of days can be measured robustly in organic-rich marine sediment, and the transition from sulfate-reducing to methanogenic conditions stimulates

  18. ENVIRONMENTAL CHARACTERISTICS AFFECTING REDUCTIVE TRANSFORMATION OF ORGANIC POLLUTANTS IN ANOXIC SEDIMENTS

    Science.gov (United States)

    Reductive transformations are important processes for determining the fate of organic pollutants in anoxic environments. These processes are most often microbially mediated by both direct and indirect means. For example, specific bacteria transform organic pollutants directly as ...

  19. Uranium isotope evidence for an expansion of marine anoxia during the end-Triassic extinction

    Science.gov (United States)

    Jost, Adam B.; Bachan, Aviv; van de Schootbrugge, Bas; Lau, Kimberly V.; Weaver, Karrie L.; Maher, Kate; Payne, Jonathan L.

    2017-08-01

    The end-Triassic extinction coincided with an increase in marine black shale deposition and biomarkers for photic zone euxinia, suggesting that anoxia played a role in suppressing marine biodiversity. However, global changes in ocean anoxia are difficult to quantify using proxies for local anoxia. Uranium isotopes (δ238U) in CaCO3 sediments deposited under locally well-oxygenated bottom waters can passively track seawater δ238U, which is sensitive to the global areal extent of seafloor anoxia due to preferential reduction of 238U(VI) relative to 235U(VI) in anoxic marine sediments. We measured δ238U in shallow-marine limestones from two stratigraphic sections in the Lombardy Basin, northern Italy, spanning over 400 m. We observe a ˜0.7‰ negative excursion in δ238U beginning in the lowermost Jurassic, coeval with the onset of the initial negative δ13C excursion and persisting for the duration of subsequent high δ13C values in the lower-middle Hettangian stage. The δ238U excursion cannot be realistically explained by local mixing of uranium in primary marine carbonate and reduced authigenic uranium. Based on output from a forward model of the uranium cycle, the excursion is consistent with a 40-100-fold increase in the extent of anoxic deposition occurring worldwide. Additionally, relatively constant uranium concentrations point toward increased uranium delivery to the oceans from continental weathering, which is consistent with weathering-induced eutrophication following the rapid increase in pCO2 during emplacement of the Central Atlantic Magmatic Province. The relative timing and duration of the excursion in δ238U implies that anoxia could have delayed biotic recovery well into the Hettangian stage.

  20. Global diffusive fluxes of methane in marine sediments

    NARCIS (Netherlands)

    Egger, M.; Riedinger, N.; Mogollón, J.M.; Jørgensen, B.B.

    2018-01-01

    Anaerobic oxidation of methane provides a globally important, yet poorly constrained barrier for the vast amounts of methane produced in the subseafloor. Here we provide a global map and budget of the methane flux and degradation in diffusion-controlled marine sediments in relation to the depth of

  1. Diversity, Persistence and Evolution in Marine Sediments

    DEFF Research Database (Denmark)

    Starnawski, Piotr

    2016-01-01

    on the marine sediments communities was reviewed, it became apparent that there are some global trends in these populations ob- served in deep and shallow, organic rich and poor sediments. We have observed the same, often uncultured, organisms with very similar relative abundance profiles in reviewed sites...... communities as they transition from actively growing surface populations to barely dividing subsurface ones; (ii) evolutionary consequences of the prolonged residence in such environments and (iii) inferring function of the dominant groups found in deep sediments. When the current state of our knowledge....... In order to better understand this pattern we’ve reviewed the assembly processes that may lead to such situations, keeping in mind the limitations imposed by the environment.We’ve concluded, that due to low energy fluxes, and consequently low number of pos- sible cell divisions, selective survival of pre...

  2. The behavior of scavenged isotopes in marine anoxic environments: 210Pb and 210Po in the water column of the Black Sea

    International Nuclear Information System (INIS)

    Wei, C.L.; Murray, J.W.

    1994-01-01

    Vertical profiles of dissolved and particulate 210 Pb and 210 Po were determined at two stations in the Black Sea in June 1988. Vertical fluxes of 210 Pb and 210 Po were also measured in the upper 150 m, using floating sediment traps. The fractionation of 210 Pb between dissolved and particulate phases in the Black Sea is strongly influenced by the redox conditions in the water column. Dissolved 210 Pb dominates in the oxic zone, while particulate 210 Pb is the major form in the deep sulfide-rich anoxic zone. The distribution of 210 Pb across the suboxic zone appears to be mainly controlled by redox cycling of manganese and iron. In the sulfide-rich layer coprecipitation of lead with iron sulfide is probably the dominant scavenging mechanism. A simple scavenging model was used to calculate the residence times of dissolved and particulate 210 Pb in the oxic, suboxic, and anoxic zones. The residence times of dissolved 210 Pb relative to scavenging by particles are 0.5-1, 2-3, and 3.5 years in the oxic, suboxic, and anoxic layers, respectively. The corresponding residence times of particulate 210 Pb relative to particle removal processes in the same layers are 0.1, 1.5-2.5, and 8.5 years, respectively. A particle settling velocity of about 40 m y -1 was derived from the 210 Pb/ 226 Ra disequilibrium in the deep Black Sea. The relatively short residence times of 210 Pb support the hypothesis that anoxic basins are important sites for boundary scavenging of 210 Pb. The 210 Po profiles indicate that biological rather than inorganic particles are the major carrier phases for Po in the Black sea. Based on the magnitude of distribution coefficients, the relative partitioning of Pb, Po, and Th to particles found in the oxic and anoxic layers of the Black Sea are Po > Th > Pb and Po = Pb > Th, respectively. Colloidal phases may be important for the scavenging of these radionuclides

  3. Absorption of sediment-bound radionuclides through the digestive tract of marine demersal fishes

    International Nuclear Information System (INIS)

    Koyanagi, Taku; Nakahara, Motokazu; Iimura, Mitsue

    1978-01-01

    Retention of 54 Mn, 59 Fe, 60 Co and 65 Zn by marine demersal fish, Ishigarei (Kareius bicoloratus) was observed by administering sediment-bound radioisotopes orally to the fishes to elucidate the contribution of sediment to the accumulation of radionuclides by marine benthic organisms. The sediment had high distribution coefficients for these radionuclides and from the result of leaching experiments with acidified seawater, considerable fractions of radioactive Mn, Co and Zn in the sediment were assumed to be leached in the stomach of the fishes. Retention patterns of the nuclides in the whole-body of the fishes were analyzed by peeling off method and two components were obtained for all the nuclides. The parameters which characterized the retention patterns suggested relatively high absorption efficiencies of the radionuclides except 59 Fe through the digestive tract of the fishes and the retention patterns of the slower component were supposed to be similar to those observed for the nuclides taken up from seawater or food by the dishes. Rapid and higher transfer of the absorbed radionuclides to the particular organs of the fishes suggested the important role of the sediment in the radioactive contamination of marine demersal fishes. (author)

  4. Global distribution of radiolytic H2 production in marine sediment and implications for subsurface life

    Science.gov (United States)

    Sauvage, J.; Flinders, A. F.; Spivack, A. J.; D'Hondt, S.

    2017-12-01

    We present the first global estimate of radiolytic H2production in marine sediment. Knowledge of microbial electron donor production rates is critical to understand the bioenergetics of Earth's subsurface ecosystems In marine sediment, radiolysis of water by radiation from naturally occurring radionuclides leads to production of reduced (H2) and oxidized (H2O2, O2) species. Water radiolysis is catalyzed by marine sediment. The magnitude of catalysis depends on sediment composition and radiation type. Deep-sea clay is especially effective at enhancing H2 yields, increasing yield by more than an order of magnitude relative to pure water. This previously unrecognized catalytic effect of geological materials on radiolytic H2 production is important for fueling microbial life in the subseafloor, especially in sediment with high catalytic power. Our estimate of radiolytic H2 production is based on spatially integrating a previously published model and uses (i) experimentally constrained radiolytic H2 yields for the principal marine sediment types, (ii) bulk sediment radioactive element content of sediment cores in three ocean basins (N. Atlantic, N. and S. Pacific), and global distributions of (iii) seafloor lithology, (iv) sediment porosity, and (v) sediment thickness. We calculate that global radiolytic H2 production in marine sediment is 1.6E+12 mol H2 yr-1. This production rate is small relative to the annual rate of photosynthetic organic-matter production in the surface ocean. The globally integrated ratio of radiolytic H2 production relative to photosynthetic primary production is 4.1E-4, based on electron equivalences. Although small relative to global photosynthetic biomass production, sediment-catalyzed production of radiolytic products is significant in the subseafloor. Our analysis of 9 sites in the N. Atlantic, N. and S. Pacific suggests that H2 is the primary microbial fuel in organic-poor sediment older than a few million years; at these sites, calculated

  5. Climate oscillations reflected within the microbiome of Arabian Sea sediments

    KAUST Repository

    Orsi, William D.; Coolen, Marco J. L.; Wuchter, Cornelia; He, Lijun; More, Kuldeep D.; Irigoien, Xabier; Chust, Guillem; Johnson, Carl; Hemingway, Jordon D.; Lee, Mitchell; Galy, Valier; Giosan, Liviu

    2017-01-01

    Selection of microorganisms in marine sediment is shaped by energy-yielding electron acceptors for respiration that are depleted in vertical succession. However, some taxa have been reported to reflect past depositional conditions suggesting they have experienced weak selection after burial. In sediments underlying the Arabian Sea oxygen minimum zone (OMZ), we performed the first metagenomic profiling of sedimentary DNA at centennial-scale resolution in the context of a multi-proxy paleoclimate reconstruction. While vertical distributions of sulfate reducing bacteria and methanogens indicate energy-based selection typical of anoxic marine sediments, 5–15% of taxa per sample exhibit depth-independent stratigraphies indicative of paleoenvironmental selection over relatively short geological timescales. Despite being vertically separated, indicator taxa deposited under OMZ conditions were more similar to one another than those deposited in bioturbated intervals under intervening higher oxygen. The genomic potential for denitrification also correlated with palaeo-OMZ proxies, independent of sediment depth and available nitrate and nitrite. However, metagenomes revealed mixed acid and Entner-Dourdoroff fermentation pathways encoded by many of the same denitrifier groups. Fermentation thus may explain the subsistence of these facultatively anaerobic microbes whose stratigraphy follows changing paleoceanographic conditions. At least for certain taxa, our analysis provides evidence of their paleoenvironmental selection over the last glacial-interglacial cycle.

  6. Climate oscillations reflected within the microbiome of Arabian Sea sediments

    KAUST Repository

    Orsi, William D.

    2017-07-14

    Selection of microorganisms in marine sediment is shaped by energy-yielding electron acceptors for respiration that are depleted in vertical succession. However, some taxa have been reported to reflect past depositional conditions suggesting they have experienced weak selection after burial. In sediments underlying the Arabian Sea oxygen minimum zone (OMZ), we performed the first metagenomic profiling of sedimentary DNA at centennial-scale resolution in the context of a multi-proxy paleoclimate reconstruction. While vertical distributions of sulfate reducing bacteria and methanogens indicate energy-based selection typical of anoxic marine sediments, 5–15% of taxa per sample exhibit depth-independent stratigraphies indicative of paleoenvironmental selection over relatively short geological timescales. Despite being vertically separated, indicator taxa deposited under OMZ conditions were more similar to one another than those deposited in bioturbated intervals under intervening higher oxygen. The genomic potential for denitrification also correlated with palaeo-OMZ proxies, independent of sediment depth and available nitrate and nitrite. However, metagenomes revealed mixed acid and Entner-Dourdoroff fermentation pathways encoded by many of the same denitrifier groups. Fermentation thus may explain the subsistence of these facultatively anaerobic microbes whose stratigraphy follows changing paleoceanographic conditions. At least for certain taxa, our analysis provides evidence of their paleoenvironmental selection over the last glacial-interglacial cycle.

  7. D/H Ratios of Marine Lipids from Santa Barbara Basin Sediments

    Science.gov (United States)

    Li, C.; Sessions, A.; Kinnaman, F.; Valentine, D.

    2006-12-01

    With the early successful application of compound-specific D/H analyses to reconstructing paleoclimate records, most subsequent research has focused on understanding organic D/H fractionations in terrestrial environments. Thus we still know very little about natural D/H variations in lipids derived from marine organisms, or indeed if any such variations exist. We have therefore conducted an extensive survey of lipid δD values in two sediment cores collected in the Santa Barbara Basin. These data allow us to examine 1) variations between the lipid products of different organisms, 2) down-core variations due to diagenesis, and 3) differences between sediments deposited under oxic or anoxic bottom-water conditions. Our results show that considerable D/H variability between different marine products does exist. δD values of n-alkanes (except n-C35) ranged from -94 to -175 ‰, and exhibit a systematic offset between odd and even carbon numbers. The δD value of n-C35 is anomalous at -220‰. Isotopic compositions of n-alkanols range from -126 to -221 , with a pattern of progressive D depletion with chain length observed for free alcohols. δD values of sterols range from -215 to -309‰, and show no systematic variation with carbon number. However, offsets do exist between the saturated, monounsaturated, and diunsaturated sterols. Sterols as a group are strongly depleted in D relative to the bacterial-derived hopanols (-166 to -232‰), suggesting possible differences in biosynthetic fractionations by bacteria and eukaryotes. Phytol and phytane δD values roughly ranged from -360 to -410‰, while phytanol was systematically enriched at -300 to -340‰. Fatty acids encompassed much greater variability, with dD values ranging from -55 to -270‰. In general, saturated fatty acids are enriched in D relative to their unsaturated analogs, and long-chain (>C24) acids are enriched in D relative to short-chain (

  8. Energy Gradients Structure Microbial Communities Across Sediment Horizons in Deep Marine Sediments of the South China Sea

    Science.gov (United States)

    Graw, Michael F.; D'Angelo, Grace; Borchers, Matthew; Thurber, Andrew R.; Johnson, Joel E.; Zhang, Chuanlun; Liu, Haodong; Colwell, Frederick S.

    2018-01-01

    The deep marine subsurface is a heterogeneous environment in which the assembly of microbial communities is thought to be controlled by a combination of organic matter deposition, electron acceptor availability, and sedimentology. However, the relative importance of these factors in structuring microbial communities in marine sediments remains unclear. The South China Sea (SCS) experiences significant variability in sedimentation across the basin and features discrete changes in sedimentology as a result of episodic deposition of turbidites and volcanic ashes within lithogenic clays and siliceous or calcareous ooze deposits throughout the basin's history. Deep subsurface microbial communities were recently sampled by the International Ocean Discovery Program (IODP) at three locations in the SCS with sedimentation rates of 5, 12, and 20 cm per thousand years. Here, we used Illumina sequencing of the 16S ribosomal RNA gene to characterize deep subsurface microbial communities from distinct sediment types at these sites. Communities across all sites were dominated by several poorly characterized taxa implicated in organic matter degradation, including Atribacteria, Dehalococcoidia, and Aerophobetes. Sulfate-reducing bacteria comprised only 4% of the community across sulfate-bearing sediments from multiple cores and did not change in abundance in sediments from the methanogenic zone at the site with the lowest sedimentation rate. Microbial communities were significantly structured by sediment age and the availability of sulfate as an electron acceptor in pore waters. However, microbial communities demonstrated no partitioning based on the sediment type they inhabited. These results indicate that microbial communities in the SCS are structured by the availability of electron donors and acceptors rather than sedimentological characteristics. PMID:29696012

  9. Massive Expansion of Marine Archaea During The Early Albian Oceanic Anoxic Event 1B

    Science.gov (United States)

    Kuypers, M. M.; Kuypers, M. M.; Blokker, P.; Erbacher, J.; Kinkel, H.; Pancost, R. D.; Pancost, R. D.; Schouten, S.; Sinninghe Damsté, J. S.

    2001-12-01

    Oceanic anoxic events (OAEs), periods of globally enhanced burial of organic matter (OM) in the marine realm, played an important role in the mid-Cretaceous `greenhouse climate' by effectively reducing atmospheric carbon dioxide concentrations. It is generally believed that these OAEs were caused either by decreased remineralisation or increased production of phytoplanktonic OM. Here we show that enhanced organic carbon (OC) burial during the early Albian OAE1b (~112 My) was caused by a different process. Combined biogeochemical and stable carbon isotopic analyses indicate that black shales from this period contain up to 80% of OC derived from archaea. Archaea-derived isoprenoidal tetraether membrane lipids and free and macromolecularly bound isoprenoid alkanes are abundantly present in these black shales. More specifically the presence of certain ether lipids (cyclic biphytane tetraethers) indicates representatives of the pelagic archaea. To the best of our knowledge this is the earliest fossil evidence for marine planktonic archaea, extending their geological record by more than 60 million years. The diversity of archaeal lipids recovered from the OAE1b black shales suggests that they derive from a multitude of archaeal species. However, the specific 13C enrichment of all such lipids indicates a common `heavy' (13C-rich) carbon source for the archaea and/or a common pathway of carbon-fixation with a reduced 13C fractionation effect compared to the Calvin cycle used by algae, cyanobacteria and higher plants. The large differences (up to 12%) in 13C/12C ratios between the algal biomarkers and the much more abundant archaeal molecular fossils suggest that the latter were not living heterotrophically on photoautotrophic biomass. It seems likely that the archaea present during OAE1b used a chemical energy source (possibly ammonium) for carbon fixation since photoautotrophy within the domain of the Archaea is restricted to only a few species from hypersaline

  10. Evaluation of the potential for using Greenlandic marine sediments for brick production

    DEFF Research Database (Denmark)

    Belmonte, Louise Josefine; Bertelsen, Ida Maria Gieysztor

    2016-01-01

    Fine grained marine sediments from near the Greenlandic towns of Ilulissat, Kangerlussuaq and Sisimiut were assessed as raw materials for local production of building bricks. The assessment included both analysis of the sediment characteristics and physical properties of miniature test brick...

  11. Solidification/stabilization of dredged marine sediments for road construction.

    Science.gov (United States)

    Wang, Dong Xing; Abriak, Nor Edine; Zentar, Rachid; Xu, WeiYa

    2012-01-01

    Cement/lime-based solidification is an environmentally sound solution for the management of dredged marine sediments, instead of traditional solutions such as immersion. Based on the mineralogical composition and physical characteristics of Dunkirk sediments, the effects of cement and lime are assessed through Atterberg limits, modified Proctor compaction, unconfined compressive strength and indirect tensile strength tests. The variation of Atterberg limits and the improvement in strength are discussed at different binder contents. The potential of sediments solidified with cement or lime for road construction is evaluated through a proposed methodology from two aspects: I-CBR value and material classification. The test results show the feasibility of solidified dredged sediments for beneficial use as a material in road construction. Cement is superior to lime in terms of strength improvement, and adding 6% cement is an economic and reasonable method to stabilize fine sediments.

  12. Long distance electron transport in marine sediments: Microbial and geochemical implications

    DEFF Research Database (Denmark)

    Risgaard-Petersen, Nils; Larsen, Steffen; Pfeffer, Christian

    and promotes the formation of Mg-calcite and iron oxides in the oxic zone. Oxygen seems to be the major electron acceptor, and more than 40% of the oxygen consumption in sediments can be driven by long distance electron transfer from distant electron donors. The major e-donor is sulfide, which is oxidized......Anaerobic oxidation of organic matter in marine sediment is traditionally considered to be coupled to oxygen reduction via a cascade of redox processes and transport of intermittent electron donors and acceptors. Electric currents have been found to shortcut this cascade and directly couple...... oxidation of sulphide centimeters down in marine sediment to the reduction of oxygen at the very surface1 . This electric coupling of spatially separated redox half-reactions seems to be mediated by centimeter long filamentous Desulfubulbus affiliated bacteria with morphological and ultra...

  13. Spheroidal Carbonaceous Particles (SCPs) as Chronological Markers in Marine Sediments

    Science.gov (United States)

    Thornalley, D.; Rose, N.; Oppo, D.

    2016-12-01

    Spheroidal carbonaceous particles (SCPs) are a component of fly-ash, the particulate by-product of industrial high-temperature combustion of coal and fuel-oil that is released to the atmosphere with flue-gases. They are morphologically distinct and have no natural sources making them unambiguous markers of contamination from these anthropogenic sources. In naturally accumulating archives, SCPs may be used as a chronological tool as they provide a faithful record of industrial emissions and deposition. While the timing of the first presence of SCP in the 19th century, and the observed sub-surface peak are dependent on factors such as sediment accumulation rates and local industrial history, a rapid increase in SCP inputs in the mid-20thcentury appears to be a global signal corresponding to an acceleration in global electricity demand following the Second World War and the use of fuel-oil in electricity production at an industrial scale for the first time. While this approach has been widely used in lake sediments, it has not been applied to marine sediments, although there is great potential. Improved dating of 19th-20th century marine sediments has particular relevance for developing reconstructions of recent multi-decadal climate and ocean variability, and for studies that aim to place 20thcentury climate change within the context of the last millennium. Here, we present data from three sediment cores from the continental slope south of Iceland to demonstrate the temporal and spatial replicability of the SCP record in the marine environment and compare these data with cores taken from more contaminated areas off the coast of the eastern United States. The improved age model constraints provided by the analysis of SCPs has enabled a more accurate assessment of the timing of recent abrupt climate events recorded in these archives and has thus improved our understanding of likely causal climate mechanisms.

  14. Burrowing and avoidance behaviour in marine organisms exposed to pesticide-contaminated sediment

    DEFF Research Database (Denmark)

    Møhlenberg, Flemming; Kiørboe, Thomas

    1983-01-01

    Behavioural effects of marine sediment contaminated with pesticides (6000 ppm parathion, 200 ppm methyl parathion, 200 ppm malathion) were studied in a number of marine organisms in laboratory tests and in situ. The burrowing behaviour in Macoma baltica, Cerastoderma edule, Abra alba, Nereis...

  15. Origin and geochemical behavior of uranium in marine sediments. Utilization of the {sup 234}U/{sup 238}U ratio in marine geochemistry; Origine et comportement geochimique de l`uranium dans les sediments marins. Utilisation du rapport ({sup 234}U/{sup 238}U) en geochimie marine

    Energy Technology Data Exchange (ETDEWEB)

    Organo, Catherine [Paris-11 Univ., 91 - Orsay (France)

    1997-01-20

    The first part of this thesis presents the current situation of knowledge of uranium in marine environment. The second part describes the methods of analysis as well as the material support of the study, i.e., the sediments and marine deposits investigated. The third part is dedicated to the study of uranium mobility in marine sediments characterized by detrital terrigenous composition (pelagic clays). This approach allowed quantifying the entering and leaving flux of uranium after the sediment settling and, to discuss, on this basis, the consequences on the uranium oceanic balance. In the third part the origin and behavior of uranium in zones of high surface productivity is studied. The uranium enrichments observed in the hemi-pelagic sediments of the EUMELI (J.G.O.F.S.-France) programme will constitute a material of study adequate for measuring the variations in the {sup 234}U/2{sup 38U} ratio in solid phase, in response to the oxido-reducing characteristics of the sediment. Thus establishing the origin of the trapped uranium has been possible. Also, the nature of the sedimentary phases related to uranium in bio-genetic sediments in the Austral Ocean was determined. Thus a relationship between the variations in the {sup 234}U/{sup 238} and the diagenetic transformations was possible to establish. Finally in the fifth part a study of the behavior of uranium in a polymetallic shell characteristic for deposits of hydrogenized origin 146 refs., 57 figs., 23 tabs.

  16. Role of Diatoms in the Spatial-Temporal Distribution of Intracellular Nitrate in Intertidal Sediment

    DEFF Research Database (Denmark)

    Stief, P.; Kamp, A.; de Beer, D.

    2013-01-01

    Intracellular nitrate storage allows microorganisms to survive fluctuating nutrient availability and anoxic conditions in aquatic ecosystems. Here we show that diatoms, ubiquitous and highly abundant microalgae, represent major cellular reservoirs of nitrate in an intertidal flat of the German Wa...... in anaerobic nitrate respiration. Due to the widespread dominance of diatoms in microphytobenthos, the total nitrate pool in coastal marine sediments may generally be at least two times larger than derived from porewater measurements and partially be recycled to ammonium....

  17. Marinicella sediminis sp. nov., isolated from marine sediment

    Science.gov (United States)

    A novel heterotrophic, Gram-stain-negative, aerobic, rod-shaped, pale yellow, non-motile and non-spore-forming bacterium, designated as strain F2**T, was isolated from the marine sediment collected from Weihai coastal, Shandong Province, PR China. Optimal growth occurred at 33 °C (range 10–37 °C), w...

  18. Butyltin speciation in sediments from Todos os Santos Bay (Bahia, Brazil by GC-PFPD

    Directory of Open Access Journals (Sweden)

    Juliana Feitosa Felizzola

    2008-01-01

    Full Text Available Butyltin compounds were investigated in surface sediments from 17 stations in Todos os Santos Bay. Analytical conditions for organotin determination in marine sediments were optimized for GC with pulsed flame photometric detection. Detection limits were: 5.4 µg kg-1 for TBT; 0.2 µg kg-1 for DBT; and 2.1 µg kg-1 for MBT, using a 610-nm filter. In general, TBT concentrations were low and in the range of

    anoxic conditions in the sediments. The presence of paint particles in the sediments and degradation in the water column during resuspension events followed by removal of the more soluble DBT and MBT may explain these observations.

  19. A COMPARISON OF MAJOR ELEMENTS BETWEEN MARINE SEDIMENTS AND IGNEOUS ROCKS: AS A BASIC DETERMINATION OF THE SEDIMENT SOURCE AT UJUNG PENYUSUK WATERS, NORTH BANGKA,BANGKA BELITUNG PROVINCE

    Directory of Open Access Journals (Sweden)

    Ediar Usman

    2017-07-01

    Full Text Available Three igneous rock samples from the coast and five sediments from the marine of Ujung Penyusuk Waters have been used for chemistry analysis as the basic determination of sediment source. The result of chemistry analysis shows that the major element with relatively same pattern. In the igneous rock samples, the result of chemistry analysis shows the SiO2 ranges between 72.3 - 76.8%, Al2O3 (9.64 - 11.64%, and Fe2O3 ( 2.08 - 2.18%. In the marine sediment, the content of SiO2 is between 62.2 and 66.5%, Al2O3 (2.93 - 3.63% and Fe2O3 (21.19 - 24.40%. Other elements such as CaO, MgO, K2O, Na2O and TiO2 are relatively similar values in all samples. The difference of element content in marine sediment and coastal igneous rock occurs in Al2O3 and Fe2O3. The Al2O3 is small in marine sediment while the Fe2O3 is higher compared to igneous rocks. Decreasing of the Al2O3 (kaolinite in the marine sediment is caused by the character of the Al2O3 that was derived from quartz rich of igneous rocks forming kaolinite. It was than deposited in the sea floor. Increasing of the Fe2O3 in marine sediment is caused by addition reaction of the Fe from the sea. Generally, the content of the SiO2 (quartz in igneous rock and marine sediment belongs to the same group source that is acid igneous rock. The SiO2 in the sediment belongs to a group of granitoid.

  20. Energy Gradients Structure Microbial Communities Across Sediment Horizons in Deep Marine Sediments of the South China Sea

    Directory of Open Access Journals (Sweden)

    Michael F. Graw

    2018-04-01

    Full Text Available The deep marine subsurface is a heterogeneous environment in which the assembly of microbial communities is thought to be controlled by a combination of organic matter deposition, electron acceptor availability, and sedimentology. However, the relative importance of these factors in structuring microbial communities in marine sediments remains unclear. The South China Sea (SCS experiences significant variability in sedimentation across the basin and features discrete changes in sedimentology as a result of episodic deposition of turbidites and volcanic ashes within lithogenic clays and siliceous or calcareous ooze deposits throughout the basin's history. Deep subsurface microbial communities were recently sampled by the International Ocean Discovery Program (IODP at three locations in the SCS with sedimentation rates of 5, 12, and 20 cm per thousand years. Here, we used Illumina sequencing of the 16S ribosomal RNA gene to characterize deep subsurface microbial communities from distinct sediment types at these sites. Communities across all sites were dominated by several poorly characterized taxa implicated in organic matter degradation, including Atribacteria, Dehalococcoidia, and Aerophobetes. Sulfate-reducing bacteria comprised only 4% of the community across sulfate-bearing sediments from multiple cores and did not change in abundance in sediments from the methanogenic zone at the site with the lowest sedimentation rate. Microbial communities were significantly structured by sediment age and the availability of sulfate as an electron acceptor in pore waters. However, microbial communities demonstrated no partitioning based on the sediment type they inhabited. These results indicate that microbial communities in the SCS are structured by the availability of electron donors and acceptors rather than sedimentological characteristics.

  1. Phosphorus cycling and burial in sediments of a seasonally hypoxic marine basin

    NARCIS (Netherlands)

    Sulu-Gambari, F; Hagens, M.; Behrends, T; Seitaj, D.; Meysman, F.J.R.; Middelburg, J.; Slomp, C.P.

    2018-01-01

    Recycling of phosphorus (P) from sediments contributes to the development of bottom-water hypoxia in many coastal systems. Here, we present results of a year-long assessment of P dynamics in sediments of a seasonally hypoxic coastal marine basin (Lake Grevelingen, the Netherlands) in 2012.

  2. Radiological assessment of coastal marine sediment and water samples, Karachi coast, Pakistan

    International Nuclear Information System (INIS)

    Qureshi, R.M.; Mashiatullah, A.; Akram, M.; Sajjad, M.I.; Shafiq, M.; Javed, T.; Aslam, M.

    1999-04-01

    Concentrations of selective natural radionuclides (/sup 226/Ra, /sup 228/Ra, /sup 40/K) in shallow marine coastal sediments and sea water off Karachi coast, Pakistan, were measured with a hyper pure germanium (HPGe) gamma spectrometer. Sediment and water samples were collected from polluted Layari and Malire River downstream (pre-out fall), Gizri Creek, Layari River out fall in Karachi harbor, Karachi Harbor/ Manora Channel Mains, as well as from open sea (South-East Coast and North-West Coast) within the 10m depth contour. No artificial radionuclides (e.g. /sup 60/Co, /sup 137/Cs and /sup 134/Cs were detected in both water and sediment samples at any of these locations. The activity of /sup 226/Ra in coastal river sediments is found below its limit of detection (<18.35 Bqkg/sup -1/). Activity of /sup 228/Ra in sediments off Karachi Coast ranges between 11.80 +- 3.60 to 37.27+- 4.31 Bqkg/sup -1/. The highest activity was found south of Nuclear Power Station (KANUPP) and the lowest activity was found in the vicinity of Oyster Rocks (open sea). The /sup 226/Ra activity ranges from 19.40+- 5.88 to 67.14 +- 10.02 Bqkg/sup -1/. The activity of /sup 228/Ra in sediments of Manora Channel, South-east Coast of Karachi and the North west coast of Karachi are also in agreement with the IAEA marine sediment standard namely: IAEA-135 (/sup 228/Ra = 36.7 +- 3 Bqkg/sup -1/). The activity of /sup 226/Ra for the South East Coast of Karachi and the North west coast of Karachi are also in agreement with the IAEA marine sediment standard namely: IAEA 135(/sup 226/Ra=23.9 +- 1.1 Bqkg/sup -1/) and Pacific Ocean sediment standard namely: IAEA-368 (/sup 226/Ra=21.4+- 1.1 Bqkg/sup -1/). The /sup 40/K activity in sea sediments varies from 197.7+- 44.24 to 941.90 +- 39.00 Bqkg-1). The highest activity is observed in the vicinity of Oyster Rocks (open sea) along the Clifton coast (South-East Cost of Karachi) and the lowest activity is found south of Nuclear Power Station (KANUPP) along the

  3. Origin and geochemical behavior of uranium in marine sediments. Utilization of the 234U/238U ratio in marine geochemistry

    International Nuclear Information System (INIS)

    Organo, Catherine

    1997-01-01

    The first part of this thesis presents the current situation of knowledge of uranium in marine environment. The second part describes the methods of analysis as well as the material support of the study, i.e., the sediments and marine deposits investigated. The third part is dedicated to the study of uranium mobility in marine sediments characterized by detrital terrigenous composition (pelagic clays). This approach allowed quantifying the entering and leaving flux of uranium after the sediment settling and, to discuss, on this basis, the consequences on the uranium oceanic balance. In the third part the origin and behavior of uranium in zones of high surface productivity is studied. The uranium enrichments observed in the hemi-pelagic sediments of the EUMELI (J.G.O.F.S.-France) programme will constitute a material of study adequate for measuring the variations in the 234 U/2 38U ratio in solid phase, in response to the oxido-reducing characteristics of the sediment. Thus establishing the origin of the trapped uranium has been possible. Also, the nature of the sedimentary phases related to uranium in bio-genetic sediments in the Austral Ocean was determined. Thus a relationship between the variations in the 234 U/ 238 and the diagenetic transformations was possible to establish. Finally in the fifth part a study of the behavior of uranium in a polymetallic shell characteristic for deposits of hydrogenized origin

  4. Biogenic methane potential of marine sediments. Application of chemical thermodynamics

    Energy Technology Data Exchange (ETDEWEB)

    Arning, E.T.; Schulz, H.M. [Helmholtz Centre Potsdam GFZ, Potsdam (Germany); Berk, W. van [Technical Univ. of Clausthal (Germany). Dept. of Hydrogeology

    2013-08-01

    Accumulations of biogenic methane-dominated gas are widespread and occur in a variety of depositional settings and rock types. However, the potential of biogenic methane remains underexplored. This is mainly due to the fact that quantitative assessments applying numerical modeling techniques for exploration purposes are generally lacking to date. Biogenic methane formation starts in relatively shallow marine sediments below the sulfate reduction zone. When sulfate is exhausted, methanogenesis via the CO{sub 2} reduction pathway is often the dominant biogenic methane formation process in marine sediments (Claypool and Kaplan, 1974). The process can be simplified by the reaction: 2CH{sub 2}O + Ca{sup 2+} + H{sub 2}O {yields} CH{sub 4} + CaCO{sub 3} + 2H{sup +}. The products of early diagenetic reactions initiate coupled equilibrium reactions that induce a new state of chemical equilibrium among minerals, pore water and gas. The driving force of the complex biogeochemical reactions in sedimentary environments during early diagenesis is the irreversible redox-conversion of organic matter. Early diagenetic formation of biogenic methane shortly after deposition ('early diagenesis') was retraced using PHREEQC computer code that is applied to calculate homogenous and heterogeneous mass-action equations in combination with one-dimensional diffusion driven transport (Parkhurst and Appelo, 1999). Our modeling approach incorporates interdependent diagenetic reactions evolving into a diffusive multi-component and multiphase system by means of thermodynamic equilibrium calculations of species distribution (Arning et al., 2011, 2012, 2013). Reaction kinetics of organic carbon conversion is integrated into the set of equilibrium reactions by defining type and amount of converted organic matter in a certain time step. It is the aim (1) to calculate quantitatively thermodynamic equilibrium conditions (composition of pore water, mineral phase and gas phase assemblage) in

  5. Intense molybdenum accumulation in sediments underneath a nitrogenous water column and implications for the reconstruction of paleo-redox conditions based on molybdenum isotopes

    Science.gov (United States)

    Scholz, Florian; Siebert, Christopher; Dale, Andrew W.; Frank, Martin

    2017-09-01

    The concentration and isotope composition of molybdenum (Mo) in sediments and sedimentary rocks are widely used proxies for anoxic conditions in the water column of paleo-marine systems. While the mechanisms leading to Mo fixation in modern restricted basins with anoxic and sulfidic (euxinic) conditions are reasonably well constrained, few studies have focused on Mo cycling in the context of open-marine anoxia. Here we present Mo data for water column particulate matter, modern surface sediments and a paleo-record covering the last 140,000 years from the Peruvian continental margin. Mo concentrations in late Holocene and Eemian (penultimate interglacial) shelf sediments off Peru range from ∼70 to 100 μg g-1, an extent of Mo enrichment that is thought to be indicative of (and limited to) euxinic systems. To investigate if this putative anomaly could be related to the occasional occurrence of sulfidic conditions in the water column overlying the Peruvian shelf, we compared trace metal (Mo, vanadium, uranium) enrichments in particulate matter from oxic, nitrate-reducing (nitrogenous) and sulfidic water masses. Coincident enrichments of iron (Fe) (oxyhydr)oxides and Mo in the nitrogenous water column as well as co-variation of dissolved Fe and Mo in the sediment pore water suggest that Mo is delivered to the sediment surface by Fe (oxyhydr)oxides. Most of these precipitate in the anoxic-nitrogenous water column due to oxidation of sediment-derived dissolved Fe with nitrate as a terminal electron acceptor. Upon reductive dissolution in the surface sediment, a fraction of the Fe and Mo is re-precipitated through interaction with pore water sulfide. The Fe- and nitrate-dependent mechanism of Mo accumulation proposed here is supported by the sedimentary Mo isotope composition, which is consistent with Mo adsorption onto Fe (oxyhydr)oxides. Trace metal co-variation patterns as well as Mo and nitrogen isotope systematics suggest that the same mechanism of Mo delivery

  6. A statistical approach to the interpretation of aliphatic hydrocarbon distributions in marine sediments

    Science.gov (United States)

    Rapp, J.B.

    1991-01-01

    Q-mode factor analysis was used to quantitate the distribution of the major aliphatic hydrocarbon (n-alkanes, pristane, phytane) systems in sediments from a variety of marine environments. The compositions of the pure end members of the systems were obtained from factor scores and the distribution of the systems within each sample was obtained from factor loadings. All the data, from the diverse environments sampled (estuarine (San Francisco Bay), fresh-water (San Francisco Peninsula), polar-marine (Antarctica) and geothermal-marine (Gorda Ridge) sediments), were reduced to three major systems: a terrestrial system (mostly high molecular weight aliphatics with odd-numbered-carbon predominance), a mature system (mostly low molecular weight aliphatics without predominance) and a system containing mostly high molecular weight aliphatics with even-numbered-carbon predominance. With this statistical approach, it is possible to assign the percentage contribution from various sources to the observed distribution of aliphatic hydrocarbons in each sediment sample. ?? 1991.

  7. The onset of fabric development in deep marine sediments

    NARCIS (Netherlands)

    Maffione, Marco; Morris, Antony

    2017-01-01

    Post-depositional compaction is a key stage in the formation of sedimentary rocks that results in porosity reduction, grain realignment and the production of sedimentary fabrics. The progressive time-depth evolution of the onset of fabric development in deep marine sediments is poorly constrained

  8. Effect of Suez Canal Marine Sediment on Sorption of Cesium

    International Nuclear Information System (INIS)

    Hassan, H.B.

    2016-01-01

    Suez Canal is surrounded by navigation, industrial, agricultural activities and suffers from high rate of population growth that discharging waste into Suez Canal. The Suez Canal coastal waters are influenced by a complex variety of physical, geochemical and biological processes, which influence the behavior, transport and fate of containments released into the marine environment. Sorption of releasing containment such as cesium in Suez Canal water is investigated because of its toxic effect on the marine environment. The object of present study is to determine the effects some of physical and chemical characteristics of collected sediment samples from the three important locations on Suez Canal (Suez Bay, Bitter Lakes and El- Temsah Lake beaches) on sorption behavior of cesium by using batch experiment. Batch experiment was used to study the sorption of the cesium ion. The sorption process is dependent on mineral constituents of Suez Canal sediment and their characteristics. Analytical methods which included particle size and X-ray diffraction (XRD) analyses found that particle size of Suez Canal sediment samples is characterized by sand to fine sand and quartz is the main mineralogical species. Distribution coefficient (K d ) which represent geochemical processes and particle size of these sediment samples effect on the degree of cesium sorption to the sediment. Also (K d ) increase with increase cation exchangeable capacity (CEC). The Suez Canal sediment samples have low (K d ) values which effected by their physical and chemical properties. Sample (2) has highest distribution coefficient (K d ) between measured samples due to containing ratio 30% of fine sand and high ratio of organic matter.

  9. Polychlorinated naphthalenes (PCNs) in riverine and marine sediments of the Laizhou Bay area, North China

    International Nuclear Information System (INIS)

    Pan Xiaohui; Tang Jianhui; Chen Yingjun; Li Jun; Zhang Gan

    2011-01-01

    PCN congeners were analyzed in marine and riverine sediments of the Laizhou Bay area, North China. Concentrations of PCNs ranged from 0.12 to 5.1 ng g -1 dry weight (dw) with a mean value of 1.1 ng g -1 dw. The levels of PCNs varied largely, with industrial group approximately ten folds higher than those of the rural in riverine sediment. A strong impact by direct discharge from local factories was suggested. Similar compositional profiles were found within groups. High resemblance of compositional profiles between industrial samples and Halowax 1014 was observed. It was indicated that PCNs in riverine sediments were mainly from release of industrial usage, with additional contributions from industrial thermal process at certain sites. In marine sediments, it was suggested that PCNs along the coast of Laizhou Bay were mainly controlled by riverine input. While in the central bay, PCN distributions were possibly impacted by combined multiple factors. - Highlights: → We investigated the PCN levels both in the riverine and marine surface sediments of Laizhou Bay. → PCN concentrations in the river sediments of industrial group were ten times higher than in the rural group. → Leakage from industrial materials and thermal processes were the major sources. → PCNs in the coastal sites were more influenced by the river discharge. → In the centre bay, PCN distributions were possibly impacted by combined multiple factors. - A systematic sampling of riverine and marine sediments was conducted in Laizhou Bay area to investigate the distribution and possible sources of PCNs.

  10. Hydrocarbon-degrading sulfate-reducing bacteria in marine hydrocarbon seep sediments

    OpenAIRE

    Kleindienst, Sara

    2012-01-01

    Microorganisms are key players in our biosphere because of their ability to degrade various organic compounds including a wide range of hydrocarbons. At marine hydrocarbon seeps, more than 90% of sulfate reduction (SR) is potentially coupled to non-methane hydrocarbon oxidation. Several hydrocarbon-degrading sulfate-reducing bacteria (SRB) were enriched or isolated from marine sediments. However, in situ active SRB remained largely unknown. In the present thesis, the global distribution and a...

  11. Determination of multi-element in marine sediment samples collected in Angola by the k0-NAA technique

    International Nuclear Information System (INIS)

    Teixeira, M.C.P.; Ho Manh Dung; Cao Dong Vu; Nguyen Thi Sy; Nguyen Thanh Binh; Vuong Huu Tan

    2006-01-01

    The marine sediment samples were designed to collect in Angola for marine environmental pollution study. The k 0 -standardization method of neutron activation analysis (k 0 -NAA) on Dalat research reactor has been developed to determine of multi-element in the Angola marine sediment samples. The samples were irradiated in cell 7-1 for short- and middle-lived nuclides and rotary specimen rack for long-lived nuclides. The irradiation facilities were characterized for neutron spectrum parameters and post-activated samples were measured on the calibrated gamma-ray spectrometers using HPGe detectors. The analytical results for 9 marine sediment samples with 27 elements: Al, As, Br, Ca, Ce,Cl, Co, Cs, Dy, Fe, Hf, I, K, Mg, Mn, Na, Rb, Sb, Sc, Se, Sm, Th, Ti, U, V and Zn in term of mean concentration, standard deviation and their content range are shown in the report. The analytical quality assurance was done by analysis of a Japan's certified reference material namely marine sediment NMIJ-CRM-7302a. These preliminary results revealed that the k 0 -NAA technique on the Dalat research reactor is a good analytical technique for determination of multi-element in the marine sediment samples. Some heavy metals and trace elements determined in this work possibly connected to the human activities at the sampling region. (author)

  12. Mechanical response of marine sediments resulting from isolation of radioactive wastes

    International Nuclear Information System (INIS)

    Dawson, P.R.

    1979-01-01

    Preliminary analyses of canister movement rsulting from thermally induced density gradients have been performed using a creeping viscoplastic flow model in conjunction with a creep equation evaluated from literature data for fine-grained clay. The stress levels predicted are quite low relative to the sediment quasi-static strength indicating that creep testing of marine sediments at very low stress is necessary. 4 figures

  13. Distribution of uranium in marine sediments

    International Nuclear Information System (INIS)

    Ordonez R, E.; Ramirez T, J.J.; Lopez M, J.; Aspiazu, J.; Ruiz F, A.C.; Valero C, N.

    2008-01-01

    The marine sediments obtained by means of a sampling nucleus in the Gulf of Tehuantepec, Mexico, they have been object of crystallographic and morphological characterization. The PIXE analysis of some samples in study is shown. The normal methodology to carry out the alpha spectroscopy indicates that the sample should be dissolved, but due to the nature of the marine sediments, it thinks about the necessity to make a fractional separation of the sample components. In each stratum of the profile it separates the organic part and the mineral to recover the uranium. It was observed that in the organic phase, the uranium is in two oxidation states (IV and Vl), being necessary the radiochemical separation with a liquid/liquid column chromatographic that uses the di-2-ethyl hexyl phosphoric acid as stationary phase. The uranium compounds extracts are electrodeposited in fine layers on stainless steel disks to carry out the analysis by alpha spectroscopy. The spectroscopic analysis of the uranium indicates us that for each stratum one has a difference marked in the quotient of activities of 234 U/ 238 U that depends on the nature of the studied fraction. These results give us a clear idea about how it is presented the effect of the uranium migration and other radioelements in the biosphere, with what we can determine which are the conditions in that these have their maximum mobility and to know their diffusion patterns in the different media studied. (Author)

  14. Algal and archaeal polyisoprenoids in a recent marine sediment

    DEFF Research Database (Denmark)

    Bian, Liangqiao; Hinrichs, Kai-Uwe; Xie, Tianmin

    2001-01-01

    Analyses of C-13 contents of individual organic molecules in a marine sediment show that crocetane, 2,6,11,15-tetramethylhexadecane, an isomer of phytane, is produced by microorganisms that use methane as their main source of carbon. The sediments lie at a water depth of 68 m in the Kattegat......, the strait between Denmark and Sweden. Crocetane appears first 185 cm below the sediment-water interface, in the zone marking the transition from sulfate reduction to methanogenesis. Its delta C-13 value is -90 +/- 10 parts per thousand versus Vienna Pee Dee Belemnite (VPDB). Its structure, which includes......-consuming member of the microbial consortium responsible for the anaerobic oxidation of methane [Hoehler et al., 1994], in which, as first demonstrated quantitatively in these sediments [Iversen and Jorgensen, 1985], electrons are transferred from methane to sulfate. The presence of archaeal biomass throughout...

  15. Degradation of Herbicides in the Tropical Marine Environment: Influence of Light and Sediment.

    Science.gov (United States)

    Mercurio, Philip; Mueller, Jochen F; Eaglesham, Geoff; O'Brien, Jake; Flores, Florita; Negri, Andrew P

    2016-01-01

    Widespread contamination of nearshore marine systems, including the Great Barrier Reef (GBR) lagoon, with agricultural herbicides has long been recognised. The fate of these contaminants in the marine environment is poorly understood but the detection of photosystem II (PSII) herbicides in the GBR year-round suggests very slow degradation rates. Here, we evaluated the persistence of a range of commonly detected herbicides in marine water under field-relevant concentrations and conditions. Twelve-month degradation experiments were conducted in large open tanks, under different light scenarios and in the presence and absence of natural sediments. All PSII herbicides were persistent under control conditions (dark, no sediments) with half-lives of 300 d for atrazine, 499 d diuron, 1994 d hexazinone, 1766 d tebuthiuron, while the non-PSII herbicides were less persistent at 147 d for metolachlor and 59 d for 2,4-D. The degradation of herbicides was 2-10 fold more rapid in the presence of a diurnal light cycle and coastal sediments; apart from 2,4-D which degraded more slowly in the presence of light. Despite the more rapid degradation observed for most herbicides in the presence of light and sediments, the half-lives remained > 100 d for the PS II herbicides. The effects of light and sediments on herbicide persistence were likely due to their influence on microbial community composition and its ability to utilise the herbicides as a carbon source. These results help explain the year-round presence of PSII herbicides in marine systems, including the GBR, but more research on the transport, degradation and toxicity on a wider range of pesticides and their transformation products is needed to improve their regulation in sensitive environments.

  16. The microbial nitrogen cycling potential in marine sediments is impacted by polyaromatic hydrocarbon pollution

    Directory of Open Access Journals (Sweden)

    Nicole M Scott

    2014-03-01

    Full Text Available During petroleum hydrocarbon exposure the composition and functional dynamics of marine microbial communities are altered, favoring bacteria that can utilize this rich carbon source. Initial exposure of high levels of hydrocarbons in aerobic surface sediments can enrich growth of heterotrophic microorganisms having hydrocarbon degradation capacity. As a result, there can be a localized reduction in oxygen potential, if the sediments are aerobic, within the surface layer of marine sediments resulting in anaerobic zones. We hypothesized that increasing exposure to elevated hydrocarbon concentrations would positively correlate with an increase in denitrification processes and the net accumulation of dinitrogen. This hypothesis was tested by comparing the relative abundance of genes associated with nitrogen metabolism and nitrogen cycling identified in 6 metagenomes from sediments contaminated by polyaromatic hydrocarbons from the Deepwater Horizon oil spill in the Gulf of Mexico, and 3 metagenomes from sediments associated with natural oil seeps in the Santa Barbara Channel. An additional 8 metagenomes from uncontaminated sediments from the Gulf of Mexico were analyzed for comparison. We predicted relative changes in metabolite turnover as a function of the differential microbial gene abundances, which showed predicted accumulation of metabolites associated with denitrification processes, including anammox, in the contaminated samples compared to uncontaminated sediments, with the magnitude of this change being positively correlated to the hydrocarbon concentration and exposure duration. These data highlight the potential impact of hydrocarbon inputs on N cycling processes in marine sediments and provide information relevant for system scale models of nitrogen metabolism in affected ecosystems.

  17. Transformation of PBDE mixtures during sediment transport and resuspension in marine environments (Gulf of Lion, NW Mediterranean Sea)

    International Nuclear Information System (INIS)

    Salvadó, Joan A.; Grimalt, Joan O.; López, Jordi F.; Durrieu de Madron, Xavier; Heussner, Serge; Canals, Miquel

    2012-01-01

    Polybromodiphenyl ethers (PBDEs) in superficial sediments from the Gulf of Lion were studied. They were largely predominated by BDE 209 (98.7% of all PBDEs) indicating that the main source of these pollutants was the commercial mixture deca-BDE. This compound and the less brominated BDE exhibited a southwestward decreasing concentration gradient following the dominant marine currents and bottom relief, e.g. the Mud Belt, the submarine canyons and the Open Continental Slope. All PBDEs exhibited statistically significant correlations confirming the common origin. However, a progressive transformation of the dumped BDE 209 was identified showing a depletion paralleled by increases of the less brominated BDEs (from 8.6% to 22%). These less brominated compounds were accumulated at about 100–140 km away from the Rhone prodelta, e.g. at the end of the submarine canyons, evidencing that these transformation compounds can be accumulated at long distances from the dumping sites in the marine system. Highlights: ► Polybromodiphenyl ethers are associated to organic carbon in marine sediments. ► PBDEs in marine sediments can accumulate further away than 140 km from the spill site. ► BDE-209 in marine sediments generate congeners found in banned commercial mixtures. ► BDE-209 in marine sediments generates new congeners not found in commercial mixtures. ► Submarine canyons channel PBDEs from the continental platform to the deep shelf. - Decomposition of decabromodiphenyl ether in marine sediments generates congeners found in banned mixtures in areas located far away from the discharge sites.

  18. Constraints on the sources of branched tetraether membrane lipids in distal marine sediments

    NARCIS (Netherlands)

    Weijers, J.W.H.; Schefuß, E.; Kim, J.-H.; Sinninghe Damsté, J.; Schouten, S.

    2014-01-01

    Branched glycerol dialkyl glycerol tetraethers (brGDGTs) are membrane lipids produced by soil bacteria and occur in near coastal marine sediments as a result of soil organic matter input. Their abundance relative to marine-derived crenarchaeol, quantified in the BIT index, generally decreases

  19. Plio-Pleistocene imprint of natural climate cycles in marine sediments

    Energy Technology Data Exchange (ETDEWEB)

    Lebreiro, S. M.

    2013-06-01

    The response of Earth to natural climate cyclicity is written in marine sediments. The Earth is a complex system, as is climate change determined by various modes, frequency of cycles, forcings, boundary conditions, thresholds, and tipping elements. Oceans act as climate change buffers, and marine sediments provide archives of climate conditions in the Earths history. To read climate records they must be well-dated, well-calibrated and analysed at high-resolution. Reconstructions of past climates are based on climate variables such as atmospheric composition, temperature, salinity, ocean productivity and wind, the nature and quality which are of the utmost importance. Once the palaeoclimate and palaeoceanographic proxy-variables of past events are well documented, the best results of modelling and validation, and future predictions can be obtained from climate models. Neither the mechanisms for abrupt climate changes at orbital, millennial and multi-decadal time scales nor the origin, rhythms and stability of cyclicity are as yet fully understood. Possible sources of cyclicity are either natural in the form of internal ocean-atmosphere-land interactions or external radioactive forcing such as solar irradiance and volcanic activity, or else anthropogenic. Coupling with stochastic resonance is also very probable. I provide here, an overview of the cyclicity affecting the Earth on various time scales focussing upon the Plio-Pleistocene and Holocene epochs, together with a compilation of some of the key questions under debate, and a number of representative works that illustrate cyclicity in marine sediments. (Author)

  20. Influence of macrobenthos on chemical diagenesis of marine sediments

    Energy Technology Data Exchange (ETDEWEB)

    Aller, R.C.

    1977-05-01

    Diagenetic reactions involving the decomposition of organic matter and the dissolution, mobilization, and reprecipitation of metals sensitive to oxidation-reduction reactions, are most intense and rapid in the upper 1 m and especially the upper 10 cm of marine sediment. It is in this upper zone where most benthic organisms live and interact with sediments and where exchange rates of dissolved and particulate material between sediment and overlying water are largely determined. In Long Island Sound, U.S.A., both spatial and temporal trends in sediment chemistry and the flux of material out of the bottom demonstrate the control of diagenesis by bottom fauna. /sup 234/Th//sup 238/U disequilibrium studies demonstrate that particle reworking rates near the sediment-water interface vary both temporally and spatially in the Sound. The most rapid reworking occurs in protobranch-inhabited bottom areas as do the highest /sup 234/Th inventories. Excess /sup 234/Th profiles in the sediment allow determination of the rates of selected diagenetic reactions, such as Mn/sup + +/ production, near the sediment surface. Both the /sup 234/Th disequilibrium and flux measurements indicate that intra-estuarine redistribution of metals continually takes place.

  1. Quantifying the degradation of organic matter in marine sediments: A review and synthesis

    Science.gov (United States)

    Arndt, Sandra; Jørgensen, B. B.; LaRowe, D. E.; Middelburg, J. J.; Pancost, R. D.; Regnier, P.

    2013-08-01

    Quantifying the rates of biogeochemical processes in marine sediments is essential for understanding global element cycles and climate change. Because organic matter degradation is the engine behind benthic dynamics, deciphering the impact that various forces have on this process is central to determining the evolution of the Earth system. Therefore, recent developments in the quantitative modeling of organic matter degradation in marine sediments are critically reviewed. The first part of the review synthesizes the main chemical, biological and physical factors that control organic matter degradation in sediments while the second part provides a general review of the mathematical formulations used to model these processes and the third part evaluates their application over different spatial and temporal scales. Key transport mechanisms in sedimentary environments are summarized and the mathematical formulation of the organic matter degradation rate law is described in detail. The roles of enzyme kinetics, bioenergetics, temperature and biomass growth in particular are highlighted. Alternative model approaches that quantify the degradation rate constant are also critically compared. In the third part of the review, the capability of different model approaches to extrapolate organic matter degradation rates over a broad range of temporal and spatial scales is assessed. In addition, the structure, functions and parameterization of more than 250 published models of organic matter degradation in marine sediments are analyzed. The large range of published model parameters illustrates the complex nature of organic matter dynamics, and, thus, the limited transferability of these parameters from one site to another. Compiled model parameters do not reveal a statistically significant correlation with single environmental characteristics such as water depth, deposition rate or organic matter flux. The lack of a generic framework that allows for model parameters to be

  2. Discovery of enzymes for toluene synthesis from anoxic microbial communities

    DEFF Research Database (Denmark)

    Beller, Harry R.; Rodrigues, Andria V.; Zargar, Kamrun

    2018-01-01

    Microbial toluene biosynthesis was reported in anoxic lake sediments more than three decades ago, but the enzyme catalyzing this biochemically challenging reaction has never been identified. Here we report the toluene-producing enzyme PhdB, a glycyl radical enzyme of bacterial origin that catalyzes...... phenylacetate decarboxylation, and its cognate activating enzyme PhdA, a radical S-adenosylmethionine enzyme, discovered in two distinct anoxic microbial communities that produce toluene. The unconventional process of enzyme discovery from a complex microbial community (>300,000 genes), rather than from...... a microbial isolate, involved metagenomics- and metaproteomics-enabled biochemistry, as well as in vitro confirmation of activity with recombinant enzymes. This work expands the known catalytic range of glycyl radical enzymes (only seven reaction types had been characterized previously) and aromatic...

  3. Benthic fluxes of mercury during redox changes in pristine coastal marine sediments from the Gulf of Trieste (northern Adriatic Sea)

    Energy Technology Data Exchange (ETDEWEB)

    Koron, Neza [National Institute of Biology, Piran (Slovenia). Marine Biological Section; Faganeli, Jadran [National Institute of Biology, Piran (Slovenia). Marine Biological Section; Jozef Stefan Institute, Ljubljana (Slovenia). Dept. of Environmental Sciences

    2012-12-15

    Purpose: The Gulf of Trieste (northern Adriatic Sea) is an example of a coastal environment contaminated with mercury (Hg). Contamination is a consequence of nearly 500 years of activity at the Idrija Mine (western Slovenia), which is the second largest Hg mine in the world. Oxygen depletion can be common in the Gulf of Trieste due to late summer stratification of the water column and accumulation of labile organic matter. Since changing redox conditions can have an impact on Hg transformations, we studied the effect of oxygen depletion, in parallel with sulphide, iron (Fe), manganese (Mn), fluorescent dissolved organic matter (FDOM) and nitrogen (N) and phosphorus (P) availability, on total Hg and methylmercury (MeHg) fluxes from sediments. Materials and methods: Pore water concentrations and benthic fluxes of total dissolved Hg and MeHg were studied in situ and in microcosm laboratory experiments using flux chambers encompassing three different stages: oxic, anoxic and reoxidation. Results and discussion: Our experiments showed that in the oxic stage there were small effluxes of MeHg to the water column, which increased in the anoxic stage and dropped rapidly in a subsequent reoxic stage, showing influx. Our results support the hypothesis that MeHg desorption from reduced metal hydroxides under anoxic conditions, and co-precipitation with Fe-oxides and MeHg demethylation in the reoxidation stage, may play a major role in determining MeHg benthic fluxes. For Hg and MeHg, it appears that there is little relationship between their pore water distribution and flux and that of FDOM, i.e. humics. Conclusions: The results indicate that there was no significant difference in Hg and MeHg pore water levels and their benthic fluxes between the contaminated northern and central parts of the Gulf of Trieste and the pristine southern part. This suggests that shallow and stratified coastal marine environments, in general, represent areas with a risk of high benthic release of

  4. Investigation into spore coat properties for the rapid identification of endospores in marine sediments

    Science.gov (United States)

    Rattray, J. E.; Chakraborty, A.; Bernard, B. B.; Brooks, J.; Hubert, C. R.

    2017-12-01

    Understanding the sediment biogeography of dormant marine thermophilic bacterial endospores (thermospores) has the potential to assist locating and characterising working petroleum systems. The presence of thermospores in cold ocean environments suggests that distribution occurs via hydrocarbon seepage from thermally active reservoirs. Low abundance and endospore coat physiology mean nucleic acid based techniques have limited success for in situ detection of thermospores. Alternative rapid analytical methods are needed so we investigated using the Schaeffer-Fulton (malachite green and safranin) and DAPI (4',6-diamidino-2-phenylindole) staining techniques on thermospores from cultures and marine sediments. Sediment samples from 111 locations in the Eastern Gulf of Mexico (100 to 3300 m water depth; 6 to 600 km apart) were incubated at high temperature, followed by construction of 16S rRNA gene amplicon libraries (V3-V4 region; Illumina MiSeq) revealing enrichment of species-level thermospore OTUs. A sulfate reducing bacterium from site EGM080 was purified and classified based on its rRNA gene sequence as Desulfotomaculum geothermicum. Prior to thermospore staining the culture was kept in the death/ decline phase for 16 weeks to promote sporulation. Samples of D. geothermicum and the source marine sediment were fixed, stained then analysed using brightfield, phase contrast or fluorescence microscopy. Thermospores in pure culture were identified using phase contrast but were difficult to observe in the sediment sample due to particle aggregation. The Schaeffer-Fulton technique aided thermospore identification in a complex sediment sample matrix as thermospores were stained bright green, and also revealed that there were only spores and no (red stained) vegetative cells in the culture. Treatment with DAPI gave dull fluorescing cells but also provided insight into the behaviour of thermospores in sediment suspensions. Spores in the culture medium were free floating but

  5. Evaluating chemical extraction techniques for the determination of uranium oxidation state in reduced aquifer sediments

    Science.gov (United States)

    Stoliker, Deborah L.; Campbell, Kate M.; Fox, Patricia M.; Singer, David M.; Kaviani, Nazila; Carey, Minna; Peck, Nicole E.; Barger, John R.; Kent, Douglas B.; Davis, James A.

    2013-01-01

    Extraction techniques utilizing high pH and (bi)carbonate concentrations were evaluated for their efficacy in determining the oxidation state of uranium (U) in reduced sediments collected from Rifle, CO. Differences in dissolved concentrations between oxic and anoxic extractions have been proposed as a means to quantify the U(VI) and U(IV) content of sediments. An additional step was added to anoxic extractions using a strong anion exchange resin to separate dissolved U(IV) and U(VI). X-ray spectroscopy showed that U(IV) in the sediments was present as polymerized precipitates similar to uraninite and/or less ordered U(IV), referred to as non-uraninite U(IV) species associated with biomass (NUSAB). Extractions of sediment containing both uraninite and NUSAB displayed higher dissolved uranium concentrations under oxic than anoxic conditions while extractions of sediment dominated by NUSAB resulted in identical dissolved U concentrations. Dissolved U(IV) was rapidly oxidized under anoxic conditions in all experiments. Uraninite reacted minimally under anoxic conditions but thermodynamic calculations show that its propensity to oxidize is sensitive to solution chemistry and sediment mineralogy. A universal method for quantification of U(IV) and U(VI) in sediments has not yet been developed but the chemical extractions, when combined with solid-phase characterization, have a narrow range of applicability for sediments without U(VI).

  6. Assessment of Measurement Uncertainty Values of the Scandium Determination in Marine Sediment

    International Nuclear Information System (INIS)

    Rina-Mulyaningsih, Th.

    2005-01-01

    The result value of testing is meaningless if it isn't completed with uncertainty value. So that with the analysis result Sc in the marine sediment sample. It was assessed the uncertainty measurement of Sc analysis in marine sediment. The experiment was done in AAN Serpong laboratory. The result of calculation uncertainty on Sc analysis showed that the uncertainty components come from: preparation of sample and standard/comparator, purity of standard, counting statistics (sample and standard), repeatability, nuclear data and decay correction. The assessment on uncertainty must be done for the analysis of others elements, because each elements has difference nuclear and physical properties. (author)

  7. Petroleum hydrocarbon concentrations in marine sediments along Chennai Coast, Bay of Bengal, India.

    Science.gov (United States)

    Venkatachalapathy, R; Veerasingam, S; Ramkumar, T

    2010-10-01

    The spatial and temporal distribution of petroleum hydrocarbons (PHC) in marine sediments along the Chennai coast, Bay of Bengal was quantified by Ultra-Violet Fluorescence (UVF) Spectroscopy. The concentration of PHC in surface sediments varied from 1.88 to 39.76 ppm. The highest values obtained in the northern part of the study area, where shipping activities and land-based waste waters disposed into sea through the rivers like Kuvam and Adayar. The Adayar (7.26-16.83 ppm) and Kuvam (5.5-39.72 ppm) cores reveal a clear horizon of increase in PHC above 50 and 35 cm respectively. PHC values showed a decreasing pattern with depth in all sediment cores suggesting the excess anthropogenic loading occurring in the recent past. The present study revealed that the PHC values of Chennai coastal sediments are lower than the values reported from selected costal areas including the sediment of the Mumbai coast (7.6-42.8 ppm), Arabian Sea. The results will be useful for pollution monitoring program along the coastal region and also to check the level of petroleum hydrocarbons in marine sediments.

  8. Cretaceous sedimentation in the outer Eastern Carpathians: Implications for the facies model reconstruction of the Moldavide Basin

    Science.gov (United States)

    Roban, R. D.; Krézsek, C.; Melinte-Dobrinescu, M. C.

    2017-06-01

    The mid Cretaceous is characterized by high eustatic sea-levels with widespread oxic conditions that made possible the occurrence of globally correlated Oceanic Red Beds. However, very often, these eustatic signals have been overprinted by local tectonics, which in turn resulted in Lower Cretaceous closed and anoxic basins, as in the Eastern Carpathians. There, the black shale to red bed transition occurs in the latest Albian up to the early Cenomanian. Although earlier studies discussed the large-scale basin configuration, no detailed petrography and sedimentology study has been performed in the Eastern Carpathians. This paper describes the Hauterivian to Turonian lithofacies and interprets the depositional settings based on their sedimentological features. The studied sections crop out only in tectonic half windows of the Eastern Carpathians, part of the Vrancea Nappe. The lithofacies comprises black shales interbedded with siderites and sandstones, calcarenites, marls, radiolarites and red shales. The siliciclastic muddy lithofacies in general reflects accumulation by suspension settling of pelagites and hemipelagites in anoxic (black shale) to dysoxic (dark gray and gray to green shales) and oxic (red shales) conditions. The radiolarites alternate with siliceous shales and are considered as evidence of climate changes. The sandstones represent mostly low and high-density turbidite currents in deep-marine lobes, as well as channel/levee systems. The source area is an eastern one, e.g., the Eastern Carpathians Foreland, given the abundance of low grade metamorphic clasts. The Hauterivian - lower Albian sediments are interpreted as deep-marine, linear and multiple sourced mud dominated systems deposited in a mainly anoxic to dysoxic basin. The anoxic conditions existed in the early to late Albian, but sedimentation changed to a higher energy mud/sand-dominated submarine channels and levees. This coarsening upwards tendency is interpreted as the effect of the

  9. Trace Elements in Marine Sediment and Organisms in the Gulf of Thailand

    Science.gov (United States)

    Worakhunpiset, Suwalee

    2018-01-01

    This review summarizes the findings from studies of trace element levels in marine sediment and organisms in the Gulf of Thailand. Spatial and temporal variations in trace element concentrations were observed. Although trace element contamination levels were low, the increased urbanization and agricultural and industrial activities may adversely affect ecosystems and human health. The periodic monitoring of marine environments is recommended in order to minimize human health risks from the consumption of contaminated marine organisms. PMID:29677146

  10. Redox-dependent phosphorus burial in modern and ancient marine sediments. Geologica Ultraiectina (334)

    NARCIS (Netherlands)

    Kraal, P.

    2011-01-01

    Phosphorus (P) is an essential nutrient in Earth’s biosphere that helps regulate marine primary productivity. Burial in sediments is the only pathway for long-term removal of P from the marine reservoir, the efficiency of which depends strongly on the redox state of the bottom waters;

  11. Sediment-worm interaction: transfer of 65Zn from marine silt by the polychaete, Nereis diversicolor

    International Nuclear Information System (INIS)

    Renfro, W.C.; Benayoun, G.

    1976-01-01

    Marine polychaete worms (Nereis diversicolor) accumulated 65 Zn sorbed to silty marine sediment for 5 days and were then transferred to nonradioactive sediment in the laboratory and in the sea. The mean biological half-life (T/sub B//2/) for the laboratory worms did not differ greatly from that for worms in the sea. Worms living in small flowing seawater systems containing 16 cm 3 of sediment accumulated 65 Zn added to each system in the form of radioactive organic detritus. Higher percentage uptake of 65 Zn was from radioactive detritus particles 0.2 to 2 mm in diameter resting on the sediment surface or mixed with sediment than from finely-ground ( 65 Zn coprecipitated from fresh water with Fe(OH) 3 was accumulated by N. diversicolor when the precipitate was on the sediment surface than when the precipitate was well mixed with the sediment. These experimental results indicate that benthic organisms may take up limited amounts of heavy metals associated with bottom sediments and recycle them to benthic and pelagic food webs

  12. Marine ecosystem resilience during extreme deoxygenation: the Early Jurassic oceanic anoxic event.

    Science.gov (United States)

    Caswell, Bryony A; Frid, Christopher L J

    2017-01-01

    Global warming during the Early Jurassic, and associated widespread ocean deoxygenation, was comparable in scale with the changes projected for the next century. This study quantifies the impact of severe global environmental change on the biological traits of marine communities that define the ecological roles and functions they deliver. We document centennial-millennial variability in the biological trait composition of Early Jurassic (Toarcian) seafloor communities and examine how this changed during the event using biological traits analysis. Environmental changes preceding the global oceanic anoxic event (OAE) produced an ecological shift leading to stressed benthic palaeocommunities with reduced resilience to the subsequent OAE. Changes in traits and ecological succession coincided with major environmental changes; and were of similar nature and magnitude to those in severely deoxygenated benthic communities today despite the very different timescales. Changes in community composition were linked to local redox conditions whereas changes in populations of opportunists were driven by primary productivity. Throughout most of the OAE substitutions by tolerant taxa conserved the trait composition and hence functioning, but periods of severe deoxygenation caused benthic defaunation that would have resulted in functional collapse. Following the OAE recovery was slow probably because the global nature of the event restricted opportunities for recruitment from outside the basin. Our findings suggest that future systems undergoing deoxygenation may initially show functional resilience, but severe global deoxygenation will impact traits and ecosystem functioning and, by limiting the species pool, will slow recovery rates.

  13. The geochemistry and mobility of the lanthanides in marine sediments

    International Nuclear Information System (INIS)

    Elderfield, H.

    1988-07-01

    A study has been made to evaluate lanthanide mobility in sediments directly by measuring concentrations of 10 lanthanide elements in sediments and pore waters. Due to the very low concentrations of the lanthanides in sea water relative to marine sediments, evidence of lanthanide mobilization is usually difficult to detect from studies of solid-phase geochemistry. Results show that the lanthanides can be extremely mobile. Concentrations in pore waters up to 100 times sea water concentrations have been measured. The conclusions are tentative but the present data suggest that the lanthanides are mobilized during oxidation of organic-rich sediments and are relocated in part in association with secondary Fe-rich phases. The behaviour of Ce is, predictably, somewhat different from the other lanthanides and may be more mobile as a consequence of its redox chemistry. (author)

  14. A novel approach to the assess biotic oxygen consumption in marine sediment communities

    Science.gov (United States)

    Baranov, Victor; Queiros, Ana; Widdicombe, Stephen; Stephens, Nick; Lessin, Gennadi; Krause, Stefan; Lewandowski, Joerg

    2016-04-01

    Bioturbation , the mixing of the sediment matrix by burrowing animals impacts sediment metabolism, including respiration through redistribution of particulate organics, changes in bacterial biota diversity and acitivity, as well as via burrowing fauna's own metabolism. Bioturbation, reflecting faunal activity, is also a proxy for the general sedimentary ecosystem health, and can be impacted by many of emerging marine environmental issues such as ocean acidification, warming and the occurrence of heat waves. Sedimentary oxygen consumption is often taken as a proxy for the activity of bioturbating fauna, but determining baselines can be difficult because of the confounding effects of other fauna and microbes present in sediments, as well as irnorganic processes that consume oxygen. Limitations therefore exist in current methodologies, and numerous confounding factors are hampering progress in this area. Here, we present novel method for the assessment of sediment respiration which is expected to be affected only by the biogenic oxygen consumption (namely aerobic respiration). As long as tracer reduction "immune" to inorganic oxygen consumption, so that measurements using this method can be used, alongside traditional methods, to decouple biological respiration from inorganic oxygen consumption reactions. The tracer is easily detectable, non-toxic and can be applied in systems with constant oxygen supply. The latter allow for incubation without the need to to work with unsealed experimental units, bringing procedural advantage over traditional methods. Consequently assessed bioturbating fauna is not exposed to hypoxia and additional stress. Here, we had applied system for the first time to investigate impacts of a common North-Atlantic bioturbator, the brittle star Amphiura filiformis, - on respiration of marine sediments. Two series of experiments were conducted with animals and sediment collected from Cawsand Bay, Plymouth, UK Preliminary results show that tracer

  15. Comparison of influences of sediments and sea water on accumulation of radionuclides by marine organisms

    International Nuclear Information System (INIS)

    Ueda, Taiji; Nakamura, Ryoichi; Suzuki, Yuzuru

    1978-01-01

    The concentration factors of 106 Ru- 106 Rh and 137 Cs for a marine bivalve and a alga were investigated. Furthermore, the transfer ratio ([cpm/g of organism]/[cpm/g of sediment]) of these nuclides from contaminated sediments to organisms was examined. Then the concentration factors were compared with the transfer ratio to know the relative influence of sea water and sediments on the contamination of marine organisms. The obtained figures, we call the biological factor of the sediments (BFS), were 70 and 160 for red alga and bivalve on 137 Cs, and 5400 and 2900 for them in case of 106 Ru- 106 Rh, respectively. These figures were comparable to those for annelid worm, 40 on 137 Cs and 1000 on 106 Ru- 106 Rh. (auth.)

  16. Heavy metals in marine coastal sediments: assessing sources, fluxes, history and trends.

    Science.gov (United States)

    Frignani, Mauro; Bellucci, Luca Giorgio

    2004-01-01

    Examples are presented from the Adriatic Sea, the Ligurian Sea and the Venice Lagoon to illustrate different approaches to the study of anthropogenic metals in marine coastal sediments. These examples refer to studies of areal distribution and transport mechanisms, individuation of the sources, sediment dating, chronology of the fluxes, present and past trends. In particular, some of the findings achieved in studying the Venice Lagoon are discussed from the point of view of anthropogenic changes both in sediment composition and contaminant fluxes.

  17. 226Ra chronology of a coastal marine sediment

    International Nuclear Information System (INIS)

    Koide, M.; Bruland, K.; Goldberg, E.D.

    1976-01-01

    Unsupported 226 Ra (tsub (1/2) = 1620 years) in marine sediments can provide a basis for measuring rates of accumulation of the order of centimeters per thousand years. The excess radium apparently enters the sediments incorporated in phytoplankton. The sensitivity of the method depends upon the initial value of the unsupported 226 Ra and of the value of 230 Th, a parent of 226 Ra, in the sedimentary components. 226 Ra dating was applied to a sediment taken from the slope of the San Clemente Basin in the Southern California coastal region. Rates of sedimentation over two half-lives of the nuclide were found to be either 5.2 or 5.3 cm/1000 years depending upon which of two models for the geochronology is used. One model assumes that the 230 Th brings to the deposit an amount of 226 Ra in equilibrium with it. The other is based upon the growth of the 226 Ra from the 230 Th in the sedimentary components. 238+239 Pu and 210 Pb levels in the upper strata indicated sedimentation rates of the order of 100-500 cm/1000 years, i.e. much faster accumulations. It is suggested that these derived rates are spurious and reflect bioturbative activities of surface-living organisms. (Auth.)

  18. Bacterial corrosion in marine sediments: influence of cathodic protection

    International Nuclear Information System (INIS)

    Therene, Martine

    1988-01-01

    In order to protect offshore structures from marine corrosion, cathodic protection is widely applied via sacrificial anodes (for example zinc or aluminium) or impressed current. In aerated seawater, steel is considered to be protected when a potential of -8050 mV/Cu.CuSO 4 is achieved. In many cases, however this potential must be lowered, due to the activity of microorganisms and more specially sulfate-reducing bacteria (SRB). SRB are obligate anaerobes using sulphate as electron acceptor with resultant production of sulphide. Some of them are also able to use hydrogen as energy source, causing cathodic depolarization of steel surfaces. An experiment was performed to analyze the relation between SRB activity and use of different cathodic potentials applied to mild steel samples in marine sediments. Analytical techniques employed included lipid bio-markers and electrochemical methods. Results indicated an evolution of the bacterial community structure both on the steel and in the sediment, as a function of time and potential. The results also show that cathodically produced hydrogen promotes the growth of SRB (author) [fr

  19. Stabilization / solidification of polluted marine dredged sediment of port en Bessin France, using hydraulic binders and silica fume

    Science.gov (United States)

    Silitonga, Ernesto

    2017-09-01

    A large amount of sediment is dredged in France every year. Due to the increase of the amount of marine dredged sediments, environmentally reuse of dredged sediment is urgently needed in France. The first objective of this study is to find an application for reuse of marine dredged sediments materials, as new material for road construction. Hence, serial tests need to be realized to identify if marine dredged sediment could be utilized for road construction. The second goal is to enhance the physical, mechanical and chemical characteristics of the mix, by incorporating binders and sediments, and revealed the identification of the mechanical characteristics measured on the mixes is compatible with their use as a base course material. The results show that the treatment by hydraulics binders could satisfy the needed mechanical characteristics. The present of Silica Fume is aimed to reduce the pollution level, especially the heavy metal content. However, the proportion of hydraulics binders and silica fume needed to meet prescribed specification is important, so the reuse of the marine dredged sediments of Port-en-Bessin, France in road construction, as an alternative material could be achieved. After the geotechnical study in laboratory results shown as expected than the study to identify the chemical characteristic realized. To evaluate the environmental impacts of the used material, leaching test is performed. The leaching test was performed to verify the predicted release of pollutants based on total dissolution. And for the final part, the test results show that the polluted marine dredged sediments could be safely used (in term of environmental impact) as a new material in road construction.

  20. Sediment Burial Intolerance of Marine Macroinvertebrates.

    Directory of Open Access Journals (Sweden)

    Vicki J Hendrick

    Full Text Available The marine environment contains suspended particulate matter which originates from natural and anthropogenic sources. Settlement of this material can leave benthic organisms susceptible to smothering, especially if burial is sudden i.e. following storms or activities such as dredging. Their survival will depend on their tolerance to, and their ability to escape from burial. Here we present data from a multi-factorial experiment measuring burial responses incorporating duration, sediment fraction and depth. Six macroinvertebrates commonly found in sediment rich environments were selected for their commercial and/or conservation importance. Assessments revealed that the brittle star (Ophiura ophiura, the queen scallop (Aequipecten opercularis and the sea squirt (Ciona intestinalis were all highly intolerant to burial whilst the green urchin (Psammichinus miliaris and the anemone (Sagartiogeton laceratus, showed intermediate and low intolerance respectively, to burial. The least intolerant, with very high survival was the Ross worm (Sabellaria spinulosa. With the exception of C. intestinalis, increasing duration and depth of burial with finer sediment fractions resulted in increased mortality for all species assessed. For C. intestinalis depth of burial and sediment fraction were found to be inconsequential since there was complete mortality of all specimens buried for more than one day. When burial emergence was assessed O. ophiura emerged most frequently, followed by P. miliaris. The former emerged most frequently from the medium and fine sediments whereas P. miliaris emerged more frequently from coarse sediment. Both A. opercularis and S. laceratus showed similar emergence responses over time, with A. opercularis emerging more frequently under coarse sediments. The frequency of emergence of S. laceratus increased with progressively finer sediment and C. intestinalis did not emerge from burial irrespective of sediment fraction or depth. Finally

  1. Distribution of the dominant microbial communities in marine sediments containing high concentrations of gas hydrates

    Energy Technology Data Exchange (ETDEWEB)

    Briggs, B.; Colwell, F.; Carini, P.; Torres, M. [Oregon State Univ., Corvallis, OR (United States); Hangsterfer, A.; Kastner, M. [California Univ., San Diego, CA (United States). Scripps Inst. of Oceanography; Brodie, E. [Lawrence Berkeley National Laboratory, Berkeley, CA (United States). Center for Environmental Biotechnology; Daly, R. [California Univ., Berkeley, CA (United States); Holland, M. [GeoTek, Daventry, Northants (United Kingdom); Long, P.; Schaef, H. [Pacific Northwest National Laboratory, Richland, WA (United States). Environmental Technology; Delwiche, M. [Idaho National Laboratory, Idaho Falls, ID (United States). Biotechnology; Winters, W. [United States Geological Survey, Woods Hole, MA (United States). Woods Hole Science Center; Riedel, M. [McGill Univ., Montreal, PQ (Canada). Dept. of Earth and Planetary Sciences

    2008-07-01

    Methane produced by microorganisms represents a large portion of the methane that occurs in marine sediments where gas hydrates are present. The diverse communities that populate these formations have been documented by cultures or through molecular traces. Previous studies have explored the biogeography of hydrate-bearing systems by comparing clone libraries developed from sediments where hydrates are abundant with those developed from sediments that lack hydrates. There is a distinct microbial community present in sediments that have methane hydrates. This paper presented an investigation into finer-scale biogeography, in order to determine how factors such as the presence or absence of hydrates, grain size, and the depositional environment in marine sediments may control the number, type and distribution of microbial communities in sediments. The purpose of the study was to understand the controls on the distribution and activity of all microbes that contribute to the conversion of organic matter to methane. To this aim, DNA was extracted from deep marine sediments cored from continental slope locations including offshore India and the Cascadia Margin. The data from the study was used to refine computational models that require biological rate terms that are consistent with sediment conditions in order to accurately describe the dynamics of this large methane reservoir. The paper discussed the materials and methods used for the study, including the sample site, sample collection and microbiological analysis. Results were presented in terms of DNA extractions; microbial diversity; and biofilm analyses. It was concluded that the findings from the study complemented previously reported studies which indicated the presence of diverse microbial communities in sediments containing methane hydrates. 9 refs., 5 figs.

  2. Magnetic fingerprint in marine sediments: clues from cultivated Magnetovibrio blakemorei and recent cores from Brazilian Coast

    Science.gov (United States)

    Jovane, L.; Florindo, F.; Bazylinski, D. A.; Pellizari, V. H.; Brandini, F. P.; de Almeida, L. A.; Carneiro, F. R.; Braga, E. D.; Lins, U.

    2013-12-01

    The magnetic properties (first order reversal curves, ferromagnetic resonance and decomposition of saturation remanent magnetization acquisition) of Magnetovibrio blakemorei strain MV-1, a marine magnetotactic bacterium, differ from those of other magnetotactic species from sediments deposited in lakes and marine habitats previously studied. This finding suggests that magnetite produced by some magnetotactic bacteria retains magnetic properties in relation to the crystallographic structure of the magnetic phase produced and thus might represent a 'magnetic fingerprint' for a specific magnetotactic bacterium. The technique used to determine this fingerprint is a non-destructive, new technology that might allow for the identification and presence of specific species or types of magnetotactic bacteria in certain environments such as sediment. We also show some preliminary results on the biogeochemical factors that control magnetotactic bacterial populations, documenting the environment and the preservation of bacterial magnetite, which dominates the palaeomagnetic signal throughout recent sediments from Brazilian Coast. We searched for magnetotactic bacteria in order to understand the ecosystems and environmental change related to their presence in sediments. We focused on studying the environmental conditions that allow for the presence of magnetotactic bacteria and magnetosomes in sediments including determining magnetotactic bacterial populations in marine settings, measuring crucial nutrient availability in the water column and in sediments, and examining particulate delivery to the seafloor.

  3. Marine fungi isolated from Chilean fjord sediments can degrade oxytetracycline.

    Science.gov (United States)

    Ahumada-Rudolph, R; Novoa, V; Sáez, K; Martínez, M; Rudolph, A; Torres-Diaz, C; Becerra, J

    2016-08-01

    Salmon farming is the main economic activity in the fjords area of Southern Chile. This activity requires the use of antibiotics, such as oxytetracycline, for the control and prevention of diseases, which have a negative impact on the environment. We analyzed the abilities of endemic marine fungi to biodegrade oxytetracycline, an antibiotic used extensively in fish farming. We isolated marine fungi strains from sediment samples obtained from an area of fish farming activity. The five isolated strains showed an activity on oxytetracycline and were identified as Trichoderma harzianum, Trichoderma deliquescens, Penicillium crustosum, Rhodotorula mucilaginosa, and Talaromyces atroroseus by a scanning electron microscopy and characterized by molecular techniques. Results showed significant degradation in the concentration of oxytetracycline at the first 2 days of treatment for all strains analyzed. At 21 days of treatment, the concentration of oxytetracycline was decreased 92 % by T. harzianum, 85 % by T. deliquescens, 83 % by P. crustosum, 73 % by R. mucilaginosa, and 72 % by T. atroroseus, all of which were significantly higher than the controls. Given these results, we propose that fungal strains isolated from marine sediments may be useful tools for biodegradation of antibiotics, such as oxytetracycline, in the salmon industry.

  4. Effects of terrestrial and marine organic matters on deposition of dechlorane plus (DP) in marine sediments from the Southern Yellow Sea, China: Evidence from multiple biomarkers

    International Nuclear Information System (INIS)

    Wang, Guoguang; Peng, Jialin; Hao, Ting; Feng, Lijuan; Liu, Qiaoling; Li, Xianguo

    2017-01-01

    As an emerging halogenated organic contaminant, Dechlorane Plus (DP) was scarcely reported in marine environments, especially in China. In this work, 35 surface sediments and a sediment core were collected across the Southern Yellow Sea (SYS) to comprehensively explore the spatio-temporal distribution and possible migration pathway of DP. DP concentrations ranged from 14.3 to 245.5 pg/g dry weight in the surface sediments, displaying a seaward increasing trend with the high levels in the central mud zone. This spatial distribution pattern was ascribed to that fine particles with the elevated DP levels were preferentially transported to the central mud zone under hydrodynamic forcing and/or via long-range atmospheric transportation and deposition. DP concentrations in sediment core gradually increased from the mid-1950s to present, which corresponded well with the historical production and usage of DP, as well as the economic development in China. Significantly positive correlation between DP and total organic carbon (TOC) in both surface sediments and sediment core indicated TOC-dependent natural deposition of DP in the SYS. We used multiple biomarkers, for the first time, to explore the potential effects of terrestrial and marine organic matters (TOM and MOM) on DP deposition. The results showed that competition may occur between TOM and MOM for DP adsorption, and MOM was the predominant contributor in controlling DP deposition in the marine sediments from the SYS. - Highlights: • Effects of TOM and MOM on DP deposition were first explored by multi-biomarkers. • Hydrodynamic forcing and atmospheric deposition were responsible for DP in the SYS. • MOM was the predominant contributor in controlling DP deposition to sediments in the SYS. • Competition may occur between TOM and MOM for DP adsorption. - This study was the first attempt to comprehensively explore the effects of TOM and MOM on DP deposition in marine sediments from the SYS.

  5. USE OF ULVA LACTUCA TO DISTINGUISH PH DEPENDENT TOXICANTS IN MARINE WATERS AND SEDIMENTS

    Science.gov (United States)

    Ulva lactuca (sea lettuce) is a cosmopolitan marine attached green seaweed capable of sequestering high environmental levels of ammonia. Ammonia can be acutely toxic to marine organisms and is often found in dredged sediments from highly industrial areas or from areas with high c...

  6. Elucidating Microbial Species-Specific Effects on Organic Matter Transformation in Marine Sediments

    Science.gov (United States)

    Mahmoudi, N.; Enke, T. N.; Beaupre, S. R.; Teske, A.; Cordero, O. X.; Pearson, A.

    2017-12-01

    Microbial transformation and decomposition of organic matter in sediments constitutes one of the largest fluxes of carbon in marine environments. Mineralization of sedimentary organic matter by microorganisms results in selective degradation such that bioavailable or accessible compounds are rapidly metabolized while more recalcitrant, complex compounds are preserved and buried in sediment. Recent studies have found that the ability to use different carbon sources appears to vary among microorganisms, suggesting that the availability of certain pools of carbon can be specific to the taxa that utilize the pool. This implies that organic matter mineralization in marine environments may depend on the metabolic potential of the microbial populations that are present and active. The goal of our study was to investigate the extent to which organic matter availability and transformation may be species-specific using sediment from Guaymas Basin (Gulf of California). We carried out time-series incubations using bacterial isolates and sterilized sediment in the IsoCaRB system which allowed us to measure the production rates and natural isotopic signatures (δ13C and Δ14C) of microbially-respired CO2. Separate incubations using two different marine bacterial isolates (Vibrio sp. and Pseudoalteromonas sp.) and sterilized Guaymas Basin sediment under oxic conditions showed that the rate and total quantity of organic matter metabolized by these two species differs. Approximately twice as much CO2 was collected during the Vibrio sp. incubation compared to the Pseudoalteromonas sp. incubation. Moreover, the rate at which organic matter was metabolized by the Vibrio sp. was much higher than the Pseudoalteromonas sp. indicating the intrinsic availability of organic matter in sediments may depend on the species that is present and active. Isotopic analyses of microbially respired CO2 will be used to constrain the type and age of organic matter that is accessible to each species

  7. Thermally induced motion of marine sediments resulting from disposal of radioactive wastes

    International Nuclear Information System (INIS)

    Chavez, P.F.; Dawson, P.R.

    1981-01-01

    Coupled creep and heat transfer calculations have been performed to assess the sensitivity of heat load, viscosity, and canister density on the motion of waste canisters buried in marine sediments. Results indicate that no upward movement is predicted for heat loads remaining within the metallurgical and geochemical constraints placed on the temperature of sediments near the canister for the times analyzed. Upward movement of the canister is again not observed in calculations involving reasonable variations of the sediment viscosity and canister density. Maximum effective deviatoric stress levels due to thermally induced differential body forces are significantly less than the sediment's short term peak strength

  8. Tracking Early Jurassic marine (de)oxygenation

    Science.gov (United States)

    Them, T. R., II; Caruthers, A. H.; Gill, B. C.; Gröcke, D. R.; Marroquín, S. M.; Owens, J. D.

    2017-12-01

    It has been suggested that the carbon cycle was perturbed during the Toarcian OAE (T-OAE) as observed in the carbon isotope record, and more recently other elemental cycles (e.g., Hg, Mo, Os, S). The most widely accepted hypothesis focuses on the emplacement of the Karoo-Ferrar large igneous province, outgassing of greenhouse gases, and subsequent feedbacks in the Earth system, which caused severe environmental change and biological turnover. Feedbacks to elevated atmospheric pCO2 include enhanced weathering rates, dissociation of methane clathrates, increased terrestrial methanogenesis, and widespread marine anoxia. The sequence of events related to the development and duration of marine anoxia are not well constrained for this time interval due to a lack of open-ocean geochemical records. In order to reconstruct the timing of marine deoxygenation during the Early Jurassic T-OAE, we have utilized thallium isotopes, a novel geochemical proxy from multiple anoxic basins in North America and Germany. Three sites representing a basin transect from the Western Canada Sedimentary Basin, and one site from the South German Basin, were chosen to reconstruct the thallium isotopic composition (ɛ205Tl) of the ocean. The ɛ205Tl composition of sediments deposited under anoxic and euxinic water columns records the global seawater ɛ205Tl composition, a function of the amount of manganese oxides that are precipitated. Increased geographic extent of marine anoxia will cause a decrease in manganese oxide precipitation and perturb the thallium system. Importantly, the inputs of thallium are nearly identical, thus changes in these fluxes cannot drive the observed perturbation. Our new Early Jurassic ɛ205Tl records suggest that the onset of marine deoxygenation occurred concurrently with Karoo-Ferrar magmatism in the late Pliensbachian and continued until after the T-OAE. These new data support a Karoo-Ferrar trigger of the T-OAE. However, thallium isotopes also suggest that

  9. Optically stimulated luminescence (OSL) dating of shallow marine sediments to develop an analysis method of late Quaternary geodynamics

    International Nuclear Information System (INIS)

    Hataya, Ryuta; Shirai, Masaaki

    2003-01-01

    To develop an analysis method of geodynamics, we have examined the applicability of the OSL dating of marine terrace deposits. We have done the OSL dating, using the multiple-aliquot additive-dose technique, of shallow marine sediments from the upper part the Kioroshi Formation in Ibaraki Prefecture, which are correlated to Marine Oxygen Isotope Stage (MIS) 5e-5c. Marine terrace deposit consists mainly of shallow marine sediment. OSL ages of foreshore and foreshore-shoreface beds are 88-112 Ka, and are in good agreement with the geological/geomorphological data. On the other hand, OSL ages of the backshore bed are younger, and ones of the shoreface bed are older than geologically estimated ages. These results show that OPSL dating method can date shallow marine sediment using samples from foreshore and foreshore-shoreface beds, and that this method can distinguish terrace deposits formed in MIS5 and that in MIS7 by taking geomorphologic information into account. These results contribute to the characterization of long-term geological movement in coastal areas. (author)

  10. Magnetotactic bacteria in marine sediments: clues from recent cores from Brazilian Coast

    Science.gov (United States)

    Jovane, L.; Pellizari, V. H.; Brandini, F. P.; Braga, E. D. S.; Freitas, G. R.; Benites, M.; Rodelli, D.; Giorgioni, M.; Iacoviello, F.; Ruffato, D. G.; Lins, U.

    2014-12-01

    The magnetic properties (first order reversal curves, ferromagnetic resonance and decomposition of saturation remanent magnetization acquisition) of marine magnetotactic bacteria, in conjunction with geophysical, geochemical and oceanographic data from the Brazilian Coast, provide interesting insights regarding the primary productivity distribution in oceans. This finding suggests that magnetite produced by some magnetotactic bacteria retains magnetic properties in relation to the crystallographic structure of the magnetic phase produced and thus might represent a "magnetic fingerprint" for the presence of magnetotactic bacteria. The use of those magnetic properties is a non-destructive, new technology that might allow for the identification and presence of specific species or types of magnetotactic bacteria in certain environments such as sediment. We will also show some preliminary results on the biogeochemical factors that control magnetotactic bacterial populations, documenting the environment and the preservation of bacterial magnetite, which dominates the palaeomagnetic signal throughout recent sediments from Brazilian Coast. We searched for magnetotactic bacteria in order to understand the ecosystems and environmental change related to their presence in sediments. We studied magnetotactic bacterial concentration and geophysical, geochemical and oceanographic results in marine settings measuring crucially nutrients availability in the water column and in sediments, on particulate delivery to the seafloor, to understand the environmental condition that allow the presence of magnetotactic bacteria and magnetosomes in sediments.

  11. [Dynamics of 95Zr in simulated marine water-sediment-organisms system].

    Science.gov (United States)

    Wang, Chunlin; Shi, Jianjun; Sun, Pingyue; Li, Mingyun

    2003-06-01

    To provide scientific evidence to evaluate the behavior of 95Zr in ocean ecosystem, the dynamic model of the transference, accumulation and disappearance of 95Zr among the simulated marine water, sediment and organisms was investigated using Nassarius semiplicatus and Boleophthalums pectinirostris as experimental stuffs. The result showed that 95Zr(Bq.g-1 or Bq.ml-1) in the marine water was decreased more than 90% in the first 4 h, and then descended gradually. 95Zr in sediment was increased in the peak in 48 h and then declined. The radioactivity percent of 95Zr in the shell and muslce of Nassarius semiplicatus was 68.7% and 31.30% respectively, while the radioactivity percent was 22.80%, 12.64%, 34.82%, 10.31%, 4.48%, 11.55% and 3.71%, respectively in the fill, fin, viscera, skull, skin, vertebra and muscle of Boleophthalmus pectinirostris. Nassarius semiplicatus had a greater concentrating capability of 95Zr than Boleophthalmus pectinirostris. The order of the 95Zr concentration was found to be sediment > Nassarius semiplicatus > water > Boleophthalmus pectinirostris. A dynamic model of closed four-compartment was constructed with exponent function.

  12. Increased thermohaline stratification as a possible cause for an ocean anoxic event in the Cretaceous period.

    Science.gov (United States)

    Erbacher, J; Huber, B T; Norris, R D; Markey, M

    2001-01-18

    Ocean anoxic events were periods of high carbon burial that led to drawdown of atmospheric carbon dioxide, lowering of bottom-water oxygen concentrations and, in many cases, significant biological extinction. Most ocean anoxic events are thought to be caused by high productivity and export of carbon from surface waters which is then preserved in organic-rich sediments, known as black shales. But the factors that triggered some of these events remain uncertain. Here we present stable isotope data from a mid-Cretaceous ocean anoxic event that occurred 112 Myr ago, and that point to increased thermohaline stratification as the probable cause. Ocean anoxic event 1b is associated with an increase in surface-water temperatures and runoff that led to decreased bottom-water formation and elevated carbon burial in the restricted basins of the western Tethys and North Atlantic. This event is in many ways similar to that which led to the more recent Plio-Pleistocene Mediterranean sapropels, but the greater geographical extent and longer duration (approximately 46 kyr) of ocean anoxic event 1b suggest that processes leading to such ocean anoxic events in the North Atlantic and western Tethys were able to act over a much larger region, and sequester far more carbon, than any of the Quaternary sapropels.

  13. Comparison of test specific sediment effect concentrations with marine sediment quality assessment guidelines

    International Nuclear Information System (INIS)

    Carr, R.S.; Biedenbach, J.M.; MacDonald, D.D.

    1995-01-01

    As part of NOAA's National Status and Trends (NS and T) Bioeffects Assessment program and studies conducted by the National Biological Service, numerous sediment quality assessment surveys have recently been conducted along the Atlantic and Gulf coasts of the US using the sea urchin (Arbacia punctulata) fertilization and embryological development tests with pore water. Additional toxicity tests were also conducted in conjunction with most of these studies. The areas that have been sampled include Boston harbor, Massachusetts; Charleston Harbor, Winyah Bay, and Savannah River, South Carolina; St. Simon Sound, Georgia; Biscayne Bay, Tampa Bay, Choctawhatchee Bay, Apalachicola Bay, St. Andrew Bay, and Pensacola Bay, Florida; Galveston Bay, Lavaca Bay, and Sabine Lake, Texas, and 200 stations in the vicinity of offshore oil and gas production platforms in the Gulf of Mexico. Sufficient data are now available from this series of surveys to calculate test specific sediment effect concentrations (SECs). Based on these recent studies, SECs were developed for the sea urchin porewater and amphipod tests and compared with existing marine sediment quality assessment guidelines

  14. 137Cs in marine sediments of Admiralty Bay, King George Island, Antarctica

    International Nuclear Information System (INIS)

    Ferreira, Paulo Alves de Lima; Ribeiro, Andreza Portella; Nascimento, Mylene Giseli do; Martins, Cesar de Castro; Mahiques, Michel Michaelovitch de; Montone, Rosalinda Carmelo; Figueira, Rubens Cesar Lopes

    2013-01-01

    The radionuclide cesium-137 ( 137 Cs) is produced exclusively by anthropogenic processes and primarily by nuclear explosions. This study determined the reference inventory that is 137 Cs associated with the element's original input, and utilized the levels of activity of this radionuclide previously measured in five sediment profiles collected from Admiralty Bay, Antarctica, to investigate the mobility of this element in the environment. 137 Cs has a half-life of 30 years. Because of this, it is environmentally persistent and has been shown to accumulate in marine organisms. The mean reference inventory of this radionuclide in Admiralty Bay sediments, determined using high resolution gamma ray spectrometry, was 20.23 ± 8.94 Bq m −2 , and within the ambient 137 Cs activity range. A model of 137 Cs diffusion–convection was applied to data collected from 1 cm intervals in sediment cores with the aim of providing insights with respect to this element's behavior in sediments. Model results showed a significant correlation between measured and modeled values using the concentrations of 137 Cs, and estimated input into the system from the global fallout of past nuclear tests and expected values based on local sedimentation rates. Results highlight the importance of accounting for the vertical diffusion of 137 Cs in marine sediments when used as a tracer for environmental processes and for assessing potential bioavailability. - Highlights: ► Cesium-137 ( 137 Cs) is produced exclusively by anthropogenic processes. ► A model of diffusion–convection simulated 137 Cs environmental behavior. ► This is important for assessing the bioavailability of this toxic element. ► In Antarctica ice cover influenced the input to the sediments

  15. Development of a chronic sediment toxicity test for marine benthic amphipods

    International Nuclear Information System (INIS)

    DeWitt, T.H.; Redmond, M.S.; Sewall, J.E.; Swartz, R.C.

    1992-12-01

    The results of the research effort culminated in the development of a research method for assessing the chronic toxicity of contaminated marine and estuarine sediments using the benthic amphipod, Leptocheirus plumulosus. The first chapter describes the efforts at collecting, handling, and culturing four estuarine amphipods from Chesapeake Bay, including L. plumulosus. This chapter includes maps of the distribution and abundance of these amphipods within Chesapeake Bay and methodologies for establishing cultures of amphipods which could be readily adopted by other laboratories. The second chapter reports the development of acute and chronic sediment toxicity test methods for L. plumulosus, its sensitivity to non-contaminant environmental variables, cadmium, two polynuclear aromatic hydrocarbons, and contaminated sediment from Baltimore Harbor, MD. The third chapter reports the authors attempts to develop a chronic sediment toxicity test with Ampelisca abdita

  16. DNA damage in the gill cells of the marine scallop Mizuhopecten yessoensis during anoxic stress and aerobic recovery

    Science.gov (United States)

    Slobodskova, Valentina V.; Zhukovskaya, Avianna F.; Chelomin, Victor P.

    2012-06-01

    Anoxia-induced DNA damage in the gill cells of the marine scallop Mizuhopecten yessoensis was assessed with the alkaline comet assay (single-cell gel electrophoresis). The alkaline comet assay method for detecting DNA strand breaks and alkali labile sites in individual cells. DNA damage was determened in the scallops ( M. yessoensis) gill cells. The scallops were exposed to air for 8 h showing a clear increase in the levels of DNA damage. After the air exposure, M. yessoensis were re-submersed for a period of 12 h, leading values to return to a pre-aerial exposure level. Control animals were kept immersed during the whole period. The resulting data demonstrate that natural influences, such as oxygen depletion (anoxia) in seawater, can be responsible for the induction of DNA damage. If the scallops were re-immersed in oxic conditions, the anoxically induced breaks were repaired. The main mechanisms influencing the integrity of the DNA structure are discussed in this paper.

  17. Validation of an analytical methodology for the quantitative analysis of petroleum hydrocarbons in marine sediment samples

    Directory of Open Access Journals (Sweden)

    Eloy Yordad Companioni Damas

    2009-01-01

    Full Text Available This work describes a validation of an analytical procedure for the analysis of petroleum hydrocarbons in marine sediment samples. The proposed protocol is able to measure n-alkanes and polycyclic aromatic hydrocarbons (PAH in samples at concentrations as low as 30 ng/g, with a precision better than 15% for most of analytes. The extraction efficiency of fortified sediments varied from 65.1 to 105.6% and 59.7 to 97.8%, for n-alkanes and PAH in the ranges: C16 - C32 and fluoranthene - benzo(apyrene, respectively. The analytical protocol was applied to determine petroleum hydrocarbons in sediments collected from a marine coastal zone.

  18. Analytical methods for measuring 10Be in marine sediments

    International Nuclear Information System (INIS)

    Graham, I.J.; Ditchburn, R.G.; Sparks, R.J.; Whitehead, N.E.

    1995-01-01

    A suite of marine sediments from the Wanganui Basin (Graham et al. 1995) has provided excellent material to further develop methods for 10 Be analysis at the Institute of Geological and Nuclear Sciences AMS facility. Chemical methods for Be extraction have been streamlined and there has been some reduction of backgrounds and contamination peaks for 1 0Be isotopic analysis. (authors) 12 refs., 5 figs., 1 tab

  19. Effect of a Jurassic oceanic anoxic event on belemnite ecology and evolution

    DEFF Research Database (Denmark)

    Ullmann, Clemens Vinzenz; Thibault, Nicolas Rudolph; Ruhl, Micha

    2014-01-01

    The Toarcian oceanic anoxic event (T-OAE; ∼183 million y ago) is possibly the most extreme episode of widespread ocean oxygen deficiency in the Phanerozoic, coinciding with rapid atmospheric pCO2 increase and significant loss of biodiversity in marine faunas. The event is a unique past tipping...... point in the Earth system, where rapid and massive release of isotopically light carbon led to a major perturbation in the global carbon cycle as recorded in organic and inorganic C isotope records. Modern marine ecosystems are projected to experience major loss in biodiversity in response to enhanced...

  20. Time Matters: Increasing the Efficiency of Antarctic Marine Geology and Paleoceanography Expeditions by Providing Improved Sediment Chronology

    Science.gov (United States)

    Rosenheim, B. E.; Domack, E. W.; Shevenell, A.; Subt, C.

    2015-12-01

    To maximize the areal extent of Antarctic sedimentary records of past deglaciation, it is necessary to ensure more sediment cores can be adequately dated. Antarctic margin sediment is challenging to date due to the lack of preserved calcium carbonate, but the records contained in these sediments readily recount the history of deglaciation. Recent and continued development of new chronological methods for Antarctic margin sediments have allowed better use of the efforts of marine geological coring expeditions to the region. The development of Ramped PyrOx radiocarbon dating has allowed us to 1. improve dates in deglacial sediments where no carbonate is preserved, 2. date glacial sediments lying below the tills marking the last glaciation, and 3. compile core chronologies into a regional framework of ice shelf collapse that has eluded many marine geology campaigns over the last few decades. These advances in a fundamental aspect of geological sciences will put the U.S. and international community on a better foothold to interpret the past as it relates to our warming future. We will present these advances in chronology as well as the science that is enabled by them, while arguing that the future of Antarctic marine science also depends on investments in shore-based technologies that come at a relatively low cost.

  1. Spatial and seasonal variations of Acid Volatile Sulfide (AVS) and Simultaneously Extracted Metals (SEM) in Dutch marine and freshwater sediments

    NARCIS (Netherlands)

    Hoop MAGT van den; Hollander HA den; Kerdijk HN; LAC; ECO; Delft Hydraulics

    1995-01-01

    Within the framework of the project Exposure Assessment, Acid Volatile Sulfide (AVS) and Simultaneously Extracted Metal (SEM) contents of Dutch marine and freshwater sediments were determined. For the present set of fifteen marine and six freshwater sediments AVS levels vary between non-detectable

  2. REMOVAL OF AMMONIA TOXCITY IN MARINE SEDIMENT TIES: A COMPARISON OF ULVA LACTUCA, ZEOLITE AND AREATION METHODS

    Science.gov (United States)

    Ammonia is suspected of causing some of the toxicity observed in marine sediment toxicity tests because it is sometimes found at elevated concentrations in marine interstitial waters. In marine waters, ammonia exists as un-ionized ammonia (NH3) and ammonium (NH4+) which combine ...

  3. Effects of Feeding Strategy, Sediment Characteristics, and Chemical Properties on Polychlorinated Biphenyl and Polybrominated Diphenyl Ether Bioaccumulation from Marine Sediments in Two Invertebrates.

    Science.gov (United States)

    Frouin, H; Jackman, P; Dangerfield, N D; Ross, P S

    2017-08-01

    Shellfish and sediment invertebrates have been widely used to assess pollution trends over space and time in coastal environments around the world. However, few studies have compared the bioaccumulation potential of different test species over a range of sediment-contaminant concentrations and profiles. The bioavailability of sediment-related contaminants was evaluated using sediments collected from sites (n = 12) throughout the Salish Sea, British Columbia, Canada. Two benthic marine invertebrates-the Baltic clam Macoma balthica and the polychaete worm Neanthes arenaceodentata-were exposed for 28 days in a controlled environment to these field-collected coastal sediments. The congener-specific uptake of legacy polychlorinated biphenyls (PCBs) and emergent polybrominated diphenyl ethers (PBDEs) was determined using high-resolution gas chromatography/mass spectrometry in sediments and in invertebrates after the experimental exposure. The polychaete Neanthes accumulated lower concentrations of PCBs but higher concentrations of PBDEs. The present study indicates that differences in bioaccumulation between these two invertebrates shape the accumulation of PCB and PBDE congeners, reflect differences in feeding strategies, and reveal the physicochemical properties of the contaminants and sediment properties. Because biota-sediment accumulation factor values are often calculated for environmental monitoring or site-specific impact assessments, our results provide insight into potentially confounding factors and the need for caution when selecting indicator species for coastal marine pollution.

  4. Radioactivity of some alpha, beta and gamma emitting radionuclides in surface marine sediments of different bays in Algeria

    International Nuclear Information System (INIS)

    Noureddine, A.; Baggoura, B.

    1999-01-01

    Samples of surface (0-15) cm marine sediments of different grain sizes, namely sand, muddy and fine sand, were collected in the western, central and east coast of Algeria, to measure concentrations of natural and artificial radioactivity. The aim of this study is to detect any radioactive contamination, its origin and also to determine the uptake of radioactivity by marine surface sediments

  5. Bioprospecting of Novel and Bioactive Compounds from Marine Actinomycetes Isolated from South China Sea Sediments.

    Science.gov (United States)

    Yang, Na; Song, Fuhang

    2018-02-01

    Marine actinomycetes are less investigated compared to terrestrial strains as potential sources of natural products. To date, few investigations have been performed on culturable actinomycetes associated with South China Sea sediments. In the present study, twenty-eight actinomycetes were recovered from South China Sea sediments after dereplication by traditional culture-dependent method. The 16S rRNA gene sequences analyses revealed that these strains related to five families and seven genera. Twelve representative strains possessed at least one of the biosynthetic genes coding for polyketide synthase I, II, and nonribosomal peptide synthetase. Four strains had anti-Mycobacterium phlei activities and five strains had activities against methicillin-resistant Staphylococcus aureus. 10 L-scale fermentation of strains Salinispora sp. NHF45, Nocardiopsis sp. NHF48, and Streptomyces sp. NHF86 were carried out for novel and bioactive compounds discovery. Finally, we obtained a novel α-pyrone compound from marine Nocardiopsis sp. NHF48, an analogue of paulomenol from marine Streptomyces sp. NHF86 and a new source of rifamycin B, produced by Salinispora sp. NHF45. The present study concluded that marine actinomycetes, which we isolated from South China Sea sediments, will be a suitable source for the development of novel and bioactive compounds.

  6. Reconstruction of late Quaternary marine and terrestrial environmental conditions of Northwest Africa and Southeast Australia : a multiple organic proxy study using marine sediments

    NARCIS (Netherlands)

    Alfama Lopes dos Santos, R.

    2012-01-01

    NW Africa and SE Australia are regions which are particularly vulnerable to climate change. In this thesis, organic proxies are used from marine sediment cores to reconstruct past environmental conditions from these areas. In sediments from NW Africa, the UK'37 showed an efficient proxy for sea

  7. Phosphorus fractions and sorption dynamics in the sediments of two Ca-SO4 water reservoirs in the central Argentine Andes

    Institute of Scientific and Technical Information of China (English)

    José Gabriel León; Fernando Luis Pedrozo; Pedro Félix Temporetti

    2017-01-01

    Phosphorus (P) fractionation and sorption behavior were studied in the sediments of two calcium-sulfate (Ca-SO4:Ca2+170 mg L-1;SO42-400 mg L-1) water reservoirs in the southern central Argentine Andes-El Carrizal Reservoir (ECR),which stratifies in summer and El Nihuil Reservoir (ENR),which is vertically mixed throughout the year. Sediment size classes reflected the lithology of both basins and the reservoirs relative location:ECR (downstream from a valley adjacent to a mountain environment) had higher clay proportions while the sand fraction was more important in ENR (just next to a mountain environment). In both reservoirs, the chemical composition revealed low alteration and calcium enrichment. Total P content was relatively high (1.1–1.6 mg P kg-1 dry weight) as expected from the contribution of marine formations. P fractionation was dominated by Ca-P (ECR, 69%and ENR, 63%) followed by organic-P (23%) in summer-anoxic ECR and by iron/aluminum (Fe/Al)-P (27%) in oxic ENR. Batch experiments showed that sorption behavior in ECR had a typical Langmuir isotherm plot while in ENR that model fitted only at low dissolved P values (<5 mg P L-1) and co-precipitation evidence was observed at higher P con-centrations. It is proposed that lower Fe/Al-P content in anoxic (ECR) vs. oxic (ENR) sediments results from the P released from iron-bound phosphorus due to sulfate reduction-ferrous sulfide formation in an anoxic environment. This condition should enable ECR sediments to adsorb P into fresh oxidized iron, and ENR sediments to co-precipitate P with calcium due to Fe/Al-P saturation, as observed in batch experiments. This paper constitutes the first description of phosphorus content and dynamics in reser-voir sediments in arid central western Argentina, where water sulfate concentrations are naturally high due to basin lithology.

  8. Evaluation of the presence of major anionic surfactants in marine sediments.

    Science.gov (United States)

    Cantarero, S; Camino-Sánchez, F J; Zafra-Gómez, A; Ballesteros, O; Navalón, A; Vílchez, J L; Verge, C; Reis, M S; Saraiva, P M

    2012-03-01

    The contamination of aquatic environments has become the focus of increasing regulation and public concern due to their potential and unknown negative effects on the ecosystems. The present work develops a monitoring and statistical study, based on the analysis of variance test (ANOVA) and the multivariable analysis, both for insoluble soap and LAS in order to compare the behavior of different anionic surfactants in this environmental compartment. First, a novel and successfully validated methodology to analyze insoluble soap in these samples is developed. The matrix effect and the comparison of different extraction techniques were also performed. The optimized analytical methodologies were applied to 48 representative samples collected from the Almeria Coast (Spain) and then a statistical analysis to correlate anionic surfactant concentration and several variables associated with marine sediment samples was also developed. The results obtained showed relevant conclusions related to the environmental behavior of anionic surfactants in marine sediments. Copyright © 2011 Elsevier Ltd. All rights reserved.

  9. Geochemical and geological constraints on the composition of marine sediment pore fluid: Possible link to gas hydrate deposits

    Digital Repository Service at National Institute of Oceanography (India)

    Mazumdar, A.; Joao, H.M.; Peketi, A.; Dewangan, P.; Kocherla, M.; Joshi, R.K.; Ramprasad, T.

    Pore water sulfate consumption in marine sediments is controlled by microbially driven sulfate reduction via organo-clastic and methane oxidation processes. In this work, we present sediment pore fluid compositions of 10 long sediment cores and high...

  10. Foraminiferal constituent in marine sediments - A parameter in some coastal engineering problems

    Digital Repository Service at National Institute of Oceanography (India)

    Setty, M.G.A.P.

    Foraminifera, among other microorganisms, form a major constituent of marine sediments and their composition is directly related to the nature of the substrate in which they are entombed. Past and the present data indicate that the size, test...

  11. Relevance of carbon stocks of marine sediments for national greenhouse gas inventories of maritime nations.

    Science.gov (United States)

    Avelar, Silvania; van der Voort, Tessa S; Eglinton, Timothy I

    2017-12-01

    Determining national carbon stocks is essential in the framework of ongoing climate change mitigation actions. Presently, assessment of carbon stocks in the context of greenhouse gas (GHG)-reporting on a nation-by-nation basis focuses on the terrestrial realm, i.e., carbon held in living plant biomass and soils, and on potential changes in these stocks in response to anthropogenic activities. However, while the ocean and underlying sediments store substantial quantities of carbon, this pool is presently not considered in the context of national inventories. The ongoing disturbances to both terrestrial and marine ecosystems as a consequence of food production, pollution, climate change and other factors, as well as alteration of linkages and C-exchange between continental and oceanic realms, highlight the need for a better understanding of the quantity and vulnerability of carbon stocks in both systems. We present a preliminary comparison of the stocks of organic carbon held in continental margin sediments within the Exclusive Economic Zone of maritime nations with those in their soils. Our study focuses on Namibia, where there is a wealth of marine sediment data, and draws comparisons with sediment data from two other countries with different characteristics, which are Pakistan and the United Kingdom. Results indicate that marine sediment carbon stocks in maritime nations can be similar in magnitude to those of soils. Therefore, if human activities in these areas are managed, carbon stocks in the oceanic realm-particularly over continental margins-could be considered as part of national GHG inventories. This study shows that marine sediment organic carbon stocks can be equal in size or exceed terrestrial carbon stocks of maritime nations. This provides motivation both for improved assessment of sedimentary carbon inventories and for reevaluation of the way that carbon stocks are assessed and valued. The latter carries potential implications for the management of

  12. Relevance of carbon stocks of marine sediments for national greenhouse gas inventories of maritime nations

    Directory of Open Access Journals (Sweden)

    Silvania Avelar

    2017-05-01

    Full Text Available Abstract Background Determining national carbon stocks is essential in the framework of ongoing climate change mitigation actions. Presently, assessment of carbon stocks in the context of greenhouse gas (GHG-reporting on a nation-by-nation basis focuses on the terrestrial realm, i.e., carbon held in living plant biomass and soils, and on potential changes in these stocks in response to anthropogenic activities. However, while the ocean and underlying sediments store substantial quantities of carbon, this pool is presently not considered in the context of national inventories. The ongoing disturbances to both terrestrial and marine ecosystems as a consequence of food production, pollution, climate change and other factors, as well as alteration of linkages and C-exchange between continental and oceanic realms, highlight the need for a better understanding of the quantity and vulnerability of carbon stocks in both systems. We present a preliminary comparison of the stocks of organic carbon held in continental margin sediments within the Exclusive Economic Zone of maritime nations with those in their soils. Our study focuses on Namibia, where there is a wealth of marine sediment data, and draws comparisons with sediment data from two other countries with different characteristics, which are Pakistan and the United Kingdom. Results Results indicate that marine sediment carbon stocks in maritime nations can be similar in magnitude to those of soils. Therefore, if human activities in these areas are managed, carbon stocks in the oceanic realm—particularly over continental margins—could be considered as part of national GHG inventories. Conclusions This study shows that marine sediment organic carbon stocks can be equal in size or exceed terrestrial carbon stocks of maritime nations. This provides motivation both for improved assessment of sedimentary carbon inventories and for reevaluation of the way that carbon stocks are assessed and valued. The

  13. Performance evaluation of nitrogen isotope ratio determination in marine and lacustrine sediments: An inter-laboratory comparison

    NARCIS (Netherlands)

    Bahlmann, E.; Bernasconi, S.M.; Bouillon, S.; Houtekamer, M.J.; Korntheuer, M.; Langenberg, F.; Mayr, C.; Metzke, M.; Middelburg, J.J.; Nagel, B.; Struck, U.; Voß, M.; Emeis, K.C.

    2010-01-01

    Nitrogen isotopes of organic matter are increasingly studied in marine biogeochemistry and geology, plant and animal ecology, and paleoceanography. Here, we present results of an inter-laboratory test on determination of nitrogen isotope ratios in marine and lacustrine sediments. Six different

  14. Concentration of 60Co by marine organisms through sediments

    International Nuclear Information System (INIS)

    Nakahara, Motokazu; Koyanagi, Taku; Saiki, Masamichi

    1976-01-01

    Uptake of 60 Co absorbed on sea sands by benthic marine organisms was observed in laboratory experiments, since the radioactive cobalt released from nuclear power plants or other establishments into coastal seawater trends to be absorbed on sea sediments and also various kinds of marine organisms live in bottom sediments. Few kinds of flatfishes (Limanda spp.) and shrimp (Trachypenaeus curvirostris) were reared in aquariums contained seawater and sea sands which were highly contaminated with 60 Co previously, and whole body retention and distribution of radioactivity were measured on the organisms taken up from the aquariums occasionally by a scintillation counter. Uptake of 60 Co from ingested sea sands was also observed on the flatfishes administrating the contaminated sands orally. Concentration of 60 Co by the flatfishes reared in the sands was not significant while the shrimp showed high retention of the radioactivity. The food habit of shrimp which usually feeds on organic detritus with other small benthic organisms is different from that of flatfishes, one of the carnivorous, and considered to bring the difference on the pathway of radionuclides concentration. Assimilation of 60 Co via the digestive tract of flatfishes through the sands was estimated as about 10 per cent of the administrated radioactivity. (auth.)

  15. Optimizing sample pretreatment for compound-specific stable carbon isotopic analysis of amino sugars in marine sediment

    Science.gov (United States)

    Zhu, R.; Lin, Y.-S.; Lipp, J. S.; Meador, T. B.; Hinrichs, K.-U.

    2014-09-01

    Amino sugars are quantitatively significant constituents of soil and marine sediment, but their sources and turnover in environmental samples remain poorly understood. The stable carbon isotopic composition of amino sugars can provide information on the lifestyles of their source organisms and can be monitored during incubations with labeled substrates to estimate the turnover rates of microbial populations. However, until now, such investigation has been carried out only with soil samples, partly because of the much lower abundance of amino sugars in marine environments. We therefore optimized a procedure for compound-specific isotopic analysis of amino sugars in marine sediment, employing gas chromatography-isotope ratio mass spectrometry. The whole procedure consisted of hydrolysis, neutralization, enrichment, and derivatization of amino sugars. Except for the derivatization step, the protocol introduced negligible isotopic fractionation, and the minimum requirement of amino sugar for isotopic analysis was 20 ng, i.e., equivalent to ~8 ng of amino sugar carbon. Compound-specific stable carbon isotopic analysis of amino sugars obtained from marine sediment extracts indicated that glucosamine and galactosamine were mainly derived from organic detritus, whereas muramic acid showed isotopic imprints from indigenous bacterial activities. The δ13C analysis of amino sugars provides a valuable addition to the biomarker-based characterization of microbial metabolism in the deep marine biosphere, which so far has been lipid oriented and biased towards the detection of archaeal signals.

  16. Radioactivity and metal concentrations in marine sediments associated with mining activities in Ierissos Gulf, North Aegean Sea, Greece

    International Nuclear Information System (INIS)

    Pappa, F.K.; Tsabaris, C.; Ioannidou, A.; Patiris, D.L.; Kaberi, H.; Pashalidis, I.; Eleftheriou, G.; Androulakaki, E.G.; Vlastou, R.

    2016-01-01

    Marine sediment samples were collected from Ierissos Gulf, N Aegean Sea, close to the coastal mining facilities. Measurements of radionuclide and metal concentrations, mineral composition and grain size distribution were performed. The concentrations of "2"2"6Ra, "2"3"5U and trace metals showed enhanced values in the port of Stratoni compared with those obtained near to Ierissos port. The dose rates received by marine biota were also calculated by the ERICA Assessment Tool and the results indicated no significant radiological risk. - Highlights: • Baseline information of radionuclides in a coastal area near a mining site. • Trace metals measurements in marine sediment. • Dose rates assessment for marine biota using ERICA Assessment Tool.

  17. Gold-bearing fluvial and associated tidal marine sediments of Proterozoic age in the Mporokoso Basin, northern Zambia

    Science.gov (United States)

    Andrews-Speed, C. P.

    1986-07-01

    The structurally defined Mporokoso Basin contains up to 5000 m of continental and marine clastic sediments and minor silicic volcanics which together form the Mporokoso Group. These rocks overlie unconformably a basement of silicic-intermediate igneous rocks and accumulated within the interval 1830-1130 Ma. This sedimentological study was restricted to the eastern end of the basin and was part of an assessment of the potential for palaeoplacer gold in the Mporokoso Group. At the base of the Mporokoso Group, the Mbala Formation consists of 1000-1500 m of purple sandstones and conglomerates deposited in a braided-stream system overlain by 500-1000 m of mature quartz arenites deposited in a tidal marine setting. A general coarsening-upward trend exists within the fluvial sediments. Sandy, distal braided-stream facies passes upwards into more proximal conglomeratic facies. In proximal sections, poorly sorted conglomerates form the top of the coarsening-up sequence which is 500-700 m thick. The overlying fluvial sediments fine upwards. The tidal marine sandstones at the top of the Mbala Formation resulted from reworking of fluvial sediments during a marine transgression. Well-exposed sections with fluvial conglomerates were studied in detail. Individual conglomerate bodies form sheets extending for hundreds of metres downstream and at least one hundred metres across stream, with little sign of deep scouring or channelling. They are generally matrix-supported. The whole fluvial sequence is characterised by a paucity of mud or silt. These conglomerates were deposited by large velocity, sheet flows of water which transported a bed-load of pebbles and sand. Most fine material settling out from suspension was eroded by the next flow. The great lateral and vertical extent and the uniformity of the fluvial sediments suggest that the sediments accumulated over an unconfined alluvial plain and that the tectonic evolution of the source area was relatively continuous and not

  18. Anthropogenic Forcing of Carbonate and Organic Carbon Preservation in Marine Sediments.

    Science.gov (United States)

    Keil, Richard

    2017-01-03

    Carbon preservation in marine sediments, supplemented by that in large lakes, is the primary mechanism that moves carbon from the active surficial carbon cycle to the slower geologic carbon cycle. Preservation rates are low relative to the rates at which carbon moves between surface pools, which has led to the preservation term largely being ignored when evaluating anthropogenic forcing of the global carbon cycle. However, a variety of anthropogenic drivers-including ocean warming, deoxygenation, and acidification, as well as human-induced changes in sediment delivery to the ocean and mixing and irrigation of continental margin sediments-all work to decrease the already small carbon preservation term. These drivers affect the cycling of both carbonate and organic carbon in the ocean. The overall effect of anthropogenic forcing in the modern ocean is to decrease delivery of carbon to sediments, increase sedimentary dissolution and remineralization, and subsequently decrease overall carbon preservation.

  19. Diversity and characterization of culturable fungi from marine sediment collected from St. Helena Bay, South Africa

    CSIR Research Space (South Africa)

    Mouton, M

    2012-08-01

    Full Text Available origins. It has not been proven whether these fungi merely survive the harsh environmental conditions presented by the ocean sediment, as opposed to playing an active role in this ecological niche. During this study, marine sediment was collected from St...

  20. Analysis of marine sediment and lobster hepatopancreas reference materials by instrumental photon activation

    International Nuclear Information System (INIS)

    Landsberger, S.; Davidson, W.F.

    1985-01-01

    By use of instrumental photon activation analysis, twelve trace (As, Ba, Cr, Co, Mn, Ni, Pb, Sb, Sr, U, Zn, and Zr) and eight minor (C, Na, Mg, Co, K, Ca, Tl, and Fe) elements were determined in a certified marine sediment standard reference material as well as eight trace (Mn, Ni, Cu, Zn, As, Sr, Cd, and Pb) and four minor (Na, Mg, Cl, and Ca) elements in a certified marine tissue (lobster hepatopancreas) standard reference material. The precision and accuracy of the present results when compared to the accepted values clearly demonstrate the reliability of this nondestructive technique and its applicability to marine environmental or marine geochemical studies. 24 references, 4 figures, 3 tables

  1. Observed gas hydrate morphologies in marine sediment

    Energy Technology Data Exchange (ETDEWEB)

    Holland, M.; Schultheiss, P.; Roberts, J.; Druce, M. [Geotek Ltd., Daventry, Northamptonshire (United Kingdom)

    2008-07-01

    The morphology of gas hydrate in marine sediments determines the basic physical properties of the sediment-hydrate matrix and provides information regarding the formation of gas hydrate deposits, and the nature of the disruption that will occur on dissociation. Small-scale morphology is useful in estimating the concentrations of gas hydrate from geophysical data. It is also important for predicting their response to climate change or commercial production. Many remote techniques for gas hydrate detection and quantification depend on hydrate morphology. In this study, morphology of gas hydrate was examined in HYACINTH pressure cores from recent seagoing expeditions. Visual and infrared observations from non-pressurized cores were also used. The expeditions and pressure core analysis were described in detail. This paper described the difference between two types of gas hydrate morphologies, notably pore-filling and grain-displacing. Last, the paper addressed the impact of hydrate morphology. It was concluded that a detailed morphology of gas hydrate is an essential component for a full understanding of the past, present, and future of any gas hydrate environment. 14 refs., 4 figs.

  2. A global survey of the distribution of free gas in marine sediments

    Science.gov (United States)

    Fleischer, Peter; Orsi, Tim; Richardson, Michael

    2003-10-01

    Following the work of Aubrey Anderson in the Gulf of Mexico, we have attempted to quantify the global distribution of free gas in shallow marine sediments, and have identified and indexed over one hundred documented cases in the scientific and engineering literature. Our survey confirms previous assumptions, primarily that gas bubbles are ubiquitous in the organic-rich muds of coastal waters and shallow adjacent seas. Acoustic turbidity as recorded during seismo-acoustic surveys is the most frequently cited evidence used to infer the presence of seafloor gas. Biogenic methane predominates within these shallow subbottom deposits. The survey also reveals significant imbalances in the geographic distribution of studies, which might be addressed in the future by accessing proprietary data or local studies with limited distribution. Because of their global prevalence, growing interest in gassy marine sediments is understandable as their presence has profound scientific, engineering and environmental implications.

  3. Profiling bacterial communities associated with sediment-based aquaculture bioremediation systems under contrasting redox regimes

    Science.gov (United States)

    Robinson, Georgina; Caldwell, Gary S.; Wade, Matthew J.; Free, Andrew; Jones, Clifford L. W.; Stead, Selina M.

    2016-12-01

    Deposit-feeding invertebrates are proposed bioremediators in microbial-driven sediment-based aquaculture effluent treatment systems. We elucidate the role of the sediment reduction-oxidation (redox) regime in structuring benthic bacterial communities, having direct implications for bioremediation potential and deposit-feeder nutrition. The sea cucumber Holothuria scabra was cultured on sediments under contrasting redox regimes; fully oxygenated (oxic) and redox stratified (oxic-anoxic). Taxonomically, metabolically and functionally distinct bacterial communities developed between the redox treatments with the oxic treatment supporting the greater diversity; redox regime and dissolved oxygen levels were the main environmental drivers. Oxic sediments were colonised by nitrifying bacteria with the potential to remediate nitrogenous wastes. Percolation of oxygenated water prevented the proliferation of anaerobic sulphate-reducing bacteria, which were prevalent in the oxic-anoxic sediments. At the predictive functional level, bacteria within the oxic treatment were enriched with genes associated with xenobiotics metabolism. Oxic sediments showed the greater bioremediation potential; however, the oxic-anoxic sediments supported a greater sea cucumber biomass. Overall, the results indicate that bacterial communities present in fully oxic sediments may enhance the metabolic capacity and bioremediation potential of deposit-feeder microbial systems. This study highlights the benefits of incorporating deposit-feeding invertebrates into effluent treatment systems, particularly when the sediment is oxygenated.

  4. The distribution of triclosan and methyl-triclosan in marine sediments of Barker Inlet, South Australia.

    Science.gov (United States)

    Fernandes, Milena; Shareef, Ali; Kookana, Rai; Gaylard, Sam; Hoare, Sonja; Kildea, Tim

    2011-04-01

    In this work, we investigated the transport and burial of triclosan and its methylated derivative, in surface sediments near the mouth of Barker Inlet in South Australia. The most likely source of this commonly used bactericide to the area is a wastewater outfall discharging at the confluence of the inlet with marine waters. Triclosan was detected in all samples, at concentrations (5-27 μg kg(-1)) comparable to values found in other surface sediments under the influence of marine wastewater outfalls. Its dispersal was closely associated with fine and organic-rich fractions of the sediments. Methyl-triclosan was detected in approximately half of the samples at concentrations compound was linked to both wastewater discharges and biological methylation of the parent compound. Wastewater-borne methyl-triclosan had a smaller spatial footprint than triclosan and was mostly deposited in close proximity to the outfall. In situ methylation of triclosan likely occurs at deeper depositional sites, whereas the absence of methyl-triclosan from shallower sediments was potentially explained by photodegradation of the parent compound. Based on partition equilibrium, a concentration of triclosan in the order of 1 μg L(-1) was estimated in sediment porewaters, a value lower than the threshold reported for harmful effects to occur in the couple of species of marine phytoplankton investigated to date. Methyl-triclosan presents a greater potential for bioaccumulation than triclosan, but the implications of its occurrence to aquatic ecosystem health are difficult to predict given the lack of ecotoxicological data in the current literature.

  5. Pathways and Microbiology of Thiosulfate Transformations and Sulfate Reduction in a Marine Sediment (Kattegat, Denmark)

    DEFF Research Database (Denmark)

    JØRGENSEN, BB; BAK, F.

    1991-01-01

    Reductive and oxidative pathways of the sulfur cycle were studied in a marine sediment by parallel radiotracer experiments with (SO4(2-))-S-35, (H2S)-S-35, and (S2O3(2-))-S-35 injected into undisturbed sediment cores. The distributions of viable populations of sulfate- and thiosulfate-reducing ba...

  6. Nitrogen isotopes in bulk marine sediment: linking seafloor observations with subseafloor records

    Directory of Open Access Journals (Sweden)

    J.-E. Tesdal

    2013-01-01

    Full Text Available The stable isotopes of nitrogen offer a unique perspective on changes in the nitrogen cycle, past and present. However, the presence of multiple forms of nitrogen in marine sediments can complicate the interpretation of bulk nitrogen isotope measurements. Although the large-scale global patterns of seafloor δ15N have been shown to match process-based expectations, small-scale heterogeneity on the seafloor, or alterations of isotopic signals during translation into the subseafloor record, could obscure the primary signals. Here, a public database of nitrogen isotope measurements is described, including both seafloor and subseafloor sediment samples ranging in age from modern to the Pliocene, and used to assess these uncertainties. In general, good agreement is observed between neighbouring seafloor sites within a 100 km radius, with 85% showing differences of < 1‰. There is also a good correlation between the δ15N of the shallowest (< 5 ka subseafloor sediments and neighbouring seafloor sites within a 100 km radius (R2 = 0.83, which suggests a reliable translation of sediments into the buried sediment record. Meanwhile, gradual δ15N decreases over multiple glacial–interglacial cycles appear to reflect post-depositional alteration in records from the deep sea (below 2000 m. We suggest a simple conceptual model to explain these 100-kyr-timescale changes in well-oxygenated, slowly accumulating sediments, which calls on differential loss rates for pools of organic N with different δ15N. We conclude that bulk sedimentary nitrogen isotope records are reliable monitors of past changes in the marine nitrogen cycle at most locations, and could be further improved with a better understanding of systematic post-depositional alteration. Furthermore, geochemical or environmental criteria should be developed in order to effectively identify problematic locations and to account for

  7. V isotope composition in modern marine hydrothermal sediments

    Science.gov (United States)

    Wu, F.; Owens, J. D.; Nielsen, S.; German, C. R.; Rachel, M.

    2017-12-01

    in the ocean. The fingerprint of δ51V between oxic sediments and hydrothermal flux are significantly different and should be easily discernible in the geologic record. Consequently, our results show that the removal of V from hydrothermal sediments has an important influence on the marine V cycle, which needs to be considered for future modern and paleoclimatic studies.

  8. Mineralogy, early marine diagenesis, and the chemistry of shallow-water carbonate sediments

    Science.gov (United States)

    Higgins, J. A.; Blättler, C. L.; Lundstrom, E. A.; Santiago-Ramos, D. P.; Akhtar, A. A.; Crüger Ahm, A.-S.; Bialik, O.; Holmden, C.; Bradbury, H.; Murray, S. T.; Swart, P. K.

    2018-01-01

    Shallow-water carbonate sediments constitute the bulk of sedimentary carbonates in the geologic record and are widely used archives of Earth's chemical and climatic history. One of the main limitations in interpreting the geochemistry of ancient carbonate sediments is the potential for post-depositional diagenetic alteration. In this study, we use paired measurements of calcium (44Ca/40Ca or δ44Ca) and magnesium (26Mg/24Mg or δ26Mg) isotope ratios in sedimentary carbonates and associated pore-fluids as a tool to understand the mineralogical and diagenetic history of Neogene shallow-water carbonate sediments from the Bahamas and southwest Australia. We find that the Ca and Mg isotopic composition of bulk carbonate sediments at these sites exhibits systematic stratigraphic variability that is related to both mineralogy and early marine diagenesis. The observed variability in bulk sediment Ca isotopes is best explained by changes in the extent and style of early marine diagenesis from one where the composition of the diagenetic carbonate mineral is determined by the chemistry of the fluid (fluid-buffered) to one where the composition of the diagenetic carbonate mineral is determined by the chemistry of the precursor sediment (sediment-buffered). Our results indicate that this process, together with variations in carbonate mineralogy (aragonite, calcite, and dolomite), plays a fundamental and underappreciated role in determining the regional and global stratigraphic expressions of geochemical tracers (δ13C, δ18O, major, minor, and trace elements) in shallow-water carbonate sediments in the geologic record. Our results also provide evidence that a large shallow-water carbonate sink that is enriched in 44Ca can explain the mismatch between the δ44/40Ca value of rivers and deep-sea carbonate sediments and call into question the hypothesis that the δ44/40Ca value of seawater depends on the mineralogy of primary carbonate precipitations (e.g. 'aragonite seas' and

  9. Environmental risk assessment of triclosan and ibuprofen in marine sediments using individual and sub-individual endpoints.

    Science.gov (United States)

    Pusceddu, F H; Choueri, R B; Pereira, C D S; Cortez, F S; Santos, D R A; Moreno, B B; Santos, A R; Rogero, J R; Cesar, A

    2018-01-01

    The guidelines for the Environmental Risk Assessment (ERA) of pharmaceuticals and personal care products (PPCP) recommend the use of standard ecotoxicity assays and the assessment of endpoints at the individual level to evaluate potential effects of PPCP on biota. However, effects at the sub-individual level can also affect the ecological fitness of marine organisms chronically exposed to PPCP. The aim of the current study was to evaluate the environmental risk of two PPCP in marine sediments: triclosan (TCS) and ibuprofen (IBU), using sub-individual and developmental endpoints. The environmental levels of TCS and IBU were quantified in marine sediments from the vicinities of the Santos submarine sewage outfall (Santos Bay, São Paulo, Brazil) at 15.14 and 49.0 ng g -1 , respectively. A battery (n = 3) of chronic bioassays (embryo-larval development) with a sea urchin (Lytechinus variegatus) and a bivalve (Perna perna) were performed using two exposure conditions: sediment-water interface and elutriates. Moreover, physiological stress through the Neutral Red Retention Time Assay (NRRT) was assessed in the estuarine bivalve Mytella charruana exposed to TCS and IBU spiked sediments. These compounds affected the development of L. variegatus and P. perna (75 ng g -1 for TCS and 15 ng g -1 for IBU), and caused a significant decrease in M. charruana lysosomal membrane stability at environmentally relevant concentrations (0.08 ng g -1 for TCS and 0.15 ng g -1 for IBU). Chemical and ecotoxicological data were integrated and the risk quotient estimated for TCS and IBU were higher than 1.0, indicating a high environmental risk of these compounds in sediments. These are the first data of sediment risk assessment of pharmaceuticals and personal care products of Latin America. In addition, the results suggest that the ERA based only on individual-level and standard toxicity tests may overlook other biological effects that can affect the health of marine organisms

  10. Heavy metal burden in coastal marine sediments of north west coast of India in relation to pollution

    Digital Repository Service at National Institute of Oceanography (India)

    Rokade, M.A.

    the concentrations of potentially toxic metals (Flegal and Wilhelmy, 1991; Hornberger et al., 1999). 6 Between 1850 and 1900 most of the Hg mining in the world occurred in the watershed of the San Francisco Bay. Hydraulic mining for gold mobilized sediments... to the ocean bottom water (about 0.2 8 μg/l). When anoxic diagenesis takes over, reduction of Fe also occurs with high levels of both the metals in pore waters. Several trace metals that are bound to particle surfaces are also mobilized with Mn and Fe...

  11. Evaluating spatial patterns of dioxins in sediments to aid determination of potential implications for marine reptiles

    Energy Technology Data Exchange (ETDEWEB)

    Hermanussen, S.; Gaus, C. [National Research Centre for Environmental Toxicology, Brisbane (Australia); Limpus, C.J. [Queensland Environmental Protection Agency, Brisbane (Australia); Paepke, O. [ERGO Forschungsgesellschaft mbH, Hamburg (Germany); Blanshard, W. [Sea World, Gold Coast (Australia); Connell, D. [School of Public Health, Griffith Univ., Brisbane (Australia)

    2004-09-15

    Recent investigations have identified elevated concentrations of polychlorinated dibenzo-p-dioxins (dioxins) in marine sediments and wildlife of Queensland, Australia. While it has been demonstrated that the contamination is widespread and predominantly land-based, limited information exists on the pathways and fate of these compounds within the near-shore marine system. This environment supports unique and threatened species including green sea turtles (Chelonia mydas). Adult green turtles are predominantly herbivorous, feeding on seagrass and algae. Apart from initial migration to feeding grounds (at {proportional_to}10 years of age) and intermittent migrations to breeding grounds (at {proportional_to}30-50 years and thereafter), green turtles remain and feed within relatively small home ranges. Long life-span (50 years or more), near-shore feeding grounds and highly specialized food requirements render green turtles potentially vulnerable to contaminant exposure. Recent studies have shown a relationship between PCDD/F concentrations found in herbivorous marine wildlife and concentrations in sediments of their habitats. Hence, the spatial evaluation of sediment PCDD/F distribution may assist the assessment of green turtle exposure and its potential implications. The present study provides baseline information on green turtle PCDD/F concentrations in Queensland, Australia and investigates exposure pathways. In addition, spatial distribution of PCDD/Fs in sediments from known green turtle feeding regions is assessed using geographic information systems. This represents the first stage of a large scale investigation into the exposure and sensitivity of marine reptiles to dioxins and dioxin-like compounds and to evaluate whether poor health status observed in some populations may be related to contaminant exposure.

  12. Viability of microcomputed tomography to study tropical marine worm galleries in humid muddy sediments

    Energy Technology Data Exchange (ETDEWEB)

    Pennafirme, Simone F., E-mail: sipennafirme@gmail.com [Universidade Federal Fluminense (UFF), Niteroi, RJ (Brazil). Inst. de Biologia. Dept. de Biologia Marinha; Machado, Alessandra S.; Lima, Inaya; Suzuki, Katia N.; Lopes, Ricardo T., E-mail: machado@lin.ufrj.br, E-mail: inaya@lin.ufrj.br, E-mail: norisuzuki6@yahoo.com.br, E-mail: ricardo@lin.ufj.br [Coordenacao dos Programas de Pos-Graduacao em Engenharia (COPPE/UFRJ), RJ (Brazil). Lab. de Instrumentacao Nuclear

    2013-07-01

    Bioturbation is an ecological process driven by organisms, which transports nutrients and gases from air/water to sediment through their galleries, by the time they feed, burrow and/or construct galleries. This exchange is vital to the maintenance of micro and macrobenthic organisms, mainly in muddy flat environments. Species with distinct galleries could create levels of bioturbation, affecting the benthic interactions. In this sense, it is fundamental developing a non-destructive method that permits identifying/quantifying the properties of these galleries. The recent advances in micro-computed tomography are allowing the high resolution 3D images generation. However, once muddy sediments are rich in organic matter and interstitial water, these would lead to motion artifacts which could, in turn, decrease the accuracy of galleries identification/quantification. In this context, the aim of this study was to develop a protocol which combines laboratory experiments and microtomography analysis in order to generate accurate 3D images of the small marine worm's galleries within humid muddy sediments. The sediment was collected at both muddy flats of Surui's and Itaipu lagoon's mangroves (RJ-Brazil), sieved (0.5mm mesh) and introduced with one individual of the marine worm Laeonereis acuta (Nereididae, Polychaeta) in each acrylic corer holders (4.4cm of internal diameter). High energy microtomography scanner was used to obtain 3D images and the setup calibration was 130 kV and 61 mA. Each acquisition image time was among 4h and 6h. Several procedures of drying remained water inside the cores were performed aiming obtaining images without movement artifacts due to circulating water, and this issue was one of the main studied parameter. In order to investigate possible chemical effects, 2ml of formalin (35%) with menthol were added to the surface of the cores. The results show that although the drying time was appropriated, the chemicals created bubbles

  13. Viability of microcomputed tomography to study tropical marine worm galleries in humid muddy sediments

    International Nuclear Information System (INIS)

    Pennafirme, Simone F.; Machado, Alessandra S.; Lima, Inaya; Suzuki, Katia N.; Lopes, Ricardo T.

    2013-01-01

    Bioturbation is an ecological process driven by organisms, which transports nutrients and gases from air/water to sediment through their galleries, by the time they feed, burrow and/or construct galleries. This exchange is vital to the maintenance of micro and macrobenthic organisms, mainly in muddy flat environments. Species with distinct galleries could create levels of bioturbation, affecting the benthic interactions. In this sense, it is fundamental developing a non-destructive method that permits identifying/quantifying the properties of these galleries. The recent advances in micro-computed tomography are allowing the high resolution 3D images generation. However, once muddy sediments are rich in organic matter and interstitial water, these would lead to motion artifacts which could, in turn, decrease the accuracy of galleries identification/quantification. In this context, the aim of this study was to develop a protocol which combines laboratory experiments and microtomography analysis in order to generate accurate 3D images of the small marine worm's galleries within humid muddy sediments. The sediment was collected at both muddy flats of Surui's and Itaipu lagoon's mangroves (RJ-Brazil), sieved (0.5mm mesh) and introduced with one individual of the marine worm Laeonereis acuta (Nereididae, Polychaeta) in each acrylic corer holders (4.4cm of internal diameter). High energy microtomography scanner was used to obtain 3D images and the setup calibration was 130 kV and 61 mA. Each acquisition image time was among 4h and 6h. Several procedures of drying remained water inside the cores were performed aiming obtaining images without movement artifacts due to circulating water, and this issue was one of the main studied parameter. In order to investigate possible chemical effects, 2ml of formalin (35%) with menthol were added to the surface of the cores. The results show that although the drying time was appropriated, the chemicals created bubbles within the

  14. Sources and fate of microplastics in marine and beach sediments of the Southern Baltic Sea-a preliminary study.

    Science.gov (United States)

    Graca, Bożena; Szewc, Karolina; Zakrzewska, Danuta; Dołęga, Anna; Szczerbowska-Boruchowska, Magdalena

    2017-03-01

    Microplastics' (particles size ≤5 mm) sources and fate in marine bottom and beach sediments of the brackish are strongly polluted Baltic Sea have been investigated. Microplastics were extracted using sodium chloride (1.2 g cm -3 ). Their qualitative identification was conducted using micro-Fourier-transform infrared spectroscopy (μFT-IR). Concentration of microplastics varied from 25 particles kg -1 d.w. at the open sea beach to 53 particles kg -1  d.w. at beaches of strongly urbanized bay. In bottom sediments, microplastics concentration was visibly lower compared to beach sediments (0-27 particles kg -1  d.w.) and decreased from the shore to the open, deep-sea regions. The most frequent microplastics dimensions ranged from 0.1 to 2.0 mm, and transparent fibers were predominant. Polyester, which is a popular fabrics component, was the most common type of microplastic in both marine bottom (50%) and beach sediments (27%). Additionally, poly(vinyl acetate) used in shipbuilding as well as poly(ethylene-propylene) used for packaging were numerous in marine bottom (25% of all polymers) and beach sediments (18% of all polymers). Polymer density seems to be an important factor influencing microplastics circulation. Low density plastic debris probably recirculates between beach sediments and seawater in a greater extent than higher density debris. Therefore, their deposition is potentially limited and physical degradation is favored. Consequently, low density microplastics concentration may be underestimated using current methods due to too small size of the debris. This influences also the findings of qualitative research of microplastics which provide the basis for conclusions about the sources of microplastics in the marine environment.

  15. {sup 137}Cs in marine sediments of Admiralty Bay, King George Island, Antarctica

    Energy Technology Data Exchange (ETDEWEB)

    Ferreira, Paulo Alves de Lima [Instituto Oceanográfico, Universidade de São Paulo (IO-USP), Pça. do Oceanográfico, 191, Butantã, SP, 05508 900 (Brazil); Ribeiro, Andreza Portella, E-mail: andrezpr@usp.br [Instituto Oceanográfico, Universidade de São Paulo (IO-USP), Pça. do Oceanográfico, 191, Butantã, SP, 05508 900 (Brazil); Mestrado de Gestão Ambiental e Sustentabilidade, Universidade Nove de Julho (UNINOVE), Avenida Francisco Matarazzo, 612, prédio C, andar térreo, Água Branca, São Paulo, SP, 05001 100 (Brazil); Nascimento, Mylene Giseli do; Martins, Cesar de Castro [Centro de Estudos do Mar, Universidade Federal do Paraná (CEM-UFPR), Av. Beira-mar, no number, Balneário Pontal do Sul, Pontal do Paraná, PR, 83255 971 (Brazil); Mahiques, Michel Michaelovitch de; Montone, Rosalinda Carmelo; Figueira, Rubens Cesar Lopes [Instituto Oceanográfico, Universidade de São Paulo (IO-USP), Pça. do Oceanográfico, 191, Butantã, SP, 05508 900 (Brazil)

    2013-01-15

    The radionuclide cesium-137 ({sup 137}Cs) is produced exclusively by anthropogenic processes and primarily by nuclear explosions. This study determined the reference inventory that is {sup 137}Cs associated with the element's original input, and utilized the levels of activity of this radionuclide previously measured in five sediment profiles collected from Admiralty Bay, Antarctica, to investigate the mobility of this element in the environment. {sup 137}Cs has a half-life of 30 years. Because of this, it is environmentally persistent and has been shown to accumulate in marine organisms. The mean reference inventory of this radionuclide in Admiralty Bay sediments, determined using high resolution gamma ray spectrometry, was 20.23 ± 8.94 Bq m{sup −2}, and within the ambient {sup 137}Cs activity range. A model of {sup 137}Cs diffusion–convection was applied to data collected from 1 cm intervals in sediment cores with the aim of providing insights with respect to this element's behavior in sediments. Model results showed a significant correlation between measured and modeled values using the concentrations of {sup 137}Cs, and estimated input into the system from the global fallout of past nuclear tests and expected values based on local sedimentation rates. Results highlight the importance of accounting for the vertical diffusion of {sup 137}Cs in marine sediments when used as a tracer for environmental processes and for assessing potential bioavailability. - Highlights: ► Cesium-137 ({sup 137}Cs) is produced exclusively by anthropogenic processes. ► A model of diffusion–convection simulated {sup 137}Cs environmental behavior. ► This is important for assessing the bioavailability of this toxic element. ► In Antarctica ice cover influenced the input to the sediments.

  16. Sediment Characteristics of Mergui Basin, Andaman Sea based on Multi-proxy Analyses

    Directory of Open Access Journals (Sweden)

    Rina Zuraida

    2018-02-01

    Full Text Available This paper presents the characteristics of sediment from core BS-36 (6°55.85’ S and 96°7.48’ E, 1147.1 m water depth that was acquired in the Mergui Basin, Andaman Sea. The analyses involved megascopic description, core scanning by multi-sensor core logger, and carbonate content measurement. The purpose of this study is to determine the physical and chemical characteristics of sediment to infer the depositional environment. The results show that this core can be divided into 5 lithologic units that represent various environmental conditions. The sedimentation of the bottom part, Units V and IV were inferred to be deposited in suboxic to anoxic bottom condition combined with high productivity and low precipitation. Unit III was deposited during high precipitation and oxic condition due to ocean ventilation. In the upper part, Units II and I occurred during higher precipitation, higher carbonate production and suboxic to anoxic condition. Keywords: sediment characteristics, Mergui Basin, Andaman Sea, suboxic, anoxic, oxic, carbonate content

  17. Methane oxidation in anoxic lake waters

    Science.gov (United States)

    Su, Guangyi; Zopfi, Jakob; Niemann, Helge; Lehmann, Moritz

    2017-04-01

    Freshwater habitats such as lakes are important sources of methante (CH4), however, most studies in lacustrine environments so far provided evidence for aerobic methane oxidation only, and little is known about the importance of anaerobic oxidation of CH4 (AOM) in anoxic lake waters. In marine environments, sulfate reduction coupled to AOM by archaea has been recognized as important sinks of CH4. More recently, the discorvery of anaerobic methane oxidizing denitrifying bacteria represents a novel and possible alternative AOM pathway, involving reactive nitrogen species (e.g., nitrate and nitrite) as electron acceptors in the absence of oxygen. We investigate anaerobic methane oxidation in the water column of two hydrochemically contrasting sites in Lake Lugano, Switzerland. The South Basin displays seasonal stratification, the development of a benthic nepheloid layer and anoxia during summer and fall. The North Basin is permanently stratified with anoxic conditions below 115m water depth. Both Basins accumulate seasonally (South Basin) or permanently (North Basin) large amounts of CH4 in the water column below the chemocline, providing ideal conditions for methanotrophic microorganisms. Previous work revealed a high potential for aerobic methane oxidation within the anoxic water column, but no evidence for true AOM. Here, we show depth distribution data of dissolved CH4, methane oxidation rates and nutrients at both sites. In addition, we performed high resolution phylogenetic analyses of microbial community structures and conducted radio-label incubation experiments with concentrated biomass from anoxic waters and potential alternative electron acceptor additions (nitrate, nitrite and sulfate). First results from the unamended experiments revealed maximum activity of methane oxidation below the redoxcline in both basins. While the incubation experiments neither provided clear evidence for NOx- nor sulfate-dependent AOM, the phylogenetic analysis revealed the

  18. Fate of dispersed marine fuel oil in sediment under pre-spill application strategy

    International Nuclear Information System (INIS)

    Jian Hua

    2004-01-01

    A comparison of the movement of dispersed oil in marine sediment under two dispersant application scenarios, applied prior to and after oil being spilled overboard, was examined. The pre-spill application scenario caused much less oil to be retained in the top sediment than post-spill scenario. The difference in oil retention in the top sediment between pre- and post-spill application scenario increased with increase in fuel oil temperature. For fuel oil above 40 o C, the difference in the effect of pre-spill application strategy under various water temperatures was negligible. When soap water was used as replacement for chemical dispersant, almost one-half as much oil was retained in the top sediment as that when using chemical dispersant. The adsorption of dispersed oil to the top sediment was almost proportionally decreased with doubling of soap dosage. (Author)

  19. Diatoms dominate the eukaryotic metatranscriptome during spring in coastal 'dead zone' sediments.

    Science.gov (United States)

    Broman, Elias; Sachpazidou, Varvara; Dopson, Mark; Hylander, Samuel

    2017-10-11

    An important characteristic of marine sediments is the oxygen concentration that affects many central metabolic processes. There has been a widespread increase in hypoxia in coastal systems (referred to as 'dead zones') mainly caused by eutrophication. Hence, it is central to understand the metabolism and ecology of eukaryotic life in sediments during changing oxygen conditions. Therefore, we sampled coastal 'dead zone' Baltic Sea sediment during autumn and spring, and analysed the eukaryotic metatranscriptome from field samples and after incubation in the dark under oxic or anoxic conditions. Bacillariophyta (diatoms) dominated the eukaryotic metatranscriptome in spring and were also abundant during autumn. A large fraction of the diatom RNA reads was associated with the photosystems suggesting a constitutive expression in darkness. Microscope observation showed intact diatom cells and these would, if hatched, represent a significant part of the pelagic phytoplankton biomass. Oxygenation did not significantly change the relative proportion of diatoms nor resulted in any major shifts in metabolic 'signatures'. By contrast, diatoms rapidly responded when exposed to light suggesting that light is limiting diatom development in hypoxic sediments. Hence, it is suggested that diatoms in hypoxic sediments are on 'standby' to exploit the environment if they reach suitable habitats. © 2017 The Author(s).

  20. Previously unknown evolutionary groups dominate the ssDNA gokushoviruses in oxic and anoxic waters of a coastal marine environment

    Directory of Open Access Journals (Sweden)

    Jessica M. Labonté

    2015-04-01

    Full Text Available Metagenomic studies have revealed that ssDNA phages from the family Microviridae subfamily Gokushovirinae are widespread in aquatic ecosystems. It is hypothesized that gokushoviruses occupy specialized niches, resulting in differences among genotypes traversing water column gradients. Here, we use degenerate primers that amplify a fragment of the gene encoding the major capsid protein to examine the diversity of gokushoviruses in Saanich Inlet, a seasonally anoxic fjord on the coast of Vancouver Island, British Columbia. Amplicon sequencing of samples from the mixed oxic surface (10 m and deeper anoxic (200 m layers indicated a diverse assemblage of gokushoviruses, with greater richness at 10 m than 200 m. A comparison of amplicon sequences with sequences selected on the basis of RFLP patterns from eight surface samples collected over a one-year period revealed that gokushovirus diversity was higher in spring and summer during stratification, and lower in fall and winter after deep-water renewal, consistent with seasonal variability within gokushovirus populations. Phylogenetic analysis of clustered amplicons revealed at least five new phylogenetic clades of previously unknown sequences, with the most abundant group associated with viruses that infect SUP05, a ubiquitous and abundant member of marine oxygen minimum zones. Our results provide persuasive evidence that, while specific gokushovirus genotypes may have a narrow host range, hosts for gokushoviruses in Saanich Inlet consist of a wide range of bacterial taxa, including SUP05, a taxonomic clade of gamma proteobacterial sulfur oxidizers. Members of SUP05 are abundant in Saanich Inlet and involved in carbon, nitrogen, and sulfur cycling along the redoxline; thus, gokushoviruses are likely important mortality agents of these bacteria and have consequent influences on biogeochemical cycling in this system.

  1. High abundance of JS-1- and Chloroflexi-related Bacteria in deeply buried marine sediments revealed by quantitative, real-time PCR.

    Science.gov (United States)

    Blazejak, Anna; Schippers, Axel

    2010-05-01

    Sequences of members of the bacterial candidate division JS-1 and the classes Anaerolineae and Caldilineae of the phylum Chloroflexi are frequently found in 16S rRNA gene clone libraries obtained from marine sediments. Using a newly designed quantitative, real-time PCR assay, these bacterial groups were jointly quantified in samples from near-surface and deeply buried marine sediments from the Peru margin, the Black Sea, and a forearc basin off the island of Sumatra. In near-surface sediments, sequences of the JS-1 as well as Anaerolineae- and Caldilineae-related Bacteria were quantified with significantly lower 16S rRNA gene copy numbers than the sequences of total Bacteria. In contrast, in deeply buried sediments below approximately 1 m depth, similar quantities of the 16S rRNA gene copies of these specific groups and Bacteria were found. This finding indicates that JS-1 and Anaerolineae- and Caldilineae-related Bacteria might dominate the bacterial community in deeply buried marine sediments and thus seem to play an important ecological role in the deep biosphere.

  2. Vertical activity distribution of dissimilatory nitrate reduction in coastal marine sediments

    DEFF Research Database (Denmark)

    Behrendt, A.; de Beer, D.; Stief, P.

    2013-01-01

    The relative importance of two dissimilatory nitrate reduction pathways, denitrification (DEN) and dissimilatory nitrate reduction to ammonium (DNRA), was investigated in intact sediment cores from five different coastal marine field sites (Dorum, Aarhus Bight, Mississippi Delta, Limfjord...... reduction was clearly dominated by DEN (59-131% of the total NO3- reduced) rather than by DNRA, irrespective of the sedimentary inventories of electron donors such as organic carbon, sulfide, and iron. Highest ammonium production via DNRA, accounting for up to 8.9% of the total NO3- reduced, was found...... was detected accounting for 37-77% of the total NO3- reduced. These contradictory results might be explained by enhanced NO3- availability for DNRA bacteria in the sediment slurries compared to the core-incubated sediments in which diffusion of NO3- from the water column may only reach DEN bacteria...

  3. In Situ Enhancement of Anaerobic Microbial Dechlorination of Polychlorinated Dibenzo-p-dioxins and Dibenzofurans in Marine and Estuarine Sediments

    National Research Council Canada - National Science Library

    Haeggblom, Max M; Fennell, Donna E; Kerkhof, Lee J

    2006-01-01

    ... that is associated with dredging, and decrease the cost of sediment management. Reductive dehalogenation is a promising mechanism for the removal of toxic organohalides from estuarine and marine sediments...

  4. Oxidative Uranium Release from Anoxic Sediments under Diffusion-Limited Conditions.

    Science.gov (United States)

    Bone, Sharon E; Cahill, Melanie R; Jones, Morris E; Fendorf, Scott; Davis, James; Williams, Kenneth H; Bargar, John R

    2017-10-03

    Uranium (U) contamination occurs as a result of mining and ore processing; often in alluvial aquifers that contain organic-rich, reduced sediments that accumulate tetravalent U, U(IV). Uranium(IV) is sparingly soluble, but may be mobilized upon exposure to nitrate (NO 3 - ) and oxygen (O 2 ), which become elevated in groundwater due to seasonal fluctuations in the water table. The extent to which oxidative U mobilization can occur depends upon the transport properties of the sediments, the rate of U(IV) oxidation, and the availability of inorganic reductants and organic electron donors that consume oxidants. We investigated the processes governing U release upon exposure of reduced sediments to artificial groundwater containing O 2 or NO 3 - under diffusion-limited conditions. Little U was mobilized during the 85-day reaction, despite rapid diffusion of groundwater within the sediments and the presence of nonuraninite U(IV) species. The production of ferrous iron and sulfide in conjunction with rapid oxidant consumption suggested that the sediments harbored large concentrations of bioavailable organic carbon that fueled anaerobic microbial respiration and stabilized U(IV). Our results suggest that seasonal influxes of O 2 and NO 3 - may cause only localized mobilization of U without leading to export of U from the reducing sediments when ample organic carbon is present.

  5. Contrasting oxygen dynamics in the freshwater isoetid Lobelia dortmanna and the marine seagrass Zostera marina

    DEFF Research Database (Denmark)

    Sand-Jensen, Kaj; Pedersen, Ole; Binzer, Thomas

    2005-01-01

    BACKGROUND: and Aims Submerged plants possess well-developed aerenchyma facilitating intra-plant gas-phase diffusion of O2 to below-ground tissues, which are usually buried in anoxic sediments. However, aquatic habitats differ in terms of O2 fluctuations in the water column and in O2 consumption...... roots and low O2 consumption of sediments means that sediment, aerenchyma and water are important O2 sources for respiration during the following night, while Z. marina relies on the water column as the sole source of O2 because its sediments are anoxic. These differences between L. dortmanna and Z...

  6. Sulphur enrichment in a sediment core from the central western continental margin of India

    Digital Repository Service at National Institute of Oceanography (India)

    Rao, P.S.; Rao, Ch.M.

    deposited in anoxic environment. Our study indicate that the excess sulphur is mainly due to the addition of sulphides from the shallow regions by mass sedimentation processes rather than water column sulphide formation as observed in anoxic environment...

  7. Salinity shifts in marine sediment: Importance of number of fluctuation rather than their intensities on bacterial denitrifying community.

    Science.gov (United States)

    Zaghmouri, Imen; Michotey, Valerie D; Armougom, Fabrice; Guasco, Sophie; Bonin, Patricia C

    2018-05-01

    The sensitivity of denitrifying community to salinity fluctuations was studied in microcosms filled with marine coastal sediments subjected to different salinity disturbances over time (sediment under frequent salinity changes vs sediment with "stable" salinity pattern). Upon short-term salinity shift, denitrification rate and denitrifiers abundance showed high resistance whatever the sediment origin is. Denitrifying community adapted to frequent salinity changes showed high resistance when salinity increases, with a dynamic nosZ relative expression level. Marine sediment denitrifying community, characterized by more stable pattern, was less resistant when salinity decreases. However, after two successive variations of salinity, it shifted toward the characteristic community of fluctuating conditions, with larger proportion of Pseudomonas-nosZ, exhibiting an increase of nosZ relative expression level. The impact of long-term salinity variation upon bacterial community was confirmed at ribosomal level with a higher percentage of Pseudomonas and lower proportion of nosZII clade genera. Copyright © 2018 Elsevier Ltd. All rights reserved.

  8. Investigating plutonium contamination in marine sediments off Fukushima coast following the Fukushima Dai-ichi Nuclear Power Plant accident

    International Nuclear Information System (INIS)

    Bu Wenting; Guo Qiuju; Zheng, Jian; Aono, Tatsuo; Tagami, Keiko; Uchida, Shigeo; Zhang, Jing; Yamada, Masatoshi

    2013-01-01

    The Fukushima Dai-ichi Nuclear Power Plant (FDNPP) accident has caused large amounts of anthropogenic radionuclides to be released into the atmosphere as well as directly discharged into the sea. To obtain the vertical distribution of Pu isotopes in marine sediments and to better assess the possible contamination from the FDNPP accident in the marine environment, activities of "2"3"9"+"2"4"0Pu and "2"4"1Pu, as well as the atom ratios of "2"4"0Pu/"2"3"9Pu and "2"4"1Pu/"2"3"9Pu, were investigated in a sediment core collected from the western North Pacific in July 2011. The observed vertical profile of "2"3"9"+"2"4"0Pu activities and "2"4"0Pu/"2"3"9Pu atom ratios showed no extra injection of Pu from the accident, indicating no immediate Pu contamination from the FDNPP accident in the marine sediments in the region investigated. (author)

  9. Natural attenuation potential of phenylarsenicals in anoxic groundwaters.

    Science.gov (United States)

    Hempel, Michael; Daus, Birgit; Vogt, Carsten; Weiss, Holger

    2009-09-15

    The extensive production of chemical warfare agents in the 20th century has led to serious contamination of soil and groundwater with phenyl arsenicals at former ammunition depots or warfare agent production sites worldwide. Most phenyl arsenicals are highly toxic for humans. The microbial degradation of phenylarsonic acid (PAA) and diphenylarsinic acid (DPAA) was investigated in microcosms made of anoxic groundwater/sediment mixtures taken from different depths of an anoxic, phenyl arsenical contaminated aquifer in Central Germany. DPAA was not transformed within 91 days incubation time in any of the microcosms. The removal of PAA can be described by a first order kinetics without a lag-phase (rate: 0.037 d(-1)). In sterilized microcosms, PAA concentrations always remained stable, demonstrating that PAA transformation was a biologically mediated process. PAA transformation occurred under sulfate-reducing conditions due to sulfate consumption and production of sulfide. The addition of lactate (1 mM), a typical substrate of sulfate-reducing bacteria, increased the transformation rate of PAA significantly up to 0.134 d(-1). The content of total arsenic was considerably reduced (> 75%). Intermediates of PAA transformation were detected by high performance liquid chromatography-inductively coupled plasma mass spectrometry (HPLC-ICP-MS). Experiments with a pure strain and sterile controls of Desulfovibrio gigas spiked with PAA showed that the elimination process is linked to the presence of sulfide formed through bacterial activity. Phenyl arsenicals were likely immobilized in the sedimentthrough sulfur substitution and a subsequent sulfur bond under the prevailing sulfate reducing condition. The results of this study indicate that PAA can undergo microbiologically mediated transformation in anoxic aquifers, leading to reduced concentrations in groundwater, which indicate a (enhancend) natural attenuation potential.

  10. Metal concentrations and mobility in marine sediment and groundwater in coastal reclamation areas: A case study in Shenzhen, China

    International Nuclear Information System (INIS)

    Chen Kouping; Jiao, Jiu J.

    2008-01-01

    The concentrations of metals in the buried marine sediment and groundwater were differently affected by land reclamation. Nine metals (V, Cr, Mn, Co, Ni, Cu, Zn, Cd and Pb) in sediment and coastal groundwater from reclamation areas in Shenzhen were examined. The gradually decreased concentrations (V, Cr, Mn, Ni, Cu, Zn) in sediment and relatively higher concentrations (V, Cr, Mn, Co, Ni, Cu and Cd) in groundwater within reclamation areas were observed. The increase of V, Cr, Mn, Ni, Cu and Cd concentrations in groundwater within reclamation areas subsequently after land reclamation should be resulted from the mobilization of these metals accumulated in the sediment. These metals appear to be easily mobilized from solid phase to solution phase after reclamation. The physico-chemical changes such as reduction in pH and salinity in water environment induced by land reclamation appear to be responsible for metal mobility in the sediment-groundwater system. - Metals in coastal groundwater and marine sediment are affected by land reclamation

  11. Sedimentation rate in the Baltic Sea

    International Nuclear Information System (INIS)

    Ilus, E.; Mattila, J.; Klemola, S.; Ikaeheimonen, T.K.; Niemisto, L.

    2001-01-01

    Varying redox conditions may affect the occurrence and concentrations of certain radionuclides in the surface layers of sediments and in near-bottom waters by causing remobilization of radionuclides from surface sediments to the overlying water and their settling back into the sediment. In recent decades about 70.000 km 2 of the sea bottom in the deepest part of the Baltic Sea (about 19% of its total area) have withstood almost continuous anoxic conditions; thus, it is important to know to what extent depletion of oxygen can affect the behaviour of these radionuclides in near-bottom waters. The aim of the project was to resolve the above question in a coastal basin periodically undergoing anoxic conditions. Radioecological processes in sediments and in near-bottom water under varying redoxconditions were studied in the deep area of the Haestholmsfjaerden Bay in Loviisa (eastern Gulf of Finland) in 1995-1996. The Haestholmsfjaerden Bay is a semienclosed basin between the mainland and the archipelago and is connected with the open Gulf of Finland only through narrow, shallow sounds: In 1995, total depletion of oxygen occurred in the hypolimnion of Haestholmsfjaerden Bay during 2 periods in late summer and autumn. In 1996, oxygen conditions were the worst ever observed in the Haestholmsfjaerden deep. During early autumn anoxic conditions prevailed for more than 1 month in the near-bottom water. The highest total phosphorus and total nitrogen concentrations in the near-bottom water during these periods were 20- and 4- fold compared with the corresponding values in surface water. According to the results obtained in this project, remobilization of 137 Cs and 239,240 Pu from sediments to near-bottom water is negligible or non-existent in the Haestholmsfjaerden deep. If it does occur, however, it may be so slight that it is not possible to observe with the methods used in this study. Although the anoxic periods are quite short in the Haestholmsfjaerden deep, they are of

  12. Reactive transport modeling of nitrogen in Seine River sediments

    Science.gov (United States)

    Akbarzadeh, Z.; Laverman, A.; Raimonet, M.; Rezanezhad, F.; Van Cappellen, P.

    2016-02-01

    Biogeochemical processes in sediments have a major impact on the fate and transport of nitrogen (N) in river systems. Organic matter decomposition in bottom sediments releases inorganic N species back to the stream water, while denitrification, anammox and burial of organic matter remove bioavailable N from the aquatic environment. To simulate N cycling in river sediments, a multi-component reactive transport model has been developed in MATLAB®. The model includes 3 pools of particulate organic N, plus pore water nitrate, nitrite, nitrous oxide and ammonium. Special attention is given to the production and consumption of nitrite, a N species often neglected in early diagenetic models. Although nitrite is usually considered to be short-lived, elevated nitrite concentrations have been observed in freshwater streams, raising concerns about possible toxic effects. We applied the model to sediment data sets collected at two locations in the Seine River, one upstream, the other downstream, of the largest wastewater treatment plant (WWTP) of the Paris conurbation. The model is able to reproduce the key features of the observed pore water depth profiles of the different nitrogen species. The modeling results show that the presence of oxygen in the overlying water plays a major role in controlling the exchanges of nitrite between the sediments and the stream water. In August 2012, sediments upstream of the WWTP switch from being a sink to a source of nitrite as the overlying water becomes anoxic. Downstream sediments remain a nitrite sink in oxic and anoxic conditions. Anoxic bottom waters at the upstream location promote denitrification, which produces nitrite, while at the downstream site, anammox and DNRA are important removal processes of nitrite.

  13. Anoxic sediments off Central Peru record interannual to multidecadal changes of climate and upwelling ecosystem during the last two centuries

    Science.gov (United States)

    Gutiérrez, D.; Sifeddine, A.; Reyss, J. L.; Vargas, G.; Velazco, F.; Salvatteci, R.; Ferreira, V.; Ortlieb, L.; Field, D.; Baumgartner, T.; Boussafir, M.; Boucher, H.; Valdés, J.; Marinovic, L.; Soler, P.; Tapia, P.

    2006-01-01

    layers including large El Niño events (1982-1983, 1986-1987 and 1997-1998), with the largest peak during the 1997-1998 episode. These results confirm that anoxic sediments off Pisco are suitable archives to investigate interannual and decadal changes in oceanographic conditions and climate of the northern Humboldt upwelling system.

  14. Anoxic sediments off Central Peru record interannual to multidecadal changes of climate and upwelling ecosystem during the last two centuries

    Directory of Open Access Journals (Sweden)

    D. Gutiérrez

    2006-01-01

    illite in layers including large El Niño events (1982-1983, 1986-1987 and 1997-1998, with the largest peak during the 1997-1998 episode. These results confirm that anoxic sediments off Pisco are suitable archives to investigate interannual and decadal changes in oceanographic conditions and climate of the northern Humboldt upwelling system.

  15. Certification of Trace Element Mass Fractions in IAEA-457 Marine Sediment Sample

    International Nuclear Information System (INIS)

    2013-01-01

    The primary goal of the IAEA Environment Laboratories in Monaco (NAEL) is to help Member States understand, monitor and protect the marine environment. The major impact exerted by large coastal cities on marine ecosystems is therefore of great concern to the IAEA and its Environment Laboratories. Given that marine pollution assessments of such impacts depend on accurate knowledge of contaminant concentrations in various environmental compartments, the NAEL has assisted national laboratories and regional laboratory networks through its Reference Products for Environment and Trade programme since the early 1970s. Quality assurance (QA), quality control (QC) and associated good laboratory practice are essential components of all marine environmental monitoring studies. QC procedures are commonly based on the analysis of certified reference materials and reference samples in order to validate analytical methods used in monitoring studies and to assess reliability and comparability of measurement data. QA can be realized by participation in externally organized laboratory performance studies, also known as interlaboratory comparisons, which compare and evaluate analytical performance and measurement capabilities of participating laboratories. Data that are not based on adequate QA/QC can be erroneous and their misuse can lead to incorrect environmental management decisions. A marine sediment sample with certified mass fractions for Ag, Al, As, Cd, Cr, Co, Cu, Fe, Hg, Li, Mn, Ni, Pb, Sn, Sr, V and Zn was recently produced by the NAEL in the frame of a project between the IAEA and the Korea Institute of Ocean Science and Technology. This report describes the sample preparation methodology, the material homogeneity and stability study, the selection of laboratories, the evaluation of results from the certification campaign and the assignment of property values and their associated uncertainty. As a result, reference values for mass fractions and associated expanded

  16. Shear-wave velocity of marine sediments offshore Taiwan using ambient seismic noise

    Science.gov (United States)

    Lin, Yu-Tse; Lin, Jing-Yi; Kuo-Chen, Hao; Yeh, Yi-Chin; Cheng, Win-Bin

    2017-04-01

    Seismic ambient noise technology has many advantages over the traditional two-station method. The most important one is that noise is happening all the time and it can be widely and evenly distributed. Thus, the Green's Function of any station pair can be obtained through the data cross-correlation process. Many related studies have been performed to estimate the velocity structures based on the inland area. Only a few studies were reported for the marine area due to the relatively shorter recording time of ocean bottom seismometers (OBS) deployment and the high cost of the marine experiment. However, the understanding about the shear-wave velocity (Vs) of the marine sediments is very crucial for the hazard assessment related to submarine landslides, particularly with the growing of submarine resources exploration. In this study, we applied the ambient noise technique to four OBS seismic networks located offshore Taiwan in the aim of getting more information about the noise sources and having the preliminary estimation for the Vs of the marine sediments. Two of the seismic networks were deployed in the NE part of Taiwan, near the Ryukyu subduction system, whereas the others were in the SW area, on the continental margin rich in gas hydrate. Generally, ambient seismic noise could be associated with wind, ocean waves, rock fracturing and anthropogenic activity. In the southwestern Taiwan, the cross-correlation function obtained from two seismic networks indicate similar direction, suggestion that the source from the south part of the network could be the origin of the noise. However, the two networks in the northeastern Taiwan show various source direction, which could be caused by the abrupt change of bathymetry or the volcanic degassing effect frequently observed by the marine geophysical method in the area. The Vs determined from the dispersion curve shows a relatively higher value for the networks in the Okinawa Trough (OT) off NE Taiwan than that in the

  17. Electrolysis-driven bioremediation of crude oil-contaminated marine sediments.

    Science.gov (United States)

    Bellagamba, Marco; Cruz Viggi, Carolina; Ademollo, Nicoletta; Rossetti, Simona; Aulenta, Federico

    2017-09-25

    Bioremediation is an effective technology to tackle crude oil spill disasters, which takes advantage of the capacity of naturally occurring microorganisms to degrade petroleum hydrocarbons under a range of environmental conditions. The enzymatic process of breaking down oil is usually more rapid in the presence of oxygen. However, in contaminated sediments, oxygen levels are typically too low to sustain the rapid and complete biodegradation of buried hydrocarbons. Here, we explored the possibility to electrochemically manipulate the redox potential of a crude oil-contaminated marine sediment in order to establish, in situ, conditions that are conducive to contaminants biodegradation by autochthonous microbial communities. The proposed approach is based on the exploitation of low-voltage (2V) seawater electrolysis to drive oxygen generation (while minimizing chlorine evolution) on Dimensionally Stable Anodes (DSA) placed within the contaminated sediment. Results, based on a laboratory scale setup with chronically polluted sediments spiked with crude oil, showed an increased redox potential and a decreased pH in the vicinity of the anode of 'electrified' treatments, consistent with the occurrence of oxygen generation. Accordingly, hydrocarbons biodegradation was substantially accelerated (up to 3-times) compared to 'non-electrified' controls, while sulfate reduction was severely inhibited. Intermittent application of electrolysis proved to be an effective strategy to minimize the energy requirements of the process, without adversely affecting degradation performance. Taken as a whole, this study suggests that electrolysis-driven bioremediation could be a sustainable technology for the management of contaminated sediments. Copyright © 2016 Elsevier B.V. All rights reserved.

  18. Microbial diversity of an anoxic zone of a hydroelectric power station reservoir in Brazilian Amazonia.

    Science.gov (United States)

    Graças, Diego A; Miranda, Paulo R; Baraúna, Rafael A; McCulloch, John A; Ghilardi, Rubens; Schneider, Maria Paula C; Silva, Artur

    2011-11-01

    Microbial diversity was evaluated in an anoxic zone of Tucuruí Hydroelectric Power Station reservoir in Brazilian Amazonia using a culture-independent approach by amplifying and sequencing fragments of the 16S rRNA gene using metagenomic DNA as a template. Samples obtained from the photic, aphotic (40 m) and sediment (60 m) layers were used to construct six 16S rDNA libraries containing a total of 1,152 clones. The sediment, aphotic and photic layers presented 64, 33 and 35 unique archaeal operational taxonomic units (OTUs). The estimated richness of these layers was evaluated to be 153, 106 and 79 archaeal OTUs, respectively, using the abundance-based coverage estimator (ACE) and 114, 83 and 77 OTUs using the Chao1 estimator. For bacterial sequences, 114, 69 and 57 OTUs were found in the sediment, aphotic and photic layers, which presented estimated richnesses of 1,414, 522 and 197 OTUs (ACE) and 1,059, 1,014 and 148 OTUs (Chao1), respectively. Phylogenetic analyses of the sequences obtained revealed a high richness of microorganisms which participate in the carbon cycle, namely, methanogenic archaea and methanotrophic proteobacteria. Most sequences obtained belong to non-culturable prokaryotes. The present study offers the first glimpse of the huge microbial diversity of an anoxic area of a man-made lacustrine environment in the tropics.

  19. Bacterial diversity in oil-polluted marine coastal sediments.

    Science.gov (United States)

    Acosta-González, Alejandro; Marqués, Silvia

    2016-04-01

    Marine environments harbour a persistent microbial seed which can be shaped by changes of the environmental conditions such as contamination by petroleum components. Oil spills, together with small but continuous discharges of oil from transportation and recreational activities, are important sources of hydrocarbon pollution within the marine realm. Consequently, prokaryotic communities have become well pre-adapted toward oil pollution, and many microorganisms that are exposed to its presence develop an active degradative response. The natural attenuation of oil pollutants, as has been demonstrated in many sites, is modulated according to the intrinsic environmental properties such as the availability of terminal electron acceptors and elemental nutrients, together with the degree of pollution and the type of hydrocarbon fractions present. Whilst dynamics in the bacterial communities in the aerobic zones of coastal sediments are well characterized and the key players in hydrocarbon biodegradation have been identified, the subtidal ecology of the anaerobic community is still not well understood. However, current data suggest common patterns of response in these ecosystems. Copyright © 2015 Elsevier Ltd. All rights reserved.

  20. Instrumental neutron activation analysis of proposed marine sediment reference material (IAEA-158)

    International Nuclear Information System (INIS)

    Siddique, N.; Waheed, S.

    2009-01-01

    IAEA-158, sediment prepared by the International Atomic Energy Agency -Marine Environmental Laboratory (IAEA-MEL), Monaco was received under the IAEA Analytical Quality Control Services (AQCS) Intercomparison Programme. Instrumental Neutron Activation Analysis (INAA) was used to determine AI, As, Br, Ce, Co, Cr, Cs, Eu, Fe, Hf, K, La, Lu, Mn, Na, Nd, Rb, Sb, Sc, Se, Sm, Ta, Tb, Th, V, Vb and Zn in this proposed reference material (RM). Four different irradiation protocols were adopted using a miniature neutron source reactor (MNSR) by varying the irradiation, cooling and counting times. IAEA-405 (Estuarine Sediment) and IAEA-SLI (Lake Sediment) were used as compatible matrix reference materials for quality assurance (QA) purposes. Good agreement between our data and lAEA certified values was obtained providing confidence in the reported data. (author)

  1. Anoxic or aerial survival of bivalves and other euryoxic invertebrates as a useful response to environmental stress - A comprehensive review

    NARCIS (Netherlands)

    De Zwaan, A.; Eertman, R.H.M.

    1996-01-01

    Laboratory and field studies have demonstrated the applicability of anoxic/aerial survival as an early warning indicator of contaminant induced stress. The effects of xenobiotics, including heavy metals, organometals and organics as well as contaminated field sediments have been investigated. The

  2. Validation of a method to measure plutonium levels in marine sediments in Cuba

    International Nuclear Information System (INIS)

    Sibello Hernández, Rita Y.; Cartas Aguila, Héctor A.; Cozzella, María Letizia

    2008-01-01

    The main objective of this research was to develop and to validate a method of radiochemical separation of plutonium, suitable from the economic and practical point of view, in Cuba conditions. This method allowed to determine plutonium activity levels in the marine sediments from Cienfuegos Bay. The selected method of radiochemical separation was that of anionic chromatography and the measure technique was the quadrupole inductively coupled plasma mass spectrometry. The method was applied to a certified reference material, six repetitions were carried out and a good correspondence between the average measured value and the average certified value of plutonium was achieved, so the trueness of the method was demonstrated. It was also proven the precision of the method, since it was obtained a variation coefficient of 11% at 95% confidence level. The obtained results show that the presence of plutonium in the analyzed marine sediment samples is only due to the global radioactive fallout. (author)

  3. Study of the sediment contamination levels in a mangrove swamp polluted by a marine oil spill

    Energy Technology Data Exchange (ETDEWEB)

    Wong, T.W.Y.; Ke, L.; Wong, Y.S.; Tam, N.F.Y. [City University of Hong Kong, Hong Kong SAR (China)

    2002-07-01

    The pattern of oil retention in mangrove sediments was studied in an effort to determine the temporal changes of petroleum hydrocarbon concentrations and composition several months after oil spills occur. Mangroves are inter-tidal wetlands in tropical and subtropical coastlines. Due to the anoxic and water logging characteristics of mangrove sediments, oil residues linger much longer in these wetlands compared to other coastal habitats. In November 2000, an accidental oil spill occurred in the Pearl River Estuary in which approximately 230,000 litres of crude oil was leaked from an oil tanker. The spilled oil migrated to the YiO, a typical mangrove swamp in Hong Kong Special Administrative Region. The degree of oil contamination in the sediments depended on the sediment texture and topography of the mangrove. The total petroleum hydrocarbon (TPH) concentration of the sediments in the most affected area near a freshwater creek flowing into the sea was 130 times higher than normal, one month after the accident. The mean TPH concentration was 2862 ug/g of dry sediment while the mean carbon preference index was 1.22 compared to the background value of 3.97. The temporal changes of the petroleum hydrocarbon level in 5 defined areas were examined for 7 months after the spill. The most polluted area next to the creek was determined to have very high TPH levels in the muddy sediments even 7 months after the spill. Oil residues infiltrated as deep as 20 cm into the sediments, making it more difficult to degrade than surface pollution and posing long-term adverse effects on trees in the area. It was determined that with growing industrialization and increasing demands for fuel and energy supply, mangroves in South China should be ranked as top priority for protection from oil spills. 19 refs., 6 tabs., 6 figs.

  4. Study of the sediment contamination levels in a mangrove swamp polluted by a marine oil spill

    International Nuclear Information System (INIS)

    Wong, T.W.Y.; Ke, L.; Wong, Y.S.; Tam, N.F.Y.

    2002-01-01

    The pattern of oil retention in mangrove sediments was studied in an effort to determine the temporal changes of petroleum hydrocarbon concentrations and composition several months after oil spills occur. Mangroves are inter-tidal wetlands in tropical and subtropical coastlines. Due to the anoxic and water logging characteristics of mangrove sediments, oil residues linger much longer in these wetlands compared to other coastal habitats. In November 2000, an accidental oil spill occurred in the Pearl River Estuary in which approximately 230,000 litres of crude oil was leaked from an oil tanker. The spilled oil migrated to the YiO, a typical mangrove swamp in Hong Kong Special Administrative Region. The degree of oil contamination in the sediments depended on the sediment texture and topography of the mangrove. The total petroleum hydrocarbon (TPH) concentration of the sediments in the most affected area near a freshwater creek flowing into the sea was 130 times higher than normal, one month after the accident. The mean TPH concentration was 2862 ug/g of dry sediment while the mean carbon preference index was 1.22 compared to the background value of 3.97. The temporal changes of the petroleum hydrocarbon level in 5 defined areas were examined for 7 months after the spill. The most polluted area next to the creek was determined to have very high TPH levels in the muddy sediments even 7 months after the spill. Oil residues infiltrated as deep as 20 cm into the sediments, making it more difficult to degrade than surface pollution and posing long-term adverse effects on trees in the area. It was determined that with growing industrialization and increasing demands for fuel and energy supply, mangroves in South China should be ranked as top priority for protection from oil spills. 19 refs., 6 tabs., 6 figs

  5. Marine Microbial Gene Abundance and Community Composition in Response to Ocean Acidification and Elevated Temperature in Two Contrasting Coastal Marine Sediments

    Directory of Open Access Journals (Sweden)

    Ashleigh R. Currie

    2017-08-01

    Full Text Available Marine ecosystems are exposed to a range of human-induced climate stressors, in particular changing carbonate chemistry and elevated sea surface temperatures as a consequence of climate change. More research effort is needed to reduce uncertainties about the effects of global-scale warming and acidification for benthic microbial communities, which drive sedimentary biogeochemical cycles. In this research, mesocosm experiments were set up using muddy and sandy coastal sediments to investigate the independent and interactive effects of elevated carbon dioxide concentrations (750 ppm CO2 and elevated temperature (ambient +4°C on the abundance of taxonomic and functional microbial genes. Specific quantitative PCR primers were used to target archaeal, bacterial, and cyanobacterial/chloroplast 16S rRNA in both sediment types. Nitrogen cycling genes archaeal and bacterial ammonia monooxygenase (amoA and bacterial nitrite reductase (nirS were specifically targeted to identify changes in microbial gene abundance and potential impacts on nitrogen cycling. In muddy sediment, microbial gene abundance, including amoA and nirS genes, increased under elevated temperature and reduced under elevated CO2 after 28 days, accompanied by shifts in community composition. In contrast, the combined stressor treatment showed a non-additive effect with lower microbial gene abundance throughout the experiment. The response of microbial communities in the sandy sediment was less pronounced, with the most noticeable response seen in the archaeal gene abundances in response to environmental stressors over time. 16S rRNA genes (amoA and nirS were lower in abundance in the combined stressor treatments in sandy sediments. Our results indicated that marine benthic microorganisms, especially in muddy sediments, are susceptible to changes in ocean carbonate chemistry and seawater temperature, which ultimately may have an impact upon key benthic biogeochemical cycles.

  6. Marine ecology

    International Nuclear Information System (INIS)

    Anon.

    1977-01-01

    Studies on marine ecology included marine pollution; distribution patterns of Pu and Am in the marine waters, sediments, and organisms of Bikini Atoll and the influence of physical, chemical, and biological factors on their movements through marine biogeochemical systems; transfer and dispersion of organic pollutants from an oil refinery through coastal waters; transfer of particulate pollutants, including sediments dispersed during construction of offshore power plants; and raft culture of the mangrove oysters

  7. Evaluation of Near-Surface Gases in Marine Sediments to Assess Subsurface Petroleum Gas Generation and Entrapment

    Directory of Open Access Journals (Sweden)

    Michael A. Abrams

    2017-05-01

    Full Text Available Gases contained within near-surface marine sediments can be derived from multiple sources: shallow microbial activity, thermal cracking of organic matter and inorganic materials, or magmatic-mantle degassing. Each origin will display a distinctive hydrocarbon and non-hydrocarbon composition as well as compound-specific isotope signature and thus the interpretation of origin should be relatively straightforward. Unfortunately, this is not always the case due to in situ microbial alteration, non-equilibrium phase partitioning, mixing, and fractionation related to the gas extraction method. Sediment gases can reside in the interstitial spaces, bound to mineral or organic surfaces and/or entrapped in carbonate inclusions. The interstitial sediment gases are contained within the sediment pore space, either dissolved in the pore waters (solute or as free (vapour gas. The bound gases are believed to be attached to organic and/or mineral surfaces, entrapped in structured water or entrapped in authigenic carbonate inclusions. The purpose of this paper is to provide a review of the gas types found within shallow marine sediments and examine issues related to gas sampling and extraction. In addition, the paper will discuss how to recognise mixing, alteration and fractionation issues to best interpret the seabed geochemical results and determine gas origin to assess subsurface petroleum gas generation and entrapment.

  8. Three manganese oxide-rich marine sediments harbor similar communities of acetate-oxidizing manganese-reducing bacteria

    OpenAIRE

    Vandieken, Verona; Pester, Michael; Finke, Niko; Hyun, Jung-Ho; Friedrich, Michael W; Loy, Alexander; Thamdrup, Bo

    2012-01-01

    Dissimilatory manganese reduction dominates anaerobic carbon oxidation in marine sediments with high manganese oxide concentrations, but the microorganisms responsible for this process are largely unknown. In this study, the acetate-utilizing manganese-reducing microbiota in geographically well-separated, manganese oxide-rich sediments from Gullmar Fjord (Sweden), Skagerrak (Norway) and Ulleung Basin (Korea) were analyzed by 16S rRNA-stable isotope probing (SIP). Manganese reduction was the p...

  9. Monitoring of the booster biocide dichlofluanid in water and marine sediment of Greek marinas

    NARCIS (Netherlands)

    Hamwijk, C.; Schouten, A.; Foekema, E.M.; Ravensberg, J.C.; Collombon, M.T.; Schmidt, K.; Kugler, M.

    2005-01-01

    Dichlofluanid (N-dichlorofluoromethylthio-N′-dimethyl-N- phenylsulphamide) is used as booster biocide in antifouling paints. The occurrence of dichlofluanid and its metabolite DMSA (N′-dimethyl-N-phenyl- sulphamide) was monitored in seawater and marine sediment from three Greek marinas. Seawater and

  10. Relative Abundance and Diversity of Bacterial Methanotrophs at the Oxic?Anoxic Interface of the Congo Deep-Sea Fan

    OpenAIRE

    Bessette, Sandrine; Moalic, Yann; Gautey, S?bastien; Lesongeur, Fran?oise; Godfroy, Anne; Toffin, Laurent

    2017-01-01

    Sitting at ∼5,000 m water depth on the Congo-Angola margin and ∼760 km offshore of the West African coast, the recent lobe complex of the Congo deep-sea fan receives large amounts of fluvial sediments (3–5% organic carbon). This organic-rich sedimentation area harbors habitats with chemosynthetic communities similar to those of cold seeps. In this study, we investigated relative abundance, diversity and distribution of aerobic methane-oxidizing bacteria (MOB) communities at the oxic–anoxic in...

  11. Microbial Diversity in Sulfate-Reducing Marine Sediment Enrichment Cultures Associated with Anaerobic Biotransformation of Coastal Stockpiled Phosphogypsum (Sfax, Tunisia

    Directory of Open Access Journals (Sweden)

    Hana Zouch

    2017-08-01

    Full Text Available Anaerobic biotechnology using sulfate-reducing bacteria (SRB is a promising alternative for reducing long-term stockpiling of phosphogypsum (PG, an acidic (pH ~3 by-product of the phosphate fertilizer industries containing high amounts of sulfate. The main objective of this study was to evaluate, for the first time, the diversity and ability of anaerobic marine microorganisms to convert sulfate from PG into sulfide, in order to look for marine SRB of biotechnological interest. A series of sulfate-reducing enrichment cultures were performed using different electron donors (i.e., acetate, formate, or lactate and sulfate sources (i.e., sodium sulfate or PG as electron acceptors. Significant sulfide production was observed from enrichment cultures inoculated with marine sediments, collected near the effluent discharge point of a Tunisian fertilizer industry (Sfax, Tunisia. Sulfate sources impacted sulfide production rates from marine sediments as well as the diversity of SRB species belonging to Deltaproteobacteria. When PG was used as sulfate source, Desulfovibrio species dominated microbial communities of marine sediments, while Desulfobacter species were mainly detected using sodium sulfate. Sulfide production was also affected depending on the electron donor used, with the highest production obtained using formate. In contrast, low sulfide production (acetate-containing cultures was associated with an increase in the population of Firmicutes. These results suggested that marine Desulfovibrio species, to be further isolated, are potential candidates for bioremediation of PG by immobilizing metals and metalloids thanks to sulfide production by these SRB.

  12. The mid-Cretaceous North Atlantic nutrient trap: black shales and OAEs

    NARCIS (Netherlands)

    Trabucho Alexandre, J.; Tuenter, E.; Henstra, G.A.; Zwan, C.J. van der; Wal, R.S.W. van de; Dijkstra, H.A.; Boer, P.L. de

    2010-01-01

    Organic-rich sediments are the salient marine sedimentation product in the mid-Cretaceous of the ocean basins formed in the Mesozoic. Oceanic anoxic events (OAEs) are discrete and particularly organic-rich intervals within these mid-Cretaceous organic-rich sequences and are defined by pronounced

  13. World-wide and regional intercomparison for the determination of trace elements in polluted marine sediment IAEA-356. Report no.56

    Energy Technology Data Exchange (ETDEWEB)

    Horvat, M; Mee, L D; Oregioni, B [International Atomic Energy Agency, Marine Environment Laboratory, Monaco (Monaco)

    1994-09-01

    The accurate and precise determination of trace elements in marine sediment samples is an important aspect of geochemical marine pollution studies and for assessing the levels and pathways of marine pollutants. Past intercomparison exercise conducted by the Marine Environment Laboratory of IAEA (formerly the International Laboratory of Marine Radioactivity) has focused upon the near shore sediment (1) and deep sea marine sediment (2) where trace levels of elements was rather low. The present intercomparison exercise on sediment taken from a polluted coastal lagoon was designed in order to fulfill the increased demand for certified reference materials of various origin and the number of parameters that should be studied. Additionally, different instrumental techniques, both nuclear and non-nuclear, were compared, and evaluated. By statistically examining the data from this study, the material can be certified for future use as a reference material. The current exercise was designed not only to test the intercomparability of different instrumental techniques, but also to evaluate the effectiveness of different procedures for sample digestion. Participants were invited to perform 'total' analyses involving, except in the case of neutron activation analysis, a simple partial extraction with 1M hydrochloric acid (2 hours, room temperature). This partial dissolution had a twofold purpose: (i) to differentiate between instrumental (plus contamination during work-up) errors and those resulting from method-specific (matrix) effects; and (ii) to evaluate a simple screening test for the more labile ('easily leached') fraction of trace elements of particular interest to environmental chemists. The present report presents the entire experimental data set and a statistical evaluation of the results for each parameter.

  14. Marine sediments and Beryllium-10 record of the geomagnetic moment variations during the Brunhes period.

    Science.gov (United States)

    Ménabréaz, Lucie; Thouveny, Nicolas; Bourlès, Didier; Demory, François

    2010-05-01

    Over millennial time scales, the atmospheric production of the cosmonuclid 10Be (half-life 1.387 ± 0.012 Ma [Shmeleff et al., 2009; Korschinek et al., 2009]) is modulated by the geomagnetic field strength, following a negative power law (e.g. Lal, 1988; Masarik and Beer, 2009). With respect to paleomagnetic reconstructions, 10Be-derived paleointensity records can therefore constitute an alternative, global and independent reading of the dipole moment variations. During the last years, efforts have been made to extract a geomagnetic signal from single and stacked 10Be records in natural archives such as ice and marine sediments (e.g. Carcaillet et al., 2004; Christl et al., 2007; Muscheler et al., 2005). In marine sediments, the 10Be concentration results from complex interplay of several processes: cosmogenic production, adsorption on sediment particles, redistribution by fluviatile and oceanic transport, and deposition. Therefore, a correction procedure is required to consider both sediment redistribution and enhanced scavenging, which can alter the primary signatures. To reconstruct the succession of field intensity lows accompanying excursions during the Brunhes chron, we investigated authigenic 10Be/9Be record of marine sequences also studied for paleomagnetism and oxygen isotopes. Mid and low latitude sites were preferred in order to benefit from the most efficient modulation by the magnetospheric shielding. We present a high resolution authigenic 10Be/9Be record of the last 50 ka recovered from the Portuguese Margin, that deciphers the cosmonuclide 10Be overproduction created by the geomagnetic dipole low associated with the Laschamp excursion. This record is compared to other proxy records of the geomagnetic field variations for the same time interval: (1) the relative paleointensity (RPI) reconstructed from the same sediments and the GLOPIS-75 record (Laj et al., 2004), (2) the absolute VDM record based on absolute paleointensities measured on lava flows

  15. Estimation of carbonate concentration and characterization of marine sediments by Fourier transform infrared spectroscopy.

    Digital Repository Service at National Institute of Oceanography (India)

    Veerasingam, S.; Venkatachalapathy, R.

    its saturation horizon is shallower than that calcite [1]. Elements such as Ca2+ and Mg2+, in addition to their substantial contribution to marine sediments, are used biologically in vital cellular processes and in the mineralization of skeletons... such as ocean acidification on ecosystems. Thus, a rapid, cheap and non-destructive tool is required to investigate the distribution of CaCO3 in sediments for the understanding of the fate of biologically produced carbonate. 3    FTIR spectroscopy is one...

  16. Geochemical characterization and miospore biochronostratigraphy of the Frasnian anoxic event in the Parnaiba basin, Northeast Brazil

    International Nuclear Information System (INIS)

    Rodrigues, R.; De Melo, J.H.G.; Alves, D.B.; Loboziak, S.

    1995-01-01

    Radioactive shales of Frasnian age in the Parnaiba Basin present high concentrations of organic matter. They correspond to a condensed section related to the Devonian maximum marine transgression. Combined geochemical, palynological and clay mineral data point out to a dominant algal contribution in the composition of the organic matter, as well as to anoxic depositional settings. This radioactive shale interval corresponds to the onset of a long-lasting, global anoxic event which was to be intensified in the Late Frasnian, and thus can be regarded as a marker for chronostratigraphic correlations. It includes the main source rocks of Devonian age in the Palaeozoic basins of north Brazil, and therefore represents a target of potential interest for hydrocarbon exploration. (authors). 16 refs., 10 figs., 1 tab., 17 photos

  17. Geochemical characterization and miospore biochronostratigraphy of the Frasnian anoxic event in the Parnaiba basin, Northeast Brazil

    Energy Technology Data Exchange (ETDEWEB)

    Rodrigues, R.; De Melo, J.H.G.; Alves, D.B. [Universidade Federal, Rio de Janeiro, RJ (Brazil); Loboziak, S. [Lille-1 Univ., 59 - Villeneuve-d`Ascq (France)

    1995-12-31

    Radioactive shales of Frasnian age in the Parnaiba Basin present high concentrations of organic matter. They correspond to a condensed section related to the Devonian maximum marine transgression. Combined geochemical, palynological and clay mineral data point out to a dominant algal contribution in the composition of the organic matter, as well as to anoxic depositional settings. This radioactive shale interval corresponds to the onset of a long-lasting, global anoxic event which was to be intensified in the Late Frasnian, and thus can be regarded as a marker for chronostratigraphic correlations. It includes the main source rocks of Devonian age in the Palaeozoic basins of north Brazil, and therefore represents a target of potential interest for hydrocarbon exploration. (authors). 16 refs., 10 figs., 1 tab., 17 photos.

  18. Organic geochemistry of the early Toarcian oceanic anoxic event in Hawsker Bottoms, Yorkshire, England

    Science.gov (United States)

    French, K. L.; Sepúlveda, J.; Trabucho-Alexandre, J.; Gröcke, D. R.; Summons, R. E.

    2014-03-01

    A comprehensive organic geochemical investigation of the Hawsker Bottoms outcrop section in Yorkshire, England has provided new insights about environmental conditions leading into and during the Toarcian oceanic anoxic event (T-OAE; ∼183 Ma). Rock-Eval and molecular analyses demonstrate that the section is uniformly within the early oil window. Hydrogen index (HI), organic petrography, polycyclic aromatic hydrocarbon (PAH) distributions, and tricyclic terpane ratios mark a shift to a lower relative abundance of terrigenous organic matter supplied to the sampling locality during the onset of the T-OAE and across a lithological transition. Unlike other ancient intervals of anoxia and extinction, biomarker indices of planktonic community structure do not display major changes or anomalous values. Depositional environment and redox indicators support a shift towards more reducing conditions in the sediment porewaters and the development of a seasonally stratified water column during the T-OAE. In addition to carotenoid biomarkers for green sulfur bacteria (GSB), we report the first occurrence of okenane, a marker of purple sulfur bacteria (PSB), in marine samples younger than ∼1.64 Ga. Based on modern observations, a planktonic source of okenane's precursor, okenone, would require extremely shallow photic zone euxinia (PZE) and a highly restricted depositional environment. However, due to coastal vertical mixing, the lack of planktonic okenone production in modern marine sulfidic environments, and building evidence of okenone production in mat-dwelling Chromatiaceae, we propose a sedimentary source of okenone as an alternative. Lastly, we report the first parallel compound-specific δC13 record in marine- and terrestrial-derived biomarkers across the T-OAE. The δC13 records of short-chain n-alkanes, acyclic isoprenoids, and long-chain n-alkanes all encode negative carbon isotope excursions (CIEs), and together, they support an injection of isotopically light

  19. Genotoxic and teratogenic potential of marine sediment extracts investigated with comet assay and zebrafish test

    International Nuclear Information System (INIS)

    Kammann, Ulrike; Biselli, Scarlett; Huehnerfuss, Heinrich; Reineke, Ninja; Theobald, Norbert; Vobach, Michael; Wosniok, Werner

    2004-01-01

    Organic extracts of marine sediments from the North Sea and the Baltic Sea were investigated with two toxicity assays. The comet assay based on the fish cell line Epithelioma papulosum cyprini (EPC) was applied to determine the genotoxic potential; zebrafish embryos (Danio rerio) were used to quantify the teratogenic potential of the samples. EC 50 values were calculated from dose-response curves for both test systems. Highest teratogenic and genotoxic effects normalised to total organic carbon (TOC) content were detected in sediment samples of different origins. Polychlorinated biphenyls (PCBs) and polycyclic aromatic hydrocarbons (PAHs) are not likely to be the causes of the observed effects, as demonstrated by a two-step fractionation procedure of selected extracts. The toxic potential was more pronounced in fractions having polarity higher than those possessed by PAHs and PCBs. The suitability of the two in vitro test systems for assessing genotoxic and teratogenic effects of marine sediment extracts could be demonstrated. - Capsule: In vitro toxicity assays are used to assess genotoxic and teratogenic effects of environmental extracts

  20. Petroleum hydrocarbons and polycyclic aromatic hydrocarbons (PAHs) in Hong Kong marine sediments

    International Nuclear Information System (INIS)

    Zheng, G.J.; Richardson, B.J.

    1999-01-01

    A total of 20 surficial sediment samples, obtained from Hong Kong coastal waters, were analysed for petroleum hydrocarbons (PHCs) and a suite of 15 polycyclic aromatic hydrocarbons (PAHs). The results indicate that Hong Kong coastal sediments are often seriously polluted with petroleum related hydrocarbons. This is especially so in heavily urbanised or industrialized localities, such as Kowloon Bay (Victoria Harbour), Tsing Yi North and Tolo Harbour. Petroleum hydrocarbon pollutants in marine sediments are believed to be mainly derived from the transportation of oil, shipping activities, spillages, and industrial, stormwater and waste wastewater discharge. The ratio of unresolved complex mixture (UCM) to n-alkanes, carbon preference index (CPI), and n-C 16 values indicate that the main contribution to petroleum hydrocarbon contamination is via oil and its products. Pollutant sources appear to be stable and continuing when compared with previous data. (author)

  1. Succession of Bacterial Communities in a Seasonally Stratified Lake with an Anoxic and Sulfidic Hypolimnion

    Directory of Open Access Journals (Sweden)

    Muhe Diao

    2017-12-01

    Full Text Available Although bacteria play key roles in aquatic food webs and biogeochemical cycles, information on the seasonal succession of bacterial communities in lakes is still far from complete. Here, we report results of an integrative study on the successional trajectories of bacterial communities in a seasonally stratified lake with an anoxic hypolimnion. The bacterial community composition of epilimnion, metalimnion, and hypolimnion diverged during summer stratification and converged when the lake was mixed. In contrast, bacterial communities in the sediment remained relatively stable over the year. Phototrophic Cyanobacteria and heterotrophic Actinobacteria, Alphaproteobacteria and Planktomycetes were abundant in the aerobic epilimnion, Gammaproteobacteria (mainly Chromatiaceae dominated in the metalimnion, and Chlorobi, Betaproteobacteria, Deltaproteobacteria, and Firmicutes were abundant in the anoxic sulfidic hypolimnion. Anoxic but nonsulfidic conditions expanded to the surface layer during fall turnover, when the epilimnion, metalimnion and upper hypolimnion mixed. During this period, phototrophic sulfur bacteria (Chromatiaceae and Chlorobi disappeared, Polynucleobacter (Betaproteobacteria and Methylobacter (Gammaproteobacteria spread out from the former meta- and hypolimnion to the surface layer, and Epsilonproteobacteria dominated in the bottom water layer. Cyanobacteria and Planktomycetes regained dominance in early spring, after the oxygen concentration was restored by winter mixing. In total, these results show large spatio-temporal changes in bacterial community composition, especially during transitions from oxic to anoxic and from sulfidic to nonsulfidic conditions.

  2. Effects of pollution on the geochemical properties of marine sediments across the fringing reef of Aqaba, Red Sea.

    Science.gov (United States)

    Al-Rousan, Saber; Al-Taani, Ahmed A; Rashdan, Maen

    2016-09-15

    The Gulf of Aqaba is of significant strategic and economic value to all gulf-bordering states, particularly to Jordan, where it provides Jordan with its only marine outlet. The Gulf is subject to a variety of impacts posing imminent ecological risk to its unique marine ecosystem. We attempted to investigate the status of metal pollution in the coastal sediments of the Jordanian Gulf of Aqaba. The distribution of Cd, Cr, Zn, Cu, Pb, Al, Fe, and Mn concentrations were determined in trapped and bottom-surface sediments at three selected sites at different depths. In addition, monthly sedimentation rates at varying water depths were also estimated at each sampling site using sediment traps. The high concentrations of Cd, Cr, Zn were recorded at the Phosphate Loading Birth (PLB) site followed by the Industrial Complex (IC) site indicating their dominant anthropogenic source (i.e., the contribution of industrial activities). However, Fe, Al, and Mn contents were related to inputs from the terrigenous (crustal) origin. Except for Al, Fe and Mn at the PLB site, the concentrations of metals exhibited a decreasing trend with increasing water depth (distance from the shoreline). The PLB site also showed the highest sedimentation rate which decreased with increasing water depth. The Enrichment factors (EFs) showed that Cd was the most enriched element in the sediment (indicating that Cd pollution is widespread), whereas the least enriched metal in sediments was Cu. EF values suggested that the coastal area is impacted by a combination of human and natural sources of metals, where the anthropogenic sources are intense in the PLB site (north of Gulf of Aqaba). The MSS area is potentially the least polluted, consistent with being a marine reserve. The IC sediments have been found to be impacted by human activities but less intensely compared to the PLB area. These results suggested that there are two sources of metals in sediments; the primary source is likely closer to PLB

  3. Acclimation of Hydrilla verticillata to sediment anoxia in vegetation restoration in eutrophic waters.

    Science.gov (United States)

    Wu, Juan; Dai, Yanran; Rui, Shengyang; Cui, Naxin; Zhong, Fei; Cheng, Shuiping

    2015-12-01

    Sediment anoxia generally results from intense organic enrichment and is a limiting factor in the restoration of vegetation in eutrophic waters. To investigate the effect of sediment anoxia on a typical pollution-tolerant submerged macrophyte species, Hydrilla verticillata, and acclimation mechanisms in the plant, a gradient of sediment anoxia was simulated with additions of sucrose to the sediment, which can stimulate increased concentrations of total nitrogen, NH4(+) and Fe in pore water. H. verticillata growth was significantly affected by highly anoxic conditions, as indicated by reduced total biomass in the 0.5 and 1% sucrose treatments. However, slight anoxia (0.1% sucrose addition) promoted growth, and the shoot biomass was 22.64% higher than in the control. In addition to morphologic alterations, H. verticillata showed physiological acclimations to anoxia, including increased anaerobic respiration and changes in carbon and nitrogen metabolism in roots. The soluble protein and soluble carbohydrate contents in roots of the 1% treatment were both significantly higher compared with those in the control. The increase in alcohol dehydrogenase activity and pyruvate content in the roots suggested that H. verticillata has a well-developed capacity for anaerobic fermentation. This study suggests that highly anoxic sediments inhibit the growth of H. verticillata and the species has a degree of tolerance to anoxic conditions. Further in situ investigations should be conducted on the interactions between sediment conditions and macrophytes to comprehensively evaluate the roles of sediment in the restoration of vegetation in eutrophic waters.

  4. Shifts in coastal sediment oxygenation cause pronounced changes in microbial community composition and associated metabolism.

    Science.gov (United States)

    Broman, Elias; Sjöstedt, Johanna; Pinhassi, Jarone; Dopson, Mark

    2017-08-09

    A key characteristic of eutrophication in coastal seas is the expansion of hypoxic bottom waters, often referred to as 'dead zones'. One proposed remediation strategy for coastal dead zones in the Baltic Sea is to mix the water column using pump stations, circulating oxygenated water to the sea bottom. Although microbial metabolism in the sediment surface is recognized as key in regulating bulk chemical fluxes, it remains unknown how the microbial community and its metabolic processes are influenced by shifts in oxygen availability. Here, coastal Baltic Sea sediments sampled from oxic and anoxic sites, plus an intermediate area subjected to episodic oxygenation, were experimentally exposed to oxygen shifts. Chemical, 16S rRNA gene, metagenomic, and metatranscriptomic analyses were conducted to investigate changes in chemistry fluxes, microbial community structure, and metabolic functions in the sediment surface. Compared to anoxic controls, oxygenation of anoxic sediment resulted in a proliferation of bacterial populations in the facultative anaerobic genus Sulfurovum that are capable of oxidizing toxic sulfide. Furthermore, the oxygenated sediment had higher amounts of RNA transcripts annotated as sqr, fccB, and dsrA involved in sulfide oxidation. In addition, the importance of cryptic sulfur cycling was highlighted by the oxidative genes listed above as well as dsvA, ttrB, dmsA, and ddhAB that encode reductive processes being identified in anoxic and intermediate sediments turned oxic. In particular, the intermediate site sediments responded differently upon oxygenation compared to the anoxic and oxic site sediments. This included a microbial community composition with more habitat generalists, lower amounts of RNA transcripts attributed to methane oxidation, and a reduced rate of organic matter degradation. These novel data emphasize that genetic expression analyses has the power to identify key molecular mechanisms that regulate microbial community responses

  5. Thermophilic anaerobes in arctic marine sediments induced to mineralize complex organic matter at high temperature

    DEFF Research Database (Denmark)

    Hubert, Casey; Arnosti, Carol; Brüchert, Volker

    2010-01-01

    Marine sediments harbour diverse populations of dormant thermophilic bacterial spores that become active in sediment incubation experiments at much higher than in situ temperature. This response was investigated in the presence of natural complex organic matter in sediments of two Arctic fjords......, as well as with the addition of freeze-dried Spirulina or individual high-molecular-weight polysaccharides. During 50°C incubation experiments, Arctic thermophiles catalysed extensive mineralization of the organic matter via extracellular enzymatic hydrolysis, fermentation and sulfate reduction. This high...... reactivity determined the extent of the thermophilic response. Fjord sediments with higher in situ SRR also supported higher SRR at 50°C. Amendment with Spirulina significantly increased volatile fatty acids production and SRR relative to unamended sediment in 50°C incubations. Spirulina amendment also...

  6. Association of marine archaea with the digestive tracts of two marine fish species

    NARCIS (Netherlands)

    Maarel, Marc J.E.C. van der; Artz, Rebekka R.E.; Haanstra, Rene; Forney, Larry J.

    Recent studies have shown that archaea which were always thought to live under strict anoxic or extreme environmental conditions are also present in cold, oxygenated seawater, soils, the digestive tract of a holothurian deep-sea-deposit feeder, and a marine sponge, In this study we show, by using

  7. Investigating Deep-Marine Sediment Waves in the Northern Gulf of Mexico Using 3D Seismic Data

    Science.gov (United States)

    Wang, Z.; Gani, M. R.

    2016-12-01

    Deep-water depositional elements have been studied for decades using outcrop, flume tank, sidescan sonar, and seismic data. Even though they have been well recognized by researchers, the improvements in the quality of 3D seismic data with increasingly larger dimension allow detailed analysis of deep-water depositional elements with new insights. This study focuses on the deep-marine sediment waves in the northern Gulf of Mexico. By interpreting a 3D seismic dataset covering 635 km2 at Mississippi Canyon and Viosca Knoll areas, large sediment waves, generated by sediment gravity flows, were mapped and analyzed with various seismic attributes. A succession of sediment waves, approximately 100 m in thickness, is observed on the marine slope that tapers out at the toe of the slope. The individual sediment wave exhibits up to 500 m in wavelength and up to 20 m in height. The wave crests oriented northeast-southwest are broadly aligned parallel to the regional slope-strike, indicating their sediment gravity flow origin. The crestlines are straight or slightly sinuous, with sinuosity increasing downslope. Their anti-dune patterns likely imply the presence of supercritical flows. The sediment waves have a retrogradational stacking pattern. Seismic amplitude maps of each sediment wave revealed that after depositing the majority of sheet-like sands on the upper slope, sediment gravity flows started to form large sediment waves on the lower slope. The steep and narrow upcurrent flanks of the sediment waves always display higher amplitudes than the gentle and wide downcurrent flanks, indicating that the sands were likely preferentially trapped along the upcurrent flanks, whereas the muds spread along the downcurrent flanks. The formation of sediment waves likely requires a moderate sand-mud ratio, as suggested by these observations: (1) absence of sediment waves on the upper slope where the sands were mainly deposited as unconfined sheets with a high sand-mud ratio; (2

  8. Speciation and Distribution of Trace Metals and Organic Matter in Marine Lake as In Situ Laboratory

    Science.gov (United States)

    Mlakar, M.; Fiket, Ž.; Cuculić, V.; Cukrov, N.; Geček, S.

    2016-02-01

    Marine lakes are unique, isolated marine systems, also recognized as in situ "laboratories" in which geochemical processes on a different scale compared to the open sea, can be observed. Impact of organic matter cycling on distribution of trace metals in the marine lake Mir, located on Dugi Otok Island, in the central part of the eastern Adriatic Sea, was investigated. Intense spatial and seasonal variations of physico-chemical parameters and organic matter concentrations in the water column of the Lake are governed predominantly by natural processes. Enhanced oxygen consumption in the Lake during summer season, high organic carbon concentrations and low redox potential result in occasional occurrence of anoxic conditions in the bottom layers. Speciation modelling showed that dissolved trace metals Cu, Pb and Zn, are mostly bound to organic matter, while Cd, Co and Ni are present predominantly as free ions and inorganic complexes. Trace metals removal from the water column and their retention in the sediment was found to depend on the nature of the relationship between specific metal and high proportion of organic matter (up to 9%) and inorganic phases, Fe-oxyhydroxydes or biogenic calcite. Surrounding karstic background, with occasional occurrences of red soil characterize deposited sediments as coarse grained and carbonate rich, whose elemental composition is affected by bathymetry of the basin and overall biological production.

  9. Assessment of 210Po in agricultural soils and marine sediments of the Atlantic and Pacific oceans of Guatemala

    International Nuclear Information System (INIS)

    Garcia Vela, A.G.

    1999-01-01

    A radiochemical method consisting of 210 Polonium extraction was made to measure radioactivity in samples of soil and marine sediments of Atlantic and Pacific Ocean. The solution of polonium it was treated to obtain the deposition of the metal over a zinc disc and was measured by alpha espectrometry system based on Planar Ion Planted Silice (PIPS) system. The concern about cultivated soils its consuption products from sea and soil come from these sources. The results shows that activity of 210 Polonium in agricultural soils and marine sediments are below of ALI recommended by international standards

  10. Tracing Carbon Cycling in the Atmosphere and Oceans During the Cretaceous Ocean Anoxic Event 2 (OAE2, 94Ma)

    Science.gov (United States)

    Moran, S. A. M.; Boudinot, F. G.; Dildar, N.; Sepúlveda, J.

    2017-12-01

    We present a high-resolution record of compound-specific stable carbon isotope data from short-chain—aquatic algae—and long-chain n-alkanes—terrestrial plants—preserved in sedimentary sequences from the Smokey Hollow #1 (SH1) core in the Grand Staircase Escalante National Monument in southern Utah. The study area covered by SH1 core was situated at the western margin of the Western Interior Seaway during the Cretaceous Ocean Anoxic Event (OAE2, 94Ma.), and was characterized by high sedimentation rates and enhanced preservation of both marine and terrestrial organic matter. Short- and long-chain n-alkanes were isolated and purified from branched and cyclic aliphatic hydrocarbons using an optimized urea adduction protocol, and δ13Cn-alkane was measured using a Thermo MAT253 GC-C-IR-MS. We use the δ13Cn-alkane from aquatic and terrestrial sources to better understand carbon cycle interactions in the oceanic and atmospheric carbon pools across this event. Our results indicate that the δ13C of terrestrial plants experienced a faster and more pronounced positive carbon isotope excursion compared to marine sources. We will discuss how these results can inform models of carbon cycle interactions between the ocean and the atmosphere during greenhouse climates, and how they can be used to trace possible sources of CO2.

  11. Geochemical influences on assimilation of sediment-bound metals in clams and mussels

    Science.gov (United States)

    Griscom, S.B.; Fisher, N.S.; Luoma, S.N.

    2000-01-01

    A series of experiments was performed to evaluate the extent to which Cd, Co, Ag, Se, Cr, and Zn bound to sediments with different geochemical properties could be assimilated by the mussel Mytilus edulis and the clam Macoma balthica. Oxidized and reduced radiolabeled sediments were fed to suspension-feeding animals, the depuration patterns of the individuals were followed by ??-spectrometry, and the assimilation efficiencies (AEs) of ingested metals were determined. AEs from geochemically diverse sediments typically varied less than 2-fold and ranged from 1% for Cr to 42% for Zn. Metals were assimilated from anoxic sediment by both animals; Ag, Cd, and Co AEs in M. balthica were 9-16%, 2-fold lower than from oxic sediment, but in M. edulis AEs were about two times greater from anoxic sediment for all metals but Ag. For oxic sediment, Cd and Co AEs in M. edulis decreased 3-4-fold with increased sediment exposure time to the metals with smaller but significant effects also noted for Zn and Se but not Ag. A less pronounced decrease in AE for M. balthica was evident only after 6 months exposure time. Sequential extractions of the oxidized sediments showed a transfer of metals into more resistant sediment components over time, but the rate did not correlate with a decrease in metal AEs. Comparing the two bivalves, TOC concentrations had an inconsistent effect on metal AEs. AEs of metals from bacteria-coated glass beads were slightly higher than from humic acid-coated beads, which were comparable with whole-sediment AEs. There was correspondence of AE with desorption of Ag, Cd, Co, and Se (but not Zn) from sediments into pH 5 seawater, measured to simulate the gut pH of these bivalves. The results imply that metals associated with sulfides and anoxic sediments are bioavailable, that the bioavailability of metals from sediments decreases over exposure time, that organic carbon content generally has a small effect on AEs, and that AEs of sediment-bound metals differ among

  12. Biogeochemical controls on the oxygen, nitrogen and sulfur distributions in the water column of Golfo Dulce: an anoxic basin on the Pacific coast of Costa Rica revisited

    International Nuclear Information System (INIS)

    Ferdelman, Timothy G.; Thamdrup, Bo; Canfield, Donald E.; Noehr Glud, Ronnie; Kuever, Jan; Lillebaek, Rolf; Birger Ramsing, Niels; Wawer, Cathrin

    2006-01-01

    Chemical distributions, respiration rates, and bacterial distributions were measured in 1994 in the water column and sediments of a small, tropical, anoxic basin (Golfo Dulce, Pacific coast of Costa Rica) to examine the biogeochemical controls on anoxia, sulfide, dissolved inorganic nitrogen, and organic carbon consumption. As reported previously, the deepest 100 m of the water column were anoxic, and sulfide concentrations in the bottom waters were less than 7 μM and then only transiently. Both free-swimming sulfide-oxidizing bacteria and Beggiatoa sp. (containing large vacuoles) were observed in the anoxic bottom waters or at the sediment-water interface. Aerobic respiration dominated the decomposition of organic matter in the surface waters and pycnocline, whereas sulfate reduction was principally restricted to the sediments. Bacteria were distributed in discrete zones and exhibited the highest densities where oxygen decreased below 1 μM around 100 m depth, and near the sediment-water interface. The sub-oxic, sub-pycnocline water column was characterized by a dissolved inorganic nitrogen (DIN) deficit of 2.9 mole m -2 . With a water residence time of 35 - 57 d, estimated from a salt balance, this deficit corresponded to a DIN loss of 51 - 85 mmol m -2 d -1 , comparable to the sub-pycnocline oxygen consumption. Sulfide in the water column was maintained at low concentrations by frequent inputs of oxygenated water from the Pacific Ocean. Sulfide production in the sediments due to bacterial sulfate reduction was scavenged by frequent deposition of iron-rich turbidites. Based on 210 Pb distributions, the most recent emplacement of a turbidite in the basin sediments was determined to have occurred between 1989 and 1992. (author) [es

  13. Comparative study of plutonium and americium bioaccumulation from two marine sediments contaminated in the natural environment

    International Nuclear Information System (INIS)

    Hamilton, T.F.; Smith, J.D.

    1991-01-01

    Plutonium and americium sediment-animal transfer was studied under controlled laboratory conditions by exposure of the benthic polychaete Nereis diversicolor (O. F. Mueller) to marine sediments contaminated by a nuclear bomb accident (near Thule, Greenland) and nuclear weapons testing (Enewetak Atoll). In both sediment regimes, the bioavailability of plutonium and 241 Am was low, with specific activity in the tissues 241 Am occurred and 241 Am uptake from the Thule sediment was enhanced compared to that from lagoon sediments of Enewetak Atoll. Autoradiography studies indicated the presence of hot particles of plutonium in the sediments. The results highlight the importance of purging animals of their gut contents in order to obtain accurate estimates of transuranic transfer from ingested sediments into tissue. It is further suggested that enhanced transuranic uptake by some benthic species could arise from ingestion of highly activity particles and organic-rich detritus present in the sediments. (author)

  14. Marine and terrigenous lipids in southeast atlantic sediments (leg 175) as paleoenvironmental indicators: initial results

    NARCIS (Netherlands)

    Sinninghe Damsté, J.S.; Schefuss, E.; Versteegh, G.J.M.; Jansen, J.H.F.

    2001-01-01

    Lipid compositions of sediments recovered during Ocean Drilling Program Leg 175 in the eastern South Atlantic reflect a variety of oceanographic and climatological environments. Most of the identified lipids can be ascribed to marine sources, notably haptophytes,

  15. Sediment Ksub(d)s and concentration factors for radionuclides in the marine environment

    International Nuclear Information System (INIS)

    1985-01-01

    Both the biological and geochemical processes, which are dependent on the chemical form of the element in question, and the radioactive decay of the nuclide are important parameters in the models used for the calculation of dumping limits for radioactive wastes disposed of in the deep sea. The geochemical processes were not adequately represented in earlier models and only rough approximations of parameters were used in the calculations. This report provides an approach for the calculation of deep-sea sediment distribution coefficients and coastal sediment concentration factors for radionuclides in marine biological materials based, whenever possible, on field data

  16. Contamination of port zone sediments by metals from Large Marine Ecosystems of Brazil.

    Science.gov (United States)

    Buruaem, Lucas M; Hortellani, Marcos A; Sarkis, Jorge E; Costa-Lotufo, Leticia V; Abessa, Denis M S

    2012-03-01

    Sediment contamination by metals poses risks to coastal ecosystems and is considered to be problematic to dredging operations. In Brazil, there are differences in sedimentology along the Large Marine Ecosystems in relation to the metal distributions. We aimed to assess the extent of Al, Fe, Hg, Cd, Cr, Cu, Ni, Pb and Zn contamination in sediments from port zones in northeast (Mucuripe and Pecém) and southeast (Santos) Brazil through geochemical analyses and sediment quality ratings. The metal concentrations found in these port zones were higher than those observed in the continental shelf or the background values in both regions. In the northeast, metals were associated with carbonate, while in Santos, they were associated with mud. Geochemical analyses showed enrichments in Hg, Cd, Cu, Ni and Zn, and a simple application of international sediment quality guidelines failed to predict their impacts, whereas the use of site-specific values that were derived by geochemical and ecotoxicological approaches seemed to be more appropriate in the management of the dredged sediments. Copyright © 2012 Elsevier Ltd. All rights reserved.

  17. The Deposition and Accumulation of Microplastics in Marine Sediments and Bottom Water from the Irish Continental Shelf.

    Science.gov (United States)

    Martin, Jake; Lusher, Amy; Thompson, Richard C; Morley, Audrey

    2017-09-07

    Microplastics are widely dispersed throughout the marine environment. An understanding of the distribution and accumulation of this form of pollution is crucial for gauging environmental risk. Presented here is the first record of plastic contamination, in the 5 mm-250 μm size range, of Irish continental shelf sediments. Sixty-two microplastics were recovered from 10 of 11 stations using box cores. 97% of recovered microplastics were found to reside shallower than 2.5 cm sediment depth, with the area of highest microplastic concentration being the water-sediment interface and top 0.5 cm of sediments (66%). Microplastics were not found deeper than 3.5 ± 0.5 cm. These findings demonstrate that microplastic contamination is ubiquitous within superficial sediments and bottom water along the western Irish continental shelf. Results highlight that cores need to be at least 4-5 cm deep to quantify the standing stock of microplastics within marine sediments. All recovered microplastics were classified as secondary microplastics as they appear to be remnants of larger items; fibres being the principal form of microplastic pollution (85%), followed by broken fragments (15%). The range of polymer types, colours and physical forms recovered suggests a variety of sources. Further research is needed to understand the mechanisms influencing microplastic transport, deposition, resuspension and subsequent interactions with biota.

  18. OAE2 in marine sections at high northern palaeolatitudes?

    DEFF Research Database (Denmark)

    Lenniger, Marc; Pedersen, Gunver Krarup; Bjerrum, Christian J.

    oceanic anoxic events is the Cenomanian–Turonian boundary event (OAE2). The event is characterised by a major positive d13C excursion (ca. 2-4 ‰) in marine carbonate and both marine and terrestrial organic matter, which indicates that a major disturbance of the global carbon cycle occurred in the ocean...

  19. Assessment of Marine Pollution in İzmir Bay: Heavy Metal and Organic Compound Concentrations in Surficial Sediments

    OpenAIRE

    AKSU, Ali Engin

    2014-01-01

    The extent of marine pollution in İzmir Bay is investigated using inorganic and organic geochemical data from surface sediments. The concentrations of 42 elements in 84 samples established that surface sediments in Inner İzmir Bay display significant enrichments in Ag, As, Cd, Cr, Cu, Hg, Mo, P, Pb, Sb, Sn, V, and Zn, associated with notably high concentrations of total organic carbon and sulphur. Organic geochemical data in 14 samples from Inner İzmir Bay showed that these sediments...

  20. Energetic Constraints on H-2-Dependent Terminal Electron Accepting Processes in Anoxic Environments

    DEFF Research Database (Denmark)

    Heimann, Axel Colin; Jakobsen, Rasmus; Blodau, C.

    2010-01-01

    and sulfate reduction are under direct thermodynamic control in soils and sediments and generally approach theoretical minimum energy thresholds. If H-2 concentrations are lowered by thermodynamically more potent TEAPs, these processes are inhibited. This principle is also valid for TEAPS providing more free......Microbially mediated terminal electron accepting processes (TEAPs) to a large extent control the fate of redox reactive elements and associated reactions in anoxic soils, sediments, and aquifers. This review focuses on thermodynamic controls and regulation of H-2-dependent TEAPs, case studies...... illustrating this concept and the quantitative description of thermodynamic controls in modeling. Other electron transfer processes are considered where appropriate. The work reviewed shows that thermodynamics and microbial kinetics are connected near thermodynamic equilibrium. Free energy thresholds...

  1. The accumulation of radiocesium in coarse marine sediment: Effects of mineralogy and organic matter

    International Nuclear Information System (INIS)

    Kim, Yeongkyoo; Kim, Kangjoo; Kang, Hee-Dong; Kim, Wan; Doh, Si-Hong; Kim, Do-Sung; Kim, Byoung-Ki

    2007-01-01

    The controlling factors affecting the accumulation of 137 Cs in marine sediment have not been investigated in detail, especially in coarse grained sediment. Eighty eight coarse marine sediment samples near Wuljin, Korea, were characterized by quantitative X-ray-diffraction (XRD), gamma-ray, and total organic carbon (TOC) analysis. Those factors were then compared. The grain size was in the range of -0.48 to 3.6 Mdφ corresponding to sand grains. TOC content was in the range of 0.06-1.75%, and the concentration of 137 Cs was 137 Cs activity, which was first reported here, probably due to the weathered frayed edge site of biotite produced by a release of K. The samples with low TOC contents showed even better correlation between biotite content and 137 Cs activity. For the entire samples, however, the TOC content showed better correlation with 137 Cs activity than other single factors, indicating that biotite and organic carbon are the most important factors controlling 137 Cs fixation. The combined effect of biotite and TOC for 137 Cs fixation was also confirmed by multiple regression analysis ( 137 Cs activity = 1.712 . TOC (wt%) + 0.202 . biotite (wt%) - 0.097; R 2 = 0.819). The regressed slopes indicated that the 137 Cs-adsorption capacity of TOC was about 8.5 times higher than that of biotite. However, the amount of 137 Cs adsorbed onto biotite was 30% more than that adsorbed onto TOC due to much greater biotite content in the sediment. The role of biotite in fixing 137 Cs becomes more important in sediment with coarser grains, containing little TOC

  2. Synopsis of French experimental and in situ research on the terrestrial and marine behavior of Tc

    International Nuclear Information System (INIS)

    Masson, M.; Patti, F.; Colle, C.; Roucoux, P.; Grauby, A.; Saas, A.

    1989-01-01

    Terrestrial environment studies have been essentially concerned with the evolution of soil deposition and soil-plant transfers. Experimentally determined coefficients of distribution in soils are low: 60-80% of Tc remains hydrosoluble during the first months. Technetium emissions resulting from microbiological activity have been quantified. Antagonistic effects on Mo and Tc retention by soils are dependent on their respective concentrations. Four areas of soil-plant transfers have been studied: (1) root absorption kinetics relative to deposition of Tc, (2) interaction of stable Mo (environmental parameter) with the transfer of Tc to plants, (3) interaction of some long-lived radioisotopes (effluent parameters) with the transfer of Tc to plants, and (4) long-term soil-plant transfer and aging of deposited material. Of aquatic systems, only the marine environment has been studied. Under anoxic conditions in the presence of reducing sediments, the distribution coefficients (Kd) were very high (10(3)). Concentration factors (CF) from water to organisms were generally very low (1 to 10); however, CF greater than 1000 have been observed for some biota such as macrophytic brown algae, worms and lobsters. Biochemical analysis showed that Tc was essentially free and partially bonded to proteins. The transfer factors between sediments and species were very low (TF less than 0.5). The biological half-time was determined in some marine organisms that had accumulated Tc from water, food or sediments; the loss is biphasic. Uptake in edible parts was low. The physiochemical form affects the accumulation and loss of Tc. Analyses have quantified 99Tc in marine fauna and biota in the English Channel in relation with releases of the reprocessing plant of La Hague. Brown algae are the best bioindicators for following 99Tc dispersion in marine ecosystems. 24 references

  3. Polycyclic aromatic hydrocarbons (PAHs) in continental shelf sediment of China: Implications for anthropogenic influences on coastal marine environment

    International Nuclear Information System (INIS)

    Liu Liangying; Wang Jizhong; Wei Gaoling; Guan Yufeng; Zeng, Eddy Y.

    2012-01-01

    Sediments collected from the continental shelf of China, embracing Yellow Sea, inner shelf of the East China Sea (ECS), and the South China Sea (SCS), were analyzed for polycyclic aromatic hydrocarbons (PAHs). The concentrations of anthropogenic PAHs (Σ 18 PAH) were 27–224 ng/g dry weight, with an average of 82 ng/g. Sedimentary PAHs in the continental shelf off China were mainly derived from mixed residues of biomass, coal, and petroleum combustion. Fluvial transport and atmospheric deposition mainly accounted for sediment PAHs in the ECS inner shelf and Yellow Sea (and the SCS), respectively. Furthermore, statistically higher levels of Σ 18 PAH (28–224 ng/g; mean 110 ng/g) in the Yellow Sea sediment than in the SCS sediment (28–109 ng/g; mean 58 ng/g) were probably resulted from higher PAH emissions from coke industry and domestic coal combustion in North China than in South China. - Highlights: ► Coal and biomass combustion was the main origin of PAHs in coastal marine sediment of China. ► Fluvial transport was the main mode for transporting PAHs to the East China Sea inner shelf. ► Atmospheric deposition largely accounted for sediment PAHs in Yellow Sea and the South China Sea. ► Regional energy use pattern in China was responsible for the spatial distribution of PAHs in coastal marine sediment. - Sources, compositions and spatial distributions of PAHs in continental shelf sediments off China are analyzed to estimate anthropogenic influences.

  4. Transfer parameters of radionuclides in the marine environment

    International Nuclear Information System (INIS)

    1996-03-01

    To increase the accuracy of estimation of exposure dose by radionuclides in the marine, the informations of environmental parameter data in the marine were collected, arranged and discussed. The informations were discussed by 'a sectional committee of marine suspended solids and sediment'. The following problems were investigated and the studies were recorded in this report, clear explanation about the distribution factor (kd), the estimation method of kd, the fluctuating factor of kd data (properties of suspension and sediment, differences among the experimental methods), the physical and chemical behavior of radionuclides, sediment of radionuclides by means of sorption to the suspended particles in the marine, sorption of radionuclides into the marine soil (sediment), re-eluent of radionuclides sorpted in the marine soil (sediment), and relation between marine organism and marine suspended materials and sediment. (S.Y.)

  5. Geochemical peculiarities of marine sediment in coastal areas of India

    International Nuclear Information System (INIS)

    Gothankar, S.S.; Jha, S.K.; Tripathi, R.M.

    2014-01-01

    To understand the impact of anthropogenic activity on coastal marine environment, sediment samples were collected covering the west and east coast of India. The elemental concentration was determined using EDXRF technique. The east coast showed lower Rb/Sr ratio reflecting higher fraction of biogenic deposits, the higher ratio at the west coast reflects higher fraction of terrigenous detritus. The concentration of Pb and Ni was found higher at Rameshwaram and Okha respectively. The result indicates the impact of land based source of pollutant in few locations due to the anthropogenic activities. (author)

  6. Oxygen intrusion into anoxic fjords leads to increased methylmercury availability

    Science.gov (United States)

    Veiteberg Braaten, Hans Fredrik; Pakhomova, Svetlana; Yakushev, Evgeniy

    2013-04-01

    Mercury (Hg) appears in the oxic surface waters of the oceans at low levels (sub ng/L). Because inorganic Hg can be methylated into the toxic and bioaccumulative specie methylmercury (MeHg) levels can be high at the top of the marine food chain. Even though marine sea food is considered the main risk driver for MeHg exposure to people most research up to date has focused on Hg methylation processes in freshwater systems. This study identifies the mechanisms driving formation of MeHg during oxygen depletion in fjords, and shows how MeHg is made available in the surface water during oxygen intrusion. Studies of the biogeochemical structure in the water column of the Norwegian fjord Hunnbunn were performed in 2009, 2011 and 2012. In autumn of 2011 mixing flushing events were observed and lead to both positive and negative effects on the ecosystem state in the fjord. The oxygenated water intrusions lead to a decrease of the deep layer concentrations of hydrogen sulfide (H2S), ammonia and phosphate. On the other hand the intrusion also raised the H2S boundary from 8 m to a shallower depth of just 4 m. Following the intrusion was also observed an increase at shallower depths of nutrients combined with a decrease of pH. Before flushing events were observed concentrations of total Hg (TotHg) increased from 1.3 - 1.7 ng/L in the surface layer of the fjord to concentrations ranging from 5.2 ng/L to 6.4 ng/L in the anoxic zone. MeHg increased regularly from 0.04 ng/L in the surface water to a maximum concentration of 5.2 ng/L in the deeper layers. This corresponds to an amount of TotHg present as MeHg ranging from 2.1 % to 99 %. The higher concentrations of MeHg in the deeper layer corresponds to an area where no oxygen is present and concentrations of H2S exceeds 500 µM, suggesting a production of MeHg in the anoxic area as a result of sulphate reducing bacteria activity. After flushing the concentrations of TotHg showed a similar pattern ranging from 0.6 ng/L in the

  7. The marine ecosystems of the South Pacific coast of Costa Rica: state of knowledge and management perspectives

    International Nuclear Information System (INIS)

    Quesada Alpizar, Marco A.; Cortes, Jorge

    2006-01-01

    A review of the existing scientific literature on marine ecosystems in the South Pacific of Costa Rica is presented. Most of the information generated to date concentrates on the Golfo Dulce area, a tropical fiord and only anoxic basin in the American pacific coast. Even thought there is a considerable amount of information available, there are still many aspects of the marine ecosystems of the region that remain unstudied. Among these, those concerning circulation patterns, mangrove dynamics, biodiversity of soft sediments and deep waters, and the ecology of commercially important species of mollusks, crustaceans and fish, stand out. Special attention should be placed on the study of Golfo Dulce, Isla del Cano and the Terraba-Sierpe mangrove system, give their biological importance and unique regional character. Coastal management in the region should be based on the best scientific information available integrating biological, social and economic criteria; and seeking the improvement of inter-institutional coordination in order to achieve integrative solutions to the existing threats to marine resources. (author) [es

  8. Exploring Actinobacteria assemblages in coastal marine sediments under contrasted Human influences in the West Istria Sea, Croatia.

    Science.gov (United States)

    Duran, Robert; Bielen, Ana; Paradžik, Tina; Gassie, Claire; Pustijanac, Emina; Cagnon, Christine; Hamer, Bojan; Vujaklija, Dušica

    2015-10-01

    The exploration of marine Actinobacteria has as major challenge to answer basic questions of microbial ecology that, in turn, will provide useful information to exploit Actinobacteria metabolisms in biotechnological processes. The ecological functions performed by Actinobacteria in marine sediments are still unclear and belongs to the most burning basic questions. The comparison of Actinobacteria communities inhabiting marine sediments that are under the influence of different contamination types will provide valuable information in the adaptation capacities of Actinobacteria to colonize specific ecological niche. In the present study, the characterization of different Actinobacteria assemblages according to contamination type revealed the ecological importance of Actinobacteria for maintaining both general biogeochemical functions through a "core" Actinobacteria community and specific roles associated with the presence of contaminants. Indeed, the results allowed to distinguish Actinobacteria genera and species operational taxonomic units (OTUs) able to cope with the presence of either (i) As, (ii) metals Ni, Fe, V, Cr, and Mn, or (iii) polycyclic aromatic hydrocarbons (PAHs) and toxic metals (Hg, Cd, Cu, Pb, and Zn). Such observations highlighted the metabolic capacities of Actinobacteria and their potential that should be taken into consideration and advantage during the implementation of bioremediation processes in marine ecosystems.

  9. Biological phosphorus uptake under anoxic and aerobic conditions

    DEFF Research Database (Denmark)

    Kerrn-Jespersen, Jens Peter; Henze, Mogens

    1993-01-01

    Biological phosphorus removal was investigated under anoxic and aerobic conditions. Tests were made to establish whether phosphorus accumulating bacteria can take up phosphate under anoxic conditions and thus utilise nitrate as oxidant. Furthermore, it was tested how the amount of organic matter...... as oxidant. The phosphorus uptake was more rapid under aerobic conditions than under anoxic conditions. The explanation of this is that all phosphorus accumulating bacteria take up phosphate under aerobic conditions, whereas only part of the phosphorus accumulating bacteria take up phosphate under anoxic...

  10. Testing the Role of Microbial Ecology, Redox-Mediated Deep Water Production and Hypersalinity on TEX86: Lipids and 16s Sequences from Archaea and Bacteria in the Water Column and Sediments of Orca Basin

    Science.gov (United States)

    Warren, C.; Romero, I.; Ellis, G.; Goddard, E.; Krishnan, S.; Nigro, L. M.; Super, J. R.; Zhang, Y.; Zhuang, G.; Hollander, D. J.; Pagani, M.

    2014-12-01

    Mesophilic marine archaea and bacteria are known to substantially contribute to the oceanic microbial biomass and play critical roles in global carbon, nitrogen and nutrient cycles. The Orca Basin, a 2400 meter deep bathymetric depression on the continental slope of the north-central Gulf of Mexico, is an ideal environment to examine how redox-dependent biochemical processes control the input and cycling of bacterial and archaea-derived lipid compounds from formation in near-surface water, through secondary recycling processes operating at the redox-transition in the water column, to sedimentary diagenetic processes operating in oxic to anoxic zones within the basin. The lowermost 180 meters of the Orca Basin is characterized by an anoxic, hypersaline brine that is separated from the overlying oxic seawater by a well-defined redox sequence associated with a systematic increasing in salinity from 35 - 250‰. While surface water conditions are viewed as normal marine with a seasonally productive water column, the sub-oxic to anoxic transition zones within the deep-water column and the sediment spans over 200 m allowing the unique opportunity for discrete sampling of resident organisms and lipids. Here we present 16s rRNA sequence data of Bacteria and Archaea collected parallel to GDGT lipid profiles and in situ environmental measurements from the sediment and overlying water column in the intermediate zone of the basin, where movements of chemical transition zones are preserved. We evaluated GDGTs and corresponding taxa across the surface water, chlorophyll maximum, thermocline, and the deep redox boundary, including oxygenation, denitrification, manganese, iron and sulfate reduction zones, to determine if GDGTs are being produced under these conditions and how surface-derived GDGT lipids and the TEX86 signal may be altered. The results have implications for the application of the TEX86 paleotemperature proxy.

  11. Impacts of human activities on distribution of sulfate-reducing prokaryotes and antibiotic resistance genes in marine coastal sediments of Hong Kong.

    Science.gov (United States)

    Guo, Feng; Li, Bing; Yang, Ying; Deng, Yu; Qiu, Jian-Wen; Li, Xiangdong; Leung, Kenneth My; Zhang, Tong

    2016-09-01

    Sulfate-reducing prokaryotes (SRPs) and antibiotic resistance genes (ARGs) in sediments could be biomarkers for evaluating the environmental impacts of human activities, although factors governing their distribution are not clear yet. By using metagenomic approach, this study investigated the distributions of SRPs and ARGs in marine sediments collected from 12 different coastal locations of Hong Kong, which exhibited different pollution levels and were classified into two groups based on sediment parameters. Our results showed that relative abundances of major SRP genera to total prokaryotes were consistently lower in the more seriously polluted sediments (P-value human impacts. Moreover, a unimodel distribution pattern for SRPs along with the pollution gradient was observed. Although total ARGs were enriched in sediments from the polluted sites, distribution of single major ARG types could be explained neither by individual sediment parameters nor by corresponding concentration of antibiotics. It supports the hypothesis that the persistence of ARGs in sediments may not need the selection of antibiotics. In summary, our study provided important hints of the niche differentiation of SRPs and behavior of ARGs in marine coastal sediment. © FEMS 2016. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  12. Comparative study of plutonium and americium bioaccumulation from two marine sediments contaminated in the natural environment

    Energy Technology Data Exchange (ETDEWEB)

    Hamilton, T.F.; Smith, J.D. (Melbourne Univ., Parkville (Australia). Dept. of Inorganic Chemistry); Fowler, S.W.; LaRosa, J.; Holm, E. (International Atomic Energy Agency, Monaco-Ville (Monaco). Lab. of Marine Radioactivity); Aarkrog, A.; Dahlgaard, H. (Risoe National Lab., Roskilde (Denmark))

    1991-01-01

    Plutonium and americium sediment-animal transfer was studied under controlled laboratory conditions by exposure of the benthic polychaete Nereis diversicolor (O. F. Mueller) to marine sediments contaminated by a nuclear bomb accident (near Thule, Greenland) and nuclear weapons testing (Enewetak Atoll). In both sediment regimes, the bioavailability of plutonium and {sup 241}Am was low, with specific activity in the tissues <1% (dry wt) than in the sediments. Over the first three months, a slight preference in transfer of plutonium over {sup 241}Am occurred and {sup 241}Am uptake from the Thule sediment was enhanced compared to that from lagoon sediments of Enewetak Atoll. Autoradiography studies indicated the presence of hot particles of plutonium in the sediments. The results highlight the importance of purging animals of their gut contents in order to obtain accurate estimates of transuranic transfer from ingested sediments into tissue. It is further suggested that enhanced transuranic uptake by some benthic species could arise from ingestion of highly activity particles and organic-rich detritus present in the sediments. (author).

  13. Radioanalytical studies of anthropogenic radionuclides in an anoxic fjord

    International Nuclear Information System (INIS)

    Roos, P.; Holm, E.

    1993-01-01

    The vertical distribution of 239+240 Pu, 238 Pu, 241 Am, 99 Tc, 137 Cs and 134 Cs has been studied in the permanently super-anoxic Framvaren fjord in southern Norway. The adjacent Helvik fjord (slightly below 14 m depth) was studied with the respect to the same radionuclides as a comparison for their distribution and levels during more normal conditions. Th was studied in both fjords as a representative for actinides in oxidation state +4. Vertical distribution of Pu, Am and Th in Framvaren all show increased concentration with depth. Complex formation with DOC is believed to be the main course for this behaviour. Increasing 232 Th with depth in sediment indicate possible remobilization of this element from the sediments. The limited water exchange between the two fjords is illustrated by the low 238 Pu/ 239+240 Pu ratio and the higher 134 Cs/ 137 Cs ratio in Framvaren fjord. Concentration of 99 Tc in Framvaren is also lower than compared to Helvik fjord. Concentration of 99 Tc in Helvik and Framvaren fjord is approximately constant with depth

  14. Effects of the antibiotic ciprofloxacin on the bacterial community structure and degradation of pyrene in marine sediment

    International Nuclear Information System (INIS)

    Naeslund, Johan; Hedman, Jenny E.; Agestrand, Cecilia

    2008-01-01

    The ecological consequences of antibiotics in the aquatic environment have been an issue of concern over the past years due to the potential risk for negative effects on indigenous microorganisms. Microorganisms provide important ecosystem services, such as nutrient recycling, organic matter mineralization and degradation of pollutants. In this study, effects of exposure to the antibiotic ciprofloxacin on the bacterial diversity and pollutant degradation in natural marine sediments were studied using molecular methods (T-RFLP) in combination with radiorespirometry. In a microcosm experiment, sediment spiked with 14 C-labelled pyrene was exposed to five concentrations of ciprofloxacin (0, 20, 200, 1000 and 2000 μg L -1 ) in a single dose to the overlying water. The production of 14 CO 2 (i.e. complete mineralization of pyrene) was measured during 11 weeks. Sediment samples for bacterial community structure analysis were taken after 7 weeks. Results showed a significant dose-dependent inhibition of pyrene mineralization measured as the total 14 CO 2 production. The nominal EC 50 was calculated to 560 μg L -1 , corresponding to 0.4 μg/kg d.w. sediment. The lowest effect concentration on the bacterial community structure was 200 μg L -1 , which corresponds to 0.1 μg/kg d.w. sediment. Our results show that antibiotic pollution can be a potential threat to both bacterial diversity and an essential ecosystem service they perform in marine sediment

  15. Certification of Trace Elements and Methyl Mercury Mass Fractions in IAEA-456 Marine Sediment Samples

    International Nuclear Information System (INIS)

    2016-01-01

    The primary goal of the IAEA Environment Laboratories is to assist Member States in the use of both stable and radioisotope analytical techniques to understand, monitor and protect the environment. In this context, the major impact of large coastal cities on marine ecosystems is an issue of prime concern for the IAEA and the IAEA Environment Laboratories. The marine pollution assessments required to understand such impacts depend on accurate knowledge of contaminant concentrations in various environmental compartments. The IAEA Environment Laboratories has been assisting national laboratories and regional laboratory networks since the early 1970s through the provision of a reference material programme for the analysis of radionuclides, trace elements and organic compounds in marine samples. Quality assurance, quality control and associated good laboratory practice are essential components of all marine environmental monitoring studies. Quality control procedures are commonly based on the analysis of certified reference materials and reference samples in order to validate analytical methods used in monitoring studies and to assess t h e reliability and comparability of measurement data. Data that are not based on adequate quality assurance and quality control can be erroneous, and their misuse can lead to poor environmental management decisions. A marine sediment sample with certified mass amount contents for aluminium, arsenic, cadmium chromium, cobalt, copper, iron, lead, mercury, methyl mercury, manganese, nickel, vanadium and zinc was recently produced by the IAEA Environment Laboratories. This publication presents the sample preparation methodology, including material homogeneity and the stability study, the selection of laboratories, the evaluation of results from the certification campaign, and the assignment of property values and their associated uncertainty. As a result, certified values for mass fractions and associated expanded uncertainty were

  16. Anaerobic Methane-Oxidizing Microbial Community in a Coastal Marine Sediment: Anaerobic Methanotrophy Dominated by ANME-3.

    Science.gov (United States)

    Bhattarai, Susma; Cassarini, Chiara; Gonzalez-Gil, Graciela; Egger, Matthias; Slomp, Caroline P; Zhang, Yu; Esposito, Giovanni; Lens, Piet N L

    2017-10-01

    The microbial community inhabiting the shallow sulfate-methane transition zone in coastal sediments from marine Lake Grevelingen (The Netherlands) was characterized, and the ability of the microorganisms to carry out anaerobic oxidation of methane coupled to sulfate reduction was assessed in activity tests. In vitro activity tests of the sediment with methane and sulfate demonstrated sulfide production coupled to the simultaneous consumption of sulfate and methane at approximately equimolar ratios over a period of 150 days. The maximum sulfate reduction rate was 5 μmol sulfate per gram dry weight per day during the incubation period. Diverse archaeal and bacterial clades were retrieved from the sediment with the majority of them clustered with Euryarchaeota, Thaumarcheota, Bacteroidetes, and Proteobacteria. The 16S rRNA gene sequence analysis showed that the sediment from marine Lake Grevelingen contained anaerobic methanotrophic Archaea (ANME) and methanogens as archaeal clades with a role in the methane cycling. ANME at the studied site mainly belong to the ANME-3 clade. This study provides one of the few reports for the presence of ANME-3 in a shallow coastal sediment. Sulfate-reducing bacteria from Desulfobulbus clades were found among the sulfate reducers, however, with very low relative abundance. Desulfobulbus has previously been commonly found associated with ANME, whereas in our study, ANME-3 and Desulfobulbus were not observed simultaneously in clusters, suggesting the possibility of independent AOM by ANME-3.

  17. The remobilisation of radionuclides from marine sediments: implications for collective dose assessments

    International Nuclear Information System (INIS)

    Nicholson, S.; MacKenzie, J.

    1988-09-01

    A model of the transfer (in either direction) of radioactivity between seawater and the seabed is described. It was developed, in the first instance, for inclusion in marine collective dose assessment codes. A review of radionuclide-sediment interactions with particular emphasis on the remobilisation process is followed by a description of the seabed model, an investigation of the effect of the model on estimates of collective dose, and a discussion of sedimentation in the Irish Sea in the context of radioactive discharges. The inclusion of the seabed model may lead to marked decreases in the collective dose at short integration times for nuclides with a high affinity for sediments. For discharges of such radionuclides into the Irish Sea, remobilisation may lead to a significant increase in collective dose compared with estimates obtained ignoring this phenomenon; and thirdly, remobilisation appears to have little effect on collective doses integrated to infinite time for discharges from three other locations in the UK. It is also shown that inclusion of the seabed model leads to predictions of a high uptake of plutonium by the seabed for Irish Sea discharges without the need for anomalously high sedimentation rates. (author)

  18. Impacts of discarded plastic bags on marine assemblages and ecosystem functioning.

    Science.gov (United States)

    Green, Dannielle Senga; Boots, Bas; Blockley, David James; Rocha, Carlos; Thompson, Richard

    2015-05-05

    The accumulation of plastic debris is a global environmental problem due to its durability, persistence, and abundance. Although effects of plastic debris on individual marine organisms, particularly mammals and birds, have been extensively documented (e.g., entanglement and choking), very little is known about effects on assemblages and consequences for ecosystem functioning. In Europe, around 40% of the plastic items produced are utilized as single-use packaging, which rapidly accumulate in waste management facilities and as litter in the environment. A range of biodegradable plastics have been developed with the aspiration of reducing the persistence of litter; however, their impacts on marine assemblages or ecosystem functioning have never been evaluated. A field experiment was conducted to assess the impact of conventional and biodegradable plastic carrier bags as litter on benthic macro- and meio-faunal assemblages and biogeochemical processes (primary productivity, redox condition, organic matter content, and pore-water nutrients) on an intertidal shore near Dublin, Ireland. After 9 weeks, the presence of either type of bag created anoxic conditions within the sediment along with reduced primary productivity and organic matter and significantly lower abundances of infaunal invertebrates. This indicates that both conventional and biodegradable bags can rapidly alter marine assemblages and the ecosystem services they provide.

  19. Nitrogen and phosphorus treatment of marine wastewater by a laboratory-scale sequencing batch reactor with eco-friendly marine high-efficiency sediment.

    Science.gov (United States)

    Cho, Seonghyeon; Kim, Jinsoo; Kim, Sungchul; Lee, Sang-Seob

    2017-06-22

    We screened and identified a NH 3 -N-removing bacterial strain, Bacillus sp. KGN1, and a [Formula: see text] removing strain, Vibrio sp. KGP1, from 960 indigenous marine isolates from seawater and marine sediment from Tongyeong, South Korea. We developed eco-friendly high-efficiency marine sludge (eco-HEMS), and inoculated these marine bacterial strains into the marine sediment. A laboratory-scale sequencing batch reactor (SBR) system using the eco-HEMS for marine wastewater from land-based fish farms improved the treatment performance as indicated by 88.2% removal efficiency (RE) of total nitrogen (initial: 5.6 mg/L) and 90.6% RE of total phosphorus (initial: 1.2 mg/L) under the optimal operation conditions (food and microorganism (F/M) ratio, 0.35 g SCOD Cr /g mixed liquor volatile suspended solids (MLVSS)·d; dissolved oxygen (DO) 1.0 ± 0.2 mg/L; hydraulic retention time (HRT), 6.6 h; solids retention time (SRT), 12 d). The following kinetic parameters were obtained: cell yield (Y), 0.29 g MLVSS/g SCOD Cr ; specific growth rate (µ), 0.06 d -1 ; specific nitrification rate (SNR), 0.49 mg NH 3 -N/g MLVSS·h; specific denitrification rate (SDNR), 0.005 mg [Formula: see text]/g MLVSS·h; specific phosphorus uptake rate (SPUR), 0.12 mg [Formula: see text]/g MLVSS·h. The nitrogen- and phosphorus-removing bacterial strains comprised 18.4% of distribution rate in the microbial community of eco-HEMS under the optimal operation conditions. Therefore, eco-HEMS effectively removed nitrogen and phosphorus from highly saline marine wastewater from land-based fish farms with improving SNR, SDNR, and SPUR values in more diverse microbial communities. DO: dissolved oxygen; Eco-HEMS: eco-friendly high efficiency marine sludge; F/M: food and microorganism ratio; HRT: hydraulic retention time; ML(V)SS: mixed liquor (volatile) suspended solids; NCBI: National Center for Biotechnology Information; ND: not determined; qPCR: quantitative real-time polymerase

  20. Assessing global carbon burial during Oceanic Anoxic Event 2, Cenomanian-Turonian boundary event

    Science.gov (United States)

    Owens, J. D.; Lyons, T. W.; Lowery, C. M.

    2017-12-01

    Reconstructing the areal extent and total amount of organic carbon burial during ancient events remains elusive even for the best documented oceanic anoxic event (OAE) in Earth history, the Cenomanian-Turonian boundary event ( 93.9 Ma), or OAE 2. Reports from 150 OAE 2 localities provide a wide global distribution. However, despite the large number of sections, the majority are found within the proto-Atlantic and Tethyan oceans and interior seaways. Considering these gaps in spatial coverage, the pervasive increase in organic carbon (OC) burial during OAE2 that drove carbon isotope values more positive (average of 4‰) can provide additional insight. These isotope data allow us to estimate the total global burial of OC, even for unstudied portions of the global ocean. Thus, we can solve for any `missing' OC sinks by comparing our estimates from a forward carbon-isotope box model with the known, mapped distribution of OC for OAE 2 sediments. Using the known OC distribution and reasonably extrapolating to the surrounding regions of analogous depositional conditions accounts for only 13% of the total seafloor, mostly in marginal marine settings. This small geographic area accounts for more OC burial than the entire modern ocean, but significantly less than the amount necessary to produce the observed isotope record. Using modern and OAE 2 average OC rates we extrapolate further to appropriate depositional settings in the unknown portions of seafloor, mostly deep abyssal plains. This addition significantly increases the predicted amount buried but still does not account for total burial. Additional sources, including hydrocarbon migration, lacustrine, and coal also cannot account for the missing OC. This difference points to unknown portions of the open ocean with high TOC contents or exceptionally high TOC in productive marginal marine regions, which are underestimated in our extrapolations. This difference might be explained by highly productive margins within the

  1. Coupled Mo-U abundances and isotopes in a small marine euxinic basin: Constraints on processes in euxinic basins

    Science.gov (United States)

    Bura-Nakić, Elvira; Andersen, Morten B.; Archer, Corey; de Souza, Gregory F.; Marguš, Marija; Vance, Derek

    2018-02-01

    Sedimentary molybdenum (Mo) and uranium (U) abundances, as well as their isotope systematics, are used to reconstruct the evolution of the oxygenation state of the surface Earth from the geological record. Their utility in this endeavour must be underpinned by a thorough understanding of their behaviour in modern settings. In this study, Mo-U concentrations and their isotope compositions were measured in the water column, sinking particles, sediments and pore waters of the marine euxinic Lake Rogoznica (Adriatic Sea, Croatia) over a two year period, with the aim of shedding light on the specific processes that control Mo-U accumulation and isotope fractionations in anoxic sediment. Lake Rogoznica is a 15 m deep stratified sea-lake that is anoxic and euxinic at depth. The deep euxinic part of the lake generally shows Mo depletions consistent with near-quantitative Mo removal and uptake into sediments, with Mo isotope compositions close to the oceanic composition. The data also, however, show evidence for periodic additions of isotopically light Mo to the lake waters, possibly released from authigenic precipitates formed in the upper oxic layer and subsequently processed through the euxinic layer. The data also show evidence for a small isotopic offset (∼0.3‰ on 98Mo/95Mo) between particulate and dissolved Mo, even at highest sulfide concentrations, suggesting minor Mo isotope fractionation during uptake into euxinic sediments. Uranium concentrations decrease towards the bottom of the lake, where it also becomes isotopically lighter. The U systematics in the lake show clear evidence for a dominant U removal mechanism via diffusion into, and precipitation in, euxinic sediments, though the diffusion profile is mixed away under conditions of increased density stratification between an upper oxic and lower anoxic layer. The U diffusion-driven precipitation is best described with an effective 238U/235U fractionation of +0.6‰, in line with other studied euxinic

  2. Application of microwave energy to speed up the alkaline extraction of humic and fulvic acids from marine sediments

    International Nuclear Information System (INIS)

    Romaris-Hortas, Vanessa; Moreda-Pineiro, Antonio; Bermejo-Barrera, Pilar

    2007-01-01

    The feasibility of microwave energy to speed up the alkaline extraction of humic substances (humic acid, HA, and fulvic acid, FA) from marine sediments has been checked. Extractions were performed by using 20 mL of sodium hydroxide at 0.1 M (two repeated extractions) after an ultrasound-assisted acid pre-treatment of samples to remove the carbonate fraction (ultrasound power at 17 kHz, 10 mL of 6.0 M hydrochloric acid for 15 min). After separation of HA and FA fractions by acidifying with 6 M HCl, the FA fraction (supernatant) was purified by passing the solution through a column of Amberlite XAD-8. Both HA and FA extracts were measured by UV-visible spectrophotometry. All variables affecting the extraction process (sodium hydroxide concentration and volume, ramp and hold times, temperature and number of repeated extractions) have been screened by using a Plackett-Burman design (PBD) as multivariate approach. The variables temperature and number of repeated extractions were the most significant factors (P = 95%) affecting the extraction of both FA and HA from marine sediments. These two variables have led optimum values of 150 deg. C and two repeated extractions. The developed method has been found precise (R.S.D.s of 9% for HA and 12% for FA, for 11 determinations) and its results were comparable in terms of elemental (C, H and N) composition to those obtained after applying methods based on mechanical stirring and ultrasounds assisting. However, higher HA and FA concentrations than those obtained after conventional stirring and ultrasound irradiation were obtained when applying microwave energy. This means a higher efficiency of microwave energy than ultrasounds or mechanical stirring to extract HA and FA fractions from marine sediments. The method was finally applied to different surface marine sediments from the Ria de Arousa estuary

  3. Redox oscillation affecting mercury mobility from highly contaminated coastal sediments: a mesocosm incubation experiment

    Directory of Open Access Journals (Sweden)

    Emili A.

    2013-04-01

    Full Text Available Mercury (Hg mobility at the sediment-water interface was investigated during a laboratory incubation experiment on highly contaminated sediments (up to 23 μg g−1 of the Gulf of Trieste. Undisturbed sediment was collected in front of the Isonzo River mouth, which inflows Hg-rich suspended material originating from the Idrija (NW Slovenia mining district. Since hypoxic and anoxic conditions at the bottom are frequently observed, a redox oscillation was simulated in the laboratory at in situ temperature, using a dark flux chamber. Temporal variations of several parameters were monitored simultaneously: dissolved Hg and methylmercury (MeHg, O2, NH4+, NO3−+NO2−, PO43−, H2S, dissolved Fe and Mn, dissolved inorganic and organic carbon (DIC and DOC. Benthic fluxes of Hg and MeHg were higher under anoxic conditions while re-oxygenation caused concentrations of MeHg and Hg to rapidly drop, probably due to re-adsorption onto Fe/Mn oxyhydroxides and enhanced demethylation. Hence, during anoxic events, sediments of the Gulf of Trieste may be considered as an important source of dissolved Hg species for the water column. However, re-oxygenation of the bottom compartment mitigates Hg and MeHg release from the sediment, thus acting as a natural “defence” from possible interaction between the metal and the aquatic organisms.

  4. The Surface of Venus is Saturated With Ancient Impact Structures, and its Plains are Marine Sediments

    Science.gov (United States)

    Hamilton, W. B.

    2009-05-01

    Conventional interpretations of Venus are forced to fit dubious pre-Magellan conjectures that the planet is as active internally as Earth and preserves no ancient surface features. Plate tectonics obviously does not operate, so it is commonly assumed that the surface must record other endogenic processes, mostly unique to Venus. Imaginative systems of hundreds of tiny to huge rising and sinking plumes and diapirs are invoked. That much of the surface in fact is saturated with overlapping large circular depressions with the morphology of impact structures is obscured by postulating plume origins for selected structures and disregarding the rest. Typical structures are rimmed circular depressions, often multiring, with lobate debris aprons; central peaks are common. Marine-sedimentation features are overlooked because dogma deems the plains to be basalt flows despite their lack of source volcanoes and fissures. The unearthly close correlation between geoid and topography at long to moderate wavelengths requires, in conventional terms, dynamic maintenance of topography by up and down plumes of long-sustained precise shapes and buoyancy. A venusian upper mantle much stronger than that of Earth, because it is cooler or poorer in volatiles, is not considered. (The unearthly large so-called volcanoes and tessera plateaus often are related to rimmed circular depressions and likely are products of impact fluidization and melting.) Plains-saturating impact structures (mostly more obvious in altimetry than backscatter) with diameters of hundreds of km are superimposed as cookie-cutter bites, are variably smoothed and smeared by apparent submarine impact and erosion, and are differentially buried by sediments compacted into them. Marine- sedimentation evidence includes this compaction; long sinuous channels and distributaries with turbidite- channel characteristics and turbidite-like lobate flows (Jones and Pickering, JGSL 2003); radar-smooth surfaces and laminated aspect in

  5. Dissolved inorganic carbon and alkalinity fluxes from coastal marine sediments: Model estimates for different shelf environments and sensitivity to global change

    NARCIS (Netherlands)

    Krumins, V.; Gehlen, M.; Arndt, S.; Van Cappellen, P.; Regnier, P.

    2013-01-01

    We present a one-dimensional reactive transport model to estimate benthic fluxes of dissolved inorganic carbon (DIC) and alkalinity (AT) from coastal marine sediments. The model incorporates the transport processes of sediment accumulation, molecular diffusion, bioturbation and bioirrigation,

  6. In-situ geophysical measurements in marine sediments: Applications in seafloor acoustics and paleoceanography

    Science.gov (United States)

    Gorgas, Thomas Joerg

    Acoustic in-situ sound speeds and attenuation were measured on the Eel River shelf, CA, with the Acoustic Lance between 5 and 15 kHz to 2.0 meters below seafloor (mbsf). A comparison with laboratory ultrasonic geoacoustic data obtained at 400 kHz on cored sediments showed faster in-situ and ultrasonic sound speeds in coarse-grained deposits in water depths to 60 m than in fine-grained deposits below that contour line. Ultrasonic attenuation was often greater than in-situ values and remained almost constant below 0.4 mbsf in these heterogeneous deposits. In-situ attenuation decreased with depth. These observations partly agree with results from other field studies, and with theoretical models that incorporate intergranular friction and dispersion from viscosity as main controls on acoustic wave propagation in marine sediments. Deviations among in-situ and laboratory acoustic data from the Eel Margin with theoretical studies were linked to scattering effects. Acoustic Lance was also deployed in homogeneous, fine-grained sediments on the inner shelf of SE Korea, where free gas was identified in late-September, but not in mid-September 1999. Free gas was evidenced by an abrupt decrease of in-situ sound speed and by characteristic changes in acoustic waveforms. These results suggest the presence of a gassy sediment layer as shallow as 2 mbsf along the 70 m bathymetry line, and was attributed to a variable abundance of free gas on short-term and/or small-regional scales on the SE Korea shelf. Bulk density variations in marine sediments obtained along the Walvis Ridge/Basin, SW Africa, at Ocean Drilling Program (ODP) Sites 1081 to 1084 were spectral-analyzed to compute high-resolution sedimentation rates (SRs) in both the time- and age domains by correctly identifying Milankovitch cycles (MCs). SRs for the ODP sites yielded age-depth models that often correlate positively with biostratigraphic data and with organic mass accumulation rates (MAR Corg), a proxy for

  7. Spatiotemporal distributions of Fukushima-derived radionuclides in nearby marine surface sediments

    Energy Technology Data Exchange (ETDEWEB)

    Kusakabe, M.; Oikawa, S.; Takata, H.; Misonoo, J. [Marine Ecology Research Institute, Tokyo (Japan)

    2013-07-01

    Spatiotemporal distributions of anthropogenic radionuclides in marine surface sediments off Miyagi, Fukushima, and Ibaraki Prefectures were analyzed on the basis of data collected during the monitoring program launched by the Japanese Ministry of Education, Sports, Science and Technology in 2011 right after the Fukushima Dai-ichi Nuclear Power Plant accident began. Concentrations of {sup 137}Cs in the surface sediments varied spatially by two orders of magnitude, from 1.7 to 580 Bq kg-dry{sup -1}, and there was no obvious correlation between {sup 137}Cs concentration and the proximity of the sampling location to the accident site. The total inventory of {sup 137}Cs accumulated in the upper 3 cm of surface sediments in the monitoring area was estimated to be 3.78 x 10{sup 13} Bq, that is, 0.1-2% of the total {sup 137}Cs flux from the plant to the ocean as a result of the accident (the percentage depends on the model used to estimate the total flux). The spatial variations of {sup 137}Cs concentration and inventory depended on two main factors: the {sup 137}Cs concentration in the overlying water during the first several months after the accident and the physical characteristics of the sediments (water content and bulk density). The temporal variations of the concentrations of other anthropogenic radionuclides ({sup 90}Sr, {sup 95}Nb, {sup 110} {sup m}Ag, {sup 125}Sb, {sup 129}Te, and {sup 129} {sup m}Te) in the sediments were also investigated. Activity ratios of these nuclides to {sup 137}Cs suggest that the nuclides themselves were not homogenized before they were removed from seawater to the sediments.

  8. Determination of multi-element composition of Vietnamese marine sediment and tuna fish by k0-standardized neutron activation analysis

    International Nuclear Information System (INIS)

    Manh-Dung Ho; Quang-Thien Tran; Van-Doanh Ho; Thi-Sy Nguyen

    2016-01-01

    The k 0 -standardized neutron activation analysis (k 0 -NAA) has been applied for determination of multiple elements (25 elements: Al, As, Ba, Br, Ca, Cl, Co, Cr, Cs, Cu, Eu, Fe, Hg, K, La, Mg, Na, Rb, Sc, Se, Sm, Th, Ti, V and Zn) in marine sediment and tuna fish. About 50 marine sediment and 9 tuna fish samples were collected in two coastal areas of Vietnam. The health risk index (HRI) values of As and Br were higher than 1.0 for the tuna fish. Also, HRI value of Hg was 8.92 × 10 -1 indicating a relatively high potential health risk, whiles Co and Mn with HRIs = 1.56 × 10 -4 and 8.56 × 10 -4 , respectively, have the lowest potential health risks. Average enrichment factors using Al as a reference element (EF Al ) were higher than 1.5 for Eu, La, Zn, Th, Cs and As in which the highest EF Al value for As was higher than 10. This study showed that the HRI value of As in the tuna fish correlated positively with the EF Al value for the element in the marine sediment. (author)

  9. HEAVY METAL CONTENTS IN MARINE SEDIMENTS AND SEAWATER AT TOTOK BAY AREA, NORTH SULAWESI

    Directory of Open Access Journals (Sweden)

    Delyuzar Ilahude

    2017-07-01

    Full Text Available The study area is located in north-eastern part of Tomini Bay, approximately 80 km south of Manado city, North Sulawesi. This area is closed to submarine tailing disposal system in Buyat Bay. Five marine sediment samples and four water samples from seawater and dig wells have been used for heavy metals (Hg, As, CN analyses by using Atomic Absorption Spectrometry (AAS. This study is a part of research conducted by Marine Geological Institute of Indonesia on morphological changes of seabed in the Totok Bay. The result shows that concentration of mercury (Hg in water samples taken from Ratatotok estuary is higher than standards stipulated Government Regulation (Peraturan Pemerintah/PP No. 82/2001. Meanwhile, concentration of arsenic (As is almost reaching its standard threshold, and conversely cyanide (CN concentration is low. This value of mercury (Hg concentration taken from Ratatotok estuary is much higher than water samples from of Buyat Bay estuary. Significant concentration of mercury (Hg analysed from those particular sampling sites indicated high mercury contamination. Therefore, further examination on ground water of dig wells is necessary, especially for mercury analysis (Hg. Furthermore, comparing the formerly obtained data of mercury concentration in the sediment, this particular study concludes that the sediments in the Totok Bay had contaminated by mercury from gold-processing of illegal mining.

  10. Geochemical association of plutonium in marine sediments from Palomares (Spain)

    International Nuclear Information System (INIS)

    Anton, M.P.; Gasco, C.; Sanchez-Cabeza, J.A.; Pujol, L.

    1994-01-01

    The geochemical association of plutonium in sediments from the marine ecosystem of Palomares has been studied. A sequential leaching technique using selective extractants has been employed to determine the percentages of Pu in the following forms: (a) readily available, (b) exchangeable and adsorbed to specific sites, (c) associated with organic matter, (d) sesquioxides, (e) residual. Plutonium was found to be associated mainly with phases (c), (d) and (e), and therefore, appears to be relatively immobile and not readily available to bottom feeding biota. The effect of different source terms on Pu distribution is also discussed. (orig.)

  11. Effects of dredged sediment disposal on the coastal marine macrobenthic assemblage in Southern Brazil

    Directory of Open Access Journals (Sweden)

    L. G. Angonesi

    Full Text Available The aim of this study was to evaluate the deposition impact of dredged material from Patos lagoon estuary on a benthic macroinvertebrate assemblage structure in an adjacent coastal marine area. Nine sampling stations were chosen at random in the disposal area, and nine others in the same way in an adjacent control area. Samples were collected at a 19 m depth before sediment disposal (11 July 2000, during dredging and disposal operations (25 Oct. 2000, and three months thereafter (24 Aug. 2001. Statistical analysis indicated that sampling periods presented similar characteristics in both the control and disposal sites. Disposal of dredged sediment from Patos lagoon had no detectable detrimental effects upon macrobenthic faunal assemblage at the dumping site. This result is attributed both to adaptation of resident biota to dynamic sedimentary conditions and to the fine estuarine sediment dredged, the dispersion of which in the water column might have minimized sediment deposition and consequent damage to the benthic fauna.

  12. Chemical Composition of the Graphitic Black Carbon Fraction in Riverine and Marine Sediments at Submicron Scales using Carbon X-ray Spectromicroscopy

    International Nuclear Information System (INIS)

    Haberstroh, P.; Brandes, J.; Gelinas, Y.; Dickens, A.; Wirick, S.; Cody, G.

    2006-01-01

    The chemical composition of the graphitic black carbon (GBC) fraction of marine organic matter was explored in several marine and freshwater sedimentary environments along the west coast of North America and the Pacific Ocean. Analysis by carbon x-ray absorption near edge structure (C-XANES) spectroscopy and scanning transmission x-ray microscopy (STXM) show the GBC-fraction of Stillaguamish River surface sediments to be dominated by more highly-ordered and impure forms of graphite, together forming about 80% of the GBC, with a smaller percent of an aliphatic carbon component. Eel River Margin surface sediments had very little highly-ordered graphite, and were instead dominated by amorphous carbon and to a lesser extent, impure graphite. However, the GBC of surface sediments from the Washington State Slope and the Mexico Margin were composed almost solely of amorphous carbon. Pre-anthropogenic, highly-oxidized deep-sea sediments from the open Equatorial Pacific Ocean contained over half their GBC in different forms of graphite as well as highly-aliphatic carbon, low aromatic/highly-acidic aliphatic carbon, low aromatic/highly aliphatic carbon, and amorphous forms of carbon. Our results clearly show the impact of graphite and amorphous C phases in the BC fraction in modern riverine sediments and nearby marine shelf deposits. The pre-anthropogenic Equatorial Pacific GBC fraction is remarkable in the existence of highly-ordered graphite

  13. Carbon dioxide storage in marine sediments - dissolution, transport and hydrate formation kinetics from high-pressure experiments

    Science.gov (United States)

    Bigalke, N. K.; Savy, J. P.; Pansegrau, M.; Aloisi, G.; Kossel, E.; Haeckel, M.

    2009-12-01

    By satisfying thermodynamic framework conditions for CO2 hydrate formation, pressures and temperatures of the deep marine environment are unique assets for sequestering CO2 in clathrates below the seabed. However, feasibility and safety of this storage option require an accurate knowledge of the rate constants governing the speed of physicochemical reactions following the injection of the liquefied gas into the sediments. High-pressure experiments designed to simulate the deep marine environment open the possibility to obtain the required parameters for a wide range of oceanic conditions. In an effort to constrain mass transfer coefficients and transport rates of CO2 in(to) the pore water of marine sediments first experiments were targeted at quantifying the rate of CO2 uptake by de-ionized water and seawater across a two-phase interface. The nature of the interface was controlled by selecting p and T to conditions within and outside the hydrate stability field (HSF) while considering both liquid and gaseous CO2. Concentration increase and hydrate growth were monitored by Raman spectroscopy. The experiments revealed anomalously fast transport rates of dissolved CO2 at conditions both inside and outside the HSF. While future experiments will further elucidate kinetics of CO2 transport and hydrate formation, these first results could have major significance to safety-related issues in the discussion of carbon storage in the marine environment.

  14. Recent advances in marine microbiology: the Indian scenario

    Digital Repository Service at National Institute of Oceanography (India)

    Chandramohan, D.

    reported in the literature. These were tested against a battery genus (86% in sediments, 72% in water, 71% in prawns and 65% in fishes). Laboratory studies indicated that factors suchof test cultures, which included cultures of pathogenic bacte- ria, fungi... that the relative abundance of these organisms couldimportant in anoxic sediments such as mangrove sediments. Sulfate ion represents 7.7% of the salts in seawater and is be one possible reason for higher nitrite concentrations ob- served here. The simultaneous...

  15. Assessing bioavailability of DDT and metabolites in marine sediments using solid-phase microextraction with performance reference compounds.

    Science.gov (United States)

    Bao, Lian-Jun; Jia, Fang; Crago, J; Zeng, Eddy Y; Schlenk, D; Gan, Jay

    2013-09-01

    Solid-phase microextraction (SPME) has often been used to estimate the freely dissolved concentration (Cfree ) of organic contaminants in sediments. A significant limitation in the application of SPME for Cfree measurement is the requirement for attaining equilibrium partition, which is often difficult for strongly hydrophobic compounds such as DDT. A method was developed using SPME with stable isotope-labeled analogues as performance reference compounds (PRCs) to measure Cfree of DDT and metabolites (DDTs) in marine sediments. Six (13) C-labeled or deuterated PRCs were impregnated into polydimethylsiloxane (PDMS) fiber before use. Desorption of PRCs from PDMS fibers and absorption of DDTs from sediment were isotropic in a range of sediments evaluated ex situ under well-mixed conditions. When applied to a historically contaminated marine sediment from a Superfund site, the PRC-SPME method yielded Cfree values identical to those found by using a conventional equilibrium SPME approach (Eq-SPME), whereas the time for mixing was reduced from 9 d to only 9 h. The PRC-SPME method was further evaluated against bioaccumulation of DDTs by Neanthes arenaceodentata in the contaminated sediment with or without amendment of activated carbon or sand. Strong correlations were consistently found between the derived equilibrium concentrations on the fiber and lipid-normalized tissue residues for DDTs in the worms. Results from the present study clearly demonstrated the feasibility of coupling PRCs with SPME sampling to greatly shorten sampling time, thus affording much improved flexibility in the use of SPME for bioavailability evaluation. Copyright © 2013 SETAC.

  16. Draft Genome Sequence of Antimicrobial-Producing Clostridium sp. JC272, Isolated from Marine Sediment

    OpenAIRE

    Tushar, L.; Sasi Jyothsna, T. S.; Sasikala, C.; Ramana, C. V.

    2015-01-01

    We announce the draft genome sequence of Clostridium sp. JC272, isolated from a sediment sample collected from marine habitats of Gujarat, India. Clostridium sp. JC272 is an obligate anaerobe and has the ability to produce antimicrobial compounds. The genome sequence indicates the strain?s capability of producing small peptides (microcins), which are potential novel antibiotics.

  17. Alternative procedure to determine radionuclide concentrations for marine sediment dating

    International Nuclear Information System (INIS)

    Palacios, D; Sajo-Bohus, L.; Alfonso, J.; Perez, K.; Trujillo, M.

    2006-01-01

    The development of an alternative method to prepare and to measure marine sediment samples for dating purpose using high resolution gamma spectrometry is given. To calculate the 137 Cs and the supported and unsupported 210 Pb concentrations, cylindrical tablets subjected to different pressures were analyzed. Mass attenuation coefficients (MAC) were determined by our variant of the transmission method, the Bragg law (using MACs provided by the web program XCOM) and the method of average composition of the analyzed sediment samples. The differences between obtained results are smaller than the experimental error (10%). The influence of pressure and sediment mass on the MAC, mechanical stability of the sample, and self-absorption corrections for different gamma energies is studied. Optimal dimensions of the tablets were determined from considerations on the infinite thickness, minimum detectable activity, precision of results, radiation self-absorption and geometric efficiency. Based on the differential peak absorption analysis, through a relative efficiency curve, a new method to evaluate the existence of radioactive equilibrium between 226 Ra, 222 Rn and its progeny is given. Experimental error of the proposed methodology is evaluated, as well as accuracy, precision and detection limit. With the use of developed methodology, the 210 Pb, 226 Ra and 137 Cs activities in recent sediment samples from near shore of the Orinoco River Delta were determined. The results were comparable with the obtained by two of the most used methods, while precision is improved and radiation self-absorption in sample container is avoided since sample encapsulation is not required. (Full Text)

  18. Marine historical ecology at the Brijuni Islands, Croatia: preliminary results from down-core changes of foraminiferal assemblages

    Science.gov (United States)

    Vidovic, Jelena; Cosovic, Vlasta; Gallmetzer, Ivo; Haselmair, Alexandra; Zuschin, Martin

    2015-04-01

    The Late Holocene in the northern Adriatic is characterized by the eustatic peak of the sea-level rise, followed by the equilibrium between the regional tectonic subsidence and hydro-isostatic emergence and relatively stable sea level for a few thousand years. During this period the area experienced changes in sedimentation rate, food/oxygen availability in the benthic ecosystem and eutrophication with seasonal hypoxic and anoxic events. In order to reconstruct the marine paleoecology in the Brijuni Islands area during this period, a multidisciplinary study was carried out, including geochemical (TOC, trace metals, carbonate content), micropaleontological analyses (benthic foraminifera) and dating of sediments and mollusc shells. The principal aim of this study is to observe the effects of ecological shifts on foraminiferal assemblages during the Late Holocene. One core of 1.5 m length was taken at a sampling station south of Veli Brijuni Island, located within a marine protected area with no fishing/dredging pressure (Croatian national park). The core was sliced into smaller subsamples, and four sediment fractions of each subsample (63, 125, 250 and 500 µm) were analyzed for standard properties of the foraminiferal community (species richness, faunal composition, biodiversity indices), in comparison with relevant physical and geochemical properties of the sediment. The results concerning changes in foraminiferal species composition and abundance point to differences within the core: surface sediments are dominated by suspension feeders (Planorbulina mediterranensis, Lobatula lobatula, Cibicides variabilis, Cibicides refulgens), whereas deposit feeders (genera Textularia, Siphonaperta, Adelosina, Trioculina) appear in higher abundances at approximately 30 cm of the sediment depth and dominate down-core. Species richness in the first 30 cm is lower (10 to 34 species per sample) in comparison to the middle part of the core (39 to 53 species), and decreases again at

  19. Biodegradation of dispersed marine fuel oil in sediment under engineered pre-spill application strategy

    International Nuclear Information System (INIS)

    Hua, J.

    2006-01-01

    Biodegradation of marine fuel oil was studied by monitoring changes in residual oil and populations of microorganisms in marine sediments. Biodegradation rates for dispersant and soap water were 2.09 and 2.27 g/kg per day, respectively, under pre-application strategy, suggesting that the strategy may promote MFO dispersion and provide with sufficient source of food. The effect of temperature on the effectiveness of pre-application strategy is particularly obvious for the growth of fungi and Pseudomonas maltophilia. The effect of pre-application of soap water on the tolerance of aerobic bacteria, Escherichia coli, and P. maltophilia, was gradually diminished within 25-33 days. (author)

  20. Microbial Formation of Ethane in Anoxic Estuarine Sediments

    OpenAIRE

    Oremland, Ronald S.

    1981-01-01

    Estuarine sediment slurries produced methane and traces of ethane when incubated under hydrogen. Formation of methane occurred over a broad temperature range with an optimum above 65°C. Ethane formation had a temperature optimum at 40°C. Formation of these two gases was inhibited by air, autoclaving, incubation at 4 and 80°C, and by the methanogenic inhibitor, 2-bromoethanesulfonic acid. Ethane production was stimulated by addition of ethylthioethanesulfonic acid, and production from ethylthi...

  1. Implications of S1 tephra findings in Dead Sea and Tayma palaeolake sediments for marine reservoir age estimation and palaeoclimate synchronisation

    Science.gov (United States)

    Neugebauer, Ina; Wulf, Sabine; Schwab, Markus J.; Serb, Johanna; Plessen, Birgit; Appelt, Oona; Brauer, Achim

    2017-08-01

    Here we report on the first findings of a cryptotephra in the Holocene lacustrine sediment records of the Dead Sea and Tayma palaeolake (NW Arabian Peninsula). The major element glass composition of this rhyolitic tephra is identical to the distal 'S1' tephra layer identified in the Yammoûneh palaeolake (Lebanon), in a marine sediment record from the SE Levantine basin and in the Sodmein Cave archaeological site in Egypt. The S1 tephra corresponds to the early Holocene 'Dikkartın' dome eruption of the Erciyes Dağ volcano in central Anatolia (Turkey) and has been dated in the marine record at 8830 ± 140 cal yr BP. We present new age estimates of the S1 tephra based on radiocarbon dating of terrestrial plant remains and pollen concentrates revealing ages of 8939 ± 83 cal yr BP in the Dead Sea sediments and 9041 ± 254 cal yr BP in Tayma. The precise date from the Dead Sea allows refining the early Holocene marine reservoir age in the SE Levantine Sea to ca. 320 ± 50 years. Synchronisation of marine and terrestrial palaeoclimate records in the eastern Mediterranean region using the S1 tephra further suggests a time-transgressive expansion of the early Holocene humid period.

  2. Measurement and modeling of polychlorinated biphenyl bioaccumulation from sediment for the marine polychaete neanthes arenaceodentata and response to sorbent amendment

    Science.gov (United States)

    Janssen, E.M.-L.; Croteau, M.-N.; Luoma, S.N.; Luthy, R.G.

    2010-01-01

    Bioaccumulation rates of polychlorinated biphenyls (PCBs) for the marine polychaete Neanthes arenaceodentata were characterized, including PCB uptake rates from water and sediment, and the effect of sorbent amendment to the sediment on PCB bioavailability, organism growth, and lipid content. Physiological parameters were incorporated into a biodynamic model to predict contaminant uptake. The results indicate rapid PCB uptake from contaminated sediment and significant organism growth dilution during time-series exposure studies. PCB uptake from the aqueous phase accounted for less than 3% of the total uptake for this deposit-feeder. Proportional increase of gut residence time and assimilation efficiency as a consequence of the organism's growth was assessed by PCB uptake and a reactor theory model of gut architecture. Pulse-chase feeding and multilabeled stable isotope tracing techniques proved high sediment ingestion rates (i.e., 6?10 times of dry body weight per day) indicating that such deposit-feeders are promising biological indicators for sediment risk assessment. Activated carbon amendment reduced PCB uptake by 95% in laboratory experiments with no observed adverse growth effects on the marine polychaete. Biodynamic modeling explained the observed PCB body burdens for N. arenaceodentata, with and without sorbent amendment. ?? 2009 American Chemical Society.

  3. A new marine sediment certified reference material (CRM) for the determination of persistent organic contaminants: IAEA-459.

    Science.gov (United States)

    Tolosa, Imma; Cassi, Roberto; Huertas, David

    2018-04-11

    A new marine sediment certified reference material (IAEA 459) with very low concentrations (μg kg -1 ) for a variety of persistent organic contaminants (POPs) listed by the Stockholm Convention, as well as other POPs and priority substances (PSs) listed in many environmental monitoring programs was developed by the IAEA. The sediment material was collected from the Ham River estuary in South Korea, and the assigned final values were derived from robust statistics on the results provided by selected laboratories which demonstrated technical and quality competence, following the guidance given in ISO Guide 35. The robust mean of the laboratory means was assigned as certified values, for those compounds where the assigned value was derived from at least five datasets and its relative expanded uncertainty was less than 40% of the assigned value (most of the values ranging from 8 to 20%). All the datasets were derived from at least two different analytical techniques which have allowed the assignment of certified concentrations for 22 polychlorinated biphenyl (PCB) congeners, 6 organochlorinated (OC) pesticides, 5 polybrominated diphenyl ethers (PBDEs), and 18 polycyclic aromatic hydrocarbon (PAHs). Mass fractions of compounds that did not fulfill the criteria of certification are considered information values, which include 29 PAHs, 11 PCBs, 16 OC pesticides, and 5 PBDEs. The extensive characterization and associated uncertainties at concentration levels close to the marine sediment quality guidelines will make CRM 459 a valuable matrix reference material for use in marine environmental monitoring programs.

  4. Formation of Calcium Silicates during Ignition of Marine Sediments and its Implication on the State of Silica on the Sea Floor

    International Nuclear Information System (INIS)

    Duursma, E.K.; Bosch, C.J.; Eisma, D.

    1976-01-01

    Anomalies in the formation of calcium silicates in various marine sediment samples were observed on ignition at 800°C. The hypothesis is put forward that silica, originating from the land and from marine diatoms, undergoes a slow hydrolysis in the seabed and becomes more reactive. (author)

  5. Properties of bricks produced from Greenlandic marine sediments

    DEFF Research Database (Denmark)

    Bertelsen, Ida Maria Gieysztor; Belmonte, Louise Josefine; Chen, Wan

    2015-01-01

    miniature bricks (54×54×60 mm3) of MS from Sisimiut. Brick pellets were prepared in order to determine an optimal composition and production method, based on investigations of the firing temperature and time,forming pressure, initial forming water content, and content of granite waste (CR). Miniature bricks......This study investigated the possibility of a local brick production from fine grained marine sediments (MS) near Sisimiut, Greenland. The assessment is based on the physical and mechanical properties of clay bricks concerning the resistance to the harsh, Arctic weather conditions, together...... were then prepared according to the optimal conditions and formed at a pressure of 20 MPa, fired at 1020 ºC for 3.5 days at the brickwork Wienerberger Tegl in Helsinge, Denmark. The durability properties such as porosity, water absorption, bulk density, linear shrinkage, and compressive strength (only...

  6. Distribution coefficient of plutonium between sediment and seawater

    International Nuclear Information System (INIS)

    Duursma, E.K.; Parsi, P.

    1974-01-01

    Using plutonium 237 as a tracer, a series of experiments were conducted to determine the distribution coefficient of plutonium onto sediments both under oxic and anoxic conditions, where the plutonium was added to seawater in three different valence states: III, IV and VI

  7. Early Cretaceous marine sediments of the Lower Saxony Basin. The Gildehaus Sandstone

    Energy Technology Data Exchange (ETDEWEB)

    Dellepiane, S.; Weiel, D. [Wintershall Holding GmbH, Barnstorf (Germany); Gerwert, D.; Mutterlose, J. [Bochum Univ. (Germany). Inst. fuer Geologie, Mineralogie und Geophysik

    2013-08-01

    During the Early Cretaceous (Berriasian - Aptian) the Lower Saxony Basin (LSB) formed the southernmost extension of the North Sea Basin. Sedimentation patterns of the LSB were controlled by divergent dextral shear movement causing differential subsidence related to early rifting in the North Sea. Up to 2000m of fine grained mudstones accumulated in the basin centre, while marginal marine, coarser grained siliciclastics were deposited along the western and southern margins of the LSB. The western marginal facies, outcropping along the Dutch-German border, is characterised by shallow marine sandstones of Valanginian - Hauterivian age. These units, which are separated by clay rich intervals, include the Bentheim Sdst., the Dichotomites Sdst., the Grenz Sdst., the Noricum Sdst. and the Gildehaus Sdst. These sandstones form a series of overall backstepping units, controlled by a main transgressive trend. Economically important are the Bentheim Sdst. and the Gildehaus Sdst., with a long oil producing history. The Bentheim Sdst. (early Valanginian) has been interpreted as an overall retrograding unit related to an incised valley infill with material mainly coming from the South. Tidal processes dominated the deposition of the Bentheim Sdst. The origin and genesis of the Gildehaus Sdst. (mid Hauterivian) is, however, less well understood. Here we present data from two wells drilled to the Gildehaus Sdst. (Emlichheim oil field) which provide evidence for a two fold subdivision of the unit. A well sorted massive quartz sandstone is followed by an interval composed of reworked coarse clastics of massflow origin. Micropalaeontological evidence suggests a fully marine, hemi-pelagic origin of the mud dominated matrix throughout the Gildehaus Sdst. These findings indicate a depositional environment quite different from that of the Bentheim Sdst. Short termed pulses of substantial input of clastic material from two different sources in the West to Southwest punctuated the overall

  8. Marine lake as in situ laboratory for studies of organic matter influence on speciation and distribution of trace metals

    Science.gov (United States)

    Mlakar, Marina; Fiket, Željka; Geček, Sunčana; Cukrov, Neven; Cuculić, Vlado

    2015-07-01

    Karst marine lakes are unique marine systems, also recognized as in situ "laboratories" in which geochemical processes on a different scale compared to the open sea, can be observed. In this study, organic matter cycle and its impact on distribution of trace metals in the marine lake Mir, located on Dugi Otok Island, in the central part of the eastern Adriatic Sea, was investigated for the first time. Studied marine lake is small, isolated, shallow basin, with limited communication with the open sea. Intense spatial and seasonal variations of organic matter, dissolved and particulate (DOC, POC), and dissolved trace metals concentrations in the water column of the Lake are governed predominantly by natural processes. Enhanced oxygen consumption in the Lake during summer season, high DOC and POC concentrations and low redox potential result in occasional occurrence of anoxic conditions in the bottom layers with appearance of sulfur species. Speciation modeling showed that dissolved trace metals Cu, Pb and Zn, are mostly bound to organic matter, while Cd, Co and Ni are present predominantly as free ions and inorganic complexes. Trace metals removal from the water column and their retention in the sediment was found to depend on the nature of the relationship between specific metal and organic or inorganic phases, sulfides, Fe-oxyhydroxydes or biogenic calcite. The above is reflected in the composition of the sediments, which are, in addition to influence of karstic background and bathymetry of the basin, significantly affected by accumulation of detritus at the bottom of the Lake.

  9. Microplastic pollution in the marine waters and sediments of Hong Kong.

    Science.gov (United States)

    Tsang, Y Y; Mak, C W; Liebich, C; Lam, S W; Sze, E T-P; Chan, K M

    2017-02-15

    The presence of plastic waste with a diameter of less than 5mm ("microplastics") in marine environments has prompted increasing concern in recent years, both locally and globally. We conducted seasonal surveys of microplastic pollution in the surface waters and sediments from Deep Bay, Tolo Harbor, Tsing Yi, and Victoria Harbor in Hong Kong between June 2015 and March 2016. The average concentrations of microplastics in local coastal waters and sediments respectively ranged from 51 to 27,909particles per 100m 3 and 49 to 279particles per kilogram. Microplastics of different shapes (mainly fragments, lines, fibers, and pellets) were identified as polypropylene, low-density polyethylene, high-density polyethylene, a blend of polypropylene and ethylene propylene, and styrene acrylonitrile by means of Attenuated Total Reflectance - Fourier Transform Infrared Spectroscopy. This is the first comprehensive study to assess the spatial and temporal variations of microplastic pollution in Hong Kong coastal regions. Copyright © 2016 Elsevier Ltd. All rights reserved.

  10. Biogeochemical Insights into B-Vitamins in the Coastal Marine Sediments of San Pedro Basin, CA

    Science.gov (United States)

    Monteverde, D.; Berelson, W.; Baronas, J. J.; Sanudo-Wilhelmy, S. A.

    2015-12-01

    Coastal marine sediments support a high abundance of mircoorganisms which play key roles in the cycling of nutrients, trace metals, and carbon, yet little is known about many of the cofactors essential for their growth, such as the B-vitamins. The suite of B-vitamins (B1, B2, B6, B7, B12) are essential across all domains of life for both primary and secondary metabolism. Therefore, studying sediment concentrations of B-vitamins can provide a biochemical link between microbial processes and sediment geochemistry. Here we present B-vitamin pore water concentrations from suboxic sediment cores collected in September 2014 from San Pedro Basin, a silled, low oxygen, ~900 m deep coastal basin in the California Borderlands. We compare the B-vitamin concentrations (measured via LCMS) to a set of geochemical profiles including dissolved Fe (65-160 μM), dissolved Mn (30-300 nM), TCO2, solid phase organic carbon, and δ13C. Our results show high concentrations (0.8-3nM) of biotin (B7), commonly used for CO2 fixation as a cofactor in carboxylase enzymes. Thiamin (B1) concentrations were elevated (20-700nM), consistent with previous pore water measurements showing sediments could be a source of B1 to the ocean. Cobalamin (B12), a cofactor required for methyl transfers in methanogens, was also detected in pore waters (~4-40pM). The flavins (riboflavin [B2] and flavin mononucleotide[FMN]), molecules utilized in external electron transfer, showed a distinct increase with depth (10-90nM). Interestingly, the flavin profiles showed an inverse trend to dissolved Fe (Fe decreases with depth) providing a potential link to culture experiments which have shown extracellular flavin release to be a common trait in some metal reducers. As some of the first B-vitamin measurements made in marine sediments, these results illustrate the complex interaction between the microbial community and surrounding geochemical environment and provide exciting avenues for future research.

  11. Dynamic transition of chemolithotrophic sulfur-oxidizing bacteria in response to amendment with nitrate in deposited marine sediments

    Directory of Open Access Journals (Sweden)

    Tomo eAoyagi

    2015-05-01

    Full Text Available Although environmental stimuli are known to affect the structure and function of microbial communities, their impact on the metabolic network of microorganisms has not been well investigated. Here, geochemical analyses, high-throughput sequencing of 16S rRNA genes and transcripts, and isolation of potentially relevant bacteria were carried out to elucidate the anaerobic respiration processes stimulated by nitrate (20 mM amendment of marine sediments. Marine sediments deposited by the Great East Japan Earthquake in 2011 were incubated anaerobically in the dark at 25°C for 5 days. Nitrate in slurry water decreased gradually for 2 days, then more rapidly until its complete depletion at day 5; production of N2O followed the same pattern. From day 2 to 5, the sulfate concentration increased and the sulfur content in solid-phase sediments significantly decreased. These results indicated that denitrification and sulfur oxidation occurred simultaneously. Illumina sequencing revealed the proliferation of known sulfur oxidizers, i.e., Sulfurimonas spp. and Chromatiales bacteria, which accounted for approximately 43.5% and 14.8% of the total population at day 5, respectively. They also expressed 16S rRNA to a considerable extent, whereas the other microorganisms, e.g., iron(III reducers and methanogens, became metabolically active at the end of the incubation. Extinction dilution culture in a basal-salts medium supplemented with sulfur compounds and nitrate successfully isolated the predominant sulfur oxidizers: Sulfurimonas sp. strain HDS01 and Thioalkalispira sp. strain HDS22. Their 16S rRNA genes showed 95.2−96.7% sequence similarity to the closest cultured relatives and they grew chemolithotrophically on nitrate and sulfur. Novel sulfur-oxidizing bacteria were thus directly involved in carbon fixation under nitrate-reducing conditions, activating anaerobic respiration processes and the reorganization of microbial communities in the deposited marine

  12. Sediment Contaminants and Infauna Associated with Recreational Boating Structures in a Multi-Use Marine Park

    Science.gov (United States)

    Sim, Vivian X. Y.; Dafforn, Katherine A.; Simpson, Stuart L.; Kelaher, Brendan P.; Johnston, Emma L.

    2015-01-01

    Multi-use marine parks achieve conservation through spatial management of activities. Zoning of marine parks in New South Wales, Australia, includes high conservation areas and special purpose zones (SPZ) where maritime activities are concentrated. Although such measures geographically constrain anthropogenic impacts, we have limited understanding of potential ecological effects. We assessed sediment communities and contaminants adjacent to boating infrastructure (boat ramps, jetties and a marina) in a SPZ from the Clyde Estuary in Batemans Marine Park. Metal concentrations and fines content were elevated at boating structures compared to reference sites. Species richness was higher at sites with boating structures, where capitellid polychaetes and nematodes dominated the communities. Changes associated with boating structures were localised and did not extend beyond breakwalls or to reference sites outside the SPZ. The study highlights the benefits of appropriate zoning in a multi-use marine park and the potential to minimise stress on pristine areas through the application of spatial management. PMID:26086427

  13. Sediment Contaminants and Infauna Associated with Recreational Boating Structures in a Multi-Use Marine Park.

    Science.gov (United States)

    Sim, Vivian X Y; Dafforn, Katherine A; Simpson, Stuart L; Kelaher, Brendan P; Johnston, Emma L

    2015-01-01

    Multi-use marine parks achieve conservation through spatial management of activities. Zoning of marine parks in New South Wales, Australia, includes high conservation areas and special purpose zones (SPZ) where maritime activities are concentrated. Although such measures geographically constrain anthropogenic impacts, we have limited understanding of potential ecological effects. We assessed sediment communities and contaminants adjacent to boating infrastructure (boat ramps, jetties and a marina) in a SPZ from the Clyde Estuary in Batemans Marine Park. Metal concentrations and fines content were elevated at boating structures compared to reference sites. Species richness was higher at sites with boating structures, where capitellid polychaetes and nematodes dominated the communities. Changes associated with boating structures were localised and did not extend beyond breakwalls or to reference sites outside the SPZ. The study highlights the benefits of appropriate zoning in a multi-use marine park and the potential to minimise stress on pristine areas through the application of spatial management.

  14. Sediment Contaminants and Infauna Associated with Recreational Boating Structures in a Multi-Use Marine Park.

    Directory of Open Access Journals (Sweden)

    Vivian X Y Sim

    Full Text Available Multi-use marine parks achieve conservation through spatial management of activities. Zoning of marine parks in New South Wales, Australia, includes high conservation areas and special purpose zones (SPZ where maritime activities are concentrated. Although such measures geographically constrain anthropogenic impacts, we have limited understanding of potential ecological effects. We assessed sediment communities and contaminants adjacent to boating infrastructure (boat ramps, jetties and a marina in a SPZ from the Clyde Estuary in Batemans Marine Park. Metal concentrations and fines content were elevated at boating structures compared to reference sites. Species richness was higher at sites with boating structures, where capitellid polychaetes and nematodes dominated the communities. Changes associated with boating structures were localised and did not extend beyond breakwalls or to reference sites outside the SPZ. The study highlights the benefits of appropriate zoning in a multi-use marine park and the potential to minimise stress on pristine areas through the application of spatial management.

  15. Radioactivity, radiological risk and metal pollution assessment in marine sediments from Calabrian selected areas, southern Italy

    Science.gov (United States)

    Caridi, F.; Messina, M.; Faggio, G.; Santangelo, S.; Messina, G.; Belmusto, G.

    2018-02-01

    The two most significant categories of physical and chemical pollutants in sediments (radionuclides and metals) were investigated in this article, in order to evaluate pollution levels in marine sediments from eight different selected sites of the Calabria region, south of Italy. In particular samples were analyzed to determine natural and anthropic radioactivity and metal concentrations, in order to assess any possible radiological hazard, the level of contamination and the possible anthropogenic impact in the investigated area. Activity concentrations of 226Ra, 232Th, 40K and 137Cs were measured by High Purity Germanium (HPGe) gamma spectrometry. The obtained results show that, for radium (in secular equilibrium with uranium), the specific activity ranges from ( 14 ± 1) Bq/kg dry weight (d.w.) to ( 54 ± 9) Bq/kg d.w.; for thorium, from ( 12 ± 1) Bq/kg d.w. to ( 83 ± 8) Bq/kg d.w.; for potassium, from ( 470 ± 20) Bq/kg d.w. to ( 1000 ± 70) Bq/kg d.w. and for cesium it is lower than the minimum detectable activity value. The absorbed gamma dose rate in air (D), the annual effective dose equivalent (AEDE) outdoor and the external hazard index ( H_ex) were calculated to evaluate any possible radiological risk, mainly due to the use of marine sediments for the beach nourishment. The results show low levels of radioactivity, thus discarding any significant radiological risk. Some metals (As, Cd, Cr tot, Hg, Ni, Pb, Cu, Zn, Mn and Fe), that could be released into the environment by both natural and anthropogenic sources, were investigated through inductively coupled plasma mass spectrometry (ICP-MS) measurements and compared with the limits set by the Italian Legislation, to assess any possible contamination. Experimental results show that they are much lower than the contamination threshold value, thus excluding their presence as pollutants. The degree of sediment contaminations were quantified using enrichment factor ( EF) and geoaccumulation index ( I geo) for

  16. Distributions of radionuclides among green alga (Ulva pertusa), sea water and marine sediment

    International Nuclear Information System (INIS)

    Nakamura, Ryoichi; Suzuki, Yuzuru; Ueda, Taishi

    1976-01-01

    Distributions of radionuclides ( 60 Co, 137 Cs, 95 Zr- 95 Nb and 106 Ru- 106 Rh) among green alga (Ulva pertusa), sea water and marine sediment were examined by radioisotope tracer experiment in order to estimate the influence of sediment on the accumulation of radionuclides by the alga. By the application of the compartment model to the experimental results, exponential formulas of distributions were obtained. Through comparison of the transfer coefficients of radionuclides calculated from the exponential formulas, the influence of the sediment on the accumulation of the radionuclides by the green alga was determined to be the largest for 60 Co, followed by 95 Zr,- 95 Nb, 106 Ru- 106 Rh and 137 Cs in this order. The activity ratios of 95 Zr- 95 Nb and 106 Ru- 106 Rh calculated from the transfer coefficients are larger for the alga than for the sediment, inversely those of 60 Co and 137 Cs show higher values for the sediment than for the alga. Especially, in the case of 60 Co, the activity ratio for the sediment is approximately 20 times greater than that for the alga. Biological half lives in green alga estimated from the transfer coefficients were 10 days for 60 Co, 7 days for 137 Cs, 26 days for 95 Zr- 95 Nb and 24 days for 95 Zr- 95 Nb and 24 days for 106 Ru- 106 Rh. (auth.)

  17. Arctic Ocean circulation during the anoxic Eocene Azolla event

    Science.gov (United States)

    Speelman, Eveline; Sinninghe Damsté, Jaap; März, Christian; Brumsack, Hans; Reichart, Gert-Jan

    2010-05-01

    The Azolla interval, as encountered in Eocene sediments from the Arctic Ocean, is characterized by organic rich sediments ( 4wt% Corg). In general, high levels of organic matter may be caused by increased productivity, i.e. extensive growth of Azolla, and/or enhanced preservation of organic matter, or a combination of both. Anoxic (bottom) water conditions, expanded oxygen minimum zones, or increased sedimentation rates all potentially increase organic matter preservation. According to plate tectonic, bathymetric, and paleogeographic reconstructions, the Arctic Ocean was a virtually isolated shallow basin, with one possible deeper connection to the Nordic Seas represented by a still shallow Fram Strait (Jakobsson et al., 2007), hampering ventilation of the Arctic Basin. During the Azolla interval surface waters freshened, while at the same time bottom waters appear to have remained saline, indicating that the Arctic was highly stratified. The restricted ventilation and stratification in concert with ongoing export of organic matter most likely resulted in the development of anoxic conditions in the lower part of the water column. Whereas the excess precipitation over evaporation maintained the freshwater lid, sustained input of Nordic Sea water is needed to keep the deeper waters saline. To which degree the Arctic Ocean exchanged with the Nordic Seas is, however, still largely unknown. Here we present a high-resolution trace metal record (ICP-MS and ICP-OES) for the expanded Early/Middle Eocene section capturing the Azolla interval from Integrated Ocean Drilling Program (IODP) Expedition 302 (ACEX) drilled on the Lomonosov Ridge, central Arctic Ocean. Euxinic conditions throughout the interval resulted in the efficient removal of redox sensitive trace metals from the water column. Using the sedimentary trace metal record we also constrained circulation in the Arctic Ocean by assessing the relative importance of trace metal input sources (i.e. fluvial, eolian, and

  18. An improved method for quantitatively measuring the sequences of total organic carbon and black carbon in marine sediment cores

    Science.gov (United States)

    Xu, Xiaoming; Zhu, Qing; Zhou, Qianzhi; Liu, Jinzhong; Yuan, Jianping; Wang, Jianghai

    2018-01-01

    Understanding global carbon cycle is critical to uncover the mechanisms of global warming and remediate its adverse effects on human activities. Organic carbon in marine sediments is an indispensable part of the global carbon reservoir in global carbon cycling. Evaluating such a reservoir calls for quantitative studies of marine carbon burial, which closely depend on quantifying total organic carbon and black carbon in marine sediment cores and subsequently on obtaining their high-resolution temporal sequences. However, the conventional methods for detecting the contents of total organic carbon or black carbon cannot resolve the following specific difficulties, i.e., (1) a very limited amount of each subsample versus the diverse analytical items, (2) a low and fluctuating recovery rate of total organic carbon or black carbon versus the reproducibility of carbon data, and (3) a large number of subsamples versus the rapid batch measurements. In this work, (i) adopting the customized disposable ceramic crucibles with the microporecontrolled ability, (ii) developing self-made or customized facilities for the procedures of acidification and chemothermal oxidization, and (iii) optimizing procedures and carbon-sulfur analyzer, we have built a novel Wang-Xu-Yuan method (the WXY method) for measuring the contents of total organic carbon or black carbon in marine sediment cores, which includes the procedures of pretreatment, weighing, acidification, chemothermal oxidation and quantification; and can fully meet the requirements of establishing their highresolution temporal sequences, whatever in the recovery, experimental efficiency, accuracy and reliability of the measurements, and homogeneity of samples. In particular, the usage of disposable ceramic crucibles leads to evidently simplify the experimental scenario, which further results in the very high recovery rates for total organic carbon and black carbon. This new technique may provide a significant support for

  19. Metal pollution and ecological risk assessment in marine sediments of Karachi Coast, Pakistan.

    Science.gov (United States)

    Mashiatullah, Azhar; Chaudhary, Muhammad Zaman; Ahmad, Nasir; Javed, Tariq; Ghaffar, Abdul

    2013-02-01

    Concentrations of 12 metals (Fe, Mn, Cr, Mo, Ni, Pb, Se, Sr, U, V, Zn, and Zr) in surface sediments of Karachi Coast, Pakistan were determined to evaluate their distribution and pollution assessment. The measured metals in the sediments were found to be in the range of Fe, 0.84-6.96 %; Mn, 300-1,300 μg/g; Cr, 12.0-319.84 μg/g; Mo, 0.49-2.03 μg/g; Ni, 1.53-58.86 μg/g; Pb, 9.0-49.46 μg/g; Se, 0.25-.86 μg/g; Sr, 192-1185 μg/g; U, 0.19-1.66 μg/g; V, 15.80-118.20 μg/g; Zn, 15.60-666.28 μg/g; and Zr, 44.02-175.26 μg/g. The mean contents of the metal studied were: Fe, 3.07 %, Mn, 0.05 %; Cr, 96.75 μg/g; Mo, 1.34 μg/g; Ni, 31.39 μg/g; Pb, 23.24 μg/g; Se, 0.61 μg/g; Sr, 374.83 μg/g; U, 0.64 μg/g; V, 61.75 μg/g; Zn, 204.75 μg/g; and Zr:76.27 μg/g, and arrangement of the metals from higher to lower mean content in this area is: Fe > Zn > Mn > Sr > Zn > Cr > Zr > V > Ni > Pb > Mo > U > Se. There is no significant correlation among most of these metals, indicating different anthropogenic and natural sources. To assess ecotoxic potential of marine sediments, Numerical Sediment Quality Guidelines were also applied. The concentration of Pb in all the sediments except one was lower than the threshold effect concentration (TECs) showing that there are no harmful effects to marine life from Pb. On the other hand, the concentrations of Cr, Ni, and Zn exceeded TEC in three stations, indicating their potential risk. The degree of pollution in sediments for metals was assessed by calculating enrichment factor (EF) and pollution load index (PLI). The results indicated that sediments of Layari River Mouth Area, Fish Harbour, and KPT Boat Building Area are highly enriched with Cr and Zn (EF > 5). Sediments of Layari River Outfall Zone were moderately enriched with Ni and Pb (EF > 2). The pollution load index was found in the range of 0.98 to 1.34. Lower values of PLI (≤ 1) at most of sampling locations imply no appreciable input from anthropogenic sources. However

  20. Rhodotorula portillonensis sp. nov., a basidiomycetous yeast isolated from Antarctic shallow-water marine sediment.

    Science.gov (United States)

    Laich, Federico; Vaca, Inmaculada; Chávez, Renato

    2013-10-01

    During the characterization of the mycobiota associated with shallow-water marine environments from Antarctic sea, a novel pink yeast species was isolated. Sequence analysis of the D1/D2 domain of the LSU rDNA gene and 5.8S-ITS regions revealed that the isolated yeast was closely related to Rhodotorula pallida CBS 320(T) and Rhodotorula benthica CBS 9124(T). On the basis of morphological, biochemical and physiological characterization and phylogenetic analyses, a novel basidiomycetous yeast species, Rhodotorula portillonensis sp. nov., is proposed. The type strain is Pi2(T) ( = CBS 12733(T)  = CECT 13081(T)) which was isolated from shallow-water marine sediment in Fildes Bay, King George Island, Antarctica.

  1. Thiosulfate and Sulfite Distributions in Porewater of Marine-Sediments Related to Manganese, Iron, and Sulfur Geochemistry

    DEFF Research Database (Denmark)

    Thamdrup, B; Finster, Kai; Fossing, Henrik

    1994-01-01

    Depth distributions of thiosulfate (S2O32-) and sulfite (SO32-) were measured in the porewaters of a Danish salt marsh and subtidal marine sediments by HPLC analysis after derivatization with DTNP [2,2'-dithiobis(5-nitropyridine)]. The distributions were compared to the redox zonation as indicate...

  2. Determination of distribution coefficient (Kd's) of some artificial and naturally occurring radionuclide in fresh and marine coastal water sediment

    International Nuclear Information System (INIS)

    Al-Masri, M. S.; Mamish, S; Haleem, M. A.

    2004-12-01

    Distribution coefficients of artificial and natural radionuclides in fresh and marine water sediment are used in modeling radionuclide dispersion in water system, and the radiation risk and environmental investigating of impact of radioactive emissions, due to routine operations of nuclear plants or disposal and burial of radioactive waste in the environment. In the present work, distribution coefficient of uranium, lead, polonium, radium (naturally occurring radionuclides that may be emitted into the Syrian environment by the phosphate and oil industry with relatively high concentrations) and caesium 137 and strontium 85, in fresh water sediment (Euphrates River, Orantos River and Mzzerib Lake) and marine coastal water (Lattakia, Tartous and Banias). Distribution coefficients were found to vary between (5.8-17.18)*10 3 , (2.2-8.11)*10 3 , (0.22-2.08)*10 3 , (0.16-0.19)*10 3 , (0.38-0.69)*10 3 and 49-312 for polonium, lead, uranium, radium, cesium and strontium respectively. Results have indicated that most measurement distribution coefficients in the present study were lower than those values reported in IAEA documents for marine coastal sediment. In addition, variations of Kd's with aqueous phase composition and sediment elemental and mineralogical composition and its total organic materials content have been studied, where liner correlation coefficients for each isotope with different parameters have been determined. The obtained data reported in this study can be used for radioactive contaminants dispersion and transfer in Syrian river, lake and coast to assess risks to public due to discharges of the phosphate and oil industry into the Syrian environment. (Authors)

  3. Fallout plutonium in two oxic-anoxic environments

    International Nuclear Information System (INIS)

    Sanchez, A.L.; Murray, J.W.; Schell, W.R.; Miller, L.G.

    1986-01-01

    The profiles of soluble fallout plutonium in two partially anoxic waters revealed minimum concentrations at the O 2 -H 2 S interface, indicating Pu removal onto particulate phases of Fe and other oxidized species that form during the redox cycle. In Saanich Inlet, an intermittently anoxic fjord in Vancouver Island, Canada, the concentration of soluble Pu in the anoxic zone was slightly less than in the oxygenated surface layer. In Soap Lake, a saline meromictic lake in eastern Washington State, Pu concentrations i the permanently anoxic zone were at least an order of magnitude higher than at the surface. Differences in the chemical characteristics of these two waters suggest important chemical species that influenced the observed Pu distribution. In the permanently anoxic zone of Soap Lake, high values of total alkalinity ranging from 940 to 1500 meq liter -1 , sulfide species from 38 to 128 μM, dissolved organic carbon from 163 to 237 mg liter -1 , and total dissolved solids from 80 to 140 ppt, all correlated with the observed high concentration of Pu. In Saanich Inlet, where total alkalinity ranged from 2.1 to 2.4 meq liter -1 and salinity from 25 to 32 per thousand and H 2 S concentration in May 1981 showed a maximum of 8μM, the observed Pu concentrations were significantly lower than for the Soap Lake monimolimnion

  4. Plastic litter in sediments from a marine area likely to become protected (Aeolian Archipelago's islands, Tyrrhenian sea).

    Science.gov (United States)

    Fastelli, Paolo; Blašković, Andrea; Bernardi, Giulia; Romeo, Teresa; Čižmek, Hrvoje; Andaloro, Franco; Russo, Giovanni F; Guerranti, Cristiana; Renzi, Monia

    2016-12-15

    This research aims to define for the first time levels and patterns of different litter groups (macro, meso and microplastics) in sediments from a marine area designed for the institution of a new marine protected area (Aeolian Archipelago, Italy). Microplastics resulted the principal group and found in all samples analyzed, with shape and colours variable between different sampling sites. MPs levels measured in this study are similar to values recorded in harbour sites and lower than reported in Adriatic Sea, while macroplastics levels are notably lower than in harbor sites. Sediment grain-size and island extent resulted not significant in determining levels and distribution of plastic debris among islands. In the future, following the establishment of the MPA in the study area, these basic data will be useful to check for potential protective effects on the levels and distribution of plastic debris. Copyright © 2016 Elsevier Ltd. All rights reserved.

  5. Combining contamination indexes, sediment quality guidelines and multivariate data analysis for metal pollution assessment in marine sediments of Cienfuegos Bay, Cuba.

    Science.gov (United States)

    Peña-Icart, Mirella; Pereira-Filho, Edenir Rodrigues; Lopes Fialho, Lucimar; Nóbrega, Joaquim A; Alonso-Hernández, Carlos; Bolaños-Alvarez, Yoelvis; Pomares-Alfonso, Mario S

    2017-02-01

    The purpose of the present work was to combine several tools for assessing metal pollution in marine sediments from Cienfuegos Bay. Fourteen surface sediments collected in 2013 were evaluated. Concentrations of As, Cu, Ni, Zn and V decreased respect to those previous reported. The metal contamination was spatially distributed in the north and south parts of the bay. According to the contamination factor (CF) enrichment factor (EF) and index of geoaccumulation (I geo ), Cd and Cu were classified in that order as the most contaminated elements in most sediment. Comparison of the total metal concentrations with the threshold (TELs) and probable (PELs) effect levels in sediment quality guidelines suggested a more worrisome situation for Cu, of which concentrations were occasional associated with adverse biological effects in thirteen sediments, followed by Ni in nine sediments; while adverse effects were rarely associated with Cd. Probably, Cu could be considered as the most dangerous in the whole bay because it was classified in the high contamination levels by all indexes and, simultaneously, associated to occasional adverse effects in most samples. Despite the bioavailability was partially evaluated with the HCl method, the low extraction of Ni (<3% in all samples) and Cu (<55%, except sample 3) and the relative high extraction of Cd (50% or more, except sample 14) could be considered as an attenuating (Ni and Cu) or increasing (Cd) factor in the risk assessment of those element. Copyright © 2016. Published by Elsevier Ltd.

  6. Influences of marine sediment on the accumulation of radionuclides by green alga (Ulva pertusa)

    International Nuclear Information System (INIS)

    Nakamura, Ryoichi; Suzuki, Yuzuru; Ueda, Taiji

    1975-01-01

    Distribution of radionuclides ( 60 Co, 137 Cs, 95 Zr- 95 Nb and 106 Ru- 106 Rh) among green alga (Ulva pertusa), sea water and marine sediment were examined by radioisotope tracer experiment in order to estimate the influence of sediment on the accumulation of radionuclides by the alga. By the application of the compartment model to the experimental results, exponential formulas of distributions were obtained. Through comparison of the transfer coefficients of radionuclides calculated from the exponential formulas, the influence of the sediment on the accumulation of the radionuclides by the green alga was determined to be the largest for 60 Co, followed by 95 Zr- 95 Nb, 106 Ru- 106 Rh and 137 Cs in this order. The activity ratios of 95 Zr- 95 Nb and 106 Ru- 106 Rh calculated from the transfer coefficients are larger for the alga than for the sediment, inversely those of 60 Co and 137 Cs show higher values for the sediment than for the alga. Especially, in the case of 60 Co, the activity ratio for the sediment is approximately 20 times greater than that for the alga. Biological half lives in green alga estimated from the transfer coefficients were 10 days for 60 Co, 7 days for 137 Cs, 26 days for 95 Zr- 95 Nb and 24 days for 106 Ru- 106 Rh. (auth.)

  7. Certification of Trace Element Mass Fractions in IAEA-458 Marine Sediment Sample

    International Nuclear Information System (INIS)

    2013-01-01

    The primary goal of the IAEA Environment Laboratories (NAEL) is to help Member States understand, monitor and protect the marine environment. The major impact exerted by large coastal cities on marine ecosystems is therefore of great concern to the IAEA and its Environment Laboratories. Given that marine pollution assessments of such impacts depend on accurate knowledge of contaminant concentrations in various environmental compartments, the NAEL has assisted national laboratories and regional laboratory networks through its Reference Products for Environment and Trade programme since the early 1970s. Quality assurance (QA), quality control (QC) and associated good laboratory practice are essential components of all marine environmental monitoring studies. QC procedures are commonly based on the analysis of certified reference materials and reference samples in order to validate analytical methods used in monitoring studies and to assess reliability and comparability of measurement data. QA can be realized by participation in externally organized laboratory performance studies, also known as interlaboratory comparisons, which compare and evaluate the analytical performance and measurement capabilities of participating laboratories. Data that are not based on adequate QA/QC can be erroneous, and their misuse can lead to incorrect environmental management decisions. This report describes the sample preparation methodology, material homogeneity and stability study, selection of laboratories, evaluation of results from the certification campaign and assignment of property values and their associated uncertainty. As a result, reference values for mass fractions and associated expanded uncertainty for 16 trace elements (Al, As, Cd, Cr, Co, Cu, Fe, Hg, Li, Mn, Ni, Pb, Sr, Sn, V and Zn) in marine sediment were established

  8. MOSAIC: An organic geochemical and sedimentological database for marine surface sediments

    Science.gov (United States)

    Tavagna, Maria Luisa; Usman, Muhammed; De Avelar, Silvania; Eglinton, Timothy

    2015-04-01

    Modern ocean sediments serve as the interface between the biosphere and the geosphere, play a key role in biogeochemical cycles and provide a window on how contemporary processes are written into the sedimentary record. Research over past decades has resulted in a wealth of information on the content and composition of organic matter in marine sediments, with ever-more sophisticated techniques continuing to yield information of greater detail and as an accelerating pace. However, there has been no attempt to synthesize this wealth of information. We are establishing a new database that incorporates information relevant to local, regional and global-scale assessment of the content, source and fate of organic materials accumulating in contemporary marine sediments. In the MOSAIC (Modern Ocean Sediment Archive and Inventory of Carbon) database, particular emphasis is placed on molecular and isotopic information, coupled with relevant contextual information (e.g., sedimentological properties) relevant to elucidating factors that influence the efficiency and nature of organic matter burial. The main features of MOSAIC include: (i) Emphasis on continental margin sediments as major loci of carbon burial, and as the interface between terrestrial and oceanic realms; (ii) Bulk to molecular-level organic geochemical properties and parameters, including concentration and isotopic compositions; (iii) Inclusion of extensive contextual data regarding the depositional setting, in particular with respect to sedimentological and redox characteristics. The ultimate goal is to create an open-access instrument, available on the web, to be utilized for research and education by the international community who can both contribute to, and interrogate the database. The submission will be accomplished by means of a pre-configured table available on the MOSAIC webpage. The information on the filled tables will be checked and eventually imported, via the Structural Query Language (SQL), into

  9. Assessing the Long-Term Efficacy of Geotextiles in Preserving Archaeological Wooden Shipwrecks in the Marine Environment

    Science.gov (United States)

    Pournou, Anastasia

    2017-09-01

    Archaeological wood cannot be found preserved in the marine ecosystem unless it is buried in anoxic or dysoxic sediments. These habitats do not allow the growth and activity of wood degraders, and thus wooden shipwrecks can survive within these environments for centuries. However, due to natural factors or anthropogenic interventions wood can be re-exposed to the oxygenated water column, where it disintegrates rapidly. In such cases, in situ preservation becomes a main priority, as lifting and conservation are not usually feasible. One of the most common in situ preservation methods is the covering of wood with geotextiles. To date however, even though this method has been used worldwide the past decades, its long-term performance and effectiveness hasn't been evaluated. This work presents, for the first time, results on the efficacy of geotextiles used for 12 years on a shipwreck found in the Mediterranean. Fabric performance was evaluated based on wreck timbers condition, its physical, mechanical and hydraulic properties and the ecological and hydrographical profile of the underwater site created, following its application. Obtained results demonstrated that wreck timbers covered with geotextiles did not show signs of attack during the 12 years of in situ preservation. Geotextiles properties were found to be adequately retained when compared with properties of new unused geotextiles. The fabric had entrapped sediment and was colonised by the local flora and fauna, re-establishing anoxic conditions. This work showed that geotextiles can successfully preserve in situ wooden shipwrecks in high biodeterioration risk environments for at least a 10 year period.

  10. Assessing the Long-Term Efficacy of Geotextiles in Preserving Archaeological Wooden Shipwrecks in the Marine Environment

    Science.gov (United States)

    Pournou, Anastasia

    2018-04-01

    Archaeological wood cannot be found preserved in the marine ecosystem unless it is buried in anoxic or dysoxic sediments. These habitats do not allow the growth and activity of wood degraders, and thus wooden shipwrecks can survive within these environments for centuries. However, due to natural factors or anthropogenic interventions wood can be re-exposed to the oxygenated water column, where it disintegrates rapidly. In such cases, in situ preservation becomes a main priority, as lifting and conservation are not usually feasible. One of the most common in situ preservation methods is the covering of wood with geotextiles. To date however, even though this method has been used worldwide the past decades, its long-term performance and effectiveness hasn't been evaluated. This work presents, for the first time, results on the efficacy of geotextiles used for 12 years on a shipwreck found in the Mediterranean. Fabric performance was evaluated based on wreck timbers condition, its physical, mechanical and hydraulic properties and the ecological and hydrographical profile of the underwater site created, following its application. Obtained results demonstrated that wreck timbers covered with geotextiles did not show signs of attack during the 12 years of in situ preservation. Geotextiles properties were found to be adequately retained when compared with properties of new unused geotextiles. The fabric had entrapped sediment and was colonised by the local flora and fauna, re-establishing anoxic conditions. This work showed that geotextiles can successfully preserve in situ wooden shipwrecks in high biodeterioration risk environments for at least a 10 year period.

  11. Diversity of Microbial Communities and Quantitative Chemodiversity in Layers of Marine Sediment Cores from a Causeway (Kaichu-Doro) in Okinawa Island, Japan.

    Science.gov (United States)

    Soliman, Taha; Reimer, James D; Yang, Sung-Yin; Villar-Briones, Alejandro; Roy, Michael C; Jenke-Kodama, Holger

    2017-01-01

    Microbial community diversity and chemodiversity were investigated in marine sediments adjacent to the Okinawan "Kaichu-Doro" Causeway, which was constructed 46 years ago to connect a group of four islands (Henza-jima, Miyagi-jima, Ikei-jima, Hamahiga-jima) to the Okinawan main island. This causeway was not built on pilings, but by land reclamation; hence, it now acts as a long, thin peninsula. The construction of this causeway was previously shown to have influenced the surrounding marine ecosystem, causing ecosystem fragmentation and loss of water circulation. In this study, we collected sediment cores ( n = 10) from five paired sites in 1 m water depths. Each pair of sites consisted of one site each on the immediate north and south sides of the causeway. Originally the members of each pair were much closer to each other (microbial communities and chemical compounds to determine the correlation between chemodiversity and microbial communities among marine sediment cores and layers. Principal coordinate analyses (PCoA) of detected compounds and of bacterial and archaeal operational taxonomic units (OTUs) revealed that the north and south sides of the causeway are relatively isolated, with each side having unique microbial OTUs. Additionally, some bacterial families (e.g., Acidaminobacteraceae, Rhizobiaceae, and Xanthomonadaceae) were found only on the south side of Kaichu-Doro. Interestingly, we found that the relative abundance of OTUs for some microbial families increased from top to bottom, but this was reversed in some other families. We conclude that the causeway has altered microbial community composition and metabolite profiles in marine sediments.

  12. Specific acyclic isoprenoids as biological markers of methanogenic bacteria in marine sediments.

    Science.gov (United States)

    Brassell, S C; Wardroper, A M; Thomson, I D; Maxwell, J R; Eglinton, G

    1981-04-23

    The widespread occurrence of extended hopanoids in sediments and petroleums illustrates the importance of bacterial lipid contributions to geological materials. In archaebacteria, however, hopanoids are absent; their role as structural components of biomembranes is fulfilled by acyclic isoprenoids. Recent studies of the lipid constituents of archaebacteria have greatly extended the range of acyclic isoprenoid skeletons known in organisms (Fig. 1). In particularly, isoprenoids with head-to-head linkages have been identified, and such compounds (for example, 3,7,11,15,18,22,26,30-octamethyldotriacontane, I) have been recognized in petroleum and as degradation products of Messel shale kerogen. Here we report the first recognition of 2,6,10,15,19-pentamethyleicosane (II), a known component of methanogens, in marine sediments of Recent to Cretaceous age (Table 1) and suggest that it and certain other acyclic isoprenoids may be used as biological markers for methanogens.

  13. Intercomparison of radionuclide measurements in marine sediment sample IAEA-135

    International Nuclear Information System (INIS)

    Ballestra, S.; Gastaud, J.; Lopez, J.J.; Parsi, P.; Vas, D.

    1993-08-01

    The results of an intercomparison exercise on a marine sediment from Irish Sea, IAEA-135, designed for the determination of artificial and natural radionuclides levels, are reported. The data from 151 laboratories representing 51 countries have been evaluated. The following are the recommended values, with confidence intervals, for 40 K, 60 Co, 134 Cs, 137 Cs, 154 Eu, 155 Eu, 226 Ra, 228 Ra, 232 Th, 238 Pu, 239+240 Pu (Reference date: 1 January 1992). Information values for 57 Co, 90 Sr, 106 Ru, 125 Sb, 210 Pb, 210 Po, 228 Th, 230 Th, 234 U, 235 U, 238 U and 241 Am are also reported. All values are expressed in Bq kg -1 dry weight. (author)

  14. Distribution of uranium in marine sediments; Distribucion de uranio en sedimentos marinos

    Energy Technology Data Exchange (ETDEWEB)

    Ordonez R, E.; Ramirez T, J.J.; Lopez M, J.; Aspiazu, J. [ININ, 52750 La Marquesa, Estado de Mexico (Mexico); Ruiz F, A.C. [U. Academica Mazatlan, ICML, UNAM (Mexico); Valero C, N. [CONALEP, 52000 Lerma, Estado de Mexico (Mexico)

    2008-07-01

    The marine sediments obtained by means of a sampling nucleus in the Gulf of Tehuantepec, Mexico, they have been object of crystallographic and morphological characterization. The PIXE analysis of some samples in study is shown. The normal methodology to carry out the alpha spectroscopy indicates that the sample should be dissolved, but due to the nature of the marine sediments, it thinks about the necessity to make a fractional separation of the sample components. In each stratum of the profile it separates the organic part and the mineral to recover the uranium. It was observed that in the organic phase, the uranium is in two oxidation states (IV and Vl), being necessary the radiochemical separation with a liquid/liquid column chromatographic that uses the di-2-ethyl hexyl phosphoric acid as stationary phase. The uranium compounds extracts are electrodeposited in fine layers on stainless steel disks to carry out the analysis by alpha spectroscopy. The spectroscopic analysis of the uranium indicates us that for each stratum one has a difference marked in the quotient of activities of {sup 234}U/{sup 238}U that depends on the nature of the studied fraction. These results give us a clear idea about how it is presented the effect of the uranium migration and other radioelements in the biosphere, with what we can determine which are the conditions in that these have their maximum mobility and to know their diffusion patterns in the different media studied. (Author)

  15. MOLECULAR DIAGNOSTIC RATIOS TO ASSESS THE APPORTIONMENT OF PETROLEUM HYDROCARBONS CONTAMINANTION IN MARINE SEDIMENT

    Directory of Open Access Journals (Sweden)

    Agung Dhamar Syakti

    2016-11-01

    Full Text Available As maritime fulcrum nation, in Indonesia, marine environmental analytical chemistry field is still under developed. So that why, this review paper aims to provide basic understanding of the use some molecular diagnostic indices using n-alkanes indexes and polycyclic aromatic hydrocarbons (PAHs diagnostic ratios to estimate the source of apportionment of the hydrocarbons contamination and origin. The n-alkane chromatograms were then used to characterize the predominance of petrogenic or biogenic either terrestrial or aquatic. Furthermore, characterization allowed to discriminate riverine versus marine input. The occurrence of a broad unresolved complex mixture can be an evidence of biodegraded petroleum residues. For aromatic compounds, the prevalence of petrogenic, pyrolitic, and combustion-derived can be easily plotted by using isomers ratio calculation. This paper thus provides useful information on the hydrocarbon contamination origin, especially in marine sediments. Further researches should be undertaken in order to validate the use of molecular diagnostic ratio with isotopic approach.

  16. The geochemistry of marine sediments, island arc magma genesis, and crust-mantle recycling

    International Nuclear Information System (INIS)

    Ben Othman, D.; Paris-6 Univ., 75; White, W.M.; Cornell Univ., Ithaca, NY; Patchett, J.; Arizona Univ., Tucson

    1989-01-01

    To assess the role of sediment subduction and recycling in island arc magma genesis and mantle evolution, we have determined Sr, Nd, and Pb isotope ratios and the concentrations of K, Rb, Cs, Ba, Sr, U, Th, Pb and rare earth elements in 36 modern marine sediments, including Mn nodules, biogenic oozes, and pelagic and hemipelagic clays from the Pacific, Antlantic and Indian Oceans. Sr and Nd isotope ratios and the Sr/Nd concentration ratios in sediments are such that mixing between subducted sediment on the one hand and depleted mantle or subducted oceanic crust on the other can produce mixing arrays which may pass either through or outside of the oceanic basalt Sr-Nd isotope 'mantle array'. Thus whether isotope compositions of island arc volcanics (IAV) plot inside our outside of the mantle array is not a good indication of whether or not their sources contain a subducted sediment component. The presence of subducted sediment in the sources of IAV should lead to Cs/Rb and Pb/Ce ratios which are higher than those in oceanic basalts, and Ba/Rb ratios which may be either higher or lower than oceanic basalts. Simple mixing calculations suggest that as little as a percent or so sediment in island arc magma sources can account for the observed Cs/Rb, Pb/Ce, and Ba/Rb ratios in IAV. However, it does not appear that high Ba/La ratios and negative Ce anomalies in IAV are inherited from sediment in IAV magma sources. It is more likely these features reflect fractionation of alkalis and alkaline earths from rare earths during slab dehydration and metasomatism. Pb isotope ratios in sediments from the Warton Basin south of the Sunda Arc are collinear in 208 Pb/ 204 Pb- 207 Pb/ 204 Pb- 206 Bp/ 204 Pb space with volcanics from West Sunda, but not with volcanics from the East Sunda. This collinearity is consistent with the hypothesis that sediments similar to these are being subducted to the magma genesis zone of the West Sunda Arc. (orig./WB)

  17. Uptake of PCBs contained in marine sediments by the green macroalga Ulva rigida.

    Science.gov (United States)

    Cheney, Donald; Rajic, Ljiljana; Sly, Elizabeth; Meric, Dogus; Sheahan, Thomas

    2014-11-15

    The uptake of PCBs contained in marine sediments by the green macroalga Ulva rigida was investigated in both laboratory and field experiments. Under laboratory conditions, total PCBs (tPCBs) uptake was significantly greater in live vs dead plants. The concentration of tPCB taken up in live plants was greatest in the first 24h (1580 μg kg(-1) dry weight), and then increased at a lower rate from day 2 to 14. Dead plants had a significantly lower tPCB concentration after 24h (609 μg kg(-1) dry weight) and lower uptake rate through day 14. Lesser chlorinated PCB congeners (below 123) made up the majority of PCBs taken up. Congener composition in both laboratory and field experiments was correlated to congener logKow value and sediment content. Field experiments showed that Ulva plants could concentrate PCBs to 3.9 mg kg(-1) in 24h. Thus, U. rigida is capable of removing PCBs in sediments at a rapid rate. Copyright © 2014 Elsevier Ltd. All rights reserved.

  18. Multi-elemental analysis of marine sediments of Manila Bay using x-ray fluorescence spectrometry

    International Nuclear Information System (INIS)

    Rosales, Colleen Marciel Fontelera

    2011-04-01

    An analysis of the marine sediments of Manila Bay was done by employing X-ray fluorescence spectrometry. The general trends observed in sediments are increasing (Ca and Sr), decreasing (Zr), or constant (Cl, Na, S, K) with respect to depth, sometimes, no trend can be observed. These trends are further explained by correlations present among these elements, plus all the other elements. The two X RF data analysis methods Auto Quantify and AXIL were also compared on the basis of the correlation plot obtained. AutoQuantify gave clearer correlations; thus, results from this method were used for constructing correlation plots. Correlations using Microsoft Excel and Stat graphics Centurion X V show that there are naturally occurring [lithogenic (Si, Ti, Al, Mg, Rb, Zn and Fe), biogenic (Ca, Mg), and conservative (Na, Cl)] and non-naturally occurring [mostly anthropogenic, brought to the bodies of water by aeolian or fluvial input (heavy metals Pb-Cu-Zn and Ni-Cr)] correlation present in the sediments. Moreover, pairs of elements that may coexist in a source and not coexist in another (Cr and Mg, Cr and Ni) have also been observed. The heavy metal enrichment was attributed to the burning of fossil fuels, iron and steel manufacturing (present in Valenzuela-Bulacan area), ferry and fishing services and other industrialization activities present in Manila Bay. Marine organisms are affected by the presence of these heavy metals by means of bioaccumulations, and may later on affect humans because of trophic transfer and bio magnification. (author)

  19. Estimating sediment accumulation rates in Manila Bay, a marine pollution hot spot in the Seas of East Asia.

    Science.gov (United States)

    Sta Maria, E J; Siringan, F P; Bulos, A dM; Sombrito, E Z

    2009-01-01

    The GEF/UNDP/IMO/PEMSEA project identifies Manila Bay as among the marine pollution hot spots in the Seas of East Asia. (210)Pb dating of its sediment can provide a historical perspective of its pollution loading. However, the validity of (210)Pb dating in a complex dynamic coastal system of Manila Bay may come into question. Land-based sediment input can be high and physical and biological processes can possibly disturb the sediment layers. In this report, the (210)Pb profiles of sediment cores from different parts of the bay are presented. The linear sedimentation rates are shown to be higher in the recent past and are also variable across the bay. The largest change in sedimentation rate, coincided with the occurrence of a volcanic eruption in 1991 and is shown by applying a variant of the CIC model in sedimentation rate calculations. The data suggest that (210)Pb dating can be useful in estimating relative magnitudes of sedimentation rates, even in a complex dynamic coastal system like Manila Bay.

  20. Levels of Cd, Cu, Pb and V in marine sediments in the vicinity of the Single Buoy Moorings (SBM3) at Mina Al Fahal in the Sultanate of Oman

    International Nuclear Information System (INIS)

    Al-Husaini, Issa; Abdul-Wahab, Sabah; Ahamad, Rahmalan; Chan, Keziah

    2014-01-01

    Highlights: • Assessed metal contamination in the SBM3 marine sediments of Mina Al Fahal, Oman. • Examined heavy metal concentration levels of Cd, Cu, Pb and V. • Mean concentration in the sediments, from highest to lowest, is V > Cu > Pb > Cd. • Highest concentration of V due to waste discharges from nearby heavy tanker traffic. • ICP-OES found low concentrations of all four heavy metals; SMB3 region in good quality. - Abstract: Recently in the Sultanate of Oman, there has been a rapid surge of coastal developments. These developments cause metal contamination, which may affect the habitats and communities at and near the coastal region. As a result, a study was conducted to assess the level of metal contamination and its impact on the marine sediments in the vicinity of the Single Buoy Moorings 3 (SBM3) at Mina Al Fahal in the Sultanate of Oman. Marine subtidal sediment samples were collected from six different stations of the SBM3 for the period ranging from June 2009 to April 2010. These samples were then analyzed for their level and distribution of the heavy metals of cadmium (Cd), copper (Cu), lead (Pb) and vanadium (V). Overall, low concentrations of all four heavy metals were measured from the marine sediments, indicating that the marine at SBM3 is of good quality

  1. Biogeochemical and molecular signatures of anaerobic methane oxidation in a marine sediment.

    Science.gov (United States)

    Thomsen, T R; Finster, K; Ramsing, N B

    2001-04-01

    Anaerobic methane oxidation was investigated in 6-m-long cores of marine sediment from Aarhus Bay, Denmark. Measured concentration profiles for methane and sulfate, as well as in situ rates determined with isotope tracers, indicated that there was a narrow zone of anaerobic methane oxidation about 150 cm below the sediment surface. Methane could account for 52% of the electron donor requirement for the peak sulfate reduction rate detected in the sulfate-methane transition zone. Molecular signatures of organisms present in the transition zone were detected by using selective PCR primers for sulfate-reducing bacteria and for Archaea. One primer pair amplified the dissimilatory sulfite reductase (DSR) gene of sulfate-reducing bacteria, whereas another primer (ANME) was designed to amplify archaeal sequences found in a recent study of sediments from the Eel River Basin, as these bacteria have been suggested to be anaerobic methane oxidizers (K. U. Hinrichs, J. M. Hayes, S. P. Sylva, P. G. Brewer, and E. F. DeLong, Nature 398:802-805, 1999). Amplification with the primer pairs produced more amplificate of both target genes with samples from the sulfate-methane transition zone than with samples from the surrounding sediment. Phylogenetic analysis of the DSR gene sequences retrieved from the transition zone revealed that they all belonged to a novel deeply branching lineage of diverse DSR gene sequences not related to any previously described DSR gene sequence. In contrast, DSR gene sequences found in the top sediment were related to environmental sequences from other estuarine sediments and to sequences of members of the genera Desulfonema, Desulfococcus, and Desulfosarcina. Phylogenetic analysis of 16S rRNA sequences obtained with the primers targeting the archaeal group of possible anaerobic methane oxidizers revealed two clusters of ANME sequences, both of which were affiliated with sequences from the Eel River Basin.

  2. Microbial diversity in methane hydrate-bearing deep marine sediments core preserved in the original pressure.

    Science.gov (United States)

    Takahashi, Y.; Hata, T.; Nishida, H.

    2017-12-01

    In normal coring of deep marine sediments, the sampled cores are exposed to the pressure of the atmosphere, which results in dissociation of gas-hydrates and might change microbial diversity. In this study, we analyzed microbial composition in methane hydrate-bearing sediment core sampled and preserved by Hybrid-PCS (Pressure Coring System). We sliced core into three layers; (i) outside layer, which were most affected by drilling fluids, (ii) middle layer, and (iii) inner layer, which were expected to be most preserved as the original state. From each layer, we directly extracted DNA, and amplified V3-V4 region of 16S rRNA gene. We determined at least 5000 of nucleotide sequences of the partial 16S rDNA from each layer by Miseq (Illumina). In the all layers, facultative anaerobes, which can grow with or without oxygen because they can metabolize energy aerobically or anaerobically, were detected as majority. However, the genera which are often detected anaerobic environment is abundant in the inner layer compared to the outside layer, indicating that condition of drilling and preservation affect the microbial composition in the deep marine sediment core. This study was conducted as a part of the activity of the Research Consortium for Methane Hydrate Resources in Japan [MH21 consortium], and supported by JOGMEC (Japan Oil, Gas and Metals National Corporation). The sample was provided by AIST (National Institute of Advanced Industrial Science and Technology).

  3. Temperature-induced impacts on groundwater quality and arsenic mobility in anoxic aquifer sediments used for both drinking water and shallow geothermal energy production.

    Science.gov (United States)

    Bonte, Matthijs; van Breukelen, Boris M; Stuyfzand, Pieter J

    2013-09-15

    Aquifers used for the production of drinking water are increasingly being used for the generation of shallow geothermal energy. This causes temperature perturbations far beyond the natural variations in aquifers and the effects of these temperature variations on groundwater quality, in particular trace elements, have not been investigated. Here, we report the results of column experiments to assess the impacts of temperature variations (5°C, 11°C, 25°C and 60°C) on groundwater quality in anoxic reactive unconsolidated sandy sediments derived from an aquifer system widely used for drinking water production in the Netherlands. Our results showed that at 5 °C no effects on water quality were observed compared to the reference of 11°C (in situ temperature). At 25°C, As concentrations were significantly increased and at 60 °C, significant increases were observed pH and DOC, P, K, Si, As, Mo, V, B, and F concentrations. These elements should therefore be considered for water quality monitoring programs of shallow geothermal energy projects. No consistent temperature effects were observed on Na, Ca, Mg, Sr, Fe, Mn, Al, Ba, Co, Cu, Ni, Pb, Zn, Eu, Ho, Sb, Sc, Yb, Ga, La, and Th concentrations, all of which were present in the sediment. The temperature-induced chemical effects were probably caused by (incongruent) dissolution of silicate minerals (K and Si), desorption from, and potentially reductive dissolution of, iron oxides (As, B, Mo, V, and possibly P and DOC), and mineralisation of sedimentary organic matter (DOC and P). Copyright © 2013 Elsevier Ltd. All rights reserved.

  4. 226Ra-210Pb-210Po Levels in Marine Biota and Surface Coastal Sediments from the Red Sea, Sudan

    International Nuclear Information System (INIS)

    Sirelkhatim, D.A.; Sam, A.K.; Hassona, R.K.

    2003-01-01

    This paper presents data on 226 Ra, 210 Pb and 210 Po activity concentration levels in multicellular marine algae, molluscs, coral as well as in surface marine sediments collected from the shallower waters of the fringing reefs area extending towards north and south (Flamingo bay) of Port sudan harbour. The analyses were performed adopting a simple time efficient method combining alpha-spectrometry, liquid scintillation and Cerenkov counting technique. Generally speaking, surface sediments from this coastal region are poor in their radioactivity content in contrast to similar data reported from different coastal areas around the globe. There is surface enrichment of 210 Pb and 210 Po with respect to their progenitor 226 Ra as it is evident from the activity ratios of 210 Pb/ 226 Ra (3.03±1.79) and 210 Po/ 226 Ra (2.23±1.56). Among marine plants and animals investigated, the green algae species, Halimeda, and coral species, Favites, show substantial concentration of radium at 8.2 Bq/KXg and 21.9 Bq/KXg dry weight, respectively

  5. Single neuron dynamics during experimentally induced anoxic depolarization

    NARCIS (Netherlands)

    Zandt, B.; Stigen, Tyler; ten Haken, Bernard; Netoff, Theoden; van Putten, Michel Johannes Antonius Maria

    2013-01-01

    We studied single neuron dynamics during anoxic depolarizations, which are often observed in cases of neuronal energy depletion. Anoxic and similar depolarizations play an important role in several pathologies, notably stroke, migraine, and epilepsy. One of the effects of energy depletion was

  6. Phylogenetic Diversity of Archaea and Bacteria in the Anoxic Zone of a Meromictic Lake (Lake Pavin, France)▿ †

    Science.gov (United States)

    Lehours, Anne-Catherine; Evans, Paul; Bardot, Corinne; Joblin, Keith; Gérard, Fonty

    2007-01-01

    The compositions of archaeal and bacterial populations at different depths (60 m [mixolimnion-chemocline interface], 70 m [chemocline-subchemocline interface], 90 m, and 92 m [the water-sediment interface]) in the anoxic zone of the water column in Lake Pavin, a freshwater permanently stratified mountain lake in France, were determined. Phylogenetic trees were constructed from sequences to assess archaeal and bacterial diversity at the four sites. PMID:17261512

  7. Some trace elements in the waters, marine organisms and sediments of the Adriatic by neutron activation analysis

    International Nuclear Information System (INIS)

    Kosta, L.; Ravnik, V.; Byrne, A.R.; Dermelj, M.; Stirn, J.

    1978-01-01

    A number of investigations of trace elements in the waters, organisms and sediments of the Adriatic, using neutron activation analysis with radiochemical separations are reported. These include studies of Hg in mussels from the Northern Adriatic, of Hg and Se in edible animals from the Rijeka region, and of seven elements (As, Cd, Cu, Hg, Mn, Se and Zn) in marine invertebrates from the Slovene coast. Additionally, plankton, sediment cores and water samples were taken from a grid of stations covering the whole Adriatic and analyzed for 6 to 11 of the trace elements As, Cd, Co, Cr, Cu, Fe, Hg, Mn, Sb and Zn (Hg only in water). Generally, levels found were not indicative of pollution as compared with oceanic samples, but some evidence of locally increased levels was found, especially for Hg. The levels of eleven trace elements in three marine Intercomparison samples prepared by the IAEA Monaco Laboratory are also presented. (T.G.)

  8. Tracing time in the ocean: Unraveling depositional and preservational timescales using compound-specific radiocarbon analysis of biomarkers from marine sediments

    OpenAIRE

    Kusch, Stephanie

    2010-01-01

    Carbon cycle dynamics between the different inorganic and organic carbon pools play an important role in controlling the atmospheric chemical composition, thus, regulating the Earth’s climate. Atmospheric CO2 is fixed into biomass by photosynthesis of terrestrial and marine primary producers. Until final burial in marine sediments, the biologically fixed carbon that escapes remineralisation undergoes exchange between various active carbon reservoirs. Until now, the timescales o...

  9. A New Sensitive GC-MS-based Method for Analysis of Dipicolinic Acid and Quantifying Bacterial Endospores in Deep Marine Subsurface Sediment

    Science.gov (United States)

    Fang, J.

    2015-12-01

    Marine sediments cover more than two-thirds of the Earth's surface and represent a major part of the deep biosphere. Microbial cells and microbial activity appear to be widespread in these sediments. Recently, we reported the isolation of gram-positive anaerobic spore-forming piezophilic bacteria and detection of bacterial endospores in marine subsurface sediment from the Shimokita coalbed, Japan. However, the modern molecular microbiological methods (e.g., DNA-based microbial detection techniques) cannot detect bacterial endospore, because endospores are impermeable and are not stained by fluorescence DNA dyes or by ribosomal RNA staining techniques such as catalysed reporter deposition fluorescence in situ hybridization. Thus, the total microbial cell abundance in the deep biosphere may has been globally underestimated. This emphasizes the need for a new cultivation independent approach for the quantification of bacterial endospores in the deep subsurface. Dipicolinic acid (DPA, pyridine-2,6-dicarboxylic acid) is a universal and specific component of bacterial endospores, representing 5-15wt% of the dry spore, and therefore is a useful indicator and quantifier of bacterial endospores and permits to estimate total spore numbers in the subsurface biosphere. We developed a sensitive analytical method to quantify DPA content in environmental samples using gas chromatography-mass spectrometry. The method is sensitive and more convenient in use than other traditional methods. We applied this method to analyzing sediment samples from the South China Sea (obtained from IODP Exp. 349) to determine the abundance of spore-forming bacteria in the deep marine subsurface sediment. Our results suggest that gram-positive, endospore-forming bacteria may be the "unseen majority" in the deep biosphere.

  10. Microalgal Photosynthesis and Spectral Scalar Irradiance in Coastal Marine-Sediments of Limfjorden, Denmark

    DEFF Research Database (Denmark)

    LASSEN, C.; PLOUG, H.; JØRGENSEN, BB

    1992-01-01

    (bacteriochlorophyll a). Infrared scalar irradiance reached 200% of incident light intensity at 0.0-0.3-mm depth and IR penetration was independent of the development of a cyanobacterial surface film. At high incident light intensity, 740 muEinst m-2 s-1, the photosynthetic efficiency at 1.0-mm depth was 10-fold...... higher than in the uppermost 0.0-0.6 mm of the sediment. The lower boundary of the euphotic zone (detectable gross photosynthesis) was at a mean light level of greater-than-or-equal-to 7.5 muEinst m-2 s-1.......Scalar irradiance and oxygenic photosynthesis were measured simultaneously at 100-mum spatial resolution by a fiber-optic scalar irradiance microsensor and an oxygen microelectrode spaced 120 mum apart. Marine microbial mats on sandy sediments along the coast of Limfjorden, Denmark, were dominated...

  11. Speedy instrumental decoding of the marine-sediment as an indicator of environment pollution (abstract)

    International Nuclear Information System (INIS)

    Rehana, I.; Ishfaq, M.M.

    1999-01-01

    Pedogenesis and drainage determine quantity and quality of material to be transported from the terrestrial ecosystem to aquatic ecosystem. Thus identification of controlling factors for the accumulation of certain elemental burden is important while, studying recent anthropogenic sources on soil and ground water elemental geochemistry. The continuous supply of organic and inorganic material in aquatic system such as lake, rivers and estuaries renders the sediment-water interface by marked chemical changes, resulting in steep gradients in physical, chemical and biological properties. Biogenic, authigenic and mineral particle which settle at the sediment surface accumulate to relatively high concentration and compared to their time in water column, have an appreciably long time in which to react mutually henceforth to the surrounding interacting forces. The particle flux in the ocean response to wind speed, aerosol deposition, nutrient level, carbon dioxide levels in the mixed layer, availability of the trace element such as Fe and volcanic emissions. Biochemical processes taking place in the deep ocean are coupled to the atmospheric processes via the particle flux in the ocean. As the oceanic flux, responds to the climatic and environmental forces, it has also a potential to detect and monitor, thus permitting the reconstruction of the global changes in the past. Thus, in spite of the fact that are distinct correlation between concentration and the distance of the sampling point from potential source such as industry, highway or municipal can not be established sediments from sea, lake, estuaries or river could be valuable tool to show spatial and temporal trends of metal contamination. Studies have been undertaken to construct a comprehensive scenario of environmental impact from marine pollution. Hence present work attempts to evaluate enrichment of various metals and cations in marine sediments from Japanese and Pakistan coastal areas. Concentration of Cr, Cu, Cd

  12. Petroleum hydrocarbon concentrations in marine sediments along Nagapattinam - Pondicherry coastal waters, Southeast coast of India.

    Science.gov (United States)

    Kamalakannan, K; Balakrishnan, S; Sampathkumar, P

    2017-04-15

    In this present study, petroleum hydrocarbons were statistically analyzed in three different coastal sediment cores viz., (N1, P1 and P2) from the Southeast coast of Tamil Nadu, India to examine the viability of PHCs. The significant positive relationship between mud (silt+clay+sand) and PHC unveiled that high specific surface of area of mud content raise the level of PHCs. Cluster analysis was used to discriminate the sediment samples based on their degree of contamination. The present study shows that instead of expensive and destructive PHC chemical methods, magnetic susceptibility is found to be a suitable, cheap and rapid method for detailed study of PHC in marine sediments. This baseline PHCs data can be used for regular ecological monitoring and effective management for the mining and tourism related activities in the coastal ecosystem. Copyright © 2017 The Authors. Published by Elsevier Ltd.. All rights reserved.

  13. Isolation of naphthalene-degrading bacteria from tropical marine sediments

    International Nuclear Information System (INIS)

    Zhuang, W.-Q.; Tay, J.-H.; Maszenan, A.M.; Tay, S.T.-L.

    2003-01-01

    Oil pollution is a major environmental concern in many countries, and this has led to a concerted effort in studying the feasibility of using oil-degrading bacteria for bioremediation. Although many oil-degrading bacteria have been isolated from different environments, environmental conditions can impose a selection pressure on the types of bacteria that can reside in a particular environment. This study reports the successful isolation of two indigenous naphthalene-degrading bacteria from oil-contaminated tropical marine sediments by enrichment culture. Strains MN-005 and MN-006 were characterized using an extensive range of biochemical tests. The 16S ribosomal deoxyribonucleic acid (rDNA) sequence analysis was also performed for the two strains. Their naphthalene degradation capabilities were determined using gas chromatography and DAPI counting of bacterial cells. Strains MN-005 and MN-006 are phenotypically and phylogenetically different from each other, and belong to the genera Staphylococcus and Micrococcus, respectively. Strains MN-005 and MN-006 has maximal specific growth rates (μ max ) of 0.082±0.008 and 0.30±0.02 per hour, respectively, and half-saturation constants (K s ) of 0.79±0.10 and 2.52±0.32 mg per litre, respectively. These physiological and growth studies are useful in assessing the potential of these indigenous isolates for in situ or ex situ naphthalene pollutant bioremediation in tropical marine environments. (author)

  14. 8. Danish meeting for marine researchers

    International Nuclear Information System (INIS)

    1994-01-01

    The publication comprises the programme for the 8th Danish meeting for marine researchers held in Odense (Denmark) on January 25th - 27th, 1994, and the abstracts of the papers that were presented at that meeting. Subjects covered are marine biology, sediments and sedimentation, fish, fishing and fishing regulation, marine processes and the monitoring of Danish straits. (AB)

  15. The 10. Danish marine research meeting

    International Nuclear Information System (INIS)

    1998-01-01

    The publication comprises the programme for the 10th Danish meeting for marine researchers held in Hirtshals (Denmark) on January 21 - 27, 1998, and the abstracts of the papers that were presented at that meeting. Subjects covered are marine biology, sediments and sedimentation, fish, fishing and fishing regulations, marine processes and the monitoring of Danish straits. (EG)

  16. Total dissolved atmospheric nitrogen deposition in the anoxic Cariaco basin

    Science.gov (United States)

    Rasse, R.; Pérez, T.; Giuliante, A.; Donoso, L.

    2018-04-01

    Atmospheric deposition of total dissolved nitrogen (TDN) is an important source of nitrogen for ocean primary productivity that has increased since the industrial revolution. Thus, understanding its role in the ocean nitrogen cycle will help assess recent changes in ocean biogeochemistry. In the anoxic Cariaco basin, the place of the CARIACO Ocean Time-Series Program, the influence of atmospherically-deposited TDN on marine biogeochemistry is unknown. In this study, we measured atmospheric TDN concentrations as dissolved organic (DON) and inorganic (DIN) nitrogen (TDN = DIN + DON) in atmospheric suspended particles and wet deposition samples at the northeast of the basin during periods of the wet (August-September 2008) and dry (March-April 2009) seasons. We evaluated the potential anthropogenic N influences by measuring wind velocity and direction, size-fractionated suspended particles, chemical traces and by performing back trajectories. We found DIN and DON concentration values that ranged between 0.11 and 0.58 μg-N m-3 and 0.11-0.56 μg-N m-3 in total suspended particles samples and between 0.08 and 0.54 mg-N l-1 and 0.02-1.3 mg-N l-1 in wet deposition samples, respectively. Continental air masses increased DON and DIN concentrations in atmospheric suspended particles during the wet season. We estimate an annual TDN atmospheric deposition (wet + particles) of 3.6 × 103 ton-N year-1 and concluded that: 1) Atmospheric supply of TDN plays a key role in the C and N budget of the basin because replaces a fraction of the C (20% by induced primary production) and N (40%) removed by sediment burial, 2) present anthropogenic N could contribute to 30% of TDN atmospheric deposition in the basin, and 3) reduced DON (gas + particles) should be a significant component of bulk N deposition.

  17. Study of radionuclide and element characterization of Angola marine sediment using low background gamma spectrometry and instrumental neutron activation analysis techniques

    International Nuclear Information System (INIS)

    Teixeira, M.C.P.; Vuong Huu Tan; Truong Y; Ho Manh Dung; Le Nhu Sieu; Cao Dong Vu; Nguyen Thanh Binh

    2007-01-01

    The concentrations of radionuclides and chemical elements in Angola marine sediment samples were determined by using low background gamma (LBG) spectrometry and instrumental neutron activation analysis (INAA). The combination of radionuclide and elemental concentration values yielded synergy in the validation of analytical data and identification of sediment sources modeled by multivariate factor analysis. Varimax rotation factor analysis based on the elemental concentrations revealed five sources contributed to the sediment composition, i.e. crustal, sea-salt, industrial, coal-related and Se-related sources. (author)

  18. Methymercury Formation in Marine and Freshwater Systems: Sediment Characteristics, Microbial Activity and SRB Phylogeny Control Formation Rates and Food-Chain Exposure

    Science.gov (United States)

    King, J. K.; Saunders, F. M.

    2004-05-01

    Mercury research in freshwater and marine systems suggests that sediment characteristics such as organic substrate, mercury speciation, and sulfate/sulfide concentrations influence availability of inorganic mercury for methylation. Similarly, sediment characteristics also influence sulfate-reducing bacterial (SRB) respiration as well as the presence/distribution of phylogenetic groups responsible for mercury methylation. Our work illustrates that the process of methylmercury formation in freshwater and marine systems are not dissimilar. Rather, the same geochemical parameters and SRB phylogenetic groups determine the propensity for methylmercury formation and are applicable in both fresh- and marine-water systems. The presentation will include our integration of sediment geochemical and microbial parameters affecting mercury methylation in specific freshwater and marine systems. Constructed wetlands planted with Schoenoplectus californicus and amended with gypsum (CaSO4) have demonstrated a capacity to remove inorganic mercury from industrial outfalls. However, bioaccumulation studies of periphyton, eastern mosquitofish (Gambusia holbrooki) and lake chubsucker (Erimyzon sucetta) were conducted in order to ascertain the availability of wetland-generated methylmercury to biota. Total mercury concentrations in mosquitofish from non-sulfate treated controls and the reference location were significantly lower than those from the low and high sulfate treatments while mean total mercury concentrations in lake chubsuckers were also significantly elevated in the high sulfate treatment compared to the low sulfate, control and reference populations. Methylmercury concentrations in periphyton also corresponded with mercury levels found in the tissue of the lake chubsuckers, and these findings fit well given the trophic levels identified for both species of fish. Overall, data from this study suggest that the initial use of gypsum to accelerate the maturity of a constructed

  19. Ether lipids of planktonic archae in the marine water column

    NARCIS (Netherlands)

    Sinninghe Damsté, J.S.; Hoefs, M.J.L.; Schouten, S.; King, L.L.; Wakeham, S.G.; Leeuw, J.W. de

    1997-01-01

    Acyclic and cyclic biphytanes derived from the membrane ether lipids of archaea were found in water column particulate and sedimentary organic matter from several oxic and anoxic marine environments. Compound-specific isotope analyses of the carbon skeletons suggest that planktonic archaea utilize

  20. Tsunami induced transportation of the coastal marine sediments to distant onshore regions: Some indications from foraminiferal and microbenthic studies of new Wandoor region (Andaman & Nicobar)

    Digital Repository Service at National Institute of Oceanography (India)

    Khare, N.; Chaturvedi, S.K.; Ingole, B.S.

    regions near New Wandoor (Andaman and Nicobar) suggested the areal extent of marine transgression due to tsunami waves on December 26, 2004. There is a need to investigate coastal marine sediments with multi-disciplinary approach to understnd impact...

  1. STUDY OF THE SEDIMENTATION TREND IN THE PROSPECTIVE AREA OF PORT OF MARINE CENTER, CIREBON BASED ON REMOTE SENSING DATA

    Directory of Open Access Journals (Sweden)

    Undang Hernawan

    2017-07-01

    Full Text Available A coastal zone is the interface between the land and water that influenced by both of them. Coastal dynamic is influenced by many factors from land and sea, such as sedimentation and current. In order to support marine facility, Marine Geological Institute of Indonesia (MGI plan to build a port. The prospective area is behind MGI office at Cirebon. This study use multi temporal remote sensing data in order to observe trend of coastline change around MGI. Based on the interpretation of the data, there are sedimentation around the MGI water and abrasion due to the presence of Kejawanan’s jetty and Kalijaga River. The result also shows that the current in this region is moving from southeast to northwest. The presence of the Kejawanan’s jetty stymies the movement of sediment. The sediment which is normally moving to the north of the jetty is then trapped on the south side of the structure, so that the sediment precipitates in this region and makes it as the active region of sedimentation and accretion. The presence mangrove conduces to support sedimentation speed and accretion at this region, because of his function as the catchment area. Abrasion occurs in the eastern part of MGI office at the Kalijaga river mouth within the bay. The Kalijaga River mouth is predicted to be the primary source of sedimentation in this area. The coastline change caused by sedimentation will be continuing as long as it is supplied by the sediment. The direction of the sedimentation is parallel to the jetty and it forms ellipsoid, with the sedimentation/accretion region is behind MGI office. The abrasion area is found in Kalijaga River mouth and a small area beside Kalijaga River. In order to build a port, we have to consider this sedimentation process. One of the alternatives to build the port is to make a quay pile model which gives way the current to pass through the other side of the port. Another alternative is to build the port as a pond model but

  2. Larval development ratio test with the calanoid copepod Acartia tonsa as a new bioassay to assess marine sediment quality.

    Science.gov (United States)

    Buttino, Isabella; Vitiello, Valentina; Macchia, Simona; Scuderi, Alice; Pellegrini, David

    2018-03-01

    The copepod Acartia tonsa was used as a model species to assess marine sediment quality. Acute and chronic bioassays, such as larval development ratio (LDR) and different end-points were evaluated. As a pelagic species, A. tonsa is mainly exposed to water-soluble toxicants and bioassays are commonly performed in seawater. However, an interaction among A. tonsa eggs and the first larval stages with marine sediments might occur in shallow water environments. Here we tested two different LDR protocols by incubating A. tonsa eggs in elutriates and sediments coming from two areas located in Tuscany Region (Central Italy): Livorno harbour and Viareggio coast. The end-points analyzed were larval mortality (LM) and development inhibition (DI) expressed as the percentage of copepods that completed the metamorphosis from nauplius to copepodite. Aims of this study were: i) to verify the suitability of A. tonsa copepod for the bioassay with sediment and ii) to compare the sensitivity of A. tonsa exposed to different matrices, such as water and sediment. A preliminary acute test was also performed. Acute tests showed the highest toxicity of Livorno's samples (two out of three) compared to Viareggio samples, for which no effect was observed. On the contrary, LDR tests with sediments and elutriates revealed some toxic effects also for Viareggio's samples. Results were discussed with regards to the chemical characterization of the samples. Our results indicated that different end-points were affected in A. tonsa, depending on the matrices to which the copepods were exposed and on the test used. Bioassays with elutriates and sediments are suggested and LDR test could help decision-makers to identify a more appropriate management of dredging materials. Copyright © 2017 Elsevier Inc. All rights reserved.

  3. Rare earth elements determination and distribution patterns in sediments of a polluted marine environment by instrumental neutron activation analysis

    International Nuclear Information System (INIS)

    Yusof, A.M.

    2001-01-01

    Results obtained from the analysis of sediment core samples taken from a fairly polluted marine environment were analyzed for the REE contents to determine the concentrations of La, Ce, Sm, Eu, Tb, Dy and Yb using instrumental neutron activation analysis. Core samples were divided into strata of between 2 to 3 cm intervals and prepared in the powdered form before irradiating them in a neutron flux of about 5.0 x 10 12 n x cm -2 x s -1 in a Triga Mark II reactor. Down-core concentration profiles of La, Ce, Sm, Eu, Tb, Dy and Yb in 3 core sediments from three sites are obtained. The shale-normalized REE pattern from each site was examined and later used to explain the history of sedimentation by natural processes such as shoreline erosion and weathering products deposited on the seabed and furnishing some baseline data and/or pollution trend occurring within the study area. The shale-normalized REE patterns also showed that LREE in the sediment samples exhibit enrichment relative to HREE particularly, La and Sm showing enrichment compared to the ratios in shale. REE concentrations of 124 μg/g at the surface of sediment collected at two of the three sites were found to decrease to 58 and 95 μg/g, respectively. This was of particular interest when it is used to explain the anomalies occurring in the marine sediment as a result of geochemical processes over a long period of time. Changes in concentrations from surface to bottom of the sediments ratioed to Sm concentrations and the correlation between concentrations of Sm and these elements were also investigated and correlation coefficients were calculated for all REEs and sites. Validation of the method used was done using a Soil-7 SRM. (author)

  4. Accumulation of heavy metals in sediments of marine environments along the southwest coast of India

    International Nuclear Information System (INIS)

    Manjunatha, B.R.; Yeats, P.A.; Smith, J.N.; Shankar, R.; Narayana, A.C.; Prakash, T.N.

    1999-01-01

    In order to estimate the rate of excessive sediment accumulation that causes navigational problems and the impacts of urban and industrial development on sediment quality, concentrations of Cu, Ni, Zn, Cr, Mn, Fe and Ca, and radioactivity levels of 210 Pb and 137 Cs have been measured in nineteen sediment cores from estuarine, lagoonal, marsh, backwater and inner shelf areas along the southwest coast of India. Sediment accumulation rates in estuarine, lagoonal, marshy areas of the Karnataka coast (ELMKC) and Cochin Backwaters (CBw) are three to six times higher than those in the adjacent inner shelf areas, consistent with the deposition of terrigenous sediments in the river-sea interaction zones. Hydrogen sulphide was detected in most of the samples; sediment colour varied from shades of gray to dark green. Sediments have lower elemental concentrations and element enrichment factors (EFs) particularly for redox sensitive elements such as Mn due to prevalence of reducing conditions in the sedimentary column. Sediments of ELMKC and CBw have a predominantly terrigenous source. They contain low Ca contents, characteristic of tropical river sediments. In contrast, a higher Ca content of inner shelf sediments off both Karnataka State (ISKS-1) and Kerala State (ISKS-2) implies the importance of additional sediment (CaCO 3 ) flux from the marine biota. Measured Cu, Ni and Zn concentrations are generally low, perhaps reflecting the pristine nature of sediments. However, higher concentrations of Cr at all stations and of Zn at CBw indicate the input of Cr enriched minerals like amphibole and pyroxene from the catchment as well as Zn from anthropogenic sources. Heavy metal accumulation rates are high in estuarine, lagoonal, marsh and backwater areas along the southwest coast of India. This is not only due to the proximity of sources, but also due to high sediment accumulation rates because of the reduction of river flow in river-sea interaction zones owing to particle

  5. Uptake of radioactivity by marine surface sediments collected in Ghazaouet, west coast of Algeria

    International Nuclear Information System (INIS)

    Noureddine, A.; Baggoura, B.; Hocini, N.; Boulahdid, M.

    1998-01-01

    Samples of surface marine sediments of different grain sizes collected in Ghazaouet, a small bay on the western coast of Algeria, have been examined to measure concentrations of natural and artificial gamma-emitting radionuclides. The aim of this study is to determine the level of radioactivity and its repartition in the sedimentary area. The samples analyzed by direct counting gamma spectrometry, showed relatively high activities for natural radioactivity and revealed measurable quantities of 137 Cs, ranging from 0.66-8.47 Bq kg -1 dry weight. In addition, some of the samples of different nature were sieved in different grain-sizes, to study the uptake of radioactivity. It is found that the sediments of less than 100 μm grain-size have the highest level of uptake of radioactivity

  6. Uptake of radioactivity by marine surface sediments collected in Ghazaouet, west coast of Algeria

    Energy Technology Data Exchange (ETDEWEB)

    Noureddine, A.; Baggoura, B. [Laboratoire d' Environnement, Centre de Radioprotection et de Surete (C.R.S.), Algiers (Algeria); Hocini, N. [Laboratoire de Sedimentologie, Centre de Developpement des Techniques Nucleaires (C.D.T.N.), Algiers (Algeria); Boulahdid, M. [Departement de la Pollution Chimique, Institut des Sciences de la Mer et de l' Amenagement du Littoral, Tipaza (Algeria)

    1998-12-01

    Samples of surface marine sediments of different grain sizes collected in Ghazaouet, a small bay on the western coast of Algeria, have been examined to measure concentrations of natural and artificial gamma-emitting radionuclides. The aim of this study is to determine the level of radioactivity and its repartition in the sedimentary area. The samples analyzed by direct counting gamma spectrometry, showed relatively high activities for natural radioactivity and revealed measurable quantities of {sup 137}Cs, ranging from 0.66-8.47 Bq kg{sup -1} dry weight. In addition, some of the samples of different nature were sieved in different grain-sizes, to study the uptake of radioactivity. It is found that the sediments of less than 100 {mu}m grain-size have the highest level of uptake of radioactivity.

  7. The fate of fixed nitrogen in marine sediments with low organic loading: an in situ study

    DEFF Research Database (Denmark)

    Bonaglia, Stefano; Hylén, Astrid; Rattray, Jane E.

    2017-01-01

    Given the increasing impacts of human activities on global nitrogen (N) cycle, investigations on N transformation processes in the marine environment have drastically increased in the last years. Benthic N cycling has mainly been studied in anthropogenically impacted estuaries and coasts, while its...... sediments worldwide (range 34–344 µmol N m−2 d−1). Anammox accounted for 18–26 % of the total N2 production. Absence of free hydrogen sulfide and low concentrations of dissolved iron in sediment pore waters suggested that denitrification and DNRA were driven by organic matter oxidation rather than...... chemolithotrophy. DNRA was as important as denitrification at a shallow, coastal station situated in the northern Bothnian Bay. At this pristine and fully oxygenated site, ammonium regeneration through DNRA contributed more than one third to the total dissolved nitrogen (TDN) diffusing from the sediment...

  8. Defining seascapes for marine unconsolidated shelf sediments in an eastern boundary upwelling region: The southern Benguela as a case study

    Science.gov (United States)

    Karenyi, Natasha; Sink, Kerry; Nel, Ronel

    2016-02-01

    Marine unconsolidated sediment habitats, the largest benthic ecosystem, are considered physically controlled ecosystems driven by a number of local physical processes. Depth and sediment type are recognised key drivers of these ecosystems. Seascape (i.e., marine landscape) habitat classifications are based solely on consistent geophysical features and provide an opportunity to define unconsolidated sediment habitats based on processes which may vary in distribution through space and time. This paper aimed to classify unconsolidated sediment seascapes and explore their diversity in an eastern boundary upwelling region at the macro-scale, using the South African west coast as a case study. Physical variables such as sediment grain size, depth and upwelling-related variables (i.e., maximum chlorophyll concentration, austral summer bottom oxygen concentration and sediment organic carbon content) were included in the analyses. These variables were directly measured through sampling, or collated from existing databases and the literature. These data were analysed using multivariate Cluster, Principal Components Ordination and SIMPER analyses (in PRIMER 6 + with PERMANOVA add-in package). There were four main findings; (i) eight seascapes were identified for the South African west coast based on depth, slope, sediment grain size and upwelling-related variables, (ii) three depth zones were distinguished (inner, middle and outer shelf), (iii) seascape diversity in the inner and middle shelves was greater than the outer shelf, and (iv) upwelling-related variables were responsible for the habitat diversity in both inner and middle shelves. This research demonstrates that the inclusion of productivity and its related variables, such as hypoxia and sedimentary organic carbon, in seascape classifications will enhance the ability to distinguish seascapes on continental shelves, where productivity is most variable.

  9. Marine gamma spectrometric survey

    International Nuclear Information System (INIS)

    Kostoglodov, V.V.

    1979-01-01

    Presented are theoretical problems physical and geochemical prerequisites and possibilities of practical application of the method of continuous submarine gamma-spectrometric survey and radiometric survey destined for rapid study of the surface layer of marine sediments. Shown is high efficiency and advantages of this method in comparison with traditional and widely spread in marine geology methods of bottom sediments investigation

  10. Distribution of naturally occurring radioactivity and 137Cs in the marine sediment of Farasan island, southern red sea, Saudi Arabia

    International Nuclear Information System (INIS)

    Al-zahrany, A. A.; Farouk, M. A.; Al-yousef, A. A.

    2012-01-01

    The present work is a part of a project dedicated to measure the marine radioactivity near the Saudi Arabian coast of the Red Sea and Arabian Gulf for establishing a marine radioactivity database, which includes necessary information on the background levels of both naturally occurring and man-made radionuclides in the marine environment. Farasan Islands is a group of 84 islands (archipelago), under the administration of the Kingdom of Saudi Arabia, in the Red Sea with its main island of Farasan, which is 50 km off the coast of Jazan City. The levels of natural radioactivity of 238 U, 235 U, 226 Ra, 232 Thand 40 K and man-made radionuclides such as 137 Cs in the grab sediment and water samples around Farasan Island have been measured using gamma-ray spectroscopy. The average activity concentrations of 238 U, 235 U, 226 Ra, 232 Th, 40 K and 137C s in the sediment samples were found to be 35.46, 1.75, 3.31, 0.92, 34.34 and 0.14 Bq kg -1 , respectively. (authors)

  11. Distribution of branched GDGTs in surface sediments from the Colville River, Alaska: Implications for the MBT'/CBT paleothermometer in Arctic marine sediments

    Science.gov (United States)

    Hanna, Andrea J. M.; Shanahan, Timothy M.; Allison, Mead A.

    2016-07-01

    Significant climate fluctuations in the Arctic over the recent past, and additional predicted future temperature changes, highlight the need for high-resolution Arctic paleoclimate records. Arctic coastal environments supplied with terrigenous sediment from Arctic rivers have the potential to provide annual to subdecadal resolution records of climate variability over the last few millennia. A potential tool for paleotemperature reconstructions in these marine sediments is the revised methylation index of branched tetraethers (MBT')/cyclization ratio of branched tetraethers (CBT) proxy based on branched glycerol dialkyl glycerol tetraethers (brGDGTs). In this study, we examine the source of brGDGTs in the Colville River, Alaska, and the adjacent Simpson Lagoon and reconstruct temperatures from Simpson Lagoon sediments to evaluate the applicability of this proxy in Arctic estuarine environments. The Colville catchment soils, fluvial sediments, and estuarine sediments contain statistically similar brGDGT distributions, indicating that the brGDGTs throughout the system are soil derived with little alteration from in situ brGDGT production in the river or coastal waters. Temperatures reconstructed from the MBT'/CBT indices for surface samples show good agreement with regional summer (June through September) temperatures, suggesting a seasonal bias in Arctic temperature reconstructions from the Colville system. In addition, we reconstruct paleotemperatures from an estuarine sediment core that spans the last 75 years, revealing an overall warming trend in the twentieth century that is consistent with trends observed in regional instrumental records. These results support the application of this brGDGT-based paleotemperature proxy for subdecadal-scale summer temperature reconstructions in Arctic estuaries containing organic material derived from sediment-laden, episodic rivers.

  12. HEAVY METAL AND ANTIBIOTIC RESISTANCE BACTERIA IN MARINE SEDIMENT OF PAHANG COASTAL WATER

    Directory of Open Access Journals (Sweden)

    Zaima Azira

    2018-01-01

    Full Text Available The presence of heavy metal and antibiotic resistance bacteria in the marine sediment may indicate heavy metal pollution and antibiotic abuse present in the environment. In this study, a total of 89 bacteria isolated from sediment collected in Teluk Chempedak and Pantai Batu Hitam of Pahang coastal water underwent heavy metal resistance test against Chromium, Cadmium, Nickel, Copper and Cobalt. Previously, these isolates were found to exhibit antibiotic resistance capabilities to at least 5 antibiotics tested. Heavy metal resistance pattern for isolates from Teluk Chempedak was in the form of Cr > Ni >Co >Cd = Cu while for isolates from Pantai Batu Hitam showed a pattern of Cr = Ni >Co >Cu >Cd. Further investigation on the identity of selected isolates that exhibited both antibiotic and heavy metals resistance capabilities using 16S rRNA gene sequences revealed isolates with closest similarities to Staphylococcus saprophyticus and Brevundimonas vesicularis..

  13. Geochemistry of sediments

    Digital Repository Service at National Institute of Oceanography (India)

    Nath, B.N.

    Considering the potential of elemental data in marine sediments as diagnostic tools of various geological and oceanographic processes, sediment geochemical data from the Indian Ocean region has been reviewed in this article. Emphasis is laid...

  14. Twenty two years of sewage sludge marine disposal monitoring in the Eastern Mediterranean Sea: Impact on sediment quality and infauna and the response to load reduction.

    Science.gov (United States)

    Kress, N; Shoham-Frider, E; Galil, B S

    2016-09-15

    Effects of sewage sludge disposal on sediments and infauna are presented in a unique long-term (22years) data set from the Eastern Mediterranean. While organic carbon (Corg) and metals affected sediment quality in an area which size varied seasonally, the infauna exhibited seasonal "boom and bust" cycle. Metal concentrations declined following load reduction. However, Corg did not decrease and infaunal abundance, closely related to Corg, varied with changes in environmental forcing. Mild winters affected the infaunal populations at the heavily impacted stations, due to anoxic conditions. Planned cessation of disposal is estimated to reduce Corg and metal concentrations to pre-discharge levels. Yet the resettling biota is expected to differ significantly from the pre-discharge one and consist in large part of Erythraean non indigenous species. Copyright © 2016 Elsevier Ltd. All rights reserved.

  15. Transport zonation limits coupled nitrification-denitrification in permeable sediments

    DEFF Research Database (Denmark)

    Kessler, Adam John; Glud, R.N.; Cardenas, M.B.

    2013-01-01

    - and N-15-N-2 gas. The measured two-dimensional profiles correlate with computational model simulations, showing a deep pool of N-2 gas forming, and being advected to the surface below ripple peaks. Further isotope pairing calculations on these data indicate that coupled nitrification......-denitrification is severely limited in permeable sediments because the flow and transport field limits interaction between oxic and anoxic pore water. The approach allowed for new detailed insight into subsurface denitrification zones in complex permeable sediments....

  16. Depth-related influences on biodegradation rates of phenanthrene in polluted marine sediments of Puget Sound, WA

    International Nuclear Information System (INIS)

    Tang, Yinjie J. . E-mail yjtang@lbl.gov; Carpenter, Shelly D.; Deming, Jody W.; Krieger-Brockett, Barbara

    2006-01-01

    A whole-core injection method was used to determine depth-related rates of microbial mineralization of 14 C-phenanthrene added to both contaminated and clean marine sediments of Puget Sound, WA. For 26-day incubations under micro-aerobic conditions, conversions of 14 C-phenanthrene to 14 CO 2 in heavily PAH-contaminated sediments from two sites in Eagle Harbor were much higher (up to 30%) than those in clean sediments from nearby Blakely Harbor ( 14 C-phenanthrene degradation rates in the surface sediment horizons (0-3 cm) were more rapid (2-3 times) than in the deeper sediment horizons examined (>6 cm), especially in the most PAH polluted EH9 site. Differences in mineralization were associated with properties of the sediments as a function of sediment depth, including grain-size distribution, PAH concentration, total organic matter and total bacterial abundance. When strictly anaerobic incubations (in N 2 /H 2 /CO 2 atmosphere) were used, the phenanthrene biodegradation rates at all sediment depths were two times slower than under micro-aerobic conditions, with methanogenesis observed after 24 days. The main rate-limiting factor for phenanthrene degradation under anaerobic conditions appeared to be the availability of suitable electron acceptors. Addition of calcium sulfate enhanced the first order rate coefficient (k 1 increased from 0.003 to 0.006 day -1 ), whereas addition of soluble nitrate, even at very low concentration ( 1 up to 0.11 day -1 )

  17. Radioactivity and metal concentrations in marine sediments associated with mining activities in Ierissos Gulf, North Aegean Sea, Greece.

    Science.gov (United States)

    Pappa, F K; Tsabaris, C; Ioannidou, A; Patiris, D L; Kaberi, H; Pashalidis, I; Eleftheriou, G; Androulakaki, E G; Vlastou, R

    2016-10-01

    Marine sediment samples were collected from Ierissos Gulf, N Aegean Sea, close to the coastal mining facilities. Measurements of radionuclide and metal concentrations, mineral composition and grain size distribution were performed. The concentrations of (226)Ra, (235)U and trace metals showed enhanced values in the port of Stratoni compared with those obtained near to Ierissos port. The dose rates received by marine biota were also calculated by the ERICA Assessment Tool and the results indicated no significant radiological risk. Copyright © 2016 Elsevier Ltd. All rights reserved.

  18. Diversity of Microbial Communities and Quantitative Chemodiversity in Layers of Marine Sediment Cores from a Causeway (Kaichu-Doro in Okinawa Island, Japan

    Directory of Open Access Journals (Sweden)

    Taha Soliman

    2017-12-01

    Full Text Available Microbial community diversity and chemodiversity were investigated in marine sediments adjacent to the Okinawan “Kaichu-Doro” Causeway, which was constructed 46 years ago to connect a group of four islands (Henza-jima, Miyagi-jima, Ikei-jima, Hamahiga-jima to the Okinawan main island. This causeway was not built on pilings, but by land reclamation; hence, it now acts as a long, thin peninsula. The construction of this causeway was previously shown to have influenced the surrounding marine ecosystem, causing ecosystem fragmentation and loss of water circulation. In this study, we collected sediment cores (n = 10 from five paired sites in 1 m water depths. Each pair of sites consisted of one site each on the immediate north and south sides of the causeway. Originally the members of each pair were much closer to each other (<150 m than to other pairs, but now the members of each pair are isolated by the causeway. Each core was 60–80 cm long and was divided into 15-cm layers. We examined the vertical diversity of microbial communities and chemical compounds to determine the correlation between chemodiversity and microbial communities among marine sediment cores and layers. Principal coordinate analyses (PCoA of detected compounds and of bacterial and archaeal operational taxonomic units (OTUs revealed that the north and south sides of the causeway are relatively isolated, with each side having unique microbial OTUs. Additionally, some bacterial families (e.g., Acidaminobacteraceae, Rhizobiaceae, and Xanthomonadaceae were found only on the south side of Kaichu-Doro. Interestingly, we found that the relative abundance of OTUs for some microbial families increased from top to bottom, but this was reversed in some other families. We conclude that the causeway has altered microbial community composition and metabolite profiles in marine sediments.

  19. Marine sediments as a radioactive pollution repository in the world

    International Nuclear Information System (INIS)

    Navarrete, J.M.; Mueller, G.; Zuniga, M.A.; Camacho, M.; Espinosa, G.; Golzarri, J.I.

    2014-01-01

    During a time period little longer than 60 years, it has been created a radioactive pollution background over the natural one, which started in 1945 and it has been growing up since then, due to several nuclear tests, minor nuclear reactors failure and four major accidents: Wind Scale, Three Mile Island, Chernobyl and Fukushima. This radioactive polluting background can be easily detected through 137 Cs fission product, which by the effect of wind, river currents and rain has been accumulated in marine sediments, mainly because sea represents about 80 % of earth's surface. Since energy demand has been growing up with no interruption during last two centuries, and nuclear energy seems to be the largest available source, it is very likely a great expansion of nuclear energy during twenty-first century. So, this paper presents results obtained in strategic points of the two large littorals in Mexico: Gulf and Pacific Ocean, as an attempt to establish there some figure to evaluate the present radioactive pollution. An adequate figure to do it, seems to be the quotient of activity per gram of 137 Cs in marine sediments (Bq 137 Cs/g), divided by activity per gram of 40 K natural radioactivity (Bq 40 K/g). When this result is multiplied by 100 the percentage of polluting radioactivity ( 137 Cs) related to natural radioactivity ( 40 K) is obtained. This percentage seems to be useful to evaluate the importance of radioactive pollution from 4 points of view: a) calculate the extent of already radioactive pollution present in the seas of world; b) avoid the panic in case of nuclear accidents, c) what will be the growing up rate in the future; d) if it is possible to keep one decreasing rate at same decaying rate of 137 Cs (t 1/2 = 30.07 years), since from 1945, starting time of radioactive pollution, it has decayed only about 2.2 half lives. (author)

  20. Non-destructive X-ray Computed Tomography (XCT) Analysis of Sediment Variance in Marine Cores

    Science.gov (United States)

    Oti, E.; Polyak, L. V.; Dipre, G.; Sawyer, D.; Cook, A.

    2015-12-01

    Benthic activity within marine sediments can alter the physical properties of the sediment as well as indicate nutrient flux and ocean temperatures. We examine burrowing features in sediment cores from the western Arctic Ocean collected during the 2005 Healy-Oden TransArctic Expedition (HOTRAX) and from the Gulf of Mexico Integrated Ocean Drilling Program (IODP) Expedition 308. While traditional methods for studying bioturbation require physical dissection of the cores, we assess burrowing using an X-ray computed tomography (XCT) scanner. XCT noninvasively images the sediment cores in three dimensions and produces density sensitive images suitable for quantitative analysis. XCT units are recorded as Hounsfield Units (HU), where -999 is air, 0 is water, and 4000-5000 would be a higher density mineral, such as pyrite. We rely on the fundamental assumption that sediments are deposited horizontally, and we analyze the variance over each flat-lying slice. The variance describes the spread of pixel values over a slice. When sediments are reworked, drawing higher and lower density matrix into a layer, the variance increases. Examples of this can be seen in two slices in core 19H-3A from Site U1324 of IODP Expedition 308. The first slice, located 165.6 meters below sea floor consists of relatively undisturbed sediment. Because of this, the majority of the sediment values fall between 1406 and 1497 HU, thus giving the slice a comparatively small variance of 819.7. The second slice, located 166.1 meters below sea floor, features a lower density sediment matrix disturbed by burrow tubes and the inclusion of a high density mineral. As a result, the Hounsfield Units have a larger variance of 1,197.5, which is a result of sediment matrix values that range from 1220 to 1260 HU, the high-density mineral value of 1920 HU and the burrow tubes that range from 1300 to 1410 HU. Analyzing this variance allows us to observe changes in the sediment matrix and more specifically capture

  1. Investigating arsenic speciation and mobilization in sediments with DGT and DET

    DEFF Research Database (Denmark)

    Bennett, William W.; Teasdale, Peter R.; Panther, Jared G.

    2012-01-01

    Mobilization of arsenic from freshwater and estuarine sediments during the transition from oxic to anoxic conditions was investigated using recently developed diffusive sampling techniques. Arsenic speciation and Fe(II) concentrations were measured at high resolution (1-3 mm) with in situ diffusi...

  2. Transfer of organic carbon through marine water columns to sediments – insights from stable and radiocarbon isotopes of lipid biomarkers

    OpenAIRE

    S. G. Wakeham; A. P. McNichol

    2014-01-01

    Compound-specific 13C and 14C compositions of diverse lipid biomarkers (fatty acids, alkenones, hydrocarbons, sterols and fatty alcohols) were measured in sinking particulate matter collected in sediment traps and from underlying surface sediments in the Black Sea, the Arabian Sea and the Ross Sea. The goal was to develop a multiparameter approach to constrain relative inputs of organic carbon (OC) from marine biomass, terrigenous vascular-plant and relict-kerogen sources. U...

  3. The Link between Microbial Diversity and Nitrogen Cycling in Marine Sediments Is Modulated by Macrofaunal Bioturbation.

    Science.gov (United States)

    Yazdani Foshtomi, Maryam; Braeckman, Ulrike; Derycke, Sofie; Sapp, Melanie; Van Gansbeke, Dirk; Sabbe, Koen; Willems, Anne; Vincx, Magda; Vanaverbeke, Jan

    2015-01-01

    The marine benthic nitrogen cycle is affected by both the presence and activity of macrofauna and the diversity of N-cycling microbes. However, integrated research simultaneously investigating macrofauna, microbes and N-cycling is lacking. We investigated spatio-temporal patterns in microbial community composition and diversity, macrofaunal abundance and their sediment reworking activity, and N-cycling in seven subtidal stations in the Southern North Sea. Our results indicated that bacteria (total and β-AOB) showed more spatio-temporal variation than archaea (total and AOA) as sedimentation of organic matter and the subsequent changes in the environment had a stronger impact on their community composition and diversity indices in our study area. However, spatio-temporal patterns of total bacterial and β-AOB communities were different and related to the availability of ammonium for the autotrophic β-AOB. Highest bacterial richness and diversity were observed in June at the timing of the phytoplankton bloom deposition, while richness of β-AOB as well as AOA peaked in September. Total archaeal community showed no temporal variation in diversity indices. Distance based linear models revealed that, independent from the effect of grain size and the quality and quantity of sediment organic matter, nitrification and N-mineralization were affected by respectively the diversity of metabolically active β-AOB and AOA, and the total bacteria, near the sediment-water interface. Separate models demonstrated a significant and independent effect of macrofaunal activities on community composition and richness of total bacteria, and diversity indices of metabolically active AOA. Diversity of β-AOB was significantly affected by macrofaunal abundance. Our results support the link between microbial biodiversity and ecosystem functioning in marine sediments, and provided broad correlative support for the hypothesis that this relationship is modulated by macrofaunal activity. We

  4. The Link between Microbial Diversity and Nitrogen Cycling in Marine Sediments Is Modulated by Macrofaunal Bioturbation.

    Directory of Open Access Journals (Sweden)

    Maryam Yazdani Foshtomi

    Full Text Available The marine benthic nitrogen cycle is affected by both the presence and activity of macrofauna and the diversity of N-cycling microbes. However, integrated research simultaneously investigating macrofauna, microbes and N-cycling is lacking. We investigated spatio-temporal patterns in microbial community composition and diversity, macrofaunal abundance and their sediment reworking activity, and N-cycling in seven subtidal stations in the Southern North Sea.Our results indicated that bacteria (total and β-AOB showed more spatio-temporal variation than archaea (total and AOA as sedimentation of organic matter and the subsequent changes in the environment had a stronger impact on their community composition and diversity indices in our study area. However, spatio-temporal patterns of total bacterial and β-AOB communities were different and related to the availability of ammonium for the autotrophic β-AOB. Highest bacterial richness and diversity were observed in June at the timing of the phytoplankton bloom deposition, while richness of β-AOB as well as AOA peaked in September. Total archaeal community showed no temporal variation in diversity indices.Distance based linear models revealed that, independent from the effect of grain size and the quality and quantity of sediment organic matter, nitrification and N-mineralization were affected by respectively the diversity of metabolically active β-AOB and AOA, and the total bacteria, near the sediment-water interface. Separate models demonstrated a significant and independent effect of macrofaunal activities on community composition and richness of total bacteria, and diversity indices of metabolically active AOA. Diversity of β-AOB was significantly affected by macrofaunal abundance. Our results support the link between microbial biodiversity and ecosystem functioning in marine sediments, and provided broad correlative support for the hypothesis that this relationship is modulated by macrofaunal

  5. Modelling the cohesive sediment transport in the marine environment: the case of Thermaikos Gulf

    Directory of Open Access Journals (Sweden)

    Y. N. Krestenitis

    2007-01-01

    Full Text Available The transport of fine-grained sediments in the marine environment entails risks of pollutant intrusions from substances absorbed onto the cohesive flocks' surface, gradually released to the aquatic field. These substances include nutrients such as nitrate, phosphate and silicate compounds from drainage from fertilization of adjacent cultivated areas that enter the coastal areas through rivers and streams, or trace metals as remainders from urban and industrial activities. As a consequence, knowledge on the motion and distribution of sediment particles coming from a given pollutant source is expected to provide the 'bulk' information on pollutant distribution, necessary for determining the region of influence of the source and to estimate probable trophic levels of the seawater and potential environmental risks. In that aim a numerical model has been developed to predict the fate of the sediments introduced to the marine environment from different pollution sources, such as river outflows, erosion of the seabed, aeolian transported material and drainage systems. The proposed three-dimensional mathematical model is based on the particle tracking method, according to which matter concentration is expressed by particles, each representing a particular amount of sedimentary mass, passively advected and dispersed by the currents. The processes affecting characteristics and propagation of sedimentary material in the marine environment, incorporated in the parameterization, apart from advection and dispersion, include cohesive sediment and near-bed processes. The movement of the particles along with variations in sedimentary characteristics and state, carried by each particle as personal information, are traced with time. Specifically, concerning transport processes, the local seawater velocity and the particle's settling control advection, whereas the random Brownian motion due to turbulence simulates turbulent diffusion. The

  6. Levels of Cd, Cu, Pb and V in marine sediments in the vicinity of the Single Buoy Moorings (SBM3) at Mina Al Fahal in the Sultanate of Oman.

    Science.gov (United States)

    Al-Husaini, Issa; Abdul-Wahab, Sabah; Ahamad, Rahmalan; Chan, Keziah

    2014-06-15

    Recently in the Sultanate of Oman, there has been a rapid surge of coastal developments. These developments cause metal contamination, which may affect the habitats and communities at and near the coastal region. As a result, a study was conducted to assess the level of metal contamination and its impact on the marine sediments in the vicinity of the Single Buoy Moorings 3 (SBM3) at Mina Al Fahal in the Sultanate of Oman. Marine subtidal sediment samples were collected from six different stations of the SBM3 for the period ranging from June 2009 to April 2010. These samples were then analyzed for their level and distribution of the heavy metals of cadmium (Cd), copper (Cu), lead (Pb) and vanadium (V). Overall, low concentrations of all four heavy metals were measured from the marine sediments, indicating that the marine at SBM3 is of good quality. Copyright © 2014 Elsevier Ltd. All rights reserved.

  7. Are Sediments a Source of Fukushima Radiocesium for Marine Fauna in Coastal Japan?

    Science.gov (United States)

    Wang, C.; Fisher, N. S.; Baumann, Z.

    2016-02-01

    The Fukushima nuclear power plant accident in 2011 resulted in the largest accidental release of artificial radionuclides into the world's oceans. Among the fission products released in large quantities, 137Cs has the greatest potential for long-term impacts on marine biota and human consumers of seafood. In particular, some species of bottom fish near Fukushima were very contaminated and had higher radiocesium (134Cs and 137Cs) levels than pelagic fish in the same area, sometimes exceeding Japanese safety limits >4 years after the accident. Benthic invertebrates, many being prey items for bottom fish, show the same slow decrease in radiocesium as sediments, suggesting that contaminated sediment could be a source of radiocesium for benthic fauna. We evaluated the binding of 137Cs to sediments (Kd found to be 44-60 ml g-1) and found that bioturbation by the polychaete Nereis succinea greatly increased the initial release rate of Cs to overlying seawater. We also assessed the bioavailability of dissolved and sediment-bound Cs for deposit-feeding polychaetes, and its subsequent transfer to crabs and fish, and measured the influence of water temperature on Cs accumulation in fish. Assimilation efficiency (AE) of ingested 137Cs ranged from 16% in polychaetes ingesting sediments to 79% in fish ingesting worms. Efflux rate constants ranged from 5% d-1 for killifish to 40% d-1 for polychaetes. Animal absorption and retention of dissolved 137Cs were also measured. These parameters are used to model radiocesium bioaccumulation and trophic transfer in benthic food chains. Our results are consistent with the idea that sediments can be an important source of Cs for benthic food chains and help explain why some species of bottom fish remained more contaminated than pelagic fish in Japanese coastal waters.

  8. Community structure, cellular rRNA content, and activity of sulfate-reducing bacteria in marine Arctic sediments

    DEFF Research Database (Denmark)

    Ravenschlag, K.; Sahm, K.; Knoblauch, C.

    2000-01-01

    The community structure of sulfate-reducing bacteria (SRB) of a marine Arctic sediment (Smeerenburg-fjorden, Svalbard) a-as characterized by both fluorescence in situ hybridization (FISH) and rRNA slot blot hybridization by using group- and genus-specific 16S rRNA-targeted oligonucleotide probes...... that FISH and rRNA slot blot hybridization gave comparable results. Furthermore, a combination of the two methods allowed us to calculate specific cellular rRNA contents with respect to localization in the sediment profile. The rRNA contents of Desulfosarcina-Desulfococcus cells were highest in the first 5...... mm of the sediment (0.9 and 1.4 fg, respectively) and decreased steeply with depth, indicating that maximal metabolic activity occurred close to the surface, Based on SRB cell numbers, cellular sulfate reduction rates were calculated. The rates were highest in the surface layer (0.14 fmol cell(-1...

  9. Study of phosphate release from Bogor botanical gardens’ sediment into pore water using diffusive gradient in thin film (DGT)

    Science.gov (United States)

    Tirta, A. P.; Saefumillah, A.; Foliatini

    2017-04-01

    Eutrophication is one of the environmental problems caused by the excessive nutrients in aquatic ecosystems. In most lakes, phosphate is a limiting nutrient for algae photosynthesis. Even though the concentration of phosphate from external loading into the water body has been reduced, eutrophication could still be occured due to internal mobilization of phosphate from the sediment pore water into the overlying water. Therefore, the released phosphate from sediments and their interaction in the pore water must be included in the monitoring of phosphate concentration in aquatic system. The released phosphate from sediment into pore water has been studied by DGT device with ferrihydrite as binding gel and N-N‧-methylenebisacrylamide as crosslinker. The results showed that DGT with 15% acrylamide; 0.1 % N-N‧-methylenebisacrylamide and ferrihydrite as binding gel was suitable for the measurement of the released phosphate from sediment into pore water. The result of the deployed DGT in oxic and anoxic conditions in seven days incubation showed the released phosphate process from the sediment into pore water was affected by incubation time and the existence of oxygen in the environment. The released phosphate from the sediment into pore water in anoxic condition has a higher value than oxic condition. The experimental results of the deployed DGT in natural sediment core at a depth of 1 to 15 cm from the surface of the water for 7 days showed that the sediment has a different phosphate mass profile based on depth. The concentration of phosphate tends to be increased with depth. The maximum CDGT of phosphate released in oxic and anoxic conditions at 7th day period of incubation are 29.23 μg/L at 14 cm depth and 30.19 μg/L at 8 cm depth, respectively.

  10. Reciprocal sedimentation and noncorrelative hiatuses in marine-paralic siliciclastics: Miocene outcrop evidence

    Energy Technology Data Exchange (ETDEWEB)

    Kidwell, S.M.

    1988-07-01

    Deepening-upward paralic sequences present within a thicker record of shallowing-upward shelf and nonmarine sequences in Miocene siliciclastics of Maryland provide rare stratigraphic evidence for (1) coastal trapping of sediment during marine transgression, with simultaneous starvation on the open shelf (recorded by condensed skeletal lags), and (2) reciprocal switching of depositional and nondepositional conditions during regression. It follows that the regressive disconformities that define hemicyclic coastal sequences are not laterally continuous with the transgressive disconformities and condensed lags that define open-shelf hemicyclic sequences, although they are commonly depicted or assumed as such. Nor are these disconformities age correlative: marine-to-nonmarine correlations that assume lateral continuity of small-scale sequences (1 to 10 m thick; seismic parasequences) will err by as much as one-half cycle, restricting the applicability of models of punctuated aggradational cycles. The stratigraphic anatomy of parasequences is most comparable to reciprocal patterns inherent in hierarchically larger scale sequences in passive margins, where subaerial unconformities and submarine condensed intervals have recently been biostratigraphically verified as offset in age.

  11. Ca Isotope Geochemistry in Marine Deep Sea Sediments of the Eastern Pacific

    Science.gov (United States)

    Wittke, A.; Gussone, N. C.; Derigs, D.; Schälling, M.; Teichert, B. M.

    2017-12-01

    Ca isotope ratio analysis (δ44/40Ca) is a powerful tool to investigate diagenetic reactions in marine sedimentary porewater systems, as it is sensitive to processes such as carbonate dissolution, precipitation, recrystallization, ion exchange and deep fluid sources, due to the isotopic difference between dissolved Ca and solid carbonate minerals (e.g. [1];[2]). We analyzed eight sediment cores of the (paleo-) Pacific equatorial age transect. Two sediment cores show decreasing Ca isotope profiles starting at the sediment/water interface with seawater-like values down to sediment-like values due to recrystallization and an increasing in the bottom part again to seawater-like values. The other studied cores show different degrees of flattening of this middle bulge. We interpret this pattern either as an effect of sediment composition and thickness, decreasing recrystallization rates and/or fluid flux or a combination of all of these factors at the respective sampling sites. Element concentration profiles and Sr-isotope variations on some of these sediment cores show a similar behavior, supporting our findings ([3]; [4]). Seawater influx at (inactive) seamounts is supposed to cause seawater-like values at the bottom of the sediment cores by fluids migrating through the oceanic basement (e.g. [5]). While [6] hypothesizes that two seamounts or bathymetric pits are connected, with a recharge and a discharge site [7] say that uptaken fluids could be released through the surrounding seafloor as well due to diffusive exchange with the underlying oceanic crust. Our Ca isotope results combined with a transport reaction model approach support the latter hypothesis. References: [1] Teichert B. M., Gussone N. and Torres M. E. (2009) [2] Ockert C., Gussone N., Kaufhold S. and Teichert B. (2013) [3] Pälike H., Lyle M., Nishi H., Raffi I., Gamage K. and Klaus A. (eds.) (2010) [4] Voigt J., Hathorne E. C., Frank M., Vollstaedt H. and Eisenhauer A. (2015) [5] Villinger H. W

  12. Multi-isotopic determination of plutonium (239Pu, 240Pu, 241Pu and 242Pu) in marine sediments using sector-field inductively coupled plasma mass spectrometry.

    Science.gov (United States)

    Donard, O F X; Bruneau, F; Moldovan, M; Garraud, H; Epov, V N; Boust, D

    2007-03-28

    Among the transuranic elements present in the environment, plutonium isotopes are mainly attached to particles, and therefore they present a great interest for the study and modelling of particle transport in the marine environment. Except in the close vicinity of industrial sources, plutonium concentration in marine sediments is very low (from 10(-4) ng kg(-1) for (241)Pu to 10 ng kg(-1) for (239)Pu), and therefore the measurement of (238)Pu, (239)Pu, (240)Pu, (241)Pu and (242)Pu in sediments at such concentration level requires the use of very sensitive techniques. Moreover, sediment matrix contains huge amounts of mineral species, uranium and organic substances that must be removed before the determination of plutonium isotopes. Hence, an efficient sample preparation step is necessary prior to analysis. Within this work, a chemical procedure for the extraction, purification and pre-concentration of plutonium from marine sediments prior to sector-field inductively coupled plasma mass spectrometry (SF-ICP-MS) analysis has been optimized. The analytical method developed yields a pre-concentrated solution of plutonium from which (238)U and (241)Am have been removed, and which is suitable for the direct and simultaneous measurement of (239)Pu, (240)Pu, (241)Pu and (242)Pu by SF-ICP-MS.

  13. Worldwide Interlaboratory Comparison on the Determination of Trace Elements in the IAEA-457 Marine Sediment Sample

    International Nuclear Information System (INIS)

    2016-01-01

    The primary goal of the IAEA Environment Laboratories is to assist Member States in the use of both stable and radioisotope analytical techniques to understand, monitor and protect the environment. In this context, the major impact of large coastal cities on marine ecosystems is an issue of primary concern for the IAEA and the IAEA Environment Laboratories. The marine pollution assessments required to understand such impacts depend on accurate knowledge of contaminant concentrations in various environmental compartments. Through the IAEA Environment Laboratories, the IAEA has been assisting national laboratories and regional laboratory networks since the early 1970s through the provision of a reference material programme for the analysis of radionuclides, trace elements and organic compounds in marine samples. Quality assurance and quality control are two fundamental requirements to ensure the reliability of analytical results. Data that are not based on adequate quality assurance and quality control can be erroneous, and their misuse can lead to poor environmental management decisions. In this regard, the IAEA has a long history of organizing interlaboratory studies, which have evolved to include an increasing array of potential contaminants in the marine environment. Relevant activities comprise global interlaboratory comparison, regional proficiency tests, the production of marine reference materials and the development of reference methods for trace elements and organic pollutants analysis in marine samples. This publication summarizes the results of the IAEA-457 interlaboratory comparison on the determination of trace elements in a marine sediment sample

  14. Nitrogen cycle feedbacks as a control on euxinia in the mid-Proterozoic ocean.

    Science.gov (United States)

    Boyle, R A; Clark, J R; Poulton, S W; Shields-Zhou, G; Canfield, D E; Lenton, T M

    2013-01-01

    Geochemical evidence invokes anoxic deep oceans until the terminal Neoproterozoic ~0.55 Ma, despite oxygenation of Earth's atmosphere nearly 2 Gyr earlier. Marine sediments from the intervening period suggest predominantly ferruginous (anoxic Fe(II)-rich) waters, interspersed with euxinia (anoxic H(2)S-rich conditions) along productive continental margins. Today, sustained biotic H(2)S production requires NO(3)(-) depletion because denitrifiers outcompete sulphate reducers. Thus, euxinia is rare, only occurring concurrently with (steady state) organic carbon availability when N(2)-fixers dominate the production in the photic zone. Here we use a simple box model of a generic Proterozoic coastal upwelling zone to show how these feedbacks caused the mid-Proterozoic ocean to exhibit a spatial/temporal separation between two states: photic zone NO(3)(-) with denitrification in lower anoxic waters, and N(2)-fixation-driven production overlying euxinia. Interchange between these states likely explains the varying H(2)S concentration implied by existing data, which persisted until the Neoproterozoic oxygenation event gave rise to modern marine biogeochemistry.

  15. The IAEA worldwide intercomparison exercises (1990-1997). Determination of trace elements in marine sediments and biological samples

    International Nuclear Information System (INIS)

    Coquery, M.; Carvalho, F.P.; Azemard, S.; Horvat, M.

    1999-01-01

    Four major worldwide intercomparison exercises for the determination of trace elements in various environmental matrices were completed by the IAEA Marine Environment Laboratory since 1990: SD-M-2/TM, deep sea marine sediment; IAEA-350, tuna fish homogenate; IAEA-356, contaminated coastal sediment and IAEA-140, sea plant (Fucus sp.). These intercomparison exercises aim at enabling individual laboratories to monitor their performance. The results of these exercises allowed us to make an overall evaluation of the quality of data provided for environmental assessment and to identify the trends of analytical performance in the determination of trace elements over the years. The number of participants in each exercise varied between 68 and 130, and permits statistical evaluation of the performance for a number of elements. For each intercomparison exercise, the performance of the participant laboratories was assessed by comparing reported results with established reference values calculating 'Z-scores'. The results show that for each sample matrix, the values reported by some laboratories were far from satisfactory in the earlier exercises, in particular for Cd, Cr and Pb. Nevertheless, over time, a general improvement of performance can clearly be seen for all elements. Moreover, there was a noticeable increase in the number of laboratories with good performance in the two most recent exercises, observed both for biological and for sediment matrices. However, the determination of trace elements such as Cd, Cr, Pb and Hg in low level environmental samples still remains a major challenge to the analysts. For this reason and in order to assess the current performance of laboratories for low environmental levels of contaminants, the future intercomparison exercises will concentrate on low level sediment and fish samples

  16. Biogeochemistry of (210)Pb and (210)Po in fresh waters and sediments. Doctoral thesis

    International Nuclear Information System (INIS)

    Benoit, G.

    1988-06-01

    The geochemical cycling of (210)Pb in a Massachusetts lake was studied. A mass balance for the epilimnion showed that (210)Pb inputs by precipitation were matched by outputs on settling particles, so direct uptake by bottom sediments was inconsequential. Below the epilimnion, vertical mixing was very low because of a steep temperature/density gradient, and this limited vertical transport. Anoxic conditions caused remobilization of iron and (210)Pb, which reprecipitated at the oxycline and returned to the bottom via settling. Below the zone of precipitation, (210)Pb and iron distributions resulted from constant release from anoxic sediments and dilution in the water column. Sediment (210)Pb distributions were caused by sedimentation and Fickian transport. The Fickian component was equal to the pore water diffusive flux. In pore waters, (210)Pb and (210)Po were 100 times greater that in overlying water and had steep concentration gradients, unlike Fe, Mn, S(-II), and alkalinity. (210)Pb partition coefficients decreased from 15000 to 1500 with depth controlled by sorption on iron oxides. Remobilization to the water column comes from a thin layer of iron-rich floc near the sediment/water interface. Deeper in the cores, diffusive transport can cause redistribution of (210)Pb to an extent that can affect (210)Pb dating

  17. Assessment of 238Pu and 239+240Pu, in marine sediments of the oceans Atlantic and Pacific of Guatemala

    International Nuclear Information System (INIS)

    Mendez Ochaita, L.

    2000-01-01

    In this investigation samples of marine sediments were taken from 14 places representatives of the oceans coast of Guatemala. For the assesment of 238 Pu and 239+240 Pu in sediments a radiochemical method was used to mineralize sediments and by ionic interchange it was separated from other elements, after that an electrodeposition of plutonium was made in metallic discs. The radioactivity of plutonium was measured by alpha spectrometry system and the alpha spectrums were obtained. The levels of plutonium are not higher than other countries that shown contamination. The contamination of isotope of 239+240 Pu is higher than 238 Pu and the contamination by two isotopes of plutonium is higher in the Atlantic than the Pacific ocean

  18. Management of Reflex Anoxic Seizures

    Directory of Open Access Journals (Sweden)

    J Gordon Millichap

    2013-10-01

    Full Text Available Investigators at the Roald Dahl EEG Unit, Alder Hey Children’s NHS Foundation, Liverpool, UK, review the definition, pathophysiology, clinical presentation, and management of reflex anoxic seizures (RAS in children.

  19. Metabolism of polychlorinated biphenyls by marine bacteria

    International Nuclear Information System (INIS)

    Carey, A.E.; Harvey, G.R.

    1978-01-01

    There have been no reports of laboratory studies of PCB metabolism by marine organisms. A few workers have analyzed marine animals for products of PCB metabolism. A search for hydroxylated PCBs in marine fish proved inconclusive. Phenolic metabolites of PCBs have been identified in seals and guillemot. PCBs that had been hydroxylated and excreted by marine organisms would most likely be found in the sediments, so in our laboratory we conducted a search for these compounds in marine sediments. Two kilograms of organic-rich surface sediment from Buzzards Bay, Massachusetts, were extracted. The phenolic fraction was isolated and analyzed by gas chromatography-mass spectrometry (GC-MS). Neither wide mass scans nor selected mass searches produced any evidence of hydroxylated PCB derivatives. It was felt that if any marine organisms were capable of metabolism of PCBs, some marine bacteria should have that capability. Thus a series of laboratory experiments was conducted to test this possibility. Reported here is the finding of PCB metabolism by marine bacteria in batch culture

  20. Assessing the potential of amino acid δ13C patterns as a carbon source tracer in marine sediments: effects of algal growth conditions and sedimentary diagenesis

    Science.gov (United States)

    Larsen, T.; Bach, L. T.; Salvatteci, R.; Wang, Y. V.; Andersen, N.; Ventura, M.; McCarthy, M. D.

    2015-01-01

    Burial of organic carbon in marine sediments has a profound influence in marine biogeochemical cycles, and provides a sink for greenhouse gases such as CO2 and CH4. However, tracing organic carbon from primary production sources as well as its transformations in the sediment record remains challenging. Here we examine a novel but growing tool for tracing biosynthetic origin of amino acid carbon skeletons, based on natural occurring stable carbon isotope patterns in individual amino acids (δ13CAA). We focus on two important aspects for δ13CAA utility in sedimentary paleoarchives: first, the fidelity of source diagnostic of algal δ13CAA patterns across different oceanographic growth conditions; and second, the ability of δ13CAA patterns to record the degree of subsequent microbial amino acid synthesis after sedimentary burial. Using the marine diatom Thalassiosira weissflogii, we tested under controlled conditions how δ13CAA patterns respond to changing environmental conditions, including light, salinity, temperature, and pH. Our findings show that while differing oceanic growth conditions can change macromolecular cellular composition, δ13CAA isotopic patterns remain largely invariant. These results underscore that δ13CAA patterns should accurately record biosynthetic sources across widely disparate oceanographic conditions. We also explored how δ13CAA patterns change as a function of age, total nitrogen and organic carbon content after burial, in a marine sediment core from a coastal upwelling area off Peru. Based on the four most informative amino acids for distinguishing between diatom and bacterial sources (i.e. isoleucine, lysine, leucine and tyrosine), bacterial derived amino acids ranged from 10-15% in the sediment layers from the last 5000 years to 35% during the last glacial period. The larger bacterial fractions in older sediments indicate that bacterial activity and amino acid resynthesis progressed, approximately as a function of sediment age, to

  1. Enhanced nitrogen removal from electroplating tail wastewater through two-staged anoxic-oxic (A/O) process.

    Science.gov (United States)

    Yan, Xinmei; Zhu, Chunyan; Huang, Bin; Yan, Qun; Zhang, Guangsheng

    2018-01-01

    Consisted of anaerobic (ANA), anoxic-1 (AN1), aerobic-1 (AE1), anoxic-2 (AN2), aerobic-2 (AE2) reactors and sediment tank, the two-staged A/O process was applied for depth treatment of electroplating tail wastewater with high electrical conductivity and large amounts of ammonia nitrogen. It was found that the NH 4 + -N and COD removal efficiencies reached 97.11% and 83.00%, respectively. Besides, the short-term salinity shock of the control, AE1 and AE2 indicated that AE1 and AE2 have better resistance to high salinity when the concentration of NaCl ranged from 1 to 10g/L. Meanwhile, it was found through high-throughput sequencing that bacteria genus Nitrosomonas, Nitrospira and Thauera, which are capable of nitrogen removal, were enriched in the two-staged A/O process. Moreover, both salt-tolerant bacteria and halophili bacteria were also found in the combined process. Therefore, microbial community within the two-staged A/O process could be acclimated to high electrical conductivity, and adapted for electroplating tail wastewater treatment. Copyright © 2017 Elsevier Ltd. All rights reserved.

  2. Intercomparison of radionuclide measurements in marine sediment sample IAEA-135

    Energy Technology Data Exchange (ETDEWEB)

    Ballestra, S; Gastaud, J; Lopez, J J; Parsi, P; Vas, D

    1993-08-01

    The results of an intercomparison exercise on a marine sediment from Irish Sea, IAEA-135, designed for the determination of artificial and natural radionuclides levels, are reported. The data from 151 laboratories representing 51 countries have been evaluated. The following are the recommended values, with confidence intervals, for {sup 40}K, {sup 60}Co, {sup 134}Cs, {sup 137}Cs, {sup 154}Eu, {sup 155}Eu, {sup 226}Ra, {sup 228}Ra, {sup 232}Th,{sup 238}Pu, {sup 239+240}Pu (Reference date: 1 January 1992). Information values for {sup 57}Co, {sup 90}Sr, {sup 106}Ru, {sup 125}Sb, {sup 210}Pb, {sup 210}Po, {sup 228}Th, {sup 230}Th, {sup 234}U, {sup 235}U, {sup 238}U and {sup 241}Am are also reported. All values are expressed in Bq kg{sup -1} dry weight. (author)

  3. Effects of oil dispersants on settling of marine sediment particles and particle-facilitated distribution and transport of oil components.

    Science.gov (United States)

    Cai, Zhengqing; Fu, Jie; Liu, Wen; Fu, Kunming; O'Reilly, S E; Zhao, Dongye

    2017-01-15

    This work investigated effects of three model oil dispersants (Corexit EC9527A, Corexit EC9500A and SPC1000) on settling of fine sediment particles and particle-facilitated distribution and transport of oil components in sediment-seawater systems. All three dispersants enhanced settling of sediment particles. The nonionic surfactants (Tween 80 and Tween 85) play key roles in promoting particle aggregation. Yet, the effects varied with environmental factors (pH, salinity, DOM, and temperature). Strongest dispersant effect was observed at neutral or alkaline pH and in salinity range of 0-3.5wt%. The presence of water accommodated oil and dispersed oil accelerated settling of the particles. Total petroleum hydrocarbons in the sediment phase were increased from 6.9% to 90.1% in the presence of Corexit EC9527A, and from 11.4% to 86.7% for PAHs. The information is useful for understanding roles of oil dispersants in formation of oil-sediment aggregates and in sediment-facilitated transport of oil and PAHs in marine eco-systems. Copyright © 2016 Elsevier Ltd. All rights reserved.

  4. Dating of sediments and determination of sedimentation rate. Proceedings

    Energy Technology Data Exchange (ETDEWEB)

    Illus, E [ed.

    1998-08-01

    The Second NKS (Nordic Nuclear Safety Research)/EKO-1 Seminar was held at the Finnish Centre for Radiation and Nuclear Safety (STUK) on April 2-3, 1997. The work of the NKS is based on 4-year programmes; the current programme having been planned for the years 1994-1997. The programme comprises 3 major fields, one of them being environmental effects (EKO). Under this umbrella there are 4 main projects. The EKO-1 project deals with marine radioecology, in particular bottom sediments and sediment processes. The programme of the second seminar consisted of 8 invited lecturers and 6 other scientific presentations. Dating of sediments and determination of sedimentation rate are important in all types of sedimentological study and model calculations of fluxes of substances in the aquatic environment. In many cases these tasks have been closely related to radioecological studies undertaken in marine and fresh water environments, because they are often based on measured depth profiles of certain natural or artificial radionuclides present in the sediments. During recent decades Pb-210 has proved to be very useful in dating of sediments, but some other radionuclides have also been successfully used, e.g. Pu-239,240, Am-241 and Cs-137. The difficulties existing and problems involved in dating of sediments, as well as solutions for resolving these problems are discussed in the presentations

  5. Dating of sediments and determination of sedimentation rate. Proceedings

    International Nuclear Information System (INIS)

    Illus, E.

    1998-01-01

    The Second NKS (Nordic Nuclear Safety Research)/EKO-1 Seminar was held at the Finnish Centre for Radiation and Nuclear Safety (STUK) on April 2-3, 1997. The work of the NKS is based on 4-year programmes; the current programme having been planned for the years 1994-1997. The programme comprises 3 major fields, one of them being environmental effects (EKO). Under this umbrella there are 4 main projects. The EKO-1 project deals with marine radioecology, in particular bottom sediments and sediment processes. The programme of the second seminar consisted of 8 invited lecturers and 6 other scientific presentations. Dating of sediments and determination of sedimentation rate are important in all types of sedimentological study and model calculations of fluxes of substances in the aquatic environment. In many cases these tasks have been closely related to radioecological studies undertaken in marine and fresh water environments, because they are often based on measured depth profiles of certain natural or artificial radionuclides present in the sediments. During recent decades Pb-210 has proved to be very useful in dating of sediments, but some other radionuclides have also been successfully used, e.g. Pu-239,240, Am-241 and Cs-137. The difficulties existing and problems involved in dating of sediments, as well as solutions for resolving these problems are discussed in the presentations

  6. Study of cadmium, lead and tin distribution in surface marine sediment samples from Ria de Arousa (NW of Spain)

    International Nuclear Information System (INIS)

    Barciela-Alonso, M.C.; Pazos-Capeans, P.; Regueira-Miguens, M.E.; Bermejo-Barrera, A.; Bermejo-Barrera, P.

    2004-01-01

    In this work a study of the Cd, Pb and Sn content in marine surface sediment from the Ria de Arousa has been realised. For this, 21 sediment samples were taken in triplicate, lyophilised and sieved, and the fraction -1 Cd, 26.5-91.3 μg g -1 Pb and 5.0-20.8 μg g -1 Sn. The highest concentrations of these metals are in the inner part of the Ria, near to the port and urban nucleus such as Vilagarcia or Rianxo, and decrease toward the mouth of the Ria

  7. Seasonal variations in production and consumption rates of dissolved organic carbon in an organic-rich coastal sediment

    Science.gov (United States)

    Alperin, M. J.; Albert, D. B.; Martens, C. S.

    1994-11-01

    Dissolved organic carbon (DOC) concentrations in anoxic marine sediments are controlled by at least three processes: (1) production of nonvolatile dissolved compounds, such as peptides and amino acids, soluble saccharides and fatty acids, via hydrolysis of particulate organic carbon (POC). (2) conversion of these compounds to volatile fatty acids and alcohols by fermentative bacteria. (3) consumption of volatile fatty acids and alcohols by terminal bacteria, such as sulfate reducers and methanogens. We monitored seasonal changes in concentration profiles of total DOC, nonacid-volatile (NAV) DOC and acid-volatile (AV) DOC in anoxic sediment from Cape Lookout Bight, North Carolina, USA, in order to investigate the factors that control seasonal variations in rates of hydrolysis, fermentation, and terminal metabolism. During the winter months, DOC concentrations increased continuously from 0.2 mM in the bottomwater to ~4 mM at a depth of 36 cm in the sediment column. During the summer, a large DOC maximum developed between 5 and 20 cm, with peak concentrations approaching 10 mM. The mid-depth summertime maximum was driven by increases in both NAV- and AV-DOC concentrations. Net NAV-DOC reaction rates were estimated by a diagenetic model applied to NAV-DOC concentration profiles. Depth-integrated production rates of NAV-DOC increased from February through July, suggesting that net rates of POC hydrolysis during this period are controlled by temperature. Net consumption of NAV-DOC during the late summer and early fall suggests reduced gross NAV-DOC production rates, presumably due to a decline in the availability of labile POC. A distinct subsurface peak in AV-DOC concentration developed during the late spring, when the sulfate depletion depth shoaled from 25 to 10 cm. We hypothesize that the AV-DOC maximum results from a decline in consumption by sulfate-reducing bacteria (due to sulfate limitation) and a lag in the development of an active population of methanogenic

  8. Assessment of the potential impact of the phosphate industry along the Syrian Coast by evaluating 210Po and 210Pb levels in sediment, seawater and selected marine organisms

    International Nuclear Information System (INIS)

    Al-Masri, S.; Mamish, S.

    2000-12-01

    Phosphate industry is considered to be one of the potential sources of natural radionuclides in Syrian environment. Most of the phosphate ore is exported in large quantities via one of the main Syrian ports (Tartous) situated on the east coast of the Mediterranean Sea (34 54 North , 35 52 East). The impact of the loading cargoes on the marine environment has been evaluated. 210 Po and 210 Pb in seawater, sediment and marine organisms have been determined. Results have shown a significant enhancement of these two radionuclides in sediment and surface water inside the port area. The highest 210 Po and 210 Pb concentrations observed in sediment were found to be 170 Bq.kg -1 and 64 Bq.kg -1 respectively. While, 210 Pb and 210 Po concentrations in surface water ranged from 5 to 20 m Bq.l -1 and 0.93 to 3.23 m Bq.l -1 . In addition, other naturally occurring radionuclides were also determined in the collected sediment samples and relatively higher values ( 226 Ra = 33.2 Bq.kg -1 and 234 Th = 88 Bq.kg -1 ) were observed for those samples collected from inside the port. However, the effect of loading cargoes on the near marine environment was found to be mainly related to wind direction where air particulate carrying radioactivity either being blown to lands or sea. Moreover, comparable values of 210 Po and 210 Pb for all marine organisms (algae, crab and fish) have been observed and it is not recommended to use these organisms for evaluating the effect of phosphate industry on marine environment. This is due to the fact that marine organisms accumulate 210 Po and 210 Pb in their body. Two core samples were also collected in order to investigate the history of pollution in the port. Results have shown a complex relation for unsupported 210 Pb with depth, where the constant supply dating method can not be applied. This is due to the fact that two sources for unsupported 210 Pb being observed in the port area; viz. radon gas and phosphate dust carrying radioactivity

  9. Northern Gulf Littoral Initiative (NGLI), Geology and Physical Properties of Marine Sediments in the N.E. Gulf of Mexico: Data Report

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The Northern Gulf Littoral Initiative (NGLI), Geology and Physical Properties of Marine Sediments in the N.E. gulf of Mexico: Data Report, was produced by the U.S....

  10. Manganese and iron geochemistry in sediments underlying the redox-stratified Fayetteville Green Lake

    Science.gov (United States)

    Herndon, Elizabeth M.; Havig, Jeff R.; Singer, David M.; McCormick, Michael L.; Kump, Lee R.

    2018-06-01

    Manganese and iron are redox-sensitive elements that yield clues about biogeochemistry and redox conditions both in modern environments and in the geologic past. Here, we investigated Mn and Fe-bearing minerals preserved in basin sediments underlying Fayetteville Green Lake, a redox-stratified lake that serves as a geochemical analogue for Paleoproterozoic oceans. Synchrotron-source microprobe techniques (μXRF, μXANES, and μXRD) and bulk geochemical analyses were used to examine the microscale distribution and speciation of Mn, Fe, and S as a function of depth in the top 48 cm of anoxic lake sediments. Manganese was primarily associated with calcite grains as a manganese-rich carbonate that precipitated in the chemocline of the water column and settled through the euxinic basin to collect in lake sediments. Iron was preserved in framboidal iron sulfides that precipitated in euxinic bottom waters and underwent transformation to pyrite and marcasite in the sediments. Previous studies attribute the formation of manganese-rich carbonates to the diagenetic alteration of manganese oxides deposited in basins underlying oxygenated water. Our study challenges this paradigm by providing evidence that Mn-bearing carbonates form in the water column and accumulate in sediments below anoxic waters. Consequently, manganoan carbonates preserved in the rock record do not necessarily denote the presence of oxygenated bottom waters in ocean basins.

  11. Geochemistry of deep-sea sediment cores from the Central Indian Ocean Basin

    Digital Repository Service at National Institute of Oceanography (India)

    Mudholkar, A.V.; Pattan, J.N.; Parthiban, G.

    , thought to be of diagenetic origin. Metals are suppliEd. by upward migration from a suboxic to anoxic zone at an intermediate depth of 12-35 cm below the sediment-water interface in all the cores. Buried maxima in transition metal concentration at depth...

  12. A First Look at Oxygen and Silicon Isotope Variations in Diatom Silica from a Pliocene Antarctic Marine Sediment Core

    Science.gov (United States)

    Abbott, T.; Dodd, J. P.; Hackett, H.; Scherer, R. P.

    2016-02-01

    Coupled oxygen (δ18O) and silicon (δ30Si) isotope variations in diatom silica (opal-A) are increasingly used as a proxy to reconstruct paleoenvironmental conditions (water temperatures, water mass mixing, nutrient cycling) in marine environments. Diatom silica is a particularly significant paleoenvironmental proxy in high latitude environments, such as the Southern Ocean, where diatom blooms are abundant and diatom frustules are well preserved in the sediment. The Andrill-1B (AND-1B) sediment core from the Ross Sea (Antarctica) preserves several Pliocene ( 4.5 Ma) age diatomite units. Here we present preliminary δ18O and δ30Si values for a diatomite subunit in the AND-1B sediment core. Initial isotope values for the AND-1B diatoms silica record relatively high variability (range δ18O: 36.3‰ to 39.9‰) that could be interpreted as large-scale changes in the water temperature and/or freshwater mixing in the Ross Sea; however, a significant concern with marine sediment of this age is isotope fractionation during diagenesis and the potential formation of opal-CT lepispheres. The effects of clay contamination on the diatom silica δ18O values have been addressed through sample purification and quantified through chemical and physical analyses of the diatom silica. The isotopic effects of opal-CT are not as clearly understood and more difficult to physically separate from the primary diatom silica. In order to better understand the isotope variations in the AND-1B diatoms, we also evaluated silicon and oxygen isotope fractionation during the transition from opal-A to opal-CT in a controlled laboratory experiment. Opal-A from cultured marine diatoms (Thalassiosira weissflogii) was subjected to elevated temperatures (150°C) in acid digestion vessels for 4 weeks to initiate opal-CT precipitation. Quantifying the effects of opal-CT formation on δ18O and δ30Si variations in biogenic silica improves our understanding of the use of diatom silica isotope values a

  13. Algoriphagus resistens sp. nov., isolated from marine sediment.

    Science.gov (United States)

    Han, Ji-Ru; Zhao, Jin-Xin; Wang, Zong-Jie; Chen, Guan-Jun; Du, Zong-Jun

    2017-05-01

    Strain NH1T, a pink-pigmented, facultatively anaerobic, heterotrophic, catalase-positive and oxidase-negative, Gram-stain-negative marine bacterium, was isolated from marine sediment on the coast of Weihai, China. Cells of strain NH1T were rod-shaped, 0.8-2.0 µm in length and 0.5-1.0 µm in width. The strain was able to grow at 13-37 °C, pH 5.5-8.5, in the presence of 0.0-8.0 % (w/v) NaCl. Optimal growth was observed at 28 °C, with 3.0 % (w/v) NaCl and pH 6.5-7.0. Nitrate was reduced. The G+C content of the DNA was 41.9 mol%. The major isoprenoid quinone was MK-7 and the main cellular fatty acids (>10 %) were summed feature 3 (33.6 %) comprising iso-C15 : 0 2-OH and/or C16 : 1ω7c, and iso-C15:0 (19.2%). The major polar lipids in strain NH1T were phosphatidylethanolamine, unidentified lipids, phospholipid and aminolipids. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain NH1T was highly related to the type strains of Algoriphagus antarcticus (97.87 % 16SrRNA gene sequence similarity) and Algoriphagus ratkowskyi (97.56 %). On basis of the phenotypic and phylogenetic data, strain NH1T should be classified as representing a novel species of the genus Algoriphagus, for which the name Algoriphagus resistens sp. nov. is proposed. The type strain is NH1T (=MCCC 1H00140T=KCTC 52228T).

  14. Potential Activity of Subglacial Microbiota Transported to Anoxic River Delta Sediments

    DEFF Research Database (Denmark)

    Cameron, Karen A.; Stibal, Marek; Olsen, Nikoline S.

    2017-01-01

    -related organisms. Later, a reduction in methane was observed to be paired with the depletion of sulphate, and we hypothesise that sulphate reduction out competed hydrogenotrophic methanogenesis. The structure and diversity of the original CO2/H2-amended incubation communities changed dramatically with a major......The Watson River drains a portion of the SW Greenland ice sheet, transporting microbial communities from subglacial environments to a delta at the head of Søndre Strømfjord. This study investigates the potential activity and community shifts of glacial microbiota deposited and buried under layers...... of sediments within the river delta. A long-term (12-month) incubation experiment was established using Watson River delta sediment under anaerobic conditions, with and without CO2/H2 enrichment. Within CO2/H2-amended incubations, sulphate depletion and a shift in the microbial community to a 52% predominance...

  15. Caesium-137 in Marine Sediments of the Eastern Mediterranean from the Pre-Chernobyl Age to the Present

    International Nuclear Information System (INIS)

    Florou, Heleny; Evangeliou, Nikolaos; Kritidis, Panagiotis

    2011-01-01

    Caesium-137 (half-life 30.2 years) was first introduced into the marine environment as a result of the atmospheric nuclear weapon testing during 1953-1963. The second and largest contamination was the fallout after the Chernobyl accident in April 1986. Since 1986 the radiological status of the Mediterranean has been changed. During 1986 the average deposition of 137 Cs from the fallout in the Aegean Sea has been estimated to be approximately 4 kBq m -2 , whereas the respective value for the Ionian Sea (the area of 24,300 km 2 along the coasts) was 2.5 kBq m -2 . The total caesium ( 137 Cs + 134 Cs) input from Chernobyl fallout has been estimated to be 2400 TBq for the Black Sea, 820 TBq for the Aegean Sea and 600 TBq in the Ionian Sea (60 TBq in the zone of 50 km across the coasts). Although, the residence time of 137 Cs in seawater is long, it has been observed that 137 Cs has reached the bottom sediments, as the remaining period is long enough if compared to the estimated sinking time for the Mediterranean environment. The Mediterranean Sea is a semi-enclosed marine area, exchanging water, salt, heat and other physicochemical properties through the strait of Gibraltar with the Atlantic Ocean.The basin is characterized by low precipitation and high evaporation, which causes accumulation of contaminants in seawater and sediment. Taking into account the topography,one could note the importance of the eastern part of the Mediterranean,since it comprises a continuous source of interregional input (Black Sea). However,the motive of determining 137 Cs in the Greek marine territory was basic research (pre-Chernobyl age) and monitoring reasons (after Chernobyl accident). Several Greek marine systems have been examined throughout these years and the results are evaluated in the present study.

  16. Photochemical synthesis of biomolecules under anoxic conditions

    Science.gov (United States)

    Folsome, C.; Brittain, A.; Zelko, M.

    1983-01-01

    The long-wavelength UV anoxic photosynthesis of uracil, various sugars (including deoxyribose and glycoaldehyde), amino acids, and other organic photoproducts is reported. The reactions were conducted in a mixture of water, calcium carbonate, hydrazine, and formaldehyde which were subjected to 24 hr or 72 hr radiation. Product yields were greatest when the hydrazine/formaldehyde ratio was one, and when the reactant concentrations were low. These data suggest that organic products can be formed in variety from those amounts of formaldehyde and hydazine precursors which are themselves formed under anoxic UV photochemical conditions.

  17. Tracking riverborne sediment and contaminants in Commencement Bay, Washington, using geochemical signatures

    Science.gov (United States)

    Takesue, Renee K.; Conn, Kathleen E.; Dinicola, Richard S.

    2017-09-29

    Large rivers carry terrestrial sediment, contaminants, and other materials to the coastal zone where they can affect marine biogeochemical cycles and ecosystems. This U.S. Geological Survey study combined river and marine sediment geochemistry and organic contaminant analyses to identify riverborne sediment and associated contaminants at shoreline sites in Commencement Bay, Puget Sound, Washington, that could be used by adult forage fish and other marine organisms. Geochemical signatures distinguished the fine fraction (contaminants were measured in surface sediment did not have measurable 7Be activities in that layer, so their contaminant assemblages were attributed to sources from previous years. Concentrations of organic contaminants (the most common of which were polycyclic aromatic hydrocarbons, polychlorinated biphenyls, and fecal sterols) were higher in the contaminants in marine rather than river sediment, indicates that riverborne sediment-bound contaminants are retained in shallow marine habitats of Commencement Bay. The retention of earlier inputs complicates efforts to identify recent inputs and sources. Understanding modern sources and fates of riverborne sediment and contaminants and their potential ecological impacts will therefore require a suite of targeted geochemical studies in such marine depositional environments.

  18. Microbial and viral-like rhodopsins present in coastal marine sediments from four polar and subpolar regions

    Energy Technology Data Exchange (ETDEWEB)

    López, José L.; Golemba, Marcelo; Hernández, Edgardo; Lozada, Mariana; Dionisi, Hebe; Jansson, Janet K.; Carroll, Jolynn; Lundgren, Leif; Sjöling, Sara; Mac Cormack, Walter P.; Sobecky, Patricia

    2016-11-03

    Rhodopsins are broadly distributed. In this work, we analyzed 23 metagenomes corresponding to marine sediment samples from four regions that share cold climate conditions (Norway; Sweden; Argentina and Antarctica). In order to investigate the genes evolution of viral rhodopsins, an initial set of 6224 bacterial rhodopsin sequences according to COG5524 were retrieved from the 23 metagenomes. After selection by the presence of transmembrane domains and alignment, 123 viral (51) and non-viral (72) sequences (>50 amino acids) were finally included in further analysis. Viral rhodopsin genes were homologs of Phaeocystis globosa virus and Organic lake Phycodnavirus. Non-viral microbial rhodopsin genes were ascribed to Bacteroidetes, Planctomycetes, Firmicutes, Actinobacteria, Cyanobacteria, Proteobacteria, Deinococcus-Thermus and Cryptophyta and Fungi. A rescreening using Blastp, using as queries the viral sequences previously described, retrieved 30 sequences (>100 amino acids). Phylogeographic analysis revealed a geographical clustering of the sequences affiliated to the viral group. This clustering was not observed for the microbial non-viral sequences. The phylogenetic reconstruction allowed us to propose the existence of a putative ancestor of viral rhodopsin genes related to Actinobacteria and Chloroflexi. This is the first report about the existence of a phylogeographic association of the viral rhodopsin sequences from marine sediments.

  19. Optimization of microwave-assisted extraction of hydrocarbons in marine sediments: comparison with the Soxhlet extraction method.

    Science.gov (United States)

    Vázquez Blanco, E; López Mahía, P; Muniategui Lorenzo, S; Prada Rodríguez, D; Fernández Fernández, E

    2000-02-01

    Microwave energy was applied to extract polycyclic aromatic hydrocarbons (PAHs) and linear aliphatic hydrocarbons (LAHs) from marine sediments. The influence of experimental conditions, such as different extracting solvents and mixtures, microwave power, irradiation time and number of samples extracted per run has been tested using real marine sediment samples; volume of the solvent, sample quantity and matrix effects were also evaluated. The yield of extracted compounds obtained by microwave irradiation was compared with that obtained using the traditional Soxhlet extraction. The best results were achieved with a mixture of acetone and hexane (1:1), and recoveries ranged from 92 to 106%. The extraction time is dependent on the irradiation power and the number of samples extracted per run, so when the irradiation power was set to 500 W, the extraction times varied from 6 min for 1 sample to 18 min for 8 samples. Analytical determinations were carried out by high-performance liquid chromatography (HPLC) with an ultraviolet-visible photodiode-array detector for PAHs and gas chromatography (GC) using a FID detector for LAHs. To test the accuracy of the microwave-assisted extraction (MAE) technique, optimized methodology was applied to the analysis of standard reference material (SRM 1941), obtaining acceptable results.

  20. Shallow water marine sediment bacterial community shifts along a natural CO2 gradient in the Mediterranean Sea off Vulcano, Italy.

    Science.gov (United States)

    Kerfahi, Dorsaf; Hall-Spencer, Jason M; Tripathi, Binu M; Milazzo, Marco; Lee, Junghoon; Adams, Jonathan M

    2014-05-01

    The effects of increasing atmospheric CO(2) on ocean ecosystems are a major environmental concern, as rapid shoaling of the carbonate saturation horizon is exposing vast areas of marine sediments to corrosive waters worldwide. Natural CO(2) gradients off Vulcano, Italy, have revealed profound ecosystem changes along rocky shore habitats as carbonate saturation levels decrease, but no investigations have yet been made of the sedimentary habitat. Here, we sampled the upper 2 cm of volcanic sand in three zones, ambient (median pCO(2) 419 μatm, minimum Ω(arag) 3.77), moderately CO(2)-enriched (median pCO(2) 592 μatm, minimum Ω(arag) 2.96), and highly CO(2)-enriched (median pCO(2) 1611 μatm, minimum Ω(arag) 0.35). We tested the hypothesis that increasing levels of seawater pCO(2) would cause significant shifts in sediment bacterial community composition, as shown recently in epilithic biofilms at the study site. In this study, 454 pyrosequencing of the V1 to V3 region of the 16S rRNA gene revealed a shift in community composition with increasing pCO(2). The relative abundances of most of the dominant genera were unaffected by the pCO(2) gradient, although there were significant differences for some 5 % of the genera present (viz. Georgenia, Lutibacter, Photobacterium, Acinetobacter, and Paenibacillus), and Shannon Diversity was greatest in sediments subject to long-term acidification (>100 years). Overall, this supports the view that globally increased ocean pCO(2) will be associated with changes in sediment bacterial community composition but that most of these organisms are resilient. However, further work is required to assess whether these results apply to other types of coastal sediments and whether the changes in relative abundance of bacterial taxa that we observed can significantly alter the biogeochemical functions of marine sediments.

  1. Marine Subsurface Microbial Communities Across a Hydrothermal Gradient in Okinawa Trough Sediments

    Science.gov (United States)

    Brandt, L. D.; Hser Wah Saw, J.; Ettema, T.; House, C. H.

    2015-12-01

    IODP Expedition 331 to the Okinawa backarc basin provided an opportunity to study the microbial stratigraphy within the sediments surrounding a hydrothermal vent. The Okinawa backarc basin is a sedimented region of the seafloor located on a continental margin, and also hosts a hydrothermal network within the subsurface. Site C0014 within the Iheya North hydrothermal field is located 450 m east of the active vent and has a surface temperature of 5°C with no evidence of hydrothermal alteration within the top 10 meters below sea floor (mbsf). Temperature increases with depth at an estimated rate of 3°C/m and transitions from non-hydrothermal margin sediments to a hydrothermally altered regime below 10 mbsf. In this study, we utilized deep 16S rRNA sequencing of DNA from IODP Expedition 331 Site C0014 sediment horizons in order to assess diversity throughout the sediment column as well as determine the potential limits of the biosphere. Analysis of the amplicon data shows a shift over 15 mbsf from a heterogeneous community of cosmopolitan marine subsurface taxa toward an archaeal-dominated community in the deepest horizons of the predicted biosphere. Notably, the phylum Chloroflexi represents a substantial taxon through most horizons, where it appears to be replaced below 10 mbsf by punctuations of thermophilic and methanotrophic Archaea and Miscellaneous Crenarchaeotic Group abundances. DNA from the aforementioned transition horizons was further analyzed using metagenomic sequencing. Preliminary taxonomic analysis of the metagenomic data agrees well with amplicon data in capturing the shift in relative abundance of Archaea increasing with depth. Additionally, reverse gyrase, a gene found exclusively in hyperthermophilic microorganisms, was recovered only in the metagenome of the deepest horizon. A BLAST search of this protein sequence against the GenBank non-redudnant protein database produced top hits with reverse gyrase from Thermococcus and Pyrococcus, which are

  2. Depth-related influences on biodegradation rates of phenanthrene in polluted marine sediments of Puget Sound, WA

    Energy Technology Data Exchange (ETDEWEB)

    Tang, Yinjie J. [Keasling Lab, Biophysics Division, Lawrence Berkeley National Laboratory, Biophysics Division, 717 Potter Street, Bldlg 977 MC 3224, Berkeley, CA 94720-3224 (United States)]. E-mail yjtang@lbl.gov; Carpenter, Shelly D. [School of Oceanography, University of Washington, Seattle, WA 98195 (United States); Deming, Jody W. [School of Oceanography, University of Washington, Seattle, WA 98195 (United States); Krieger-Brockett, Barbara [Department of Chemical Engineering, University of Washington, Seattle, WA 98195 (United States)

    2006-11-15

    A whole-core injection method was used to determine depth-related rates of microbial mineralization of {sup 14}C-phenanthrene added to both contaminated and clean marine sediments of Puget Sound, WA. For 26-day incubations under micro-aerobic conditions, conversions of {sup 14}C-phenanthrene to {sup 14}CO{sub 2} in heavily PAH-contaminated sediments from two sites in Eagle Harbor were much higher (up to 30%) than those in clean sediments from nearby Blakely Harbor (<3%). The averaged {sup 14}C-phenanthrene degradation rates in the surface sediment horizons (0-3 cm) were more rapid (2-3 times) than in the deeper sediment horizons examined (>6 cm), especially in the most PAH polluted EH9 site. Differences in mineralization were associated with properties of the sediments as a function of sediment depth, including grain-size distribution, PAH concentration, total organic matter and total bacterial abundance. When strictly anaerobic incubations (in N{sub 2}/H{sub 2}/CO{sub 2} atmosphere) were used, the phenanthrene biodegradation rates at all sediment depths were two times slower than under micro-aerobic conditions, with methanogenesis observed after 24 days. The main rate-limiting factor for phenanthrene degradation under anaerobic conditions appeared to be the availability of suitable electron acceptors. Addition of calcium sulfate enhanced the first order rate coefficient (k {sub 1} increased from 0.003 to 0.006 day{sup -1}), whereas addition of soluble nitrate, even at very low concentration (<0.5 mM), inhibited mineralization. Long-term storage of heavily polluted Eagle Harbor sediment as intact cores under micro-aerobic conditions also appeared to enhance anaerobic biodegradation rates (k {sub 1} up to 0.11 day{sup -1})

  3. Thermodynamic and kinetic control on anaerobic oxidation of methane in marine sediments

    DEFF Research Database (Denmark)

    Knab, Nina J.; Dale, Andrew W.; Lettmann, Karsten

    2008-01-01

    The free energy yield of microbial respiration reactions in anaerobic marine sediments must be sufficient to be conserved as biologically usable energy in the form of ATP. Anaerobic oxidation of methane (AOM) coupled to sulfate reduction (SRR) has a very low standard free energy yield of ΔG  = -33...... yield was rarely less than -20 kJ mol-1 and was mostly rather constant throughout this zone. The kinetic drive was highest at the lower part of the SMTZ, matching the occurrence of maximum AOM rates. The results show that the location of maximum AOM rates is determined by a combination of thermodynamic...... and kinetic drive, whereas the rate activity mainly depends on kinetic regulation....

  4. Hydrogen sulfide oxidation without oxygen - oxidation products and pathways

    International Nuclear Information System (INIS)

    Fossing, H.

    1992-01-01

    Hydrogen sulfide oxidation was studied in anoxic marine sediments-both in undisturbed sediment cores and in sediment slurries. The turn over of hydrogen sulfide was followed using 35 S-radiolabeled hydrogen sulfide which was injected into the sediment. However, isotope exchange reactions between the reduced sulfur compounds, in particular between elemental sulfur and hydrogen sulfide, influenced on the specific radioactivity of these pools. It was, therefore, not possible to measure the turn over rates of the reduced sulfur pools by the radiotracer technique but merely to use the radioisotope to demonstrate some of the oxidation products. Thiosulfate was one important intermediate in the anoxic oxidation of hydrogen sulfide and was continuously turned over by reduction, oxidation and disproportionation. The author discusses the importance of isotope exchange and also presents the results from experiments in which both 35 S-radiolabeled elemental sulfur, radiolabeled hydrogen sulfide and radiolabeled thiosulfate were used to study the intermediates in the oxidative pathways of the sulfur cycle

  5. Distribution of naturally occurring radioactivity and ¹³⁷Cs in the marine sediment of Farasan Island, southern Red Sea, Saudi Arabia.

    Science.gov (United States)

    Al-Zahrany, A A; Farouk, M A; Al-Yousef, A A

    2012-11-01

    The present work is a part of a project dedicated to measure the marine radioactivity near the Saudi Arabian coasts of the Red Sea and Arabian Gulf for establishing a marine radioactivity database, which includes necessary information on the background levels of both naturally occurring and man-made radionuclides in the marine environment. Farasan Islands is a group of 84 islands (archipelago), under the administration of the Kingdom of Saudi Arabia, in the Red Sea with its main island of Farasan, which is 50 km off the coast of Jazan City. The levels of natural radioactivity of (238)U, (235)U, (226)Ra, (232)Th and (40)K and man-made radionuclides such as (137)Cs in the grab sediment and water samples around Farasan Island have been measured using gamma-ray spectroscopy. The average activity concentrations of (238)U, (235)U, (226)Ra, (232)Th, (40)K and (137)Cs in the sediment samples were found to be 35.46, 1.75, 3.31, 0.92, 34.34 and 0.14 Bq kg(-1), respectively.

  6. Quantitative research for pollution levels in marine sediments of Ha Long Bay by nuclear technique

    International Nuclear Information System (INIS)

    Nguyen Quang Long; Tran Thi Tuyet Mai; Pham Ngoc Khai; Nguyen Trung Thanh; Nguyen Van Phuc; Doan Thuy Hau; Duong Van Thang; Ha Lan Anh; Vo Thi Anh; Nguyen Thi Thu Ha

    2013-01-01

    Under the theme of Quantitative study of pollution levels in marine sediments of Halong bay by nuclear techniques conducted from June 2011 to June 2013, the authors conducted monitoring, sediment samples collected in the bay below the sediment column at 8 locations, in which 7 columns located at the estuary near Tuan Chau Island and 1 column at the area near the harbor of Cam Pha. The column samples were taken to the laboratory, cut slices with a distance of 2 cm in the form of frozen and conduct tests of radioactive Pb-210 to determine the rate of sediment in the survey area. Evaluation results based on the method by determining 210 Pb, the sediment rate showed speed in the survey area ranged from 0.3 cm.a -1 to 1.2 cm.a -1 and an average of 1.0 cm.a -1 . The slices of sediment samples (110 samples) were analyzed heavy metals (KLN) and As elemental by ICP-MS method. These sediment sample also were analyzed for simultaneous determination of N and P and total organic carbon (TOC). Results showed that heavy metal concentrations and As is smaller than the value specified in the National Technical Regulation on Sediment Quality of Vietnam (QCVN), phosphorus concentration less than that can cause harmful effects, but the concentration of total nitrogen and organic carbon that may exceed be harmful as directed by Canadian standards (Persuad et al. 1992). The concentration data in the Halong bay sediment were processed by statistical software SPSS-18, results showed high correlation between the quality TOC, N, P, K and correlation the majority of KLN, this proves the origin of sediments is part of the natural soil components and parts (TOC, N, P, K) is due to the activity of human activity as well as by agricultural fertilizers. The average content of elements in sediments Halong be compared with other data published works of sediment Quang Ninh area, the results show the correlation figures are also high. However, the results of the analysis of KLN and As in Halong

  7. The Importance of Microbial Iron Sulfide Oxidation for Nitrate Depletion in Anoxic Danish Sediments

    DEFF Research Database (Denmark)

    Vaclavkova, Sarka; Jacobsen, Ole Stig; Jørgensen, Christian Juncher

    2014-01-01

    of organic carbon in the sediment. An apparent salinity limitation to MISON was observed in the most brackish environment. Addition of high surface area synthetically precipitated iron sulfide (FeS x ) to the aquifer sediment with the lowest natural FeS x reactivity increased both the relative fraction of NO......Nitrate (NO3 −) reduction processes are important for depleting the NO3 − load from agricultural source areas before the discharge water reaches surface waters or groundwater aquifers. In this study, we experimentally demonstrate the co-occurrence of microbial iron sulfide oxidation by NO3 − (MISON......) and other NO3 −-depleting processes in a range of contrasting sediment types: sandy groundwater aquifer, non-managed minerotrophic freshwater peat and two brackish muddy sediments. Approximately 1/3 of the net NO3 − reduction was caused by MISON in three of the four environments despite the presence...

  8. Enantioselective analysis of ibuprofen and its biotransformation products in water/sediment systems,

    DEFF Research Database (Denmark)

    Sundström, Maria; Escola, Monica; Radke, Michael

    2015-01-01

    of the sediments in the aquatic systems has neither been taken in account previously. In this study, four water-sediment systems were chosen according to anthropogenic exposure and sediment conditions. A low anthropogenic impact lake (Largen), a river receiving wastewater (Fyrisån) and two sediments (anoxic......As ibuprofen degrades enantioselectively in activated sludge, the same process is assumed to occur in surface lake-water and in river-water based biofilms. Yet, the effects of the wastewater inflow, containing non-racemic ibuprofen, into natural systems have never been studied. The role......-7 days in Tvären and B1 respectively. Largen sediments, not impacted by wastewater, degraded ibuprofen faster than Fyrisån sediments did. Yet, these two sediments sediments showed no significant difference with respect to the degradation rates of the ibuprofen enantiomers. A connection between wastewater...

  9. Feasibility studies for the treatment and reuse of contaminated marine sediments.

    Science.gov (United States)

    Bonomoa, L; Careghini, A; Dastoli, S; De Propris, L; Ferrari, G; Gabellini, M; Saponaro, S

    2009-07-01

    This paper presents preliminary results of laboratory tests aimed at evaluating the easibility of the remediation of marine sediments, which are polluted by mercury and petroleum hydrocarbons, dredged at the bay of Augusta (SR, Italy). The treatment is composed of two sequential steps: in the first, a cement-based granular material is produced (based on a high performance concrete approach); then, the volatile and the semi-volatile compounds in the granular material are removed by a thermal desorption step. Treated materials could be reused or put into caissons, according to their mechanical properties and environmental compatibility. The experiments were focused on evaluating the effect of the process parameter values on: (i) the evolution of cement hydration reactions, (ii) thermal desorption removal efficiencies, (iii) leaching behaviour of the treated material.

  10. Tracing the Paleo sulfate-methane transition zones and H2S seepage events in marine sediments: An application of C-S-Mo systematics

    Digital Repository Service at National Institute of Oceanography (India)

    Peketi, A; Mazumdar, A; Joshi, R.K.; Patil, D.J.; Srinivas, P.L.; Dayal, A

    Microbially mediated anaerobic oxidation of methane (AOM) coupled with sulfate consumption within the sulfate methane transition zone (SMTZ) in marine sediments is a widely recorded biogeochemical reaction and has profound influence...

  11. Geomagnetic modulation of the late Pleistocene cosmic-ray flux as determined by 10Be from Blake Outer Ridge marine sediments

    International Nuclear Information System (INIS)

    McHargue, L.R.; Donahue, D.; Damon, P.E.; Sonett, C.P.; Biddulph, D.; Burr, G.

    2000-01-01

    The cosmic-ray flux incident upon the Earth during the late Pleistocene, 20-60 kyr B.P., was studied by measuring the cosmogenic radionuclide 10 Be from a marine sediment core at site CH88-10P on the Blake Outer Ridge. The paleointensity of the geomagnetic field for this core was determined by various methods. The variance in the concentration of 10 Be in the authigenic fraction of the sediments from Blake Ridge closely correlates with the inverse of the variance in the paleointensity of the geomagnetic field. The 10 Be signal lags, up to 1000 years of sedimentation, the measured paleointensity of the sediments. In contrast, the data from several other elements, some climatically sensitive, and from beryllium show relationship neither to 10 Be nor to the paleomagnetic data. The relationship between 10 Be concentration and the dipole field intensity (M/M o ) as measured in the sediments is consistent with theoretical models

  12. Rare earth elements determination and distribution patterns in sediments of polluted marine environment by instrumental neutron activation analysis

    International Nuclear Information System (INIS)

    Akyil, S.; Yusof, A.M.; Wood, A.K.H.

    2001-01-01

    Results obtained from the analysis of sediment core samples taken from a fairly polluted marine environment were analyzed for the REE contents to determine the concentrations of La, Ce, Sm, Eu, Tb, Dy and Yb using instrumental neutron activation analysis. Core samples were divided into strata of between 2 to 3 cm intervals and prepared in the powdered form before irradiating them in a TRIGA Mk.II reactor. Down-core concentration profiles of La, Ce, Sm, Eu, Tb, Dy and Yb in 3 core sediments from three sites are obtained. The shale-normalized REE pattern from each site was examined and later used to explain the history of sedimentation by natural processes such as shoreline erosion and weathering products deposited on the seabed and furnishing some baseline data and/or pollution trend occurring within the study area

  13. Effects of conventional and biodegradable microplastics on a marine ecosystem engineer (Arenicola marina) and sediment nutrient cycling

    International Nuclear Information System (INIS)

    Green, Dannielle Senga; Boots, Bas; Sigwart, Julia; Jiang, Shan; Rocha, Carlos

    2016-01-01

    Effects of microplastic pollution on benthic organisms and ecosystem services provided by sedimentary habitats are largely unknown. An outdoor mesocosm experiment was done to realistically assess the effects of three different types of microplastic pollution (one biodegradable type; polylactic acid and two conventional types; polyethylene and polyvinylchloride) at increasing concentrations (0.02, 0.2 and 2% of wet sediment weight) on the health and biological activity of lugworms, Arenicola marina (Linnaeus, 1758), and on nitrogen cycling and primary productivity of the sediment they inhabit. After 31 days, A. marina produced less casts in sediments containing microplastics. Metabolic rates of A. marina increased, while microalgal biomass decreased at high concentrations, compared to sediments with low concentrations or without microplastics. Responses were strongest to polyvinylchloride, emphasising that different materials may have differential effects. Each material needs to be carefully evaluated in order to assess their risks as microplastic pollution. Overall, both conventional and biodegradable microplastics in sandy sediments can affect the health and behaviour of lugworms and directly or indirectly reduce primary productivity of these habitats. - Highlights: • Effects of conventional and biodegradable microplastics on lugworm habitats. • 0.2–2% microplastics (by weight) reduced microalgal biomass of sediment. • Biodegradable (PLA) and conventional (HDPE, PVC) microplastics had similar effects. • High doses (2% by sediment weight) of PVC altered metabolism of lugworms. • Microplastics altered burrowing activity of lugworms measured as casts. - Biodegradable and conventional microplastics altered activities of a key marine ecosystem engineer and reduced primary productivity of sandy sediments.

  14. Carotenoid determination in recent marine sediments - practical problems during sample preparation and HPLC analysis

    Directory of Open Access Journals (Sweden)

    Magdalena Krajewska

    2017-05-01

    Full Text Available An analytical procedure for the analysis of carotenoids in marine sediments rich in organic matter has been developed. Analysis of these compounds is difficult; the application of methods used by other authors required optimization for the samples studied here. The analytical procedure involved multiple ultrasound-assisted extraction with acetone followed by liquid-liquid extraction (acetone extract:benzene:water - 15:1:10 v/v/v and HPLC analysis. The influence of column temperature on pigment separation and the quantification method were investigated – a temperature of 5 °C was selected for the Lichrospher 100 RP-18e column. The pigments in the sediment extract were quantified using a method based on HPLC analysis (at 450 nm and spectrophotometric measurements (at 450 nm, and extinction coefficients were determined for standard solutions at this wavelength. It is very important to use the value of the extinction coefficient appropriate to the wavelength at which the detection of carotenoids was carried out.

  15. Organic Geochemistry and Rock-Eval Pyrolysis of Eocene fine Sediments, East Ketungau Basin, West Kalimantan

    Directory of Open Access Journals (Sweden)

    M.H. Hermiyanto Zajuli

    2014-06-01

    Full Text Available DOI: 10.17014/ijog.v6i2.119Indonesia contains many Paleogene and Neogene basins which some of them have been proven to be a very prolific producer of oil and gas. A study on the result of Rock-Eval pyrolysis and biomarker undertaken on the Eocene Mandai Group was able to assess hydrocarbon potential of the Paleogene fine sediments in the frontier basin, especially West Kalimantan area. East Ketungau Basin is located in the western Kalimantan, bounded with Melawi Basin by the Semitau High in the south and West Ketungau Basin in the west. The Mandai Group was deposited in the East Ketungau Basin during Eocene, consisting of sandstone and mudstone facies. Mudstone facies comprises shale, claystone, and coal. Seven samples of Eocene fine sediments collected from East Ketungau Basin were analyzed by Rock-Eval pyrolisis and three samples for biomarker to evaluate their hydrocarbon potential. The Rock-Eval pyrolisis result of Mandai Group shows that TOC value of this facies ranges from 0.34 % to 5.16 %, Potential Yield (PY between 0.06 and 4.78 mg HC/g rock, and Hydrogen Index (HI from 12 to 89. Based on that result, the fine sediments of Mandai Group are included into a gas prone source rock potential with poor to fair categories. Moreover Tmax values vary from 426o C to 451o C. The Eocene fine sediments of Mandai Group fall under kerogen type III. Based on Tmax and biomarker analyses, the maturity of the sediments is situated within immature to mature level. The fine sediments of Mandai Group were deposited in a terrestrial to marine environment under anoxic to sub-oxic condition.

  16. Inverse Relationship of Marine Aerosol and Dust in Antarctic Ice with Fine-Grained Sediment in the South Atlantic Ocean: Implications for Sea-Ice Coverage and Wind Strength

    Directory of Open Access Journals (Sweden)

    Sharon L. Kanfoush

    2012-03-01

    Full Text Available This research seeks to test the hypothesis that natural gamma radiation (NGR from Ocean Drilling Program Site 1094, which displays variability over the last glacial-interglacial cycle similar to dust in the Vostok ice core, reflects fine-grained terrigenous sediment delivered by eolian processes. Grain size was measured on 400 samples spanning 0–20 m in a composite core. Accumulation of the <63μ size fraction at Site 1094 and dust in Vostok exhibit a negative correlation, suggesting the fine sediments are not dominantly eolian. However the technique used for grain size measurements cannot distinguish between terrigenous and biogenous materials; therefore it is possible much fine-grained material is diatoms. An inverse correlation between fine sediments and NGR supports this interpretation, and implies terrigenous materials were at times diluted by microfossils from high biological productivity. Fine marine sediments correlate positively with temperature and negatively with marine aerosol Na+ in Vostok. One plausible explanation is extensive sea-ice of cold intervals steepened ocean-continent temperature gradients, intensified winds, and led to increased transport of dust and marine aerosol to Antarctica yet also reduced biological productivity at Site 1094. Such a reduction despite increases in NGR, potentially representing Fe-rich dust influx, would require light limitation or stratification associated with sea-ice.

  17. Ligand-enhanced electrokinetic remediation of metal-contaminated marine sediments with high acid buffering capacity.

    Science.gov (United States)

    Masi, Matteo; Iannelli, Renato; Losito, Gabriella

    2016-06-01

    The suitability of electrokinetic remediation for removing heavy metals from dredged marine sediments with high acid buffering capacity was investigated. Laboratory-scale electrokinetic remediation experiments were carried out by applying two different voltage gradients to the sediment (0.5 and 0.8 V/cm) while circulating water or two different chelating agents at the electrode compartments. Tap water, 0.1 M citric acid and 0.1 M ethylenediaminetetraacetic acid (EDTA) solutions were used respectively. The investigated metals were Zn, Pb, V, Ni and Cu. In the unenhanced experiment, the acid front could not propagate due to the high acid buffering capacity of the sediments; the production of OH(-) ions at the cathode resulted in a high-pH environment causing the precipitation of CaCO3 and metal hydroxides. The use of citric acid prevented the formation of precipitates, but solubilisation and mobilisation of metal species were not sufficiently achieved. Metal removal was relevant when EDTA was used as the conditioning agent, and the electric potential was raised up to 0.8 V/cm. EDTA led to the formation of negatively charged complexes with metals which migrated towards the anode compartment by electromigration. This result shows that metal removal from sediments with high acid buffering capacity may be achieved by enhancing the electrokinetic process by EDTA addition when the acidification of the medium is not economically and/or environmentally sustainable.

  18. Phosphorus dynamics in the Black Sea and Baltic Sea

    NARCIS (Netherlands)

    Dijkstra, N.|info:eu-repo/dai/nl/372617034

    2017-01-01

    The dynamics of the key nutrient phosphorus (P) in hypoxic and anoxic marine basins are still incompletely understood. This thesis focuses on the cycling of P in two of such basins: the Baltic Sea and the Black Sea. Water column particulates and sediments from the deep basin of the Black Sea were

  19. Radiochronology of marine sediments and its application to the knowledge of the process of environmental pollution in coastal Cuban ecosystems

    International Nuclear Information System (INIS)

    Alonso-Hernández, Carlos M.; Díaz-Asencio, Misael; Gómez-Batista, Miguel; Bolaños-Alvares, Yoelvis; Muñoz-Caravaca, Alain; Morera-Gómez, Yasser

    2016-01-01

    The results achieved in the implementation of the radiochronology of marine sediments for the reconstruction of databases and knowledge of the evolution of environmental pollution in four coastal ecosystems of national significance are presented in this paper Fluxes of selected heavy metals and persistent organic compounds are discussed for the Cienfuegos and Havana bays and Sagua and La Coloma estuaries. Finally, is showed the effectiveness of radiochronology of sediments as a useful tool for environmental management and knowledge of temporal processes of pollution in the aquatic environment. (author)

  20. Terrestrial P and Reactive N and Marine Productivity in the Late Devonian Appalachian Basin

    Science.gov (United States)

    Tuite, M. L.; Macko, S. A.

    2009-12-01

    A causal link between the Late Devonian emergence of forest ecosystems and episodic black shale deposition has been proposed by several authors. Most attribute increases in epicontinental basin productivity to elevated rates of terrestrial phosphorus weathering facilitated by the co-evolution of root systems and soils. Two reasons to suspect that an increase in the P weathering flux was not the primary cause of organic-rich shale deposition are as follows. First, most Late Devonian black shales were deposited during sea level transgressions, periods when riverine fluxes of sediment and mineral nutrients such as P to marine basins were diminished. Second, Late Devonian forests were restricted to warm, moist lowlands where P was sequestered in soils as inorganic, occluded forms. However, the export flux of reactive N from these forests to adjacent epeiric seas by riverine and atmospheric deposition was enhanced by the warm, wet climate and expanding areal extent of forests. Abundant terrestrial reactive N primed the marine eutrophication pump by extending the residence time of P in the photic zone, permitting extensive growth of primary biomass. The consequent flux of organic matter to the sea floor created anoxic bottom waters that, in turn, allowed for the remobilization of P into the water column. Based on abundance and isotopic analyses of organic and inorganic C, N, P, and S from terrestrial and marine environments within and adjacent to the Late Devonian Appalachian Basin, this latter scenario is supported.