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Sample records for annotinum ssp alpestre

  1. Acetylcholinesterase inhibitory activity of lycopodane-type alkaloids from the Icelandic Lycopodium annotinum ssp. alpestre

    DEFF Research Database (Denmark)

    Halldórsdóttir, Elsa Steinunn; Jaroszewski, Jerzy W; Olafsdottir, Elin Soffia

    The aim of this study was to investigate structures and acetylcholinesterase inhibitory activities of lycopodane-type alkaloids isolated from an Icelandic collection of Lycopodium annotinum ssp. alpestre. Ten alkaloids were isolated, including annotinine, annotine, lycodoline, lycoposerramine M...... determined. Conformation of acrifoline was characterized using NOESY spectroscopy and molecular modelling. The isolated alkaloids were evaluated for their in vitro inhibitory activity against acetylcholinesterase and butyrylcholinesterase. Ligand docking studies based on mutated 3D structure of Torpedo...... californica acetylcholinesterase provided rationale for low inhibitory activity of the isolated alkaloids as compared to huperzine A or B, which are potent acetylcholinesterase inhibitors belonging to the lycodine class. Based on the modelling studies the lycopodane-type alkaloids seem to fit well into the...

  2. Phyllotaxis diversity in Lycopodium clavatum L. and Lycopodium annotinum L.

    Directory of Open Access Journals (Sweden)

    Edyta Gola

    2014-02-01

    Full Text Available In shoots of Lycopodium microphyllous phyllotaxis is extremely diverse. 24 various patterns were found in anisotomous L. clavatum and "only" 11 in isotomous L. annotinum. Spiral patterns expressed by k:(k+1 parastichy numbers were present together with typically whorled k:k patterns. In both species k number was higher in plagiotropic shoots than in orthotropic. It was also higher in L. clavatum than in L. annotinum. In the first species phyllotactic spectrum was wider with many patterns almost equally frequent, whereas narrow spectrum of L. annotinum showed clear dominance of only one pattern. The patterns, which are the most frequent in other plants, such as Fibonacci or Lucas, were uncommon in studied Lycopodium species. Discontinuous phyllotactic transitions occurred typically in two locations on the shoot: just below the dichotomic branching or above the borders, that separate the annual increments of the axis. Transitions were moderately frequent occurring in more than 7% of developmentally independent shoot segments. Dichotomous branching, resulting in variable shoot diameter, seasonal fluctuations of growth as well as a small size of microphylls relative to the shoot circumference are proposed to be the main factors contributing to the high phyllotactic diversity in studied species.

  3. The dynamics of stiff clubmoss Lycopodium annotinum L. patches in clumps of trees left on the clear-cutting in pine forest Leucobryo-Pinetum

    OpenAIRE

    Bogdanowicz Monika; Śliwińska-Wyrzychowska Anna; Świercz Anna; Kiedrzyński Marcin

    2015-01-01

    Clumps of trees left on the clear-cuttings have an important role in protecting populations of endangered plant species against destruction during silviculture activities. The aim of this study is to describe the changes in the area of the Lycopodium annotinum patches. The area of L. annotinum patch in clump of trees, have been significantly reduced during 5 years after clear-cut. In the first year of the observations, the studied population occupied an area of 69.8 m2 whereas in 2012, it was...

  4. The dynamics of stiff clubmoss Lycopodium annotinum L. patches in clumps of trees left on the clear-cutting in pine forest Leucobryo-Pinetum

    Directory of Open Access Journals (Sweden)

    Bogdanowicz Monika

    2015-03-01

    Full Text Available Clumps of trees left on the clear-cuttings have an important role in protecting populations of endangered plant species against destruction during silviculture activities. The aim of this study is to describe the changes in the area of the Lycopodium annotinum patches. The area of L. annotinum patch in clump of trees, have been significantly reduced during 5 years after clear-cut. In the first year of the observations, the studied population occupied an area of 69.8 m2 whereas in 2012, it was only 37.5 m2. Most of the shoots were withered away on the south side of the clump. The probable reason was too strong insolation. Shoots that survived were located in the north part of the clump – shielded by young trees and shrubs layer. At this time, the control patch of L. annotinum located inside the forest increased its area. Before the clear-cuttings, the annual growth of vertical shoots of clubmoss was higher in the patch located in future tree clump. After the clear-cutting, growth of shoots in this patch was shorter than in patch located all the time inside the forests. The most effective growth was observed in the third studied patch located in the clear-cutting border. The explanation for this phenomenon could be the higher humidity of habitat on this site. Clumps of trees left after the clear-cutting contribute to the protection of endangered populations, but do not eliminate the significant microhabitat changes. The clubmoss patches located in moist habitats are more likely to survive even if they are partially exposed to the sunlight.

  5. Abietatrienes diterpenoids from Sagittaria montevidensis SSP Montevidensis

    Energy Technology Data Exchange (ETDEWEB)

    Tanaka, Clara M.A.; Radke, Vanessa S.C.O.; Silva, Cleuza C. da [Universidade Estadual de Maringa (UEM), PR (Brazil). Dept. de Quimica; Nakamura, Celso V. [Universidade Estadual de Maringa (UEM), PR (Brazil). Dept. de Analises Clinicas; Oliveira, Pollyanna L. de; Kato, Lucilia; Oliveira, Cecilia M.A. de [Universidade Federal de Goias (UFG), Goiania, GO (Brazil). Inst. de Quimica

    2010-07-01

    The antimicrobial properties of the hexane, hexane/EtOAc and methanol fractions of the fresh petioles of Sagittaria montevidensis ssp montevidensis (Alismataceae) were evaluated against fungi and Gram-negative and Gram-positive bacteria. A new abietatriene-type diterpenoid, 3beta,7alpha-dihydroxi-abieta-8,11,13-triene and the known 3beta-hydroxy-abieta-8,11,13-trien-7-one were isolated from the most active fraction tested and the structures of these compounds were elucidated by data including IR, EIMS, and 1D and 2D NMR spectra. (author)

  6. The Huygens Surface Science Package (SSP)

    Science.gov (United States)

    Zarnecki, John C.; Leese, Mark; Hathi, Brijen; SSP Consortium, The

    2015-04-01

    The Huygens Surface Science Package (SSP), one of the six instruments selected by ESA, was the only one whose prime purpose was to study the surface of Titan in-situ. Designed at a time when even the basic nature of the surface (i.e. solid ice or liquid hydrocarbons) was unknown, it consisted of 9 separate compact and relatively simple sensors designed to span all likely surface scenarios. The Huygens landing on a "dry lake bed" allowed some of the sensors to be fully exercised. The results and their subsequent interpretations will be presented as well as perspectives from nearly 25 years since the original instrument selection.

  7. School Teams up for SSP Functional Models

    Science.gov (United States)

    Pignolet, G.; Lallemand, R.; Celeste, A.; von Muldau, H.

    2002-01-01

    Space Solar Power systems appear increasingly as one of the major solutions to the upcoming global energy crisis, by collecting solar energy in space where this is most easy, and sending it by microwave beam to the surface of the planet, where the need for controlled energy is located. While fully operational systems are still decades away, the need for major development efforts is with us now. Yet, for many decision-makers and for most of the public, SSP often still sounds like science fiction. Six functional demonstration systems, based on the Japanese SPS-2000 concept, have been built as a result of a cooperation between France and Japan, and they are currently used extensively, in Japan, in Europe and in North America, for executive presentations as well as for public exhibitions. There is demand for more models, both for science museums and for use by energy dedicated groups, and a senior high school in La Reunion, France, has picked up the challenge to make the production of such models an integrated practical school project for pre-college students. In December 2001, the administration and the teachers of the school have evaluated the feasibility of the project and eventually taken the go decision for the school year 2002- 2003, when for education purposes a temporary "school business company" will be incorporated with the goal to study and manufacture a limited series of professional quality SSP demonstration models, and to sell them world- wide to institutions and advocacy groups concerned with energy problems and with the environment. The different sections of the school will act as the different services of an integrated business : based on the current existing models, the electronic section will redesign the energy management system and the microwave projector module, while the mechanical section of the school will adapt and re-conceive the whole packaging of the demonstrator. The French and foreign language sections will write up a technical manual for

  8. Etude chimique et biologique des huiles essentielles de Juniperus phoenicea ssp. lycia et Juniperus phoenicea ssp. turbinata du Maroc

    Directory of Open Access Journals (Sweden)

    Mansouri, N.

    2011-01-01

    Full Text Available Chemical and biological study of essential oils of Moroccan Juniperus phoenicea ssp. lycia and Juniperus phoenicea ssp. turbinata. The composition of the essential oils of the branches and berries of Juniperus phoenicea (Cupressaceae, J. phoenicea ssp. lycia (plain and J. phoenicea ssp. turbinata (mountain, obtained by hydrodistillation, collected from Morocco, was analyzed by GC and GC/MS. The yields of essential oils were varying in function of the subspecies and of the part of the plant studied. The essential oils of these tree species are largely dominated by α-pinene and may be an important source of this component of a great interest on the international market. The effectiveness of essential oils from branches of the subspecies lycia against fungi decay wood has also been emphasized.

  9. Chemical and Antibacterial Polymorphism of Juniperus oxycedrus ssp. oxycedrus and Juniperus oxycedrus ssp. macrocarpa (Cupressaceae) Leaf Essential Oils from Tunisia

    OpenAIRE

    Hnène Medini; Bruno Manongiu; Neffati Aicha; Leila Chekir-Ghedira; Fethia Harzalla - Skhiri; Med Larbi Khouja

    2013-01-01

    Essential oils from Juniperus oxycedrus L. have been used since antiquity for fragrance, flavoring, medicinal, antimicrobial, insecticidal, and cosmetic purposes. Several works studied the chemical composition of the essential oils of Juniperus oxycedrus leaves. The aim of this study is to investigate the chemotaxonomic relationships and antibacterial activity of two Tunisian subspecies: Juniperus oxycedrus ssp. oxycedrus (L. K.) Deb. and Juniperus oxycedrus ssp. macrocarpa (S. & m.) Ball. In...

  10. Helianthus annuus ssp. texanus has chloroplast DNA and nuclear ribosomal RNA genes of Helianthus debilis ssp. cucumerifolius.

    OpenAIRE

    Rieseberg, L H; Beckstrom-Sternberg, S.; Doan, K

    1990-01-01

    Heiser [Heiser, C. B. (1951) Evolution 5, 42-51] hypothesized that Helianthus annuus ssp. texanus was derived by the introduction of H. annuus into Texas and subsequent introgression of genes from Helianthus debilis ssp. cucumerifolius into H. annuus. Although often considered to be one of the best cases of introgression in plants, alternative hypotheses to introgression, such as convergence or the joint retention of the ancestral condition, could not be ruled out in the original study. To te...

  11. Identification of Independent Streptococcus gordonii SspA and SspB Functions in Coaggregation with Actinomyces naeslundii

    OpenAIRE

    Egland, Paul G.; Dû, Laurence D.; Kolenbrander, Paul E.

    2001-01-01

    The initial stages of dental plaque formation involve the adherence of early colonizing organisms such as Streptococcus gordonii and Actinomyces naeslundii to the saliva-coated tooth surface and to each other. The S. gordonii surface proteins SspA and SspB are known to play a role in adherence to salivary proteins and mediate coaggregation with other bacteria. Coaggregation is the adhesin receptor-mediated interaction between genetically distinct cell types and appears to be ubiquitous among ...

  12. Comparison of Staphopain A (ScpA) and B (SspB) precursor activation mechanisms reveals unique secretion kinetics of proSspB (Staphopain B), and a different interaction with its cognate Staphostatin, SspC.

    Science.gov (United States)

    Nickerson, Nicholas; Ip, Jessica; Passos, Daniel T; McGavin, Martin J

    2010-01-01

    The scpAB and sspABC operons of Staphylococcus aureus encode Staphopain cysteine proteases ScpA and SspB, and their respective Staphostatins ScpB and SspC, which are thought to protect against premature activation of Staphopain precursors during protein export. However, we found that the proSspB precursor was secreted and activated without detriment to S. aureus in the absence of SspC function. Our data indicate that this is feasible due to a restricted substrate specificity of mature SspB, a stable precursor structure and slow secretion kinetics. In contrast, mature ScpA had a broad substrate specificity, such that it was prone to autolytic degradation, but also was uniquely able to degrade elastin fibres. Modelling of proScpA relative to the proSspB structure identified several differences, which appear to optimize proScpA for autocatalytic activation, whereas proSspB is optimized for stability, and cannot initiate autocatalytic activation. Consequently, recombinant proSspB remained stable and unprocessed when retained in the cytoplasm of Escherichia coli, whereas proScpA initiated rapid autocatalytic activation, leading to capture of an activation intermediate by ScpB. We conclude that the status of sspBC in S. aureus, as paralogues of the ancestral scpAB genes, facilitated a different activation mechanism, a stable proSspB isoform and modified Staphostatin function. PMID:19943908

  13. Progeny of Eucalyptus globulus Labill ssp. Globulus

    Institute of Scientific and Technical Information of China (English)

    ZANGDao-qun; ZHANGChuan-hong; LUOJun-min; HUANGYong-xiang; ZHURen-gang

    2003-01-01

    The preliminary assessment of progeny test in a seed orchard of Eucalyptus globulus Labill.ssp.globulus at Yipinglang State Farm of Yunnan Province in China was conducted.The trial was composed of 21 replications,with 2 trees on each plot,15 plots in each incomplete block,and 18 incomplete blocks in each replication,laid out in a α-design of 270 open-pollinated families.The families were of three categories (natural populations,local land race and seed orchard).They were further subdivided into 11 regions.The data from an assessment of growth,stem form and other characteristics of the young trees after being planted 2 years were analyzed.Results are as follows:the different categories differed significantly in their growth,with the families from seed orchards being the best.Regions also differed significantly in their growth.The families from the regions of Westem Victoria,Eastern Victoria and all three seed orchards were better than others.The tamilies from Yunnan had the best frost tolerant and its survival was the highest.For growth,stem form and fungal tolerance,the families from Yunnan were similar to that from Southern Tasmania and Eastem Tasmania.Two-tree plots were strongly recommended over singletree plot designs for large-scale progeny trials.

  14. Risk analysis of Safety Service Patrol (SSP) systems in Virginia.

    Science.gov (United States)

    Dickey, Brett D; Santos, Joost R

    2011-12-01

    The transportation infrastructure is a vital backbone of any regional economy as it supports workforce mobility, tourism, and a host of socioeconomic activities. In this article, we specifically examine the incident management function of the transportation infrastructure. In many metropolitan regions, incident management is handled primarily by safety service patrols (SSPs), which monitor and resolve roadway incidents. In Virginia, SSP allocation across highway networks is based typically on average vehicle speeds and incident volumes. This article implements a probabilistic network model that partitions "business as usual" traffic flow with extreme-event scenarios. Results of simulated network scenarios reveal that flexible SSP configurations can improve incident resolution times relative to predetermined SSP assignments. PMID:21605149

  15. [Flavonoids of Artemisia campestris, ssp. glutinosa].

    Science.gov (United States)

    Hurabielle, M; Eberle, J; Paris, M

    1982-10-01

    Four flavanones (pinostrobin, pinocembrin, sakuranetin and naringenin), one dihydroflavonol (7-methyl aromadendrin) and one flavone (hispidulin) have been isolated from Artemisia campestris L. ssp. glutinosa Gay and identified by spectroscopic methods. Artemisia campestris L. sous-espèce glutinosa Gay est une Composée Anthémidée largement répandue sur les sables du littoral méditerranéean et abondante dans certaines régions d'Espagne et d'Italie. Dans le cadre d'une étude chimiotaxonomique du genre Artemisia Tourn., nous nous sommes intéressés à l'analyse des flavonoïdes, composés jamais décrits, à notre connaissance, dans cette espèce d' Artemisia. Les sommités fleuries d' Artemisia campestris sous-espèce glutinosa, séchées et pulvérisées, sont dégraissées à l'ether de pétrole et épuisées par le chloroforme. Le fractionnement de l'extrait chloroformique, par chromatographie sur colonne de silice, et la purification de certaines fractions conduisent à l'isolement de six génines flavoniques, à l'etat pur. L' étude des spectres UV, des spectres de masse et des spectres de RMN [1,2] et la comparaison avec des échantillons authentiques permettent de proposer, pour ces flavonoïdes, les structures de la pinostrobine [3], de la pinocembrine [4], de la sakuranétine, de la naringénine [5] (flavanones), de la méthyl-7-aromadendrine, [6, 7] (dihydroflavonol) et de l'hispiduline [8, 9] (flavone); quatre de ces génines sont méthylées. Parmi ces flavonoïdes, la pinostrobine n'a jamais été décrite, à notre connaissance, dans la famille des Composées; la pinocembrine, la sakuranétine et la naringénine ont déjà été signalées chez quelques Astéracées et Eupatoriées [10], et l'hispiduline dans la tribu des Anthémidées ( Santolina chamaecyparissus L.) [8]. Seule, la méthyl-7-aromadendrine semble décrite, à ce jour, dans le genre Artemisia Tourn. [7]. PMID:17396957

  16. Estudio etnobotánico, arquitectura foliar y anatomía vegetativa de Agastache mexicana ssp. mexicana y A. mexicana ssp. xolocotziana Etnobotany, leaf architecture, and vegetative anatomy of Agastache mexicana ssp. mexicana and A. mexicana ssp. xolocotziana

    OpenAIRE

    Magali A. Santillán-Ramírez; Ma. Edith López-Villafranco; Silvia Aguilar-Rodríguez; Abigail Aguilar-Contreras

    2008-01-01

    El presente trabajo incluye información etnobotánica, así como la arquitectura foliar y anatomía vegetativa de Agastache mexicana ssp. mexicana (toronjil morado) y A. mexicana ssp. xolocotziana (toronjil blanco), con la finalidad de que sean incluidas en la Farmacopea Herbolaria de los Estados Unidos Mexicanos (FHEUM) y que sus caracteres anatómicos se utilicen para validar la identidad del material vegetal en el control de calidad. El registro de la información etnobotánica se efectuó por me...

  17. Chemical and Antibacterial Polymorphism of Juniperus oxycedrus ssp. oxycedrus and Juniperus oxycedrus ssp. macrocarpa (Cupressaceae Leaf Essential Oils from Tunisia

    Directory of Open Access Journals (Sweden)

    Hnène Medini

    2013-01-01

    Full Text Available Essential oils from Juniperus oxycedrus L. have been used since antiquity for fragrance, flavoring, medicinal, antimicrobial, insecticidal, and cosmetic purposes. Several works studied the chemical composition of the essential oils of Juniperus oxycedrus leaves. The aim of this study is to investigate the chemotaxonomic relationships and antibacterial activity of two Tunisian subspecies: Juniperus oxycedrus ssp. oxycedrus (L. K. Deb. and Juniperus oxycedrus ssp. macrocarpa (S. & m. Ball. In addition, and for the first time, we reported the antibacterial activities of Tunisian J. oxycedrus ssp. macrocarpa and J. oxycedrus ssp. oxycedrus against four bacteria. Essential oils obtained by hydrodistillation were analysed by GC and GC/MS. Fifty-five constituents were identified. Thirty four major compounds were retained for the study of the chemical variability, and α-pinene, sylvestrene, p-cymene, and 13-epi-manoyl oxide were the main ones. The chemical principal components analysis (PCA identified three chemotypes. The study of the antibacterial activity showed that Escherichia coli was found to be extremely resistant (zone diameter 0 mm to all the oils tested, while Staphylococcus aureus was the most sensitive strain (zone diameter 13.5 mm and MIC ranged from 600 to 650 μg/mL.

  18. Estudio etnobotánico, arquitectura foliar y anatomía vegetativa de Agastache mexicana ssp. mexicana y A. mexicana ssp. xolocotziana Etnobotany, leaf architecture, and vegetative anatomy of Agastache mexicana ssp. mexicana and A. mexicana ssp. xolocotziana

    Directory of Open Access Journals (Sweden)

    Magali A. Santillán-Ramírez

    2008-12-01

    Full Text Available El presente trabajo incluye información etnobotánica, así como la arquitectura foliar y anatomía vegetativa de Agastache mexicana ssp. mexicana (toronjil morado y A. mexicana ssp. xolocotziana (toronjil blanco, con la finalidad de que sean incluidas en la Farmacopea Herbolaria de los Estados Unidos Mexicanos (FHEUM y que sus caracteres anatómicos se utilicen para validar la identidad del material vegetal en el control de calidad. El registro de la información etnobotánica se efectuó por medio de entrevistas semiestructuradas a pobladores del municipio de Temoaya, Estado de México, México. Para el estudio anatómico y arquitectura foliar, se elaboraron preparaciones semipermanentes y permanentes de tallos y hojas. Ambos toronjiles son utilizados por los habitantes de la zona de estudio como recurso terapéutico y de ornato; los distinguen por la forma de las hojas, el color de la flor y el aroma, pero no existen preferencias de uso entre ambos. La arquitectura foliar sigue el patrón acródromo de posición basal con un desarrollo imperfecto; las areolas muestran un desarrollo imperfecto con disposición al azar, con vénulas simples o ramificadas una vez y el margen con dientes cunonioides en ambas especies. Diferencias anatómicas se observan en el tallo y son los tricomas no glandulares uniseriados en mayor abundancia y las bandas de esclerénquima más desarrolladas los caracteres que distinguen a A. mexicana ssp. xolocotziana de A. mexicana ssp. mexicana.This work provides information on ethnobotany, leaf architecture and anatomy of Agastache mexicana ssp. mexicana (toronjil morado and A. mexicana ssp. xolocotziana (toronjil blanco, with the purpose that they will be included in the Pharmacopeia Herbolaria of the Estados Unidos Mexicanos (FHEUM and that their anatomical characters could be used to validate the identity of the botanical material in quality control. We gathered ethnobotanical information using semi

  19. Optimal second order diagonally implicit SSP Runge--Kutta methods

    OpenAIRE

    Kocsis, Tihamér A.; Németh, Adrián

    2014-01-01

    Optimal Strong Stability Preserving (SSP) Runge--Kutta methods has been widely investegated in the last decade and many open conjectures have been formulated. The iterated implicit midpoint rule has been observed numerically optimal in large classes of second order methods, and was proven to be optimal for some small cases, but no general proof was known so far to show its optimality. In this paper we show a new approach to analytically investigate this problem and determine the unique optima...

  20. Flavonoids from Ulex airensis and Ulex europaeus ssp. europaeus.

    Science.gov (United States)

    Máximo, Patrícia; Lourenço, Ana; Feio, Sónia Savluchinske; Roseiro, José Carlos

    2002-02-01

    From the dichloromethane extract of Ulex airensis three new isoflavonoids, ulexin C (1), ulexin D (2), and 7-O-methylisolupalbigenin (3), were isolated and characterized by spectroscopic methods. Ulexin D (2) was also identified from the dichloromethane extract of Ulex europaeus ssp. europaeus. Together with these new metabolites, 18 compounds of previously known structures were isolated and identified from both species. The antifungal activity of these compounds was tested against Cladosporium cucumerinum by a bioautographic TLC assay. PMID:11858751

  1. Some aspects of cultivation and utilization of waxy maize (Zea mays L. ssp. ceratina)

    OpenAIRE

    Agnieszka Klimek-Kopyra; Aleksander Szmigiel; Tadeusz Zając; Agnieszka Kidacka

    2012-01-01

    This paper is a review of available literature on Zea mays L.ssp.ceratina. It contains information on the origin, cul- tivation and utilization of waxy maize in the world and can be a contribution to the development of new research on maize cultivation and starch processing technology. Maize, as an old and economically important cereal, played an enormous role in the ancient civilisations of the New World. Among the maize subspecies compared, Z. mays ssp. indurata and Z. mays ssp. indenta...

  2. Identification of Functional Candidates amongst Hypothetical Proteins of Treponema pallidum ssp. pallidum

    OpenAIRE

    Naqvi, Ahmad Abu Turab; Shahbaaz, Mohd; Ahmad, Faizan; Hassan, Md. Imtaiyaz

    2015-01-01

    Syphilis is a globally occurring venereal disease, and its infection is propagated through sexual contact. The causative agent of syphilis, Treponema pallidum ssp. pallidum, a Gram-negative sphirochaete, is an obligate human parasite. Genome of T. pallidum ssp. pallidum SS14 strain (RefSeq NC_010741.1) encodes 1,027 proteins, of which 444 proteins are known as hypothetical proteins (HPs), i.e., proteins of unknown functions. Here, we performed functional annotation of HPs of T. pallidum ssp. ...

  3. PENGEMBANGAN SSP TEMATIK INTEGRATIF UNTUK MEMBANGUN KARAKTER KEJUJURAN DAN KEPEDULIAN SISWA SD KELAS II

    Directory of Open Access Journals (Sweden)

    Sri Hariyati Qodriyah

    2015-07-01

    Full Text Available Penelitian ini bertujuan untuk menghasilkan perangkat pembelajaran berupa SSP Tematik yang dapat mengembangkan karakter siswa kelas 2 sekolah dasar, meliputi karakter kejujuran dan kepedulian. Penelitian ini merupakan penelitian dan pengembangan yang terdiri dari tujuh tahap, yaitu studi pendahuluan, perencanaan, mengembangkan produk awal, uji coba awal, revisi produk utama, uji coba lapangan, dan revisi terhadap produk operasional. SSP yang dikembangkan dievaluasi oleh seorang ahli materi dan media untuk mengetahui validitasnya. Subjek uji coba berjumlah 90 siswa terdiri dari 23 siswa SD Sonosewu, Kasihan, Bantul, DIY sebagai subjek uji coba terbatas dan 33 siswa untuk kelas control dan 34 siswa untuk kelas eksperimen SD 1 Kadipiro, Kasihan, Bantul, DIY. Hasil penelitian ini berupa SSP yang meliputi: silabus, RPP, LKS, dan lembar penilaian. Hasil evaluasi dari ahli materi dan ahli media untuk menguji tingkat kevalidan SSP menyatakan bahwa SSP yang dikembangkan adalah valid dan berkategori “baik”. Hasil uji coba menunjukkan bahwa SSP yang dikembangkan dinyatakan layak serta memenuhi kriteria praktis dan efektif dalam mengembangkan karakter siswa. Pembelajaran dengan SSP yang dikembangkan mampu mengembangkan karakter kejujuran dan kepedulian. Kata Kunci: SSP, karakter jujur dan peduli   DEVELOPING THEMATIC INTEGRATIVE SSP FOR BUILDING THE CHARACTERS OF HONESTY AND CARE GRADE II STUDENT OF ELEMENTARY SCHOOL Abstract This study aims to produce integrated learning sets in the form of thematic SSP that can develop the characters of honesty and care of grade II students of elementary school. This was a research and development study consisting of seven steps, i.e. preliminary study, planning, preliminary product development, preliminary tryout, main product revision, field tryout, revision of operational product, operational product revision, and revision of the final product. The developed SSP was evaluated by a science subject expert to assess

  4. A validity study of the SSP-School Inclusion Questionnaire

    Directory of Open Access Journals (Sweden)

    DIANA DĂMEAN

    2012-12-01

    Full Text Available The paper is based on the results of a research that aimed to identify the factors influencing school inclusion among disadvantagedstudents. The main outcome of the research was the development of the SSP-School Inclusion Questionnaire, intended to: (1measure school inclusion levels among students; (2 identify students with significantly lower levels of school inclusion, whoneed to be included in intervention programs; and (3 measure the impact of intervention programs using subjective indicators(beneficiaries’ perception of school and teachers, feelings of safety in school, school performance. The questionnaire was completedby 480 vocational school students aged 15-19 from a large developed urban area (Cluj-Napoca in Romania. The purpose of theresearch was to test the validity and reliability of the instrument and to propose it to professionals working in education (schoolpsychologists, school counsellors etc. for efficient data collection and for measuring the impact of educational intervention.

  5. Preliminary phytochemical studies of the leaf extracts of Rhododendron arboreum Sm. ssp. nilagiricum (Zenker) Tagg

    Institute of Scientific and Technical Information of China (English)

    Solomon Kiruba; Mony Mahesh; Zachariah Miller Paul; Solomon Jeeva

    2012-01-01

    Objective: To examine the secondary metabolites present in the leaf extracts of Rhododendron arboreum Sm. ssp. nilagiricum (Zenker) Tagg. Methods: Phytochemical screening of the leaf extract was done to determine the phytochemical constituents in the various solvents studied.Results:nilagiricum (Zenker) Tagg. confirm the existence of secondary metabolites such as phenols, saponins and tannins. Conclusions: The study suggests that the leaf extracts of R. arboreum Sm. ssp. nilagiricum (Zenker) Tagg. can be best utilized in developing bioactive compounds against pathogenic infection. The phytochemical study carried out on the leaf extracts of R. arboreum Sm. ssp.

  6. Phytochemical analysis of the flower extracts of Rhododendron arboreum Sm. ssp. nilagiricum (Zenker) Tagg

    Institute of Scientific and Technical Information of China (English)

    Kiruba S; Mahesh M; Nisha SR; Miller Paul Z; Jeeva S

    2011-01-01

    Objective: To evaluate the preliminary phytochemical screening of the flower extracts of Rhododendron arboreum (R. arboreum) Sm. ssp. nilagiricum (Zenker) Tagg. Methods: The preliminary phytochemical screening was performed by the standard methods as described by Harborne. Results: The phytochemical analysis carried out on the flowers of R. arboreum Sm. ssp. nilagiricum (Zenker) Tagg showed the presence of phenols, saponins, steroids, tannin, xanthoprotein and coumarin. Conclusions:The present study suggested that the flower extracts of R. arboreum Sm. ssp. nilagiricum (Zenker) Tagg possess significant phytochemical constituents and it can be used as antimicrobial agents against clinically isolated pathogens.

  7. Bosom Buddies: The Symbiotic Relationship Between Infants and Bifidobacterium longum ssp. longum and ssp. infantis. Genetic and Probiotic Features.

    Science.gov (United States)

    Arboleya, Silvia; Stanton, Catherine; Ryan, C Anthony; Dempsey, Eugene; Ross, Paul R

    2016-01-01

    The intestinal microbiota is a complex community that plays an important role in human health from the initial steps of its establishment. Its microbial composition has been suggested to result from selective pressures imposed by the host and is modulated by competition among its members. Bifidobacterium longum is one of the most abundant species of the Bifidobacterium genus in the gut microbiota of healthy breast-fed infants and adults. The recent advancements of 'omics techniques have facilitated the genetic and functional studies of different gut microbiota members. They have revealed the complex genetic pathways used to metabolize different compounds that likely contribute to the competitiveness and persistence of B. longum in the colon. The discovery of a genomic island in B. longum ssp. infantis that encodes specific enzymes for the metabolism of human milk oligosaccharides suggests a specific ecological adaptation. Moreover, B. longum is widely used as probiotic, and beneficial effects in infant health have been reported in several studies. PMID:26934170

  8. An abstract class loader for the SSP and its implementation in TL.

    Energy Technology Data Exchange (ETDEWEB)

    Wickstrom, Gregory Lloyd; Winter, Victor Lono (University of Nebraska at Omaha, Omaha, NE); Fraij, Fares (University of Texas at El Paso, El Paso, TX); Roach, Steve (University of Texas at El Paso, El Paso, TX); Beranek, Jason (University of Nebraska at Omaha, Omaha, NE)

    2004-08-01

    The SSP is a hardware implementation of a subset of the JVM for use in high consequence embedded applications. In this context, a majority of the activities belonging to class loading, as it is defined in the specification of the JVM, can be performed statically. Static class loading has the net result of dramatically simplifying the design of the SSP as well as increasing its performance. Due to the high consequence nature of its applications, strong evidence must be provided that all aspects of the SSP have been implemented correctly. This includes the class loader. This article explores the possibility of formally verifying a class loader for the SSP implemented in the strategic programming language TL. Specifically, an implementation of the core activities of an abstract class loader is presented and its verification in ACL2 is considered.

  9. Mogućnost primjene bakterije Lactococcus lactis ssp. lactis kao funkcionalne starter kulture

    OpenAIRE

    Frece, Jadranka; Cvrtila, Jelena; Topić, Ivana; Delaš, Frane; Markov, Ksenija

    2014-01-01

    Svrha je ovoga istraživanja bila identificirati i okarakterizirati potencijalne autohtone funkcionalne starter kulture izolirane iz domaće kobasice proizvedene od konjskog mesa. Dominantnu su mikrofloru u uzorcima kobasica činile bakterije mliječne kiseline (BMK), a zatim mikrokoki. Od bakterija mliječne kiseline prevladavale su vrste Lactococcus lactis ssp. lactis i Lactobacillus plantarum. Vrsta Lactococcus lactis ssp. lactis nije uobičajena u fermentiranim kobasicama, pa smo ju okarakteriz...

  10. Reproductive Ecology of Wyoming Big Sagebrush (Artemisia Tridentata SSP. Wyomingensis) : Effects of Herbivory and Competition

    OpenAIRE

    Decker, Richard T.

    1990-01-01

    Herbivory and plant competition affect sexual reproduction of plants in various ways. Exclusion of mule deer (Odocoileus hemionus) and cattle, removal of plant competition (both inter- and intraspecific), and all combinations of the above treatments were used to examine the individual and combined affects on Artemisia tridentata ssp. wyomingensis (Wyoming big sagebrush) reproduction. Reproduction of Artemisia tridentata ssp. wyomingensis was divided into hierarchical levels of the number of: ...

  11. A Novel Bluetooth Man-In-The-Middle Attack Based On SSP using OOB Association model

    OpenAIRE

    Saravanan, K.; Vijayanand, L.; Negesh, R. K.

    2012-01-01

    As an interconnection technology, Bluetooth has to address all traditional security problems, well known from the distributed networks. Moreover, as Bluetooth networks are formed by the radio links, there are also additional security aspects whose impact is yet not well understood. In this paper, we propose a novel Man-In-The-Middle (MITM) attack against Bluetooth enabled mobile phone that support Simple Secure Pairing(SSP). From the literature it was proved that the SSP association models su...

  12. Evaluación de la calidad funcional y sensorial en cultivares de Triticum aestivum ssp. vulgare y ssp. spelta en cultivo ecológico

    OpenAIRE

    Vargas Kostiuk, María Eugenia

    2016-01-01

    En esta Tesis Doctoral se ha estudiado la influencia del cultivar sobre el comportamiento reológico y panadero de cinco cultivares de trigo sembrados en el mismo año y en el mismo ambiente, en condiciones de cultivo ecológico. Tres de ellos eran de trigo panadero (Triticum aestivum ssp. vulgare), ‘Bonpain’, ‘Craklin’ y ‘Sensas’ y los otros dos de trigo espelta (Triticum aestivum ssp. spelta), ‘Espelta Álava’ y ‘Espelta Navarra’. Actualmente, el alohexaploide trigo panadero (2n=6x=42 genomio A...

  13. Identification of QTLs Related to Bolting in Brassica rapa ssp. pekinensis(syn. Brassica campestris ssp. pekinensis)

    Institute of Scientific and Technical Information of China (English)

    ZHANG Xiao-wei; XIE Cong-hua; WANG Xiao-wu; WU Jian; ZHAO Jian-jun; SONG Xiao-fei; LI Ying; ZHANG Yan-guo; XU Dong-hui; SUN Ri-fei; YUAN Yu-xiang

    2006-01-01

    A genetic linkage map of Brassica rapa ssp. pekinensis was constructed with 186 AFLP (amplified fragment length polymorphism) markers by using a doubled-haploid (DH) population with 183 individuals. The individuals were derived from F1 which was developed by crossing a bolting resistant DH line Y-177-12 and an easy bolting DH line Y195-93a.AFLPs were generated by the use of restriction enzymes EcoR Ⅰ and Mse Ⅰ. The segregation of each marker and linkage was analyzed by using JoinMap version 3.0. Mapped markers were aligned in ten linkage groups which covered 887.8 cM with an average marker interval of 4.47 cM. Markers showing skewed segregation ratio were clustered in six LGs.Quantitative trait loci (QTL) were mapped for bolting resistance by using MAPQTL 4.0 package. Four QTLs explaining from 7.0 to 9.4% of the total variation were detected, all of them increase bolting resistance. These mapped QTLs could be used to develop a marker assisted selection programme for bolting resistance breeding.

  14. Cytogenetic Diversity of Simple Sequences Repeats in Morphotypes of Brassica rapa ssp. chinensis.

    Science.gov (United States)

    Zheng, Jin-Shuang; Sun, Cheng-Zhen; Zhang, Shu-Ning; Hou, Xi-Lin; Bonnema, Guusje

    2016-01-01

    A significant fraction of the nuclear DNA of all eukaryotes is comprised of simple sequence repeats (SSRs). Although these sequences are widely used for studying genetic variation, linkage mapping and evolution, little attention had been paid to the chromosomal distribution and cytogenetic diversity of these sequences. In this paper, we report the distribution characterization of mono-, di-, and tri-nucleotide SSRs in Brassica rapa ssp. chinensis. Fluorescence in situ hybridization was used to characterize the cytogenetic diversity of SSRs among morphotypes of B. rapa ssp. chinensis. The proportion of different SSR motifs varied among morphotypes of B. rapa ssp. chinensis, with tri-nucleotide SSRs being more prevalent in the genome of B. rapa ssp. chinensis. We determined the chromosomal locations of mono-, di-, and tri-nucleotide repeat loci. The results showed that the chromosomal distribution of SSRs in the different morphotypes is non-random and motif-dependent, and allowed us to characterize the relative variability in terms of SSR numbers and similar chromosomal distributions in centromeric/peri-centromeric heterochromatin. The differences between SSR repeats with respect to abundance and distribution indicate that SSRs are a driving force in the genomic evolution of B. rapa species. Our results provide a comprehensive view of the SSR sequence distribution and evolution for comparison among morphotypes B. rapa ssp. chinensis. PMID:27507974

  15. Optimal Control Strategy for Marine Ssp Podded Propulsion Motor Based on Strong Tracking-Epf

    Directory of Open Access Journals (Sweden)

    Yao Wenlong

    2015-09-01

    Full Text Available Aiming at the non-linearity of state equation and observation equation of SSP (Siemen Schottel Propulsor propulsion motor, an improved particle filter algorithm based on strong tracking extent Kalman filter (ST-EKF was presented, and it was imported into the marine SSP propulsion motor control system. The strong tracking filter was used to update particles in the new algorithm and produce importance densities. As a result, the problems of particle degeneracy and sample impoverishment were ameliorated, the propulsion motor states and the rotor resistance were estimated simultaneously using strong track filter (STF, and the tracking ability of marine SSP propulsion motor control system was improved. Simulation result shown that the improved EPF algorithm was not only improving the prediction accuracy of the motor states and the rotor resistance, but also it can satisfy the requirement of navigation in harbor. It had the better accuracy than EPF algorithm.

  16. The transfer RNA genes in Oryza sativa L.ssp.indica

    Institute of Scientific and Technical Information of China (English)

    王希胤; 史晓黎; 郝柏林

    2002-01-01

    The availability of the draft genome sequence of Oryza sativa L. ssp. indica has made it possible to study the rice tRNA genes. A total of 596 tRNA genes, including 3 selenocysteine tRNA genes and one suppressor tRNA gene are identified in 127551 rice contigs. There are 45 species of tRNA genes and the revised wobble hypothesis proposed by Guthrie and Abelson is perfectly obeyed. The relationship between codon usage and the number of corresponding tRNA genes is discussed. Redundancy may exist in the present list of tRNA genes and novel ones may be found in the future. A set of 33 tRNA genes is discovered in the complete chloroplast genome of Oryza sativa L. ssp. indica. These tRNA genes are identical to those in ssp. japonica identified by us independently from the origional annotation.

  17. Some aspects of cultivation and utilization of waxy maize (Zea mays L. ssp. ceratina

    Directory of Open Access Journals (Sweden)

    Agnieszka Klimek-Kopyra

    2012-10-01

    Full Text Available This paper is a review of available literature on Zea mays L.ssp.ceratina. It contains information on the origin, cul- tivation and utilization of waxy maize in the world and can be a contribution to the development of new research on maize cultivation and starch processing technology. Maize, as an old and economically important cereal, played an enormous role in the ancient civilisations of the New World. Among the maize subspecies compared, Z. mays ssp. indurata and Z. mays ssp. indentata are now the most important in Poland. The subspecies Z. mays ssp. saccharata has a marginal role, while Z. mays ssp. ceratina has not been hitherto cultivated. Decisions to introduce the subspecies Z. mays ssp. ceratina into cultivation are based on different grounds, taking into account both agro-climatic conditions and industrial uses of grain processing products. The growing demand for maize grain, stimulated by the increased demand for maize starch and oil in the global market as raw materials that are important in food production, is an impulse for the development of agrobiological research. The development of the starch industry, associated with the demand for industrial starch, will probably contribute to increased interest in this subspecies in Central Europe, also including Poland. Waxy maize grain can be a major ingredient of high-energy feeds for livestock, replacing in this role the type of maize that has been grown for this purpose until now. A great advantage of waxy maize is its specific structure of starch, due to its unique and high amylopectin content (95-98%, which creates unlimited possibilities of industrial use. Currently, waxy maize acreage in Europe does not exceed 2% of the maize crop area in this continent.

  18. INDUSTRIJSKA KONOPLJA (Cannabis sativa L. ssp. sativa) V SLOVENIJI IN PO SVETU

    OpenAIRE

    Medved, Meta

    2012-01-01

    Gojenje industrijske konoplje (Cannabis sativa L. ssp. sativa) ima v Sloveniji in po svetu še vedno negativen prizvok. Razlog za to je sorodnost te rastline z indijsko konopljo (Cannabis sativa L. ssp. indica), ki se vzgaja za pridobivanje droge. To se odraža tudi v zakonodaji, ki nekaterim državam prepoveduje, drugim pa omejuje gojenje konoplje. Namen te raziskave je predstaviti uporabnost in dobičkonosnost pri pridelavi konoplje, ter preveriti vpliv pojavnosti droge, indijske konoplje na ...

  19. The catalase gene differentiates between some strains of Staphylococcus aureus ssp. anaerobius

    OpenAIRE

    Musa, N. O.; Eltom, K.; Gessler, F.; H. Böhnel; Babiker, A.; Sanousi, S. M.

    2010-01-01

    Staphylococcus aureus ssp anaerobius strain S10 was isolated from an outbreak of sheep abscess disease. Sequence of the catalase gene of this strain showed 99 % identity to the catalase gene (katB) sequence of the reference strain (S. aureus ssp. anaerobius strain MVF213) with mismatching of three base pairs. An important substitution located 1036 nucleotides upstream of the initiation codon from “C” in katB to “T” in the catalase gene of strain S10 originated a stop codon. The de...

  20. A Novel Bluetooth Man-In-The-Middle Attack Based On SSP using OOB Association model

    CERN Document Server

    Saravanan, K; Negesh, R K

    2012-01-01

    As an interconnection technology, Bluetooth has to address all traditional security problems, well known from the distributed networks. Moreover, as Bluetooth networks are formed by the radio links, there are also additional security aspects whose impact is yet not well understood. In this paper, we propose a novel Man-In-The-Middle (MITM) attack against Bluetooth enabled mobile phone that support Simple Secure Pairing(SSP). From the literature it was proved that the SSP association models such as Numeric comparison, Just works and passkey Entry are not more secure. Here we propose the Out Of Band (OOB) channeling with enhanced security than the previous methods.

  1. Powdery scab effect on the potato Solanum tuberosum ssp. andigena growth and yield Efeito da sarna pulverulenta no desenvolvimento e produtividade da batata Solanum tuberosum ssp. andigena

    OpenAIRE

    Elizabeth Gilchrist; Juliana Soler; Ueli Merz; Sebastian Reynaldi

    2011-01-01

    Powdery scab affects most potato production zones in the world. The causal organism Spongospora subterranea f. sp. subterranea forms galls in roots and lesions on tubers during its replication. Recent researches suggest that S. subterranea could cause harmful effects on the host plant and potentially on yield.In order to quantify the disease impact on plant growth and yield, potato Solanum tuberosum ssp. andigena, cv. Diacol Capiro was grown in a soil infested with S. subterranea and compared...

  2. Tolerance and safety of Lactobacillus paracasei ssp. paracasei in combination with Bifidobacterium animalis ssp. lactis in a prebiotic-containing infant formula: a randomised controlled trial

    OpenAIRE

    Vlieger, A.M.; Robroch, A.; van Buuren, S; Kiers, J; Rijkers, G.; Benninga, M A; Biesebeke, R. te

    2009-01-01

    The addition of probiotics to infant formula has been shown to be an efficient way to increase the number of beneficial bacteria in the intestine in order to promote a gut flora resembling that of breast-fed infants. The objective of the present study was to evaluate the safety and tolerance of a combination of two probiotic strains in early infancy. A group of 126 newborns were randomised to receive a prebiotic-containing starter formula supplemented with Lactobacillus paracasei ssp. paracas...

  3. Proteomic analysis of bronchoalveolar lavage fluid proteins from mice infected with Francisella tularensis ssp novicida

    Energy Technology Data Exchange (ETDEWEB)

    Varnum, Susan M.; Webb-Robertson, Bobbie-Jo M.; Pounds, Joel G.; Moore, Ronald J.; Smith, Richard D.; Frevert, Charles; Skerret, Shawn J.; Wunschel, David S.

    2012-07-06

    Francisella tularensis causes the zoonosis tularemia in humans and is one of the most virulent bacterial pathogens. We utilized a global proteomic approach to characterize protein changes in bronchoalveolar lavage fluid from mice exposed to one of three organisms, F. tularensis ssp. novicida, an avirulent mutant of F. tularensis ssp. novicida (F.t. novicida-ΔmglA); and Pseudomonas aeruginosa. The composition of BALF proteins was altered following infection, including proteins involved in neutrophil activation, oxidative stress and inflammatory responses. Components of the innate immune response were induced including the acute phase response and the complement system, however the timing of their induction varied. Francisella tularensis ssp. novicida infected mice do not appear to have an effective innate immune response in the first hours of infection, however within 24 hours they show an upregulation of innate immune response proteins. This delayed response is in contrast to P. aeruginosa infected animals which show an early innate immune response. Likewise, F.t. novicida-ΔmglA infection initiates an early innate immune response, however this response is dimished by 24 hours. Finally, this study identifies several candidate biomarkers, including Chitinase 3-like-1 (CHI3L1 or YKL-40) and peroxiredoxin 1, that are associated with F. tularensis ssp. novicida but not P. aeruginosa infection.

  4. PENGEMBANGAN SSP FISIKA BERBASIS PENDEKATAN CTL UNTUK MENINGKATKAN KETERAMPILAN PROSES SAINS DAN MOTIVASI BELAJAR

    Directory of Open Access Journals (Sweden)

    Faiq Makhdum Noor

    2015-04-01

    Full Text Available This research aims to develop a learning device as Subject-Specific Pedagogy (SSP of physics, and to improve science process skills and learning motivation of the students. This research used the 4D model. The subjects of this research were the XI grade students of Muhammadiyah High School 2 Yogyakarta. The data collecting instruments were expert validation sheets, science process skill observation sheets, questionnaire of students’ response to the student books and worksheets, question-naire of students’ response to teaching process, students’ motivation learning sheets, and science process skill paper test. The research data were collected through observation, questionnaire, and paper test, and analyzed quantitatively. The results show as follows. (1 The development of physics SSP is carried out in accordance with the procedures of 4D model product development. (2 The results of expert’s validation show the physics SSP is in the very good criteria. (3 The readability of the student books and worksheets is in the good criteria. (4 The increasing of the score of science process skills and students’ learning motivation in the experimental class is higher than that in the control class. This shows that the physics SSP is fit for use in physics teaching.

  5. Identification of functional candidates amongst hypothetical proteins of Treponema pallidum ssp. pallidum.

    Science.gov (United States)

    Naqvi, Ahmad Abu Turab; Shahbaaz, Mohd; Ahmad, Faizan; Hassan, Md Imtaiyaz

    2015-01-01

    Syphilis is a globally occurring venereal disease, and its infection is propagated through sexual contact. The causative agent of syphilis, Treponema pallidum ssp. pallidum, a Gram-negative sphirochaete, is an obligate human parasite. Genome of T. pallidum ssp. pallidum SS14 strain (RefSeq NC_010741.1) encodes 1,027 proteins, of which 444 proteins are known as hypothetical proteins (HPs), i.e., proteins of unknown functions. Here, we performed functional annotation of HPs of T. pallidum ssp. pallidum using various database, domain architecture predictors, protein function annotators and clustering tools. We have analyzed the sequences of 444 HPs of T. pallidum ssp. pallidum and subsequently predicted the function of 207 HPs with a high level of confidence. However, functions of 237 HPs are predicted with less accuracy. We found various enzymes, transporters, binding proteins in the annotated group of HPs that may be possible molecular targets, facilitating for the survival of pathogen. Our comprehensive analysis helps to understand the mechanism of pathogenesis to provide many novel potential therapeutic interventions. PMID:25894582

  6. Transfer of soft kernel texture from Triticum aestivum to durum wheat, Triticum turgidum ssp. durum

    Science.gov (United States)

    Durum wheat (Triticum turgidum ssp. durum) is a leading cereal grain whose primary use is the production of semolina and then pasta. Its rich culinary relationship to humans is related, in part, to its very hard kernel texture. This very hard texture is due to the loss of the Puroindoline genes whi...

  7. Effect of Mo-Doped Mesoporous Al-SSP Catalysts for the Catalytic Dehydration of Ethanol to Ethylene

    Directory of Open Access Journals (Sweden)

    Titinan Chanchuey

    2016-01-01

    Full Text Available The catalytic dehydration of ethanol to ethylene over the mesoporous Al-SSP and Mo-doped Al-SSP catalysts was investigated. The Al-SSP catalyst was first synthesized by the modified sol-gel method and then doped with Mo by impregnation to obtain 1% Mo/Al-SSP and 5% Mo/Al-SSP catalysts (1 and 5 wt% of Mo. The final catalysts were characterized using various techniques such as XRD, N2 physisorption, SEM/EDX, TEM, and NH3-TPD. The catalytic activity for all catalysts in gas-phase ethanol dehydration reaction was determined at temperature range of 200°C to 400°C. It was found that the most crucial factor influencing the catalytic activities appears to be the acidity. The acid property of catalysts depended on the amount of Mo loading. Increased Mo loading in Al-SSP resulted in increased weak acid sites, which enhanced the catalytic activity. Besides acidity, the high concentration of Al at surface of catalyst is also essential to obtain high activity. Based on the results, the most suitable catalyst in this study is 1% Mo/Al-SSP catalyst, which can produce ethylene yield of ca. 90% at 300°C with slight amounts of diethyl ether (DEE and acetaldehyde.

  8. Mycoplasma hominis ssp. associated endocarditis with myocardial necrosis in an alpaca (Vicugna pacos) in Manitoba in 2011

    OpenAIRE

    Tomczyk, Krzysztof M.; Copeland, Shelagh; Postey, Rosemary; Ngeleka, Musangu

    2015-01-01

    Severe endocarditis with myonecrosis, moderate to severe pleural and pericardial effusions, and mild ascites were found on necropsy in 3 alpacas. Mycoplasma hominis ssp. was detected on polymerase chain reaction (PCR) of fresh affected endocardial tissue in 1 alpaca.

  9. Whole Genome Sequence of Treponema pallidum ssp. pallidum, Strain Mexico A, Suggests Recombination between Yaws and Syphilis Strains

    OpenAIRE

    Pětrošová, Helena; Zobaníková, Marie; Čejková, Darina; Mikalová, Lenka; Pospíšilová, Petra; Strouhal, Michal; Chen, Lei; Qin, Xiang; Muzny, Donna M; Weinstock, George M.; Šmajs, David

    2012-01-01

    Background Treponema pallidum ssp. pallidum (TPA), the causative agent of syphilis, and Treponema pallidum ssp. pertenue (TPE), the causative agent of yaws, are closely related spirochetes causing diseases with distinct clinical manifestations. The TPA Mexico A strain was isolated in 1953 from male, with primary syphilis, living in Mexico. Attempts to cultivate TPA Mexico A strain under in vitro conditions have revealed lower growth potential compared to other tested TPA strains. Methodology/...

  10. Susceptibility of wild carrot (Daucus carota ssp. carota) to Sclerotinia sclerotiorum

    DEFF Research Database (Denmark)

    Jensen, Brita Dahl; Finckh, M.R.; Munk, Lisa;

    2008-01-01

    Sclerotinia soft rot, caused by Sclerotinia sclerotiorum, is a severe disease of cultivated carrots (Daucus carota ssp. sativus) in storage. It is not known whether Sclerotinia soft rot also affects wild carrots (D. carota ssp. carota), which hybridise and exchange genes, among them resistance...... genes, with the cultivated carrot. We investigated the susceptibility of wild carrots to S. sclerotiorum isolates from cultivated carrot under controlled and outdoor conditions. Inoculated roots from both wild and cultivated plants produced sclerotia and soft rot in a growth chamber test. Two isolates...... differed significantly in the ability to produce lesions and sclerotia on roots of both wild carrots and cv. Bolero. Flowering stems of wild carrots produced dry, pale lesions after inoculation with the pathogen, and above-ground plant weight was significantly reduced 4 weeks after inoculation...

  11. Chemical Composition and Antimicrobial Activity of Thymus praecox Opiz ssp. polytrichus Essential Oil from Serbia

    Directory of Open Access Journals (Sweden)

    Nada V. Petrović

    2016-03-01

    Full Text Available Chemical composition and antimicrobial activity of the essential oil of wild growing Thymus praecox Opiz ssp. polytrichus were studied. trans-Nerolidol (19.79%, germacrene D (18.48% and thymol (9.62% were the main components in essential oil. This study is the first report of the antimicrobial activity of essential oil obtained from the T. praecox Opiz ssp. polytrichus. Antimicrobial activity of essential oil was investigated on Bacillus cereus, Micrococcus flavus, Staphylococcus aureus, Listeria monocytogenes, Escherichia coli, Pseudomonas aeruginosa, Enterobacter cloacae, Salmonella typhimurium, Aspergillus fumigatus, A. versicolor, A. ochraceus, A. niger, Trichoderma viride, Penicillium funiculosum, P. ochrochloron, and P. verrucosum var. cyclopium strains. In the antimicrobial assays, essential oil showed high antimicrobial potential (MIC 19–150 m g/mL, MBC 39–300 m g/mL for bacteria; and MIC 19.5–39 m g/mL, MFC 39–78 m g/mL for fungi.

  12. Chemical Composition of Different Botanical Origin Honeys Produced by Sicilian Black Honeybees (Apis mellifera ssp. sicula).

    Science.gov (United States)

    Mannina, Luisa; Sobolev, Anatoly P; Di Lorenzo, Arianna; Vista, Silvia; Tenore, Gian Carlo; Daglia, Maria

    2015-07-01

    In 2008 a Slow Food Presidium was launched in Sicily (Italy) for an early warning of the risk of extinction of the Sicilian native breed of black honeybee (Apis mellifera L. ssp sicula). Today, the honey produced by these honeybees is the only Sicilian honey produced entirely by the black honeybees. In view of few available data regarding the chemical composition of A. mellifera ssp. sicula honeys, in the present investigation the chemical compositions of sulla honey (Hedysarum coronarium L.) and dill honey (Anethum graveolens L.) were studied with a multimethodological approach, which consists of HPLC-PDA-ESI-MSn and NMR spectroscopy. Moreover, three unifloral honeys (lemon honey (obtained from Citrus limon (L.) Osbeck), orange honey (Citrus arantium L.), and medlar honey (Eriobotrya japonica (Thunb.) Lindl)), with known phenol and polyphenol compositions, were studied with NMR spectroscopy to deepen the knowledge about sugar and amino acid compositions. PMID:25730368

  13. Applicability of Phytoextraction with Arabidopsis halleri ssp. gemmifera to Remediate Cd-contaminated Andisols

    Science.gov (United States)

    Kameyama, Koji; Tani, Shigeru; Sugawara, Reiko; Ishikawa, Yuichi

    The objective of this study was to investigate the applicability of phytoextraction with a Cd-hyperaccumulator plant (Arabidopsis halleri ssp. gemmifera) to remediate Cd-contaminated Andisols. Cd absorption potentials of this plant for Andisols were examined in pot experiments. Sequentially, phytoextraction durations for remediation of Cd-contaminated Andisols were calculated from the experimental data. The results were as follows: (1) Cd concentrations in the plant shoots ranged from 170-750 mgṡkg-1. (2) Cd absorption of the plant for Andisols with ALC (Autoclaved Lightweight aerated Concrete) was less than for Andisols without ALC. However, the plants absorbed the same amount of soil Cd extracted by 0.01 M HCl with or without ALC. (3) Calculations suggest that the applicability of phytoextraction with this plant is high for slightly contaminated Andisols. Therefore, phytoextraction with Arabidopsis halleri ssp. gemmifera may be a viable option for the remediation of Cd-contaminated Andisols.

  14. SSP: a simple software process for small- size software development projects

    OpenAIRE

    Ochoa, Sergio; Pino, José A.; Luis A. Guerrero; Cesar A Collazos

    2006-01-01

    A large number of software development projects in Latin- American countries are small-size, poorly defined and time pressured. These projects usually involve under qualified people. Provided that well-known software development models have shown limited applicability in such scenario, developers usually carry out ad-hoc software processes. Therefore, the obtained results are unpredictable. This article presents a Simple Software Process (SSP) for small-size software projects involving under ...

  15. Stem rust (Puccinia graminis ssp. graminicola Urban) its hosts and harmfulness in grasses grown for seed

    OpenAIRE

    Maria Prończuk

    2013-01-01

    Stem rust development on four species of grasses was studied in field experiments conducted at Radzików in 1997-2001. Population of Puccinia graminis ssp. graminicola from different hosts was characterised and their harmfulness for grass grown for seed was estimated. The materials for study were ecotypes and strains of Lolium perenne, Festuca rubra, Poa pratensis and Deschampsia caespitosa collected in breeding nursery and cultivars and strains of L.perenne, F.rubra, P.pratensis cultivated f...

  16. Stem rust (Puccinia graminis ssp. graminicola Urban its hosts and harmfulness in grasses grown for seed

    Directory of Open Access Journals (Sweden)

    Maria Prończuk

    2013-12-01

    Full Text Available Stem rust development on four species of grasses was studied in field experiments conducted at Radzików in 1997-2001. Population of Puccinia graminis ssp. graminicola from different hosts was characterised and their harmfulness for grass grown for seed was estimated. The materials for study were ecotypes and strains of Lolium perenne, Festuca rubra, Poa pratensis and Deschampsia caespitosa collected in breeding nursery and cultivars and strains of L.perenne, F.rubra, P.pratensis cultivated for seed. It was found that the changes in environmental conditions during last years influenced earlier occurrence of stem rust on grasses in Poland. All examined species were the host of P.graminis ssp. graminicola, however the period of infection of particular hosts were different. L.perenne and D.caespitosa were infected in early summer but F.rubra and P.pratensis in late summer or in the autumn. Morphological analysis of spores of P.graminis ssp. graminicola have shoved significant differences between populations obtained from L.perenne and D.caespitosa. Some differences were found between populations from F.rubra and P.pratensis also, but they need more study. Every year occurrence of stem rust on L.perenne and D.caespitosa and its relation with spring temperature in Radzików indicated that populations of patogen could overwinter in local turf. Incidental appearance of stem rust on F.rubra and P.pratensis in centre of Poland allowed to suppose that spores of these forms might be transfer by wind from other regions. The investigation revealed that stem rust can be dangerous for L.perenne grown for seed when infection occurs at flowering time. It has been established that infection of F.rubra and P.pratensis in autumn should not be disregarded. Damages of leaves by P.graminis ssp. graminicola substantially limited plant heading in the next year.

  17. Khorasan wheat population researching (Triticum turgidum, ssp. Turanicum (McKey) in the minimum tillage conditions

    OpenAIRE

    Ikanović Jela; Popović Vera; Janković Snežana; Živanović Ljubiša; Rakić Sveto; Dončić Dalibor

    2014-01-01

    Khorasan wheat occupies a special place in the group of new-old cereals (Triticum turgidum, ssp. Turanicum McKey). It is an ancient species, native to eastern Persia, that is very close to durum wheat by morphological characteristics. Investigations were carried out in agro ecological conditions of the eastern Srem, with two wheat populations with dark and bright awns as objects of study. The following morphological and productive characteristics were inves...

  18. Failure of PCR to Detect Treponema pallidum ssp. pertenue DNA in Blood in Latent Yaws

    OpenAIRE

    Marks, Michael; Katz, Samantha; Chi, Kai-Hua; Vahi, Ventis; Sun, Yongcheng; Mabey, David C.; Solomon, Anthony W; Chen, Cheng Y.; Pillay, Allan

    2015-01-01

    Yaws, caused by Treponema pallidum ssp. pertenue, is a neglected tropical disease closely related to venereal syphilis and is targeted for eradication by 2020. Latent yaws represents a diagnostic challenge, and current tools cannot adequately distinguish between individuals with true latent infection and individuals who are serofast following successful treatment. PCR on blood has previously been shown to detect T. pallidum DNA in patients with syphilis, suggesting that this approach may be o...

  19. Incorporation of probiotic bacteria (Lactobacillus acidophilus and Bifidobacterium ssp.) in Argentinean ovine cheese

    OpenAIRE

    Perotti, María; Wolf, Irma; Addis, Margherita; Comunian, Roberta; Paba, Antonio; Meinardi, Carlos

    2014-01-01

    The market of cheeses from ewe’s milk has been growing steadily in Argentina. The nutritional benefits of these products can be enhanced by adding probiotic cultures. In the present study, the survival of a mix of probiotic microorganisms (Lactobacillus acidophilus La-5 and Bifidobacterium animalis ssp. lactis Bb12) in a semi-hard ovine cheese, manufactured with a technology previously developed in our institute was evaluated. Besides, the effect of its incorporation on the chemical compositi...

  20. Brain SPECT analysis by 3D-SSP and clinical features of Parkinson's disease

    International Nuclear Information System (INIS)

    The aim of the present study is to investigate the association of symptoms in Parkinson's disease (PD) with cerebral perfusion on single photon emission computed tomography (SPECT). The clinical features of PD were compared with SPECT images of the brain obtained by three-dimensional stereotactic surface projection (3D-SSP) analysis. Thirty-eight patients who had PD without dementia (17 men and 21 women with a mean age of 68.6±4.7 years) were enrolled in this study. Their symptoms were rated using the unified parkinson's disease rating scale (UPDRS). Within a week, all patients were examined by SPECT with I-123, and reconstructed images were analyzed with 3D-SSP using an image-analysis software, iSSP ver. 3.5. Data on brain surface perfusion extracted by 3D-SSP analysis were compared between the PD patients and the normal control group. The same comparisons were made for subgroups of PD patients with severe symptoms, such as tremor, gait disturbance, bradykinesia, and the UPDRS motor score. Cerebral perfusion was decreased at the anterior cingulate cortex and occipital lobe of the PD patients compared with the normal controls. In the subgroups with severe gait disturbance and severe bradykinesia, additional hypoperfusion was seen at the lateral frontal association and lateral temporal association and the medial frontal gyrus, and by the pixel-by-pixel comparison, perfusion was significantly decreased (p<0.05) at the medial frontal gyrus and anterior cingulate cortex compared with the normal control group. In PD patients, severe gait disturbance and bradykinesia may be correlated with hypoperfusion of the medial aspect of the frontal lobe. This suggests that functional disturbance of the supplementary motor area and other parts of the frontal lobe are involved in the development of gait disturbance and bradykinesia in PD. (author)

  1. L. peruvianum as a source for resistance to C michiganensis ssp. michiganensis in tomato

    OpenAIRE

    Heusden, van, E.C.H.; Vrielink, R.; Lindhout, P.

    1995-01-01

    Twenty three accessions of L. peruvianum were screened for resistance to Clavibater michiganensis ssp. michiganensis (bacterial canker). Resistance was detected in five accessions. One of these, L. peruvianum LA2157 was crossed with a susceptible accession of L. peruvainum and with the cultivated tomato. Evaluation of the segragation of the progenies for disease resistance and of RFLP markers identified several regions that are involved bacterial canker resistance. Two resistance loci cross e...

  2. Failure of PCR to Detect Treponema pallidum ssp. pertenue DNA in Blood in Latent Yaws.

    Science.gov (United States)

    Marks, Michael; Katz, Samantha; Chi, Kai-Hua; Vahi, Ventis; Sun, Yongcheng; Mabey, David C; Solomon, Anthony W; Chen, Cheng Y; Pillay, Allan

    2015-01-01

    Yaws, caused by Treponema pallidum ssp. pertenue, is a neglected tropical disease closely related to venereal syphilis and is targeted for eradication by 2020. Latent yaws represents a diagnostic challenge, and current tools cannot adequately distinguish between individuals with true latent infection and individuals who are serofast following successful treatment. PCR on blood has previously been shown to detect T. pallidum DNA in patients with syphilis, suggesting that this approach may be of value in yaws. We performed real-time PCR for Treponema pallidum ssp. pertenue on blood samples from 140 children with positive T. pallidum Particle Agglutination (TPPA) and Rapid Plasma Reagin (RPR) tests and 7 controls (negative serology), all collected as part of a prospective study of yaws in the Solomon Islands. All samples were also tested by a nested PCR for T. pallidum. 12 patients had clinical evidence of active yaws whilst 128 were considered to have latent yaws. 43 children had high titre rapid plasma reagins (RPRs) of ≥1:32. PCR testing with both assays gave negative results in all cases. It is possible that the failure to detect T. pallidum ssp. pertenue in blood reflects lower loads of organism in latent yaws compared to those in latent infection with T. pallidum ssp. pertenue, and/or a lower propensity for haematogenous dissemination in yaws than in syphilis. As the goal of the yaws control programme is eradication, a tool that can differentiate true latent infection from individuals who are serofast would be of value; however, PCR of blood is not that tool. PMID:26125585

  3. Failure of PCR to Detect Treponema pallidum ssp. pertenue DNA in Blood in Latent Yaws.

    Directory of Open Access Journals (Sweden)

    Michael Marks

    Full Text Available Yaws, caused by Treponema pallidum ssp. pertenue, is a neglected tropical disease closely related to venereal syphilis and is targeted for eradication by 2020. Latent yaws represents a diagnostic challenge, and current tools cannot adequately distinguish between individuals with true latent infection and individuals who are serofast following successful treatment. PCR on blood has previously been shown to detect T. pallidum DNA in patients with syphilis, suggesting that this approach may be of value in yaws. We performed real-time PCR for Treponema pallidum ssp. pertenue on blood samples from 140 children with positive T. pallidum Particle Agglutination (TPPA and Rapid Plasma Reagin (RPR tests and 7 controls (negative serology, all collected as part of a prospective study of yaws in the Solomon Islands. All samples were also tested by a nested PCR for T. pallidum. 12 patients had clinical evidence of active yaws whilst 128 were considered to have latent yaws. 43 children had high titre rapid plasma reagins (RPRs of ≥1:32. PCR testing with both assays gave negative results in all cases. It is possible that the failure to detect T. pallidum ssp. pertenue in blood reflects lower loads of organism in latent yaws compared to those in latent infection with T. pallidum ssp. pertenue, and/or a lower propensity for haematogenous dissemination in yaws than in syphilis. As the goal of the yaws control programme is eradication, a tool that can differentiate true latent infection from individuals who are serofast would be of value; however, PCR of blood is not that tool.

  4. Patogenicidad de "Phytophthora spp." causantes de podredumbre radical de "Quercus ilex ssp." "ballota" en viveros forestales

    OpenAIRE

    Andicoberry de los Reyes, Sergio; M. E. Sánchez; Trapero Casas, Antonio

    2004-01-01

    Within a research project on quality of plants for forestation of agricultural lands, we studied the etiology of a root rot affecting holm oak (Quercus ilex ssp. ballota) seedlings in two forest nurseries in southern Spain. Major disease symptoms were foliar wilting and necrosis of feeder roots. Three fungal species, Phytophthora cinnamomi, P. cryptogea and P. drechsleri, were isolated from necrotic roots of holm oak. Isolates of the three species showed similar growth patterns at different t...

  5. Complete genome sequence of Treponema pallidum ssp. pallidum strain SS14 determined with oligonucleotide arrays

    OpenAIRE

    Sodergren Erica; Petrosino Joseph F; Palzkill Timothy; Norris Steven J; Šmajs David; Strouhal Michal; Matějková Petra; Norton Jason E; Singh Jaz; Richmond Todd A; Molla Michael N; Albert Thomas J; Weinstock George M

    2008-01-01

    Abstract Background Syphilis spirochete Treponema pallidum ssp. pallidum remains the enigmatic pathogen, since no virulence factors have been identified and the pathogenesis of the disease is poorly understood. Increasing rates of new syphilis cases per year have been observed recently. Results The genome of the SS14 strain was sequenced to high accuracy by an oligonucleotide array strategy requiring hybridization to only three arrays (Comparative Genome Sequencing, CGS). Gaps in the resultin...

  6. Environmental Restoration and Waste Management Site-Specific Plan (SSP) for fiscal year 1992 (FY92)

    International Nuclear Information System (INIS)

    The FY-92 Site-Specific Plan (FY-92 SSP) for environmental restoration and waste management at the Idaho National Engineering Laboratory (INEL) is designed to provide the reader with easy access to the status of environmental restoration and waste management activities at INEL. The first chapter provides background on INIEL's physical environment, site history and mission, and general information about the site and its facilities. In addition, this chapter discusses the inter-relationships between the Site Specific Plan, the Environmental Restoration and Waste Management Five-Year Plan, the environmental restoration and waste management prioritization systems, and the Activity Data Sheets (ADSs) for environmental restoration and waste management. This discussion should help readers understand what the SSP is and how it fits into the environmental restoration and waste management process at INEL. This understanding should provide the reader with a better context for understanding the discussions in the SSP as well as a better feel for how and what to comment on during the public comment period that will be held from the first of September through the end of October 1991

  7. The catalase gene differentiates between some strains of Staphylococcus aureus ssp. anaerobius.

    Science.gov (United States)

    Musa, N O; Eltom, K; Gessler, F; Böhnel, H; Babiker, A; El Sanousi, S M

    2010-05-01

    Staphylococcus aureus ssp anaerobius strain S10 was isolated from an outbreak of sheep abscess disease. Sequence of the catalase gene of this strain showed 99% identity to the catalase gene (katB) sequence of the reference strain (S. aureus ssp. anaerobius strain MVF213) with mismatching of three base pairs. An important substitution located 1036 nucleotides upstream of the initiation codon from "C" in katB to "T" in the catalase gene of strain S10 originated a stop codon. The deduced protein (345 amino acids) is 105 amino acids shorter than that of katB. Partial sequence of the catalase gene of other 8 local isolates in addition to another reference strain (DSM 20714/ATCC 35844) revealed the same mutations in all local (African) strains, whereas the sequence of the reference (European) strain was typical to that of katB. Sequence of the catalase gene of S. aureus ssp. anaerobius strain S10 was deposited in GenBank under accession no. EU281993. PMID:20526831

  8. Evaluation of different DNA-based fingerprinting methods for typing Photobacterium damselae ssp. piscicida.

    Science.gov (United States)

    Mancuso, Monique; Avendaño-Herrera, Rubén; Zaccone, R; Toranzo, Alicia E; Magariños, Beatriz

    2007-01-01

    This study evaluates the effectiveness of three different molecular techniques, repetitive extragenic palindromic PCR (REP-PCR), enterobacterial repetitive intergenic consensus sequence PCR (ERIC-PCR) and the random amplified polymorphic DNA (RAPD-PCR) for rapid typing of Photobacterium damselae ssp. piscicida strains isolated from different species of marine fish and geographic areas. The results obtained by the three methods showed that RAPD and ERIC-PCR were more discriminative for suitable rapid typing of Ph. damselae ssp. piscicida than REP-PCR. The analysis of DNA banding patterns generated by both molecular methods (RAPD and ERIC-PCR) clearly separated the strains into two main groups that strongly correlated with their geographic origin. Moreover, the REP-PCR analysis was less reproducible than the RAPD and ERIC-PCR methods and does not allow the establishment of genetic groups. RAPD and ERIC-PCR constitute valuable tools for molecular typing of Ph. damselae ssp. piscicida strains, which can be used in epidemiological studies of photobacteriosis infections. PMID:17657358

  9. Investigation of biological activity of polar extracts isolated from Phlomis crinita Cav ssp. mauritanica Munby.

    Science.gov (United States)

    Limem-Ben Amor, Ilef; Skandrani, Ines; Boubaker, Jihed; Ben Sghaïer, Mohamed; Neffati, Aicha; Bhouri, Wissem; Bouhlel, Ines; Chouchane, Nabil; Kilani, Soumaya; Guedon, Emmanuel; Ghoul, Mohamed; Ghedira, Kamel; Chekir-Ghedira, Leila

    2009-01-01

    The lyophilized infusion, the methanol, the ethyl acetate, and the total oligomer flavonoid (TOF)-enriched extracts prepared from the dried leaves of Phlomis crinita Cav. ssp. mauritanica Munby were investigated for the contents of flavonoids, tannins, coumarines and steroids. Antibacterial activity was investigated toward five bacterial strains. An inhibitory effect was observed against Staphyllococcus aureus and Enterococcus feacalis, and the minimal inhibitory concentrations ranged from 2.5 to 5 mg/mL of extract. The tested extracts exhibit an important free radical scavenging activity toward the 1,1-diphenyl 2-picrylhydrazyl (DPPH) free radical; with IC(50) values of 30.5, 6, 32, and 31.5 microg/mL, respectively, in the presence of lyophilized infusion, the TOF, the methanol, and the ethyl acetate extracts. Genotoxic and antigenotoxic properties of the different extracts were studied by using the SOS chromotest with Escherichia coli PQ37. The lyophilized infusion and TOF extracts obtained from P. crinita ssp. mauritanica showed no genotoxicity, whereas methanol and ethyl acetate extracts are considered as marginally genotoxic. On the other hand, we showed that each extract inhibited the mutagenicity induced by aflatoxin B1 (AFB1) (10 microg/assay) and nifuroxazide (NF) (10 microg/assay). The ethyl acetate extract showed the strongest level of protection toward the genotoxicity induced by both directly and indirectly genotoxic NF and AFB1. These tests proved that the lyophilized infusion possesses an antiradical activity likewise, it showed no genotoxic effect; that is why we choose this extract to assess its antiulcerogenic activity by using an ethanol-induced ulcerogenesis model in the rat. This test demonstrates that 300 mg/kg of a P. crinita ssp. mauritanica lyophilized infusion was more effective than the reference compound, cimetidine. PMID:19514937

  10. Regional cerebral blood flow in pure dysarthria. A 3D-SSP study

    International Nuclear Information System (INIS)

    Pure dysarthria from brain infarction is a rare condition, and its pathophysiology remains unclear. To clarify the underlying mechanism of pure dysarthria, we investigated the lesion sites and regional cerebral blood flow in patients with pure dysarthria. We examined 18 consecutive patients with pure dysarthria (9 men and 9 women; mean age, 71 years) who underwent MRI and cerebral blood flow studies. To visualize the regional cerebral blood flow, we generated Z score images using the three-dimensional stereotactic surface projection (3D-SSP) method with single-photon emission computed tomography (SPECT) and N-isopropyl-p [123I]iodoamphetamine. Data on the brain surface perfusion extracted by the 3D-SSP analysis were compared between the pure dysarthria (PD) patients and 9 control subjects. MRI revealed multiple lacunar infarctions involving the internal capsule and/or corona radiata in 11 patients, left internal capsule-corona radiata infarction in 4 patients, and pontine infarction in 3 patients. SPECT with 3D-SSP demonstrated bilateral frontal cortical hypoperfusion in all patients, particularly in the anterior opercular region. Based on intergroup comparisons, the PD group exhibited pronounced cortical hypoperfusion in the opercular and medial frontal regions, left more than right. In conclusion, pure dysarthria is considered to originate from frontal cortical hypoperfusion, mainly in the anterior opercular and medial frontal regions, which is probably due to interruption of the corticosubcortical neural networks relevant to speech expression and articulation. In addition, it is suggested that left hemispheric lesions may make a greater contribution to the development of pure dysarthria than do right ones. (author)

  11. Estudo da viabilidade de Bifidobacterium animalis ssp. lactis em suco de Yacon

    OpenAIRE

    Watanabe, Felipe Miguel Farion

    2013-01-01

    Resumo: A maioria dos produtos probióticos são elaborados à base de leite, com desvantagens aos consumidores intolerantes à lactose, tornando assim produtos probióticos não lácteos vantajosos. O yacon é uma planta que acumula em suas raízes compostos prebióticos conhecidos como frutooligossacarídeos. O objetivo deste trabalho foi produzir o suco de yacon e utilizá-lo como matriz não láctea para a bactéria probiótica Bifidobacterium animalis ssp. lactis. O yacon apresentou rápido escurecimento...

  12. Hypoglycemic and Hypolipidemic Effect of Sida rhombifolia ssp. retusa in Diabetic Induced Animals

    OpenAIRE

    Kamlesh Dhalwal; Vaibhav M. Shinde; Bhagat Singh; Kakasaheb R. Mahadik

    2011-01-01

    In the present study, the anti-diabetic effect of aqueous extract of Sida rhombifolia ssp. retusa (Malvaceae) leaves was studied in normal and streptozotocin (STZ)-induced (60 mg/kg, single intraperitoneal injection) diabetic rats. Hypoglycemic activity in normal rats was tested after administration of 200 mg/kg of extract.Aqueous extract showed a 15% reduction in plasma glucose level after 1.5 h of extract administration. When tested in STZ-induced diabetic rats the reduction in pla...

  13. Chemical Composition and Possible in Vitro Phytotoxic Activity of Helichrsyum italicum (Roth Don ssp. italicum

    Directory of Open Access Journals (Sweden)

    Vincenzo De Feo

    2011-09-01

    Full Text Available The chemical composition of the essential oil of Helichrysum italicum (Roth Don ssp. italicum, collected in the National Park of Cilento and Diano Valley, Southern Italy, was studied by means of GC and GC/MS. Forty four compounds of 45 constituents were identified in the oil, mainly oxygenated sesquiterpenes. The essential oil was evaluated for its potential in vitro phytotoxic activity against germination and early radicle elongation of radish and garden cress. The radicle elongation of radish was significantly inhibited at the highest doses tested, while germination of both seeds was not affected.

  14. Chemical composition and possible in vitro phytotoxic activity of Helichrsyum italicum (Roth) Don ssp. italicum.

    Science.gov (United States)

    Mancini, Emilia; De Martino, Laura; Marandino, Aurelio; Scognamiglio, Maria Rosa; De Feo, Vincenzo

    2011-01-01

    The chemical composition of the essential oil of Helichrysum italicum (Roth) Don ssp. italicum, collected in the National Park of Cilento and Diano Valley, Southern Italy, was studied by means of GC and GC/MS. Forty four compounds of 45 constituents were identified in the oil, mainly oxygenated sesquiterpenes. The essential oil was evaluated for its potential in vitro phytotoxic activity against germination and early radicle elongation of radish and garden cress. The radicle elongation of radish was significantly inhibited at the highest doses tested, while germination of both seeds was not affected. PMID:21904272

  15. PENGEMBANGAN SUBJECT SPECIFIC PEDAGOGY (SSP IPA TERPADU UNTUK MENINGKATKAN HASIL BELAJAR SISWA

    Directory of Open Access Journals (Sweden)

    Fitri Yuliawati

    2016-05-01

    Full Text Available Background of this research is the analysis of the results of interviews some junior secondary schools in Yogyakarta and the conclusion that teachers do not use an integrated science teaching and teachers still find difficulties in the application of learning science in an integrated manner. It can be influenced by several factors, such as the lack of reference used by teachers in presenting the material Integrated Science relevantly, most of science teachers are from educational background of chemistry, physics, and biology instead of science education, so that teachers find difficulties to create an integrated learning of science. In addition, teachers feel difficulty in determining the depth of the material, limits of integration in integrated science teaching, and did not know the concept of integrated science teaching. This research is a development research. Learning tools developed included : student books, lesson plans, student activity sheets and evaluation tools. The development of the learning which is done in this study use the models of 4D development which includes the step of Define (definition which at this stage conducted a needs analysis. Design : it is the stage of Subject Specific Pedagogy (SSP software design. Development, it is the stage of development after the draft was made followed by a learning device validation by experts. This stage is also conducted to seek input from all the responses, reactions and comments from teachers, students, and observers so that it can be used for further improvement of science teaching later. The Disseminate, it is the stage of field tests are widely but not done. Data collection instruments used in this study include : test items and questionnaire. The conclusion of this development research are as follows : the results of the validation SSP integrated science by learning tools expert, material experts and media experts indicate the category of Very Good (SB so that SSP integrated

  16. Atrocalopteryx melli orohainani ssp. nov. on the Island of Hainan, China (Zygoptera: Calopterygidae)

    OpenAIRE

    Guan, Z.; Han, B-P; Dumont, Henri

    2012-01-01

    The new sp. is described from the mountain core of Hainan, southern China, where it usually occurs at altitudes not lower than 300 m asl. It lives on the same type of small, shaded rivers as the nominate ssp. on the continent, and is distinguished by its larger size, slightly less enfumed wings, and a 2.6% difference in the sequence of the barcoding portion of the mitochodrial DNA-cytochrome c oxidase subunit I gene (COI). Holotype male: Diaoluoshan mountain, 6-VIII-2011; deposited in the Ins...

  17. Full Scale Test of SSP 34m blade, edgewise loading LTT

    DEFF Research Database (Denmark)

    Nielsen, Magda; Jensen, Find Mølholt; Nielsen, Per Hørlyk;

    This report is a part of the research project “Eksperimentel vingeforskning: Strukturelle mekanismer i nutidens og fremtidens store vinger under kombineret last” where a 34m wind turbine blade from SSP-Technology A/S has been tested in edgewise direction (LTT). The applied load is 60% of an...... unrealistic extreme event, corresponding to 75% of a certificated extreme load. This report describes the background, the test set up, the tests and the results. For this project, a new solution has been used for the load application and the solution for the load application is described in this report as...

  18. ENZYMATIC ACTIVITY AND ANTIBIOTIC RESISTANCE PROFILE OF LACTOBACILLUS PARACASEI SSP. PARACASEI-1 ISOLATED FROM REGIONAL YOGURTS OF BANGLADESH

    Directory of Open Access Journals (Sweden)

    Ummay Honi

    2013-12-01

    Full Text Available Lactobacillus paracasei ssp. paracasei-1 was identified from traditional yogurts of Khulna region, Bangladesh and its enzyme and antibiotic resistance profiles were determined. A commercially available API Zym kit was employed to determine the activities of 19 different enzymes. We found that L. paracasei ssp. paracasei-1 showed strong activities for several enzymes, viz. leucine arylamidase, valine arylamidase, napthol-AS-BI-phosphohydrolase, β-galactosidase, α –Glucosidase, N-Acetyl- β- glucosaminidase while activities for other enzymes were absent. Antibiotic resistance profile was assessed by minimum inhibitory concentration (MIC test for 61 major antibiotics and 4 antifungal agents obtained from commercial sources in MRS Agar media. The strain generally showed resistance to gram negative spectrum antibiotic while it showed susceptibility towards β-lactam antibiotic to gram positive spectrum antibiotic. The findings provide the therapeutic basis of using L. paracasei ssp. paracasei-1 in finished food products.

  19. Étude de l'effet antibactérien des huiles essentielles de Thymus ciliatus ssp coloratus

    OpenAIRE

    HADDOUCHE, Khalida

    2015-01-01

    Etude de l'effet antibactérien de l'huile essentielle de Thymus ciliatus ssp coloratus Résumé Les plantes médicinales constituent une source immense de métabolites secondaires, dont les huiles essentielles dotées de nombreuses activités biologiques ; souvent recherchées dans le domaine phytopharmaceutique et en agro-alimentaire. Le présent travail porte sur une étude qualitative du pouvoir antibactérien de l'huile essentielle de la plante médicinale: Thymus ciliatus ssp c...

  20. The Huygens surface science package (SSP): Flight performance review and lessons learned

    Science.gov (United States)

    Leese, M. R.; Lorenz, R. D.; Hathi, B.; Zarnecki, J. C.

    2012-09-01

    The Surface Science Package (SSP) was one of six instruments flown onboard the Huygens probe to Titan, the largest moon of Saturn, in the framework of the NASA/ESA/ASI Cassini-Huygens mission (Matson et al., 2002). The SSP operated throughout the probe's descent and after landing on Titan on 14th January 2005. This paper reviews scientific results from the Surface Science Package, and also reports previously unpublished flight data which illustrate the performance of the measurement systems in the Titan environment. This review provides some lessons learned that may be useful for further detailed analysis of the Huygens mission data, and for payloads for future missions to Titan, in which there has been recent interest (e.g., the Titan Saturn System Mission (TSSM) (Joint TSSM Science Definition Team, 2009), TANDEM (Coustenis et al., 2009) or the Titan Mare Explorer (TiME) Discovery-class proposal (Stofan et al., 2010)), as well as for planetary probe missions more generally.

  1. The Essential Oil Composition of Tanacetum densum (Labill. Heywood ssp. eginense Heywood from Turkey

    Directory of Open Access Journals (Sweden)

    Kaan Polatoğlu

    2012-07-01

    Full Text Available Water-distilled essential oils from aerial parts of Tanacetum densum (L. Heywood ssp. eginense Heywood, from Turkey was analysed by GC and GC-MS. T. densum ssp. eginense flower, stem and leaf oils were characterized with camphor (30.9% , 25.7%, 27.7%, 1,8-Cineole (12.4% flower oil, camphene (10.6%, %7.0, flower and leaf oils, bornyl acetate, (9.4%, 11.8%, stem and leaf oils, α-pinene (7.0%, %5.3, flower and leaf oils , borneol (5.1%, 5.2%, stem and leaf oils, neodihydrocarveol (5.1%, flower oil. An unidentified compound was also present in flower, stem and leaf oils (11.5%, 27.2%, 20.5%. A comparison is done with the previous investigations on the other subspecies of T. densum and the differences were investigated. Flower and stem oils did not show any significant activity to the tested microorganisms when compared to positive control chloramphenicol. Flower and stem oils both showed cytotoxicity to Vibrio fischeri.

  2. Congenital vestibular disease in captive Sumatran tigers (Panthera tigris ssp. sumatrae) in Australasia.

    Science.gov (United States)

    Wheelhouse, Jaimee L; Hulst, Frances; Beatty, Julia A; Hogg, Carolyn J; Child, Georgina; Wade, Claire M; Barrs, Vanessa R

    2015-11-01

    The Sumatran tiger (Panthera tigris ssp. sumatrae) is a critically endangered species in the wild. To ensure that demographic and genetic integrity are maintained in the longer term, those Sumatran tigers held in captivity are managed as a global population under a World Association of Zoos and Aquariums Global Species Management Plan (GSMP). A retrospective study, including segregation and pedigree analysis, was conducted to investigate potential cases of congenital vestibular disease (CVD) in captive Sumatran tigers in Australasian zoos using medical and husbandry records, as well as video footage obtained from 50 tigers between 1975 and 2013. Data from the GSMP Sumatran tiger studbook were made available for pedigree and segregation analysis. Fourteen cases of CVD in 13 Sumatran tiger cubs and one hybrid cub (Panthera tigris ssp. sumatrae × Panthera tigris) were identified. Vestibular signs including head tilt, circling, ataxia, strabismus and nystagmus were observed between birth and 2 months of age. These clinical signs persisted for a median of 237 days and had resolved by 2 years of age in all cases. Pedigree analysis revealed that all affected tigers were closely related and shared a single common ancestor in the last four generations. A genetic cause for the disease is suspected and, based on pedigree and segregation analysis, an autosomal dominant mode of inheritance is likely. Further investigations to determine the world-wide prevalence and underlying pathology of this disorder are warranted. PMID:26403953

  3. Lactoferrin affects the adherence and invasion of Streptococcus dysgalactiae ssp. dysgalactiae in mammary epithelial cells.

    Science.gov (United States)

    O'Halloran, Fiona; Beecher, Christine; Chaurin, Valerie; Sweeney, Torres; Giblin, Linda

    2016-06-01

    Streptococcus dysgalactiae ssp. dysgalactiae is an important causative agent of bovine mastitis worldwide. Lactoferrin is an innate immune protein that is associated with many functions including immunomodulatory, antiproliferative, and antimicrobial properties. This study aimed to investigate the interactions between lactoferrin and a clinical bovine mastitis isolate, Strep. dysgalactiae ssp. dysgalactiae DPC5345. Initially a deliberate in vivo bovine intramammary challenge was performed with Strep. dysgalactiae DPC5345. Results demonstrated a significant difference in lactoferrin mRNA levels in milk cells between the control and infused quarters 7h postinfusion. Milk lactoferrin levels in the Strep. dysgalactiae DPC5345 infused quarters were significantly increased compared with control quarters at 48h postinfusion. In vitro studies demonstrated that lactoferrin had a bacteriostatic effect on the growth of Strep. dysgalactiae DPC5345 and significantly decreased the ability of the bacteria to internalize into HC-11 mammary epithelial cells. Confocal microscopy images of HC-11 cells exposed to Strep. dysgalactiae and lactoferrin further supported this effect by demonstrating reduced invasion of bacteria to HC-11 cells. The combined data suggest that a bovine immune response to Strep. dysgalactiae infection includes a significant increase in lactoferrin expression in vivo, and based on in vitro data, lactoferrin limits mammary cell invasion of this pathogen by binding to the bacteria and preventing its adherence. PMID:27016824

  4. The Salmonella type III effector SspH2 specifically exploits the NLR co-chaperone activity of SGT1 to subvert immunity.

    Directory of Open Access Journals (Sweden)

    Amit P Bhavsar

    Full Text Available To further its pathogenesis, S. Typhimurium delivers effector proteins into host cells, including the novel E3 ubiquitin ligase (NEL effector SspH2. Using model systems in a cross-kingdom approach we gained further insight into the molecular function of this effector. Here, we show that SspH2 modulates innate immunity in both mammalian and plant cells. In mammalian cell culture, SspH2 significantly enhanced Nod1-mediated IL-8 secretion when transiently expressed or bacterially delivered. In addition, SspH2 also enhanced an Rx-dependent hypersensitive response in planta. In both of these nucleotide-binding leucine rich repeat receptor (NLR model systems, SspH2-mediated phenotypes required its catalytic E3 ubiquitin ligase activity and interaction with the conserved host protein SGT1. SGT1 has an essential cell cycle function and an additional function as an NLR co-chaperone in animal and plant cells. Interaction between SspH2 and SGT1 was restricted to SGT1 proteins that have NLR co-chaperone function and accordingly, SspH2 did not affect SGT1 cell cycle functions. Mechanistic studies revealed that SspH2 interacted with, and ubiquitinated Nod1 and could induce Nod1 activity in an agonist-independent manner if catalytically active. Interestingly, SspH2 in vitro ubiquitination activity and protein stability were enhanced by SGT1. Overall, this work adds to our understanding of the sophisticated mechanisms used by bacterial effectors to co-opt host pathways by demonstrating that SspH2 can subvert immune responses by selectively exploiting the functions of a conserved host co-chaperone.

  5. Chemical composition and antifungal activities of essential oils of Satureja thymbra L. and Salvia pomifera ssp. calycina (Sm.) Hayek

    NARCIS (Netherlands)

    Glamoclija, J.; Sokovic, M.; Vukojevic, J.; Milenkovic, I.; Griensven, van L.J.L.D.

    2006-01-01

    This work covers the chemical composition and antifungal activities of essential oils isolated from savory (Satureja thymbra) and sage (Salvia pomifera ssp. calycina) analyzed using GC/MS. The main components of S. thymbra oil were gamma-terpinene (23.2%) and carvacrol (48.5%). The main components i

  6. Impact of Acacia tortilis ssp. raddiana tree on wheat and barley yield in the south of Tunisia

    Science.gov (United States)

    Noumi, Zouhaier; Abdallah, Fathia; Torre, Franck; Michalet, Richard; Touzard, Blaise; Chaieb, Mohamed

    2011-03-01

    In the past, Acacia tortilis ssp. raddiana (Savi) Brenan colonised thousands of hectares in central and southern Tunisia. Nowadays, the geographical distribution of A. tortilis ssp. raddiana is restricted to the National Park of Bou-Hedma (central Tunisia). The Acacia is of considerable interest for local populations and may be considered as a "foundation species" under arid climate. This study examines the effects of Acacia canopy on soil fertility and cereal productivity. The improvement in soil fertility and microclimate provided by A. tortilis ssp. raddiana is known to facilitate the establishment of new species, but little is known about the interaction between the tree species and the cereals cultivated by local farmers. We studied the effect of A. tortilis ssp. raddiana canopy on the yield of three cereals crops ( Hordeum vulgare L., Triticum sativum L. and Triticum aestivum L.). We seeded 168 plots (15 × 15 m) under the tree canopy and in open areas on four different landform types (glacis, plain, wadis, and jessours) and measured cereal yield over two contrasting years (wet and dry). We found that: (1) precipitation and geomorphology are more important in determining cereal yield than canopy cover, (2) these effects on water availability are species-specific with no effect on the stress-tolerant barley. We finally discuss the potential negative effects of Acacia trees which may have balanced the positive effects found for nutrient in our study.

  7. Note on Celastrus paniculatus Willd. ssp. aggregatus K.M. Matthew ex K.T. Matthew (Celastraceae

    Directory of Open Access Journals (Sweden)

    J.W. Francis

    2012-12-01

    Full Text Available Celastrus L., a large genus of family Celastraceae, is represented by ca 31 species in the world. In India the genus is represented by seven species and one subspecies. This paper deals with addition of Celastrus paniculatus ssp. aggregatus to the flora of Andhra Pradesh, Kerala, Goa and Andaman Islands. A note on its distribution is also provided in this paper.

  8. Introgression of genetic material from Zea mays ssp. Mexicana into cultivated maize was facilitated by tissue culture

    International Nuclear Information System (INIS)

    Zea mays ssp. mexicana, a wild relative of cultivated maize (Z. mays ssp. mays), is a useful gene resource for maize breeding. In this study, two populations were generated by conventional breeding scheme (population I) or tissue culture regime (population II), respectively, to introgress genetic material of Z. mays ssp. mexicana into maize. Karyotype analysis showed that the arm ratios of 10 pairs of chromosomes in parent maize Ye515 and derivative lines from 2 different populations with 26% and 38% chromosome variation frequencies, respectively. Alien chromatin was detected in the root tip cells of progeny plants through genomic in situ hybridization (GISH). There were 3.3 chromosomes carrying alien chromatin on average in population I and 6.5 in population II. The hybridization signals were located mainly at the terminal or sub terminal regions of the chromosomes and the sizes were notably variant among lines. Based on those results, it is concluded that the introgression of genetic material from Z. mays ssp. mexicana into cultivated maize was facilitated by tissue culture, and subsequently some excellent materials for maize breeding were created. (author)

  9. CITOGENETICS EFFECTS INDUCED BY THE ASCORBIC ACID TREATMENT OF LARIX DECIDUA MILL. SSP. CARPATICA AND PICEA ABIES (L. KARST

    Directory of Open Access Journals (Sweden)

    Ioana Ieremia

    2006-08-01

    Full Text Available The paper present the influence of ascorbic acid upon the mitotic division of Larix decidua Mill ssp. carpatica and Picea abies (L. Karst. The treatment is applied of two variants, germinated seed in ascorbic acid (variantAand germinated seeds in disttilate water, than treated with ascorbic acid in 3 concentrations (variant B.

  10. A black, non-troglomorphic amphibian from the karst of Slovenia: Proteus anguinus parkelj n. ssp. (Urodela: Proteidae)

    NARCIS (Netherlands)

    Sket, B.; Arntzen, J.W.

    1994-01-01

    A morphologically distinct cavernicolous salamander Proteus anguinus from southeastern Slovenia (Bela Krajina) is described as P. a. parkelj ssp. n. It differs from P. a. anguinus in a dark pigmentation, fully developed eyes, a skull with broader and shorter bones and fewer teeth, a voluminous jaw m

  11. Heterologous Expression and Characterization of an N-Acetyl-beta-D-hexosaminidase from Lactococcus lactis ssp. lactis IL1403

    Czech Academy of Sciences Publication Activity Database

    Nguyen, A. H.; Nguyen, T.-H.; Křen, Vladimír; Eijsink, V. G. H.; Haltrich, D.; Peterbauer, C.

    2012-01-01

    Roč. 60, č. 12 (2012), s. 3275-3281. ISSN 0021-8561 R&D Projects: GA ČR(CZ) GAP207/11/0629 Keywords : N-acetyl-beta-D-hexosaminidase * Lactococcus lactis ssp lactis IL1403 * pNP-GlcNAc Subject RIV: CE - Biochemistry Impact factor: 2.906, year: 2012

  12. Mycoplasma hominis ssp. associated endocarditis with myocardial necrosis in an alpaca (Vicugna pacos) in Manitoba in 2011

    Science.gov (United States)

    Tomczyk, Krzysztof M.; Copeland, Shelagh; Postey, Rosemary; Ngeleka, Musangu

    2015-01-01

    Severe endocarditis with myonecrosis, moderate to severe pleural and pericardial effusions, and mild ascites were found on necropsy in 3 alpacas. Mycoplasma hominis ssp. was detected on polymerase chain reaction (PCR) of fresh affected endocardial tissue in 1 alpaca. PMID:25694661

  13. Combining ability for maturity and plant height in brassica rapa (l.) ssp. dichotoma (roxb.) hanelt

    International Nuclear Information System (INIS)

    A 5 * 5 F1 diallel cross hybrids of Brassica rapa (L.) ssp. dichotoma (Roxb.) Hanelt along with parents were evaluated through combining ability for days to flowering (initiation and completion), days to maturity and plant height. Highly significant differences were recorded for all the traits. Mean squares due to general, specific and reciprocal combining ability were significant for all the traits except plant height for which the latter two components were non-significant. Prevalence of additive (plant height), non-additive (days to flowering completion; days to maturity) and reciprocal effects (days to flowering initiation) were detected. Parental line G-403 was best general combiner for all the traits. The F1 hybrids G-902 * G-265 (days to flowering initiation), G-902 * G-403 (days to flowering completion), G-265 * G-1500 (days to maturity) and G-909 * G-265 (plant height) were superior and may be exploited for future breeding programs. (author)

  14. Herbaspirillum sp. strain GW103 alleviates salt stress in Brassica rapa L. ssp. pekinensis.

    Science.gov (United States)

    Lee, Gun Woong; Lee, Kui-Jae; Chae, Jong-Chan

    2016-05-01

    Mutual interactions between plant and rhizosphere bacteria facilitate plant growth and reduce risks of biotic and abiotic stresses. The present study demonstrates alleviation of salt stress in Brassica rapa L. ssp. perkinensis (Chinese cabbage) by Herbaspirillum sp. strain GW103 isolated from rhizosphere soil of Phragmites australis. The strain was capable of producing plant beneficial factors, such as auxin, siderophore, and 1-aminocylopropane-1-carboxylic acid deaminase. Treatment of strain GW103 on Chinese cabbage under salt stress increased K(+)/Na(+) ratio in roots generating balance in the ratio of ion homeostasis and consequently contributed to the increase of biomass. In addition, root colonization potential of the strain was observed by green fluorescent protein (GFP)-tagging approach. These results strongly suggest the beneficial impact of strain GW103 by inducing the alleviation of salt stress and development of stress tolerance in Chinese cabbage via plant-microbe interaction. PMID:26358119

  15. Antioxidant capacities and polyphenolics of Chinese cabbage (Brassica rapa L. ssp. Pekinensis) leaves.

    Science.gov (United States)

    Seong, Gi-Un; Hwang, In-Wook; Chung, Shin-Kyo

    2016-05-15

    Chinese cabbage (Brassica rapa L. ssp. Pekinensis) is a green leafy vegetable used mainly in kimchi, salted and fermented dishes. Consumer preference for the leaf portion differs according to the type of dishes. In this study, Chinese cabbage was divided into three parts, and their antioxidant activities were investigated through in vitro assays. The total phenolic contents (TPC), total flavonoid contents (TFC), and vitamin C contents were also determined as indicators of antioxidant contents. The phenolic acids and flavonoids were separated and identified using high performance liquid chromatography (HPLC) and liquid chromatography/mass spectrometry (LC/MS). The outer leaf had the strongest antioxidant activity with the maximum antioxidant contents, followed by the mid- and inner leaves. Principal component analysis (PCA) revealed that outer leaf is positively related to caffeic acid, p-coumaric acid, ferulic acid, and myricetin contents, whereas the mid- and inner leaves are negatively related to sinapic acid contents. PMID:26776015

  16. Correction of the structure of a new sesquiterpene from Cistus creticus ssp. creticus.

    Science.gov (United States)

    Hatzellis, Konstantinos; Pagona, Georgia; Spyros, Apostolos; Demetzos, Costas; Katerinopoulos, Haralambos E

    2004-12-01

    In an attempt to identify the structure of a sesquiterpene from Cistus creticus ssp. creticus proposed in the literature as 1,1,4a,6-tetramethyl-5-methylene-1,2,3,4,4alpha,5,8,8alpha-octahydronaphthalene, the synthesis of its cis isomer 2 was carried out in 11 steps and 9.5% yield. Comparison of the spectra of 2 and those reported earlier for the synthetic trans isomer 1 with the spectral profile of the isolated natural product indicated that the latter was not compatible with either 1 or 2. The correct structure was assigned, by detailed spectroscopic analysis of the natural product, as 6-isopropenyl-4,4a-dimethyl-1,2,3,4,4a,5,6,7-octahydronaphthalene (3). PMID:15620240

  17. The identification of MacSe in Streptococcus equi ssp. equi

    Institute of Scientific and Technical Information of China (English)

    Jiande YANG; Yanfei LIU; Jun XU; Jifei MA

    2009-01-01

    Streptococcus equi subsp, equi (S. equi ssp. equi) causes equine strangles, a highly contagious and widespread purulent lymphadenitis of the head and neck. We have identified MacSe, a novel protein of S. equi, by screening a phage library of 3-8 kb random DNA fragments of S. equi CF32. MacSe shares 62% and 67.5% amino acid homology with Mac5005 and Mac8345 of S. pyogenes respectively. Expression during infection was shown by strong reactivity of the protein with convalescent sera and mucosal wash IgA of ponies infected by commingling exposure. Release into the culture medium was detected during the log phase of growth. Dose dependent anti-phagocytic activity for equine neutrophils involved interaction of MacSe with C3 and neutrophils.

  18. Sesquiterpene Lactones of Amphoricarpos autariatus ssp. autariatus from Montenegro - Antifungal Leaf - Surface Constituents

    Directory of Open Access Journals (Sweden)

    Milka Jadranin

    2013-05-01

    Full Text Available The composition of leaf cuticular neutral lipids of Amphoricarpos autariatus ssp. autariatus collected at canyon of river Tara (North Montenegro was investigated by GC/MS (nonpolar fraction, LC-ESI TOF MS and 1H NMR spectroscopy (more polar fraction. The nonpolar fraction (ca. 15% of the whole surface extract contained C 27 - 33 n-alkanes, those with odd-number of carbons predominating. The LC-ESI MS and 1H NMR of the more polar fraction revealed 13 sesquiterpene lactones, constituting ca. 97.5% of the lactone mixture, identified as the known guaianolides, so-called amphoricarpolides, found previously in the aerial parts of the genus. The lactone fraction exhibited considerable in vitro effect against eight fungi, i.e. Aspergillus ochraceus , A. niger, A. versicolor , Penicillium funiculosum, P. ochrochloron, Trichoderma viride, Fusarium verticillioides and Fulvia fulvum.

  19. Full scale test SSP 34m blade, combined load. Data report

    Energy Technology Data Exchange (ETDEWEB)

    Nielsen, Per H.; Nielsen, Magda; Jensen, Find M. (and others)

    2010-11-15

    This report is part of the research project where a 34m wind turbine blade from SSP-Technology A/S was tested in combined flap and edgewise load. The applied load is 55% of an imaginary extreme event based on the certification load of the blade. This report describes the reason for choosing the loads and the load direction and the method of applying the loads to the blade. A novel load introduction allows the blade to deform in a more realistic manner, allowing the observation of e.g. transverse shear distortion. The global and local deformation of the blade as well as the blades' respond to repeated tests has been studied and the result from these investigations are presented, including the measurements performed. (Author)

  20. Space Shuttle Program (SSP) Shock Test and Specification Experience for Reusable Flight Hardware Equipment

    Science.gov (United States)

    Larsen, Curtis E.

    2012-01-01

    As commercial companies are nearing a preliminary design review level of design maturity, several companies are identifying the process for qualifying their multi-use electrical and mechanical components for various shock environments, including pyrotechnic, mortar firing, and water impact. The experience in quantifying the environments consists primarily of recommendations from Military Standard-1540, Product Verification Requirement for Launch, Upper Stage, and Space Vehicles. Therefore, the NASA Engineering and Safety Center (NESC) formed a team of NASA shock experts to share the NASA experience with qualifying hardware for the Space Shuttle Program (SSP) and other applicable programs and projects. Several team teleconferences were held to discuss past experience and to share ideas of possible methods for qualifying components for multiple missions. This document contains the information compiled from the discussions

  1. VizieR Online Data Catalog: SSP in NIR. II. Synthesis models (Meneses-Goytia+, 2015)

    Science.gov (United States)

    Meneses-Goytia, S.; Peletier, R. F.; Trager, S. C.; Vazdekis, A.

    2015-08-01

    The present Single Stellar Populations (SSP) models are derived from my Ph.D.'s thesis and this paper. The following nomenclature is used throughout the paper and the website (http://smg.astro-research.net/ssp-models/the-models/) to describe the models, e.g. MarS models use the M08 isochrones (Mar) and the Salpeter (S) IMF. General information about the models is given in table1. For further information, please refer to the paper. Each set of models and their corresponding predictions are available in the website and VIZIER. The spectral energy distributions (SEDs) can be downloaded in a zip-file from those pages in ascii format . The spectral energy distributions (SEDs) can be downloaded in a zip-file from t hose pages in ascii format . The nomenclature of each SED is as follows: isochroneIMFsedXXXXHZX.XXXXXXXXXTgXX.XXXXXXXe+XX - where XXXX tells whether those models contain C-stars or no (COMBO or NOCS respectively) H is the spectral band in which normalization occurred Z_X.XXXXXXXXX is the metallicity in terms of Z Tg_XX.XXXXXXXe+XX is the age in years. Each set of models contains MarS - 96 SEDs GirS - 96 SEDs BaSS - 116 SEDs We have also included in the websites the Integrated colours and line-strength indices from all our models (MarS, GirS and BaSS). The SEDs were convolved to a velocity dispersion of 350km/s before calculating indices. (5 data files).

  2. Whole Genome Sequences of Three Treponema pallidum ssp. pertenue Strains: Yaws and Syphilis Treponemes Differ in Less than 0.2% of the Genome Sequence

    OpenAIRE

    Čejková, Darina; Zobaníková, Marie; Chen, Lei; Pospíšilová, Petra; Strouhal, Michal; Qin, Xiang; Mikalová, Lenka; Norris, Steven J.; Muzny, Donna M; Gibbs, Richard A.; Fulton, Lucinda L.; Sodergren, Erica; Weinstock, George M.; Šmajs, David

    2012-01-01

    Background The yaws treponemes, Treponema pallidum ssp. pertenue (TPE) strains, are closely related to syphilis causing strains of Treponema pallidum ssp. pallidum (TPA). Both yaws and syphilis are distinguished on the basis of epidemiological characteristics, clinical symptoms, and several genetic signatures of the corresponding causative agents. Methodology/Principal Findings To precisely define genetic differences between TPA and TPE, high-quality whole genome sequences of three TPE strain...

  3. Generation and characterization of Brassica rapa ssp. pekinensis – B. oleracea var. capitata monosomic and disomic alien addition lines

    Indian Academy of Sciences (India)

    Ai xia Gu; Shu Xing Shen; Yan Hua Wang; Jian Jun Zhao; Shu Xin Xuan; Xue Ping Chen; Xiao Feng Li; Shuang Xia Luo; Yu Jing Zhao

    2015-09-01

    Five monosomic alien addition lines (MAALs) of Brassica rapa ssp. pekinensis – B. oleracea var. capitata were obtained by hybridization and backcrossing between B. rapa ssp. pekinensis (female parent) and B. oleracea var. capitata. The alien linkage groups were identified using 42 B. oleracea var. capitata linkage group-specific markers as B. oleracea linkage groups C2, C3, C6, C7 and C8. Based on the chromosomal karyotype of root tip cells, these five MAALs added individual chromosomes from B. oleracea var. capitata: chr 1 (the longest), chr 2 or 3, chr 5 (small locus of 25S rDNA), chr 7 (satellite-carrying) and chr 9 (the shortest). Five disomic alien addition lines were then generated by selfing their corresponding MAALs.

  4. Computer-assisted diagnostic system for neurodegenerative dementia using brain SPECT and 3D-SSP

    Energy Technology Data Exchange (ETDEWEB)

    Ishii, Kazunari; Kanda, Tomonori; Uemura, Takafumi; Miyamoto, Naokazu; Yoshikawa, Toshiki [Hyogo Brain and Heart Center, Department of Radiology and Nuclear Medicine, Himeji, Hyogo (Japan); Shimada, Kenichi; Ohkawa, Shingo [Hyogo Brain and Heart Center, Institute for Aging Brain and Cognitive Disorders, Himeji, Hyogo (Japan); Minoshima, Satoshi [University of Washington, Radiology and Bioengineering, Department of Radiology, Seattle, WA (United States)

    2009-05-15

    To develop a computer-assisted automated diagnostic system to distinguish among Alzheimer disease (AD), dementia with Lewy bodies (DLB), and other degenerative disorders in patients with mild dementia. Single photon emission computed tomography (SPECT) images with injection of N-Isopropyl-p-[{sup 123}I]iodoamphetamine (IMP) were obtained from patients with mild degenerative dementia. First, datasets from 20 patients mild AD, 15 patients with dementia with DLB, and 17 healthy controls were used to develop an automated diagnosing system based on three-dimensional stereotactic surface projections (3D-SSP). AD- and DLB-specific regional templates were created using 3D-SSP, and critical Z scores in the templates were established. Datasets from 50 AD patients, 8 DLB patients, and 10 patients with non-AD/DLB type degenerative dementia (5 with frontotemporal dementia and 5 with progressive supranuclear palsy) were then used to test the diagnostic accuracy of the optimized automated system in comparison to the diagnostic interpretation of conventional IMP-SPECT images. These comparisons were performed to differentiate AD and DLB from non-AD/DLB and to distinguish AD from DLB. A receiver operating characteristic (ROC) analysis was performed. The area under the ROC curve (Az) and the accuracy of the automated diagnosis system were 0.89 and 82%, respectively, for AD/DLB vs. non-AD/DLB patients, and 0.70 and 65%, respectively, for AD vs. DLB patients. The mean Az and the accuracy of the visual inspection were 0.84 and 77%, respectively, for AD/DLB vs. non-AD/DLB patients, and 0.70 and 65%, respectively, for AD vs. DLB patients. The mean Az and the accuracy of the combination of visual inspection and this system were 0.96 and 91%, respectively, for AD/DLB vs. non-AD/DLB patients, and 0.70 and 66%, respectively, for AD vs. DLB patients. The system developed in the present study achieved as good discrimination of AD, DLB, and other degenerative disorders in patients with mild

  5. Engineering and Safety Partnership Enhances Safety of the Space Shuttle Program (SSP)

    Science.gov (United States)

    Duarte, Alberto

    2007-01-01

    Project Management must use the risk assessment documents (RADs) as tools to support their decision making process. Therefore, these documents have to be initiated, developed, and evolved parallel to the life of the project. Technical preparation and safety compliance of these documents require a great deal of resources. Updating these documents after-the-fact not only requires substantial increase in resources - Project Cost -, but this task is also not useful and perhaps an unnecessary expense. Hazard Reports (HRs), Failure Modes and Effects Analysis (FMEAs), Critical Item Lists (CILs), Risk Management process are, among others, within this category. A positive action resulting from a strong partnership between interested parties is one way to get these documents and related processes and requirements, released and updated in useful time. The Space Shuttle Program (SSP) at the Marshall Space Flight Center has implemented a process which is having positive results and gaining acceptance within the Agency. A hybrid Panel, with equal interest and responsibilities for the two larger organizations, Safety and Engineering, is the focal point of this process. Called the Marshall Safety and Engineering Review Panel (MSERP), its charter (Space Shuttle Program Directive 110 F, April 15, 2005), and its Operating Control Plan emphasizes the technical and safety responsibilities over the program risk documents: HRs; FMEA/CILs; Engineering Changes; anomalies/problem resolutions and corrective action implementations, and trend analysis. The MSERP has undertaken its responsibilities with objectivity, assertiveness, dedication, has operated with focus, and has shown significant results and promising perspectives. The MSERP has been deeply involved in propulsion systems and integration, real time technical issues and other relevant reviews, since its conception. These activities have transformed the propulsion MSERP in a truly participative and value added panel, making a

  6. Computer-assisted diagnostic system for neurodegenerative dementia using brain SPECT and 3D-SSP

    International Nuclear Information System (INIS)

    To develop a computer-assisted automated diagnostic system to distinguish among Alzheimer disease (AD), dementia with Lewy bodies (DLB), and other degenerative disorders in patients with mild dementia. Single photon emission computed tomography (SPECT) images with injection of N-Isopropyl-p-[123I]iodoamphetamine (IMP) were obtained from patients with mild degenerative dementia. First, datasets from 20 patients mild AD, 15 patients with dementia with DLB, and 17 healthy controls were used to develop an automated diagnosing system based on three-dimensional stereotactic surface projections (3D-SSP). AD- and DLB-specific regional templates were created using 3D-SSP, and critical Z scores in the templates were established. Datasets from 50 AD patients, 8 DLB patients, and 10 patients with non-AD/DLB type degenerative dementia (5 with frontotemporal dementia and 5 with progressive supranuclear palsy) were then used to test the diagnostic accuracy of the optimized automated system in comparison to the diagnostic interpretation of conventional IMP-SPECT images. These comparisons were performed to differentiate AD and DLB from non-AD/DLB and to distinguish AD from DLB. A receiver operating characteristic (ROC) analysis was performed. The area under the ROC curve (Az) and the accuracy of the automated diagnosis system were 0.89 and 82%, respectively, for AD/DLB vs. non-AD/DLB patients, and 0.70 and 65%, respectively, for AD vs. DLB patients. The mean Az and the accuracy of the visual inspection were 0.84 and 77%, respectively, for AD/DLB vs. non-AD/DLB patients, and 0.70 and 65%, respectively, for AD vs. DLB patients. The mean Az and the accuracy of the combination of visual inspection and this system were 0.96 and 91%, respectively, for AD/DLB vs. non-AD/DLB patients, and 0.70 and 66%, respectively, for AD vs. DLB patients. The system developed in the present study achieved as good discrimination of AD, DLB, and other degenerative disorders in patients with mild dementia

  7. 8th International Conference on Solid State Physics (SSP 2004), Workshop “Mössbauer Spectroscopy of Locally Heterogeneous Systems”

    CERN Document Server

    Kadyrzhanov, K. K; SSP 2004

    2006-01-01

    This volume contains papers presented at the 8th International Conference on Solid State Physics (SSP 2004), Workshop "Mössbauer Spectroscopy of Locally Heterogeneous Systems", held in Almaty, Kazakhstan, 23–26 August 2004. It should be of interest to researchers and PhD students working or interested in recent results in the locally inhomogeneous system investigations by Mössbauer Spectroscopy and the new concepts of data evaluation of complex Mössbauer spectra.

  8. Overcoming interspecific incompatibility in the cross Brassica campestris ssp. japonica x Brassica oleracea var. botrytis using irradiated mentor pollen page

    International Nuclear Information System (INIS)

    The cross B. campestris ssp. japonica x B. oleracea var. botrytis fails due to incompatibility barrier at the stigma. To realize this cross, irradiated compatible pollen (mentor pollen) was used before the incompatible pollination. The presence of mentor pollen stimulated the incompatible pollen to germinate and effect fertilization and seed set. One hybrid was thus obtained. Most of the seeds were inviable. Of the 5 plants raised one was a hybrid and 4 resembled the female parent. 1 tab., 7 refs

  9. Application of a Simple In-House PCR-SSP Technique for HLA-B* 27 Typing in Spondyloarthritis Patients

    OpenAIRE

    Parasannanavar, Devraj J.; Anjali Rajadhyaksha; Kanjaksha Ghosh

    2013-01-01

    Background. Microlymphocytotoxicity (MLCT) and flowcytometry (FC) are the conventional serological methods to detect HLA-B* 27. Due to some disadvantages in these methods, most of the HLA laboratories have now switched over to molecular methods. Molecular techniques based on commercial kits are expensive; as such many laboratories with limited funds in developing countries cannot afford these techniques. Aims. Our main aim was to standardize a simple inexpensive in-house PCR-SSP technique for...

  10. The effect of 5,6-dimethylbenzimidazole on vitamin B12 synthesis and protein production in Propionibacterium freudenreichii ssp. freudenreichii

    OpenAIRE

    Ishchenko, Tatiana

    2014-01-01

    Propionibacterium freudenreichii is commonly known as a Swiss-type cheese ripening culture, and is also frequently applied in the industrial production of vitamin B12 (cobalamin). One way to increase vitamin B12 productivity is the supplementation of medium with 5,6-dimethylbenzimidazole (DMBI), the lower ligand of cobalamin. The aim of this thesis was to investigate the effect of exogenous DMBI on vitamin B12 synthesis and protein production in type strain of P. freudenreichii ssp. freudenre...

  11. Conservation of nuclear SSR loci reveals high affinity of Quercus infectoria ssp. veneris A. Kern (Fagaceae) to section Robur

    OpenAIRE

    Neophytou, Charalambos; Dounavi, Aikaterini; Aravanopoulos, Filippos A.

    2013-01-01

    Conservation of 16 nuclear microsatellite loci, originally developed for Quercus macrocarpa (section Albae), Q. petraea, Q. robur (section Robur) and Q. myrsinifolia, (subgenus Cyclobalanopsis) was tested in a Q. infectoria ssp. veneris population from Cyprus. All loci could be amplified successfully and displayed allele size and diversity patterns that match those of oak species belonging to the section Robur. At least in one case, limited amplification and high levels of homozygosity suppor...

  12. Cu,Cr and As determination in preserved woods (Eucalyptus ssp.) by X-ray fluorescence spectrometries

    International Nuclear Information System (INIS)

    Brazil produces around 2.2 millions of cubic meters of treated wood to meet the annual demand of railway, electric, rural and construction sectors. The most used wood species are eucalyptus (Eucalyptus ssp.) and pine (Pinus ssp.).The treated woods used for poles, sleepers, fence posts and plywoods should be according to Brazilian norms requirements. The most usual wood preservative products used in Brazil are CCA (chromated copper arsenate) and CCB (copper chromium and boron salt). The analytical methods, such as flame atomic absorption spectrometry (FAAS), plasma inductively coupled optical emission spectrometry (ICPOES) and X-ray fluorescence spectrometry (XRFS) have been used for the analytical control of those treatment processes. In this work, the eucalyptus trees (Eucalyptus ssp) samples was obtained from Minas Gerais State, Brazil, cut plantation areas. Under pressure, eucalyptus wood samples were submitted to different concentration of CCA solution reaching 3.9, 6.7, 9.1, 12.4 and 14.0 kg of CCA by m-³ sapwood retentions. Samples in cylinders and sawdust forms were obtained from treated wood samples. Copper, chromium and arsenic determination was performed using the energy dispersive X-ray fluorescence spectrometry (EDXRFS), portable X-ray fluorescence spectrometry (PXRFS), flame atomic absorption spectrometry (FAAS) and instrumental neutron activation analysis. In this work, the method of analysis, sensitivity, precision and accuracy performances of the related techniques were outlined. (author)

  13. Influence of different strains of Agrobacterium rhizogenes on induction of hairy roots and lignan production in Linum tauricum ssp. tauricum

    Directory of Open Access Journals (Sweden)

    Iliana Ionkova

    2009-01-01

    Full Text Available Hairy root cultures were induced from leaf explants of Linum tauricum ssp. Tauricum by infection with Agrobacterium rhizogenes. Different bacterial strains of Agrobacterium rhizogenes - TR 105 and ATCC 15834 were evaluated for induction of transformed hairy roots in Linum tauricum ssp. Tauricum. These different strains varied in their virulence for induction of hairy roots in this species. Acetosyringon in cultivation medium was used to increase of frequency of hairy root induction. Growth kinetics of transgenic roots indicated a similar pattern of growth, with maximum growth occurring between 17 and 20 days. The transformed nature of tissue was confirmed by the production of opines. The lignin production of different clones was found to be growth-related. The cultures produced to 2.6% of the lignin 4′-demethyl-6-methoxypodophylotoxin (4′-DM-MPTOX and to 3.5% of the lignin 6-methoxypodophyllotoxin (6MPTOX on a dry weight basis, which was 10 to 12 times higher than in Linum tauricum ssp. Tauricum cell suspensions. Transformed cultures showed significant differences in lignin content. The highest amount of 4′-DM-MPTOX and MPTOX was found in transformed line induced by strain ATCC 15834. Rapidly growing root lines were selected to increase the efficiency of he production of lignans.

  14. A crystallizable form of the Streptococcus gordonii surface antigen SspB C-domain obtained by limited proteolysis

    International Nuclear Information System (INIS)

    The C-terminal domain of the S. gordonii surface protein SspB has been expressed, purified and crystallized. Diffraction data have been collected to 2.1 Å resolution. SspB is a 1500-residue adhesin expressed on the surface of the oral bacterium Streptococcus gordonii. Its interaction with other bacteria and host cells initiates the development of dental plaque. The full-length C-terminal domain of SspB was cloned, overexpressed in Escherichia coli and purified. However, the protein could not be crystallized. Limited proteolysis of the full-length C-domain identified a core fragment. The proteolysis product was cloned, expressed and purified. The protein was crystallized using the hanging-drop vapour-diffusion method. X-ray data were collected and processed to a maximum resolution of 2.1 Å with 96.4% completeness. The crystals belonged to space group P21, with one molecule in the asymmetric unit, a solvent content of 33.7% and a corresponding Matthews coefficient of 1.85 Å3 Da−1

  15. Comparative Transcriptome Analysis Reveals Heat-Responsive Genes in Chinese Cabbage (Brassica rapa ssp. chinensis)

    Science.gov (United States)

    Wang, Aihua; Hu, Jihong; Huang, Xingxue; Li, Xia; Zhou, Guolin; Yan, Zhixiang

    2016-01-01

    Chinese cabbage (Brassica rapa ssp. chinensis) is an economically and agriculturally significant vegetable crop and is extensively cultivated throughout the world. Heat stress disturbs cellular homeostasis and causes visible growth inhibition of shoots and roots, severe retardation in growth and development, and even death. However, there are few studies on the transcriptome profiling of heat stress in non-heading Chinese cabbage. In this study, we investigated the transcript profiles of non-heading Chinese cabbage from heat-sensitive and heat-tolerant varieties “GHA” and “XK,” respectively, in response to high temperature using RNA sequencing (RNA seq). Approximately 625 genes were differentially expressed between the two varieties. The responsive genes can be divided into three phases along with the time of heat treatment: response to stimulus, programmed cell death and ribosome biogenesis. Differentially expressed genes (DEGs) were identified in the two varieties, including transcription factors (TFs), kinases/phosphatases, genes related to photosynthesis and effectors of homeostasis. Many TFs were involved in the heat stress response of Chinese cabbage, including NAC069 TF which was up-regulated at all the heat treatment stages. And their expression levels were also validated by quantitative real-time-PCR (qRT-PCR). These candidate genes will provide genetic resources for further improving the heat-tolerant characteristics in non-heading Chinese cabbage. PMID:27443222

  16. Complete genome sequence of Treponema pallidum ssp. pallidum strain SS14 determined with oligonucleotide arrays

    Directory of Open Access Journals (Sweden)

    Sodergren Erica

    2008-05-01

    Full Text Available Abstract Background Syphilis spirochete Treponema pallidum ssp. pallidum remains the enigmatic pathogen, since no virulence factors have been identified and the pathogenesis of the disease is poorly understood. Increasing rates of new syphilis cases per year have been observed recently. Results The genome of the SS14 strain was sequenced to high accuracy by an oligonucleotide array strategy requiring hybridization to only three arrays (Comparative Genome Sequencing, CGS. Gaps in the resulting sequence were filled with targeted dideoxy-terminators (DDT sequencing and the sequence was confirmed by whole genome fingerprinting (WGF. When compared to the Nichols strain, 327 single nucleotide substitutions (224 transitions, 103 transversions, 14 deletions, and 18 insertions were found. On the proteome level, the highest frequency of amino acid-altering substitution polymorphisms was in novel genes, while the lowest was in housekeeping genes, as expected by their evolutionary conservation. Evidence was also found for hypervariable regions and multiple regions showing intrastrain heterogeneity in the T. pallidum chromosome. Conclusion The observed genetic changes do not have influence on the ability of Treponema pallidum to cause syphilitic infection, since both SS14 and Nichols are virulent in rabbit. However, this is the first assessment of the degree of variation between the two syphilis pathogens and paves the way for phylogenetic studies of this fascinating organism.

  17. Effects of amendments on the uptake and distribution of DDT in Cucurbita pepo ssp pepo plants

    Energy Technology Data Exchange (ETDEWEB)

    Whitfield Aslund, Melissa L.; Lunney, Alissa I. [Department of Chemistry and Chemical Engineering, Royal Military College of Canada, Kingston, ON, K7K 7B4 (Canada); Rutter, Allison [School of Environmental Studies, Biosciences Complex, Queen' s University, Kingston, ON, K7L 3N6 (Canada); Zeeb, Barbara A., E-mail: zeeb-b@rmc.c [Department of Chemistry and Chemical Engineering, Royal Military College of Canada, Kingston, ON, K7K 7B4 (Canada)

    2010-02-15

    The effects of soil amendments on the phytoextraction of SIGMADDT (DDT + DDD + DDE) from soil ([SIGMADDT] approx 1500 ng/g) by a pumpkin variety of Cucurbita pepo ssp pepo were tested and the patterns of SIGMADDT storage throughout the plant shoot were examined. The soil amendments did not increase the total amount of SIGMADDT extracted into plant shoots, but new information about SIGMADDT distribution in the plants was obtained. As observed previously, the SIGMADDT concentration in plant leaves (mean 290 ng/g) was significantly lower than in plant stems (mean 2600 ng/g). Further analysis revealed that SIGMADDT composition was consistent throughout the plant shoot and that SIGMADDT concentration in leaves and stems decreased exponentially as distance from the root increased, which was previously unknown. This new information about the patterns of SIGMADDT uptake and translocation within pumpkin plants highlights the need for appropriate plant sampling strategies in future POPs phytoextraction research. - Patterns of SIGMADDT storage in a pumpkin plant are elucidated and specific surfactant and mycorrhizal soil amendments did not increase the total amount of SIGMADDT phytoextracted into plant shoots.

  18. RAPID HLA-DRB1 GENERIC TYPING BY PCR-SSP METHOD

    Institute of Scientific and Technical Information of China (English)

    邱长春; 赵岩; 陶贞寅; 朱席林; 徐作军; 董怡

    1995-01-01

    We report a simple and rapid HLA-DRB1 generic typing metbod,PCR-SSP,which is practical and inexpensive.We use 9 sequence-specific primers and 2 group specific primers to define the HLA-DRB1 specificities DR1,DR2,DR3,DR4,DR5,DR6,DR7,DR8,DR9 and DR10. The HLA DR3,DR5,DR6 and DR8 can be amplified by the two primers of DR3568 are positive.Any individuals can be typed with some exception: the three pairs of phenotype DR3/DR3 and DR3/DR6,DR5/DR5 and DR5/DR6, DR8/DR8 and DR8/DR6 cannot be discriminated from each other.We typed 106 unrelated healthy people from Beijing locations in two weeks.We think this typing method is suitable to replace the error-Prone serologic HLA-DR tests in routine clinical practice,including the prospective typing of cadaveric organ donors.

  19. The essential oil of the protected species: Thymus praecox ssp. penyalarensis

    Directory of Open Access Journals (Sweden)

    José Blanco Salas

    2012-03-01

    Full Text Available The essential oil of a protected Spanish species, Thymus praecox ssp. penyalarensis, was firstly analyzed [Gas Chromatography-Mass Spectrometry (GC-MS] from wild populations during the phenological stages of flowering and fruiting. In flowering, the yield was 1.2%, and the major components were identified as thymol (18.5%, p-cymene (14.6%, carvacrol (11.6%, and γ-terpinene (10.1%. In fruiting, the yield was 0.9% and the major components resulted to be p-cymene (19.0%, carvacrol (16.5%, and borneol (10.5%. An experimental cultivation of the taxa was made also in order to analyze its essential oil as well. The yield was 1.3%, and the main compounds were thymol (19.1%, p-cymene (17.0%, and γ-terpinene (12.3%. Finally, the composition of the essential oil of this plant is discussed in relation to chemotaxonomic and biogeographical aspects.

  20. The Discovery of Resistant Sources of Spring Barley, Hordeum vulgare ssp. spontaneum, and Unique Greenbug Biotypes.

    Science.gov (United States)

    Armstrong, J Scott; Mornhinweg, Dolores W; Payton, Mark E; Puterka, Gary J

    2016-02-01

    The genetic sources for host-plant resistance to the greenbug (Schizaphis graminum Rondani) in barley (Hordeum vulgare ssp. spontaneum) are limited in that only two single dominant genes Rsg1 and Rsg2 are available for the complex of greenbug biotypes. We evaluated four new barley lines from the Wild Barley Diversity Collection (WBDC) that previously showed potential for greenbug resistance. Three of those entries, WBDC 53, WBDC 117, WBDC 336, exhibited very dominant sources of resistance to older known biotypes B, C, E, F, H, I, and TX1, which also add to the host-plant differentials used to separate these greenbug biotypes. We also re-evaluated the earlier known set of greenbug biotypes that have been in culture for several years against the known host-plant differentials, and included seven newer greenbug isolates collected from Wyoming to the full complement of small grain differentials. This resulted in the discovery of five new greenbug biotypes, WY10 MC, WY81, WY10 B, WY12 MC, and WY86. Wyoming isolates WY4 A and WY4 B were identical in their phenotypic profile, and should be combined as a single unique greenbug biotype. These barley trials resulted in finding new sources of host-plant resistance, although more research needs to be conducted on what type of resistance was found, and how it can be used. We also document that the Wheatland, Wyoming area serves as a very conducive environment for the development of new greenbug biotypes. PMID:26527793

  1. Diversity of AMF associated with Ammophila arenaria ssp. arundinacea in Portuguese sand dunes.

    Science.gov (United States)

    Rodríguez-Echeverría, Susana; Freitas, Helena

    2006-11-01

    Dune vegetation is essential for the formation and preservation of sand dunes and the protection of the coast line. Coastal sand dunes are harsh environments where arbuscular mycorrhizal fungi (AMF) play an important role in promoting plant establishment and growth. We present a study of the diversity of AMF associated with A. arenaria ssp. arundinacea in two locations of the Portuguese coast under a Mediterranean climate. These two locations were selected to compare a well-preserved dune system from a protected area with a degraded dune system from a public beach. AMF diversity was assessed mainly by cloning and sequencing of a fragment of the ribosomal SSU using the primer NS31 and AM1. Most of the 89 AMF clones obtained from the rhizosphere and roots of A. arenaria belonged to the genus Glomus, the largest clade within the Glomeromycota. Higher AMF diversity was found in the least disturbed site, in which spores of Scutellospora persica, Glomus constrictum and Glomus globiferum were found in the rhizosphere of A. arenaria. PMID:17043895

  2. Anatomical and micromorphological particularities of vegetative organs in endemic Erysimum wittmanii Zaw. ssp. wittmanii

    Directory of Open Access Journals (Sweden)

    Irina Neta GOSTIN

    2009-11-01

    Full Text Available The Erysimum wittmanii ssp. wittmanii is an endemic biennial herbaceous species in South and East Carpathians. In this study the anatomical and micromorphological properties of this specie are investigated. Anatomical properties of root, stem and leaves were underlined. Roots acquire early in ontogenesis the secondary structure. Stems presents collateral vascular bundles both in primary and in secondary structure; cortical small bundles by concentric type, was observed on the cross sections from the top of the stem. The leaves are bifacial and amphystomatic. Scanning electron microscopy investigation regarding upper and lower epidermises of leaves in different developmental stages was carried out. Trichomes occur on both faces of young leaves. The tector hairs are multicelullar, usually three-armed; rarely four-armed or two-armed (especially on the epidermis from the veins. The hairs cell walls are thin and the surface is smooth in the first developmental stages (on very young leaves; on the young and mature leaves the trichomes have thick-walled cells, densely covered by micro-papillae.

  3. Characterization of a sagebrush (Artemisia tridentata ssp. wyomingensis) die-off on the Handford Site

    International Nuclear Information System (INIS)

    The Hanford Site contains one of the few remaining contiguous areas of shrub-steppe habitat left in Washington State. This habitat is home to many native plant and wildlife species, some of which are threatened with extinction or are unique to the Site. The importance of the Hanford Site increases as other lands surrounding the Site are developed, and these native species and habitats are lost. Stands of Wyoming big sagebrush (Artemisia tridentata ssp. wyomingensis) on the Site are a particularly important component of shrub-steppe habitat, because a number of wildlife require big sagebrush for food and cover. Since 1993, researchers and field biologists have made anecdotal observations of dying and declining sagebrush in stands of shrubs near the 100 Areas. This study was initiated to delineate and document the general boundary where sagebrush stands appear to be declining. We mapped the areal extent of the die-off using a global positioning system and found that the central portion of the die-off encompasses 280 hectares. Shrub stand defoliation was estimated to be near or greater than 80% in this area. The remainder of the die-off area exhibits varying mixtures of completely defoliated, partially defoliated, and healthy-looking stands. Declining sagebrush stands comprise a total of 1776 hectares

  4. Variation in Nectar Volume and Sugar Concentration of Allium ursinum L. ssp. ucrainicum in Three Habitats

    Directory of Open Access Journals (Sweden)

    Ágnes Farkas

    2012-01-01

    Full Text Available Floral nectar volume and concentration of ramson (Allium ursinum L. ssp. ucrainicum were investigated in three different habitats, including two types of sessile oak-hornbeam association on brown forest soil with clay illuviation and a silver lime-flowering ash rock forest association on rendzina. Daily nectar production ranged from 0.1 to 3.8 μL per flower with sugar concentrations of 25 to 50%. Mean nectar volumes and concentrations showed significant differences between freely exposed flowers and covered flowers, which had been isolated from flower visitors 24 h prior to nectar studies. Both the amount and quality of nectar were affected by microclimatic conditions and soil properties and varied between populations at different habitats. In the silver lime-flowering ash rock-forest association mean nectar volumes and concentrations were lower than in a typical sessile oak-hornbeam association on three occasions, the difference being significant in two cases. During full bloom, the date of sampling did not have a profound effect on either nectar volume or concentration.

  5. Complete genome sequence of Treponema pallidum ssp. pallidum strain SS14 determined with oligonucleotide arrays

    Science.gov (United States)

    Matějková, Petra; Strouhal, Michal; Šmajs, David; Norris, Steven J; Palzkill, Timothy; Petrosino, Joseph F; Sodergren, Erica; Norton, Jason E; Singh, Jaz; Richmond, Todd A; Molla, Michael N; Albert, Thomas J; Weinstock, George M

    2008-01-01

    Background Syphilis spirochete Treponema pallidum ssp. pallidum remains the enigmatic pathogen, since no virulence factors have been identified and the pathogenesis of the disease is poorly understood. Increasing rates of new syphilis cases per year have been observed recently. Results The genome of the SS14 strain was sequenced to high accuracy by an oligonucleotide array strategy requiring hybridization to only three arrays (Comparative Genome Sequencing, CGS). Gaps in the resulting sequence were filled with targeted dideoxy-terminators (DDT) sequencing and the sequence was confirmed by whole genome fingerprinting (WGF). When compared to the Nichols strain, 327 single nucleotide substitutions (224 transitions, 103 transversions), 14 deletions, and 18 insertions were found. On the proteome level, the highest frequency of amino acid-altering substitution polymorphisms was in novel genes, while the lowest was in housekeeping genes, as expected by their evolutionary conservation. Evidence was also found for hypervariable regions and multiple regions showing intrastrain heterogeneity in the T. pallidum chromosome. Conclusion The observed genetic changes do not have influence on the ability of Treponema pallidum to cause syphilitic infection, since both SS14 and Nichols are virulent in rabbit. However, this is the first assessment of the degree of variation between the two syphilis pathogens and paves the way for phylogenetic studies of this fascinating organism. PMID:18482458

  6. Internalization-dependent recognition of Mycobacterium avium ssp. paratuberculosis by intestinal epithelial cells.

    Science.gov (United States)

    Pott, Johanna; Basler, Tina; Duerr, Claudia U; Rohde, Manfred; Goethe, Ralph; Hornef, Mathias W

    2009-12-01

    Mycobacterium avium ssp. paratuberculosis (MAP) is the causative agent of Johne's disease, a highly prevalent chronic intestinal infection in domestic and wildlife ruminants. The microbial pathogenesis of MAP infection has attracted additional attention due to an association with the human enteric inflammatory Crohn's disease. MAP is acquired by the faecal-oral route prompting us to study the interaction with differentiated intestinal epithelial cells. MAP was rapidly internalized and accumulated in a late endosomal compartment. In contrast to other opportunistic mycobacteria or M. bovis, MAP induced significant epithelial activation as indicated by a NF-kappaB-independent but Erk-dependent chemokine secretion. Surprisingly, MAP-induced chemokine production was completely internalization-dependent as inhibition of Rac-dependent bacterial uptake abolished epithelial activation. In accordance, innate immune recognition of MAP by differentiated intestinal epithelial cells occurred through the intracellularly localized pattern recognition receptors toll-like receptor 9 and NOD1 with signal transduction via the adaptor molecules MyD88 and RIP2. The internalization-dependent innate immune activation of intestinal epithelial cells is in contrast to the stimulation of professional phagocytes by extracellular bacterial constituents and might significantly contribute to the histopathological changes observed during enteric MAP infection. PMID:19681906

  7. Growth Behavior of Phytopathogen Clavibacter michiganensis ssp. sepedonicus Treated with Selenium Biocomposites of Mushroom Origin

    Directory of Open Access Journals (Sweden)

    A.I. Perfileva

    2016-02-01

    Full Text Available The results of studying the effect of biologically obtained selenium nanocomposites on the bacterium Clavibacter michiganensis ssp. sepedonicus (Cms are presented. Cms is a Gram-positive bacterium, which causes one of the most dangerous potato diseases, ring rot. The effective alongside ecologically safe methods for combating Cms are lacking. As the agents feasible for use in this purpose, we examined the selenium nanocomposites obtained from the macrobasidiomycetes' submerged cultures. For exploring the bionanocomposites effect on Cms, the methods of agar well diffusion, the suspension turbidity measurement, and the colony-forming units count were applied. The results showed that all the nanocomposites under study lowered the bacterial suspension's absorption values compared to the reference specimen, that testified to the observation of bacteriostatic effect of the agents tested. The suppression action of nanocompostes was elucidated by means of both agar well diffusion assay and colony-forming units count. Thus, the results obtained demonstrate the occurrence of bacteriostatic and bactericidal effects of the substances under study, and favor the supposition on advisability of further research into the selenium nanocomposites as the agents for agricultural recovery from the bacterial pathogens.

  8. Full Scale Test of SSP 34m blade, edgewise loading LTT. Data Report 1

    Energy Technology Data Exchange (ETDEWEB)

    Nielsen, Magda; Jensen, Find M.; Nielsen, Per H. (and others)

    2010-01-15

    This report is a part of a research project where a 34m wind turbine blade from SSP-Technology A/S has been tested in edgewise direction (LTT). The applied load is 60% of an unrealistic extreme event, corresponding to 75% of a certificated extreme load. This report describes the background, the test set up, the tests and the results. For this project, a new solution has been used for the load application and the solution for the load application is described in this report as well. The blade has been submitted to thorough examination. More areas have been examined with DIC, both global and local deflections have been measured, and also 378 strain gauge measurements have been performed. Furthermore Acoustic Emission has been used in order to detect damage while testing new load areas. The global deflection is compared with results from a previous test and results from FEM analyses in order to validate the solution as to how the gravity load on the blade was handled. Furthermore, the DIC measurement and the displacement sensors measurements are compared in order to validate the results from the DIC measurements. The report includes the results from the test and a description of the measurement equipment and the data acquisition. (author)

  9. Comparative Transcriptome Analysis Reveals Heat-Responsive Genes in Chinese Cabbage (Brassica rapa ssp. chinensis).

    Science.gov (United States)

    Wang, Aihua; Hu, Jihong; Huang, Xingxue; Li, Xia; Zhou, Guolin; Yan, Zhixiang

    2016-01-01

    Chinese cabbage (Brassica rapa ssp. chinensis) is an economically and agriculturally significant vegetable crop and is extensively cultivated throughout the world. Heat stress disturbs cellular homeostasis and causes visible growth inhibition of shoots and roots, severe retardation in growth and development, and even death. However, there are few studies on the transcriptome profiling of heat stress in non-heading Chinese cabbage. In this study, we investigated the transcript profiles of non-heading Chinese cabbage from heat-sensitive and heat-tolerant varieties "GHA" and "XK," respectively, in response to high temperature using RNA sequencing (RNA seq). Approximately 625 genes were differentially expressed between the two varieties. The responsive genes can be divided into three phases along with the time of heat treatment: response to stimulus, programmed cell death and ribosome biogenesis. Differentially expressed genes (DEGs) were identified in the two varieties, including transcription factors (TFs), kinases/phosphatases, genes related to photosynthesis and effectors of homeostasis. Many TFs were involved in the heat stress response of Chinese cabbage, including NAC069 TF which was up-regulated at all the heat treatment stages. And their expression levels were also validated by quantitative real-time-PCR (qRT-PCR). These candidate genes will provide genetic resources for further improving the heat-tolerant characteristics in non-heading Chinese cabbage. PMID:27443222

  10. Chemical composition and nutritional evaluation of the seeds of Acacia tortilis (Forssk.) Hayne ssp. raddiana.

    Science.gov (United States)

    Embaby, Hassan E; Rayan, Ahmed M

    2016-06-01

    Chemical composition and nutritional evaluation as well as physicochemical and functional properties of seed flour of Acacia tortilis (Forssk.) Hayne ssp. raddiana were studied. The results indicated that seeds contained 5.30% moisture, 3.99% ash, 9.19% fat, 14.31% fiber, 27.21% protein and 45.30% carbohydrates. Potassium was the predominant element followed by calcium and then phosphorous. Phytic acid, tannins and trypsin inhibitor as antinutrients were detected. The amino acid profile compared well with FAO/WHO recommended pattern except for cystine/methionine, isoleucine, tyrosine/phenylalanine, lysine and threonine. Also, the first limiting amino acid was lysine. Fatty acid composition showed that linoleic acid was the major fatty acid, followed by palmitic, stearic, oleic and arachidic acids. The seed oil showed absorbance in the ultraviolet ranges, thus it can be used as a broad spectrum UV protectant. For physicochemical and functional properties, acacia seeds flour had excellent water holding index, swelling index, foaming capacity and foam stability. PMID:26830561

  11. Effects of amendments on the uptake and distribution of DDT in Cucurbita pepo ssp pepo plants

    International Nuclear Information System (INIS)

    The effects of soil amendments on the phytoextraction of ΣDDT (DDT + DDD + DDE) from soil ([ΣDDT] ∼ 1500 ng/g) by a pumpkin variety of Cucurbita pepo ssp pepo were tested and the patterns of ΣDDT storage throughout the plant shoot were examined. The soil amendments did not increase the total amount of ΣDDT extracted into plant shoots, but new information about ΣDDT distribution in the plants was obtained. As observed previously, the ΣDDT concentration in plant leaves (mean 290 ng/g) was significantly lower than in plant stems (mean 2600 ng/g). Further analysis revealed that ΣDDT composition was consistent throughout the plant shoot and that ΣDDT concentration in leaves and stems decreased exponentially as distance from the root increased, which was previously unknown. This new information about the patterns of ΣDDT uptake and translocation within pumpkin plants highlights the need for appropriate plant sampling strategies in future POPs phytoextraction research. - Patterns of ΣDDT storage in a pumpkin plant are elucidated and specific surfactant and mycorrhizal soil amendments did not increase the total amount of ΣDDT phytoextracted into plant shoots.

  12. Las pinturas alpestres de la Penya de l'Ermita del Vicari (Altea, Alicante

    Directory of Open Access Journals (Sweden)

    María Francia GALIANA BOTELLA

    2009-12-01

    Full Text Available RESUMEN: La zona central mediterránea de la Península Ibérica cuenta con un nuevo descubrimiento de Arte Rupestre Postpaleolítico en su versión esquemática. Las manifestaciones pintadas se revelan de gran interés al existir representaciones antropomorfas bitriangulares y oculadas, desconocidas en las variantes tipológicas al uso, asociadas a soliformes, zigzags, puntiformes y grupos de barras paralelas. La complejidad compositiva y figurativa, con un fuerte componente simbólico, indican la existencia de creencias difícilmente comprensibles desde nuestros conocimientos actuales. En los últimos años, este arte se fecha a partir del V milenio a.C. hasta el II milenio a.C, según los paralelos muebles del contexto arqueológico.ABSTRACT: A new discovery in Post Paleolithic Schematic Rock Art has been made in the central Mediterranean zone of the Iberian Peninsula. The Paintings are very interesting due to the presence of bitriangular anthropomorphic representations and idols, unknown before in typologies, usually associated to sunforms, zigzags, dots and groups of paralells bars. The complexity in figuration and composition and the strong symbolic component show the existence of beliefs not easily understandable with our present knowledge. In the present state of research this art is dated from the V millennium BC to the II millennium BC on the basis of comparisons with mobiliary art from an archeological context.

  13. Taraxacum nigricans, T. alpestre and allies in the Taraxacum sect. Alpestria: taxonomy, geography and conservation status

    Czech Academy of Sciences Publication Activity Database

    Štěpánek, Jan; Kirschner, Jan; Jarolímová, Vlasta; Kirschnerová, Ludmila

    2011-01-01

    Roč. 83, č. 4 (2011), s. 537-564. ISSN 0032-7786 R&D Projects: GA ČR GA206/07/1555; GA MŠk LC06073 Institutional research plan: CEZ:AV0Z60050516 Keywords : agamosperly * geografical parthenogenesis * typification Subject RIV: EF - Botanics Impact factor: 2.521, year: 2011

  14. Khorasan wheat population researching (Triticum turgidum, ssp. Turanicum (McKey in the minimum tillage conditions

    Directory of Open Access Journals (Sweden)

    Ikanović Jela

    2014-01-01

    Full Text Available Khorasan wheat occupies a special place in the group of new-old cereals (Triticum turgidum, ssp. Turanicum McKey. It is an ancient species, native to eastern Persia, that is very close to durum wheat by morphological characteristics. Investigations were carried out in agro ecological conditions of the eastern Srem, with two wheat populations with dark and bright awns as objects of study. The following morphological and productive characteristics were investigated: plant height (PH, spike length (SH, number of spikelets per spike (NSS, absolute weight (AW and grain weight per spike (GW, seed germination (G and grains yield (YG. Field micro-experiments were set on the carbonate chernozem soil type on loess plateau in 2011 and 2012. Hand wheat sowing was conducted in early March with drill row spacing of 12 cm. The experiment was established as complete randomized block system with four replications. Tending crops measures were not applied during the growing season. Plants were grown without usage of NPK mineral nutrients. Chemical crop protection measures were not applied, although powdery mildew (Erysiphe graminis was appeared before plants spike formation in a small extent. The results showed that both populations have a genetic yield potential. In general, both populations manifested a satisfactory tolerance on lodging and there was no seed dispersal. Plants from bright awns population were higher, had longer spikes and larger number of spikelet’s per spike. However, plants from dark awns population had higher absolute weight and grains weight per spike, as well as grain yield per plant. Strong correlation connections were identified among the investigated characteristics. The determination of correlations, as well as direct and indirect affects, enabled easier understanding of the mutual relationships and their balancing in order to improve the yield per unit area. [Projekat Ministarstva nauke Republike Srbije, br. TR 31078 i br. TR 31022

  15. Short communication: Evaluation of sampling socks for detection of Mycobacterium avium ssp. paratuberculosis on dairy farms.

    Science.gov (United States)

    Wolf, R; Orsel, K; De Buck, J; Kanevets, U; Barkema, H W

    2016-04-01

    Mycobacterium avium ssp. paratuberculosis (MAP) causes Johne's disease, a production-limiting disease in cattle. Detection of infected herds is often done using environmental samples (ES) of manure, which are collected in cattle pens and manure storage areas. Disadvantages of the method are that sample accuracy is affected by cattle housing and type of manure storage area. Furthermore, some sampling locations (e.g., manure lagoons) are frequently not readily accessible. However, sampling socks (SO), as used for Salmonella spp. testing in chicken flocks, might be an easy to use and accurate alternative to ES. The objective of the study was to assess accuracy of SO for detection of MAP in dairy herds. At each of 102 participating herds, 6 ES and 2 SO were collected. In total, 45 herds had only negative samples in both methods and 29 herds had ≥1 positive ES and ≥1 positive SO. Furthermore, 27 herds with ≥1 positive ES had no positive SO, and 1 herd with no positive ES had 1 positive SO. Bayesian simulation with informative priors on sensitivity of ES and MAP herd prevalence provided a posterior sensitivity for SO of 43.5% (95% probability interval=33-58), and 78.5% (95% probability interval=62-93) for ES. Although SO were easy to use, accuracy was lower than for ES. Therefore, with improvements in the sampling protocol (e.g., more SO per farm and more frequent herd visits), as well as improvements in the laboratory protocol, perhaps SO would be a useful alternative for ES. PMID:26851860

  16. [Effects of ruta SSP on the activity of the smooth gastrointestinal muscle isolated of rat].

    Science.gov (United States)

    Grigorjev, Carlota A; Brizuela, Nilda Y

    2010-01-01

    Ruta graveolens L. and Ruta chalepensis L. are plants used in folkloric medicine as antispasmodics, digestive and for intestinal gases. Animals used as experimental model were rats of the Wistar line, adult females, clinically healthy and with a weight average of 250 grams. We used strips of stomach and duodenum. Each one of the segments mounted on two stirrups in a bath of organ isolated with Ringer-lactate solution, at 37° C , pH: 7.3-7.4, and bubbled with 95% O2, 5% CO2. One of the stirrups was connected vertically to the bottom of the bath and the other to a transducer of tension connected to a Beckman polygraph. We applied 500 mgs of basal tension. After the stabilization, the ethanolic extract of Ruta ssp was added in increasing doses. At 50μl/ml the tone lower 23% in small intestine and lower 27% in stomach. However at 100 μl/ml the tone lower 32% and 35% respectively. In the other parameters the amplitude decrease 50% in the stomach at dose of 5 μl/ml while in the small intestine the amplitude lower 60%. With 10 μl/ml the amplitude change in both organs ( 96% in small intestine, and 75% in stomach). The frequency changes in both organs ( 32% in small intestine, and 50% in stomach) at 10 μl/ml Rue showed decreased effects on isolated small intestine and stomach were is dose dependent, maybe we were demonstrated the effects digestive of Ruta. PMID:21450144

  17. Flowering time in wild beet ( Beta vulgaris ssp. maritima) along a latitudinal cline

    Science.gov (United States)

    Dijk, Henk Van; Boudry, Pierre; McCombre, Helen; Vernet, Philippe

    The wild beet ( Beta vulgaris ssp. maritima, a perennial species from the Mediterranean and the European Atlantic coasts) shows marked variation in flowering time in terms of both the year of first flowering and flowering date in a given year. Much of this variability is related to latitude. Beta vulgaris plants flower either in the same year as they germinate or in their second year. This is mainly due to differences in their requirement for vernalization, which is determined by a single gene B/b and by quantitative trait loci. The more southern the origin of the plants, the less vernalization is required. Also the B allele, which cancels vernalization requirement completely, has a high frequency in the Mediterranean region, but is completely absent in the northern part of the distribution of this species. We found that flowering date variation in relation to the latitude of origin is maintained under greenhouse conditions but does not follow a simple clinal relationship. From the Mediterranean northwards to the west coast of Brittany, flowering occurs progressively earlier, but from Brittany northwards to south-east England and The Netherlands it is progressively later. A possible explanation for this difference is that in the southern part of the range sensitivity to daylength and warmth control flowering time, whereas further north vernalization requirement is also a key factor. A substantial part of all differences in flowering time was heritable: heritability within populations was measured as 0.33 under greenhouse conditions. The high heritability implies evolutionary change may occur in this character.

  18. Avaliação da atividade antimicrobiana e citotóxica de extratos de Gochnatia polymorpha ssp floccosa Evaluation of antimicrobial and cytotoxic activitiy of extracts from Gochnatia polymorpha (Less) ssp floccosa

    OpenAIRE

    Maria Élida A. Stefanello; Marcos J. Salvador; Izabel Y. Ito; Patrícia A.T. Macari

    2006-01-01

    Neste estudo procedeu-se a avaliação da atividade antimicrobiana e citotóxica de extratos de Gochnatia polymorpha ssp floccosa, espécie empregada na medicina popular contra doenças respiratórias. Folhas, cascas do tronco e ramos foram extraídos com hexano, diclorometano e etanol, sucessivamente, sendo obtidos os respectivos extratos brutos. A atividade antimicrobiana foi determinada pelo método de difusão em ágar utilizando-se bactérias Gram-positivas, Gram-negativas e fungos. A avaliação da ...

  19. Salmonella enterica ssp. arizonae infection in a 43-year-old Italian man with hypoglobulinemia: a case report and review of the literature

    Directory of Open Access Journals (Sweden)

    Noto Pasquale

    2011-07-01

    Full Text Available Abstract Introduction Salmonella enterica ssp. arizonae is an uncommon human pathogen with serious infections reported in immunocompromised hosts. In Europe, only a few cases have been described. Patients with this infection usually have a history of contact with reptiles or travel abroad. We present a case report of infection in a patient with hypoglobulinemia and a literature review. Case presentation We describe the case of a 43-year-old Caucasian Italian man with hypoglobulinemia who presented to our hospital with sepsis and diarrhea. A stool culture yielded S. enterica ssp. arizonae. Our patient was treated with oral ciprofloxacin and made a full recovery. We also present a review of the cases of S. enterica ssp. arizonae infections previously reported in Europe. Conclusions The majority of infections from S. enterica ssp. arizonae occur in patients who are immunocompromised. Data from the literature suggests that it may be difficult to eradicate the bacteria and thus, prolonged antibiotic courses are often used. It would be advisable for clinicians to investigate for pre-existing immune dysfunction if S. enterica ssp. arizonae is isolated. In Italy, although there have only been a few cases, the likely route of transmission remains unclear and requires further surveillance.

  20. A modified method of 3D-SSP analysis for amyloid PET imaging using [11C]BF-227

    International Nuclear Information System (INIS)

    Three-dimensional stereotactic surface projection (3D-SSP) analyses have been widely used in dementia imaging studies. However, 3D-SSP sometimes shows paradoxical results on amyloid positron emission tomography (PET) analyses. This is thought to be caused by errors in anatomical standardization (AS) based on an 18F-fluorodeoxyglucose (FDG) template. We developed a new method of 3D-SSP analysis for amyloid PET imaging, and used it to analyze 11C-labeled 2-(2-[2-dimethylaminothiazol-5-yl]ethenyl)-6-(2-[fluoro]ethoxy) benzoxazole (BF-227) PET images of subjects with mild cognitive impairment (MCI) and Alzheimer's disease (AD). The subjects were 20 with MCI, 19 patients with AD, and 17 healthy controls. Twelve subjects with MCI were followed up for 3 years or more, and conversion to AD was seen in 6 cases. All subjects underwent PET with both FDG and BF-227. For AS and 3D-SSP analyses of PET data, Neurostat (University of Washington, WA, USA) was used. Method 1 involves AS for BF-227 images using an FDG template. In this study, we developed a new method (Method 2) for AS: First, an FDG image was subjected to AS using an FDG template. Then, the BF-227 image of the same patient was registered to the FDG image, and AS was performed using the transformation parameters calculated for AS of the corresponding FDG images. Regional values were normalized by the average value obtained at the cerebellum and values were calculated for the frontal, parietal, temporal, and occipital lobes. For statistical comparison of the 3 groups, we applied one-way analysis of variance followed by the Bonferroni post hoc test. For statistical comparison between converters and non-converters, the t test was applied. Statistical significance was defined as p < 0.05. Among the 56 cases we studied, Method 1 demonstrated slight distortions after AS of the image in 16 cases and heavy distortions in 4 cases in which the distortions were not observed with Method 2. Both methods demonstrated that the

  1. Evaluation of the wood CCA preservative treatment process of Eucalyptus (Eucaliptus ssp) by X-ray fluorescence technique

    International Nuclear Information System (INIS)

    Brazil produces around 1,2 mi m3 of treated wood to meet the annual demand of railway, electric, rural and construction sectors. The treated woods used for poles, sleepers, fence posts and plywoods should be according to Brazilian norms requirements. The most used wood species are eucalyptus (Eucaliptus ssp)and pine (Pinus ssp). The most wood preservative products used in Brazil are CCA (Chromated Copper Arsenate) and CCB (Copper Chromium and Boron Salt). The analytical methods, such as Flame Atomic Absorption Spectrometry (FAAS) and Plasma Inductively Coupled Optical Emission Spectrometry (ICPOES) have been used for the evaluation of those treatment processes. In this work, the sapwood sample was obtained from eucalyptus trees (Eucaliptus ssp) obtained from Minas Gerais State, Brazil, cut plantation areas. Sawdust sapwood sample was grounded and submitted to different additions of CCA solutions (0.2, 0.7, 1.3, 2.3, 3.6, 6.3, 11.7and17.9 kg m-3). Power and pressed pellets sapwood samples, analyzed by EDXRFS, showed a good linear relation (r2>0.99) between the characteristic intensity fluorescent lines (CuΚα, CrΚαand AsΚΒ) and their concentration, also, showed adequate sensitivity (LQ -1) for Cu, Cr and As determination in treated woods. Cu, Cr and As were determined in powdered sawdust samples by FAA spectrometry, using the AWPA A11-93 standard method; the relation between the CCA retention and their concentration showed a lower linear relation than EDXRFS; the FAAS spreading result could be attributed to laboratorial CCA addition process. (author)

  2. Bacillus amyloliquefaciens ssp. plantarum strains as potential protective starter cultures for the production of Bikalga, an alkaline fermented food

    DEFF Research Database (Denmark)

    Compaor, C.S.; Nielsen, D.S.; Sawadogo-Lingani, H.;

    2013-01-01

    Aims: To identify and screen dominant Bacillus spp. strains isolated from Bikalga, fermented seeds of Hibiscus sabdariffa for their antimicrobial activities in brain heart infusion (BHI) medium and in a H. sabdariffa seed-based medium. Further, to characterize the antimicrobial substances produced...... produced several lipopeptide antibiotics and showed good potential for biological control of Bikalga. Significance and Impact of the Study: Pathogenic bacteria often occur in spontaneous food fermentations. This is the first report to identify indigenous B. amyloliquefaciens ssp. plantarum strains as...

  3. The enhancement of anther culture efficiency in Brassica napus ssp. oleifera Metzg. (Sinsk.) using low doses of gamma irradiation

    International Nuclear Information System (INIS)

    Selected buds of Brassica napus ssp. oleifera Metzg. (Sinsk) cvs Ariana and Primor were treated with various doses of γ-irradiation. When the anthers were removed and cultured, it was shown that low doses of γ-irradiation greatly enhanced anther culture efficiency in both cultivars. When microspore culture techniques were used, however, embryogenesis was reduced by irradiation in all treatments. Some of the resulting embryoids developed directly into plantlets, whereas others developed abnormally and produced secondary embryoids. Plants were regenerated from both anther embryoids and secondary embryoids and, following diploidization, seed was obtained from these plants. (author)

  4. Analysis of expressed sequence tags from Musa acuminata ssp. burmannicoides, var. Calcutta 4 (AA) leaves submitted to temperature stresses

    OpenAIRE

    Santos, C R; Martins, N.F.; Horberg, H.M.; Almeida, E.R.P.; Coelho, M.C.F.; Togawa, R.; F. R. Silva; Caetano, A.R.; Miller, R.N.G.; de Souza, M T

    2005-01-01

    In order to discover genes expressed in leaves of Musa acuminata ssp. burmannicoides var. Calcutta 4 (AA), from plants submitted to temperature stress, we produced and characterized two full-length enriched cDNA libraries. Total RNA from plants subjected to temperatures ranging from 5°C to 25°C and from 25°C to 45°C was used to produce a COLD and a HOT cDNA library, respectively. We sequenced 1,440 clones from each library. Following quality analysis and vector trimming, we assembled 2,286 se...

  5. Full Scale Test SSP 34m blade, edgewise loading LTT. Extreme load and PoC_InvE Data report

    DEFF Research Database (Denmark)

    Nielsen, Magda; Roczek-Sieradzan, Agnieszka; Jensen, Find Mølholt;

    edgewise direction (LTT). The blade has been submitted to thorough examination by means of strain gauges, displacement transducers and a 3D optical measuring system. This data report presents results obtained during full scale testing of the blade up to 80% Risø load, where 80% Risø load corresponds to 100......This report is the second report covering the research and demonstration project “Eksperimentel vingeforskning: Strukturelle mekanismer i nutidens og fremtidens store vinger under kombineret last”, supported by the EUDP program. A 34m wind turbine blade from SSP-Technology A/S has been tested in...

  6. Fertilization in Brassica campestris ssp.pekinensis and its duration of each stage

    Institute of Scientific and Technical Information of China (English)

    PENG Jie; SHEN Jiaheng

    2007-01-01

    This paper reports the process of fertilization in Brassica campestris ssp.pekinensis and the duration of each stage.The results are as follows:(1)Pollen germinates on stigma 2-3 h after pollination.(2)4-8 h after pollination,pollen tube grows in the style.(3)8-14 h after pollination,pollen tube grows in the ovary and gets into the ovule via the micropyle.(4)16 h after pollination,one sperm nucleus moves to the egg and enters it.(5)The sperm nucleus adheres to the nuclear membrane of the egg 18 h after pollination.(6)20 h after pollination,it enters the egg nucleus and male chromatin gradually disperses and 24 h after pollination,a male nucleolus appears.A large female nucleolus and a small male nucleolus occur in the nucleus of the fertilized egg,and zygote formed.The dispersing of sperm chromatin in the egg nucleus takes about 4 h.(7)32--34 h after pollination,the division of zygote begins.The dormancy stage of the zygote lasts for about 8-10 h.(8)The pair polar nuclei lie in the chalazal end of the egg betbre fertilization,which may fuse into a secondary nucleus or not.(9)16-18 h after pollination,the sperm nucleus moves to the polar nuclei or the secondary nucleus.18 h after pollination,the sperm nucleus adheres to the nuclear membrane of the polar nuclei or that of the secondary nucleus.(10)20 h after pollination,the sperm nucleus enters one of the polar nuclei or the secondary nucleus and a triple fusion takes place.The process of fusion is similar to the karyogamy but faster.The dispersing of the sperm chromatin in the polar nucleus or secondary nucleus takes about 2 h.(11)22 h after pollination,the primary endosperm nucleus formed.The female and male nucleoli cannot fuse with each other betbre mitotic division of the primary endosperm nucleus.(12)24 h after pollination,the division of the primary endosperm nucleus actually takes place.

  7. Subsurface irrigation of potato crop (Solanum tuberosum ssp. Andigena) in Suka Kollus with different drainage systems

    Science.gov (United States)

    Serrano-Coronel, Genaro; Chipana-Rivera, René; Fátima Moreno-Pérez, María; Roldán-Cañas, José

    2016-04-01

    Among the most important hydraulic structures of pre-Hispanic ancestral technology developed in the Andean region, we find the suka kollus, aymara word, called also waru waru, en quechua or raised fields, in English. They are raised platforms surrounded by water canals that irrigate subsurface, but also have the function of draining, to deal with floods because they are surrounding Lake Titicaca. They also have the property of generating a thermoregulatory effect to crops, depending on the configuration of the channels and platforms. Such agro-ecosystems are being abandoned, however, if properly addressed crop management and some drainage canals are replaced by underground drains for increased crop area could be very useful in enabling marginal soils affected by salts and / or excess water. For these reasons, the objective of this study was to evaluate the subsurface irrigation in the potato crop in suka kollus under a system of surface drainage, and mixed drainage (surface and subsurface). The study was conducted in marginal soils of Kallutaca area, located 30 km from the city of La Paz, Bolivia, at a height of 3892 m.a.s.l. The cultivation of the potato (Solanum tuberosum ssp. Andigena) was used. Four treatments were tested with different widths of the platforms: T1 (Control) with drainage through channels; T2 (replacing a channel by a drain); T3 (replacing two channels by two drains); T4 (replacing three channels by three drains). The flow of water into the soil from the water table was predominantly upward, except during periods of high rainfall. In terms of treatments, the flow in T1 was higher, mainly at weeks 8 to 11 after seedling emergence, coinciding with the phenological phases of flowering and at the beginning of the tuber ripening. It was followed by T3, T2 and T4 treatments, respectively. Tuber yield, if one considers that the channels detract arable land, was higher in the T3 treatment,16.4 Mg / ha, followed by T2 treatment, 15.2 Mg / ha, T1

  8. Anti-microbial and anti-oxidant activities of Illicium verum, Crataegus oxyacantha ssp. monogyna and Allium cepa red and white varieties

    OpenAIRE

    Benmalek, Yamina; Yahia, Ouahiba Ait; Belkebir, Aicha; Fardeau, Marie-Laure

    2013-01-01

    Illicium verum (badiane or star anise), Crataegus oxyacantha ssp monogyna (hawthorn) and Allium cepa (onion), have traditionnally been used as medicinal plants in Algeria. This study showed that the outer layer of onion is rich in flavonols with contents of 103 +/- 7.90 mu g/g DW (red variety) and 17.3 +/- 0.69 mu g/g DW (white variety). We also determined flavonols contents of 14.3 +/- 0.21 mu g/g 1.65 +/- 0.61 mu g/g for Crataegus oxyacantha ssp monogyna leaves and berries and 2.37 +/- 0.10...

  9. Production of antihypertensive peptides by enzymatic zein hydrolysate from maize-zea mays ssp. mexicana introgression line

    International Nuclear Information System (INIS)

    Teosintes are essential gene reservoir for maize breeding improvement, among which Zea mays ssp. mexicana has many valuable traits deserved to be transferred into maize genetic background. In this study, one maize-teosinte introgression line SD00100 was selected from the population of Zea mays ssp. mexicana as wild parent. This introgression line manifested the outstanding agricultural traits similar to maize parent Ye 515 and alien genetic material was identified by genomic in situ hybridization (GISH). To produce bioactive peptides with potent angiotensin converting enzyme (ACE) inhibitory activity, zein extracted from endosperm meal was then undergone enzymatic hydrolysis with thermolysin and the hydrolysate was then filtered through a 3 kDa cut-off membrane. ACE inhibitory activity of permeate from Ye 515 and SD00100 was evaluated by RP-HPLC. The IC50 values of the peptides obtained from maize parent and the introgression line were 96.9 micro g/ml and 22.9 micro g/ml, respectively, with significant difference between them. Our results showed that an outstanding inbred maize line was obtained for production of antihypertensive peptides as well as for further development of functional food. (author)

  10. HLA-DRβ1*04 typing by simple in-house PCR-SSP technique for rheumatoid arthritis patients.

    Science.gov (United States)

    Parasannanavar, Devaraj Jatteppa; Yeola, Avani; Pradhan, Vandana; Rajyadhaksha, Anjali; Ghosh, Kanjaksha

    2013-04-01

    A strong association between rheumatoid arthritis (RA) and human leukocyte antigen (HLA) has been observed in many different populations and that accounts for approximately one-third of the genetic component of RA susceptibility. The greatest effect comes from DRβ1 gene where the strongest association has been found with DRβ1*04 (DR4) allele. As serology has some disadvantages over polymerase chain reaction (PCR)-based techniques and commercially available PCR-based kits are expensive, this study was aimed to standardize simple in-house PCR-SSP technique. Accuracy of this test was further checked with standard PCR-SSOP (RLS) results. The frequency HLA-DRβ1*04 was significantly increased among RA patients when compared with normal controls. In this study, a very simple, convenient and more cost-effective in-house PCR-SSP technique was standardized for HLA-DRβ1*04 typing that is helpful to RA diagnosis in developing countries like India, which can be used as a good screening test. PMID:22623274

  11. Macrolide Resistance in the Syphilis Spirochete, Treponema pallidum ssp. pallidum: Can We Also Expect Macrolide-Resistant Yaws Strains?

    Science.gov (United States)

    Šmajs, David; Paštěková, Lenka; Grillová, Linda

    2015-10-01

    Treponema pallidum ssp. pallidum (TPA) causes over 10 million new cases of syphilis worldwide whereas T. pallidum ssp. pertenue (TPE), the causative agent of yaws, affects about 2.5 million people. Although penicillin remains the drug of choice in the treatment of syphilis, in penicillin-allergic patients, macrolides have been used in this indication since the 1950s. Failures of macrolides in syphilis treatment have been well documented in the literature and since 2000, there has been a dramatic increase in a number of clinical samples with macrolide-resistant TPA. Scarce data regarding the genetics of macrolide-resistant mutations in TPA suggest that although macrolide-resistance mutations have emerged independently several times, the increase in the proportion of TPA strains resistant to macrolides is mainly due to the spread of resistant strains, especially in developed countries. The emergence of macrolide resistance in TPA appears to require a two-step process including either A2058G or A2059G mutation in one copy of the 23S rRNA gene and a subsequent gene conversion unification of both rRNA genes. Given the enormous genetic similarity that was recently revealed between TPA and TPE strains, there is a low but reasonable risk of emergence and spread of macrolide-resistant yaws strains following azithromycin treatment. PMID:26217043

  12. USE OF METHYL JASMONATE TO ENHANCE THE PRODUCTION OF 6-METHOXYPODOPHYLLOTOXIN IN CELL CULTURES OF LINUM THRACICUM SSP. THRACICUM

    Directory of Open Access Journals (Sweden)

    Pavlina Sasheva

    2015-09-01

    Full Text Available Secondary metabolites, such as lignans have important ecological role for plants and at the same time are lead structures for drug design in human medicine. The aryltetralin type of lignans are strong cytotoxic agents and are found in members of the genus Linum (Linaceae.Objective: In vitro cultures of Linum thracicum ssp. thracicum were developed to identify a medium type and an elicitation technique that favor enhanced production of the aryltetralin lignan 6-methoxypodophyllotoxin.Method: Methyl jasmonate and salicylic acid were administered to four cell lines of Linum thracicum ssp. thracicum for 24 and 72 hours. The 6-methoxypodophyllotoxin was identified by HPLS-ESI-MS/MS in positive ion mode, and its production was determined via quantitative HPLC analysis.Results: A cell line, called Li-20, which was developed in reduced sucrose environment proved to be the fastest growing and the highest producing among the tested cell lines. Within 24 hours upon MJ elicitation, the eight-day-old Li-20 increased 2.3-fold in 6-methoxypodophyllotoxin content, reaching 4.3 mg on a dry weight basis. Negative or no effect was registered after salicylic acid application.Conclusion: MJ elicitation is an effective strategy to improve the 6-methoxypodophyllotoxin accumulation within short periods of time, and an optimization of the cultivation medium beforehand is a prerequisite in the pipeline.

  13. Application of a Simple In-House PCR-SSP Technique for HLA-B* 27 Typing in Spondyloarthritis Patients

    Directory of Open Access Journals (Sweden)

    Devraj J. Parasannanavar

    2013-01-01

    Full Text Available Background. Microlymphocytotoxicity (MLCT and flowcytometry (FC are the conventional serological methods to detect HLA-B* 27. Due to some disadvantages in these methods, most of the HLA laboratories have now switched over to molecular methods. Molecular techniques based on commercial kits are expensive; as such many laboratories with limited funds in developing countries cannot afford these techniques. Aims. Our main aim was to standardize a simple inexpensive in-house PCR-SSP technique for HLA-B* 27 typing. Materials and Methods. Sequence Specific primers were designed to amplify all the subtypes of B* 27 using IMGT-HLA sequence database. Accuracy was checked by retyping of 90 PCR-SSOP typed controls. Results. The presence of 149 bp specific band with control band on 2% agarose gel showed B* 27 positivity. No discrepancies were found when compared with PCR-SSOP results. The frequency of HLA-B* 27 was found to be significantly increased (68.75% versus 4.40%, O.R 46.909: P value 6.62E-32 among 700 SpA patients as compared to controls. Clinically, 54% of patients had polyarticular arthritis with SI joints involvement (68% and restricted spine flexion (60%. Conclusion. In-house PCR-SSP technique is very simple and inexpensive technique to detect B* 27 allele, which was strongly associated with SpA patients from Western India.

  14. A SNP and SSR based genetic map of asparagus bean (Vigna. unguiculata ssp. sesquipedialis and comparison with the broader species.

    Directory of Open Access Journals (Sweden)

    Pei Xu

    Full Text Available Asparagus bean (Vigna. unguiculata ssp. sesquipedialis is a distinctive subspecies of cowpea [Vigna. unguiculata (L. Walp.] that apparently originated in East Asia and is characterized by extremely long and thin pods and an aggressive climbing growth habit. The crop is widely cultivated throughout Asia for the production of immature pods known as 'long beans' or 'asparagus beans'. While the genome of cowpea ssp. unguiculata has been characterized recently by high-density genetic mapping and partial sequencing, little is known about the genome of asparagus bean. We report here the first genetic map of asparagus bean based on SNP and SSR markers. The current map consists of 375 loci mapped onto 11 linkage groups (LGs, with 191 loci detected by SNP markers and 184 loci by SSR markers. The overall map length is 745 cM, with an average marker distance of 1.98 cM. There are four high marker-density blocks distributed on three LGs and three regions of segregation distortion (SDRs identified on two other LGs, two of which co-locate in chromosomal regions syntenic to SDRs in soybean. Synteny between asparagus bean and the model legume Lotus. japonica was also established. This work provides the basis for mapping and functional analysis of genes/QTLs of particular interest in asparagus bean, as well as for comparative genomics study of cowpea at the subspecies level.

  15. Progeny of Eucalyptus globulus Labill ssp. Globulus%蓝桉子代测定

    Institute of Scientific and Technical Information of China (English)

    臧道群; 张川红; 罗军民; 黄永祥; 朱仁刚

    2003-01-01

    本文对云南省一平浪蓝桉实生种子园的子代测定林进行初期评价.该子代测定采用α-循环设计,21个重复,每个重复有18个不完全区组,每个区组分为15个小区,每小区2株树.全部270个家系均为自由授粉的半同胞家系,按来源分为3个类型(原产地天然林、云南地方品种和种子园),11个地区.调查和分析的数据包括造林后2年时的树高、胸径、冠幅、干形、抗寒性和存活率等性状.分析结果如下:1. 不同的类型在生长表现上存在显著差异,来自种子园的类型为最好.2. 自不同地区的蓝桉在各性状上都表现出显著差异.在生长表现上,来自维克多利亚东部、西部和各种子园的子代比其它地区的好.云南当地蓝桉子代的耐寒性和两年时的保存率为最好,在生长、干形和抗病方面与塔斯马尼亚东部和南部的蓝桉子代表现相似.采用两株小区,明显比单株小区降低小区缺失率,提高分析的可靠性.表3参7.%The preliminary assessment of progeny test in a seed orchard of Eucalyptus globulus Labill. ssp. globulus at Yipinglang State Farm of Yunnan Province in China was conducted. The trial was composed of 21 replications, with 2 trees on each plot, 15 plots in each incomplete block, and 18 incomplete blocks in each replication, laid out in a α- design of 270 open-pollinated families . The families were of three categories (natural populations, local land race and seed orchard). They were further subdivided into 11 regions. The data from an assessment of growth, stem form and other characteristics of the young trees after being planted 2 years were analyzed. Results are as follows: the different categories differed significantly in their growth, with the families from seed orchards being the best. Regions also differed significantly in their growth. The families from the regions of Western Victoria, Eastern Victoria and all three seed orchards were better than others. The

  16. CITOGENETICS EFFECTS INDUCED BY THE ADMINISTRATION OF SUBSTANCES WITH REDUCTION POTENTIAL AT LARIX DECIDUA MILL. SSP. CARPATICA, PICEA ABIES (L. KARST. AND THUJA ORIENTALIS L

    Directory of Open Access Journals (Sweden)

    Ioana Anca Ieremia

    2007-08-01

    Full Text Available The paper present the influence of ascorbic acid, riboflavin, citric acid and sodium bisulphit upon the mitotic division of Larix decidua Mill ssp. carpatica, Picea abies (L. Karst and Thuja orientalis L. The treatment was applied in one variant, germinated seeds in ascorbic acid, riboflavin, citric acid and sodium bisulphit in 3 concentrations.

  17. Note on Celastrus paniculatus Willd. ssp. aggregatus K.M. Matthew ex K.T. Matthew (Celastraceae)

    OpenAIRE

    Francis, J W; M.M. Dandu; M. M. Sardesai; A.S. Dhabe

    2012-01-01

    Celastrus L., a large genus of family Celastraceae, is represented by ca 31 species in the world. In India the genus is represented by seven species and one subspecies. This paper deals with addition of Celastrus paniculatus ssp. aggregatus to the flora of Andhra Pradesh, Kerala, Goa and Andaman Islands. A note on its distribution is also provided in this paper.

  18. Anti-microbial and anti-oxidant activities of Illicium verum, Crataegus oxyacantha ssp monogyna and Allium cepa red and white varieties.

    Science.gov (United States)

    Benmalek, Yamina; Yahia, Ouahiba Ait; Belkebir, Aicha; Fardeau, Marie-Laure

    2013-01-01

    Illicium verum (badiane or star anise), Crataegus oxyacantha ssp monogyna (hawthorn) and Allium cepa (onion), have traditionnally been used as medicinal plants in Algeria. This study showed that the outer layer of onion is rich in flavonols with contents of 103 ± 7.90 µg/g DW (red variety) and 17.3 ± 0.69 µg/gDW (white variety). We also determined flavonols contents of 14.3 ± 0.21 µg/g 1.65 ± 0.61 µg/g for Crataegus oxyacantha ssp monogyna leaves and berries and 2.37 ± 0.10 µg/g for Illicium verum. Quantitative analysis of anthocyanins showed highest content in Crataegus oxyacantha ssp monogyna berries (5.11 ± 0.266 mg/g), while, inner and outer layers of white onion had the lowest contents with 0.045 ± 0.003mg/g and 0.077 ± 0.001 mg/g respectively.   Flavonols extracts presented high antioxidant activity as compared with anthocyanins and standards antioxidants (ascorbic acid and quercetin). Allium cepa and Crataegus oxyacantha ssp monogyna exhibited the most effective antimicrobial activity. PMID:23579100

  19. Primula munroi 的产自东喜马拉雅的一个新亚种 --P. munroi ssp. schizocalyx%A new subspecies of Primula munroi Lindl. from the Eastern Himalaya--P. munroi ssp. schizocalyx

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    @@ In the course of revising the genus Primula Linn.(Primulaceae) in the Himalayas of Indian region, the authors came across a set of collections identified as P. involucrata Wall. gathered by the pioneer Himalayan travellers, merely written on determinavit slips as P. involucrata Wall. forma schizocalyx by I. B. Balfour without any date. Critical studies revealed that these specimens are quite distinct from the species proper so far described. The new taxon is described as a subspecies and illustrated. As P. involucrata Wall. ex Duby (1844) is a later homonym of P. involucrata Sweet (1839) and illegitimate, and its correct name is P. munroi Lindl. (1847), we name our new subspecies as P. munroi ssp. schizocalyx Balf. f. ex Basak et Maiti. 

  20. Pólen 2n e mecanismos meióticos de formação em Solanum commersonii ssp 2n pollen and meiotic mechanisms of Formation in Solanum commersonii ssp

    Directory of Open Access Journals (Sweden)

    Lívia Gracielle Oliveira Tomé

    2009-04-01

    Full Text Available Solanum commersonii subsp. commersonii Dun. e Solanum commersonii subsp. malmeanum Bitt. (2n=2x=24 - 1EBN não podem ser diretamente cruzadas com a batata cultivada de S. tuberosum subsp. tuberosum L. (2n=4x=48 -4 EBN em razão da barreira da ploidia e do número de equilíbrio do endosperma (EBN. No entanto, a produção de pólen não reduzido por S. commersonii ssp. (2x=2n=24 - 1EBN, permite o cruzamento desta com dihaplóides de batata e com as espécies diplóides S. phureja Juz. & Bukasov. e S. chacoense Bitt., que possuem 2 EBN. Conduziu-se este trabalho, com o objetivo de determinar o mecanismo meiótico e a freqüência dos grãos de pólen não reduzidos em cinco clones de Solanum commersonii ssp. Foram avaliados três clones de S. commersonii subsp. commersonii (SCC e dois de S. commersonii subsp. malmeanum (SCM. Nas avaliações, duzentos grãos de pólen viáveis foram corados (carmim acético 2% e mensurados, sendo considerados não reduzidos aqueles com o diâmetro igual ou superior a 25 µm. O clone Solanum commersonii subsp. commersonii Dun. (SCC 100 produz 26.1% de polen não reduzido, por fusos fundidos e fusos paralelos, o qual pode ser utilizado em programas de melhoramento.Solanum commersonii subsp. commersonii Dun. and Solanum commersonii subsp. malmeanum Bitt. (2n=2x=24 -1EBN cannot be directly crossed with the cultivated Solanum tuberosum subsp. Tuberosum L. (2n=4x=48 - 4EBN species due to ploidy barriers and endosperm balance number (EBN. However, non-reduced pollen production by the wild species S. commersonii ssp. (2x=2n=24 -1EBN, allows the crossing of these species with dihaploids of potato and with the diploids species, S. phureja Juz. & Bukasov. and S. chacoense Bitt., all with 2EBN. The aim of this work was to determine the meiotic mechanism and frequency of non-reduced pollen production of five clones of S. commersonii ssp. Three different clones of S. commersonii subsp. commersonii Dun. (SCC and two of S

  1. Enhanced natural killer cell activation by exopolysaccharides derived from yogurt fermented with Lactobacillus delbrueckii ssp. bulgaricus OLL1073R-1.

    Science.gov (United States)

    Makino, Seiya; Sato, Asako; Goto, Ayako; Nakamura, Marie; Ogawa, Miho; Chiba, Yoshika; Hemmi, Jun; Kano, Hiroshi; Takeda, Kazuyoshi; Okumura, Ko; Asami, Yukio

    2016-02-01

    Yogurt is generally recognized as a beneficial food for our health, but research into its physiological effects has focused mainly on intestinal dysfunctions such as constipation and diarrhea. We previously found yogurt fermented with Lactobacillus delbrueckii ssp. bulgaricus OLL1073R-1 (hereafter OLL1073R-1) could reduce risks of catching the common cold and flu in human trials. It was assumed that immunostimulatory exopolysaccharide (EPS) produced from OLL1073R-1 play an important role in this context. However, few studies have examined the immunostimulatory effects of traditional Bulgarian yogurts fermented with different strains of lactobacilli and their metabolites. Therefore, we screened 139 L. delbrueckii ssp. bulgaricus strains and identified OLL1073R-1 as the most robust producer of EPS. This strain was also the only strain that induced the production of IFN-γ in vitro. Oral administration of the EPS or yogurt fermented with OLL1073R-1 and Streptococcus thermophilus OLS3059 (OLL1073R-1 yogurt) augmented natural killer (NK) cell activity and induced IFN-γ production in spleen cells in mice, whereas 2 other yogurts fermented with other strains had no effect on NK cell activity. Cellular preparations of the OLL1073R-1 strain also slightly augmented NK cell activity, but were less effective than EPS itself. The EPS-dependent stimulation of NK cell activity was abrogated in IFN-γ knockout mice and in myeloid differentiation factor 88 knockout mice. Furthermore, IFN-γ production from spleen cells stimulated with EPS was completely blocked with both anti-IL-12 and anti-IL-18 antibodies in vitro. These findings suggest that NK cell activation by OLL1073R-1 yogurt is EPS-dependent, occurs via IL-12- and IL-18-mediated IFN-γ production, and requires myeloid differentiation factor 88. We showed that traditional Bulgarian yogurt could exert immunostimulatory effects by selecting starter strains and part of the mechanisms depend on IFN-γ inducible EPS produced

  2. Putative lipoproteins identified by bioinformatic genome analysis of Leifsonia xyli ssp. xyli, the causative agent of sugarcane ratoon stunting disease.

    Science.gov (United States)

    Sutcliffe, Iain C; Hutchings, Matthew I

    2007-01-01

    SUMMARY Leifsonia xyli ssp. xyli is the causative agent of ratoon stunting disease, a major cause of economic loss in sugarcane crops. Understanding of the biology of this pathogen has been hampered by its fastidious growth characteristics in vitro. However, the recent release of a genome sequence for this organism has allowed significant novel insights. Further to this, we have performed a bioinformatic analysis of the lipoproteins encoded in the L. xyli genome. These analyses suggest that lipoproteins represent c. 2.0% of the L. xyli predicted proteome. Functional analyses suggest that lipoproteins make an important contribution to the physiology of the pathogen and may influence its ability to cause disease in planta. PMID:20507484

  3. Transformation of Chinese Cabbage (Brassica rapa L. ssp.pekinensis) by Agrobacterium Micro-Injection into Flower Bud

    Institute of Scientific and Technical Information of China (English)

    YAN Ji-yong; HE Yu-ke; CAO Jia-shu

    2003-01-01

    We obtained two lines of Chinese head cabbage (Brassica rapa L. ssp. pekinensis) selfed progenies containing both an anti-sense gene of BcpLH and a gene for resistance to kanamycin by micro-injecting buds of their primary transformants (T0) with Agrobacterium tumefaciens strain LBA4404. 31 positive plants resistant to kanamycien were recovered. Southern blot analysis confirmed the presence of T-DNA in two transgenic plants. One (DHZ-13-1) exhibits the characteristics of out-toward rosette and cauline leaves, and nested flower model in which secondary complete flower developed from the base of the primary ovary and the third flower from the ovary in the secondary flower, and so on, while another(DHZ-6-1) has no phenotype change. ABA and IAA affected the root growth of progeny of DHZ-13-1, but 6-BA was insensitive to hypocotyl growth during its seedling development.

  4. The biological effects of gamma irradiation on secondary embryoids of Brassica napus ssp. oleifera (Metzg.) Sinsk., winter oilseed rape

    International Nuclear Information System (INIS)

    The effects of gamma irradiation on secondary embryoids of Brassica napus ssp. oleifera (Metzg.) Sinsk., winter oilseed rape, are reported. A kill curve was established, and the secondary embryoids were found to be more tolerant of high doses of irradiation than tissues of many other plant species. Secondary embryoids which had received less than 320 Gy retained their secondary embryogenic potential at subsequent subcultures, although their potential to develop into plantlets was greatly reduced. A haploid line from the cultivar Rapora was found to be more sensitive to gamma irradiation than a diploid line from the cultivar Primor. A number of regenerant plants have been established from irradiated embryoids and grown on to flowering. (author)

  5. Preventative effects of a probiotic,Lactobacillus salivarius ssp.salivarius,in the TNBS model of rat colitis

    Institute of Scientific and Technical Information of China (English)

    Laura Peran; Julio Galvez; Desiree Camuesco; Monica Comalada; Ana Nieto; Angel Concha; Maria Paz Diaz-Ropero; Monica Olivares; Jordi Xaus; Antonio Zarzuelo

    2005-01-01

    AIM: To investigate the intestinal anti-inflammatory effect and mechanism of a probiotic Lactobacillus sakuvarius ssp.salivariusCECT5713 in the TNBS model of rat colitis.METHODS: Female Wistar rats (180-200 g) were used in this study. A group of rats were administered orally the probiotic L. salivarius ssp. salivarius (5×108 CFU suspended in 0.5 mL of skimmed milk) daily for 3 wk. Two additional groups were used for reference, a non-colitic and a control colitic without probiotic treatment, which received orally the vehicle used to administer the probiotic. Two weeks after starting the experiment, the rats were rendered colitic by intracolonic administration of 10 mg of TNBS dissolved in 0.25 mL of 500 mL/L ethanol. One week after colitis induction, all animals were killed and colonic damage was evaluated both histologically and biochemically. The biochemical studies performed in colonic homogenates include determination of myeloperoxidase (MPO) activity,glutathione (GSH) content, leukotriene B4 (LTB4) and tumor necrosis factor α (TNF-α) levels, as well as inducible nitric oxide synthase (iNOS) expression. In addition, the luminal contents obtained from colonic samples were used for microbiological studies, in order to determine Lactobacilli and Bifidobacteria counts.RESULTS: Treatment of colitic rats with L. salivarius ssp.salivarius resulted in amelioration of the inflammatory response in colitic rats, when compared with the corresponding control group without probiotic treatment. This antiinflammatory effect was evidenced macroscopically by a significant reduction in the extent of colonic necrosis and/or inflammation induced by the administration of TNBS/ethanol (2.3+0.4 cm vs3.4+0.3 cm in control group,P<0.01) and histologically by improvement of the colonic architecture associated with a reduction in the neutrophil infiltrate in comparison with non-treated colitic rats. The latter was confirmed biochemically by a significant reduction of colonic MPO

  6. Kinetics of Batch Fermentation in the Cultivation of a Probiotic Strain Lactobacillus Delbrueckii Ssp. Bulgaricus B1

    Directory of Open Access Journals (Sweden)

    Goranov Bogdan

    2015-07-01

    Full Text Available A comparative study of kinetic models to describe the dynamics of the fermentation process of culturing of a probiotic strain Lactobacillus delbrueckii ssp. bulgaricus B1 was performed. The models of Monod, Aiba, Tiessier, Hinshelwood and the equation of the logistic curve combined with the model of Ludeking-Piret were used. It has been found that the different models described the observed fermentation dynamics differently. The conducted comparative study demonstrated that the models of Monod and the equation of the logistic curve combined with the model of Ludeking-Piret were suitable for the description of the fermentation dynamics. The mathematical models showed no significant product and/or substrate inhibition. The culture developed with a low specific growth rate, but nevertheless it accumulated 1012-1013 viable cells. The substrate was absorbed primarily from cells in the stationary growth phase rather than cells in the exponential growth phase

  7. Morphologlcal and anatomical structure of generative organs of Salsola kali ssp. ruthenica (lljin Soó at the SEM level

    Directory of Open Access Journals (Sweden)

    Krystyna Idzikowska

    2011-04-01

    Full Text Available The morphology and anatomy of generative organs of Salsola kali ssp. ruthenica was examined in detail using the light (LM and scanning electron microscopy (SEM. The whole flowers, fruits and their parts (pistil, stamens, sepals, embryo, seed were observed in different developmental stages. In the first stage (June, flower buds were closed. In the second stage (August, flowers were ready for pollination/fertilization. In the third stage (September, fruits were mature. Additionally, the anatomical and morphological structure of sepals was observed by means of LM and SEM. Thanks to the transverse and longitudinal semi-sections through sepals, the first phase of wing formation was recorded by SEM. The appearance of stomata in the epidermal cells of sepals above the forming wings was very interesting, too. The stomata were observed also in mature fruits.

  8. Whole genome sequence of Treponema pallidum ssp. pallidum, strain Mexico A, suggests recombination between yaws and syphilis strains.

    Directory of Open Access Journals (Sweden)

    Helena Pětrošová

    Full Text Available BACKGROUND: Treponema pallidum ssp. pallidum (TPA, the causative agent of syphilis, and Treponema pallidum ssp. pertenue (TPE, the causative agent of yaws, are closely related spirochetes causing diseases with distinct clinical manifestations. The TPA Mexico A strain was isolated in 1953 from male, with primary syphilis, living in Mexico. Attempts to cultivate TPA Mexico A strain under in vitro conditions have revealed lower growth potential compared to other tested TPA strains. METHODOLOGY/PRINCIPAL FINDINGS: The complete genome sequence of the TPA Mexico A strain was determined using the Illumina sequencing technique. The genome sequence assembly was verified using the whole genome fingerprinting technique and the final sequence was annotated. The genome size of the Mexico A strain was determined to be 1,140,038 bp with 1,035 predicted ORFs. The Mexico A genome sequence was compared to the whole genome sequences of three TPA (Nichols, SS14 and Chicago and three TPE (CDC-2, Samoa D and Gauthier strains. No large rearrangements in the Mexico A genome were found and the identified nucleotide changes occurred most frequently in genes encoding putative virulence factors. Nevertheless, the genome of the Mexico A strain, revealed two genes (TPAMA_0326 (tp92 and TPAMA_0488 (mcp2-1 which combine TPA- and TPE- specific nucleotide sequences. Both genes were found to be under positive selection within TPA strains and also between TPA and TPE strains. CONCLUSIONS/SIGNIFICANCE: The observed mosaic character of the TPAMA_0326 and TPAMA_0488 loci is likely a result of inter-strain recombination between TPA and TPE strains during simultaneous infection of a single host suggesting horizontal gene transfer between treponemal subspecies.

  9. Differences between the rhizosphere microbiome of Beta vulgaris ssp. maritima - ancestor of all beet crops - and modern sugar beets

    Directory of Open Access Journals (Sweden)

    Christin eZachow

    2014-08-01

    Full Text Available The structure and function of the plant microbiome is driven by plant species and prevailing environmental conditions. Effectuated by breeding efforts, modern crops diverge genetically and phenotypically from their wild relatives but little is known about consequences for the associated microbiota. Therefore, we studied bacterial rhizosphere communities associated with the wild beet B. vulgaris ssp. maritima grown in their natural habitat soil from coastal drift lines (CS and modern sugar beets (Beta vulgaris ssp. vulgaris cultivated in CS and potting soil (PS under greenhouse conditions. Analysis of 16S rRNA gene fingerprints and pyrosequencing-based amplicon libraries revealed plant genotype- and soil-specific microbiomes. Wild beet plants harbor distinct operational taxonomic units (OTUs and a more diverse bacterial community than the domesticated sugar beet plants. Although the rhizospheres of both plant genotypes were dominated by Proteobacteria and Planctomycetes, 47.4% of dominant OTUs were additionally detected in the wild beet rhizosphere. Analysis of the cultivable fraction confirmed these plant genotype-specific differences at functional level. The proportion of isolates displayed in vitro activity against phytopathogens was lower for wild beet (≤45.8% than for sugar beet (≤57.5%. Conversely, active isolates from the wild beet exhibited stronger ability to cope with abiotic stresses. From all samples, active isolates of Stenotrophomonas rhizophila were frequently identified. In addition, soil type-specific impacts on the composition of bacterial communities were found: Acidobacteria, Chloroflexi, and Planctomycetes were only detected in plants cultivated in CS; whereas Bacteroidetes and Proteobacteria dominated in PS. Overall, in comparison to modern sugar beets, wild beets were associated with taxonomically and functionally distinct microbiomes.

  10. Whole Genome Sequence of Treponema pallidum ssp. pallidum, Strain Mexico A, Suggests Recombination between Yaws and Syphilis Strains

    Science.gov (United States)

    Pětrošová, Helena; Zobaníková, Marie; Čejková, Darina; Mikalová, Lenka; Pospíšilová, Petra; Strouhal, Michal; Chen, Lei; Qin, Xiang; Muzny, Donna M.; Weinstock, George M.; Šmajs, David

    2012-01-01

    Background Treponema pallidum ssp. pallidum (TPA), the causative agent of syphilis, and Treponema pallidum ssp. pertenue (TPE), the causative agent of yaws, are closely related spirochetes causing diseases with distinct clinical manifestations. The TPA Mexico A strain was isolated in 1953 from male, with primary syphilis, living in Mexico. Attempts to cultivate TPA Mexico A strain under in vitro conditions have revealed lower growth potential compared to other tested TPA strains. Methodology/Principal Findings The complete genome sequence of the TPA Mexico A strain was determined using the Illumina sequencing technique. The genome sequence assembly was verified using the whole genome fingerprinting technique and the final sequence was annotated. The genome size of the Mexico A strain was determined to be 1,140,038 bp with 1,035 predicted ORFs. The Mexico A genome sequence was compared to the whole genome sequences of three TPA (Nichols, SS14 and Chicago) and three TPE (CDC-2, Samoa D and Gauthier) strains. No large rearrangements in the Mexico A genome were found and the identified nucleotide changes occurred most frequently in genes encoding putative virulence factors. Nevertheless, the genome of the Mexico A strain, revealed two genes (TPAMA_0326 (tp92) and TPAMA_0488 (mcp2-1)) which combine TPA- and TPE- specific nucleotide sequences. Both genes were found to be under positive selection within TPA strains and also between TPA and TPE strains. Conclusions/Significance The observed mosaic character of the TPAMA_0326 and TPAMA_0488 loci is likely a result of inter-strain recombination between TPA and TPE strains during simultaneous infection of a single host suggesting horizontal gene transfer between treponemal subspecies. PMID:23029591

  11. Avaliação da atividade antimicrobiana e citotóxica de extratos de Gochnatia polymorpha ssp floccosa Evaluation of antimicrobial and cytotoxic activitiy of extracts from Gochnatia polymorpha (Less ssp floccosa

    Directory of Open Access Journals (Sweden)

    Maria Élida A. Stefanello

    2006-12-01

    Full Text Available Neste estudo procedeu-se a avaliação da atividade antimicrobiana e citotóxica de extratos de Gochnatia polymorpha ssp floccosa, espécie empregada na medicina popular contra doenças respiratórias. Folhas, cascas do tronco e ramos foram extraídos com hexano, diclorometano e etanol, sucessivamente, sendo obtidos os respectivos extratos brutos. A atividade antimicrobiana foi determinada pelo método de difusão em ágar utilizando-se bactérias Gram-positivas, Gram-negativas e fungos. A avaliação da citotoxicidade foi realizada empregando-se o ensaio de letalidade contra Artemia salina. Nenhum dos extratos mostrou atividade citotóxica. Os extratos das folhas apresentaram uma fraca atividade antimicrobiana frente a algumas cepas de Staphylococcus aureus e Streptococcus mutans, enquanto o extrato em diclorometano dos ramos e o extrato em etanol das cascas foram ativos contra Micrococcus luteus, Staphylococcus aureus e S. epidermidis. A maior atividade antimicrobiana foi observada para o extrato em diclorometano das cascas, que inibiu o crescimento de Micrococcus luteus, Staphylococcus aureus, S. epidermidis, Streptococcus mutans, Enterococcus faecalis e Candida albicans. Esta atividade parece estar relacionada à presença de diterpenos no extrato. Nenhum dos extratos estudados (a 5,0 mg/mL mostrou atividade frente a cepas de bactérias Gram-negativas. Esses resultados demonstram o potencial dessa planta como fonte de compostos antibacterianos e justificam, parcialmente, seu uso popular.The antimicrobial and cytotoxic activities of Gochnatia polymorpha ssp floccosa, a medicinal plant used against respiratory diseases, were evaluated. Successive petroleum ether, dichloromethane and ethanol extracts of dried leaves, trunk bark and stems were used in the brine shrimp lethality bioassay and tested against 22 strains of microorganisms (Gram-positive and Gram-negative bacteria and fungi by the well-diffusion agar method. None of the extracts

  12. Adjunct use of 3D-SSP analysis improves the ability to discriminate Alzheimer's disease from controls in visual inspection of brain SPECT. Examined by 16 inspectors belonging to 9 institutes

    International Nuclear Information System (INIS)

    Sixteen physicians interpreted 99mTc-ECD SPECT images in two sessions with or without 3D stereotactic surface projections (SSP) for 50 studies of Alzheimer's Disease (AD) patients and 40 studies of healthy volunteers. Mean areas under the receiver operating characteristic curves for visual interpretation of SPECT with 3D-SSP (0.778±0.060) was significantly greater than that for visual interpretation of SPECT alone (0.679±0.058). (author)

  13. Comparative cDNA-AFLP analysis of Cd-tolerant and -sensitive genotypes derived from crosses between the Cd hyperaccumulator Arabidopsis halleri and Arabidopsis lyrata ssp. petraea.

    Science.gov (United States)

    Craciun, Adrian Radu; Courbot, Mikael; Bourgis, Fabienne; Salis, Pietrino; Saumitou-Laprade, Pierre; Verbruggen, Nathalie

    2006-01-01

    Cadmium (Cd) tolerance seems to be a constitutive species-level trait in Arabidopsis halleri. In order to identify genes potentially implicated in Cd tolerance, a backcross (BC1) segregating population was produced from crosses between A. halleri ssp. halleri and its closest non-tolerant relative A. lyrata ssp. petraea. The most sensitive and tolerant genotypes of the BC1 were analysed on a transcriptome-wide scale by cDNA-amplified fragment length polymorphism (AFLP). A hundred and thirty-four genes expressed more in the root of tolerant genotypes than in sensitive genotypes were identified. Most of the identified genes showed no regulation in their expression when exposed to Cd in a hydroponic culture medium and belonged to diverse functional classes, including reactive oxygen species (ROS) detoxification, cellular repair, metal sequestration, water transport, signal transduction, transcription regulation, and protein degradation, which are discussed. PMID:16916885

  14. Chemical Composition and Antimicrobial Activity of the Essential Oils from Three Chemotypes of Origanum vulgare L. ssp. hirtum (Link Ietswaart Growing Wild in Campania (Southern Italy

    Directory of Open Access Journals (Sweden)

    Felice Senatore

    2009-07-01

    Full Text Available Essential oils obtained from inflorescences of three Origanum vulgare L.ssp. hirtum (Link Ietswaart samples, growing wild in different locations in Campania (Southern Italy, were analysed. Three chemotypes were found: the first, with a prevalence of carvacrol/thymol; the second, characterized by the prevalence of thymol/α-terpineol; the third, featuring a prevalence of linalyl acetate and linalool. This chemical study attempts to provide a contribution in shedding light on the relationship between chemical composition and biotypes and/or chemotypes in Origanum vulgare ssp. hirtum. The essential oils were also evaluated for their antibacterial activity against 10 selected microorganisms. The data obtained contribute to the future view to use the essential oils as natural preservatives for food products, due to their positive effect on their safety and shelf life.

  15. A Simplified PCR-SSP Method for HLA-A2 Subtype in a Population of Wuhan, China

    Institute of Scientific and Technical Information of China (English)

    Bing Liang; Lijun Zhu; Zhihui Liang; Xiufang Weng; Xiaoling Lu; Cai'e Zhang; Hui Li; Xiongwen Wu

    2006-01-01

    HLA-A2 is the most frequent HLA-A allele in all ethnic populations, and an important restriction element for peptide presentation to T cells in infectious disease and cancer. However, the HLA-A2 supertype consisting of up to 75 subtypes, mutation studies and analyses using cytotoxic T lymphocytes suggest the functional relevance of subtype-specific differences in HLA-A2 molecules for peptide binding and T-cell recognition. Therefore, it is necessary for T-cell response study to discriminate the HLA-A2 subtypes and to understand the profile of HLA-A2 allelic distribution in a given population. In this study, we developed a simple, robust approach based on the nested polymerase chain reaction using sequence-specific primers (PCR-SSP) to discriminate 17 HLA-A2 subtypes which cover the most HLA-A2 alleles (> 99% allele frequency) reported in Chinese, using 15 combinations of 19 allelic specific primers. In the first round of PCR, 3 combinations of 5 primers were used to determine whether the tested sample was HLA-A2 positive, meanwhile the subtypes of HLA-A*0209 and HLA-A*0215N were determined for the variant position of these two subtypes is in exon 4 instead of exon 2, 3. Samples of HLA-A2 positive were subtyped in the second round of PCR, using PCR products of the first round as templates. This strategy was applied to test the samples of 78 random HLA-A2 positive individuals for their HLA-A2 subtypes. Those samples were screened for HLA-A2 positive by the first round PCR-SSP from 154 healthy blood donors in Wuhan, China. The subtyping results were verified by using flow cytometric analysis (FCM) with HLA-A2 specific monoclonal antibody BB7.2 and DNA sequencing. The typing results of the samples show 50.7% random individuals in the population carry HLA-A2, HLA-A*0201 ranks the first (allele frequency = 15.5%), followed by A*0207 (5.8%),A*0206 (4.7%), A*0203 (2.6%), A*0210 (0.7%), and these 5 alleles account for 99.0% HLA-A2 subtypes of allele frequency. Our study

  16. Dual modes of transcriptional and translational initiation of SSP1, the gene for a mitochondrial HSP70, responding to heat-shock in Schizosaccharomyces pombe.

    OpenAIRE

    Kasai, H; Isono, K

    1991-01-01

    The SSP1 gene of Schizosaccharomyces pombe which is homologous to the SSC1 gene of Saccharomyces cerevisiae was cloned and its nucleotide sequence determined. A heat-shock element and three possible TATA boxes were found upstream of the coding region. Dual modes of transcriptional initiation were observed in primer extension analyses using as templates the mRNAs prepared from cells before and after heat-shock. Initiation sites situated 50 to 60 nucleotides downstream of the normal one were fo...

  17. Lutzomyia gasparviannai Martins, Godoy & Silva, 1962, probable vector of Leishmania mexicana ssp. in Viana municipality, Espírito Santo State, Brazil

    Directory of Open Access Journals (Sweden)

    Aloísio Falqueto

    1985-12-01

    Full Text Available Dos flebótomos atraídos pelo Proechimys iheringi numa área onde esse roedor foi achado naturalmente infectado por Leishmania mexicana ssp., 98,1% foram Lutzomyia gasparviannai, o que sugere que essa espécie não antropofílica seja o transmissor entre os roedores mas não habitualmente ao homem.

  18. Relationship between carbon catabolite repression and the biosynthesis regulation of the prolidase PepQ from Lactobacillus delbrueckii ssp. bulgaricus CNRZ 397

    OpenAIRE

    Lamarque, Mauld; Morel, Fabienne; Bissardon, Isabelle; Galinier, Anne; Portalier, Raymond; Atlan, Danièle

    2001-01-01

    International audience Lactobacillus delbrueckii ssp. bulgaricus CNRZ 397 (L. bulgaricus) displays several enzymes specific of proline-containing peptides. We focused on the prolidase PepQ which specifically cleaves X-Pro dipeptides. PepQ biosynthesis was previously shown to be independent of the peptide concentration of the culture medium in contrast to the cell surface proteinase PrtB and several aminopeptidases. Regulation of PepQ biosynthesis can be explained by the genetic organizatio...

  19. Targeted Sequence Capture Provides Insight into Genome Structure and Genetics of Male Sterility in a Gynodioecious Diploid Strawberry, Fragaria vesca ssp. bracteata (Rosaceae)

    OpenAIRE

    Tennessen, Jacob A.; Govindarajulu, Rajanikanth; Liston, Aaron; Ashman, Tia-Lynn

    2013-01-01

    Gynodioecy is a sexual system wherein females coexist with hermaphrodites. It is of interest not only because male-sterile plants are advantageous in plant breeding but also because it can be a crucial step in the evolutionary transition to entirely separate sexes (dioecy) from a hermaphroditic ancestor. The gynodioecious diploid wild strawberry, Fragaria vesca ssp. bracteata (Rosaceae), is a member of a clade with both dioecious and cultivated species, making it an ideal model in which to st...

  20. Antiphytoviral Activity of Satureja montana L. ssp. variegata (Host) P. W. Ball Essential Oil and Phenol Compounds on CMV and TMV

    OpenAIRE

    Dubravka Cukrov; Elma Vuko; Valerija Dunkić; Nada Bezić

    2010-01-01

    The essential oil of Satureja montana L. ssp. variegata (Host) P. W. Ball (Lamiaceae) was characterized by a high concentration of oxygenated monoterpenes (71.3%), among which carvacrol (19.4%) and thymol (16.6%) were the major compounds. When the essential oil was applied on local hosts Chenopodium amaranticolor Coste & Reyn. and Chenopodium quinoa Willd. simultaneously with the infecting virus, the number of local lesions on both Tobacco mosaic virus (TMV) and Cucumber mosaic virus (CMV...

  1. Determination of ACC-induced cell-programmed death in roots of Vicia faba ssp. minor seedlings by acridine orange and ethidium bromide staining

    OpenAIRE

    Byczkowska, Anna; Kunikowska, Anita; Kaźmierczak, Andrzej

    2012-01-01

    Fluorescence staining with acridine orange (AO) and ethidium bromide (EB) showed that nuclei of cortex root cells of 1-aminocyclopropane-1-carboxylic acid (ACC)-treated Vicia faba ssp. minor seedlings differed in color. Measurement of resultant fluorescence intensity (RFI) showed that it increased when the color of nuclear chromatin was changed from green to red, indicating that EB moved to the nuclei via the cell membrane which lost its integrity and stained nuclei red. AO/EB staining showed...

  2. Production of intergeneric allotetraploid between autotetraploid non-heading Chinese cabbage (Brassica campestris ssp. chinensis Makino) and autotetraploid radish (Raphanus sativus L.)

    OpenAIRE

    Sun Cheng-Zhen; Li Ying; Zhang Shu-Ning; Zheng Jin-Shuang

    2014-01-01

    Intergeneric hybrids between non-heading Chinese cabbage (Brassica campestris ssp. chinensis Makino; 2n = 4x = 40) and radish (Raphanus sativus L.; 2n = 4x = 36) were obtained through ovary culture and embryo rescue. Some hybrid embryos (0.11 per ovary) were produced, but only 4 of them germinated. As most hybrid embryos failed to develop into plantlets directly, plants were regenerated by inducing shoots on the cultured cotyledon and inducing roots on the root induction medium. All hybrid pl...

  3. Cross-border outbreak of Salmonella enterica ssp. enterica serovar Bovismorbificans: multiple approaches for an outbreak investigation in Germany and Switzerland

    OpenAIRE

    Knoblauch, Astrid M; Bratschi, Martin W.; Zuske, Meike K; Althaus, Denise; Stephan, Roger; Hächler, Herbert; Baumgartner, Andreas; Prager, Rita; Rabsch, Wolfgang; Altpeter, Ekkehardt; Jost, Marianne; Mäusezahl, Mirjam; Hatz, Christoph; Kiefer, Sabine

    2015-01-01

    QUESTION UNDER STUDY: In July 2014, an outbreak of Salmonella enterica ssp. enterica serovar Bovismorbificans was detected in Switzerland. The goal of the outbreak investigation was to rapidly identify and eliminate the contamination source in order to prevent new cases. METHODS: A case-case study design was applied comprising reported cases of S. Bovismorbificans and cases of other serovars. A trawling questionnaire was administered by telephone interview. Data were collected for 34 cases...

  4. Chemical Composition, Nutritive and Energetic Value of Plantain (Musa ssp.) Hybrids CRBP 14, CRBP 39, FHIA 17, FHIA 21and Orishele Variety

    OpenAIRE

    Coulibaly, S.; Nemlin, GJ.; Kamenan, A.

    2007-01-01

    Chemical characteristics as well as contents in main components such as dry matter, sugars, lipids proteins and some minerals were determined in four banana hybrids CRBP 14, CRBP 39, FHIA 17, FHIA 21 and Orishele variety (used as control). Titrable acidity, pH, and calorific energy of these various cultivars of banana (Musa ssp.) were also determined. The results indicated that Orishele variety had the highest content of dry matter, total carbohydrate and potassium. On the other hand, CRBP 39...

  5. Chemical Composition of Ballota macedonica Vandas and Ballota nigra L. ssp. foetida (Vis.) Hayek Essential Oils - The Chemotaxonomic Approach.

    Science.gov (United States)

    Đorđević, Aleksandra S; Jovanović, Olga P; Zlatković, Bojan K; Stojanović, Gordana S

    2016-06-01

    The essential oils isolated from fresh aerial parts of Ballota macedonica (two populations) and Ballota nigra ssp. foetida were analyzed by GC and GC/MS. Eighty five components were identified in total; 60 components in B. macedonica oil (population from the Former Yugoslav Republic of Macedonia), 34 components in B. macedonica oil (population from the Republic of Serbia), and 33 components in the oil of B. nigra ssp. foetida accounting for 93.9%, 98.4%, and 95.8% of the total oils, respectively. The most abundant components in B. macedonica oils were carotol (13.7 - 52.1%), germacrene D (8.6 - 24.6%), and (E)-caryophyllene (6.5 - 16.5%), while B. nigra ssp. foetida oil was dominated by (E)-phytol (56.9%), germacrene D (10.0%), and (E)-caryophyllene (4.7%). Multivariate statistical analyses (agglomerative hierarchical cluster analysis and principal component analysis) were used to compare and discuss relationships among Ballota species examined so far based on their volatile profiles. The chemical compositions of B. macedonica essential oils are reported for the first time. PMID:27144646

  6. Analysis of early phase [11C]BF-227 PET, and its application for anatomical standardization of late-phase images for 3D-SSP analysis

    International Nuclear Information System (INIS)

    To examine the usefulness of the early phase [11C]BF-227 positron emission tomography (PET) for (1) conferring additional diagnostic value by providing perfusion-like information and (2) obtaining the appropriate anatomical standardization (AS) using three-dimensional stereotactic surface projection (3D-SSP) method. This study included 20 mild cognitive impairment (MCI), 19 Alzheimer's disease (AD), and 17 normal cognitive (NC) subjects. Early- and late-phase BF-227 PET images were obtained 0-10 and 40-60 min after the injection, respectively. AS for late-phase BF-227 images were performed by 2 methods: (1) method A, for AS of late-phase BF-227 images using 8F-fluorodeoxyglucose (FDG) images of the same subject and (2) method B, for AS of late-phase BF-227 images using early phase BF-227 images. Method B was successfully used for AS in all cases. The Z score maps of 3D-SSP analyses of FDG PET and early phase BF-227 PET for AD and MCI groups showed a typical AD-like pattern. Regional analyses revealed that the early phase BF-227 PET showed significant differences between AD and NC, and MCI and NC. The early phase BF-227 PET images showed significant abnormal findings for the AD and MCI groups. AS of late-phase BF-227 images using early phase BF-227 images were successful, and enabled appropriate 3D-SSP analyses. (author)

  7. Optimization of Ultrasound-Assisted Extraction of Arbutin from Leaves of Pyrus elaeagnifolia Pallas ssp. elaeagnifolia (Rosaceae by Response Surface Methodology Mehtap

    Directory of Open Access Journals (Sweden)

    DONMEZ SAHIN

    2016-01-01

    Full Text Available Pyrus elaeagnifolia Pallas. ssp. elaeagnifolia is a medicinal plant used in traditional medicine for the treatment of various diseases in Turkey. The leaves of Pyrus elaeagnifolia ssp. elaeagnifolia are a rich source of arbutin, which is a naturally occurring derivative of hydroquinone. It is found in various plant species belonging to diverse families, such as Lamiaceae, Ericaceae, Saxifragaceae and Rosaceae. It inhibits tyrosinase and has been employed as a cosmetic skin whitening agent. In this study, Response Surface Methodology (RSM using a Box Behnken Design (BBD was employed to optimize the condition for extraction of arbutin from the leaves of Pyrus elaeagnifolia ssp. elaeagnifolia. Three influencing factors; methanol concentration, period of ultrasoundassisted extraction and extraction temperature were investigated in the ultrasonic aqueous extraction. The Response Surface Methodology was applied to optimize the extraction process focused on arbutin content with respect to the above influencing factors. The best combination of each significant factor was determined by RSM design and optimum pretreatment conditions for maximum arbutin content were established to be methanol concentration of 48.54 %, extraction time of 39.32 min. And extraction temperature of 43.71 0C. Under these conditions 5.37 % of arbutin content was observed experimentally, similar to the theoretical prediction of 5.30 %.

  8. Further molecular evidence for the Hordeum vulgare ssp. spontaneum in Tibet as ultimate progenitor of Chinese cultivated barley

    Institute of Scientific and Technical Information of China (English)

    2005-01-01

    106 accessions of Tibetan wild barley, including 50 accessions of the two-rowed wild barley Hordeum vulgare ssp. spontaneum(HS), 27 accessions of the six-rowed bottle-shaped wild barley H. lagunculiforme(HL) and 29 accessions of the six-rowed wild barley H. agriocrithon(HA) that separately represent different agrigeographical regions of Tibet, were used to study the genetic diversity and genetic differentiation using SSR markers selected from seven barley linkage groups. 229 allelic variants were identified with an average of 7.6 alleles/locus. The average of total number of alleles per locus in HA(6.4) is much higher than that in HS(3.9) and HL(3.4). The genetic diversity and its standard deviation among the three subspecies were in the order of HS>HL>HA. Very significant genetic differentiation was observed among the three subspecies of wild barley. Comparisons of the results from this and previous studies showed a strong Oriental-Occidental differentiation of barley, and that Shannan region of Tibet might be the center of origin of the Tibetan two-rowed wild barley, thus supporting not only the hypothesis of a mono-phyletic origin of cultivated barley but also the proposition that the Tibetan two-rowed wild barley as ultimate progenitor of Chinese cultivated barley.

  9. Sea Buckthorn (Hippophaë rhamnoides ssp. rhamnoides) Berries in Nordic Environment: Compositional Response to Latitude and Weather Conditions.

    Science.gov (United States)

    Zheng, Jie; Kallio, Heikki; Yang, Baoru

    2016-06-22

    Flavonol glycosides (FGs) in sea buckthorn (Hippophaë rhamnoides ssp. rhamnoides) berries of varieties 'Tytti' and 'Terhi', cultivated in northern Finland (68°02' N) for six years and southern Finland (60°23' N) for seven years, were investigated and compared by HPLC-DAD-ESI-MS/MS. The average total content of 23 identified glycosides of isorhamnetin and quercetin was 103 ± 23 and 110 ± 21 mg/100 g fresh berries in 'Terhi' and 'Tytti', respectively. The total contents of FGs, flavonol diglycosides, and triglycosides in both varieties were higher in the north than in the south, whereas total flavonol monoglycoside content behaved vice versa (p weather variables studied, the sum of the daily mean temperatures that are 5 °C or higher from the start of growth season until the day of harvest was the most important variable which associated negatively with the accumulation of FGs in berries. Such influence was much stronger in berries from the north than from the south. PMID:27215398

  10. Combining ability and heterosis for yield and yield contributing traits in brassica rapa (l.) ssp. dichotoma (roxb.) hanelt

    International Nuclear Information System (INIS)

    Combining ability was studied for yield and yield contributing traits in 5 * 5 diallel cross in Brassica rapa (L.) ssp. dichotoma (Roxb.) Hanelt. Primary branches plant-1, pods main raceme-1, pod length, 100-seed weight and seed yield plant-1 were significantly different. Heritability and genetic advance estimates were moderate for primary branches plant-1, pods main raceme-1, 100 seed weight whereas were high for seed yield plant-1. Parental line G-909 for primary branches plant-1, pods main raceme-1 and seed yield plant-1, genotype G-902 for pod length and genotype G-403 for 100-seed weight were the best general combiners. Based on combing ability and heterosis, the F1 hybrids G-909 * G-265 (for primary branches plant-1), G-265 * G- 403, G-1500 * G-909 (for pods main raceme-1), G-403 * G-909 (for pod length), G-265 * G-1500 (for 100-seed weight) and G-1500 * G-902, G-909 * G-902 (for seed yield plant-1) can be utilized in future breeding endeavors. Non-additive genetic control, as predominant mechanism, for all the traits necessitates the use of schemes like bi-parental mating design, diallel selective mating followed by recurrent or reciprocal recurrent selection. (author)

  11. [Outbreak of subclinical mastitis due to beta hemolytic group L streptococci (S. dysgalactiae ssp. equisimilis) in an Austrian dairy herd].

    Science.gov (United States)

    Baumgartner, Martina; Giffinger, Friederike; Hoppe, Jan Christoph; Spergser, Joachim

    2011-01-01

    This study is reporting an outbreak of subclinical mastitis due to beta-hemolytic group L streptococci in an Austrian dairy herd with a history of high somatic cell count. At the first survey 16 of 33 lactating cows (28 quarters of 132) were cultured positive for beta-hemolytic, CAMP and esculin negative cocci that grew on Columbia blood agar with small grey catalase negative colonies. With the commercial API 20 Strep system (bioMerieux, F) isolates were classified as members of streptococci group L. All tested strains (eight of 28) produced acid from ribose, lactose, trehalose, amidon and glycogen; they hydrolysed hippurate and showed beta-glucuronidase, beta-galactosidase, alkaline phosphatase, leucinaminopeptidase and arginindehydrolase activity. Isolates were sensitive to bacitracin but resistant to tetracycline. Using phenotypic characterisation as well as sequence analysis of the 16S-23S intergenic spacer region of a representative strain, recovered isolates were identified as Streptococcus (S.) dysgalactiae ssp. equisimilis. Mastitis was characterized by normal milk secretions and absence of clinical abnormalities but high elevations of somatic cell count. Based on the characteristics of the strains and on the observations during the first herd survey, contagious transmission during milking as a result of poor milking hygiene was assumed. The mastitis was controlled through implementation of a strict hygiene protocol including use of single-use udder towels, post milking teat desinfection and cluster disinfection between milking cows in combination with antibiotic treatment of infected udders. PMID:22059292

  12. Shelf-life extension of minimally processed and gamma irradiated red beet (Beta vulgaris ssp. vulgaris L.), Cv. early wonder

    Energy Technology Data Exchange (ETDEWEB)

    Hernandes, Nilber Kenup; Vital, Helio de Carvalho [Centro Tecnologico do Exercito (CTEx), Rio de Janeiro, RJ (Brazil). Div. de Defesa Quimica, Biologica e Nuclear (DDQBN)]. E-mail: nilberkenup@ctex.eb.br; vital@ctex.eb.br; Coneglian, Regina Celi Cavestre [Universidade Federal Rural do Rio de Janeiro (UFRRJ), Seropedica, Rio de Janeiro, RJ (Brazil). Inst.de Agronomia. Dept. de Fitotecnia]. E-mail: rccconeg@ufrrj.br; Godoy, Ronoel Luiz de Oliveira [EMBRAPA Agroindustria de Alimentos, Rio de Janeiro, RJ (Brazil)]. E-mail: ronoel@ctaa.embrapa.br

    2007-07-01

    This work investigated the effects of gamma irradiation on the shelf-life extension and safety of minimally processed red beet (Beta vulgaris ssp. vulgaris L.) by performing microbiological, chemical and sensory analyses. Red beets were harvested 73 days after transplanting and their tuberous parts were minimally processed and separated in two groups: control (non-irradiated) and irradiated (0.5, 1.0 and 1.5 kGy). Tests for Salmonella sp., total and fecal coliforms, total count of aerobic mesophilic and lactic-acid bacteria were performed during the 21-day storage at 8 deg C. They indicated that the samples irradiated with 1.0 and 1.5 kGy remained in good conditions throughout storage while the unirradiated samples did not last 7 days. Chemical analyses indicated that the concentrations of vitamins B1 and B2 were not affected by irradiation. In contrast the amounts of fructose and glucose increased during storage while the one for sucrose decreased. In addition four series of sensory evaluations including appearance and aroma indicated that the samples irradiated with 1.0 and 1.5 kGy remained good for consumption for 20 days. Therefore it was concluded that the use of the doses of 1.0 and 1.5 kGy produced the best effects on the conservation of the samples without harming the sensory characteristics and nutritional constituents tested. (author)

  13. Lipidation of the FPI protein IglE contributes to Francisella tularensis ssp. novicida intramacrophage replication and virulence.

    Science.gov (United States)

    Nguyen, Jesse Q; Gilley, Ryan P; Zogaj, Xhavit; Rodriguez, Stephen A; Klose, Karl E

    2014-10-01

    Francisella tularensis is a Gram-negative bacterium responsible for the human disease tularemia. The Francisella pathogenicity island (FPI) encodes a secretion system related to type VI secretion systems (T6SS) which allows F. tularensis to escape the phagosome and replicate within the cytosol of infected macrophages and ultimately cause disease. A lipoprotein is typically found encoded within T6SS gene clusters and is believed to anchor portions of the secretion apparatus to the outer membrane. We show that the FPI protein IglE is a lipoprotein that incorporates (3)H-palmitate and localizes to the outer membrane. A C22G IglE mutant failed to be lipidated and failed to localize to the outer membrane, consistent with C22 being the site of lipidation. Francisella tularensis ssp. novicida expressing IglE C22G is defective for replication in macrophages and unable to cause disease in mice. Bacterial two-hybrid analysis demonstrated that IglE interacts with the C-terminal portion of the FPI inner membrane protein PdpB, and PhoA fusion analysis indicated the PdpB C-terminus is located within the periplasm. We predict this interaction facilitates channel formation to allow secretion through this system. PMID:24616435

  14. Experimental weed control of Najas marina ssp. intermedia and Elodea nuttallii in lakes using biodegradable jute matting

    Directory of Open Access Journals (Sweden)

    Markus A. Hoffmann

    2013-10-01

    Full Text Available The use of jute matting in managing the invasive aquatic macrophyte species Elodea nuttallii (Planch. H. St. John and Najas marina ssp. intermedia (Wolfg. ex Gorski Casper (Najas intermedia was studied in laboratory experiments and field trials. Four German lakes with predominant population of Najas intermedia or Elodea nuttalli were chosen for the experiment and areas between 150 and 300 m² were covered with jute textile. The effect of the matting on the growth of invasive and non-invasive macrophytes was determined through comparison with control transects. Biodegradable jute matting successfully suppressed the invasive macrophyte Najas intermedia and significantly reduced the growth of Elodea nuttalli in lakes. The results indicate that the capability of the matting to inhibit the growth of Elodea nuttallii and Najas intermedia depends on the mesh size of the jute weaving and that environmental conditions can affect its efficiency. Various indigenous species like Charales or Potamogeton pusillus L. were able to grow through the jute fabric and populate the treated areas. Until the end of the vegetation period, none of the invasive species were able to penetrate the covering and establish a stable population; in fact, in the subsequent year the jute matting affected only the spread of Najas intermedia. Jute matting proved to be an easy-to-use and cheap method to control the growth of Elodea nuttallii and Najas intermedia.

  15. The fate of W chromosomes in hybrids between wild silkmoths, Samia cynthia ssp.: no role in sex determination and reproduction.

    Science.gov (United States)

    Yoshido, A; Marec, F; Sahara, K

    2016-05-01

    Moths and butterflies (Lepidoptera) have sex chromosome systems with female heterogamety (WZ/ZZ or derived variants). The maternally inherited W chromosome is known to determine female sex in the silkworm, Bombyx mori. However, little is known about the role of W chromosome in other lepidopteran species. Here we describe two forms of the W chromosome, W and neo-W, that are transmitted to both sexes in offspring of hybrids from reciprocal crosses between subspecies of wild silkmoths, Samia cynthia. We performed crosses between S. c. pryeri (2n=28, WZ/ZZ) and S. c. walkeri (2n=26, neo-Wneo-Z/neo-Zneo-Z) and examined fitness and sex chromosome constitution in their hybrids. The F1 hybrids of both reciprocal crosses had reduced fertility. Fluorescence in situ hybridization revealed not only the expected sex chromosome constitutions in the backcross and F2 hybrids of both sexes but also females without the W (or neo-W) chromosome and males carrying the W (or neo-W) chromosome. Furthermore, crosses between the F2 hybrids revealed no association between the presence or absence of W (or neo-W) chromosome and variations in the hatchability of their eggs. Our results clearly suggest that the W (or neo-W) chromosome of S. cynthia ssp. plays no role in sex determination and reproduction, and thus does not contribute to the formation of reproductive barriers between different subspecies. PMID:26758188

  16. The maize (Zea mays ssp. mays var. B73 genome encodes 33 members of the purple acid phosphatase gene family

    Directory of Open Access Journals (Sweden)

    Eliécer eGonzález Muñoz

    2015-05-01

    Full Text Available Purple acid phosphatases (PAPs play an important role in plant phosphorus nutrition, both by liberating phosphorus from organic sources in the soil and by modulating distribution within the plant throughout growth and development. Furthermore, members of the PAP protein family have been implicated in a broader role in plant mineral homeostasis, stress responses and development. We have identified 33 candidate PAP encoding gene models in the maize (Zea mays ssp. mays var. B73 reference genome. The maize Pap family includes a clear single-copy ortholog of the Arabidopsis gene AtPAP26, shown previously to encode both major intracellular and secreted acid phosphatase activities. Certain groups of PAPs present in Arabidopsis, however, are absent in maize, while the maize family contains a number of expansions, including a distinct radiation not present in Arabidopsis. Analysis of RNA-sequencing based transcriptome data revealed accumulation of maize Pap transcripts in multiple plant tissues at multiple stages of development, and increased accumulation of specific transcripts under low phosphorus availability. These data suggest the maize PAP family as a whole to have broad significance throughout the plant life cycle, while highlighting potential functional specialization of individual family members.

  17. Transcriptomic profiling of the salt stress response in excised leaves of the halophyte Beta vulgaris ssp. maritima.

    Science.gov (United States)

    Skorupa, Monika; Gołębiewski, Marcin; Domagalski, Krzysztof; Kurnik, Katarzyna; Abu Nahia, Karim; Złoch, Michał; Tretyn, Andrzej; Tyburski, Jarosław

    2016-02-01

    Beta vulgaris ssp. maritima is a halophytic relative of cultivated beets. In the present work a transcriptome response to acute salt stress imposed to excised leaves of sea beet was investigated. Salt treatments consisted of adding NaCl directly to the transpiration stream by immersing the petioles of excised leaves into the salt solutions. Sequencing libraries were generated from leaves subjected to either moderate or strong salt stress. Control libraries were constructed from untreated leaves. Sequencing was performed using the Illumina MiSeq platform. We obtained 32970 unigenes by assembling the pooled reads from all the libraries with Trinity software. Screening the nr database returned 18,362 sequences with functional annotation. Using the reference transcriptome we identified 1,246 genes that were differentially expressed after 48 h of NaCl stress. Genes related to several cellular functions such as membrane transport, osmoprotection, molecular chaperoning, redox metabolism or protein synthesis were differentially expressed in response to salt stress. The response of sea beet leaves to salt treatments was marked out by transcriptomic up-regulation of genes related to photosynthetic carbon fixation, ribosome biogenesis, cell wall-building and cell wall expansion. Furthermore, several novel and undescribed transcripts were responsive to salinity in leaves of sea beet. PMID:26795151

  18. Identification of surface-associated proteins of Bifidobacterium animalis ssp. lactis KLDS 2.0603 by enzymatic shaving.

    Science.gov (United States)

    Zhu, Dequan; Sun, Yu; Liu, Fei; Li, Aili; Yang, Limei; Meng, Xiang-Chen

    2016-07-01

    Bifidobacteria are commensal microorganisms of the human and animal intestinal tract, and their surface proteins can mediate bacterial communication and chemical sensing in the environment, as well as facilitate interactions between bacteria and the host. However, a systematic study of the outer surface-associated proteome of bifidobacteria has not been undertaken. In the present study, the proteins located on the surface of Bifidobacterium animalis ssp. lactis KLDS 2.0603 were systematically identified by a nongel proteomic approach, which consisted of the shaving of the bacterial surface with trypsin and an analysis of the released peptides by liquid chromatography-tandem mass spectrometry. A total of 105 surface-associated proteins were found, of which 15 proteins could potentially be involved in adhesion and interactions between bifidobacteria and the host. The proteins related to adhesion and interaction between bacteria and the host include pilus structure proteins (Fim A, Fim B), 10 moonlighting proteins, an NLP/P60 family protein, an immunogenic secreted protein, and a putative sugar-binding secreted protein. The results provide the basis for future studies on the molecular mechanisms of the interactions between bifidobacteria and the host. PMID:27132091

  19. A novel vaccine against Streptococcus equi ssp. zooepidemicus infections: the recombinant swinepox virus expressing M-like protein.

    Science.gov (United States)

    Lin, Hui-xing; Huang, Dong-yan; Wang, Ye; Lu, Cheng-ping; Fan, Hong-jie

    2011-09-16

    To develop a safer, more immunogenic and efficacious vaccine against Streptococcus equi ssp. zooepidemicus (SEZ) infections, the gene of M-like protein (SzP) was placed under the strong vaccinia virus promoter P28 and then inserted into swinepox virus (SPV) genome. The recombinant swinepox virus (rSPV-szp) was isolated in a non-selective medium by the co-expression of Escherichia coli LacZ gene and verified by PCR, western blotting and immunofluorescence assays. To evaluate the immunogenicity of this rSPV-szp, ICR mice were immunized with the rSPV-szp, inactivated SEZ vaccine (positive control), wild type SPV (negative control), or PBS (challenge control). All mice were intraperitoneally challenged with 5 LD(50) of homogenous ATCC 35246 strain 14 days post-vaccination. The results showed that at least 70% mice in rSPV-szp-vaccinated group were protected against homogenous ATCC 35246 challenge, the survival rate was significantly higher compared with mice in the negative control group and the challenge control group (Panalysis showed a marked increased in levels of IL-4 and IFN-γ mRNA in immunized mice. The results suggested that the recombinant rSPV-szp provided mice with significant protection from the SEZ infections. It is a promising candidate for the vaccine development against SEZ infections. PMID:21807055

  20. Analysis of expressed sequence tags from Musa acuminata ssp. burmannicoides, var. Calcutta 4 (AA) leaves submitted to temperature stresses.

    Science.gov (United States)

    Santos, C M R; Martins, N F; Hörberg, H M; de Almeida, E R P; Coelho, M C F; Togawa, R C; da Silva, F R; Caetano, A R; Miller, R N G; Souza, M T

    2005-05-01

    In order to discover genes expressed in leaves of Musa acuminata ssp. burmannicoides var. Calcutta 4 (AA), from plants submitted to temperature stress, we produced and characterized two full-length enriched cDNA libraries. Total RNA from plants subjected to temperatures ranging from 5 degrees C to 25 degrees C and from 25 degrees C to 45 degrees C was used to produce a COLD and a HOT cDNA library, respectively. We sequenced 1,440 clones from each library. Following quality analysis and vector trimming, we assembled 2,286 sequences from both libraries into 1,019 putative transcripts, consisting of 217 clusters and 802 singletons, which we denoted Musa acuminata assembled expressed sequence tagged (EST) sequences (MaAES). Of these MaAES, 22.87% showed no matches with existing sequences in public databases. A global analysis of the MaAES data set indicated that 10% of the sequenced cDNAs are present in both cDNA libraries, while 42% and 48% are present only in the COLD or in the HOT libraries, respectively. Annotation of the MaAES data set categorized them into 22 functional classes. Of the 2,286 high-quality sequences, 715 (31.28%) originated from full-length cDNA clones and resulted in a set of 149 genes. PMID:15841358

  1. A novel suicide shuttle plasmid for Streptococcus suis serotype 2 and Streptococcus equi ssp. zooepidemicus gene mutation

    Science.gov (United States)

    Liu, Rui; Zhang, Ping; Su, Yiqi; Lin, Huixing; Zhang, Hui; Yu, Lei; Ma, Zhe; Fan, Hongjie

    2016-01-01

    The mariner-based Himar1 system has been utilized for creating mutant libraries of many Gram-positive bacteria. Streptococcus suis serotype 2 (SS2) and Streptococcus equi ssp. zooepidemicus (SEZ) are primary pathogens of swine that threaten the swine industry in China. To provide a forward-genetics technology for finding virulent phenotype-related genes in these two pathogens, we constructed a novel temperature-sensitive suicide shuttle plasmid, pMar4s, which contains the Himar1 system transposon, TnYLB-1, and the Himar1 C9 transposase from pMarA and the repTAs temperature-sensitive fragment from pSET4s. The kanamycin (Kan) resistance gene was in the TnYLB-1 transposon. Temperature sensitivity and Kan resistance allowed the selection of mutant strains and construction of the mutant library. The SS2 and SEZ mutant libraries were successfully constructed using the pMar4s plasmid. Inverse-Polymerase Chain Reaction (Inverse-PCR) results revealed large variability in transposon insertion sites and that the library could be used for phenotype alteration screening. The thiamine biosynthesis gene apbE was screened for its influence on SS2 anti-phagocytosis; likewise, the sagF gene was identified to be a hemolytic activity-related gene in SEZ. pMar4s was suitable for mutant library construction, providing more information regarding SS2 and SEZ virulence factors and illustrating the pathogenesis of swine streptococcosis. PMID:27256117

  2. Shelf-life extension of minimally processed and gamma irradiated red beet (Beta vulgaris ssp. vulgaris L.), Cv. early wonder

    International Nuclear Information System (INIS)

    This work investigated the effects of gamma irradiation on the shelf-life extension and safety of minimally processed red beet (Beta vulgaris ssp. vulgaris L.) by performing microbiological, chemical and sensory analyses. Red beets were harvested 73 days after transplanting and their tuberous parts were minimally processed and separated in two groups: control (non-irradiated) and irradiated (0.5, 1.0 and 1.5 kGy). Tests for Salmonella sp., total and fecal coliforms, total count of aerobic mesophilic and lactic-acid bacteria were performed during the 21-day storage at 8 deg C. They indicated that the samples irradiated with 1.0 and 1.5 kGy remained in good conditions throughout storage while the unirradiated samples did not last 7 days. Chemical analyses indicated that the concentrations of vitamins B1 and B2 were not affected by irradiation. In contrast the amounts of fructose and glucose increased during storage while the one for sucrose decreased. In addition four series of sensory evaluations including appearance and aroma indicated that the samples irradiated with 1.0 and 1.5 kGy remained good for consumption for 20 days. Therefore it was concluded that the use of the doses of 1.0 and 1.5 kGy produced the best effects on the conservation of the samples without harming the sensory characteristics and nutritional constituents tested. (author)

  3. TP0262 is a modulator of promoter activity of tpr Subfamily II genes of Treponema pallidum ssp. pallidum.

    Science.gov (United States)

    Giacani, Lorenzo; Godornes, Charmie; Puray-Chavez, Maritza; Guerra-Giraldez, Cristina; Tompa, Martin; Lukehart, Sheila A; Centurion-Lara, Arturo

    2009-06-01

    Transcriptional regulation in Treponema pallidum ssp. pallidum is poorly understood, primarily because this organism cannot be cultivated in vitro or genetically manipulated. We have recently shown a phase variation mechanism controlling transcription initiation of Subfamily II tpr (T. pallidumrepeat) genes (tprE, tprG and tprJ), a group of virulence factor candidates. Furthermore, the same study suggested that additional mechanisms might influence the level of transcription of these tprs. The T. pallidum genome sequence has revealed a few open reading frames with similarity to known bacterial transcription factors, including four catabolite activator protein homologues. In this work, sequences matching the Escherichia coli cAMP receptor protein (CRP) binding motif were identified in silico upstream of tprE, tprG and tprJ. Using elecrophoretic mobility shift assay and DNaseI footprinting assay, recombinant TP0262, a T. pallidum CRP homologue, was shown to bind specifically to amplicons obtained from the tpr promoters containing putative CRP binding motifs. Using a heterologous reporter system, binding of TP0262 to these promoters was shown to either increase (tprE and tprJ) or decrease (tprG) tpr promoter activity. This is the first characterization of a T. pallidum transcriptional modulator that influences tpr promoter activity. PMID:19432808

  4. 滇北球花报春多倍体诱导及核型分析%Polyploid Induction and Karyomorphological Studies of Primula denticulata ssp.sinodenticulata

    Institute of Scientific and Technical Information of China (English)

    张超; 李枝林; 李佳; 张婷; 蒋亚莲; 李涵

    2011-01-01

    Tetraploids were induced from in vitro plantlets of diploid Primula denticulata ssp.sinodenticulata by dipping shoot tips in colchicine solutions at different concentrations and treating durations.The results showed:the best condation was treatment with 0.6% colchicines for 72 h,and the induction rate was 54 %.Mutation buds were screened by morphological appraisal.Tetraploid of P.denticulata ssp.sinodenticulata was characterized by darker leaf color, thicker leaves,larger stoma and less stomatal numbers in unit area.Cytological identification and karyomorphological studies indicated that the number of metaphase chromosomes were formulated to be 2n= 2x= 4m+16sm+2st for P.denticulata ssp.sinodenticulata,tetraploids were formulated to be 2n = 4x= 8m + 32sm+ 4st, their karyotypes are all 3A.Tetraploids P.denticulata ssp.sinodenticulata were successfully induced.%以滇北球花报春(Primula denticulata ssp.sinodenticulata)为供试材料,在离体条件下,采用秋水仙素对其丛生芽进行诱导,比较不同浓度、不同处理时间秋水仙素诱导多倍体的效果.结果表明:以0.6%的秋水仙素处理72 h诱导效果最佳,诱导率达54%.经形态学观察发现,变异材料叶色变深,叶片质感变厚;气孔面积增大,单位面积气孔数目减少;染色体计数及核型分析显示,滇北球花报春的二倍体核型为2n=2x=4m+16sm+2st,四倍体核型为2n=4x=8m+32sm+4st,均属3A核型,并成功获得了滇北球花报春的四倍体植株.

  5. Genome-wide identification, classification, and expression analysis of sHSP genes in Chinese cabbage (Brassica rapa ssp pekinensis).

    Science.gov (United States)

    Tao, P; Guo, W L; Li, B Y; Wang, W H; Yue, Z C; Lei, J L; Zhong, X M

    2015-01-01

    Small heat shock proteins (sHSPs) are essential for the plant's normal development and stress responses, especially the heat stress response. The information regarding sHSP genes in Chinese cabbage (Brassica rapa ssp pekinensis) is sparse, hence we performed a genome-wide analysis to identify sHSP genes in this species. We identified 26 non-redundant sHSP genes distributed on all chromosomes, except chromosome A7, with one additional sHSP gene identified from an expressed sequence tag library. Chinese cabbage was found to contain more sHSP genes than Arabidopsis. The 27 sHSP genes were classified into 11 subfamilies. We identified 22 groups of sHSP syntenic orthologous genes between Chinese cabbage and Arabidopsis. In addition, eight groups of paralogous genes were uncovered in Chinese cabbage. Protein structures of the 27 Chinese cabbage sHSPs were modeled using Phyre2, which revealed that all of them contain several conserved β strands across different subfamilies. In general, gene structure was conserved within each subfamily between Chinese cabbage and Arabidopsis, except for peroxisome sHSP. Analysis of promoter motifs showed that most sHSP genes contain heat shock elements or variants. We also found that biased gene loss has occurred during the evolution of the sHSP subfamily in Chinese cabbage. Expression analysis indicated that the greatest transcript abundance of most Chinese cabbage sHSP genes was found in siliques and early cotyledon embryos. Thus, genome-wide identification and characterization of sHSP genes is a first and important step in the investigation of sHSPs in Chinese cabbage. PMID:26505345

  6. The evolutionary history and diagnostic utility of the CRISPR-Cas system within Salmonella enterica ssp. enterica

    Directory of Open Access Journals (Sweden)

    James B. Pettengill

    2014-04-01

    Full Text Available Evolutionary studies of clustered regularly interspaced short palindromic repeats (CRISPRs and their associated (cas genes can provide insights into host-pathogen co-evolutionary dynamics and the frequency at which different genomic events (e.g., horizontal vs. vertical transmission occur. Within this study, we used whole genome sequence (WGS data to determine the evolutionary history and genetic diversity of CRISPR loci and cas genes among a diverse set of 427 Salmonella enterica ssp. enterica isolates representing 64 different serovars. We also evaluated the performance of CRISPR loci for typing when compared to whole genome and multilocus sequence typing (MLST approaches. We found that there was high diversity in array length within both CRISPR1 (median = 22; min = 3; max = 79 and CRISPR2 (median = 27; min = 2; max = 221. There was also much diversity within serovars (e.g., arrays differed by as many as 50 repeat-spacer units among Salmonella ser. Senftenberg isolates. Interestingly, we found that there are two general cas gene profiles that do not track phylogenetic relationships, which suggests that non-vertical transmission events have occurred frequently throughout the evolutionary history of the sampled isolates. There is also considerable variation among the ranges of pairwise distances estimated within each cas gene, which may be indicative of the strength of natural selection acting on those genes. We developed a novel clustering approach based on CRISPR spacer content, but found that typing based on CRISPRs was less accurate than the MLST-based alternative; typing based on WGS data was the most accurate. Notwithstanding cost and accessibility, we anticipate that draft genome sequencing, due to its greater discriminatory power, will eventually become routine for traceback investigations.

  7. Ampelographic evaluation of wild grapevine characters VitisVinifera G. ssp Sylvestris in Vlora’s river valley

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    BARDHOSH FERRAJ

    2014-06-01

    Full Text Available The wild grapevine (Vitisvitifera G. ssp Sylvestris has been growing spontaneously for thousands of years in Vlora’s river valley. It has been growing in the forests and the villages located along this river, starting from the low hills and ending with villages, located at approximately 600 - 700 m above the sea level such as Mesaplik, Brataj, Tërbaç, Vranisht, Kuç, Sevaster, ect. Observing the flower’s characteristics we concluded that 13% of the flowers are hermaphrodites, 41% of the individuals have a functioning male flower and 46 % of the individuals have a functional female flower. The leaf has different dimensions starting from small to medium, it has 5 lobes, a pentagon form and a smaller petiole than the length of the grown leaf. Above the main venations there are no signs of anthocyanin pigmentation. The average length of the blade above the venation N2 is 10.1\\ 9.6=1.05. The grains contain 2-4 seeds with an average length of 4.85 mm and an average width of 4.5mm, the ratio length\\width of the seed is 4.5\\4.85 = 0.92. The pulp of the grain contains 44.5% must, 21% sugar and 13.1% acidity in total. In the forests and the villages of Vlora’s river valley, the wild grapevine is usually accompanied with other plants like, A.unedo L., C.siliquastrum L., C. mas L., E. arboreaL., I.aquifolium L., Q.cerris L., P.alba L., Q.frainetto Ten., P.spina-christi M., O. vulgare L., W. pear, J. oxycedrus L., W.plum, Blackberries, W. rose, etc, and some herbaceous plants that typically grow in this area such as: M.camomila, strawberry, trefoil, rosemary , lavender, B. perennis L., ect.

  8. Regulation of bolting and identification of the α-tubulin gene family in Brassica rapa L. ssp pekinensis.

    Science.gov (United States)

    Zhang, Y W; Jin, D; Xu, C; Zhang, L; Guo, M H; Fang, Z Y

    2016-01-01

    Microtubules are important components of eukaryotic cells, and they play vital roles in cell morphogenesis, carrying of signaling molecules, transport of materials, and establishing the cell polarity. During bolting of biennial plants, cell division and elongation are involved, and cell elongation inevitably involves the microtubules arrangement and expression of related genes. So we deduce that it is of great significance to figure out the mechanism of bolting and flowering in which TUA genes are involved. In the present study, bioinformatic methods were used to predict and identify the α-tubulin gene family (BrTUAs) in Brassica rapa L. ssp pekinensis (Chinese cabbage) through the alignment of AtTUA gene sequence from Arabidopsis thaliana with the B. rapa genome database (http://brassicadb.org/brad/) using the basic local alignment search tool. The change in the structure and functions of BrTUAs during the process of evolution, cis-acting elements in the promoter sequences of BrTUAs, and the expression of the identified genes was also analyzed. Twelve members of the α-tubulin gene family were identified from Chinese cabbage. The gene length, intron, exon, and promoter regions were determined to have changed significantly during the genome evolution. Only five of the 12 members were encoded completely and were observed to differ in their spatial and temporal expression. The five BrTUA promoter sequences contained different numbers of cis-elements responsive to light and low-temperature response, cis-elements responsive among which hormonal responses were significantly different. We also report that the BrTUAs were involved in the regulation of the bolting in Chinese cabbage, and propose that this process could be controlled by regulating the expression of BrTUAs. PMID:26909938

  9. Análisis de los compuestos volátiles de la ciruela amarilla (Prunus domestica L. ssp. domestica

    Directory of Open Access Journals (Sweden)

    Yineth Ruiz

    2011-06-01

    Full Text Available El aroma de las frutas se debe a los constituyentes volátiles presentes que, aunque se encuentran en muy bajas concentraciones, contribuyen al aroma global en grados muy diversos. Se hace necesario usar técnicas de aislamiento y concentración que garanticen el análisis de una composición química semejante a la de la fruta. Este trabajo tuvo como objetivo el análisis de los compuestos volátiles de la ciruela amarilla (Prunus domestica L. ssp.domestica por el método de evaporación del aroma asistida por solvente (SAFE. Este método utiliza un equipo de destilación conectado a una bomba de alto vacío que ofrece la posibilidad de aislar rápidamente compuestos volátiles sin daño térmico en diferentes matrices alimentarias. La separación e identificación de los compuestos volátiles se realizó por cromatografía de gases-espectrometría de masas (GC-MS. Se identificaron 47 compuestos (6,55 mg/kg de pulpa de fruta, entre ellos 14 alcoholes, 8 aldehídos, 7 ésteres, 5 cetonas, 4 ácidos carboxílicos, 4 hidrocarburos aromáticos, 3 lactonas, un compuesto azufrado y una hidroxicetona; 16 de ellos se informan por primera vez. El acetato de etilo (2,88 mg/kg, etanol (1 mg/kg y ácido octanoico (0,78 mg/kg fueron los constituyentes volátiles mayoritarios de esta variedad de ciruela.

  10. Polymorphisms in the gene encoding bovine interleukin-10 receptor alpha are associated with Mycobacterium avium ssp. paratuberculosis infection status

    Directory of Open Access Journals (Sweden)

    Kelton David F

    2010-04-01

    Full Text Available Abstract Background Johne's disease is a chronic inflammatory bowel disease (IBD of ruminants caused by Mycobacterium avium ssp. paratuberculosis (MAP. Since this pathogen has been implicated in the pathogenesis of human IBDs, the goal of this study was to assess whether single nucleotide polymorphism (SNPs in several well-known candidate genes for human IBD are associated with susceptibility to MAP infection in dairy cattle. Methods The bovine candidate genes, interleukin-10 (IL10, IL10 receptor alpha/beta (IL10RA/B, transforming growth factor beta 1 (TGFB1, TGFB receptor class I/II (TGFBR1/2, and natural resistance-associated macrophage protein 1 (SLC11A1 were sequenced for SNP discovery using pooled DNA samples, and the identified SNPs were genotyped in a case-control association study comprised of 242 MAP negative and 204 MAP positive Holstein dairy cattle. Logistic regression was used to determine the association of SNPs and reconstructed haplotypes with MAP infection status. Results A total of 13 SNPs were identified. Four SNPs in IL10RA (984G > A, 1098C > T, 1269T > C, and 1302A > G were tightly linked, and showed a strong additive and dominance relationship with MAP infection status. Haplotypes AGC and AAT, containing the SNPs IL10RA 633C > A, 984G > A and 1185C > T, were associated with an elevated and reduced likelihood of positive diagnosis by serum ELISA, respectively. Conclusions SNPs in IL10RA are associated with MAP infection status in dairy cattle. The functional significance of these SNPs warrants further investigation.

  11. Effects of biological and methodological factors on volatile organic compound patterns during cultural growth of Mycobacterium avium ssp. paratuberculosis.

    Science.gov (United States)

    Küntzel, Anne; Fischer, Sina; Bergmann, Andreas; Oertel, Peter; Steffens, Markus; Trefz, Phillip; Miekisch, Wolfram; Schubert, Jochen K; Reinhold, Petra; Köhler, Heike

    2016-01-01

    Mycobacterium avium ssp. paratuberculosis (MAP) causes chronic granulomatous enteritis in ruminants. Bacterial growth is still the diagnostic 'gold standard', but is very time consuming. MAP-specific volatile organic compounds (VOCs) above media could accelerate cultural diagnosis. The aim of this project was to assess the kinetics of a VOC profile linked to the growth of MAP in vitro. The following sources of variability were taken into account: five different culture media, three different MAP strains, inoculation with different bacterial counts, and different periods of incubation. Needle-trap microextraction was employed for pre-concentration of VOCs, and gas chromatography-mass spectrometry for subsequent analysis. All volatiles were identified and calibrated by analysing pure references at different concentration levels. More than 100 VOCs were measured in headspaces above MAP-inoculated and control slants. Results confirmed different VOC profiles above different culture media. Emissions could be assigned to either egg-containing media or synthetic ingredients. 43 VOCs were identified as potential biomarkers of MAP growth on Herrold's Egg Yolk Medium without significant differences between the tree MAP strains. Substances belonged to the classes of alcohols, aldehydes, esters, ketones, aliphatic and aromatic hydrocarbons. With increasing bacterial density the VOC concentrations above MAP expressed different patterns: the majority of substances increased (although a few decreased after reaching a peak), but nine VOCs clearly decreased. Data support the hypotheses that (i) bacteria emit different metabolites on different culture media; (ii) different MAP strains show uniform VOC patterns; and (iii) cultural diagnosis can be accelerated by taking specific VOC profiles into account. PMID:27604146

  12. Using small-scale studies to prioritize threats and guide recovery of a rare hemiparasitic plant: Cordylanthus rigidus ssp. littoralis.

    Directory of Open Access Journals (Sweden)

    Sean M Watts

    Full Text Available BACKGROUND: Recovering endangered species would benefit from identifying and ranking of the factors that threaten them. Simply managing for multiple positive influences will often aid in recovery; however, the relative impacts of multiple threats and/or interactions among them are not always predictable. We used a series of experiments and quantitative observational studies to examine the importance of five potential limiting factors to the abundance of a state-listed endangered hemiparasitic annual forb, Cordylanthus rigidus ssp. littoralis (C.r.l., California, USA: host availability, mammalian herbivores, insect seed predators, fire suppression, and exotic species. While this initial assessment is certainly not a complete list, these factors stem from direct observation and can inform provisional recommendations for management and further research. METHODOLOGY AND PRINCIPAL FINDINGS: Studies were conducted at five sites and included assessments of the influence of host availability, exotic species, exclusion of mammalian herbivores and insect seed predators on C.r.l. productivity, and simulated effects of fire on seed germination. C.r.l. was limited by multiple threats: individuals with access to host species produced up to three times more inflorescences than those lacking hosts, mammalian herbivory reduced C.r.l. size and fecundity by more than 50% and moth larvae reduced seed production by up to 40%. Litter deposition and competition from exotic plant species also appears to work in conjunction with other factors to limit C.r.l. throughout its life cycle. CONCLUSIONS AND SIGNIFICANCE: The work reported here highlights the contribution that a series of small-scale studies can make to conservation and restoration. Taken as a whole, the results can be used immediately to inform current management and species recovery strategies. Recovery of C.r.l. will require management that addresses competition with exotic plant species, herbivore pressure

  13. HLA-DRB, DQA and DQB allele frequencies in Iranian patients with chronic hepatitis B by PCR-SSP

    Directory of Open Access Journals (Sweden)

    Baniaghil S

    2007-05-01

    Full Text Available Background: The outcome of acute hepatitis B infection may be influenced by host genetic factors like human leukocyte antigen (HLA. To investigate the association between the HLA-DRB, DQA1 and DQB1 alleles and chronic hepatitis B infection, 50 patients with chronic hepatitis B (based on 6 months positive of HBsAg and HBc antibody and HBeAg and antibody by serological test, were selected from Turkman population in north east of Iran .Allele frequency in patients were compared with a 65 aged and sex match control group from healthy blood donor of that ethnic population. Methods: HLA DRB, DQA1 and DQB1 alleles were determined using polymerase chain reaction based on sequence specific primer (PCR-SSP method. Allele frequencies in patients and control subjects were compared by Epi-info statistical soft-wear. Results: There was a significant increase and positive association in HLA-DRB1*0301, DQA1*0501 and DQB1*0604 allele frequency in patients group while the frequency of HLA-DRB1*1301, 1501 and DQB1*0401 and DQA1*0401, 0102 were lower in patients than control group and shows negative association. Conclusion: In Iranian Torkman population, HLA DRB1*0301, DQA1*0501 and DQB1*0604 have an important role in susceptibility to chronic hepatitis B infection and HLA DRB1*1301, 1501, DQB1*0401 are associated with protection to chronic hepatitis B infection. Larger case control studies may be helpful to confirm our investigation.

  14. Growth and acid production of Lactobacillus delbrueckii ssp. bulgaricus ATCC 11842 in the fermentation of algal carcass.

    Science.gov (United States)

    Li, C; Zhang, G F; Mao, X; Wang, J Y; Duan, C Y; Wang, Z J; Liu, L B

    2016-06-01

    Algal carcass is a low-value byproduct of algae after its conversion to biodiesel. Dried algal carcass is rich in protein, carbohydrate, and multiple amino acids, and it is typically well suited for growth and acid production of lactic acid bacteria. In this study, Lactobacillus delbrueckii ssp. bulgaricus ATCC 11842 was used to ferment different algal carcass media (ACM), including 2% ACM, 2% ACM with 1.9% glucose (ACM-G), and 2% ACM with 1.9% glucose and 2g/L amino acid mixture (ACM-GA). Concentrations of organic acids (lactic acid and acetic acid), acetyl-CoA, and ATP were analyzed by HPLC, and activities of lactate dehydrogenase (LDH), acetokinase (ACK), pyruvate kinase (PK), and phosphofructokinase (PFK) were determined by using a chemical approach. The growth of L. bulgaricus cells in ACM-GA was close to that in the control medium (de Man, Rogosa, and Sharpe). Lactic acid and acetic acid contents were greatly reduced when L. bulgaricus cells were grown in ACM compared with the control medium. Acetyl-CoA content varied with organic acid content and was increased in cells grown in different ACM compared with the control medium. The ATP content of L. bulgaricus cells in ACM was reduced compared with that of cells grown in the control medium. Activities of PFK and ACK of L. bulgaricus cells grown in ACM were higher and those of PK and LDH were lower compared with the control. Thus, ACM rich in nutrients may serve as an excellent substrate for growth by lactic acid bacteria, and addition of appropriate amounts of glucose and amino acids can improve growth and acid production. PMID:26995135

  15. Plant phenolic acids affect the virulence of Pectobacterium aroidearum and P. carotovorum ssp. brasiliense via quorum sensing regulation.

    Science.gov (United States)

    Joshi, Janak Raj; Burdman, Saul; Lipsky, Alexander; Yariv, Shaked; Yedidia, Iris

    2016-05-01

    Several studies have reported effects of the plant phenolic acids cinnamic acid (CA) and salicylic acid (SA) on the virulence of soft rot enterobacteria. However, the mechanisms involved in these processes are not yet fully understood. Here, we investigated whether CA and SA interfere with the quorum sensing (QS) system of two Pectobacterium species, P. aroidearum and P. carotovorum ssp. brasiliense, which are known to produce N-acyl-homoserine lactone (AHL) QS signals. Our results clearly indicate that both phenolic compounds affect the QS machinery of the two species, consequently altering the expression of bacterial virulence factors. Although, in control treatments, the expression of QS-related genes increased over time, the exposure of bacteria to non-lethal concentrations of CA or SA inhibited the expression of QS genes, including expI, expR, PC1_1442 (luxR transcriptional regulator) and luxS (a component of the AI-2 system). Other virulence genes known to be regulated by the QS system, such as pecS, pel, peh and yheO, were also down-regulated relative to the control. In agreement with the low levels of expression of expI and expR, CA and SA also reduced the level of the AHL signal. The effects of CA and SA on AHL signalling were confirmed in compensation assays, in which exogenous application of N-(β-ketocaproyl)-l-homoserine lactone (eAHL) led to the recovery of the reduction in virulence caused by the two phenolic acids. Collectively, the results of gene expression studies, bioluminescence assays, virulence assays and compensation assays with eAHL clearly support a mechanism by which CA and SA interfere with Pectobacterium virulence via the QS machinery. PMID:26177258

  16. Comparative chloroplast genomics and phylogenetics of Fagopyrum esculentum ssp. ancestrale – A wild ancestor of cultivated buckwheat

    Directory of Open Access Journals (Sweden)

    Dhingra Amit

    2008-05-01

    Full Text Available Abstract Background Chloroplast genome sequences are extremely informative about species-interrelationships owing to its non-meiotic and often uniparental inheritance over generations. The subject of our study, Fagopyrum esculentum, is a member of the family Polygonaceae belonging to the order Caryophyllales. An uncertainty remains regarding the affinity of Caryophyllales and the asterids that could be due to undersampling of the taxa. With that background, having access to the complete chloroplast genome sequence for Fagopyrum becomes quite pertinent. Results We report the complete chloroplast genome sequence of a wild ancestor of cultivated buckwheat, Fagopyrum esculentum ssp. ancestrale. The sequence was rapidly determined using a previously described approach that utilized a PCR-based method and employed universal primers, designed on the scaffold of multiple sequence alignment of chloroplast genomes. The gene content and order in buckwheat chloroplast genome is similar to Spinacia oleracea. However, some unique structural differences exist: the presence of an intron in the rpl2 gene, a frameshift mutation in the rpl23 gene and extension of the inverted repeat region to include the ycf1 gene. Phylogenetic analysis of 61 protein-coding gene sequences from 44 complete plastid genomes provided strong support for the sister relationships of Caryophyllales (including Polygonaceae to asterids. Further, our analysis also provided support for Amborella as sister to all other angiosperms, but interestingly, in the bayesian phylogeny inference based on first two codon positions Amborella united with Nymphaeales. Conclusion Comparative genomics analyses revealed that the Fagopyrum chloroplast genome harbors the characteristic gene content and organization as has been described for several other chloroplast genomes. However, it has some unique structural features distinct from previously reported complete chloroplast genome sequences. Phylogenetic

  17. A novel vaccine against Porcine circovirus type 2 (PCV2) and Streptococcus equi ssp. zooepidemicus (SEZ) co-infection.

    Science.gov (United States)

    Lin, Hui-xing; Ma, Zhe; Yang, Xu-qiu; Fan, Hong-jie; Lu, Cheng-ping

    2014-06-25

    To develop a vaccine against Porcine circovirus type 2 (PCV2) and Streptococcus equi ssp. zooepidemicus (SEZ) co-infection, the genes of porcine IL-18, capsid protein (Cap) of PCV2 and M-like protein (SzP) of SEZ were inserted into the swinepox virus (SPV) genome by homologous recombination. The recombinant swinepox virus rSPV-ICS was verified by PCR and indirect immunofluorescence assays. To evaluate the immunogenicity of rSPV-ICS, 28 PCV2 and SEZ seronegative Bama minipigs were immunized with rSPV-ICS (n=8), commercial PCV2 vaccine and SEZ vaccine (n=8) or wild type SPV (n=8). The results showed that SzP-specific antibody and PCV2 neutralizing antibody of the rSPV-ICS immunized group increased significantly compared to the wild type SPV treated group after vaccination and increased continuously over time. The levels of IL-4 and IFN-γ in the rSPV-ICS immunized group were significantly higher than the other three groups, respectively. After been co-challenged with PCV2 and SEZ, 87.5% piglets in rSPV-ICS immunized group were survived. Significant reductions in gross lung lesion score, histopathological lung lesion score, and lymph node lesion score were noticed in the rSPV-ICS immunized group compared with the wtSPV treated group. The results suggested that the recombinant rSPV-ICS provided piglets with significant protection against PCV2-SEZ co-infection; thus, it offers proof-of-principle for the development of a vaccine for the prevention of these swine diseases. PMID:24726504

  18. FTIR microspectroscopy discriminates anticancer action on human leukemic cells by extracts of Pinus kesiya; Cratoxylum formosum ssp. pruniflorum and melphalan.

    Science.gov (United States)

    Machana, Sasipawan; Weerapreeyakul, Natthida; Barusrux, Sahapat; Thumanu, Kanjana; Tanthanuch, Waraporn

    2012-05-15

    Apoptosis is the principal molecular goal of chemotherapeutics for effective anticancer action. We studied the effect of 50% ethanolic-water extracts of Pinus kesiya, Cratoxylum formosum ssp. pruniflorum and melphalan on cytotoxicity and apoptosis induction for human leukemic U937 cells, and explored the mode of action using FTIR microspectroscopy. The number of viable U937 cells in vitro was decreased in a concentration-dependent manner by all tested compounds, although potency differed between the U937 and Vero cells. Melphalan and the extract of C. formosum exhibited relatively lower IC(50) values (15.0 ± 1.0 and 82.7 ± 3.2 μg/mL respectively) and higher selectivity (selective index>3) than the extract of P. kesiya (299.0 ± 5.2 μg/mL; selective index<3) on the U937 cells. All three compounds significantly induced apoptosis through the late stage - seen by the indicative DNA ladder - with the most effective being melphalan, then the P. kesiya and C. formosum extracts. FTIR microspectroscopy revealed that all three compounds raised the intensity of the β-pleated sheet - higher than that of the untreated U937 cells - corresponding to a shift in the α-helix band associated with an alteration in the secondary structure of the protein band, confirming induction of apoptosis via pro-apoptotic proteins. The differences in intensity of the FTIR bands associated with lipids, proteins and nucleic acids were responsible for discrimination of the anticancer mode of action of each of the three compounds. The FTIR data suggest that the two plant extracts possessed anticancer activity with a different mode of action than melphalan. PMID:22483925

  19. A survey of FLS2 genes from multiple citrus species identifies candidates for enhancing disease resistance to Xanthomonas citri ssp. citri.

    OpenAIRE

    Qingchun Shi; Febres, Vicente J.; Jones, Jeffrey B; MOORE, Gloria A.

    2016-01-01

    Pathogen-associated molecular patterns (PAMPs)-triggered immunity (PTI) is an important component of plant innate immunity. In a previous study, we showed that the PAMP flg22 from Xanthomonas citri ssp. citri (Xflg22), the causal agent of citrus canker, induced PTI in citrus, which correlated with the observed levels of canker resistance. Here, we identified and sequenced two bacterial flagellin/flg22 receptors (FLS2-1 and FLS2-2) from ‘Duncan’ grapefruit (Citrus paradisi, CpFLS2-1 and CpFLS2...

  20. The effects of seeds irradiation with 60Co γ-ray on seed germination and shoot growth of Brassica campetris L. ssp. Chinensis var. utilis

    International Nuclear Information System (INIS)

    Seeds of Brassica campetris L. ssp. Chinensis var. utilis pre-soaked with water for 1h were irradiated with 60Co γ-ray. Irradiation delayed the germination of seeds but did not affect the germination rate. The height, root length, fresh weight and survival rate of seedlings decreased with the increasing of irradiation dose. There were significant negative correlation between death rate and the height, root length and fresh weight. The dose of 200 - 300 Gy were recommended as suitable irradiation doses for pre-soaked seeds

  1. Nucleotide Sequence and Analysis of an orotate transporter-containing plasmid isolated from the Lactococcus lactis ssp. lactis biovar diacetylactis strain DB0410

    DEFF Research Database (Denmark)

    Defoor, Els Marie Celine; Martinussen, Jan

    A new lactococcal plasmid, pDBORO, was isolated from the Lactococcus lactis ssp. lactis biovar diacetylactis strain DB0410 responsible for the sensitivity of DB0410 towards the pyrimidine-analog 5´-fluoroorotate. The plasmid pDBORO amounts to 16404 bp and its complete nucleotide sequence has been...... molecular cloning, we identified the open reading frames on pDBORO necessary for the utilization of orotate as the sole pyrimidine source. Surprisingly, homologs are found on the Lactococcus lactis IL1403 and MG1363 chromosomes despite the fact that they are resistant towards fluoroorotate....

  2. Effects of Different Cadmium Levels on Active Oxygen Metabolism and H2O2-Scavenging System in Brassica campestris L.ssp.chinensis

    Institute of Scientific and Technical Information of China (English)

    SUN Guang-wen; ZHU Zhu-jun; FANG Xue-zhi

    2004-01-01

    The effects of different Cd (Cadmium) levels on generation of active oxygen speceies(AOS) and H2O2-scavenging system in the leaves of Brassica campestris L. ssp. chinensiswere studied. The results showed that O2 generation rate, and H2O2 content were enhancedand malondialdehyde (MDA) content increased with the increase of Cd concentrations inthe growth medium. The activities of ascorbate peroxidase (APX), dehydroascorbatereductase (DR) and glutathione reductase (GR) were promoted by the addition of Cd.Exposed to Cd also increased the contents of ascorbate (ASA) and glutathione (GSH) in theleaves.

  3. Role of nitrification inhibitor DMPP( 3,4-dimethylpyrazole phosphate) in NO3--N accumulation in greengrocery( Brassica campestris L. Ssp. Chinensis )and vegetable soil

    Institute of Scientific and Technical Information of China (English)

    XU Chao; WU Liang-huan; JU Xiao-tang; ZHANG Fu-suo

    2005-01-01

    The influence of nitrification inhibitor(NI) 3,4-dimethylpyrazole phosphate (DMPP) on nitrate accumulation in greengrocery( Brassica campestris L. ssp. chinensis) and vegetable soil at surface layer were investigated in field experiments in 2002 and 2003.Results showed that NI DMPP took no significant effect on yields of edible parts of greengrocery, but it could significantly decrease NO3- -N concentration in greengrccery and in vegetable soil at surface layer. In addition, NI DMPP could reduce the NO3--N concentration during the prophase stage of storage.

  4. Optimal control of SSP motor for marine electric propulsion based on IGA-ANFIS%船舶电力推进SSP电机应用IGA-ANFIS优化控制

    Institute of Scientific and Technical Information of China (English)

    张桂臣; 马捷

    2011-01-01

    In order to improve the control performance of Siemens-Schottel-propulsor (SSP) motor for the ship podded propulsion, the hybrid algorithm based on Immune genetic algorithm (IGA) and adaptive neuro -fuzzy inference system (ANFIS) was presented and applied to the optimal control of the SSP motor. The principle of the SSP propulsion system and its hybrid control model were analyzed in this paper, the hardware-in-the-loop simulation system of the SSP podded propulsion was designed and the IGA-AN-FIS hybrid control strategy was researched. Instead of being concluded by mathematics model, with the utilization of both the ANFIS used to produce dynamic model of SSP process response and the IGA optimizes hybrid controller coefficients by the SSP performance criteria (maximum overshoot and setting time). The IGA-ANFIS control strategy was experimentally investigated in the SSP simulation system and compared with the self tuning PI controller. The tested results show that the proposed control strategy has advantages of fewer parameters and more stability.%为了改善船舶吊舱推进西门子-肖特尔-推进器(SSP)电机的控制性能,提出基于免疫遗传算法( IGA)与自适应神经模糊推理系统(ANFIS)的复合算法并应用于SSP电机的优化控制.分析SSP推进系统的工作原理及其复合控制模型,设计基于Siemens Sinamics的SSP吊舱推进半实物模拟系统,研究IGA-ANFIS的复合控制策略.该控制系统不是基于数学模型,应用ANFIS逼近SSP过程响应的动态模型,IGA以SSP的性能指标(最大超调量和过渡过程时间)来优化复合控制系数.在SSP模拟系统上进行IGA-ANFIS复合控制算法的实验研究,并与SIEMENS自整定PI控制器进行了比较.结果表明:该控制策略具有所需系统参数少、稳定性好的优点.

  5. Comparison of HLA-B27 detection by flow cytometry and SSP-PCR and study on HLA-B27 subtypes%流式细胞术与 PCR-SSP 法检测 HLA-B27的比对及 HLA-B27亚型的研究

    Institute of Scientific and Technical Information of China (English)

    白世杰; 托娅; 张保平; 王丽娟; 王雅菲

    2016-01-01

    Objective To investigate the application of flow cytometry (FCM ) and sequence‐specific primer polymerase chain reaction (PCR‐SSP) method in the detection of human leukocyte antigen‐B27 (HLA‐B27) and to observe the distribution of HLA‐B27 subtypes in the local region .Methods The HLA‐B27 level in 88 cases of sus‐pected ankylosing spondylitis (AS) was detected by FCM and PCR‐SSP .Results Among 88 cases of suspected AS , 82 cases were HLA‐B27 positive and 6 cases were HLA‐B27 negative by FCM ,the positive rate was 93 .2% ;whereas 83 cases were HLA‐B27 positive and 5 cases were HLA‐B27 negative by PCR‐SSP ,the positive rate was 94 .3% .In the subtyping results ,41 cases were B * 2705 genotype ,accounting for 49 .4% ,37 cases were B * 2704 genotype ,ac‐counting for 44 .5% ,1 case was B * 2702 genotype ,accounting for 1 .2% ,4 cases were positive without distinguished genotype .Conclusion The Kappa consistency coefficient is 0 .905 ,the detection results of HLA‐B27 by PCR‐SSP and FCM have higher consistency .The susceptible HLA‐B27 allele subtypes are mainly HLA‐B * 2704 and HLA‐B *2705 .%目的:探讨流式细胞术(FCM )与序列特异性引物聚合酶链式反应(PCR‐SSP)在人类白细胞表面抗原‐B27(HLA‐B27)检测中的应用,并观察 HLA‐B27亚型在本地区的分布情况。方法采用 PCR‐SSP 和 FCM 检测88例疑似强直性脊柱炎(AS)患者 HLA‐B27。结果88例 AS 疑似患者中 FCM 法检测 HLA‐B27结果阳性82例,阴性6例,阳性率为93.2%;PCR‐SSP 法检测阳性83例、阴性5例、阳性率为94.3%。分型结果 B 倡2705型41例占49.4%;B 倡2704型37例占44.5%;B 倡2702型1例占1.2%;阳性但未分辨型别4例。结论 Kappa 一致性系数 K =0.905,PCR‐SSP 法与 FCM 检测 HLA‐B27结果具有较高的一致性。本地区易感 HLA‐B27等位基因亚型主要以 HLA‐B 倡2704和 HLA‐B 倡2705为主。

  6. Effect of the Antisense BcMF12 Driven by the BcA9 Promoter on Gene Silencing in Brassica campestris L. ssp. chinensis

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    The study analyzed the silencing of BcMF12 gene regulated by BcA9 promoter in the transgenic pakchoi and confirmed the effect of antisense BcMF12 gene on the pollen development. A conserved BcMF12 gene fragment was amplified from the cDNA of flower buds in pakchoi (Brassica campestris L. ssp. chinensis, syn. B. rapa L. ssp. chinensis) and was fused to the anther specific BcA9 promoter. The plant antisense expression vector was constructed and then introduced into pakchoi via Agrobacterium-mediated transformation. The transgenic plants were screened by antibiotics and molecular analysis. PCR and Southern blot revealed that the antisense BcMF12-GUS fusion gene regulated by BcA9 promoter was integrated into transgenic plants. Northern blot suggested that the expression of BcMF12 gene was down-regulated significantly. The pollen germination rate of transgenic plants with antisense BcMF12 gene decreased as compared with that of the control plants. The expression of the gene BcMF12 related to the pollen development was inhibited by the antisense BcMF12 driven by BcA9 promoter, which consequently affected the pollen development in pakchoi.

  7. Proyecto de forestación con carrasca (Quercus ilex ssp. Rotundifolia) micorrizada con trufa negra (Tuber melanosporum Vitt.) en el término municipal de San Agustín

    OpenAIRE

    MAYO SANZ, ELOY

    2012-01-01

    Mayo Sanz, E. (2011). Proyecto de forestación con carrasca (Quercus ilex ssp. Rotundifolia) micorrizada con trufa negra (Tuber melanosporum Vitt.) en el término municipal de San Agustín. http://hdl.handle.net/10251/14231.

  8. The effect of SSP used in the nursing skills training%SSP在护理技能实训中的应用效果

    Institute of Scientific and Technical Information of China (English)

    蔡妤珂; 周丽君

    2015-01-01

    目的:探讨在护理技能实训课程中应用SSP对高职护生评判性思维及沟通能力的影响。方法选取2009级两个班级分为实验组和对照组,实验组应用SSP进行护理技能实训,对照组按常规示教-练习模式进行护理技能实训,课程结束后采用评判性思维倾向问卷( CTDI-CV)及沟通能力测试问卷调查。结果实验组护生在评判性思维倾向总分和寻找真相、分析能力、系统化能力、认知成熟度方面的平均分及沟通能力评分上均高于对照组,差异有统计学意义( P<0.05)。结论 SSP可以提高高职护生的评判性思维能力和沟通能力。%Objective To investigate the effects of SSP in the nursing skills training courses to vocational nurs-ing students about critical thinking and communication skills. Methods Two classes were divided into experimental group and control group, experimental group selected SSP care skills training, and the control group were taught by con-ventional show - practice model of nursing skills training. After the end of the course, students were investigated using critical thinking questionnaire ( CTDI-CV) and the communication skills test questionnaire. Results The total score of critical thinking and the average score of finding out the truth, analytical ability, systematic ability and cognitive maturi-ty, and scores of communication skills were higher in the experimental group, there were statistically significant differ-ences between experimental group and control group ( P<0. 05 , P<0. 01 ) . Conclusions SSP can improve critical thinking skills and communication skills for vocational nursing students.

  9. Serotipos de Campylobacter jejuni ssp. jejuni aislado en carne de ave para consumo humano y en muestras de heces de niños con diarrea Campylobacter jejuni ssp. jejuni serotypes in avian meat for human consumption and in faecal samples of children with diarrhoea

    Directory of Open Access Journals (Sweden)

    H. Fernández

    2005-01-01

    Full Text Available Considerando a las aves de consumo como un importante reservorio de C. jejuni ssp jejuni y sus subproductos alimenticios como principal vehículo, fueron serotipificadas 50 cepas aisladas de carne de ave para consumo humano, correlacionándolas epidemiológicamente con los serotipos encontrados en 50 cepas aisladas de niños con diarrea. Las cepas de C.jejuni ssp jejuni fueron serotipificadas mediante la técnica de hemaglutinación pasiva descrita por Penner, utilizando un kit comercial (DENKA SEIKEN, conteniendo los 25 sueros tipificadores para los serotipos descritos como los más frecuentes. Los serotipos A, B, F, L, N e Y fueron aislados concomitantemente en ambos tipos de muestras. Los serotipos de mayor aislamiento en las muestras de origen humano fueron Z2 (16% y Z5 (12%, mientras que en las de origen aviar fueron los serotipos A (28%, C (10%, L (10% e Y (10%. Al no coexistir los serotipos Z y C, en ambos grupos muestrales, es posible inferir la existencia de otros reservorios y vehículos que estén actuando como agentes transmisores de esta bacteria al ser humano.Having in mind that fowl and avian byproducts for human consumption are important reservoirs and vehicles for C. jejuni ssp. jejuni, a serotyping study was conducted in 50 strains isolated from avian meat and 50 isolated from human diarrhoeic stools. C. jejuni ssp. jejuni serotyping was carried out using a commercial kit with 25 antisera (DENKA SEIKEN, based on the Penner’s passive haemagglutination technique. Serotypes A, B, F, L, N e Y were concomitantly found in both kinds of samples. Serotypes Z2 (16% and Z5 (12% were the most frequently found in human strains, whereas serotypes A (28%, C (10%, L (10% and Y (10% were the most frequently isolated from avian samples. However, serotypes Z and C did not coexist in both types of samples. The latter results suggest that additionally to fowl and avian meat, there might be other animal reservoirs and vehicles that could act as

  10. The effect of calcium ions on adhesion and competitive exclusion of Lactobacillus ssp. and E. coli O138

    DEFF Research Database (Denmark)

    Larsen, Nadja; Nissen, Peter; Willats, William G.T.

    2007-01-01

    The adhesion abilities of 11 strains of Lactobacillus were determined in vitro using the IPEC-J2 cell line as a model system. Bacteria cultures included the probiotic strains L. rhamnosus GG, L. reuteri ATCC 55730, L. johnsonii NCC 533 and L. reuteri DSM 12246, and new isolates of Lactobacillus ssp....... Adhesion was quantified by scintillation counting of radiolabelled bound bacteria. The highest adhesion of 38%, was determined for L. reuteri DSM 12246 followed by L. plantarum Q47 with an adhesion level of 24%. Other strains showed moderate to low binding of less than 16%. Competitive adhesion experiments...... on IPEC-J2 cells demonstrated that strongly adhesive strains, as L. reuteri DSM 12246 and L. plantarum Q47, significantly reduced the attachment of the less adhesive strains, such as L. rhamnosus GG and L. johnsonii NCC 533, both under condition of co-incubation and in displacement assays, indicating...

  11. Organogenesis from in vitro-derived leaf and internode explants of Hoya wightii ssp. palniensis -a vulnerable species of Western Ghats

    Directory of Open Access Journals (Sweden)

    Subbaiah Revathi Lakshmi

    2013-06-01

    Full Text Available An efficient system was developed for indirect plant regeneration from in vitro-derived leaf and internode explants of Hoya wightii ssp. palniensis. Maximum percentage of the organogenic callus was obtained on MS medium supplemented with NAA (1.0 mg/l and 2,4-D (2.0 mg/l. The best shoot bud induction was observed on MS medium with BA (1.0 mg/l +IBA (0.5 mg/l. The coconut water (15% was better, resulting in a differentiation of the shoot initials in to well-developed shoots. The elongated shoots (› 3cm long were rooted on a full strength MS basal medium, supplemented with 0.2 mg/l of IBA. Finally, the rooted plants were transferred to the soil with 80% success rate. This protocol was utilized for the in vitro propagation of this endangered plant species.

  12. Effects of Nitrogen Fertilizer with Nitrification Inhibitor DMPP (3,4-Dimethylpyrazole phosphate) on Nitrate Accumulation and Quality of Cabbage (Brassica campastris L.ssp.pekinesis)

    Institute of Scientific and Technical Information of China (English)

    XU Chao; WU Liang-huan; JU Xiao-tang; ZHANG Fu-suo

    2004-01-01

    To assess the effects of N fertilizer ammonium sulphate nitrate [(NH4)2SO4 plus NH4NO3;ASN] with the new nitrification inhibitor (NI) 3, 4-dimethylpyrazole phosphate (DMPP)(ASN+DMPP) on yield, nitrate accumulation, and quality of cabbage (Brassica campastrisL. ssp. pekinesis), two field trials were carried out under various soil-climatic conditions in Jinhua City and Xinchang County, Zhejiang Province of China in 2002.Results showed that DMPP could increase the mean yield by + 2.0 t ha-1 in Jinhua, +5.5 t ha-1 in Xinchang, decrease NO3--N content by -9.4% in Jinhua, -7.3% in Xinchang and improve nutritional quality by increasing vitamin C (VC), soluble sugar, K, Fe, Zn contents significantly.

  13. X-ray peak broadening analysis of Fe50Ni50 nanocrystalline alloys prepared under different milling times and BPR using size strain plot (SSP) method

    Indian Academy of Sciences (India)

    L Hosseinzadeh; J Baedi; A Khorsand Zak

    2014-08-01

    Fe50Ni50 nanocrystalline alloys were prepared by mechanical alloying method at different milling times of 2, 5, 10, 30, 50 and 70 h and ball powder ratios (BPR) of 10 : 1, 20 : 1 and 30 : 1. The structures of prepared powders were studied by X-ray diffraction (XRD). The broadening of the diffraction peaks were analysed using size strain plot (SSP) method and the lattice strain and crystallite size of the nanocrystals were calculated. In addition, the typical morphological studies were performed by scanning electron and transmission electron microscopies (SEM and TEM). The results showed that the crystallite size of the nanocrystals decreased with the milling time and BPR increases; whereas, the lattice constant () increased. Vibrating sample magnetometer (VSM) study of the powder prepared at 50 h and BPR 30 : 1 showed that the sample exhibits both the superparamagnetic and ferromagnetic properties in nanocrystallite size range.

  14. Monosomic Addition Lines of Flowering Chinese Cabbage (B. campestris L. ssp. chinensis var. parachinensis L. H. Bailey)-Chinese Kale (B. oleracea L. var. alboglabra L. H. Bailey)

    Institute of Scientific and Technical Information of China (English)

    WANG Xi-ne; ZHANG Cheng-he; XUAN Shu-xin; MAN Hong; LIU Hai-he; SHEN Shu-xing

    2008-01-01

    Interspecific alien addition lines have played significant roles in gene mapping, intergenomic gene transfer and chromosomal homoeological identification between closely related species. Selection of alien addition lines was conducted by karyotype analysis and morphological observation with the reference of parents. Triploid interspecies hybrid (AAC, 2n=3x=29) was obtained from Brassica campestris ssp. chinensis var. parachinensis Qinglu 9601 (tetraploid, AAAA, 2n=4x=40)×B. oleracea vat. alboglabra Baihua 9705 (diploid, CC, 2n=2x=18) by immature hybrid embryo culture in vitro. Five different alien monosomic addition lines (AA+C2, AA+C3, AA+C4, AA+C6, AA+C7) were obtained from the backcross progenies of AAC×AA. Each alien monosomic addition line has some specific morphological characters. It is feasible to obtain alien addition lines from the progenies of AAC×AA by karyotype analysis and morphological observation based on the reference of parents.

  15. Investigation of an outbreak of human salmonellosis caused by Salmonella enterica ssp enterica serovar Infantis by use of pulsed field gel electrophoresis

    DEFF Research Database (Denmark)

    Wegener, Henrik Caspar; Baggesen, Dorte Lau

    Analysis of chromosomal DNA restriction patterns produced by pulsed field gel electrophoresis (PFGE) was used to investigate an outbreak of human salmonellosis caused by Salmonella enterica ssp. enterica serovar Infantis (S. Infantis) involving more than 500 registered human cases. The outbreak had...... been tentatively traced back to a single pig slaughterhouse. A total of 135 isolates from various sources produced 21 different PFGE patterns with the restriction endonuclease XbaI. All human isolates from the outbreak belonged to a single type, the 'EPI-type', whereas human isolates recovered before...... and after the outbreak belonged to several different types. All isolates investigated from the suspect pig slaughterhouse and its supplier pig herds belonged to the EPI-type. Isolates from pork from the central meat market in Copenhagen, which received most of the carcasses from the suspect...

  16. Antiphytoviral Activity of Satureja montana L. ssp. variegata (Host P. W. Ball Essential Oil and Phenol Compounds on CMV and TMV

    Directory of Open Access Journals (Sweden)

    Dubravka Cukrov

    2010-09-01

    Full Text Available The essential oil of Satureja montana L. ssp. variegata (Host P. W. Ball (Lamiaceae was characterized by a high concentration of oxygenated monoterpenes (71.3%, among which carvacrol (19.4% and thymol (16.6% were the major compounds. When the essential oil was applied on local hosts Chenopodium amaranticolor Coste & Reyn. and Chenopodium quinoa Willd. simultaneously with the infecting virus, the number of local lesions on both Tobacco mosaic virus (TMV and Cucumber mosaic virus (CMV infected plants was reduced for 29.2% and 24.1%, respectively. When applied individually for each virus, thymol was more effective in reducing CMV infection (33.2%, while carvacrol was more effective in reducing the TMV infection (34.3%. No synergistic effect of both monoterpenes was observed in the antiviral activity of the oil.

  17. Chemical Composition, Nutritive and Energetic Value of Plantain (Musa ssp. Hybrids CRBP 14, CRBP 39, FHIA 17, FHIA 21and Orishele Variety

    Directory of Open Access Journals (Sweden)

    Coulibaly, S.

    2007-01-01

    Full Text Available Chemical characteristics as well as contents in main components such as dry matter, sugars, lipids proteins and some minerals were determined in four banana hybrids CRBP 14, CRBP 39, FHIA 17, FHIA 21 and Orishele variety (used as control. Titrable acidity, pH, and calorific energy of these various cultivars of banana (Musa ssp. were also determined. The results indicated that Orishele variety had the highest content of dry matter, total carbohydrate and potassium. On the other hand, CRBP 39 hybrid which had the highest total acidity was the richest in total sugars and was the most energetic. Concerning FHIA 17, it contained the highest amount of proteins, lipids, magnesium, calcium and iron.

  18. Anadolu karaçamı [Pinus nigra ssp. nigra Arn. var. caramanica (Loudon) Rehder] meşcerelerinde uygulanan ilk aralamaların ekofizyolojik etkileri

    OpenAIRE

    GENÇ, Musa; ÖZKAN, Kürşad; Özçelik, Ramazan; Güner, Teoman Şükrü; Serkan GÜLSOY; Deligöz, Ayşe

    2012-01-01

    Bu çalışma, Anadolu karaçamı (Pinus nigra ssp. nigra Arn. var. caramanica (Loudon) Rehder) meşceresinde uygulanan ilk aralamaların şiddetinin yakın dönem ekofizyolojik etkilerini incelemek ve uygun aralama derecesini belirlemek amacıyla yapılmıştır. Aralama işlemleri, doğal yolla gençleştirilmiş 36-40 yaşlarındaki Anadolu karaçamı meşcerelerinde dört farklı aralama yoğunluğunda (Kontrol, zayıf alçak aralama, mutedil alçak aralama ve kuvvetli alçak aralama) üç tekrarlı olarak uygulanmıştır. An...

  19. Whole genome sequences of three Treponema pallidum ssp. pertenue strains: yaws and syphilis treponemes differ in less than 0.2% of the genome sequence.

    Directory of Open Access Journals (Sweden)

    Darina Cejková

    2012-01-01

    Full Text Available BACKGROUND: The yaws treponemes, Treponema pallidum ssp. pertenue (TPE strains, are closely related to syphilis causing strains of Treponema pallidum ssp. pallidum (TPA. Both yaws and syphilis are distinguished on the basis of epidemiological characteristics, clinical symptoms, and several genetic signatures of the corresponding causative agents. METHODOLOGY/PRINCIPAL FINDINGS: To precisely define genetic differences between TPA and TPE, high-quality whole genome sequences of three TPE strains (Samoa D, CDC-2, Gauthier were determined using next-generation sequencing techniques. TPE genome sequences were compared to four genomes of TPA strains (Nichols, DAL-1, SS14, Chicago. The genome structure was identical in all three TPE strains with similar length ranging between 1,139,330 bp and 1,139,744 bp. No major genome rearrangements were found when compared to the four TPA genomes. The whole genome nucleotide divergence (d(A between TPA and TPE subspecies was 4.7 and 4.8 times higher than the observed nucleotide diversity (π among TPA and TPE strains, respectively, corresponding to 99.8% identity between TPA and TPE genomes. A set of 97 (9.9% TPE genes encoded proteins containing two or more amino acid replacements or other major sequence changes. The TPE divergent genes were mostly from the group encoding potential virulence factors and genes encoding proteins with unknown function. CONCLUSIONS/SIGNIFICANCE: Hypothetical genes, with genetic differences, consistently found between TPE and TPA strains are candidates for syphilitic treponemes virulence factors. Seventeen TPE genes were predicted under positive selection, and eleven of them coded either for predicted exported proteins or membrane proteins suggesting their possible association with the cell surface. Sequence changes between TPE and TPA strains and changes specific to individual strains represent suitable targets for subspecies- and strain-specific molecular diagnostics.

  20. Characterization of a novel gene, BcMF7, that is expressed preferentially in pollen of Brassica campestris L. ssp. Chinensis Makino

    Institute of Scientific and Technical Information of China (English)

    HUANG Li; CAO JiaShu; ZHANG YuChao; YE YiQun

    2007-01-01

    Pollen formation is important for plant sexual reproduction, To identify the genes that are involved in pollen formation, we performed the genome-wide transcriptional profiling in the flower buds of both male meiotic cytokinesis (mmc) mutant and its wild-type plants of Brassica campestris L. ssp. chinensis, syn. B. rapa L. ssp. chinensis, cDNA-amplified fragment length polymorphism (cDNA-AFLP) analysis showed that the mmc mutation resulted in changes in expression of a variety of genes. BcMF7, a transcript-derived fragment (TDF) accumulated in the wild-type flower buds was further characterized.The BcMF7 gene has 1161 bp in length with two introns. The full-length BcMF7 cDNA has 609 bp in length and encodes a protein of 129 amino acids. The deduced amino acid sequence of BcMF7 protein shares no similarity to any function-known protein in Swiss-Prot database, but has 8 protein kinase C phosphorylation sites, 2 casein kinase Ⅱ phosphorylation sites, 2 tyrosine kinase phosphorylation sites,2 N-glycosylation sites and 2 N-myristoylation sites. Spatial and temporal expression patterns analysis showed that BcMF7 was expressed exclusively in pollen. The expression signal of BcMF7 was first detected at the tetrad stage of microspore development, reached a peak level at the uninucleate stage,and decreased to a slightly low level at the mature pollen stage. All these results show that BcMF7 may play a certain role in the signal transduction during pollen development.

  1. Characterization of a novel gene, BcMF7,that is expressed preferentially in pollen of Brassica campestris L.ssp. chinensis Makino

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    Pollen formation is important for plant sexual reproduction. To identify the genes that are involved in pollen formation, we performed the genome-wide transcriptional profiling in the flower buds of both male meiotic cytokinesis (mmc) mutant and its wild-type plants of Brassica campestris L. ssp. chinen-sis, syn. B. rapa L. ssp. chinensis. cDNA-amplified fragment length polymorphism (cDNA-AFLP) analy-sis showed that the mmc mutation resulted in changes in expression of a variety of genes. BcMF7, a transcript-derived fragment (TDF) accumulated in the wild-type flower buds was further characterized. The BcMF7 gene has 1161 bp in length with two introns. The full-length BcMF7 cDNA has 609 bp in length and encodes a protein of 129 amino acids. The deduced amino acid sequence of BcMF7 protein shares no similarity to any function-known protein in Swiss-Prot database, but has 8 protein kinase C phosphorylation sites, 2 casein kinase II phosphorylation sites, 2 tyrosine kinase phosphorylation sites, 2 N-glycosylation sites and 2 N-myristoylation sites. Spatial and temporal expression patterns analysis showed that BcMF7 was expressed exclusively in pollen. The expression signal of BcMF7 was first detected at the tetrad stage of microspore development, reached a peak level at the uninucleate stage, and decreased to a slightly low level at the mature pollen stage. All these results show that BcMF7 may play a certain role in the signal transduction during pollen development.

  2. Targeted sequence capture provides insight into genome structure and genetics of male sterility in a gynodioecious diploid strawberry, Fragaria vesca ssp. bracteata (Rosaceae).

    Science.gov (United States)

    Tennessen, Jacob A; Govindarajulu, Rajanikanth; Liston, Aaron; Ashman, Tia-Lynn

    2013-08-01

    Gynodioecy is a sexual system wherein females coexist with hermaphrodites. It is of interest not only because male-sterile plants are advantageous in plant breeding but also because it can be a crucial step in the evolutionary transition to entirely separate sexes (dioecy) from a hermaphroditic ancestor. The gynodioecious diploid wild strawberry, Fragaria vesca ssp. bracteata (Rosaceae), is a member of a clade with both dioecious and cultivated species, making it an ideal model in which to study the genetics of male sterility. To create a genetic map of F. v. ssp. bracteata, we identified informative polymorphisms from genomic sequencing (3-5x coverage) of two outbred plants from the same population. Using targeted enrichment, we sequenced 200 bp surrounding each of 6575 polymorphisms in 48 F1 offspring, yielding genotypes at 98% of targeted sites with mean coverage >100x, plus more than 600-kb high-coverage nontargeted sequence. With the resulting linkage map of 7802 stringently filtered markers (5417 targeted), we assessed recombination rates and genomic incongruities. Consistent with past work in strawberries, male sterility is dominant, segregates 1:1, and maps to a single location in the female. Further mapping an additional 55 offspring places male sterility in a gene-dense, 338-kb region of chromosome 4. The region is not syntenic with the sex-determining regions in the closely related octoploids, F. chiloensis and F. virginiana, suggesting either independent origins or translocation. The 57 genes in this region do not include protein families known to control male sterility and thus suggest alternate mechanisms for the suppression of male function. PMID:23749450

  3. Effects of fractionated colostrum replacer and vitamins A, D, and E on haptoglobin and clinical health in neonatal Holstein calves challenged with Mycobacterium avium ssp. paratuberculosis.

    Science.gov (United States)

    Krueger, L A; Reinhardt, T A; Beitz, D C; Stuart, R L; Stabel, J R

    2016-04-01

    Thirty Holstein calves were obtained from 2 dairy farms in central Iowa at birth and randomly assigned to 1 of 6 treatment groups: (1) colostrum deprived (CD), no vitamins; (2) colostrum replacer (CR), no vitamins; (3) CR, vitamin A; (4) CR, vitamin D3; (5) CR, vitamin E; and (6) CR, vitamins A, D3, E, with 5 calves per treatment in a 14-d study. Calves were fed pasteurized whole milk (CD) or fractionated colostrum replacer (CR) at birth (d 0) and injected with vitamins according to treatment group. From d 1 through d 14 of the study, all calves were fed pasteurized whole milk (PWM) supplemented with vitamins as assigned. All calves were inoculated with Mycobacterium avium ssp. paratuberculosis on d 1 and 3 of age. Calves fed CR acquired IgG1 and haptoglobin in serum within 24 h of birth, whereas CD calves did not. The CR-fed calves were 2.5 times less likely to develop scours, and CR calves supplemented with vitamins D3 and E also demonstrated a decreased incidence of scours. Serum vitamin levels of A, D, and E increased within treatment group by d 7 and 14 of the study. Interestingly, synergistic effects of supplemental vitamins A, D3, and E on serum 25-(OH)-vitamin D were observed at d 7, resulting in higher levels than in calves administered vitamin D only. Further, vitamin D3 deficiency was observed in CD and CR calves fed a basal diet of pasteurized whole milk and no supplemental vitamins. Colonization of tissues with Mycobacterium avium ssp. paratuberculosis was negligible and was not affected by colostrum feeding or vitamin supplementation. Results demonstrated passive transfer of haptoglobin to neonatal calves, and potential health benefits of supplemental vitamins D3 and E to calves fed pasteurized whole milk. PMID:26805975

  4. Whole Genome Sequences of Three Treponema pallidum ssp. pertenue Strains: Yaws and Syphilis Treponemes Differ in Less than 0.2% of the Genome Sequence

    Science.gov (United States)

    Chen, Lei; Pospíšilová, Petra; Strouhal, Michal; Qin, Xiang; Mikalová, Lenka; Norris, Steven J.; Muzny, Donna M.; Gibbs, Richard A.; Fulton, Lucinda L.; Sodergren, Erica; Weinstock, George M.; Šmajs, David

    2012-01-01

    Background The yaws treponemes, Treponema pallidum ssp. pertenue (TPE) strains, are closely related to syphilis causing strains of Treponema pallidum ssp. pallidum (TPA). Both yaws and syphilis are distinguished on the basis of epidemiological characteristics, clinical symptoms, and several genetic signatures of the corresponding causative agents. Methodology/Principal Findings To precisely define genetic differences between TPA and TPE, high-quality whole genome sequences of three TPE strains (Samoa D, CDC-2, Gauthier) were determined using next-generation sequencing techniques. TPE genome sequences were compared to four genomes of TPA strains (Nichols, DAL-1, SS14, Chicago). The genome structure was identical in all three TPE strains with similar length ranging between 1,139,330 bp and 1,139,744 bp. No major genome rearrangements were found when compared to the four TPA genomes. The whole genome nucleotide divergence (dA) between TPA and TPE subspecies was 4.7 and 4.8 times higher than the observed nucleotide diversity (π) among TPA and TPE strains, respectively, corresponding to 99.8% identity between TPA and TPE genomes. A set of 97 (9.9%) TPE genes encoded proteins containing two or more amino acid replacements or other major sequence changes. The TPE divergent genes were mostly from the group encoding potential virulence factors and genes encoding proteins with unknown function. Conclusions/Significance Hypothetical genes, with genetic differences, consistently found between TPE and TPA strains are candidates for syphilitic treponemes virulence factors. Seventeen TPE genes were predicted under positive selection, and eleven of them coded either for predicted exported proteins or membrane proteins suggesting their possible association with the cell surface. Sequence changes between TPE and TPA strains and changes specific to individual strains represent suitable targets for subspecies- and strain-specific molecular diagnostics. PMID:22292095

  5. Space Shuttle Program (SSP) Orbiter Main Propulsion System (MPS) Gaseous Hydrogen (GH2) Flow Control Valve (FCV) Poppet Eddy Current (EC) Inspection Probability of Detection (POD) Study. Volume 2; Appendices

    Science.gov (United States)

    Piascik, Robert S.; Prosser, William H.

    2011-01-01

    The Director of the NASA Engineering and Safety Center (NESC), requested an independent assessment of the anomalous gaseous hydrogen (GH2) flow incident on the Space Shuttle Program (SSP) Orbiter Vehicle (OV)-105 during the Space Transportation System (STS)-126 mission. The main propulsion system (MPS) engine #2 GH2 flow control valve (FCV) LV-57 transition from low towards high flow position without being commanded. Post-flight examination revealed that the FCV LV-57 poppet had experienced a fatigue failure that liberated a section of the poppet flange. The NESC assessment provided a peer review of the computational fluid dynamics (CFD), stress analysis, and impact testing. A probability of detection (POD) study was requested by the SSP Orbiter Project for the eddy current (EC) nondestructive evaluation (NDE) techniques that were developed to inspect the flight FCV poppets. This report contains the Appendices to the main report.

  6. Space Shuttle Program (SSP) Orbiter Main Propulsion System (MPS) Gaseous Hydrogen (GH2) Flow Control Valve (FCV) Poppet Eddy Current (EC) Inspection Probability of Detection (POD) Study. Volume 1

    Science.gov (United States)

    Piascik, Robert S.; Prosser, William H.

    2011-01-01

    The Director of the NASA Engineering and Safety Center (NESC), requested an independent assessment of the anomalous gaseous hydrogen (GH2) flow incident on the Space Shuttle Program (SSP) Orbiter Vehicle (OV)-105 during the Space Transportation System (STS)-126 mission. The main propulsion system (MPS) engine #2 GH2 flow control valve (FCV) LV-57 transition from low towards high flow position without being commanded. Post-flight examination revealed that the FCV LV-57 poppet had experienced a fatigue failure that liberated a section of the poppet flange. The NESC assessment provided a peer review of the computational fluid dynamics (CFD), stress analysis, and impact testing. A probability of detection (POD) study was requested by the SSP Orbiter Project for the eddy current (EC) nondestructive evaluation (NDE) techniques that were developed to inspect the flight FCV poppets. This report contains the findings and recommendations from the NESC assessment.

  7. Laboratory and simulated field evaluation of a new recombinant of Bacillus thuringiensis ssp. israelensis and Bacillus sphaericus against Culex mosquito larvae (Diptera: Culicidae).

    Science.gov (United States)

    Zahiri, Nayer S; Federici, Brian A; Mulla, Mir S

    2004-05-01

    In the laboratory, three microbial mosquito larvicidal products consisting of Bacillus thuringiensis ssp. israelensis de Barjac (Bti), Bacillus sphaericus (Neide) (Bsph) (strain 2362), and the University of California Riverside (UCR) recombinant (producing toxins of both Bacillus sphaericus and Bacillus thuringiensis ssp. israelensis) were bioassayed against larvae of Culex quinequefasciatus Say (susceptible and resistant to Bsph 2362), and Aedes aegypti (L.). Bti proved highly effective against Cx. Quinequefasciatus susceptible and resistant strains, with LC50 values of 0.009 and 0.011 ppm and LC90 values of 0.057 and 0.026 ppm for Bsph-susceptible and -resistant strains, respectively. Bti was also highly active against Ae. eagypti with LC50 and LC90 values of 0.014 and 0.055 ppm, respectively. The UCR recombinant was equally active against both Bsph-susceptible and -resistant strains of Cx. Quinquefasciatus; LC50 values were 0.005 and 0.009 and LC90 values were 0.030 and 0.043 ppm, respectively. Bti and the UCR recombinant essentially showed similar activity against Bsph-susceptible and -resistant strains. UCR recombinant showed high toxicity against Ae. eagypti with LC50 and LC90 values of 0.023 and 0.064 ppm, respectively. Bsph was highly active against susceptible strain of Cx. quinequefasciatus with LC50 and LC9o values of 0.006 and 0.024 ppm, respectively. Bsph exhibited little toxicity against Ae. eagypti larvae and also no toxicity to Bsph resistance. In the field, we evaluated four experimental corn grit formulations of Bti (VBC 60021), Bsph (VBC 60022), UCR recombinants VBC 60023 (7.89%), and VBC 60024 (1.87%) in simulated field (microcosms) against Bsph-susceptible Culex mosquitoes. Bti and low-concentrate UCR recombinant showed similar initial activity as well as persistence. Both materials provided high-to-moderate level of control for 2-7 d posttreatment at low treatment rates. At low dosages, residual activity of Bti and UCR recombinant lasted for

  8. Historical reconstruction of a relictual population of wild grapevines (Vitis vinifera SSP sylvestris, Gmelin, Hegi) in a floodplain forest of the upper Seine valley, France

    OpenAIRE

    Arnold, Claire; Schnitzler, Annik; Parisot, Christophe; Maurin, Alexandre

    2011-01-01

    Wild grapevine (Vitis vinifera ssp sylvestris) is considered to be nearly extinct in its western range as a result of the expansion of American diseases combined with drastic hydraulic works in the region. In such a context, the discovery of a population of 120 individuals, offered an excellent opportunity to evaluate the status of the plant at the current edge of its western range. We focussed on the distribution patterns and the reconstruction of the history of the population through a comb...

  9. Transposon Mutagenesis of the Plant-Associated Bacillus amyloliquefaciens ssp. plantarum FZB42 Revealed That the nfrA and RBAM17410 Genes Are Involved in Plant-Microbe-Interactions

    OpenAIRE

    Anto Budiharjo; Soumitra Paul Chowdhury; Kristin Dietel; Barbara Beator; Olga Dolgova; Ben Fan; Wilfrid Bleiss; Jörg Ziegler; Michael Schmid; Anton Hartmann; Rainer Borriss

    2014-01-01

    Bacillus amyloliquefaciens ssp. plantarum FZB42 represents the prototype of Gram-positive plant growth promoting and biocontrol bacteria. In this study, we applied transposon mutagenesis to generate a transposon library, which was screened for genes involved in multicellular behavior and biofilm formation on roots as a prerequisite of plant growth promoting activity. Transposon insertion sites were determined by rescue-cloning followed by DNA sequencing. As in B. subtilis, the global transcri...

  10. Cu,Cr and As determination in preserved woods (Eucalyptus ssp.) by X-ray fluorescence spectrometries; Determinacao de cobre, cromo e arsenio em madeira preservada (Eucalyptus sp.) pelas espectrometrias de fluorescencia de raios X

    Energy Technology Data Exchange (ETDEWEB)

    Pereira Junior, Sergio Matias

    2014-07-01

    Brazil produces around 2.2 millions of cubic meters of treated wood to meet the annual demand of railway, electric, rural and construction sectors. The most used wood species are eucalyptus (Eucalyptus ssp.) and pine (Pinus ssp.).The treated woods used for poles, sleepers, fence posts and plywoods should be according to Brazilian norms requirements. The most usual wood preservative products used in Brazil are CCA (chromated copper arsenate) and CCB (copper chromium and boron salt). The analytical methods, such as flame atomic absorption spectrometry (FAAS), plasma inductively coupled optical emission spectrometry (ICPOES) and X-ray fluorescence spectrometry (XRFS) have been used for the analytical control of those treatment processes. In this work, the eucalyptus trees (Eucalyptus ssp) samples was obtained from Minas Gerais State, Brazil, cut plantation areas. Under pressure, eucalyptus wood samples were submitted to different concentration of CCA solution reaching 3.9, 6.7, 9.1, 12.4 and 14.0 kg of CCA by m-³ sapwood retentions. Samples in cylinders and sawdust forms were obtained from treated wood samples. Copper, chromium and arsenic determination was performed using the energy dispersive X-ray fluorescence spectrometry (EDXRFS), portable X-ray fluorescence spectrometry (PXRFS), flame atomic absorption spectrometry (FAAS) and instrumental neutron activation analysis. In this work, the method of analysis, sensitivity, precision and accuracy performances of the related techniques were outlined. (author)

  11. Differential Expression Analysis of Genic Male Sterility A/B Lines in Chinese Cabbage-Pak-Choi(Brassica Campestris ssp. chinensis Makino)

    Institute of Scientific and Technical Information of China (English)

    WANG Yong-qin; CAO Jia-shu; FU Qing-gong; YU Xiao-lin; YE Wan-zhi; XIANG Xun

    2003-01-01

    To determine differential expression of genic male sterility A/B lines in Chinese cabbage-pakchoi (Brassica campestris ssp. chinensis Makino var. communis Teen et Lee), we used the RNA fingerprinting technique, cDNA-AFLP analysis, in different developmental stages and different tissues. While no obvious differential expressions were observed in rosette leaves, florescence leaves, and scapes, some differential expressions were found in alabstrums of A/B lines and among leaves, scapes and alabstrums. We analyzed the alabstrums collected in different developmental stages with 10 primer combinations. We got a unique band between middle size alabstrums and large alabstrums in B line in one of the ten pair primers, and in another one pair, one band reflecting a higher gene-expression level in A line than that in B line was obtained. No unique bands were found with the other primer combinations. The bands reflecting different gene-expression level were confirmed by Northern hybridization. The results indicated that cDNA-AFLP was a suitable tool for studying differential expression of genic male sterility in plants. SDS-polyacrylamide gel electrophoresis patterns of soluble proteins further verified the difference in A/B lines.

  12. Induced Production of 1-Methoxy-indol-3-ylmethyl Glucosinolate by Jasmonic Acid and Methyl Jasmonate in Sprouts and Leaves of Pak Choi (Brassica rapa ssp. chinensis

    Directory of Open Access Journals (Sweden)

    Hansruedi Glatt

    2013-07-01

    Full Text Available Pak choi plants (Brassica rapa ssp. chinensis were treated with different signaling molecules methyl jasmonate, jasmonic acid, linolenic acid, and methyl salicylate and were analyzed for specific changes in their glucosinolate profile. Glucosinolate levels were quantified using HPLC-DAD-UV, with focus on induction of indole glucosinolates and special emphasis on 1-methoxy-indol-3-ylmethyl glucosinolate. Furthermore, the effects of the different signaling molecules on indole glucosinolate accumulation were analyzed on the level of gene expression using semi-quantitative realtime RT-PCR of selected genes. The treatments with signaling molecules were performed on sprouts and mature leaves to determine ontogenetic differences in glucosinolate accumulation and related gene expression. The highest increase of indole glucosinolate levels, with considerable enhancement of the 1-methoxy-indol-3-ylmethyl glucosinolate content, was achieved with treatments of sprouts and mature leaves with methyl jasmonate and jasmonic acid. This increase was accompanied by increased expression of genes putatively involved in the indole glucosinolate biosynthetic pathway. The high levels of indole glucosinolates enabled the plant to preferentially produce the respective breakdown products after tissue damage. Thus, pak choi plants treated with methyl jasmonate or jasmonic acid, are a valuable tool to analyze the specific protection functions of 1-methoxy-indole-3-carbinole in the plants defense strategy in the future.

  13. Anthocyanin Accumulation, Antioxidant Ability and Stability, and a Transcriptional Analysis of Anthocyanin Biosynthesis in Purple Heading Chinese Cabbage (Brassica rapa L. ssp. pekinensis).

    Science.gov (United States)

    He, Qiong; Zhang, Zhanfeng; Zhang, Lugang

    2016-01-13

    Heading Chinese cabbage (Brassica rapa L. ssp. pekinensis) is a significant dietary vegetable for its edible heading leaves in Asia countries. The new purple anthocyanin-rich pure line (11S91) was successfully bred, and the anthocyanins were mainly distributed in 2-3 cell layers beneath the leaf epidermis, whereas siliques and stems accumulated only a cell layer of anthocyanins. The anthocyanins of 11S91 were more stable at pHs below 3.0 and temperatures below 45 °C. The total antioxidant ability was highly positive correlated with the anthocyanin content in 11S91. Thirty-two anthocyanins were separated and identified, and 70% of them were glycosylated and acylated cyanidins. The four major anthocyanins present were cyanidin-3-sophoroside(p-coumaroyl)-5-glucoside(malonyl), cyanidin-3-sophoroside(ferulyl)-5-glucoside(malonyl), cyanidin-3-sophoroside(sinapyl-p-coumaroyl)-5-glucoside(malonyl), and cyanidin-3-sophoroside-(sinapyl-ferulyl)-5-glucoside(malonyl). According to the expression of biosynthetic genes and the component profile of anthocyanins in 11S91 and its parents, regulatory genes BrMYB2 and BrTT8 probably activate the anthocyanin biosynthesis but other factors may govern the primary anthocyanins and the distribution. PMID:26709726

  14. Consequences of inoculation with native arbuscular mycorrhizal fungi for root colonization and survival of Artemisia tridentata ssp. wyomingensis seedlings after transplanting.

    Science.gov (United States)

    Davidson, Bill E; Novak, Stephen J; Serpe, Marcelo D

    2016-08-01

    In arid environments, the propagule density of arbuscular mycorrhizal fungi (AMF) may limit the extent of the plant-AMF symbiosis. Inoculation of seedlings with AMF could alleviate this problem, but the success of this practice largely depends on the ability of the inoculum to multiply and colonize the growing root system after transplanting. These phenomena were investigated in Artemisia tridentata ssp. wyomingensis (Wyoming big sagebrush) seedlings inoculated with native AMF. Seedlings were first grown in a greenhouse in soil without AMF (non-inoculated seedlings) or with AMF (inoculated seedlings). In spring and fall, 3-month-old seedlings were transplanted outdoors to 24-L pots containing soil from a sagebrush habitat (spring and fall mesocosm experiments) or to a recently burned sagebrush habitat (spring and fall field experiments). Five or 8 months after transplanting, colonization was about twofold higher in inoculated than non-inoculated seedlings, except for the spring field experiment. In the mesocosm experiments, inoculation increased survival during the summer by 24 % (p = 0.011). In the field experiments, increased AMF colonization was associated with increases in survival during cold and dry periods; 1 year after transplanting, survival of inoculated seedlings was 27 % higher than that of non-inoculated ones (p soil, leading to higher rates of survival. PMID:27075898

  15. Determining the persistence of Mycobacterium bovis bacille Calmette-Guerin Danish in select tissues of orally vaccinated feral swine (Sus scrofa ssp.).

    Science.gov (United States)

    Nol, Pauline; Robbe-Austerman, Suelee; Rhyan, Jack C; McCollum, Matt P; Triantis, Joni M; Beltrán-Beck, Beatriz; Salman, Mo D

    2016-02-01

    Mycobacterium bovis bacille Calmette-Guerin (BCG) is being considered for vaccination of feral swine (Sus scrofa ssp.). Since BCG is a live bacterium, evaluation of its safety and persistence in tissues is important. Fifteen feral swine received approximately 4.5 × 10(6) colony forming units of BCG Danish via oral bait. Four animals received bait without BCG. At 1, 3, 6, and 9 months post-vaccination, four vaccinates were euthanized. Non-vaccinates were euthanized at 9 months. Clinical signs were not noted in vaccinated pigs at any time. Tissues from all 20 pigs were culture-negative for mycobacteria. Based on our data, BCG is safe and appears not to persist in feral swine tissues after one month post-oral vaccination. However, further work must be performed at higher doses, and on a larger number of animals representing the target population, and further evaluation of persistence in tissues within the first month post-vaccination is needed. PMID:26850536

  16. Full scale test SSP 34m blade, edgewise loading LTT. Extreme load and PoC{sub I}nvE Data report

    Energy Technology Data Exchange (ETDEWEB)

    Nielsen, Magda; Roczek-Sieradzan, A.; Jensen, Find M. (and others)

    2010-09-15

    This report is the second report covering the research and demonstration project 'Experimental blade research: Structural mechanisms in current and future large blades under combined loading', supported by the EUDP program. A 34m wind turbine blade from SSP-Technology A/S has been tested in edgewise direction (LTT). The blade has been submitted to thorough examination by means of strain gauges, displacement transducers and a 3D optical measuring system. This data report presents results obtained during full scale testing of the blade up to 80% Risoe load, where 80% Risoe load corresponds to 100% certification load. These pulls at 80% Risoe load were repeated and the results from these pulls were compared. The blade was reinforced according to a Risoe DTU invention, where the trailing edge panels are coupled. The coupling is implemented to prevent the out of plane deformations and to reduce peeling stresses in the adhesive joints. Test results from measurements with the reinforcement have been compared to results without the coupling. The report presents only the relevant results for the 80% Risoe load and the results applicable for the investigation of the influence of the invention on the profile deformation. (Author)

  17. Relationships between functional genes in Lactobacillus delbrueckii ssp. bulgaricus isolates and phenotypic characteristics associated with fermentation time and flavor production in yogurt elucidated using multilocus sequence typing.

    Science.gov (United States)

    Liu, Wenjun; Yu, Jie; Sun, Zhihong; Song, Yuqin; Wang, Xueni; Wang, Hongmei; Wuren, Tuoya; Zha, Musu; Menghe, Bilige; Heping, Zhang

    2016-01-01

    Lactobacillus delbrueckii ssp. bulgaricus (L. bulgaricus) is well known for its worldwide application in yogurt production. Flavor production and acid producing are considered as the most important characteristics for starter culture screening. To our knowledge this is the first study applying functional gene sequence multilocus sequence typing technology to predict the fermentation and flavor-producing characteristics of yogurt-producing bacteria. In the present study, phenotypic characteristics of 35 L. bulgaricus strains were quantified during the fermentation of milk to yogurt and during its subsequent storage; these included fermentation time, acidification rate, pH, titratable acidity, and flavor characteristics (acetaldehyde concentration). Furthermore, multilocus sequence typing analysis of 7 functional genes associated with fermentation time, acid production, and flavor formation was done to elucidate the phylogeny and genetic evolution of the same L. bulgaricus isolates. The results showed that strains significantly differed in fermentation time, acidification rate, and acetaldehyde production. Combining functional gene sequence analysis with phenotypic characteristics demonstrated that groups of strains established using genotype data were consistent with groups identified based on their phenotypic traits. This study has established an efficient and rapid molecular genotyping method to identify strains with good fermentation traits; this has the potential to replace time-consuming conventional methods based on direct measurement of phenotypic traits. PMID:26547656

  18. Promotion by 5-Aminolevulinic Acid of Germination of Pakchoi (Brassica campestris ssp. chinensis var. communis Tsen et Lee) Seeds Under Salt Stress

    Institute of Scientific and Technical Information of China (English)

    Liang-Ju WANG; Wei-Bing JIANG; Hui LIU; Wei-Qin LIU; Lang KANG; Xi-Lin HOU

    2005-01-01

    The seed germination and seedling growth of pakchoi (Brassica campestris ssp. chinensis var.communis Tsen et Lee cv. Hanxiao) were not significantly inhibited until the concentration of NaCl was increased to150 mmol/L. Treatment of pakchoi seeds with exogenous 5-aminolevulinic acid (ALA), at concentrations ranging from 0.01 to 10.00 mg/L, promoted seed germination when seeds were stressed by salinity, whereas levulinic acid (LA), an inhibitor of ALA dehydrase, significantly inhibited seed germination and seedling growth, suggesting that metabolism of ALA into porphyrin compounds was necessary for seed germination and seedling growth. Determination of respiratory rate during seed germination showed that ALA increased seed respiration under both normal conditions and salt stress. Furthermore, salt stress decreased levels of endogenous ALA, as well as heme, in etiolated seedlings. More salt-tolerant cultivars of pakchoi contained higher relative levels of endogenous ALA and heme under conditions of salt stress.These results indicate that salt stress may inhibit the biosynthesis of endogenous ALA and then heme,which is necessary for seed germination, and treatment of seeds with exogenous ALA prior to germination may be associated with the biosynthesis of heme.

  19. Overexpression of ppc and lysC to improve the production of 4-hydroxyisoleucine and its precursor l-isoleucine in recombinant Corynebacterium glutamicum ssp. lactofermentum.

    Science.gov (United States)

    Shi, Feng; Fang, Huimin; Niu, Tengfei; Lu, Zhengke

    2016-06-01

    4-hydroxyisoleucine (4-HIL) exhibits unique insulinotropic and insulin-sensitizing activities and is an attractive candidate for the treatment of type II and type I diabetes. In our previous study, l-isoleucine dioxygenase gene (ido) was cloned and overexpressed in an l-isoleucine-producing strain, Corynebacterium glutamicum ssp. lactofermentum SN01, and 4-HIL was produced from the endogenous l-isoleucine (Ile). In this study, ppc and lysC were co-expressed with ido to increase the supply of Ile, the direct precursor of 4-HIL, and to further improve the 4-HIL yield. After 144h of fermentation, the ido-ppc-expressing strain produced 95.72±1.52mM 4-HIL, 29% higher than the ido-expressing strain. The co-expression of lysC and ppc with ido resulted in a further 35% increment of carbon flux to l-aspartate family amino acids biosynthesis pathway. However, the conversion ratio of Ile to 4-HIL and the 4-HIL yield decreased to 0.31mol/mol and 30.16±2.01mM, respectively, likely due to the decreased IDO activity caused by lower pH and higher intracellular Ile concentration. Therefore, co-expression of ido and ppc was benefit for 4-HIL de novo biosynthesis, while co-expression of lysC with ido and ppc decreased the conversion ratio of Ile to 4-HIL. PMID:27178798

  20. Full scale test of a SSP 34m box girder 2. Data report; Reinforced glass fiber/epoxy used in wind turbine blades

    Energy Technology Data Exchange (ETDEWEB)

    Jensen, Find M.; Branner, K.; Nielsen, Per H. (and others)

    2008-05-15

    This report presents the setup and result from three static full-scale tests of the reinforced glass fiber/epoxy box girder used in a 34m wind turbine blade. One test was without reinforcement one with cap reinforcement and the final test was with rib reinforcement. The cap reinforcement test was part of a proof of concept investigation for a patent. The tests were performed at the Blaest test facility in August 2007. The tests are an important part of a research project established in cooperation between Risoe National Laboratory for sustainable energy--Technical university of Denmark, SSP-Technology A/S and Blaest (Blade test centre A/S) and it has been performed as a part of Find Moelholt Jensen's PhD thesis. This report is the second data report containing the complete test data for the three full-scale tests. This report deals only with the test methods and the obtained results, no conclusions are drawn. These can be found in papers and patent referenced in the data report. Various kinds of measuring equipment have been used during these tests: acoustic emission, force transducers, strain gauges and optical deformation measuring system (DIC). The experimental investigation consisted of the following tests: 1) Flapwise bending with no reinforcement 2) Flapwise bending with wire reinforcements 3) Flapwise bending with rib reinforcements. (au)

  1. SILAC and LC-MS/MS identification of Streptococcus equi ssp. zooepidemicus proteins that contribute to mouse brain microvascular endothelial cell infection.

    Science.gov (United States)

    Zhe, Ma; Jie, Peng; Hui, Zhang; Bin, Xu; Xiaomeng, Pei; Huixing, Lin; Chengping, Lu; Hongjie, Fan

    2016-08-01

    Streptococcus equi ssp. zooepidemicus (SEZ) causes meningitis in both humans and animals. Some dissociative proteins of SEZ are cytotoxic to mouse brain microvascular endothelial cells (mBMECs) and may contribute to the penetration of SEZ across the blood-brain barrier (BBB). In this study, the ability of SEZ to penetrate across an in vitro BBB model was confirmed. We used stable isotope labeling with amino acids in cell culture (SILAC) to label SEZ proteins with heavy or light isotope-tagged amino acids, along with LC-MS/MS to determine which SEZ proteins were involved in interactions with mBMECs. The efficiency of SEZ protein isotope labeling was 94.7 %, which was sufficient for further analysis. Forty-nine labeled peptides were identified as binding to mBMECs, which matched to 25 SEZ proteins. Bioinformatic analysis indicated that most of these proteins were cytoplasmic. These proteins may have functions in breaching the host BBB, and some of them are known virulence factors in other bacteria. Indirect immunofluorescence results indicated that SEZ enolase had binding activity toward mBMECs. Protective test results showed that enolase was a protective antigen against SEZ infection. This research is the first application of SILAC combined with LC-MS/MS to identify SEZ proteins that may contribute to the infection of mBMECs and potentially show functions related to breaching the BBB. The outcomes provide many future avenues for research into the mechanism of SEZ-induced meningitis. PMID:27178179

  2. Analysis of Brassica campestris L.ssp.chinensis (L.) Makino var.tai-tsai Hort Karyotype%薹菜的核型分析

    Institute of Scientific and Technical Information of China (English)

    宋廷宇; 韩文妍; 吴春燕; 宋述尧; 何启伟

    2012-01-01

    The chromosome number and kapyotype analysis of Tai-tsai [ Brassica campestris L. ssp. chinensis ( L.) Makino var. tai-tsai Hort ] were studied by using root-tip squashing method in order to obtain accurate cytogenetic information. The results showed that the chromosome number of Tai-tsai diploids is 2n=20, and its karyotype formula is K (In ) =2X=20=7M+2T+St, the composition of relative length of chromosome is 2n=20=2L+4M2+4S, and the chromosome karyotype was 2A.%采用根尖压片法对薹菜进行染色体数目和核型分析.结果表明:薹菜为二倍体,染色体数2n=20,核型公式为K(2n)=2X=20=7M+2T+St,染色体相对长度组成为2n=20=2L+4M2+4S,染色体组型为2A型.

  3. Production of intergeneric allotetraploid between autotetraploid non-heading Chinese cabbage (Brassica campestris ssp. chinensis Makino and autotetraploid radish (Raphanus sativus L.

    Directory of Open Access Journals (Sweden)

    Sun Cheng-Zhen

    2014-03-01

    Full Text Available Intergeneric hybrids between non-heading Chinese cabbage (Brassica campestris ssp. chinensis Makino; 2n = 4x = 40 and radish (Raphanus sativus L.; 2n = 4x = 36 were obtained through ovary culture and embryo rescue. Some hybrid embryos (0.11 per ovary were produced, but only 4 of them germinated. As most hybrid embryos failed to develop into plantlets directly, plants were regenerated by inducing shoots on the cultured cotyledon and inducing roots on the root induction medium. All hybrid plants were morphologically uniform. They resembled the non-heading Chinese cabbage in the long-lived habit, the plant status, the vernalization requirement and the petiole color, while the petiole shape, leaf venation pattern and flowers were more similar to those of radish. Upon examination of the flowers, these were found to have normal pistil, but rudimentary anthers with non-functional pollen grains. The somatic chromosome number of F1 plants was 38. Analysis of SSR banding patterns provided additional confirmation of hybridity.

  4. The autoregulatory role of EsaR, a quorum-sensing regulator in Pantoea stewartii ssp. stewartii: evidence for a repressor function.

    Science.gov (United States)

    Minogue, Timothy D; Wehland-von Trebra, Markus; Bernhard, Frank; von Bodman, Susanne B

    2002-06-01

    Capsular polysaccharide synthesis and virulence in the plant pathogenic bacterium Pantoea stewartii ssp. stewartii requires the quorum-sensing regulatory proteins, EsaR and EsaI, and the diffusible inducer N-(3-oxo-hexanoyl)-L-homoserine lactone. Prior mutational studies suggested that EsaR might function as a repressor of quorum sensing in the control of capsular polysaccharide synthesis. Further, a lux box-like palindromic sequence coinciding with the putative -10 element of the esaR promoter suggested a possible negative autoregulatory role for EsaR. This report presents genetic evidence that EsaR represses the esaR gene under inducer-limiting conditions, and that addition of inducer promotes rapid, dose-dependent derepression. DNA mobility-shift assays and analyses by surface plasmon resonance refractometry show that EsaR binds target DNAs in a ligand-free state, and that inducer alters the binding characteristics of EsaR. Physical measurements indicate that the EsaR protein binds N-(3-oxo-hexanoyl)-L-homoserine lactone, in a 1:1 protein:ligand ratio, and that inducer binding enhances the thermal stability of the EsaR protein. These combined genetic and biochemical data establish that EsaR regulates its own expression by signal-independent repression and signal-dependent derepression. Additionally, we provide evidence that EsaR does not govern the expression of the linked esaI gene, thus EsaR has no role in controlling coinducer synthesis. PMID:12067349

  5. MicroRNA319a-targeted Brassica rapa ssp. pekinensis TCP genes modulate head shape in chinese cabbage by differential cell division arrest in leaf regions.

    Science.gov (United States)

    Mao, Yanfei; Wu, Feijie; Yu, Xiang; Bai, Jinjuan; Zhong, Weili; He, Yuke

    2014-02-01

    Leafy heads of cabbage (Brassica oleracea), Chinese cabbage (Brassica rapa), and lettuce (Lactuca sativa) are composed of extremely incurved leaves. The shape of these heads often dictates the quality, and thus the commercial value, of these crops. Using quantitative trait locus mapping of head traits within a population of 150 recombinant inbred lines of Chinese cabbage, we investigated the relationship between expression levels of microRNA-targeted Brassica rapa ssp. pekinensis TEOSINTE BRANCHED1, cycloidea, and PCF transcription factor4 (BrpTCP4) genes and head shape. Here, we demonstrate that a cylindrical head shape is associated with relatively low BrpTCP4-1 expression, whereas a round head shape is associated with high BrpTCP4-1 expression. In the round-type Chinese cabbage, microRNA319 (miR319) accumulation and BrpTCP4-1 expression decrease from the apical to central regions of leaves. Overexpression of BrpMIR319a2 reduced the expression levels of BrpTCP4 and resulted in an even distribution of BrpTCP4 transcripts within all leaf regions. Changes in temporal and spatial patterns of BrpTCP4 expression appear to be associated with excess growth of both apical and interveinal regions, straightened leaf tips, and a transition from the round to the cylindrical head shape. These results suggest that the miR319a-targeted BrpTCP gene regulates the round shape of leafy heads via differential cell division arrest in leaf regions. Therefore, the manipulation of miR319a and BrpTCP4 genes is a potentially important tool for use in the genetic improvement of head shape in these crops. PMID:24351684

  6. Soil water effect on crop growth, leaf gas exchange, water and radiation use efficiency of Saccharum spontaneum L. ssp. aegyptiacum (Willd. Hackel in semi-arid Mediterranean environment

    Directory of Open Access Journals (Sweden)

    Danilo Scordia

    2015-12-01

    Full Text Available Great effort has been placed to identify the most suited bioenergy crop under different environments and management practices, however, there is still need to find new genetic resources for constrained areas. For instance, South Mediterranean area is strongly affected by prolonged drought, high vapour pressure deficit (VPD and extremely high temperatures during summertime. In the present work we investigated the soil water effect on crop growth and leaf gas exchange of Saccharum spontaneum L. ssp. aegyptiacum (Willd. Hackel, a perennial, rhizomatous, herbaceous grass. Furthermore, the net increase of biomass production per unit light intercepted [radiation use efficiency (RUE] and per unit water transpired [water use efficiency (WUE] was also studied. To this end a field trial was carried out imposing three levels of soil water availability (I100, I50 and I0, corresponding to 100%, 50% and 0% of ETm restutition under a semi-arid Mediterranean environment. Leaf area index (LAI, stem height, biomass dry matter yield, CO2 assimilation rate, and transpiration rate resulted significantly affected by measurement time and irrigation treatment, with the highest values in I100 and the lowest in I0. RUE was the highest in I100 followed by I50 and I0; on the other hand, WUE was higher in I0 than I50 and I100. At LAI values greater than 2.0, 85% photosynthetically active radiation was intercepted by the Saccharum stand, irrespective of the irrigation treatment. Saccharum spontaneum spp. aegyptiacum is a potential species for biomass production in environment characterized by drought stress, high temperatures and high VPD, as those of Southern Europe and similar semi-arid areas.

  7. Resequencing of Treponema pallidum ssp. pallidum Strains Nichols and SS14: Correction of Sequencing Errors Resulted in Increased Separation of Syphilis Treponeme Subclusters

    Science.gov (United States)

    Strouhal, Michal; Čejková, Darina; Zobaníková, Marie; Mikalová, Lenka; Sodergren, Erica; Weinstock, George M.; Šmajs, David

    2013-01-01

    Background Treponema pallidum ssp. pallidum (TPA), the causative agent of syphilis, is a highly clonal bacterium showing minimal genetic variability in the genome sequence of individual strains. Nevertheless, genetically characterized syphilis strains can be clearly divided into two groups, Nichols-like strains and SS14-like strains. TPA Nichols and SS14 strains were completely sequenced in 1998 and 2008, respectively. Since publication of their complete genome sequences, a number of sequencing errors in each genome have been reported. Therefore, we have resequenced TPA Nichols and SS14 strains using next-generation sequencing techniques. Methodology/Principal Findings The genomes of TPA strains Nichols and SS14 were resequenced using the 454 and Illumina sequencing methods that have a combined average coverage higher than 90x. In the TPA strain Nichols genome, 134 errors were identified (25 substitutions and 109 indels), and 102 of them affected protein sequences. In the TPA SS14 genome, a total of 191 errors were identified (85 substitutions and 106 indels) and 136 of them affected protein sequences. A set of new intrastrain heterogenic regions in the TPA SS14 genome were identified including the tprD gene, where both tprD and tprD2 alleles were found. The resequenced genomes of both TPA Nichols and SS14 strains clustered more closely with related strains (i.e. strains belonging to same syphilis treponeme subcluster). At the same time, groups of Nichols-like and SS14-like strains were found to be more distantly related. Conclusion/Significance We identified errors in 11.5% of all annotated genes and, after correction, we found a significant impact on the predicted proteomes of both Nichols and SS14 strains. Corrections of these errors resulted in protein elongations, truncations, fusions and indels in more than 11% of all annotated proteins. Moreover, it became more evident that syphilis is caused by treponemes belonging to two separate genetic subclusters. PMID

  8. Determination of ACC-induced cell-programmed death in roots of Vicia faba ssp. minor seedlings by acridine orange and ethidium bromide staining.

    Science.gov (United States)

    Byczkowska, Anna; Kunikowska, Anita; Kaźmierczak, Andrzej

    2013-02-01

    Fluorescence staining with acridine orange (AO) and ethidium bromide (EB) showed that nuclei of cortex root cells of 1-aminocyclopropane-1-carboxylic acid (ACC)-treated Vicia faba ssp. minor seedlings differed in color. Measurement of resultant fluorescence intensity (RFI) showed that it increased when the color of nuclear chromatin was changed from green to red, indicating that EB moved to the nuclei via the cell membrane which lost its integrity and stained nuclei red. AO/EB staining showed that changes in color of the nuclear chromatin were accompanied by DNA condensation, nuclei fragmentation, and chromatin degradation which were also shown after 4,6-diamidino-2-phenylindol staining. These results indicate that ACC induced programmed cell death. The increasing values of RFI together with the corresponding morphological changes of nuclear chromatin were the basis to prepare the standard curve; cells with green unchanged nuclear chromatin were alive while those with dark orange and bright red nuclei were dead. The cells with nuclei with green-yellow, yellow-orange, and bright orange chromatin with or without their condensation and fragmentation chromatin were dying. The prepared curve has became the basis to draw up the digital method for detection and determination of the number of living, dying, and dead cells in an in planta system and revealed that ACC induced death in about 20% of root cortex cells. This process was accompanied by increase in ion leakage, shortening of cells and whole roots, as well as by increase in weight and width of the apical part of roots and appearance of few aerenchymatic spaces while not by internucleosomal DNA degradation. PMID:22350735

  9. Dairy farms testing positive for Mycobacterium avium ssp. paratuberculosis have poorer hygiene practices and are less cautious when purchasing cattle than test-negative herds.

    Science.gov (United States)

    Wolf, R; Barkema, H W; De Buck, J; Orsel, K

    2016-06-01

    Mycobacterium avium ssp. paratuberculosis (MAP), the causative agent of Johne's disease, is present on most dairy farms in Alberta, causing economic losses and presenting a potential public health concern. The objective of this cross-sectional study was to identify risk factors for Alberta dairy herds being MAP-positive based on environmental samples (ES). Risk assessments were conducted and ES were collected on 354 Alberta dairy farms (62% of eligible producers) voluntarily participating in the Alberta Johne's Disease Initiative. In univariate logistic regression, risk factors addressing animal and pen hygiene, as well as the use of feeding equipment to remove manure and manure application on pastures, were all associated with the number of positive ES. Furthermore, based on factor analysis, risk factors were clustered and could be summarized as 4 independent factors: (1) animal, pen, and feeder contamination; (2) shared equipment and pasture contamination; (3) calf diet; and (4) cattle purchase. Using these factor scores as independent variables in multivariate logistic regression models, a 1-unit increase in animal, pen, and feeder contamination resulted in 1.31 times higher odds of having at least 1 positive ES. Furthermore, a 1-unit increase in cattle purchase also resulted in 1.31 times the odds of having at least 1 positive ES. Finally, a 100-cow increase in herd size resulted in an odds ratio of 2.1 for having at least 1 positive ES. In conclusion, cleanliness of animals, pens, and feeders, as well as cattle purchase practices, affected risk of herd infection with MAP. Therefore, improvements in those management practices should be the focus of effective tools to control MAP on dairy farms. PMID:26995127

  10. Full scale test of a SSP 34m box girder 1. Data report; Reinforced glass fiber/expoxy used in wind turbine blades

    Energy Technology Data Exchange (ETDEWEB)

    Jensen, Find M.; Branner, K.; Nielsen, Per H. (and others)

    2008-03-15

    This report presents the setup and result of a full-scale test of a reinforced glass fibre/epoxy box girder used in 34m wind turbine blade. The tests were performed at the Blaest test facility in August 2006. The test is an important part of a research project established in cooperation between Risoe DTU, the National Laboratory for Sustainable Energy at the Technical University of Denmark -, SSP-Technology A/S and Blaest (Blade test centre A/S) and it has been performed as a part of Find Moelholt Jensen's PhD study. This report contains the complete test data for the final test, in which the box girder was loaded until failure. A comprehensive description of the test setup is given. This report deals only with tests and results. There are no conclusions on the data in this report, but references are given to publications, where the data are used and compared with FEM etc. Various kinds of measuring equipment have been used during these tests: acoustic emission, 330 strain gauges, 24 mechanical displacement devices and two optical deformation measuring systems. The mechanical displacement devices measured both global (absolute) and local (relative) deflection and the optical systems measured surface deformation. A prediction was made on the location of the failure of the girder. At this location the majority of the measuring equipment was concentrated. The prediction was proved to be correct and valuable information of the behaviour of the box girder prior to failure was obtained. The experimental investigation consisted of the following load configurations: -Flapwise bending -Torsion Ultrasonic scanning of the box girder was performed before, during and after the test the box girder. This was done to investigate whether the girder was damaged by the load or imperfection (productions defects) growth. (au)

  11. Resequencing of Treponema pallidum ssp. pallidum strains Nichols and SS14: correction of sequencing errors resulted in increased separation of syphilis treponeme subclusters.

    Directory of Open Access Journals (Sweden)

    Helena Pětrošová

    Full Text Available BACKGROUND: Treponema pallidum ssp. pallidum (TPA, the causative agent of syphilis, is a highly clonal bacterium showing minimal genetic variability in the genome sequence of individual strains. Nevertheless, genetically characterized syphilis strains can be clearly divided into two groups, Nichols-like strains and SS14-like strains. TPA Nichols and SS14 strains were completely sequenced in 1998 and 2008, respectively. Since publication of their complete genome sequences, a number of sequencing errors in each genome have been reported. Therefore, we have resequenced TPA Nichols and SS14 strains using next-generation sequencing techniques. METHODOLOGY/PRINCIPAL FINDINGS: The genomes of TPA strains Nichols and SS14 were resequenced using the 454 and Illumina sequencing methods that have a combined average coverage higher than 90x. In the TPA strain Nichols genome, 134 errors were identified (25 substitutions and 109 indels, and 102 of them affected protein sequences. In the TPA SS14 genome, a total of 191 errors were identified (85 substitutions and 106 indels and 136 of them affected protein sequences. A set of new intrastrain heterogenic regions in the TPA SS14 genome were identified including the tprD gene, where both tprD and tprD2 alleles were found. The resequenced genomes of both TPA Nichols and SS14 strains clustered more closely with related strains (i.e. strains belonging to same syphilis treponeme subcluster. At the same time, groups of Nichols-like and SS14-like strains were found to be more distantly related. CONCLUSION/SIGNIFICANCE: We identified errors in 11.5% of all annotated genes and, after correction, we found a significant impact on the predicted proteomes of both Nichols and SS14 strains. Corrections of these errors resulted in protein elongations, truncations, fusions and indels in more than 11% of all annotated proteins. Moreover, it became more evident that syphilis is caused by treponemes belonging to two separate genetic

  12. A survey of FLS2 genes from multiple citrus species identifies candidates for enhancing disease resistance to Xanthomonas citri ssp. citri.

    Science.gov (United States)

    Shi, Qingchun; Febres, Vicente J; Jones, Jeffrey B; Moore, Gloria A

    2016-01-01

    Pathogen-associated molecular patterns (PAMPs)-triggered immunity (PTI) is an important component of plant innate immunity. In a previous study, we showed that the PAMP flg22 from Xanthomonas citri ssp. citri (Xflg22), the causal agent of citrus canker, induced PTI in citrus, which correlated with the observed levels of canker resistance. Here, we identified and sequenced two bacterial flagellin/flg22 receptors (FLS2-1 and FLS2-2) from 'Duncan' grapefruit (Citrus paradisi, CpFLS2-1 and CpFLS2-2) and 'Sun Chu Sha' mandarin (C. reticulata, CrFLS2-1 and CrFLS2-2). We were able to isolate only one FLS2 from 'Nagami' kumquat (Fortunella margarita, FmFLS2-1) and gene flanking sequences suggest a rearrangement event that resulted in the deletion of FLS2-2 from the genome. Phylogenetic analysis, gene structure and presence of critical amino acid domains all indicate we identified the true FLS2 genes in citrus. FLS2-2 was more transcriptionally responsive to Xflg22 than FLS2-1, with induced expression levels higher in canker-resistant citrus than in susceptible ones. Interestingly, 'Nagami' kumquat showed the highest FLS2-1 steady-state expression levels, although it was not induced by Xflg22. We selected FmFLS2-1, CrFLS2-2 and CpFLS2-2 to further evaluate their capacity to enhance bacterial resistance using Agrobacterium-mediated transient expression assays. Both FmFLS2-1 and CrFLS2-2, the two proteins from canker-resistant species, conferred stronger Xflg22 responses and reduced canker symptoms in leaves of the susceptible grapefruit genotype. These two citrus genes will be useful resources to enhance PTI and achieve resistance against canker and possibly other bacterial pathogens in susceptible citrus types. PMID:27222722

  13. RECRIA DE TERNEROS A BASE DE PASTOREO DE TAGASASTE (Chamaecytisus proliferus ssp. palmensis SUPLEMENTADOS CON AVENA GRANO EN LA PROVINCIA DE ARAUCO, CHILE Calf fattening based on tagasaste (Chamaecytisus proliferus ssp. palmensis grazing and supplemented by oats in Arauco province, Chile

    Directory of Open Access Journals (Sweden)

    Germán Klee G.

    2003-01-01

    Full Text Available El experimento tuvo como objetivo evaluar las variaciones de peso vivo (PV de terneros en pastoreo otoño - invierno de tagasaste (Chamaecytisus proliferus ssp. palmensis, de cuatro años de edad, 2.500 árboles ha-1, establecido sobre pradera natural, y evaluar el efecto de la suplementación con dos niveles de avena grano (Avena sativa L.. Se utilizaron 18 terneros Holando Europeo x Aberdeen Angus o Hereford, de 184 kg PV y 7,5 meses de edad. Los tratamientos fueron: T1: pastoreo de tagasaste; T2: T1 + 2 kg diarios de avena ternero-1; y T3: T1 + 4 kg diarios de avena ternero-1. Las ganancias diarias de PV fueron significativamente distintas (P The objective of this experiment was to evaluate the liveweight (LW gains of calves grazing during the fall-winter season on 4 year-old tagasaste (Chamaecytisus proliferus ssp. palmensis, 2.500 trees per ha, planted on natural pasture, and to evaluate the effect of two levels of oat (Avena sativa L. grain supplementation. Eighteen Holstein x Aberdeen Angus or Hereford bull calves of 184 kg liveweight and 7.5 months of age were used. The treatments studied were: T1: Tagasaste grazing; T2: Tagasaste grazing plus 2 kg of oats calf-1 day-1; and T3: Tagasaste grazing plus 4 kg of oats calf-1 day-1. The daily LW gain differed significantly (P < 0.05 and was 0.6, 1.8, and 1.10 kg calf-1 and 270, 382 and 529 kg ha-1 in the treatments T1, T2 and T3, respectively. The estimated consumption of tagasaste DM (leaves and soft stems was 3.7 kg DM bull-calf - 1 day-1. The components of tagasaste plants were 25.3% leaves, 11.3% tender stems and 63.4% woody stems. The mean DM per bush was 1983 g plant-1 and 4,957 kg ha-1. The CP and ME content in leaves were 21.8% and 2.4 Mcal kg-1; in soft stems were 9% and 1.71 Mcal kg-1; in ripe stems 3.4% and 1.9 Mcal kg-1, respectively. Tagasaste was an acceptable resource for winter grazing that on being supplemented with oat grainpermitted significantly better liveweight gains.

  14. Características da bacteriocina produzida por Lactococcus lactis ssp. hordniae CTC 484 e seu efeito sobre Listeria monocytogenes em carne bovina Characterisation of the bacteriocin produced by Lactococcus lactis ssp. hordniae CTC 484 and the effect of this compound on Listeria monocytogenes in beef

    Directory of Open Access Journals (Sweden)

    Renata Bromberg

    2006-03-01

    Full Text Available O isolamento de linhagens de bactérias lácticas produtoras de bacteriocinas em carnes e seus produtos derivados resultou na detecção de Lactococcus lactis ssp. hordniae CTC 484, proveniente de frango. A bacteriocina inibiu não apenas uma outra bactéria láctica (Lactobacillus helveticus, mas também microorganismos patogênicos (Staphylococcus aureus, Listeria monocytogenes, Bacillus cereus, Clostridium perfringens e Enterococcus faecalis. Ela foi inativada por causa de enzimas como: alfa-quimotripsina, tripsina, pronase E, ficina, pepsina, papaína e lipase. Além disso, a bacteriocina mostrou-se termoestável, mesmo a temperaturas de autoclavagem (121°C/10 min e foi produzida em condições de armazenamento sob refrigeração. A bacteriocina mostrou-se ativa dentro de uma ampla faixa de valores de pH (2-10, porém a maior atividade ocorreu em valores menores de pH. A eficiência da linhagem CTC 484, assim como a de sua bacteriocina na redução e inibição do crescimento de Listeria monocytogenes em carne bovina estéril, foram avaliadas. Os resultados indicaram que o tratamento da carne por meio da inoculação desta bactéria contribuiu para o aumento da segurança e extensão da vida útil deste alimento.Screening for the bacteriocin production of strains of lactic acid bacteria from various meat and meat products resulted in the detection of a bacteriocin-producing Lactococcus lactis ssp. hordniae CTC 484, isolated from chicken. The bacteriocin inhibited not only closely related lactic acid bacterium (Lactobacillus helveticus, but also pathogenic microorganisms (Staphylococcus aureus, Listeria monocytogenes, Bacillus cereus, Clostridium perfringens, and Enterococcus faecalis. This compound was inactivated by alpha-chymotrypsin, trypsin, pronase E, ficin, pepsin, papain, and also by lipase. It was heat stable even at autoclaving temperature (121°C/10 min and was produced under refrigerated storage. It was also active over a wide

  15. Otimização de metodologia PCR-SSP para identificação de polimorfismos genéticos de TNF e IL2 Optimization of the PCR-SSP methodology in the identification of TNF and IL2 genetic polymorphisms

    Directory of Open Access Journals (Sweden)

    Danilo A. S. Franceschi

    2009-08-01

    Full Text Available A análise de polimorfismos únicos de nucleotídeos (SNPs de citocinas pode ser útil em estudos de frequências alélicas e genotípicas em populações saudáveis de diversas regiões, em estudos de associação com doenças infecciosas ou autoimunes, em estudos antropológicos e na evolução pós-transplante. Estes SNPs podem ser avaliados por diferentes métodos moleculares. O objetivo deste estudo foi aperfeiçoar uma metodologia PCR-SSP simples e rápida para a genotipagem de três SNPs de citocinas usando um único teste laboratorial. Para a identificação de IL2-330T/G e IL2+166G/T foram utilizados dois procedimentos na mesma genotipagem, cada um baseado no uso de quatro iniciadores. Para a detecção de TNF-238G/A foram utilizados dois iniciadores que amplificam a guanina e adenina na posição -238. Este estudo permitiu aperfeiçoar um método simples e rápido para identificar três SNPs de citocinas num único teste, podendo ser utilizado em qualquer laboratório de biologia molecular, como alternativa ao uso de kits de alto custo.The analysis of cytokine single nucleotide polymorphisms (SNPs can be useful in studies of allelic and genotypic frequencies in healthy populations from different regions of Brazil, in association studies of infectious or auto-immune diseases, in anthropological studies and in studies on post-transplant evolution. These SNPs can be assessed by different molecular methods. The objective of this study was to improve a simple and fast methodology, PCR-SSP, for the genotyping of three cytokine SNPs using a single laboratorial test. To identify IL2-330T/G and IL2+166G/T, two procedures were used in the same genotyping assay, each one based on the use of 4 primers. To detect TNF-238G/A, two primers were used that amplify guanine and adenine at position -238. This study enabled the improvement of a simple and fast method for identifying three cytokine SNPs in a single test, which can be adopted in any Molecular

  16. Scientific Opinion on the safety assessment of the process LPR based on EREMA Advanced and Colortronic SSP ® technology used to recycle post-consumer PET into food contact materials

    OpenAIRE

    EFSA Panel on Food Contact Materials, Enzymes, Flavourings and Processing Aids (CEF)

    2014-01-01

    This scientific opinion of the EFSA Panel on Food Contact Materials, Enzymes, Flavourings and Processing Aids deals with the safety assessment of the recycling process LPR (EU register No RECYC061) which is based on the EREMA advanced and Colortronic SSP ® technologies. The input to the process is hot caustic washed and dried PET flakes originating from collected post-consumer PET bottles and containing no more than 5 % of PET from non-food consumer applications. In this process, washed and d...

  17. Neuronal protein gene product 9.5 (IEF SSP 6104) is expressed in cultured human MRC-5 fibroblasts of normal origin and is strongly down-regulated in their SV40 transformed counterparts

    DEFF Research Database (Denmark)

    Honoré, B; Rasmussen, H H; Vandekerckhove, J;

    1991-01-01

    Neuronal protein gene product 9.5 (PGP 9.5) most likely identical to ubiquitin carboxyl-terminal hydrolase isozyme L1 (UCH-L1) has been reported to be expressed almost exclusively in neuronal and neuroendocrine tissues. By two-dimensional (2D) immunoblotting, comigration and microsequencing of...... proteins recovered from 2D gels we have identified PGP 9.5 UCH-L1 as polypeptide IEF SSP 6104 (Mr = 27,000, pI = 5.49) in the comprehensive 2D gel cellular protein database of human embryonal lung MRC-5 fibroblasts [(1989) Electrophoresis 10, 76 115; (1990) Electrophoresis 11, 1072 1113]. This protein is...

  18. Effects of synbiotic fermented milk containing Lactobacillus acidophilus La-5 and Bifidobacterium animalis ssp. lactis BB-12 on the fecal microbiota of adults with irritable bowel syndrome: A randomized double-blind, placebo-controlled trial.

    Science.gov (United States)

    Bogovič Matijašić, Bojana; Obermajer, Tanja; Lipoglavšek, Luka; Sernel, Tjaša; Locatelli, Igor; Kos, Mitja; Šmid, Alenka; Rogelj, Irena

    2016-07-01

    We conducted a randomized double-blind, placebo-controlled multicentric study to investigate the influence of a synbiotic fermented milk on the fecal microbiota composition of 30 adults with irritable bowel syndrome (IBS). The synbiotic product contained Lactobacillus acidophilus La-5, Bifidobacterium animalis ssp. lactis BB-12, Streptococcus thermophilus, and dietary fiber (90% inulin, 10% oligofructose), and a heat-treated fermented milk without probiotic bacteria or dietary fiber served as placebo. Stool samples were collected after a run-in period, a 4-wk consumption period, and a 1-wk follow-up period, and were subjected to real-time PCR and 16S rDNA profiling by next-generation sequencing. After 4wk of synbiotic (11 subjects) or placebo (19 subjects) consumption, a greater increase in DNA specific for L. acidophilus La-5 and Bifidobacterium animalis ssp. lactis was detected in the feces of the synbiotic group compared with the placebo group by quantitative real-time PCR. After 1wk of follow-up, the content of L. acidophilus La-5 and B. animalis ssp. lactis decreased to levels close to initial levels. No significant changes with time or differences between the groups were observed for Lactobacillus, Enterobacteriaceae, Bifidobacterium, or all bacteria. The presence of viable BB-12- and La-5-like bacteria in the feces resulting from the intake of synbiotic product was confirmed by random amplification of polymorphic DNA (RAPD)-PCR. At the end of consumption period, the feces of all subjects assigned to the synbiotic group contained viable bacteria with a BB-12-like RAPD profile, and after 1wk of follow-up, BB-12-like bacteria remained in the feces of 87.5% of these subjects. The presence of La-5-like colonies was observed less frequently (37.5 and 25% of subjects, respectively). Next-generation sequencing of 16S rDNA amplicons revealed that only the percentage of sequences assigned to Strep. thermophilus was temporarily increased in both groups, whereas the

  19. 中国沙棘染色体核型及进化研究%Study on the Chromosome Karyotype and Evolution of Hippophae rhamnoides Linn.ssp.sinensis Roust

    Institute of Scientific and Technical Information of China (English)

    王彬

    2011-01-01

    The chromosome karyotype of Hippophae rhamnoides Linn. ssp. sinensis Rousi was analyzed. The results indicated that the chromosome numher of H. rhamnoides ssp. sinensis was 2n=24. basic number was 12, no aneuploidy and polyploid was observed in the chromosome; The karyotype formula was 2n=24=14M+1Om, no satellites were observed in the chromosome. the relative length of the chromosome composition was 2n=4L+6M2+1OM1+4S, the karyotype belonged to "1B" type, the asymmetry coefficient of karyotype was 54%. Based on the Stebbins' evolution theory of the chromosome karyotype and the method for ordering and assignment of cladistic systematics, four important traits were analyzed. The results indicated that the evolution index of chromosome karyotype of H. rhamnoides ssp. sinensis was three. the evolution extent was low, belonging to the more primitive species; this study provided the cytology theory basis for the development of the resources. breeding and variety classification.%对中国沙棘(Hippophae rhamnoides Linn.ssp.sinensis Rousi)的染色体进行了核型分析,结果表明,中国沙棘染色体数目为2n=24,基数为12,未发现具有非整倍体和多倍体的个体;其核型公式为2n=24=14M+10m,染色体中未发现随体,染色体相对长度组成为2n=4L+6M2+10M1+4S,核型属于"1B"型,核型不对称系数As.K为54%.同时.根据Stebbins的核型进化理论和分支系统学的编序、赋值方法.对核型的4个重要性状进行了分析,结果表明,中国沙棘染色体的进化指数为3,进化程度较低,属于较原始种;这些研究结果为中国沙棘资源的开发、良种的选育和分类提供了细胞学理论依据.

  20. Cratoxylum formosum (Jack) Dyer ssp. pruniflorum (Kurz) Gogel. (Hóng yá mù) extract induces apoptosis in human hepatocellular carcinoma HepG2 cells through caspase-dependent pathways

    OpenAIRE

    Nonpunya, Apiyada; Weerapreeyakul, Natthida; Barusrux, Sahapat

    2014-01-01

    Background Cratoxylum formosum (Jack) Dyer ssp. pruniflorum (Kurz) Gogel. (Hóng yá mù) (CF) has been used for treatment of fever, cough, and peptic ulcer. Previously, a 50% ethanol-water extract from twigs of CF was shown highly selective in cytotoxicity against cancer cells. This study aims to investigate the molecular mechanisms underlying the apoptosis-inducing effect of CF. Methods The cytotoxicity of CF was evaluated in the human hepatocellular carcinoma (HCC) HepG2 cell line in comparis...

  1. A phase 1 randomized study evaluating the effect of omeprazole on the pharmacokinetics of a novel 5-hydroxytryptamine receptor 4 agonist, revexepride (SSP-002358, in healthy adults

    Directory of Open Access Journals (Sweden)

    Pierce D

    2015-02-01

    Full Text Available David Pierce,1 Mary Corcoran,2 Maria Velinova,3 Stuart Hossack,4 Mieke Hoppenbrouwers,5 Patrick Martin,21Shire, Basingstoke, UK; 2Shire, Wayne, PA, USA; 3PRA International, Zuidlaren, the Netherlands; 4Covance, Leeds, UK; 5Shire-Movetis NV, Turnhout, BelgiumBackground: About 30% of patients with gastroesophageal reflux disease continue to experience symptoms despite treatment with proton pump inhibitors. The 5-hydroxytryptamine 4 receptor agonist revexepride (SSP-002358 is a novel prokinetic that stimulates gastrointestinal motility, which has been suggested as a continued cause of symptoms in these patients. The aim of this study was to assess whether revexepride pharmacokinetics were affected by co-administration of omeprazole, in preparation for a proof-of-concept evaluation of revexepride added to proton pump inhibitor treatment.Methods: In this phase 1, open-label, randomized, two-period crossover study, healthy adults aged 18–55 years were given a single dose of revexepride 1 mg or revexepride 1 mg + omeprazole 40 mg. Pharmacokinetic parameters were assessed for up to 48 hours after administration of the investigational product. Adverse events, clinical chemistry and hematology parameters, electrocardiograms, and vital signs were monitored.Results: In total, 42 participants were enrolled and 40 completed the study. The median age was 24 years (18–54 years, 55% were women and 93% were white. The pharmacokinetic parameters of revexepride were similar without or with omeprazole co-administration. The mean area under the plasma concentration–time curve from time 0 to infinity (AUC0–∞ was 23.3 ng · h/mL (standard deviation [SD]: 6.33 ng · h/mL versus 24.6 ng · h/mL (SD: 6.31 ng · h/mL, and maximum plasma concentrations (Cmax were 3.89 ng/mL (SD: 1.30 ng/mL and 4.12 ng/mL (SD: 1.29 ng/mL in participants without and with omeprazole, respectively. For AUC0–∞ and Cmax, the 90% confidence intervals for the ratios of geometric least

  2. Characterization and expression profiling of MYB transcription factors against stresses and during male organ development in Chinese cabbage (Brassica rapa ssp. pekinensis).

    Science.gov (United States)

    Saha, Gopal; Park, Jong-In; Ahmed, Nasar Uddin; Kayum, Md Abdul; Kang, Kwon-Kyoo; Nou, Ill-Sup

    2016-07-01

    MYB proteins comprise a large family of plant transcription factors that play regulatory roles in different biological processes such as plant development, metabolism, and defense responses. To gain insight into this gene superfamily and to elucidate its roles in stress resistance, we performed a comprehensive genome-wide identification, characterization, and expression analysis of MYB genes in Chinese cabbage (Brassica rapa ssp. pekinensis). We identified 475 Chinese cabbage MYB genes, among which most were from R2R3-MYB (256 genes) and MYB-related (202) subfamilies. Analysis of sequence characteristics, phylogenetic classification, and protein motif structures confirmed the existence of several categories (1R, 2R, 3R, 4R, and 5R) of Chinese cabbage MYB genes, which is comparable with MYB genes of other crops. An extensive in silico functional analysis, based on established functional properties of MYB genes from different crop species, revealed 11 and four functional clades within the Chinese cabbage R2R3-MYB and MYB-related subfamilies, respectively. In this study, we reported a MYB-like group within the MYB-related subfamily contains 77 MYB genes. Expression analysis using low temperature-treated whole-genome microarray data revealed variable transcript abundance of 1R/2R/3R/4R/5R-MYB genes in 11 clusters between two inbred lines of Chinese cabbage, Chiifu and Kenshin, which differ in cold tolerance. In further validation tests, we used qRT-PCR to examine the cold-responsive expression patterns of 27 BrMYB genes; surprisingly, the MYB-related genes were induced more highly than the R2R3-MYB genes. In addition, we identified 10 genes with corresponsive expression patterns from a set of salt-, drought-, ABA-, JA-, and SA-induced R2R3-MYB genes. We identified 11 R2R3-MYBs functioning in resistance against biotic stress, including 10 against Fusarium oxysporum f.sp. conglutinans and one against Pectobacterium carotovoram subsp. caratovorum. Furthermore, based on

  3. Paratuberculosis: decrease in milk production of German Holstein dairy cows shedding Mycobacterium avium ssp. paratuberculosis depends on within-herd prevalence.

    Science.gov (United States)

    Donat, K; Soschinka, A; Erhardt, G; Brandt, H R

    2014-05-01

    Paratuberculosis impairs productivity of infected dairy cows because of reduced milk production and fertility and enhanced risk of culling. The magnitude of the milk yield depression in individual cows is influenced by factors such as parity, the stage of the disease and the choice of test used. The objectives of this case-control study were to substantiate the influence of the different levels of the within-herd prevalence (WHP) on individual milk yield of fecal culture (FC)-positive cows (FC+) compared with FC-negative herd-mates (FC-), and to estimate the magnitude of the deviation of the milk yield, milk components and somatic cell count (SCC) in an FC-based study. Of a total of 31 420 cows from 26 Thuringian dairy herds tested for paratuberculosis by FC, a subset of 1382 FC+ and 3245 FC- with milk recording data were selected as cases and controls, respectively. The FC- cows were matched for the same number and stage of lactation (±10 days in milk) as one FC+ from the same herd. Within a mixed model analysis using the fixed effects of Mycobacterium avium ssp. paratuberculosis (MAP) status, lactation number, days in milk, prevalence class of farm and the random effect of farm on milk yield per day (kg), the amount of fat and protein (mg/dl) and lactose (mg/dl) as well as the SCC (1000/ml) were measured. On the basis of least square means, FC+ cows had a lower test-day milk yield (27.7±0.6 kg) compared with FC- (29.0±0.6 kg), as well as a lower milk protein content and a slightly diminished lactose concentration. FC status was not associated with milk fat percentage or milk SCC. In FC+ cows, reduction in milk yield increased with increasing WHP. An interaction of FC status and farm was found for the test-day milk yield, and milk protein percentage, respectively. We conclude that the reduction in milk yield of FC+ cows compared with FC- herd-mates is significantly influenced by farm effects and depends on WHP class. Owners of MAP-positive dairy herds may

  4. Computer-assisted system for diagnosing degenerative dementia using cerebral blood flow SPECT and 3D-SSP. A multicenter study

    International Nuclear Information System (INIS)

    Due to increasing numbers of patients with dementia, more physicians who do not specialize in brain nuclear medicine are being asked to interpret SPECT images of cerebral blood flow. We conducted a multicenter study to determine whether a computer-assisted diagnostic system Z-score summation analysis method (ZSAM) using three-dimensional stereotactic surface projections (3D-SSP) can differentiate Alzheimer's disease (AD)/dementia with Lewy bodies (DLB) and non-AD/DLB in institutions using various types of gamma cameras. We determined the normal thresholds of Z-sum (summed Z-score) within a template region of interest for each single photon emission computed tomography (SPECT) device and then compared them with the Z-sums of patients and calculated the accuracy of the differential diagnosis by ZSAM. We compared the diagnostic accuracy between ZSAM and visual assessment. We enrolled 202 patients with AD (mean age, 76.8 years), 40 with DLB (mean age 76.3 years) and 36 with non-AD/DLB (progressive supranuclear palsy, n=10; frontotemporal dementia, n=20; slowly progressive aphasia, n=2 and one each with idiopathic normal pressure hydrocephalus, corticobasal degeneration, multiple system atrophy and Parkinson's disease) who underwent N-isopropyl-p-[123I] iodoamphetamine cerebral blood flow SPECT imaging at each participating institution. The ZSAM sensitivity to differentiate between AD/DLB and non-AD/DLB in all patients, as well as those with mini-mental state examination scores of ≥24 and 20-23 points were 88.0, 78.0 and 88.4%, respectively, with specificity of 50.0, 44.4 and 60.0%, respectively. The diagnostic accuracy rates were 83.1, 72.9 and 84.2%, respectively. The areas under receiver operating characteristics curves for visual inspection by four expert raters were 0.74-0.84, 0.66-0.85 and 0.81-0.93, respectively, in the same patient groups. The diagnostic accuracy rates were 70.9-89.2%, 50.9-84.8% and 76.2-93.1%, respectively. The diagnostic accuracy

  5. Evaluation of testing strategies to identify infected animals at a single round of testing within dairy herds known to be infected with Mycobacterium avium ssp. paratuberculosis.

    Science.gov (United States)

    More, S J; Cameron, A R; Strain, S; Cashman, W; Ezanno, P; Kenny, K; Fourichon, C; Graham, D

    2015-08-01

    As part of a broader control strategy within herds known to be infected with Mycobacterium avium ssp. paratuberculosis (MAP), individual animal testing is generally conducted to identify infected animals for action, usually culling. Opportunities are now available to quantitatively compare different testing strategies (combinations of tests) in known infected herds. This study evaluates the effectiveness, cost, and cost-effectiveness of different testing strategies to identify infected animals at a single round of testing within dairy herds known to be MAP infected. A model was developed, taking account of both within-herd infection dynamics and test performance, to simulate the use of different tests at a single round of testing in a known infected herd. Model inputs included the number of animals at different stages of infection, the sensitivity and specificity of each test, and the costs of testing and culling. Testing strategies included either milk or serum ELISA alone or with fecal culture in series. Model outputs included effectiveness (detection fraction, the proportion of truly infected animals in the herd that are successfully detected by the testing strategy), cost, and cost-effectiveness (testing cost per true positive detected, total cost per true positive detected). Several assumptions were made: MAP was introduced with a single animal and no management interventions were implemented to limit within-herd transmission of MAP before this test. In medium herds, between 7 and 26% of infected animals are detected at a single round of testing, the former using the milk ELISA and fecal culture in series 5 yr after MAP introduction and the latter using fecal culture alone 15 yr after MAP introduction. The combined costs of testing and culling at a single round of testing increases with time since introduction of MAP infection, with culling costs being much greater than testing costs. The cost-effectiveness of testing varied by testing strategy. It was also

  6. One-Step Multiplex RT-qPCR Assay for the Detection of Peste des petits ruminants virus, Capripoxvirus, Pasteurella multocida and Mycoplasma capricolum subspecies (ssp.) capripneumoniae

    Science.gov (United States)

    Lamien, Charles Euloge; Spergser, Joachim; Lelenta, Mamadou; Wade, Abel; Gelaye, Esayas; Loitsch, Angelika; Minoungou, Germaine; Thiaucourt, Francois; Diallo, Adama

    2016-01-01

    Respiratory infections, although showing common clinical symptoms like pneumonia, are caused by bacterial, viral or parasitic agents. These are often reported in sheep and goats populations and cause huge economic losses to the animal owners in developing countries. Detection of these diseases is routinely done using ELISA or microbiological methods which are being reinforced or replaced by molecular based detection methods including multiplex assays, where detection of different pathogens is carried out in a single reaction. In the present study, a one-step multiplex RT-qPCR assay was developed for simultaneous detection of Capripoxvirus (CaPV), Peste de petits ruminants virus (PPRV), Pasteurella multocida (PM) and Mycoplasma capricolum ssp. capripneumonia (Mccp) in pathological samples collected from small ruminants with respiratory disease symptoms. The test performed efficiently without any cross-amplification. The multiplex PCR efficiency was 98.31%, 95.48%, 102.77% and 91.46% whereas the singleplex efficiency was 93.43%, 98.82%, 102.55% and 92.0% for CaPV, PPRV, PM and Mccp, respectively. The correlation coefficient was greater than 0.99 for all the targets in both multiplex and singleplex. Based on cycle threshold values, intra and inter assay variability, ranged between the limits of 2%–4%, except for lower concentrations of Mccp. The detection limits at 95% confidence interval (CI) were 12, 163, 13 and 23 copies/reaction for CaPV, PPRV, PM and Mccp, respectively. The multiplex assay was able to detect CaPVs from all genotypes, PPRV from the four lineages, PM and Mccp without amplifying the other subspecies of mycoplasmas. The discriminating power of the assay was proven by accurate detection of the targeted pathogen (s) by screening 58 viral and bacterial isolates representing all four targeted pathogens. Furthermore, by screening 81 pathological samples collected from small ruminants showing respiratory disease symptoms, CaPV was detected in 17 samples

  7. Predicciones del crecimiento en poblaciones de pino laricio (Pinus nigra Arn. ssp. salzmannii bajo diferentes escenarios futuros de cambio climático

    Directory of Open Access Journals (Sweden)

    D. Candel-Pérez

    2012-01-01

    Full Text Available La disminución de las precipitaciones y el incremento de la temperatura registrados en las últimas décadas, junto con el aumento de la probabilidad de ocurrencia de eventos extremos de sequía, hacen muy probable una mayor vulnerabilidad de las poblaciones forestales mediterráneas. Sin embargo, el impacto de los diferentes escenarios climáticos previstos para el futuro sobre el crecimiento de las especies forestales ha sido poco desarrollado. Analizamos el patrón de crecimiento del pino laricio (Pinus nigra Arn. ssp salzmannii a lo largo de un gradiente altitudinal en la Serranía de Cuenca (este de la Península Ibérica. Estos datos, expresados como incremento de área basal, se usaron para ajustar modelos lineales mixtos de clima-crecimiento. A partir de estos modelos se realizó una predicción del crecimiento de los individuos en el futuro, usando como variables independientes los modelos de cambio climático CGCM2 y ECHAM4 y los escenarios de emisiones A2 y B2 del IPCC, disponibles a escala regional para el área de estudio. Hipotetizamos que las poblaciones situadas a menor altitud tendrán una menor tasa de crecimiento medio y serán las más vulnerables al aumento de la aridez climática. Los datos climáticos locales y regionales registrados durante el siglo XX, así como los modelos de clima futuro considerados (2011-2070, coinciden en mostrar una tendencia de calentamiento y un aumento de los episodios de sequía extrema. En las poblaciones de P. nigra situadas a menor altitud la tasa de crecimiento medio no fue inferior pero las correlaciones entre temperatura y crecimiento fueron siempre negativas y por tanto, los modelos predicen para estas poblaciones una drástica reducción del crecimiento y su virtual desaparición. Sin embargo, las poblaciones más envejecidas y las situadas en su límite superior altitudinal mostraron predicciones similares o ligeramente inferiores al crecimiento actual, a pesar de mostrar la menor

  8. Localisation of genes for resistance against ¤Blumeria graminis¤ f.sp. ¤hordei¤ and ¤Puccinia graminis¤ in a cross between a barley cultivar and a wild barley (¤Hordeum vulgare¤ ssp. ¤spontaneum¤) line

    DEFF Research Database (Denmark)

    Backes, G.; Madsen, L.H.; Jaiser, H.; Stougaard, J.; Herz, M.; Mohler, V.; Jahoor, A.

    2003-01-01

    The aims of this investigation have been to map new (quantitative) resistance genes against powdery mildew, caused by Blumeria graminis f.sp. hordei L., and leaf rust, caused by Puccinia hordei L., in a cross between the barley (Hordeum vulgare ssp. vulgare) cultivar "Vada" and the wild barley...

  9. Effects of Nitrogen Fertilizer with Nitrification Inhibitor DMPP (3,4-Dimethylpyrazole phosphate) on Nitrate Accumulation and Quality ofCabbage (Brassica campastris L. ssp. pekinesis)

    Institute of Scientific and Technical Information of China (English)

    XUChao; WULiang-huan; JUXiao-tang; ZHANGFu-suo

    2004-01-01

    To assess the effects of N fertilizer ammonium sulphate nitrate [ (NH4)2SO4 plus NH4NO3;ASN] with the new nitrification inhibitor (NI) 3, 4-dimethylpyrazole phosphate (DMPP) (ASN+DMPP) on yield, nitrate accumulation, and quality of cabbage (Brassica campastris L. ssp. pekinesis), two field trials were carried out under various soil-climatic conditions in Jinhua City and Xinchang County, Zhejiang Province of China in 2002.Results showed that DMPP could increase the mean yield by + 2.0 t ha-1 in Jinhua, +5.5 t ha-1 in Xinchang, decrease NO3--N content by -9.4% in Jinhua, -7.3% in Xinchang and improve nutritional quality by increasing vitamin C (VC), soluble sugar, K, Fe, Zn contents significantly.

  10. High resolution mass spectrometry imaging reveals the occurrence of phenylphenalenone-type compounds in red paracytic stomata and red epidermis tissue of Musa acuminata ssp. zebrina cv. 'Rowe Red'.

    Science.gov (United States)

    Hölscher, Dirk; Fuchser, Jens; Knop, Katrin; Menezes, Riya C; Buerkert, Andreas; Svatoš, Aleš; Schubert, Ulrich S; Schneider, Bernd

    2015-08-01

    The banana epidermis and in particular their stomata are conducive sites for the penetration of pathogenic fungi which can severely limit global banana production. The red pseudostem of the ornamental banana Musa acuminata ssp. zebrina cv. 'Rowe Red' was used to study the chemical constituents of the epidermal cell layer using matrix-free laser desorption/ionization Fourier transform ion cyclotron resonance mass spectrometric imaging (LDI-FT-ICR-MSI). The high resolution of this technique allowed phenylphenalenone-type compounds to be located in single plant cells. Some of these secondary metabolites were identified as constitutive compounds and found in specialized epidermal cells in banana pseudostem tissue. Especially the red paracytic stomata revealed higher signal intensities of certain phenylphenalenones than normal epidermis cells. The ease of detection of polycyclic aromatic compounds on the cellular level is discussed with regard to future investigations of plant-pathogen interactions. PMID:26004822

  11. Studies on the Characteristics of Linoleate Isomerase from P.freudenreichii ssp.shermanii and L.plantarum%费氏丙酸杆菌谢氏亚种和植物乳杆菌亚油酸异构酶结构及酶学性质

    Institute of Scientific and Technical Information of China (English)

    王丽敏; 吕加平; 段玉权; 刘鹭

    2009-01-01

    [Objective] The attributes of linoleate isomerases from both Propionibacteriu freudenreichii ssp.shermanii and Lactobacillu plantarum were studied to understand the different characters of linoleate isomerase originated from different strains.[Method] Dynamic and characteristic parameter such as Michaelis constant,molecular weight of linoleate isomerase with different origins were determined using the method of enzyme activity analysis and electrophoresis.The peptide mass fingerprints produced by P.freudenreichii ssp.shermanii and L.plantarum linoleate isomerase were studied by HPLC-ESI-MS system.[Result]The optimum pH for P.freudenreichii ssp.shermanii linoleate isomerase was 8.0 and the optimum temperature was about 30℃.The K_m and V_(max) of linoleic acid was 20.53 μmol·L~(-1) and 0.44 μg·ml~(-1) min-1.The optimum pH for L.plantarum linoleate isomerase was 7.5 and the optimum temperature was about 50℃. The K_m and V_(max) of linoleic acid was 17.85 μmol·L~(-1) and 0.73μ·ml~(-1)·min~(-1),respectively,Molecular structure of linoleate isomerase produced by P.freudenreichii ssp.shermanii and L.plantarum showed some extent homogeny on sequences.[Conclusion]The linoleate isomerase originated from the two strains has different attributes.The sequences of both linoleate isomerases have some extent homogeny and the characteristic parameters of experimental linoleate isomerase are different from those of reported.%[目的]对来源于植物乳杆菌(Lactobacillu plantarum)和费氏丙酸杆菌谢氏亚种(Propionibacteriu freudenreichii ssp.shermanii)亚油酸异构酶酶学特性开展研究,探讨不同来源的亚油酸异构酶酶学性质存在的差异.[方法]通过酶反应动力学方法及电泳技术测定了酶的最适反应条件、米氏常数、酶的分子量,并在此基础上,采用高效液相色谱(HPLC)与电喷雾离子化/质谱(ESI-MS)相结合的方法测定了L.plantarum和P.freudcnreichii ssp.shermanii亚油酸异构酶

  12. PCR-SSP法检测人胰腺癌细胞株PCNA-1的K-ras基因点突变的方式%Detection of K-ras Gene Point Mutation's Style in Human Pancreatic Cancer Cell Line PANC-1 by PCR-SSP

    Institute of Scientific and Technical Information of China (English)

    王伟; 王春友; 董继华; 赵刚; 陈雄; 张敏

    2006-01-01

    Objective: To detect the style of K-ras gene point mutation in human pancreatic cancer cell line PANC-1 and decide the bp sequence of Ras target position interfered by RNA. Methods: Three kinds of special sequence primers (SSP) for polymerase chain reaction (PCR) with regard to the mutation styles (GAT, CGT and GGT) at codon 12 of K-fas were used to study the human pancreatic cancer cell line PANC-1. The amplification products were studied with polyacrylamine gel electrophoresis to detect the style of point mutation. Results: The style of K-ras gene point mutation at codon 12 was GAT in human pancreatic cancer cell line. Conclusion: PCR-SSP is rapid, convenient and high specific. The results provide a basis for further gene therapy by RNA interference for pancreatic cancer.

  13. Avaliação da qualidade de caldo de cana envasado a quente e por sistema asséptico Quality of sugarcane (Sacharum ssp. juice packed by hot fill and aseptic processes

    Directory of Open Access Journals (Sweden)

    Karin Samorano da Silva

    2006-12-01

    Full Text Available Dois processos térmicos foram aplicados ao caldo de cana com o objetivo de se obter um produto estável à temperatura ambiente. A variedade de cana de açúcar (Sacharum ssp. utilizada foi a RB72 - 454. A metodologia de planejamento fatorial foi aplicada a fim de se verificar a melhor combinação entre acidez (pH e doçura (°Brix. Houve uma tendência para melhor aceitação sensorial quando o pH foi maior que 4,0 e °Brix maior que 15. Primeiramente, o caldo foi submetido a 141 °C /10 s e envasado assepticamente em garrafas de vidro previamente esterilizadas. No segundo processo, o caldo foi submetido ao tratamento térmico a 110 °C /10 s e envasado a quente (90 ± 5 °C em garrafas de vidro. Análises físico-químicas, microbiológicas e sensoriais foram realizadas durante a estocagem dos lotes à temperatura ambiente. O lote processado assepticamente apresentou vida útil de 30 dias e o envasado a quente, 60 dias, não apresentando diferença estatística (p The objective of this work is to evaluate two thermal processes in order to obtain sugarcane (Sacharum ssp. juice stable at room temperature in glass bottles. An experimental methodology was applied to obtain the best combination between pH and °Brix based on the sensory results. There was a tendency for a better sensory acceptance for pH > 4.0 and °Brix > 15. Two thermal processes were applied to sterilize the juice. Firstly, the juice was submitted to 141 °C /10 s, and then aseptically filled in glass bottles previously sterilized. In the second process, the juice was submitted to 110 °C /10 s and filled into glass bottles at 90 ± 5 °C. Physical-chemical changes, microbiological counts and sensory acceptance were evaluated during the storage at room temperature. The shelf life of aseptically processed juice was 30 days and 60 days for the hot filled juice based on the sensory evaluation. These results indicated that the hot fill process was more efficient for sugarcane

  14. Studiesy on Geographic Divergence of Lagenaria siceraria ssp.asiatica Based on 5.8S rDNA and ITS Sequence Data%基于5.8SrDNA和ITS序列探讨亚洲瓠瓜的地理分化

    Institute of Scientific and Technical Information of China (English)

    周先治; 陈阳; 陈晟; 吴宇芬; 赵依杰

    2011-01-01

    The geographic divergence of the Lagenaria siceraria ssp. asiatica were examined using ITS1+5.8S rDNA+ITS2 sequences data. The sequences were obtained from 23 species of L. siceraria ssp. asiatica from China, Thailand and Japan. The results showed that within L. siceraria ssp. asiatica, ITS1+5.8S rDNA+ITS2 was 611-627 bp, the G+C content of the sequences was 54.17 %-63.26 %, 65 informative sites ( 11.09 % ) within L. siceraria ssp. asiatica are found in the ITS1+5.8S rDNA+ITS2 sequences. The length of the ITS1+5.8S rDNA+ITS2 sequences of 2 species from Japan is shorter than the other 21 species from China and Thailand, the G+C content of the sequences of the 2 species from Japan is lower than those from China and Thailand. Finally we constructed the strict consensus tree of 23 species of L. siceraria ssp. asiatica indicated that L. siceraria ssp. asiatica has two main prophylactic glades, one including 2 species from Japan, and the other including 20 species from China and 1 species from Thailand. The bootstrap value is 99 %. Test of the homogeneity of substitution patterns revealed that the species of L. siceraria ssp. asiatica from Japan are significantly different from those from China and Thailand.%基于5.8SrDNA及ITS序列对23份来自中国、泰国和日本的亚洲瓠瓜品种进行了地理分化研究.结果发现,23份瓠瓜材料的ITS1+5.8SrDNA+ITS2序列的长度在611~627 bp之间,G+C含量在54.17%~63.26%之间,信息位点数65个,占总碱基数的11.09%;源自日本的2份瓠瓜品种的序列长度短于其他21份瓠瓜品种,G+C含量也明显低于其他瓠瓜品种.从5.8SrDNA及ITS序列构建的系统树可以看出,源自日本的瓠瓜品种与源自中国和泰国的瓠瓜品种存在地理分化现象,分属于不同的分支,支持率达到99%.序列间的同质性检验结果显示,2份源自日本的瓠瓜品种与源自中国和泰国的瓠瓜品种差异显著.

  15. Scientific Opinion on the safety assessment of the process LPR based on EREMA Advanced and Colortronic SSP ® technology used to recycle post-consumer PET into food contact materials

    Directory of Open Access Journals (Sweden)

    EFSA Panel on Food Contact Materials, Enzymes, Flavourings and Processing Aids (CEF

    2014-02-01

    Full Text Available This scientific opinion of the EFSA Panel on Food Contact Materials, Enzymes, Flavourings and Processing Aids deals with the safety assessment of the recycling process LPR (EU register No RECYC061 which is based on the EREMA advanced and Colortronic SSP ® technologies. The input to the process is hot caustic washed and dried PET flakes originating from collected post-consumer PET bottles and containing no more than 5 % of PET from non-food consumer applications. In this process, washed and dried PET flakes are heated successively in two continuous reactors under vacuum before being extruded into pellets. After extrusion they are crystallised and solid state polymerized. Having examined the results of the challenge test provided, the Panel concluded that the four steps, the decontamination in two continuous reactors, extrusion, crystallisation and solid state polymerization are the critical steps that determine the decontamination efficiency of the process. The operating parameters to control the performance of these critical steps are temperature, pressure, gas flow and residence time. Under these conditions, it was demonstrated that the recycling process is able to ensure that the level of migration of potential unknown contaminants into food is below the modelled migration of 0.1 μg/kg food derived from exposure scenario for infants and 0.15 μg/kg food derived from the exposure scenario for toddlers. The Panel concluded that recycled PET obtained from LPR process is not of safety concern when used to manufacture articles intended for food contact materials applications in compliance with the conditions as specified in the conclusion of the opinion.

  16. The establishment of an in vitro gene bank in Dianthus spiculifolius Schur and D. glacialis ssp. gelidus (Schott Nym. et Kotschy Tutin: I. The initiation of a tissue collection and the characterization of the cultures in minimal growth conditions

    Directory of Open Access Journals (Sweden)

    Mihaela Holobiuc

    2009-12-01

    Full Text Available In the last decades the plants have to cope with the warming of the climate. As a consequence of this process more than half of the plant species could become vulnerable or threatened until 2080. Romania has a high plant diversity, with endemic and endangered plant species, the measures of biodiversity conservation being necessary. The integrated approach of biodiversity conservation involves both in situ and ex situ strategies. Among ex situ methods of conservation, besides the traditional ones (including field and botanic collection and seed banks, in vitro tissues techniques offer a viable alternative. The germplasm collections can efficiently preserve the species (of economic, scientific and conservative importance, in the same time being a source of plant material for international exchanges and for reintroduction in the native habitats.The "in vitro gene banking" term refers to in vitro tissues cultures from many accessions of a target species and involves the collection of plant material from field or from native habitats, the elaboration of sterilization, micropropagation and maintaining protocols. These collections have to be maintained in optimal conditions, morphologically and genetically characterized. The aim of our work was to characterize the response of the plant material to the minimal in vitro growth protocol for medium-term cultures achievement as a prerequisite condition for an active gene bank establishment in two rare Caryophyllaceae taxa: Dianthus spiculifolius and D. glacialis ssp. gelidus. Among different factors previously tested for medium-term preservation in Dianthus genus, mannitol proved to be more efficient for minimal cultures achievement. In vitro, the cultures were evaluated concerning their growth, regenerability and enzyme activity (POX, SOD, CAT as a response to the preservation conditions in the incipient phase of the initiation of the in vitro collection. The two species considered in this study showed a

  17. The cell density-dependent expression of stewartan exopolysaccharide in Pantoea stewartii ssp. stewartii is a function of EsaR-mediated repression of the rcsA gene.

    Science.gov (United States)

    Minogue, Timothy D; Carlier, Aurelien L; Koutsoudis, Maria D; von Bodman, Susanne B

    2005-04-01

    The LuxR-type quorum-sensing transcription factor EsaR functions as a repressor of exopolysaccharide (EPS) synthesis in the phytopathogenic bacterium Pantoea stewartii ssp. stewartii. The cell density-dependent expression of EPS is critical for Stewart's wilt disease development. Strains deficient in the synthesis of a diffusible acyl-homoserine lactone inducer remain repressed for EPS synthesis and are consequently avirulent. In contrast, disruption of the esaR gene leads to hypermucoidy and attenuated disease development. Ligand-free EsaR functions as a negative autoregulator of the esaR gene and responds to exogenous acyl-homoserine lactone for derepression. The focus of this study was to define the mechanism by which EsaR governs the expression of the cps locus, which encodes functions required for stewartan EPS synthesis and membrane translocation. Genetic and biochemical studies show that EsaR directly represses the transcription of the rcsA gene. RcsA encodes an essential coactivator for RcsA/RcsB-mediated transcriptional activation of cps genes. In vitro assays identify an EsaR DNA binding site within the rcsA promoter that is reasonably well conserved with the previously described esaR box. We also describe that RcsA positively controls its own expression. Interestingly, promoter proximal genes within the cps cluster are significantly more acyl-homoserine lactone responsive than genes located towards the middle or 3' end of the gene cluster. We will discuss a possible role of EsaR-mediated quorum sensing in the differential expression of the cps operon. PMID:15773989

  18. Circular dichroism and fluorescence spectroscopy of cysteinyl-tRNA synthetase from Halobacterium salinarum ssp. NRC-1 demonstrates that group I cations are particularly effective in providing structure and stability to this halophilic protein.

    Directory of Open Access Journals (Sweden)

    Christopher J Reed

    Full Text Available Proteins from extremophiles have the ability to fold and remain stable in their extreme environment. Here, we investigate the presence of this effect in the cysteinyl-tRNA synthetase from Halobacterium salinarum ssp. NRC-1 (NRC-1, which was used as a model halophilic protein. The effects of salt on the structure and stability of NRC-1 and of E. coli CysRS were investigated through far-UV circular dichroism (CD spectroscopy, fluorescence spectroscopy, and thermal denaturation melts. The CD of NRC-1 CysRS was examined in different group I and group II chloride salts to examine the effects of the metal ions. Potassium was observed to have the strongest effect on NRC-1 CysRS structure, with the other group I salts having reduced strength. The group II salts had little effect on the protein. This suggests that the halophilic adaptations in this protein are mediated by potassium. CD and fluorescence spectra showed structural changes taking place in NRC-1 CysRS over the concentration range of 0-3 M KCl, while the structure of E. coli CysRS was relatively unaffected. Salt was also shown to increase the thermal stability of NRC-1 CysRS since the melt temperature of the CysRS from NRC-1 was increased in the presence of high salt, whereas the E. coli enzyme showed a decrease. By characterizing these interactions, this study not only explains the stability of halophilic proteins in extremes of salt, but also helps us to understand why and how group I salts stabilize proteins in general.

  19. Determination of HLA-B27 subtypes in patients with ankylosing spondylitis by PCR-SSP%采用PCR-SSP方法检测强直性脊柱炎患者HLA-B27亚型

    Institute of Scientific and Technical Information of China (English)

    韩军艳; 熊平; 严鹏; 邵诗颖; 熊蓓; 吴雄文; 龚非力

    2003-01-01

    目的建立序列特异性引物-聚合酶链方法(PCR-SSP)检测湖北地区人白细胞抗原B27(Human leucocyte antigen-B27, HLA-B27)阳性强直性脊柱炎患者的HLA-B27亚型组成.方法盐析法提取100例HLA-B27阳性的强直性脊柱炎患者外周血基因组DNA,采用PCR-SSP技术分别进行HLA-B位点基因型检测和HLA-B27基因亚型分析.结果 100例标本PCR-SSP扩增均获成功,历时3 h.共检出4种亚型:HLA-B*2704、HLA-B*2711、HLA-B*2715、HLA-B*2722.其中HLA-B*2704纯合子25例、HLA-B*2704杂合子63例;HLA-B*2711杂合子5例;HLA-B*2715杂合子6例;HLA-B*2722杂合子1例.四种亚型所占构成比分别为90.4%、4%、4.8%和0.8%.结论 PCR-SSP方法进行HLA-B27亚型分析,快速、经济、简单;HLA-B*2704是湖北地区强直性脊柱炎患者HLA-B27基因主要亚型.

  20. The establishment of an in vitro gene bank in Dianthus spiculifolius Schur and D. glacialis ssp. gelidus (Schott Nym. et Kotschy Tutin: I. The initiation of a tissue collection and the characterization of the cultures in minimal growth conditions

    Directory of Open Access Journals (Sweden)

    Mihaela Holobiuc

    2009-11-01

    Full Text Available In the last decades the plants have to cope with the warming of the climate. As a consequence of this process more than half of the plant species could become vulnerable or threatened until 2080. Romania has a high plant diversity, with endemic and endangered plant species, the measures of biodiversity conservation being necessary. The integrated approach of biodiversity conservation involves bothin situ and ex situ strategies. Among ex situ methods of conservation, besides the traditional ones (including field and botanic collection and seed banks, in vitro tissues techniques offer a viable alternative. The germplasm collections can efficiently preserve the species (of economic, scientific and conservative importance, in the same time being a source of plant material for international exchanges and for reintroduction in the native habitats.The "in vitro gene banking" term refers to in vitro tissuescultures from many accessions of a target species and involves the collection of plant material from field or from native habitats, the elaboration of sterilization, micropropagation and maintaining protocols. These collections have to be maintained in optimal conditions, morphologically and genetically characterized. The aim of our work was to characterize the response of the plant material to the minimal in vitro growth protocol for medium-term cultures achievement as a prerequisite condition for an active gene bank establishment in two rare Caryophyllaceae taxa: Dianthus spiculifolius and D. glacialis ssp. gelidus. Among different factors previously tested for medium-term preservation in Dianthus genus, mannitol proved to be more efficient for minimal cultures achievement. In vitro, the cultures were evaluated concerning their growth, regenerability and enzyme activity (POX, SOD, CAT as a response to the preservation conditions in the incipient phase of the initiation of the in vitro collection. The two species considered in this study showed a

  1. Obtención de ácido láctico por fermentación de almidón de ñame espino mediante el Lactobacillus delbrueckii ssp. bulgaricus y el Streptococcus thermophilus para su uso en la producción de ácido poliláctico

    OpenAIRE

    Tejada Tovar, Ronald Eduardo

    2015-01-01

    Resumen: El propósito del presente trabajo fue evaluar la producción de ácido láctico obtenido por la fermentación del almidón de ñame espino Discorea rotundata mediante la acción de la mezcla de Lactobacillus delbrueckii ssp. bulgaricus y el Streptococcus thermophilus, para su posible uso en la obtención de APL; estableciendo el proceso de obtención y caracterizando el producto obtenido mediante análisis de sus propiedades fisicoquímicas y funcionales; a este se le realizó un seguimiento med...

  2. Susceptibility of pathogenic and nonpathogenic Naegleria ssp

    Energy Technology Data Exchange (ETDEWEB)

    Whiteman, L.Y.

    1988-01-01

    The susceptibility of four species of Naegleria amoebae to complement-mediated lysis was determined. The amoebicidal activity of normal human serum (NHS) and normal guinea pig serum (NGPS) for Naegleria amoebae was measured by an in vitro cytotoxicity assay. Release of radioactivity from amoebae labeled with {sup 3}H-uridine and visual observation with a compound microscope were used as indices of lysis. Susceptibility or resistance to complement-mediated lysis in vitro correlated with the in vivo pathogenic potential. Nonpathogenic Naegleria amoebae were lysed at a faster rate and at higher cell concentrations than were pathogenic amoebae. Electrophoretic analysis of NHS incubated with pathogenic or nonpathogenic Naegleria spp. demonstrated that amoebae activate the complement cascade resulting in the production of C3 and C5 complement cleavage products. Treatment with papain or trypsin for 1 h, but not with sialidase, increase the susceptibility of highly pathogenic, mouse-passaged N. fowleri to lysis. Treatment with actinomycin D, cycloheximide or various protease inhibitors for 4 h did not increase susceptibility to lysis. Neither a repair process involving de novo protein synthesis nor a complement-inactivating protease appear to account for the increase resistance of N. fowleri amoebae to complement-mediated lysis. A binding study with {sup 125}I radiolabeled C9 indicated that the terminal complement component does not remain stably bound to the membrane of pathogenic amoebae.

  3. Sugar Beet (Beta vulgaris L. ssp. vulgaris)

    Science.gov (United States)

    Sugar beet is widely grown, however high profitability requires proper land selection and management. This chapter describes the characteristics of sugar beet and reviews its land and soil management, including cultivation techniques, crop rotation, soil tillage, planting and seedbed preparation, di...

  4. Morphological Diversity Analysis of Red-seed Watermelon (Citrullus lanatus ssp.vulgaris var.megalaspermus Lin et Chao) Germplasm Resources%红籽瓜种质资源形态学多样性分析

    Institute of Scientific and Technical Information of China (English)

    柳唐镜; 张棵; 吴素萍

    2013-01-01

    This study aimed to analyze the morphological diversity of redseed watermelon (Citrullus /anatus ssp.vulgaris var.megalaspermus Lin et Chao)germplasm resources.[Method] Multiple cluster analysis and principal components analysis on the morphological traits of 51 red-seed watermelon germplasm resources were carried out.[Result] The coefficient of variations (CVs) of 39 morphological traits in 51 red-seed watermelon idioplasm resources ranged from 5.37% to 66.95%,with an average of 22.87%.The average of Shannon diversity information indices was 1.55.Among them,the Shannon diversity information index of seed length was the highest (2.16) and that of seed shell figure pattern was the lowest (0.32).In addition,the morphological diversity information indices of quantity characters were higher than that of quality characters.The principal components analysis revealed that the variance contribution rates of the first,second and third principal components were 19.49%,15.32% and 9.55%,respectively.Cluster analysis divided the 51materials into three broad branches based on the morphological traits.There was only one material in the fist branch and two in the second branch,and all the three materials were wild.The other 48 materials were divided into the third branch and all of them were cultivars.[Conclusion] This study provided a theoretical basis for the protection and utilization of red-seed watermelon resources.%[目的]旨在分析红籽瓜种质资源形态学多样性.[方法]对51份红籽瓜种质资源形态学性状进行聚类分析和主成分分析.[结果]红籽瓜种质资源39个形态性状变异系数为5.37%~66.95%,平均变异系数为22.87%.Shannon多样性信息指数平均值为1.55,种子长度Shannon多样性信息指数最高,为2.16;种皮覆纹最低,为0.32,数量性状多样性信息指数大于质量性状.通过主成分分析,第一主成分方差贡献率为19.49%,第二主成分方差贡献率为15.32%;第三

  5. 大白菜BrTCP24基因的克隆与功能分析%Cloning and Functional Analysis of BrTCP24 Gene in Chinese Cabbage (Brassica rapa L.ssp.pekinensis)

    Institute of Scientific and Technical Information of China (English)

    王凤德; 谭婷婷; 张一卉; 李景娟; 李化银; 李利斌; 刘立锋; 高建伟

    2013-01-01

    It is very important to isolate and characterize the genes responsible for negative control of the leaf heading growth of Chinese cabbage,which can be help to speed up breeding progress of the small heading Chinese cabbage varieties that meet the current market demands.Here,a full-length TCP cDNA named BrTCP24,which belongs to the second subgroups of TCP domain family,was isolated from leaves of Chinese cabbage inbred line Fushanbaotou (Brassica rapa L.ssp.pekinensis).The full-length cDNA of BrTCP24 consisted of 1 221 nucleotides,and was predicted to code a 406-amino acid polypeptide.In addition,there were no introns in BrTCP24 gene.The phylogenetic analysis about BrTCP24 and TCP families in Arabidopsis was carried out using the software of MEGA4.0.The result indicated that BrTCP24 gene and Arabidopsis AtTCP3 gene would belong to the same branch,which suggested they had closely genetic relationship.The alignment of predicted amino acid sequences of BrTCP24 and Arabidopsis AtTCP3 indicated that there was 55.15% identity between them.Additionally,these two proteins contained conserved TCP domain and had 91.53% identity in this domain.These results suggested that BrTCP24 and Arabidopsis AtTCP3 would have similar biological functions.The semiquantitive RT-PCR indicated that BrTCP24 gene was expressed in roots,dwarf stems,rosette leaves,folding leaves,flowers,siliques and bud flowers examined in Chinese cabbage.Among them,rosette leaves had the highest mRNA level,followed by roots,folding leaves,flowers,siliques and bud flowers,while dwarf stems had the lowest mRNA level.Interestingly,the expression level of BrTCP24 didn't effect by 5 μmol NAA treatment in 12 h period.To test the function of BrTCP24,we then engineered Arabidopsis plants that would over-express BrTCP24 ectopically,driven by CaMV 35S promoter,and obtained 17 transgenic lines by Kanamycin and PCR screening.Using RT-PCR method,we randomly detected 5 transgenic lines and found all of them could express

  6. Morphological Studies on the Development of Anther of Three Ogura Cytoplasmic Male Sterile Lines and Their Maintainer Lines of Brassica rapa L.ssp.%大白菜Ogura雄性不育系及保持系花药发育的细胞学观察

    Institute of Scientific and Technical Information of China (English)

    王书强; 刘俊英; 崔辉梅

    2011-01-01

    [Objective]The development of anther microspore of three Ogura cytoplasmic male sterile (CMS) lines and their maintainer lines of Brassica rapa L.ssp. pekinensis were studied.[Method]The development of anther of three Ogura cytoplasmic male sterile (CMS) lines and their maintainer lines of Brassica rapa L.ssp.pekinensis were observed from the perspective of cytology.【Result]Microspore abortion of three Ogura CMS lines (OBY, OBK, OD5) have occurred in mononuclear microspore early, and anthers have aborted entirely before blossom.[Conclusion] Tapetum cell of three Ogura CMS lines formed vacuoles is earlier than their maintainer lines. Tapetum cell of three Ogura CMS lines has been degenerating at microsporocyte meiosis stage, and tapetum cell of their maintainer lines degenerated naturally, providing nutrients and space for microsporogenesis.%[目的]研究3个大白菜Ogura雄性不育系及保持系花药小抱子发育过程.[方法]对3对大白菜Ogura雄性不育系及其保持系花药发育进行细胞学观察.[结果]3个大白菜Ogura雄性不育系(OBY,OBK,OD5)的小孢子败育均发生在单核早期,在开花前完全败育.[结论]不育系绒毡层液泡化早于保持系,花粉母细胞减数分裂时不育系绒毡层细胞已开始退化,而保持系(BY,BK,D5)绒毡层自然解体,供给小孢子发育所需的营养物质和发育空间.

  7. Allometries for Widely Spaced Populus ssp. and Betula ssp. in Nurse Crop Systems

    Directory of Open Access Journals (Sweden)

    Hendrik Stark

    2013-11-01

    Full Text Available Nurse crops of widely spaced pioneer trees are a silvicultural approach to protect the regeneration of frost sensitive target tree species. If overstorey nurse crops are harvested, they can provide additional short-term benefits through increased biomass production, e.g., for bioenergy. However, the intensification of biomass exports from forests might impact negatively on ecosystem nutrient pools. Thus, precise allometric biomass equations are required to quantify biomass and nutrient removals. Since an analysis of published allometric equations developed for typical, dense aspen or birch forests showed that the tree height-to-diameter ratio correlated positively and the proportion of branch biomass negatively with stand density, we developed new allometric biomass equations for widely spaced aspen and birch growing at 4 x 4 m spacing. These equations yielded a root mean squared error of 13% when predicting total aboveground woody biomass for our sample trees. In contrast, the corresponding root mean squared error produced by allometric biomass equations from the literature ranged between 17% to 106% of actual dry biomass. Our results show that specific allometric biomass equations are needed for widely spaced pioneer trees both for accurate estimates of biomass and the nutrients contained within.

  8. Cloning by 3′-RACE and Expression of BrMYB34-3 Gene from Brassica rapa ssp.pekinensis%大白菜BrMYB34-3基因的3′-RACE克隆及表达

    Institute of Scientific and Technical Information of China (English)

    国静; 刘庆霞; 李梦莎; 张耀伟; 阎秀峰

    2011-01-01

    以大白菜叶片为材料,根据NCBI数据库中BrMYB34-3基因序列的已知信息,利用3-RACE获得了BrMYB34-3基因全长,用RT-PCR方法对BrMYB34-3在不同组织中的表达进行分析.结果显示,该基因全长1 135 bp,编码280个氨基酸.BrMYB34-3具有R2R3-MYB(含有2个MYB结构域的转录因子)典型的R2、R3结构域及基序.其氨基酸序列与大白菜的BrMYB34-1和BrMYB34-2、拟南芥的AtMYB34具有较高的一致性.BrMYB34-3在莲座叶、当天开的花中表达水平较高,在花序顶端表达水平较低,在根和花序轴中未检测到表达,这与拟南芥AtMYB34的表达模式不同.研究表明,BrMYB34-3是大白菜中的MYB34同源基因,在功能上可能与拟南芥AtMYB34基因存在差异.%An R2R3-MYB gene,BrMYB34-3, was isolated from the leaves of Brassica rapa ssp. pekinensis by 3′-RACE techniques based on the partial sequence in NCBI database. The full length of BrMYB34-3 cDNA was 1 135 bp,encoding 280 amino acids. The deduced amino acid sequence contained the conserved R2 and R3 domains near the N-terminus and a conserved motif which is the characteristic of R2R3-MYB transcription factor. Phylogenetic analysis revealed that BrMYB34-3 was clustered with BrMYB34-1 and BrMYB34-2 from Brassica rapa ssp. pekinensis and AtMYB34 from Arabidopsis thaliana. Expression analysis by RT-PCR showed that BrMYB34-3 was highly expressed in rosette leaves and flowers and lowly expressed in the tip of inflorescences,but not expressed in the roots and the inflorescence stems, which is different from the expression pattern of AtMYB34 in Arabidopsis thaliana. These results indicate that BrMYB34-3 is a homologous gene of MYB34 in Brassica rapa ssp. pekinensis,and it might have at least partial different functions with Arabidopsis AtMYB34.

  9. cDNA Cloning and mRNA Expression of Photomorphogenic Negative Regulator COP1 in ‘Tsuda' Turnip (Brassica rapa L.ssp.rapifera)%‘津田’芜菁光形态建成抑制因子COP1蛋白cDNA的克隆及表达分析

    Institute of Scientific and Technical Information of China (English)

    孙梅; 周波; 王宇; 刘明雪; 安春鹏; 李玉花

    2013-01-01

    The COP1 gene (BrCOP1, accession number JF738111) was isolated from total RNA of Brassica rapa L. ssp. rapifera 'Tsuda' by RT-PCR and RACE. BrCOP1 cDNA contained an opening reading frame of 2 034 bp, encoding a predicted protein of 677 amino acid residues. The deduced amino acid sequence of BrCOP1 shared 94% identity with Arabidopsis thaliana COP1. Northern blotting results demonstrated that expression of BrCOP1 exhibited no tissue specificity, and had no obvious difference in seedlings under various treatments but was induced by UV-A light, while the expression of BrCOP1 was induced after exposed to UV-A for 6 hours in the swollen hypocotyls, however expression level was not increased with the prolongation of time. The above results suggested that BrCOP1, as a key factor of light-dependent development, might play a crucial role in UV-A induced anthocyanin biosynthesis and light signal transduction.%通过RT-PCR和RACE的方法得到了编码‘津田'芜菁(Brassica rapa L.ssp.rapifera‘Tsuda’)BrCOP1的cDNA序列,长2 034 bp,编码677个氨基酸,与拟南芥同源性达94%,命名为BrCOP1,GeneBank收录号为JF738111.Northern杂交分析表明BrCOP1的表达没有组织特异性,而在整株幼苗及成熟植株肉质根表皮中受长波紫外线(UV-A)诱导表达,但成熟植株的直根表皮中表达量不随处理时间延长而增加.这暗示BrCOP1作为光控发育的重要调控因子,可能在UV-A诱导‘津田’芜菁花青素合成及光信号转导中起重要作用.

  10. 唾液链球菌嗜热亚种Y-2产谷氨酸脱羧酶的影响因子确立%Ascertainment of Factors Affecting Glutamate Decarboxylase Production by Streptococcus Salivarius ssp.thermophilus Y-2

    Institute of Scientific and Technical Information of China (English)

    杨胜远; 陆兆新; 余勃; 林谦; 焦阳; 别小妹; 吕凤霞

    2008-01-01

    从产酶和细胞生长较好的MRS培养基出发,对Streptococcus salivarius ssp.thermophilus Y-2产谷氨酸脱羧酶(glutamate decarboxylase,GAD)的影响因子进行探讨,结果当培养基组成和培养条件为蛋白胨15g/L、牛肉膏12.5g/L、蔗糖12.5g/L、柠檬酸二铵2.0g/L、乙酸钠5.0g/L、K2HPO4 2.0g/L、CaCl2 2.0 g/L、Tween 80 1.0ml、pH7.0、接种量2%(V/V)、发酵温度37℃、发酵时间12h时,较有利于菌株Y-2产GAD.Plackett-Burman设计法研究表明培养基初始pH值和K2HPO4为影响菌株Y-2产GAD的主要影响因素.经对菌株Y-2产GAD影响因素的筛选,新获得的培养基在组成上与MRS培养基相比已发生显著变化,GAD活力提高了1.3倍.

  11. Clonging of BrcCUC3 from Brassica rapa ssp.chinensis and Its Effect on Leaf Morphology and Inflorescence Structure%白菜NAC转录因子BrcCUC3基因克隆及其对叶缘和主枝发育的影响

    Institute of Scientific and Technical Information of China (English)

    惠麦侠; 张鲁刚; 余祥; 王晗; 白金娟; 何玉科

    2012-01-01

    植物NAC (矮牵牛NAM基因、拟南芥ATAF1/2和CUC2基因)转录因子CUP-SHAPED COTYLEDON(CUC)亚家族成员在植物茎尖分生组织形态建成、器官边界分离、叶发育方面发挥着重要作用.采用基因同源克隆的方法获得了白菜(Brassica rapa ssp.chinensis)基因BrcCUC3,并转化拟南芥(Arabidopsis thaliana)做了初步的功能鉴定.研究结果表明,白菜Brc CUC3的编码区长1 008 bp,编码335个氨基酸,基因结构分析显示BrcCUC3包含3个外显子、2个内含子,内含子剪接位点符合GT-AG规则.氨基酸序列分析表明,BrcCUC3蛋白具有典型的植物NAC domain结构域.BrcCUC3编码区氨基酸序列与其它植物的CUC3蛋白有很高的一致性,尤其与甘蓝(Brasica oleracea)、萝卜(Raphanus sativus)和拟南芥CUC3蛋白高度一致,一致性分别达到98%,97%和83%.在不同物种CUC3的系统进化树上,BrcCUC3归属于双子叶植物分支的十字花科亚组,由不同植物20条CUC3编码区氨基酸序列所建立的系统进化树与真实的植物进化基本一致.荧光定量PCR分析结果表明,BrcCUC3在白菜叶深裂株系叶片中的表达量比叶全缘叶片中的高.利用根癌农杆菌(A grobacterium tumefaciens)浸花法转化拟南芥,获得了转BrcCUC3基因的拟南芥植株.过表达BrcCUC3的转基因拟南芥呈现叶缘出现裂刻、主枝增加的新表型.初步说明该基因参与叶形和主枝的发育调控,为揭示白菜叶形发育分子调控机制和通过基因工程创制植物叶形新种质提供分子依据.%CUP-SHAPED COTYLEDON(CUC), members of the NAC family of transcription factors (such as NAM in Petunia hybrida, ATAF1/2 and CUC2 in Arabidopsis lhaliana) play an important role in shoot apical meristem (SAM) construction, organ separation and leaf development. BrcCUC3 was cloned from the non-heading Chinese cabbag (Brassica rapa ssp. chinensis) by the method of homologous sequence amplification and transformed into Arabidopsis thcdiana

  12. Development of Simple Sequence Repeat (SSR) and Insertion/Deletion (InDel) Markers in Chinese Cabbage (Brassica rapa ssp.pekinesis) and Analysis of Their Transferability%大白菜简单序列重复(SSR)和插入/缺失(InDel)标记的开发及通用性分析

    Institute of Scientific and Technical Information of China (English)

    仪泽会; 卢有飞; 郭晓芹; 惠麦侠; 张鲁刚; 张明科

    2012-01-01

    为探讨大白菜基因组序列中SSR位点的分布规律并开发SSR引物,利用SSRHunter软件对大白菜A10(16899818~17299817)的DNA序列进行简单序列重复(SSR)位点查找,共得到394个SSRs,平均每1.02 kb出现1个SSR.二核苷酸和三核苷酸重复是最主要的SSR类型,分别占79.44%和18.78%.为了提高SSR标记开发的准确性和通用性,对检索得到的含SSR位点的序列进行了同源比对,选取符合条件的15条SSR序列并设计引物;依据Blast过程中发现的在SSR位点不存在差异而在其侧翼序列中存在插入/缺失(InDel)差异的序列,设计了19条InDel引物.用34对SSR及InDel引物在6个大白菜(Brassica rapa ssp.pekinesis)材料中进行多态性研究,发现28对引物能扩增出理想的PCR产物,有效扩增率为82.35%,其中27对引物具有多态性,多态性比率为79.41%.为验证SSR引物的真实性,随机对4对SSR引物的部分白菜扩增片段进行了测序,发现100%的片段具有相应的SSR位点.28对SSR和InDel引物在甘蓝(B.oleracea)、油菜(B.napus)和萝卜(Raphanus sativus)品种的有效扩增率分别为85.71%、100%和77.78%,说明新开发的SSR和InDel标记具有较好的多态性和通用性.利用6对引物分析了48份十字花科种质的遗传多样性,结果表明48份材料被明显地区分成白菜和甘蓝组、萝卜组、油菜组3大类群,与传统分类一致.大白菜SSR和InDel标记的开发对于十字花科种质亲缘关系及遗传多样性分析具有重要的应用价值.%In order to analyze the SSR distribution in genomic sequence of Brassica rapa and develop new SSR markers, the DNA sequences of Chinese cabbage A10 (16899818~17299817) were screened using SSRHunter software and 394 Simple sequence repeats (SSRs) were mined with an average distance of 1.02 kb. Dinucleotide and trin ucleotide repeat SSRs were the dominant types, accounting for 79.44% and 18.78%, respectively, of the SSR obtained. In order to

  13. Efecto del hidrogel sobre el rendimiento de semilla en tres cultivares de Brachiaria spp en el valle de Iguala, gro., México (Efect of hidrogel on yield of seed of three cultivars of Brachiaria ssp in the valley of Iguala guerrero, México

    Directory of Open Access Journals (Sweden)

    Bartolo Hernández Santana

    2007-09-01

    Full Text Available ResumenBajo un diseño de bloques completamente al azar en un arreglo de parcelas divididas, se evaluó el efecto de tres niveles de hidrogel sobre el rendimiento de semilla de tres cultivares de Brachiaria ssp . Los niveles fueron 0,10 y 20 Kg ha-¹ de hidrogel, y los cultivares; Insurgente, Mulato y Toledo. Las variables consideradas fueron: altura de planta al 100% de floración (APF,densidad de tallos (DT, densidad de tallos reproductivos primarios (DTRP,densidad de tallos reproductivos secundarios (DTRS, porcentaje de acame (PA, rendimiento de semilla bruta (RSBR, rendimiento de semilla ventilada (RSVE y rendimiento de semilla pura (RSPU. En el análisis estadístico a todas las variables se les aplicó el análisis de varianza para evaluar el efecto del hidrogel y el comportamiento de los cultivares en el rendimiento de semilla. Se efectuaron las pruebas de comparación múltiple de medias de Tukey para conocer si existió asociación de las variables de estudio. El análisis de varianza mostró que existió diferencias significativas (P <0.05 para el factor cultivar en las variables: (RSVE, (RSPU, (DT, (DTRP y (PA y altamente significativas (P<0.01 en (RSBR, (APF y (DTRS. En relación al factor hidrogel no se encontraron diferencias estadísticas en ninguna de las variables estudiadas. En tanto que en la interacción cultivar por hidrogel sólo la variable (DT presentó diferencias significativas (P<0.05. La comparación múltiple de medias evidenció que existió diferencias estadísticas entre cultivares en todas las variables de estudio, destacando que en la variable (RSBR, el cv Mulato fue el que presentó la mejor media con 516.06 Kg de semilla ha-¹ mientras que para las variables (RSVE y (RSPU fue el cv Toledo, con 88.36 y 82.45 Kg ha-¹ respectivamente. En relación a los niveles de hidrogel no se encontró diferencias estadísticas en ninguna de las variables de estudio.AbstractIt was evaluated the effect of three hidrogel levels

  14. Detection of Pantoea stewartii ssp. stewartii from maize seeds

    Science.gov (United States)

    This chapter is one of 52 that will compose the second edition of the Laboratory Manual for the Detection of Plant Pathogenic Bacteria from Seeds and other Planting Material, to be published by the American Phytopathological Society. The chapter presents a description of Pantoea stewartii, the causa...

  15. Secure Service Provisioning (SSP) Framework for IP Multimedia Subsystem (IMS)

    OpenAIRE

    Sher, Muhammad

    2008-01-01

    Mit dem Erscheinen mobiler Multimediadienste, wie z. B. Unified Messaging, Click-to-Dial-Applikationen, netzwerkübergeifende Multimedia-Konferenzen und nahtlose Multimedia-Streming-Dienste, begann die Konvergenz von mobilen Kommunikationsetzen und Festnetzen, begleitet von der Integration von Sprach- und Datenkommunikations-Übertragungstechnik Diese Entwicklungen bilden die Voraussetzung für die Verschmelzung des modernen Internet auf der einen Seite mit der Telekommunikation im klassischen S...

  16. Full Scale Test of a SSP 34m boxgirder 2

    DEFF Research Database (Denmark)

    Jensen, Find Mølholt; Branner, Kim; Nielsen, Per Hørlyk;

    This report presents the setup and result from three static full-scale tests of the reinforced glass fiber/epoxy box girder used in a 34m wind turbine blade. One test was without reinforcement one with cap reinforcement and the final test was with rib reinforcement. The cap reinforcement test was...... the following tests: 1) Flapwise bending with no reinforcement 2) Flapwise bending with wire reinforcements 3) Flapwise bending with rib reinforcements...

  17. Radiosensitivity of spores of Paenibacillus larvae ssp. larvae in honey

    International Nuclear Information System (INIS)

    Irradiation, usually used in combination with other conventional methods of conservation, has been proven to be an efficient tool to ensure the safety of many types of foods by destroying pathogenic microorganisms and extending their shelf-lives. This work has investigated the efficacy of gamma irradiation to inactivate spores of the bacterium Paenibacillus larvae that causes the 'American foulbrood', a highly contagious disease still exotic in Brazil that kills bees and contaminates honey, preventing its commercialization and causing great economical losses. In this study, 60 g samples of two types of honey inoculated with 3.5x103 spores/mL of that bacterium were irradiated with doses of 0, 5, 7.5, 10, 12.5 and 15 kGy and counted. The analyses indicated a mean reduction of 97.5±0.7% in the number of viable spores exposed to 5 kGy. The application of doses of 7.5 kGy or higher yielded no viable spores above the detection threshold (10/mL). In addition the value of D10 (3.1±0.3 kGy) was estimated and the logarithm of the population of viable spores of Paenibacillus larvae subsp. larvae was determined as linear and quadratic polynomial functions of the radiation dose. The results indicated that the dose of 10 kGy could be insufficient to assure complete sterilization of honey in some cases while suggesting that 25 kGy would perform such task adequately. (author)

  18. Radiosensitivity of spores of Paenibacillus larvae ssp. larvae in honey

    Energy Technology Data Exchange (ETDEWEB)

    Almeida, Wanderley Mendes de [Ministerio da Agricultura, Pecuaria e Abastecimento, Rio de Janeiro, RJ (Brazil). Servico de Inspecao de Produtos de Origem Animal]. E-mail: sipa-rj@agricultura.gov.br; Vital, Helio de Carvalho [Centro Tecnologico do Exercito CTEx, Rio de Janeiro, RJ (Brazil). Div. de Defesa Quimica, Biologica e Nuclear]. E-mail: vital@ctex.eb.br; Schuch, Dulce Maria Tocchetto [Ministerio da Agricultura, Pecuaria e Abastecimento, Porto Alegre, RS (Brazil)]. E-mail: micro-lara-rs@agricultura.gov.br

    2007-07-01

    Irradiation, usually used in combination with other conventional methods of conservation, has been proven to be an efficient tool to ensure the safety of many types of foods by destroying pathogenic microorganisms and extending their shelf-lives. This work has investigated the efficacy of gamma irradiation to inactivate spores of the bacterium Paenibacillus larvae that causes the 'American foulbrood', a highly contagious disease still exotic in Brazil that kills bees and contaminates honey, preventing its commercialization and causing great economical losses. In this study, 60 g samples of two types of honey inoculated with 3.5x10{sup 3} spores/mL of that bacterium were irradiated with doses of 0, 5, 7.5, 10, 12.5 and 15 kGy and counted. The analyses indicated a mean reduction of 97.5{+-}0.7% in the number of viable spores exposed to 5 kGy. The application of doses of 7.5 kGy or higher yielded no viable spores above the detection threshold (10/mL). In addition the value of D{sub 10} (3.1{+-}0.3 kGy) was estimated and the logarithm of the population of viable spores of Paenibacillus larvae subsp. larvae was determined as linear and quadratic polynomial functions of the radiation dose. The results indicated that the dose of 10 kGy could be insufficient to assure complete sterilization of honey in some cases while suggesting that 25 kGy would perform such task adequately. (author)

  19. A Genetic Linkage Map of Brassica carmpestris L.ssp.pekinensis (syn. B.rapa L.ssp.pekinensis )

    Institute of Scientific and Technical Information of China (English)

    YU Shuan-cang; WANG Yong-jian; ZHENG Xiao-ying

    2003-01-01

    A molecular genetic map of Chinese cabbage was constructed with a 102 recombinant inbred(RI) population from a cross of two cultivated Chinese cabbage lines 177 and 276, using AFLP and RAPDmarkers. 352 markers including 265 AFLP markers and 87 RAPD markers were integrated into 17 linkagegroups. It covered a total of 2 665.7 cM with an average interval of 7.6 cM. AFLP marker is efficient formap construction while it easily forms clusters to cause big gaps in map. A total of 13. 92% abnormal segrega-tion markers distributed in the map. The molecular genetic map is fundamental for gene localization, compar-ative genomics, and QTL mapping of important agronomic traits.

  20. Application of low-dose gamma irradiation to extend the shelf life of minimally processed Red Beet (Beta vulgaris sp. vulgaris L.), cv. Early Wonder; Aplicacao de baixas doses de radiacao gama para extensao da vida util de beterraba vermelha (Beta vulgaris ssp. vulgaris L.), cv. Early Wonder, minimamente processada

    Energy Technology Data Exchange (ETDEWEB)

    Hernandez, Nilber Kenup

    2006-07-01

    This study was aimed at investigating the effects of low-dose gamma irradiation on shelf-life extension and phyto sanitary safety of minimally processed red beet with basis on physicochemical; microbiological; chemical and sensory analyses. The samples (Beta vulgaris ssp. vulgaris L.), Early Wonder cultivar, were cultivated in the experimental area of the Horticulture Sector of the Departamento de Fitotecnia of the Instituto de Agronomia, Universidade Federal Rural do Rio de Janeiro, Seropedica, RJ, as part of two experiments performed during the second semester of 2005. In each experiment, 1200 plants (40 per linear meter of terrain) were sowed. Physicochemical analyses (fresh mass; length; average diameter and total soluble solids) of the edible part of the red beets (their tuberous roots) were periodically carried out in order to assess the most appropriate time for harvest by monitoring the development of the plants. Those times were found to be 104 and 73 days after transplanting, respectively. The harvested edible part of the roots were minimally processed and separated in two groups: (1) gamma irradiated (with doses of 0.5; 1.0 and 1.5 kGy) and (2) non-irradiated (control). All samples were stored at 8 degree C. Microbiological analyses were performed during the storage period (22 and 21 days, for experiments 1 and 2, respectively) in order to evaluate the phyto sanitary quality of the samples (Salmonella sp.; coliforms and total count of mesophilic aerobic and lactic acid bacteria). The samples irradiated with 1.0 and 1.5 kGy were found to remain appropriate for consumption for 21 days, as compared to only 7 days for the control. Monitoring of chemical composition was also performed and included the determination of saccharose; glucose; fructose and vitamins B1 and B2. No difference was found between the concentrations of those vitamins in irradiated and control samples at the end of the storage period, whereas significant changes in sugar contents were

  1. The Influence of Gene Soluble Starch Synthase Ⅱ a Gene(SSII-3) on Rice Starch Viscosity (RVA profile) in Non-glutinous Rice(Oryza sativa ssp.indica)%非糯水稻的可溶性淀粉合成酶Ⅱa基因(SSII-3)对稻米淀粉黏滞性谱(RVA谱)特征的影响

    Institute of Scientific and Technical Information of China (English)

    苏文丽; 向珣朝; 徐艳芳; 龙小林; 康翠芳; 许顺菊

    2014-01-01

    稻米淀粉黏滞性谱(rice starch viscosity,RVA profile)可以比较灵敏地反映不同水稻品种间淀粉的品质差异,其遗传表现及淀粉合成相关基因(starch synthesis-related genes,SSRG)对RVA谱的影响已受到广泛重视.本研究利用籼型(Oryza sativa ssp.indica)光温敏核不育系广占63S和潜力恢复系CG132R,构建的可溶性淀粉合成酶Ⅱa基因(SSH-3)和颗粒结合淀粉合成酶基因(Wx)均存在不同等位基因的回交重组自交系作为供试材料,在Wxb Wxb、WxaWxb和WxaWxa基因型的遗传背景下,研究非糯水稻SSII-3基因对RVA谱特征的影响,并与Wx基因进行比较,结果表明:(1)糊化温度与RVA谱中除最高黏度(peak viscosity,PKV)之外的7个特征值显著或极显著相关,其中,与热浆黏度(hot paste viscosity,HPV)、冷胶黏度(cool paste viscosity,CPV)、回复值(consistence,CSv)、消减值(setback,SBV)、峰值时间(peak time,PeT)显著或极显著负相关,与崩解值(breakdown,BDV)、成糊温度(pasting temperature,PT)极显著正相关,说明在非糯水稻中,控制糊化温度的SSII-3基因对RVA谱特征有重要影响,并且SSII-3基因对RVA谱各特征值的影响方向与Wx基因的影响方向相反;(2)SSII-3基因对RVA谱特征值的作用受Wx基因的影响,其中,SSII-3与Wx基因的互作对HPV、CPV、CSV有显著或极显著影响;(3)特征值PT、PeT主要受SSII-3基因的影响.Wx基因是控制RVA谱特征的主效基因,SSII-3基因作为稻米糊化温度的主效基因,是对RVA谱起重要作用的另一个基因,研究Wx基因表达的非糯水稻中,SSII-3基因对RVA谱的影响及其与Wx基因的互作,对于评价稻米的蒸煮与食用品质和选育优质水稻品种具有重要的应用价值.

  2. Efficiency of PCR-based methods in discriminating Bifidobacterium longum ssp. longum and Bifidobacterium longum ssp. infantis strains of human origin

    Czech Academy of Sciences Publication Activity Database

    Šrůtková, Dagmar; Španová, A.; Špano, M.; Dráb, V.; Schwarzer, Martin; Kozáková, Hana; Rittich, B.

    2011-01-01

    Roč. 87, č. 1 (2011), s. 10-16. ISSN 0167-7012 R&D Projects: GA MŠk 2B06053 Institutional research plan: CEZ:AV0Z50200510 Keywords : Bifidobacterium longum * ARDRA * pcr Subject RIV: EC - Immunology Impact factor: 2.086, year: 2011

  3. Erwinia carotovora ssp. carotovora Infection Induced "Defense Lignin" Accumulation and Lignin Biosynthetic Gene Expression in Chinese Cabbage (Brassica rapa L. ssp. pekinensis)

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    Erwinia carotovora subsp. carotovora (Ecc) infects and causes soft rot disease in hundreds of crop species including vegetables, flowers and fruits. Lignin biosynthesis has been implicated in defensive reactions to injury and pathogen Infection in plants. In this work, variations of lignin content and gene expression in the molecular interaction between Chinese cabbage and Ecc were investigated. H2O2 accumulation and peroxidase activity were detected by 3, 3'-Dimethoxybenzidine staining at mocked and Ecc-inoculated sites of Chinese cabbage leafstalks. Klason lignin content in inoculated plants increased by about 7.84%, 40.37%, and 43.13% more than that of the mocked site at 12, 24 and 72 h after inoculation, respectively. Gas chromatography detected more p-coumaryl (H) and less coniferyl (G) and sinapyl (S)monolignins in leafstalks of Chinese cabbage. All three monomers increased in Ecc-infected leafstalks, and the Ecc-induced "defense lignin" were composed of more G and H monolignins, and less S monolignin. After searching the expressed sequence tags (EST) data of Chinese cabbage, 12 genes putatively encoding enzymes involved in lignin biosynthesis were selected to study their expression. All of these genes could be Induced by mock inoculation and Ecc infection, while the gene expression lasted for several more hours in the infected samples than in mocked and untreated plants. Our results indicated that "defense lignin" was different from the developmental lignin in composition; G and S monolignins were significantly induced in plants in response to the soft rot Ecc; thus, lignin biosynthesis was differentially regulated and played a role in plant response to the soft rot Ecc.

  4. Tolerance and safety of Lactobacillus paracasei ssp. paracasei in combination with Bifidobacterium animalis ssp. lactis in a prebiotic-containing infant formula: a randomised controlled trial

    NARCIS (Netherlands)

    Vlieger, A.M.; Robroch, A.H.; Van Buuren, S.; Kiers, J.; Rijkers, G.; Benninga, M.A.; te Biesebeke, R.

    2009-01-01

    The addition of probiotics to infant formula has been shown to be an efficient way to increase the number of beneficial bacteria in the intestine in order to promote a gut flora resembling that of breast-fed infants. The objective of the present study was to evaluate the safety and tolerance of a co

  5. Tolerance and safety of Lactobacillus paracasei ssp paracasei in combination with Bifidobacterium animalis ssp lactis in a prebiotic-containing infant formula: a randomised controlled trial

    NARCIS (Netherlands)

    A.M. Vlieger; A. Robroch; S. van Buuren; J. Kiers; G. Rijkers; M.A. Benninga; R. te Biesebeke

    2009-01-01

    The addition of probiotics to infant formula has been shown to be an efficient way to increase the number of beneficial bacteria in the intestine in order to promote a gut flora resembling that of breast-fed infants. The objective of the present study was to evaluate the safety and tolerance of a co

  6. PCR-SSP HLA-B27亚型检测及意义%HLA-B27 subtyping by PCR-SSP method

    Institute of Scientific and Technical Information of China (English)

    张志梅; 武大林

    2004-01-01

    目的对HLA-B27进行亚型检测并探讨其临床意义.方法对38例(AS样本24例;非AS样本14例)血清学确定为HLA-B27阳性的样本采用PCR-SSP方法进行HLA-B27亚型分型.结果38例样本,PCR-SSP分型36例B27阳性,2例B27阴性,误差率为5.26%.36例B27阳性中,B*2704占77.78%(28/36例);24例AS样本与14例非AS样本B*2704所占比例统计学分析无显著差异(x2=0.321,P>0.05).结论中国汉族人HLA-B27亚型以B*2704为主,AS与HLA-B27各亚型的特异基因可能无关.PCR方法准确、实用、快捷、可靠.

  7. Dissecting the complex molecular evolution and expression of polygalacturonase gene family in Brassica rapa ssp. chinensis.

    Science.gov (United States)

    Liang, Ying; Yu, Youjian; Shen, Xiuping; Dong, Heng; Lyu, Meiling; Xu, Liai; Ma, Zhiming; Liu, Tingting; Cao, Jiashu

    2015-12-01

    Polygalacturonases (PGs) participate in pectin disassembly of cell wall and belong to one of the largest hydrolase families in plants. In this study, we identified 99 PG genes in Brassica rapa. Comprehensive analysis of phylogeny, gene structures, physico-chemical properties and coding sequence evolution demonstrated that plant PGs should be classified into seven divergent clades and each clade's members had specific sequence and structure characteristics, and/or were under specific selection pressures. Genomic distribution and retention rate analysis implied duplication events and biased retention contributed to PG family's expansion. Promoter divergence analysis using "shared motif method" revealed a significant correlation between regulatory and coding sequence evolution of PGs, and proved Clades A and E were of ancient origin. Quantitative real-time PCR analysis showed that expression patterns of PGs displayed group specificities in B. rapa. Particularly, nearly half of PG family members, especially those of Clades C, D and F, closely relates to reproductive development. Most duplicates showed similar expression profiles, suggesting dosage constraints accounted for preservation after duplication. Promoter-GUS assay further indicated PGs' extensive roles and possible redundancy during reproductive development. This work can provide a scientific classification of plant PGs, dissect the internal relationships between their evolution and expressions, and promote functional researches. PMID:26506823

  8. Mechanical properties of structural maritime pine sawn timber from Galicia (Pinus pinaster Ait. ssp. atlantica)

    Energy Technology Data Exchange (ETDEWEB)

    Carballo, J.; Hermoso, E.; Fernandez-Golfin, J. I.

    2009-07-01

    The use of maritime pine sawn timber in structural applications requires knowledge of its mechanical properties. Standards have changed, however, since the last research on this timber was performed. In the present study, 491 beams of maritime pine from Gaelic, of structural-use size but different cross-section, were tested according to these modified standards. Each beam was visually graded according to standard UNE 56.544 and subjected to a four point bending test. The strength classes assigned by the visual grades awarded suggest this material to have greater structural capacity than that currently assumed. The relationships between the modulus of elasticity, strength and density were also examined. (Author) 25 refs.

  9. Characterisation of sugar beet (Beta vulgaris L. ssp. vulgaris varieties using microsatellite markers

    Directory of Open Access Journals (Sweden)

    De Riek Jan

    2010-05-01

    Full Text Available Abstract Background Sugar beet is an obligate outcrossing species. Varieties consist of mixtures of plants from various parental combinations. As the number of informative morphological characteristics is limited, this leads to some problems in variety registration research. Results We have developed 25 new microsatellite markers for sugar beet. A selection of 12 markers with high quality patterns was used to characterise 40 diploid and triploid varieties. For each variety 30 individual plants were genotyped. The markers amplified 3-21 different alleles. Varieties had up to 7 different alleles at one marker locus. All varieties could be distinguished. For the diploid varieties, the expected heterozygosity ranged from 0.458 to 0.744. The average inbreeding coefficient Fis was 0.282 ± 0.124, but it varied widely among marker loci, from Fis = +0.876 (heterozygote deficiency to Fis = -0.350 (excess of heterozygotes. The genetic differentiation among diploid varieties was relatively constant among markers (Fst = 0.232 ± 0.027. Among triploid varieties the genetic differentiation was much lower (Fst = 0.100 ± 0.010. The overall genetic differentiation between diploid and triploid varieties was Fst = 0.133 across all loci. Part of this differentiation may coincide with the differentiation among breeders' gene pools, which was Fst = 0.063. Conclusions Based on a combination of scores for individual plants all varieties can be distinguished using the 12 markers developed here. The markers may also be used for mapping and in molecular breeding. In addition, they may be employed in studying gene flow from crop to wild populations.

  10. Genetic Divergence in Advanced Lines of Oilseed Rape (Brassica napus ssp oleifera L.

    Directory of Open Access Journals (Sweden)

    Khandker Shazia Afrin

    2014-02-01

    Full Text Available Normal 0 false false false EN-US X-NONE X-NONE MicrosoftInternetExplorer4 /* Style Definitions */ table.MsoNormalTable {mso-style-name:"Table Normal"; mso-tstyle-rowband-size:0; mso-tstyle-colband-size:0; mso-style-noshow:yes; mso-style-priority:99; mso-style-qformat:yes; mso-style-parent:""; mso-padding-alt:0cm 5.4pt 0cm 5.4pt; mso-para-margin:0cm; mso-para-margin-bottom:.0001pt; mso-pagination:widow-orphan; font-size:11.0pt; font-family:"Calibri","sans-serif"; mso-ascii-font-family:Calibri; mso-ascii-theme-font:minor-latin; mso-fareast-font-family:"Times New Roman"; mso-fareast-theme-font:minor-fareast; mso-hansi-font-family:Calibri; mso-hansi-theme-font:minor-latin; mso-bidi-font-family:"Times New Roman"; mso-bidi-theme-font:minor-bidi;} A field experiment was conducted with 22 Brassica napus L. advanced lines at the experimental farm of Sher-e-Bangla Agricultural University, Dhaka from November 2008 to March 2009 to asses genetic diversity among advanced lines of Brassica napus L. Different multivariate analysis techniques were used to classify 22 Brassica napus genotypes. The genotypes were grouped into four clusters. The highest inter-cluster distance was observed between clusters II and IV whereas the maximum intra-cluster distance was found in cluster II. Therefore, the genotypes belonging to cluster I and cluster II, cluster II and cluster III and cluster III and cluster IV have been selected for future hybridization program. The role of number of secondary branches per plant and number of siliqua per plant in both vectors were important components for genetic divergence in these materials. Considering group distance and other agronomic performance the inter-genotypic crosses between G1 and G2, G2 and G6; G6 and G7; G6 and G8 and G7 and G8 might be suggested for future hybridization program.

  11. Rational Discovery of T Helper Epitopes Specific for Bovine Infections with Mycobacterium avium ssp paratuberculosis

    DEFF Research Database (Denmark)

    Lundegaard, Claus; Aagaard, C.; Ussery, David; Andersen, P. L.; Jungersen, Gregers

    2011-01-01

    Paratuberculosis, a chronic wasting disease in ruminants, is causing significant losses to both EU dairy and meat producers, due to a decreasing milk yield, loss of body weight and early replacements. The absence of adequate diagnostic tools for early detection of subclinically infected livestock...... bioinformatics tools has been used to identify peptides in the MAP genome, which are predicted to bind to bovine MHC (BoLA) class II antigen presenting molecules. Comparative genomics tools has been used to further select MAP specific peptides 100% conserved in the two MAP strains and with low similarity to...... goal is to combine positive responding peptides with new promising adjuvants in order to develop effective bovine MAP vaccines which do not cross react with traditional skin tests for M. bovis infections....

  12. Cytogenetic diversity of simple sequences repeats in morphotypes of Brassica rapa ssp. Chinensis

    NARCIS (Netherlands)

    Zheng, Jin Shuang; Sun, Cheng Zhen; Zhang, Shu Ning; Hou, Xi Lin; Bonnema, Guusje

    2016-01-01

    A significant fraction of the nuclear DNA of all eukaryotes is comprised of simple sequence repeats (SSRs). Although these sequences are widely used for studying genetic variation, linkage mapping and evolution, little attention had been paid to the chromosomal distribution and cytogenetic divers

  13. Fine mapping and characterization of the or gene in Chinese cabbage (Brassica rapa L. ssp pekinensis).

    Science.gov (United States)

    Zou, C L; Zheng, Y; Wang, P; Zhang, X; Wang, Y-H; Liu, Z Y; Feng, H

    2016-01-01

    Orange inner leaves/heads is a qualitative trait in Chinese cabbage that is controlled by a single recessive gene. Orange head Chinese cabbage contain more carotenoids than its white head counterpart; hence, this trait is of interest to both researchers and consumers. In this study, we selected the orange head Chinese cabbage line 07A163 and the white head Chinese cabbage line Chiifu as test materials. We localized the target gene controlling the orange head trait to the A09 linkage group, with a physical distance of approximately 19.9 kb between the two markers, syau26 and syau28. This region contains six candidate genes, including Bra031539, which was predicted to encode CRTISO, a carotenoid isomerase specifically required for carotenoid biosynthesis. A comparison of the nucleic acid sequences of the two test materials revealed 88 and 7-bp deletions and 88 SNPs in the promoter region of Bra031539 in line 07A163, along with a 6-bp deletion in the first exon and early termination at the 3' end of this gene. BLAST analysis revealed that 22 amino acids were altered and 17 amino acids were lost in Bra031539 in the orange head line 07A163. We developed the BrPro1 molecular marker in the promoter region of Bra031539 that can be used for early identification of orange head materials, thereby accelerating the breeding process of orange head Chinese cabbage. PMID:27173304

  14. Molecular characterization and transcriptome analysis of orange head Chinese cabbage (brassica rapa L. ssp.pekinensis)

    Science.gov (United States)

    Orange head leaves are a desirable quality trait for Chinese cabbage. Our previous fine mapping identified BrCRTISO as the Br-or candidate gene for the orange Chinese cabbage mutant. Here we examined the BrCRTISO gene from white and orange head Chinese cabbage. While BrCRTISO from the white control ...

  15. Occurrence and fluctuations of Acidithiobacillus ssp. in uranium mine effluents, Caldas, MG

    International Nuclear Information System (INIS)

    Sulphide ores that are present in mining areas can cause serious environmental problems because of the action of chemolithotrophic bacteria of the Acidithiobacillus genera, mainly A. ferroxidans and A. thiooxidans. These microorganisms are capable of oxidizing sulphide minerals, elemental sulphur and ferrous ion, possibly mobilizing radionuclides such as uranium into the environment. In this context, the present study was undertaken in order to determine the occurrence and fluctuations of populations of A. ferroxidans and A. thiooxidans in effluents from an uranium mine, part of the Ore Treatment Unit (UTM) in Caldas, MG - Brazil, analyzing samples from 9 sampling points (CM, BS, D3, 25, 27, 32, 41, 75, and 76). The results showed that the population of A. thiooxidans occurs more often (44.4%) than the population of A. ferroxidans (31.5%). In the sample points within the UTM-environment interface, points 25 and 76 were considered the most susceptible to acid mine drainage and activity of bacteria involved in metal bioleaching. The seasonal behavior of some of the variables observed at points CM, D3, and BS, when evaluated simultaneously, such as high Eh values, low pH values, the detection of greater percentages of incidence and higher counts of A. ferroxidans and A. thiooxidans, showed that these points are the main locations for the occurrence of acid mine drainage and bacterial bioleaching in the UTM and should be considered as critical points for a possible decommissioning action. (author)

  16. Occurrence and fluctuations of Acidithiobacillus ssp. in uranium mine effluents, Caldas, MG

    Energy Technology Data Exchange (ETDEWEB)

    Campos, Michelle Burato de; Roque, Claudio Vitor; Gomes, Heliana de Azevedo [Brazilian Nuclear Energy Commission (CNEN-MG), Pocos de Caldas, MG (Brazil)]. E-mail: michelle_borato@hotmail.com; cvroque@cnen.gov.br; hgomes@cnen.gov.br

    2007-07-01

    Sulphide ores that are present in mining areas can cause serious environmental problems because of the action of chemolithotrophic bacteria of the Acidithiobacillus genera, mainly A. ferroxidans and A. thiooxidans. These microorganisms are capable of oxidizing sulphide minerals, elemental sulphur and ferrous ion, possibly mobilizing radionuclides such as uranium into the environment. In this context, the present study was undertaken in order to determine the occurrence and fluctuations of populations of A. ferroxidans and A. thiooxidans in effluents from an uranium mine, part of the Ore Treatment Unit (UTM) in Caldas, MG - Brazil, analyzing samples from 9 sampling points (CM, BS, D3, 25, 27, 32, 41, 75, and 76). The results showed that the population of A. thiooxidans occurs more often (44.4%) than the population of A. ferroxidans (31.5%). In the sample points within the UTM-environment interface, points 25 and 76 were considered the most susceptible to acid mine drainage and activity of bacteria involved in metal bioleaching. The seasonal behavior of some of the variables observed at points CM, D3, and BS, when evaluated simultaneously, such as high Eh values, low pH values, the detection of greater percentages of incidence and higher counts of A. ferroxidans and A. thiooxidans, showed that these points are the main locations for the occurrence of acid mine drainage and bacterial bioleaching in the UTM and should be considered as critical points for a possible decommissioning action. (author)

  17. Biomphalaria Tenagophila Guaibensis ssp. n. from Southern Brazil and Uruguay (pulmonata: Planorbidae. I. Morphology

    Directory of Open Access Journals (Sweden)

    W. Lobato Paraense

    1984-12-01

    Full Text Available A new subspecies of planorbid snail, biomphalaria tenagophila guaibensis, is described. It has been found along the coastal belt of the Brazilian state of rio grande do Sul and the middle part of Uruguay, from Porto Alegre to Mercedes. It differs from the nominate subspecies, Biomphalaria tenagophila tenagophila, in the appearance of the penial complex (prepuce longer and proportionally slenderer in B. t. guaibensis, shorter and proportionally stouter in b. t. tenagophila, in the ratio between the lengths of the penial sheath and the prepuce, in the ratio between the lengths of the uterine complex and the penial complex, and in a coefficient of difference of 2.44 for the ratio between the penis sheath and prepuce and of 2.02 for the ratio between the uterine complex and penial complex. The shell and the other organs of the genital system are similar in both subspecies. B. t. guaibensis is very similar to Biomphalaria occidentalis Paraense, 1981, but is readily separated from it by the presence of a vaginal pouch, which is lacking in the latter, besides showing highly significant difference in the penis sheath: prepuce and uterine complex: penial complex ratios. Crossbreeding experiments which lend additional support to the recognition of B. t. guaibensis as a subspecies will be reported elsewhere.É descrita uma nova subespécie de molusco planorbídeo, Biomphalaria tenagophila guaibensis, que tem sido encontrada ao longo da faixa costeira do Estado do Rio Grande do Sul e da parte média do Uruguai, de Porto Alegre a Mercedes. Distingue-se da espécie nominativa, Biomphalaria tenagophila tenagophila, pelo aspecto do complexo peniano (prepúcio mais longo e proporcionalmente mais delgado em B. t. guaibensis, mais curto e proporcionalmente mais grosso em b. t. tenagophila0, pela razão entre os comprimentos da bainha do pênis e do prepúcio, pela razão entre os comprimentos do complexo uterino e do complexo peniano, e por um coeficiente de diferença de 2.44 para a razão entre a bainha do pênis e o prepúcio e de 2.02 para a razão entre o complexo uterino e o complexo peniano. A concha e os outros órgãos do sistema genital são semelhantes nas duas subespécies. A B. t guaibensis tem grande semelhança com a Biomphalaria occidentalis Paraense, 1981, mas dela se distingue facilmente pela presença de uma bolsa vaginal, que falta na B. occidentalis, além de apresentar diferença altamente significante nas razões bainha do pênis: prepúcio e complexo uterino: complexo peniano. Experiências de cruzamento que trazem apoio adicional ao reconhecimento da B. t. guaibensis como subespécie serão relatadas em outra publicação.

  18. PENGARUH SSP TEMATIK-INTEGRATIF TERHADAP KARAKTER DISIPLIN DAN TANGGUNG JAWAB SISWA KELAS III SD

    Directory of Open Access Journals (Sweden)

    An-Nisa Apriani

    2015-01-01

    ABSTRACT This research was aimed to find out the effect of thematic-integrative Subject Specific Pedagogy  in inculcating the character of (1 discipline and (2 responsibility of year III students of elementary schools in cluster 2 in Banguntapan Subdistrict. This research was a quasi-experiment with a pretest and posttest control group design. The data analysis technique used was Anova test with significance level of 0.05. The results of the research were (1 Thematic Integrative Subject Specific Pedagogy had a significant effect in inculcating character of discipline. The result of the Anova test on the post-test score of discipline character among the control group, the experimental I and II groups showed that the value of F was 18.173 with db 86 and significance level of 0.00. The significance level was less than 0.05. (2 Thematic Integrative Subject Specific Pedagogy  had a significant effect in inculcating character of responsibility among the control group, the experimental I and II groups. The result of the Anova test on the posttest score of the responsibility character showed that the value of F was 17.809 with db 86 and significance level of 0.00. The significance level was less than 0.05. Based on the data it could be concluded that there was a positive and significant effect of Thematic Integrative Subject Specific Pedagogy in inculcating characters of discipline and responsibility of year III students of elementary schools in cluster 2 in  Banguntapan Subdistrict. Keywords: thematic integrative subject specific pedagogy, characters of discipline and responsibility.

  19. Carrot (Daucus carota L . ssp. sativus (Hoffm. Arcang. as source of antioxidants

    Directory of Open Access Journals (Sweden)

    Judita BYSTRICKÁ

    2015-11-01

    Full Text Available Carrot (Daucus carota L. s sp. sativus (Hoffm. Arcang. is a significant source of vitamins (A, B, C and beta carotene. Further it contains vitamins B, C, E, H, folic acid and pantothenic acid. Carrot is an important source of trace elements (K, Na, Ca, Mg, P, S, Mn, Fe, Cu and Zn. Consumption of carrot improves eyesight, lowers cholesterol and improves digestion. In this work we evaluated and compared content of total polyphenols, ß-caroteneand antioxidant activity in five varieties of carrot (’Jitka’, Kardila’, Katlen , Rubína’ and Koloseum Samples of carrot were collected at full maturity stages from area of Bardejov. Samples of fresh carrot were homogenized (25 g in 50 ml 80 % ethanol and analysed after sixteen hours. The content of the total polyphenols was determined by using the Folin-Ciocalteu reagent (FCR. The content of ß-carotene was determined spectrophotometricaly at 450 nm. Antioxidant activity was measured using a compound DPPH (2.2-diphenyl-1-picrylhydrazyl at 515.6 nm using spectrophotometer. Total polyphenols content in samples ranged from 81.25 ± 13.11 mg/kg to 113.69 ± 11.57 mg/kg and content of ß-carotenes ranged from 24.58 ± 2.38 mg/kg to 124.28 ± 3.54 mg/kg. We also evaluated and compared the antioxidant activity in selected varieties of ca rrot, which varied from 6.88 ± 0.92 % to 9.83 ± 0.62 %. Statistically si gnificant the highest value of total polyphenols was recorded in variety of Koloseum (113.69 ± 11.57 mg/kg. This variety is also character ized by the highest content of ß- carotene (124.28 ± 3.54 mg/kg as well as the highest value of antioxidant activity (9.83 ± 0.62 %.

  20. Integrated in situ and ex situ approach for Gentiana lutea L. ssp. lutea conservation

    OpenAIRE

    Cuena Lombrana, Alba

    2016-01-01

    Gentiana lutea L. subsp lutea (hereafter G. lutea) is a long-lived geophyte, which has high medicinal value for the intensely bitter properties residing mainly in the root, being the main vegetable bitter employed in homeopathy and for the liqueurs production. G. lutea is presented in the Annex V of the Directive 92/43/EEC. In addition, it’s included in the List of endangered medicinal plants in the Annex D to the Council Regulation (EC) No. 338/97 of EU, whose purpose is the p...

  1. Pectin isolated from prickly pear (Opuntia SSP) modifies LDL metabolism in cholesterol-fed guinea pigs

    International Nuclear Information System (INIS)

    The effects of dietary pectin on plasma and hepatic cholesterol (CH) levels, plasma lipoprotein profiles, hepatic 3-hydroxy-3-methylglutaryl Coenzyme A (HMG-CoA) reductase activity, and low density lipoprotein (LDL) binding to hepatic membranes were investigated by feeding 1% pectin to guinea pigs on a high CH diet. Animals were fed either chow + 0.25% CH (HC diet) or the CH diet + 1% prickly pear pectin (HC-P diet) for 25 days. Plasma CH levels were decreased 26% by the HC-P with 33% decreases in LDL and KDL. LDL peak density shifted from 1.040 to 1.055 g/ml with pectin. Hepatic total, free and esterified CH levels were reduced 60, 40 and 85% respectively by the HC-P diet. In contrast, HMG-CoA reductase activity was unaffected. 125I-LDL binding to hepatic membranes was increased by intake of the HC-P diet compared to the HC diet. The affinity of the apo B/E receptor for LDL was not affected by dietary pectin while the receptor number was increased 1.5-fold in animals on the HC-P diet. These data suggest that the parameters of HC metabolism affected by dietary pectin are consistent with an increased demand on the hepatic CH pools which possibly results from increased fecal excretion of bile acids

  2. Antifungal Activity and Action Mechanism of Histatin 5-Halocidin Hybrid Peptides against Candida ssp.

    Directory of Open Access Journals (Sweden)

    Juhye Han

    Full Text Available The candidacidal activity of histatin 5 is initiated through cell wall binding, followed by translocation and intracellular targeting, while the halocidin peptide exerts its activity by attacking the Candida cell membrane. To improve antimicrobial activities and to understand the killing mechanism of two peptides, six hybrid peptides were designed by conjugating histatin 5 and halocidin. A comparative approach was established to study the activity, salt tolerance, cell wall glucan binding assay, cytotoxicity, generation of ROS and killing kinetics. CD spectrometry was conducted to evaluate secondary structures of these hybrid peptides. Furthermore the cellular localization of hybrid peptides was investigated by confocal fluorescence microscopy. Of the six hybrid congeners, di-PH2, di-WP2 and HHP1 had stronger activities than other hybrid peptides against all tested Candida strains. The MIC values of these peptides were 1-2, 2-4 and 2-4 μg/ml, respectively. Moreover, none of the hybrid peptides was cytotoxic in the hemolytic assay and cell-based cytotoxicity assay. Confocal laser microscopy showed that di-PH2 and HHP1 were translocated into cytoplasm whereas di-WP2 was accumulated on surface of C. albicans to exert their candidacidal activity. All translocated peptides (Hst 5, P113, di-PH2 were capable of generating intracellular ROS except HHP1. Additionally, the KFH residues at C-terminal end of these peptides were assumed for core sequence for active translocation.

  3. Probiotic Leuconostoc mesenteroides ssp. cremoris and Streptococcus thermophilus induce IL-12 and IFN-γ production

    OpenAIRE

    Kekkonen, Riina A; Kajasto, Elina; Miettinen, Minja; Veckman, Ville; Korpela, Riitta; Julkunen, Ilkka

    2008-01-01

    AIM: To investigate the capacity of potentially probiotic strains from six bacterial genera to induce cytokine production alone or in combinations in order to identify potential enhancing or synergistic effects in order to select probiotic bacteria for in vivo purposes.

  4. THE DAMAGE, BIOLOGY AND CONTROL OF PINE MISTLETOES (Viscum album ssp. austriacum (Wiesb.) Vollman)

    OpenAIRE

    YÜKSEL, Beşir; AKBULUT, Süleyman; KETEN, Akif

    2009-01-01

    Although mistletoes are known as parasitic plants on coniferous forest of Turkey, their control is still an important problem for Forest Service. In this paper, the information on the characteristics of pine mistletoe (biology, damage, and control methods) were gathered from different sources and observations. Possible control methods and damage ratings of mistletoe were discussed. Keywords: Mistletoes, Parasite plant, Pine

  5. Comparison of some indigenous bacterial strains of pseudomonas ssp. for production of biosurfactants

    International Nuclear Information System (INIS)

    Some indigenous pseudomonas spp. were found to have the ability of emulsification, lowering the surface and interfacial tensions, and formation of high reciprocal CMCs. Six strains of Pseudomonas spp were compared for biosurfactant production grown on hexadecane. Supernatant from whole culture broth of these strains could lower surface tension from 65 mN/m to 28-32 nM/m, interfacial tension from 40 nM/m to 1-3 mN/m and had high reciprocal CMCs. When compared for emulsification ability by the culture broth of these strains, the emulsification index (E24) was found to range between 60-65. Biosurfactant containing culture broth of some strains could retain the property up to 80 C, pH of 13 and sodium chloride concentration for 17% which indicates their possible role in some depleted oil well. (author)

  6. Surveillance of Campylobacter ssp. in broiler flocks by PCR on boot sock samples

    DEFF Research Database (Denmark)

    Nordentoft, Steen; Lund, Marianne; Hald, Birthe

    Detection of Campylobacter in feces is traditionally based on microbiological culture from caecum or cloacal swabs at the abattoir, but due to long time for analysis no intervention can be taken. By knowing the status of the flock before it reaches the abattoir, logistic slaughter becomes possible......, i. e. to allocate negative flocks before positive to slaughter, as well as channeling negative flocks to the fresh market and use positive flocks for freeze or marinated products. To know the status of the broiler flock before arriving at the abattoir, a Campylobacter surveillance system based on...... before DNA purification, corresponding to 103 / gram feces. To evaluate the capability of the sock sample to predict the flock status at slaughter the same flocks were also tested at slaughter by pooling 10 cloacal swabs and analysed using the same PCR method. The accordance of the two sampling method...

  7. Effect of ionizing radiation on the morphology, physiology and growth of Leishmania ssp

    International Nuclear Information System (INIS)

    The Leishmania spp is a pathogenic protozoan, which cause different diseases in man. The human diseases, in America, caused by this group of protozoa are divided in cutaneous or tegumentar and visceral, known as kala-azar. In this work, our principal study object was the specie that causes tegumentar leishmaniasis, in Brazil. Metabolic studies of cellular respiration and proteins and nucleic acids synthesis were accomplished using radiation as a form of sterilizing the parasites without however affecting their immunogenic capacity The promastigotes forms of irradiated Leishmania spp were totally sterilized with the dose of 1500 Gy, with their reproductive and nucleic acids, as well as protein synthesis capacity blocked. (author)

  8. SEROTYPES AND ANTIMICROBIAL RESISTANCE OF SALMONELLA ENTERICA SSP IN CENTRAL THAILAND, 2001-2006

    DEFF Research Database (Denmark)

    Pantip, Sirichote; Aroon, B.; Kanokwan, Tienmanee;

    2010-01-01

    . Choleraesuis, S. Enteritidis, S. Typhimurium, and S. Typhi. Children under five years old suffered the most frequently from gastroenteritis. The patients most commonly infected with an invasive serovar were children and people from 26 to 55 years of age. Antimicrobial susceptibility data revealed that S...

  9. Discovering the new RCP and SSP scenarios used by the IPCC

    International Nuclear Information System (INIS)

    This report presents the scenarios defined by a group of experts within the perspective of the 5. IPCC report. This four reference scenarios named RCP (Representative Concentration Pathways) have been designed to foresee the evolution of concentrations of greenhouse gases, of ozone, and of aerosol precursors for the 21. century and beyond. The report also evokes the evolution of simulations used by climatologists, and the introduction of a representation of social and economic evolutions (definition of five families of scenario-types: sustainability, middle of the road, fragmentation, inequality, and conventional development). The consistency of these RCP scenarios and social-economical scenarios is outlined

  10. GENETIC DIVERSITY OF WINTER BREAD WHEAT (TRITICUM AESTIVUM L. SSP. VULGARE

    Directory of Open Access Journals (Sweden)

    Sonja Petrović

    2011-06-01

    Full Text Available Diversity was analyzed based on agronomic and morphologic traits and molecular data. The main objectives of this study were: 1. to estimate genetic diversity of wheat germplasm using agronomic and morphologic traits and molecular markers, 2. to investigate the existence of genetic erosion within tested wheat germplasm, 3. to explore potential utilization of combination of agronomic, morphologic and molecular markers in plant breeding. Forty winter bread wheat varieties were used originating from Croatia, Austria, France, Italy and Russia. Field trial was conducted during two vegetation years (2007/2008, 2008/2009 in three replications according to randomized block design. Ten traits were included in agronomic and morphologic analysis. Composition of high molecular weight glutenin subunits (HMW GS was evaluated for 16 varieties, whereas literature data are used for the rest. Starch composition analysis was based on amylose and amylopectin isolation, their quantity and ratio. For the SSR analysis 26 microsatellite primers were used, and for the AFLP analysis four primer combinations. Statistical analysis was performed using SAS Software 9.1.3, NTSYS ver.2.2., Arlequin ver2.0. and Powermarker ver.3.25. Analyzed varieties displayed highly significant differences (p<0,001 for all agronomic traits and for amylose/amylopectin ratio. High variability of HMW GS was found among varieties. Estimation of genetic diversity based on morphologic and molecular data were used to construct dendograms. AMOVA was used to evaluate variability based on molecular data. Genetic diversity was estimated among and within morphologic and molecular data. SSR and AFLP markers showed efficient discrimination power between highly related genotypes. Significant correlation was found out between two molecular methods which showed more accurate estimate of genetic diversity than by agronomic and morphologic data.

  11. The protection of parsley seedlings (Petroselinum sativum Hoffm. ssp. microcarpum) against damping-off.

    Science.gov (United States)

    Nawrocki, J

    2006-01-01

    The experiment was carried out in the years 2003 and 2004 on parsley cultivar: 'Berlinska', 'Cukrowa', 'Vistula' and 'Kinga'. Mycological analysis of parsley seeds showed, that the most common inhabitans were fungi from genus Alternaria (mainly A. alternata and A. radicina) and Fusarium, especially F. avenaceum and F. oxysporum. The two-year study on the effectiveness of 5 substances--biopreparate Biochikol 020 PC (polymer of chitosol) and Biosept 33 SL (extract of grape-fruit); and fungicides: Amistar 250 SC (BAS azoxystrobin), Dithane M-45 80WP (mancozeb) and Zaprawa Funaben T (carbendazim+thiram) used against parsley damping-off was conducted in glasshouse and field conditions. Seeds of parsley were treated one of tested substances before sowing. The results of glasshouse experiments showed, that the best efficacy exibited Amistar and Zaprawa Funaben T for seedlings cultivar 'Berlińska' and 'Cukrowa' and Biochikol for 'Kinga'. During field experiments Zaprawa Funaben T showed the best efficacy for seedlings 'Berlińska' and 'Vistula'. Preparate Amistar was the best seed dressing for parsley cultivar 'Cukrowa' and 'Kinga'. During glasshouse experiments in control the highest number of decaying seedlings had cultivar 'Berlinska', in field experiments 'Kinga'. PMID:17390849

  12. Fecal and Salivary Cortisol Concentrations in Woolly (Lagothrix ssp. and Spider Monkeys (Ateles spp.

    Directory of Open Access Journals (Sweden)

    Kimberly D. Ange-van Heugten

    2009-01-01

    Full Text Available Detrimental physiological effects due to stressors can contribute to the low captive success of primates. The objective of this research was to investigate the potential impact of diet composition on cortisol concentrations in feces and saliva in woolly (n=27 and spider monkeys (n=61. The research was conducted in three studies: the first investigated spider monkeys in the United States, the second investigated spider monkeys within Europe, and the third investigated woolly monkeys within Europe. Fecal cortisol in spider monkeys in US zoos varied (P=.07 from 30 to 66 ng/g. The zoo with the highest fecal cortisol also had the highest salivary cortisol (P≤.05. For European zoos, fecal cortisol differed between zoos for both spider and woolly monkeys (P≤.05. Spider monkeys had higher fecal cortisol than woolly monkeys (P≤.05. Zoos with the highest dietary carbohydrates, sugars, glucose, and fruit had the highest cortisol. Cortisol was highest for zoos that did not meet crude protein requirements and fed the lowest percentage of complete feeds and crude fiber. Differences among zoos in housing and diets may increase animal stress. The lifespan and reproductive success of captive primates could improve if stressors are reduced and dietary nutrients optimized.

  13. Fecal and Salivary Cortisol Concentrations in Woolly (Lagothrix ssp.) and Spider Monkeys (Ateles spp.)

    NARCIS (Netherlands)

    Ange-van Heugten, K.D.; Heugten, van E.; Timmer, S.; Bosch, G.; Elias, A.; Whisnant, S.; Swarts, H.J.M.; Ferket, P.; Verstegen, M.W.A.

    2009-01-01

    Detrimental physiological effects due to stressors can contribute to the low captive success of primates. The objective of this research was to investigate the potential impact of diet composition on cortisol concentrations in feces and saliva in woolly (n=27) and spider monkeys (n=61). The research

  14. Application of multiple laboratory tests for Mycobacterium avium ssp. paratuberculosis detection in Crohn's disease patient specimens.

    Science.gov (United States)

    Banche, Giuliana; Allizond, Valeria; Sostegni, Raffaello; Lavagna, Alessandro; Bergallo, Massimiliano; Sidoti, Francesca; Daperno, Marco; Rocca, Rodolfo; Cuffini, Anna Maria

    2015-07-01

    The difficulties involved in detecting and enumerating Mycobacterium avium subsp. paratuberculosis (MAP) as a pathogen potentially involved in Crohn's disease (CD) are well known. This study aimed to improve this situation through the application of multiple laboratory diagnostic tests to detect and isolate this bacterium from different specimens collected from CD-patients and non-CD subjects as controls. A total of 120 samples (terminal ileum and colon biopsies, blood and stool) were obtained from 19 CD-patients and from 11 individuals who did not have a clinicopathological diagnosis of CD (non-CD controls) attending for ileocolonoscopy. All samples were processed by staining techniques, culture on both solid and liquid media, and Insertion Sequence 900/F57 real-time PCR. The MAP frequency in CD-patients was found in a significantly greater proportion than in non-CD subjects; the most positive samples were biopsies from CD-patients tested by real-time PCR. MAP detection in biopsies, and in the other samples, by applying multiple and validated laboratory diagnostic tests, could be a marker of active infection, supporting MAP involvement in CD. PMID:26147146

  15. Immunohistochemical analysis of pancreatic islets of platypus (Ornithorhynchus anatinus) and echidna (Tachyglossus aculeatus ssp.).

    Science.gov (United States)

    He, Chuan; Myers, Mark A; Forbes, Briony E; Grützner, Frank

    2015-04-01

    Monotremes have undergone remarkable changes to their digestive and metabolic control system; however, the monotreme pancreas remains poorly characterized. Previous work in echidna demonstrated the presence of pancreatic islets, but no information is available for platypus and the fine structure has not been described for either monotreme. Based on our recent finding that monotremes lack the ghrelin gene, which is expressed in mouse and human pancreatic islets, we investigated the structure of monotreme islets in more detail. Generally, as in birds, the islets of monotremes were smaller but greater in number compared with mouse. β-cells were the most abundant endocrine cell population in platypus islets and were located peripherally, while α-cells were observed both in the interior and periphery of the islets. δ-cells and pancreatic polypeptide (PP)-cells were mainly found in the islet periphery. Distinct PP-rich (PP-lobe) and PP-poor areas (non-PP-lobe) are present in therian mammals, and we identified these areas in echidna but not platypus pancreas. Interestingly, in some of the echidna islets, α- and β-cells tended to form two poles within the islets, which to our knowledge is the first time this has been observed in any species. Overall, monotreme pancreata share the feature of consisting of distinct PP-poor and PP-rich islets with other mammals. A higher number of islets and α- or β-cell only islets are shared between monotremes and birds. The islets of monotremes were larger than those of birds but smaller compared with therian mammals. This may indicate a trend of having fewer larger islets comprising several endocrine cell types during mammalian evolution. PMID:25682842

  16. Thermoelasticity of SSP Materials: An Integrated Ultrasonic and X-radiation Study

    Energy Technology Data Exchange (ETDEWEB)

    Baosheng Li

    2008-07-29

    It has been a very productive year for accomplishing the tasks outlined in the original proposal. Quite a few crystalline materials [tantalum (Ta), molybdenum (Mo), cerium (Ce) beryllium (Be)] and amorphous materials [zirconium tungstate (ZrW2O8), SiO2, and germanium diselenide (GeSe2) glasses] have been assessed at high pressures up to 12 GPa and acoustic velocities and densities have been obtained simultaneously using our unique technique. Major activities include sample preparation, high pressure cell assembly testing, and conducting ultrasonic and X-ray diffraction measurements at BNL as well as resonance ultrasonic spectroscopy (RUS) measurements at UCLA on appropriate samples. Sample preparations for Ce and Be were made at Los Alamos National Lab for which special grades and specialized machining of the sample are required. Pilot experiments for optimizing high pressure cell assemblies were conducted using the 1000-ton multi-anvil press (USCA-1000) in the High Pressure Lab at Stony Brook, and simultaneous ultrasonic and X-ray diffraction experiments were conducted using the DDIA apparatus installed at X17B2 of NSLS at BNL. New data analysis protocols have been developed for deriving density of amorphous materials at high pressure and therefore its equation of state. Following on previous years effort, attempts have been made to derive single crystal elastic constants based on the current measurements on polycrystalline samples at high pressure in conjunction with previous data as well as the current RUS measurements at ambient conditions. Single crystal elastic constants of Tantalum have been measured using RUS techniques at room pressure and high temperature. Educational and training opportunities have been provided for postdoctoral associate researchers, Drs. Wei Liu (project leader for Mo, and ZrW2O8 and SiO2 glass) and Qiong Liu (Ta project leader) and graduate students Mr. Matthew Whitaker (Project Ce and FeSi) and Sytle Antao (GeSe2 glass project). A total of 6 undergraduate students (2 summer students at Stony Brook University, and 4 undergraduates from Azusa Pacific University) participated in the experiments at various stages and benefited from the discussions about the science and research work conducted by our collaborators of the current project at DoE national labs.

  17. PENGEMBANGAN SUBJECT SPECIFIC PEDAGOGY (SSP) IPA TERPADU UNTUK MENINGKATKAN HASIL BELAJAR SISWA

    OpenAIRE

    Fitri Yuliawati

    2016-01-01

    Background of this research is the analysis of the results of interviews some junior secondary schools in Yogyakarta and the conclusion that teachers do not use an integrated science teaching and teachers still find difficulties in the application of learning science in an integrated manner. It can be influenced by several factors, such as the lack of reference used by teachers in presenting the material Integrated Science relevantly, most of science teachers are from educational background o...

  18. Rational Discovery of T Helper Epitopes Specific for Bovine Infections with Mycobacterium avium ssp paratuberculosis

    DEFF Research Database (Denmark)

    Lundegaard, Claus; Aagaard, C.; Ussery, David;

    2011-01-01

    Paratuberculosis, a chronic wasting disease in ruminants, is causing significant losses to both EU dairy and meat producers, due to a decreasing milk yield, loss of body weight and early replacements. The absence of adequate diagnostic tools for early detection of subclinically infected livestock...... goal is to combine positive responding peptides with new promising adjuvants in order to develop effective bovine MAP vaccines which do not cross react with traditional skin tests for M. bovis infections....

  19. Rapid turnover of the W chromosome in geographical populations of wild silkmoths, Samia cyntia ssp

    Czech Academy of Sciences Publication Activity Database

    Yoshido, A.; Šíchová, Jindra; Kubíčková, S.; Marec, František; Sahara, K.

    2013-01-01

    Roč. 21, č. 2 (2013), s. 149-164. ISSN 0967-3849 R&D Projects: GA AV ČR IAA600960925 Grant ostatní: Ministerstvo zemědělství(CZ) MZE 0002716202; Grant Agency of the Univeristy of South Bohemia(CZ) GAJU 137/2010/P; Japan Society for the Promotion of Science(JP) 19-1114; Japan Society for the Promotion of Science(JP) 23380030; Japan Society for the Promotion of Science(JP) 21-7147 Institutional support: RVO:60077344 Keywords : fluorescence in situ hybridisation * heterochromatin * insects Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 2.688, year: 2013 http://link.springer.com/content/pdf/10.1007%2Fs10577-013-9344-1.pdf

  20. Full Scale Test of a SSP 34m box girder 1. Data report

    DEFF Research Database (Denmark)

    Jensen, Find Mølholt; Branner, Kim; Nielsen, Per Hørlyk;

    surface deformation. A prediction was made on the location of the failure of the girder. At this location the majority of the measuring equipment was concentrated. The prediction was proved to be correct and valuable information of the behaviour of the box girder prior to failure was obtained......This report presents the setup and result of a full-scale test of a reinforced glass fibre/epoxy box girder used in 34m wind turbine blade. The tests were performed at the Blaest test facility in August 2006. The test is an important part of a research project established in cooperation between...... the box girder was loaded until failure. A comprehensive description of the test setup is given. This report deals only with tests and results. There are no conclusions on the data in this report, but references are given to publications, where the data are used and compared with FEM etc. Various kinds...

  1. Hairy Root Induction in Linum mucronatum ssp. mucronatum, an Anti-Tumor Lignans Producing Plant

    Directory of Open Access Journals (Sweden)

    Afsaneh SAMADI

    2012-05-01

    Full Text Available Transgenic hairy root system is a promising source of secondary metabolites in medicinal plants with high pharmaceutical value.For the first time, hairy roots were established in different explants of Linum mucronatum, an anti-cancer agent producing plant, via amikimopine type strain of Agrobacterium rhizogenes, ‘A13’. The percentage of hairy root induction varied from 0 to 60% depended onthe explants and hypocotyl (including cotyledonary node explants were found to be highly susceptible to A. rhizogenes infection withthe highest (60% rate of hairy root induction. four different Murashige and Skoog (MS-based liquid culture media were used for wellestablishment of hairy roots. Hairy root growth medium D (HRGM-D containing hormone-free MS basal medium with an extra oneday pre-incubation period at 35°C was found to be more efficient for profuse growth (fresh weight; 8500 mg per 25 ml culture mediumof hairy roots. Hairy root system presented in this study may offer a suitable platform for optimization and production of satisfactorylevel of aryltetralin lignans like podophyllotoxin and its derivatives from L. mucronatum.

  2. Evaluation and characterization in bananas (Musa ssp.) at the USDA-ARS Tropical Agriculture Research Station

    Science.gov (United States)

    Banana, Musa spp., is a key horticultural crop in tropical regions of the world where they provide sustenance and serve as cash crops. The plantain subgroup in particular, is an important staple in the Caribbean, Central America and some countries in South America. One of the integral research comp...

  3. Wie wirken "effektive Mikroorganismen" auf EM-Bokashi in der Bananenproduktion (Musa ssp.)?

    OpenAIRE

    Formowitz, B.; Elango, F.; Okumoto, S.; Buerkert, A.; Müller, T

    2005-01-01

    In Costa Rica, ‘effective microorganisms’ (EM) are used to produce organic fertiliser in the form of Bokashi. This study aimed at investigating the effects of EM addition on the decomposition of banana residues during Bokashi production in comparison to different non-EM control variants (Bokashi produced with: W= water, M= molasses as an EM additive, EMst= sterilized EM). Furthermore, the effects of the above mentioned Bokashi variants on the growth of young banana plants and their effects on...

  4. Job analysis and job satisfaction : case Hello Cafe and SSP Finland Ltd

    OpenAIRE

    Boulanger, Julien

    2013-01-01

    The objective of this research was to study the relationship between job analysis and job satisfaction by using a qualitative research method. This study is based on a company case. The main problem with the Hello Cafe concept was that the employees were stressed and unsatisfied with the organisation of the work flow and this resulted in a lack of quality in customer service and inefficiency at work. These problems were related to the missing job analysis charts and job descriptions. There...

  5. Mutation breeding for durum wheat (Triticum turgidum ssp. durum Desf.) improvement in Italy

    International Nuclear Information System (INIS)

    In view of the economic importance of durum wheat in Italy and in the Mediterranean and Near East Region much effort was devoted to its genetic improvement. Lodging susceptibility and straw weakness, particularly under high fertilizer level, were the main reasons of substantially lower yields compared to bread wheat. An experimental mutagenesis programme was started in Italy in 1956 by F. D'Amato and G.T. Scarascia. It included both fundamental genetic studies and applied mutation breeding. Remarkable results were obtained at the 'Laboratorio Applicazioni in Agricoltura', Casaccia Nuclear Research Center, Roma, Italy, in radiobiology, radiogenetics, cytology and cytogenetics, genetics and breeding. Selection among some 1,000 induced mutants and hybridization led to 11 registered mutant varieties, six by the direct use of selected mutants and the remaining from cross-breeding. The economic benefits derived from the developed mutant cultivars are substantial. Mutant varieties have a great impact on durum wheat production, both in Italy and other countries like Bulgaria or Austria where Italian mutants have been used successfully in cross-breeding. (author)

  6. SEROTYPES AND ANTIMICROBIAL RESISTANCE OF SALMONELLA ENTERICA SSP IN CENTRAL THAILAND, 2001-2006

    DEFF Research Database (Denmark)

    Pantip, Sirichote; Aroon, B.; Kanokwan, Tienmanee; Akawat, Unahaleka; Amornrat, Uhright; Patchree, Chittaphithakchai; Wachirapa, Keawrod; Hendriksen, Rene S.

    2010-01-01

    This study was carried out to elucidate the epidemiological trends and antimicrobial susceptibilities against Salmonella serovars among Thai patients and asymptomatic carriers during 2001-2006 in central Thailand. A total of 1,401 human and 260 non-human isolates from various sources were included....... Choleraesuis, S. Enteritidis, S. Typhimurium, and S. Typhi. Children under five years old suffered the most frequently from gastroenteritis. The patients most commonly infected with an invasive serovar were children and people from 26 to 55 years of age. Antimicrobial susceptibility data revealed that S....... Schwarzengrund, S. Choleraesuis, S. Anatum, S. Stanley, S. Rissen, and S. Typhimurium were the most resistant serovars observed. The invasive serovar, S. Choleraesuis was resistant to cefotaxime and norfloxacin. Antimicrobial resistance to cefotaxime, was observed in S. Agona, S. Rissen, S. Typhimurium, S...

  7. Morphological characterization and genetic diversity in lentil (Lens culinaris medikus ssp. Culinaris germplasm

    Directory of Open Access Journals (Sweden)

    K.U. Ahamed

    2014-06-01

    Full Text Available Genetic divergence of 110 lentil germplasm with checks was assessed based on morphological traits using multivariate analysis. Mahalanobis generalized distance (D2 analysis was used to group the lentil genotypes. Significant variations among lentil genotypes were observed in respect of days to 1st flowering, days to 50% flowering, days to maturity, plant height, and number of pods per peduncle, number of pods per plant, number of seeds per plant, 100 seed weight and yield per plant. Considering the mean values, the germplasm were grouped into ten clusters. The highest number of genotypes (17 was in cluster X and lowest (5 both in cluster II and IV. Cluster IV had the highest cluster mean for number of pods per plant (297.08, number of seeds per plant (594.16, 100 seed weight (1.44 g and yield per plant (8.53 g. Among them, the highest inter-cluster distance was obtained between the cluster IV and I (24.61 followed by IV and III (22.33, while the lowest was between IX and II (1.63. The maximum value of inter-cluster distance indicated that genotypes belonging to cluster IV were far diverged from those of cluster I. The first female flower initiation was earlier in BD-3812 (49 days in cluster I and cluster IV had highest grain yield per plant (8.53. BD-3807 produced significant maximum number of pods per plant (298.40 in cluster IV.

  8. Induction and purification of chitinase in Brassica napus L. ssp. oleifera infected with Phoma lingam

    DEFF Research Database (Denmark)

    Rasmussen, U.; Giese, H.; Dalgaard Mikkelsen, J.

    1992-01-01

    after tryptic digestion of the protein shows high sequence similarity to basic chitinases from bean, tobacco, potato, Arabidopsis, barley and rice, as well as to acidic chitinases from tobacco and petunia. A close serological relationship was found between the chitinase isoenzyme and an isoenzyme from...

  9. Breeding and improvement of quality traits in alfalfa (Medicago sativa ssp. sativa L.

    Directory of Open Access Journals (Sweden)

    Milić Dragan

    2014-01-01

    Full Text Available An important objective in alfalfa breeding is the improvement of forage quality. The aim of this experiment was to determine the genetic control of the most important quality traits in whole plant leaves and stems of alfalfa genotypes. Quantitative genetic parameters were estimated for crude protein (CP, neutral detergent fiber (NDF, acid detergent fiber (ADF and acid detergent lignin (ADL content. A 5x5 diallel design with reciprocals among parents from geographically different populations were studied. In the diallel study, effects due to general combining ability (GCA were higher than those due to specific combining ability (SCA for majority of the tested characters in analyses of whole plant. The F1 progeny effect was significant for almost all characters (except ADF content. The highest values of narrow sense heritability’s were found for NDF (h =0.19 and CP (h =0.17 in whole plant, and in leaves (0.11 and 0.08, while in stems most heritable traits are ADF (h = 0.29 and ADL (h = 0.16 content. As a consequence, CP, NDF and ADF content would be more efficient selection criteria in whole plant analyses, while ADF and ADL content would be more interesting to investigate in stems, in a breeding program for improved nutritive value of alfalfa. [Projekat Ministarstva nauke Republike Srbije, br. TR 31024

  10. Acoustic divergence in the communication of cryptic species of nocturnal primates (Microcebus ssp.

    Directory of Open Access Journals (Sweden)

    Zimmermann Elke

    2008-05-01

    Full Text Available Abstract Background A central question in evolutionary biology is how cryptic species maintain species cohesiveness in an area of sympatry. The coexistence of sympatrically living cryptic species requires the evolution of species-specific signalling and recognition systems. In nocturnal, dispersed living species, specific vocalisations have been suggested to act as an ideal premating isolation mechanism. We studied the structure and perception of male advertisement calls of three nocturnal, dispersed living mouse lemur species, the grey mouse lemur (Microcebus murinus, the golden brown mouse lemur (M. ravelobensis and the Goodman's mouse lemur (M. lehilahytsara. The first two species occur sympatrically, the latter lives allopatrically to them. Results A multi-parameter sound analysis revealed prominent differences in the frequency contour and in the duration of advertisement calls. To test whether mouse lemurs respond specifically to calls of the different species, we conducted a playback experiment with M. murinus from the field using advertisement calls and alarm whistle calls of all three species. Individuals responded significantly stronger to conspecific than to heterospecific advertisement calls but there were no differences in response behaviour towards statistically similar whistle calls of the three species. Furthermore, sympatric calls evoked weaker interest than allopatric advertisement calls. Conclusion Our results provide the first evidence for a specific relevance of social calls for speciation in cryptic primates. They furthermore support that specific differences in signalling and recognition systems represent an efficient premating isolation mechanism contributing to species cohesiveness in sympatrically living species.

  11. The potential Public Health Impact of Mycobacterium avium ssp. paratuberculosis: Global Opinion Survey of Topic Specialists.

    Science.gov (United States)

    Waddell, L A; Rajić, A; Stärk, K D C; McEwen, S A

    2016-05-01

    Global research knowledge has accumulated over the past few decades, and there is reasonable evidence for a positive association between Mycobacterium avium spp. paratuberculosis and Crohn's disease in humans, although its role as a human pathogen has not been entirely accepted. For this reason, management of public health risk due to M. paratuberculosis remains an important policy issue in agri-food public health arenas in many countries. Responsible authorities must decide whether existing mitigation strategies are sufficient to prevent or reduce human exposure to M. paratuberculosis. A Web-based questionnaire was administered to topic specialists to elicit empirical knowledge and opinion on the overall public health impact of M. paratuberculosis, the importance of various routes of human exposure to the pathogen, existing mitigation strategies and the need for future strategies. The questionnaire had four sections and consisted of 20 closed and five open questions. Topic specialists believed that M. paratuberculosis is likely a risk to human health (44.8%) and, given the paucity of available evidence, most frequently ranked it as a moderate public health issue (40.1%). A significant correlation was detected between topic specialists' commitment to M. paratuberculosis in terms of the number of years or proportion of work dedicated to this topic, and the likelihood of an extreme answer (high or low) to the above questions. Topic specialists identified contact with ruminants and dairy products as the most likely routes of exposure for humans. There was consensus on exposure routes for ruminants and what commodities to target in mitigation efforts. Described mandatory programmes mainly focused on culling diseased animals and voluntary on-farm prevention programmes. Despite ongoing difficulties in the identification of subclinical infections in animals, the topic specialists largely agreed that further enhancement of on-farm programmes in affected commodities by the agri-food industry (68.4%) and allocation of resources by governments to monitor the issue (92%) are most appropriate given the current state of evidence. PMID:26272619

  12. Bio-efficacy of the essential oil of oregano (Origanum vulgare Lamiaceae. Ssp. Hirtum).

    Science.gov (United States)

    Grondona, Ezequiel; Gatti, Gerardo; López, Abel G; Sánchez, Leonardo Rodolfo; Rivero, Virginia; Pessah, Oscar; Zunino, María P; Ponce, Andrés A

    2014-12-01

    The aim of this study was to investigate the bioactivity of the essential oil isolated from Origanum vulgare L. (EOv). We analyzed the in vivo anti-inflammatory properties in a mouse-airway inflammation model and the in vitro antimicrobial activity, genotoxicity over the anaphase-telophase with the Allium cepa strain and its cytotoxicity/viability in A549 culture cells. In vivo, EOv modified the levels of tumor necrosis factor -α and viable activated macrophages and was capable to mitigate the effects of degradation of conjugated dienes. In vitro, EOv reduced the viability of cultured A549 cells as well as the mitotic index and a number of chromosomal aberrations; however, it did not change the number of phases. We found that EOv presents antimicrobial activity against different Gram (-) and (+) strains, measured by disc-diffusion test and confirmed with a more accurate method, the AutoCad software. We postulate that EOv presents antibacterial, antioxidant and chemopreventive properties and could be play an important role as bioprotector agent. PMID:25266989

  13. Identification of Yellow Pigmentation Genes in Brassica rapa ssp. pekinensis Using Br300 Microarray

    Directory of Open Access Journals (Sweden)

    Hee-Jeong Jung

    2014-01-01

    Full Text Available The yellow color of inner leaves in Chinese cabbage depends on its lutein and carotene content. To identify responsible genes for yellow pigmentation in leaves, the transcriptome profiles of white (Kenshin and yellow leaves (Wheessen were examined using the Br300K oligomeric chip in Chinese cabbage. In yellow leaves, genes involved in carotene synthesis (BrPSY, BrPDS, BrCRTISO, and BrLCYE, lutein, and zeaxanthin synthesis (BrCYP97A3 and BrHYDB were upregulated, while those associated with carotene degradation (BrNCED3, BrNCED4, and BrNCED6 were downregulated. These expression patterns might support that the content of both lutein and total carotenoid was much higher in the yellow leaves than that in the white leaves. These results indicate that the yellow leaves accumulate high levels of both lutein and β-carotene due to stimulation of synthesis and that the degradation rate is inhibited. A large number of responsible genes as novel genes were specifically expressed in yellow inner leaves, suggesting the possible involvement in pigment synthesis. Finally, we identified three transcription factors (BrA20/AN1-like, BrBIM1, and BrZFP8 that are specifically expressed and confirmed their relatedness in carotenoid synthesis from Arabidopsis plants.

  14. Final Critical Habitat for the Colorado Butterfly Plant (Gaura neomexicana ssp.coloradensis)

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — These data identify, in general, the areas where final critical habitat for the Desert yellowhead (Yermo xanthocephalus) occur. The geographic extent includes...

  15. Thermoelasticity of SSP Materials: An Integrated Ultrasonic and X-radiation Study

    International Nuclear Information System (INIS)

    It has been a very productive year for accomplishing the tasks outlined in the original proposal. Quite a few crystalline materials [tantalum (Ta), molybdenum (Mo), cerium (Ce) beryllium (Be)] and amorphous materials [zirconium tungstate (ZrW2O8), SiO2, and germanium diselenide (GeSe2) glasses] have been assessed at high pressures up to 12 GPa and acoustic velocities and densities have been obtained simultaneously using our unique technique. Major activities include sample preparation, high pressure cell assembly testing, and conducting ultrasonic and X-ray diffraction measurements at BNL as well as resonance ultrasonic spectroscopy (RUS) measurements at UCLA on appropriate samples. Sample preparations for Ce and Be were made at Los Alamos National Lab for which special grades and specialized machining of the sample are required. Pilot experiments for optimizing high pressure cell assemblies were conducted using the 1000-ton multi-anvil press (USCA-1000) in the High Pressure Lab at Stony Brook, and simultaneous ultrasonic and X-ray diffraction experiments were conducted using the DDIA apparatus installed at X17B2 of NSLS at BNL. New data analysis protocols have been developed for deriving density of amorphous materials at high pressure and therefore its equation of state. Following on previous years effort, attempts have been made to derive single crystal elastic constants based on the current measurements on polycrystalline samples at high pressure in conjunction with previous data as well as the current RUS measurements at ambient conditions. Single crystal elastic constants of Tantalum have been measured using RUS techniques at room pressure and high temperature. Educational and training opportunities have been provided for postdoctoral associate researchers, Drs. Wei Liu (project leader for Mo, and ZrW2O8 and SiO2 glass) and Qiong Liu (Ta project leader) and graduate students Mr. Matthew Whitaker (Project Ce and FeSi) and Sytle Antao (GeSe2 glass project). A total of 6 undergraduate students (2 summer students at Stony Brook University, and 4 undergraduates from Azusa Pacific University) participated in the experiments at various stages and benefited from the discussions about the science and research work conducted by our collaborators of the current project at DoE national labs

  16. Status of the amphipod Diporeia ssp. in coastal waters of the Laurentian Great Lakes

    Science.gov (United States)

    Diporeia has historically been the dominant benthic macroinvertebrate in deeper waters of the Laurentian Great Lakes, and its abundance has been proposed as an indicator of ecological condition. In 2010, the USEPA incorporated the Great Lakes into the National Coastal Condition A...

  17. Rozšíření vybraných druhů z čeledi plavuňovité v CHKO Jizerské hory

    OpenAIRE

    Titěra, Jan

    2014-01-01

    ABSTRACT In this bachelor thesis the occurence of five lycopod species (Lycopodium clavatum, L. annotinum, Huperzia selago, Lycopodiella inundata and Diphasiastrum alpinum) in the Jizerské hory Protected Landscape Area was mapped and analysed. Population, abundance, main habitat conditions and altitude of the species were recorded in the whole studied area. Records localities from other sources, namely especially from data of Richard Višňák was also supplemented from mapped habitat...

  18. ALKALOIDS OF THE SEDUM ACRE-GROUP (CRASSULACEAE)

    NARCIS (Netherlands)

    STEVENS, JF; THART, H; HENDRIKS, H; MALINGRE, TM

    1993-01-01

    The 16 species of the Sedum acre-group were investigated for the presence of alkaloids. They are S. acre of S. ser. Acria, S. alpestre, S. annuum, S. apoleipon, S. borissovae, S. euxinum, S. grisebachii, S. laconicum, S. multiceps, S. sexangulare, S. tuberiferum, S. tuberosum, S. ursi, and S. urvill

  19. Low level of gene flow from cultivated beets (¤Beta vulgaris¤ L. ssp. ¤vulgaris¤) into Danish populations of sea beet (¤Beta vulgaris¤ L. ssp. ¤maritima¤ (L.) Arcangeli)

    DEFF Research Database (Denmark)

    Andersen, N.S.; Siegismund, H.R.; Meyer, V.; Bagger Jørgensen, Rikke

    2005-01-01

    Gene flow from sugar beets to sea beets occurs in the seed propagation areas in southern Europe. Some seed propagation also takes place in Denmark, but here the crop-wild gene flow has not been investigated. Hence, we studied gene flow to sea beet populations from sugar beet lines used in Danish...... with cultivated beet in one of the sea beet populations from the centre of the Danish seed propagation area. Triploid hybrids found in this population were verified with flow cytometry. Possible hybrids or introgressed plants were also found in the French and Italian populations. However, individual...

  20. Sensory acceptance tests of red beet (Beta vulgaris ssp. vulgaris L.), cv. Early Wonder, minimally processed and irradiated; Testes sensoriais de aceitacao da beterraba vermelha (Beta vulgaris ssp. vulgaris L.), cv. Early Wonder, minimamente processada e irradiada

    Energy Technology Data Exchange (ETDEWEB)

    Hernandes, Nilber Kenup; Vital, Helio de Carvalho, E-mail: nilberkenup@ctex.eb.b [Centro Tecnologico do Exercito (CTEx), Rio de Janeiro, RJ (Brazil). Secao de Defesa Nuclear; Coneglian, Regina Celi Cavestre [Universidade Federal Rural do Rio de Janeiro (UFRRJ), Rio de Janeiro, RJ (Brazil). Inst. de Agronomia. Dept. de Fitotecnia; Godoy, Ronoel Luiz de Oliveira; Freire Junior, Murillo [EMBRAPA Agroindustria de Alimentos, Rio de Janeiro, RJ (Brazil)

    2007-08-15

    Red beet (Early Wonder) was cultivated in an experimental area of the Department of Fitotecnia at the Institute of Agronomy at the Rural Federal University of Rio de Janeiro. After harvest, the roots were minimally processed; packed; exposed to different doses of gamma radiation (0; 0.5; 1.0 and 1.5 kGy) and stored for 20 days at 8.0 deg C. Sensory evaluations were performed 1; 9; 13 and 20 days after irradiation by 12 testers who rated the overall appearance and aroma on a hedonic scale. The results indicated that the irradiated samples remained within the limit of acceptance for 20 days. In addition, the aroma was found to be a more sensitive indicator of the effect of different doses of radiation to the acceptance of the product. (author)

  1. Blood Groups in the Species Survival Plan®, European Endangered Species Program, and Managed in situ Populations of Bonobo (Pan paniscus), Common Chimpanzee (Pan troglodytes), Gorilla (Gorilla ssp.), and Orangutan (Pongo pygmaeus ssp.)

    OpenAIRE

    Gamble, Kathryn C.; Moyse, Jill A.; Lovstad, Jessica N.; Ober, Carole B.; Thompson, Emma E.

    2010-01-01

    Blood groups of humans and great apes long have been considered similar although are not interchangeable between species. In this study, human monoclonal antibody technology was used to assign human ABO blood groups to whole blood samples from great apes housed in North American and European zoos and in situ managed populations, as a practical means to assist blood transfusion situations for these species. From a subset of each of the species (bonobo, common chimpanzee, gorilla, and orangutan...

  2. Avaliação biomecânica de atividades de produção de mudas de Eucalyptus ssp. Biomechanical evaluation of activities of Eucalyptus ssp. seedling production

    Directory of Open Access Journals (Sweden)

    José Urbano Alves

    2006-06-01

    Full Text Available A pesquisa foi desenvolvida a partir de dados coletados em viveiro florestal, no Vale do Rio Doce, MG, com o objetivo de avaliar a biomecânica de atividades de produção de mudas de Eucalyptus spp. Essa avaliação foi realizada através da análise bidimensional utilizando-se a técnica de gravação em videoteipe, sendo os movimentos "congelados" para medição dos ângulos dos diversos segmentos corpóreos. As forças envolvidas foram medidas para aplicação do modelo biomecânico bidimensional de predição de posturas e forças estáticas, por meio de programa computacional desenvolvido pela Universidade de Michigan, dos Estados Unidos. O transporte manual de mudas utilizando carrinho foi a única atividade que apresentou força de compressão do disco da coluna acima da carga-limite superior; e todas as atividades avaliadas ultrapassaram essa carga, recomendada em pelo menos uma fase do ciclo e em pelo menos uma articulação.This study was based on data collected in a nursery located in the municipality of Rio Doce, MG, to evaluate the biomechanics of activities of Eucalyptus spp seedling production. The evaluation was carried out by the bidimensional analysis with the use of the videotape recording technique, with the images of movements frozen to measure the angles of the several body segments. The involved forces were measured in order to apply the biomechanical bidimensional model for the prediction of postures and static forces, using a software developed by the University of Michigan, US. The seedling transport with a pushcart was the only activity presenting compression force on the spinal disc above the superior load limit; and all the studied activities surpassed the load limit recommended in at least one phase of the cycle and in at least one articulation.

  3. Neonatal colonization by Bifidobacterium longum ssp. longum RB 25P strain suppresses sensitization in mice model of birch pollen allergy

    Czech Academy of Sciences Publication Activity Database

    Doušková, Dagmar; Schwarzer, Martin; Kozáková, Hana

    Kysucke Nove Mesto: Pamida International, 2010. s. 111-111. ISBN 978-80-970168-4-5 R&D Projects: GA AV ČR IAA500200710; GA MŠk 2B06053 Institutional research plan: CEZ:AV0Z50200510 Keywords : birch pollen allergy Subject RIV: EC - Immunology

  4. AKUMULASI KROMIUM (Cr PADA DAGING IKAN NILA MERAH (Oreochromis ssp. DALAM KARAMBA JARING APUNG DI SUNGAI WINONGO YOGYAKARTA

    Directory of Open Access Journals (Sweden)

    RI Handayani

    2015-07-01

    Full Text Available Sungai Winongo merupakan salah satu sungai penting di Yogyakarta, karena berperan dalam menunjang dan memenuhi kebutuhan hidup masyarakat sekitarnya. Tujuan penelitian ini adalah mengetahui kandungan logam berat kromium (Cr pada air dan daging ikan nila merah di Sungai Winongo Yogyakarta serta mengetahui kelayakannya untuk dikonsumsi. Penelitian menggunakan rancangan eksplorasi dengan metode survai, dengan penetapan pengambilan sampel menggunakan teknik Purposive Random Sampling. Metode analisis uji kandungan logam berat Cr pada air dan ikan nila merah menggunakan AAS. Konsentrasi Cr pada air di Sungai Winongo Yogyakarta adalah 0,0213 mg/L, nilai ini masih berada di bawah ambang batas yang sudah ditetapkan PPRI No. 82 Tahun 2001 yakni  sebesar 0,05 mg/L. Pada ikan nila merah diketahui akumulasi tertinggi pada stasiun 1 sebesar 10,2265 mg/Kg; kemudian pada stasiun 3 dan 2 sebesar 9,81075 mg/Kg dan 9,2245 mg/Kg. Nilai ini melebihi baku mutu yang sudah ditetapkan oleh Dirjen POM 1989 yakni sebesar 2,5 mg/Kg. Simpulan dari penelitian ini adalah kandungan Cr dalam air masih di bawah ambang batas. Ikan nila merah di sungai Winongo sudah mengakumulasi Cr di atas ambang batas, sehingga tidak layak konsumsi.Winongo river is one of the important rivers in Yogyakarta because this supports and fulfils the people’s needs. The purpose of this study was to determine the heavy metal content of Cr in water and red tilapia fish meat captured in Winongo Yogyakarta and to know whether the meat is edible or not. The study design was used exploration design with survey method, in which the determination of sampling was using purposive random sampling. Method of test analysis of heavy metals Cr in water and red tilapia was using AAS. Chromium concentration in water of Winongo river was 0.0213 mg/l, this value remains below the threshold set by PPRI No. 82 year 2001 which was 0.05 mg/L, the highest accumulation of Cr in red tilapia meat was at station 1 i.e. 10.2265 mg/Kg; followed by station 3 and 2 by 9.8108 mg/Kg and 9.2245 mg/Kg, respectively. Thiese values exceed the standard quality set forth by the Director General of POM in 1989 i.e. 2.5 mg/Kg. The conclusion was that Cr content in the water is still below the threshold but Tilapia fishes in Winongo river accumulated Cr above the threshold, so that people better not consume red tilapia fish.

  5. Genomic Analyses Reveal Demographic History and Temperate Adaptation of the Newly Discovered Honey Bee Subspecies Apis mellifera sinisxinyuan n. ssp.

    Science.gov (United States)

    Chen, Chao; Liu, Zhiguang; Pan, Qi; Chen, Xiao; Wang, Huihua; Guo, Haikun; Liu, Shidong; Lu, Hongfeng; Tian, Shilin; Li, Ruiqiang; Shi, Wei

    2016-05-01

    Studying the genetic signatures of climate-driven selection can produce insights into local adaptation and the potential impacts of climate change on populations. The honey bee (Apis mellifera) is an interesting species to study local adaptation because it originated in tropical/subtropical climatic regions and subsequently spread into temperate regions. However, little is known about the genetic basis of its adaptation to temperate climates. Here, we resequenced the whole genomes of ten individual bees from a newly discovered population in temperate China and downloaded resequenced data from 35 individuals from other populations. We found that the new population is an undescribed subspecies in the M-lineage of A. mellifera (Apis mellifera sinisxinyuan). Analyses of population history show that long-term global temperature has strongly influenced the demographic history of A. m. sinisxinyuan and its divergence from other subspecies. Further analyses comparing temperate and tropical populations identified several candidate genes related to fat body and the Hippo signaling pathway that are potentially involved in adaptation to temperate climates. Our results provide insights into the demographic history of the newly discovered A. m. sinisxinyuan, as well as the genetic basis of adaptation of A. mellifera to temperate climates at the genomic level. These findings will facilitate the selective breeding of A. mellifera to improve the survival of overwintering colonies. PMID:26823447

  6. Persistent organic pollutants in the blood of free-ranging sea otters (Enhydra lutris ssp.) in Alaska and California

    Science.gov (United States)

    Jessup, David A.; Johnson, Christine K.; Estes, James; Carlson-Bremer, Daphne; Jarman, Walter M.; Reese, Stacey; Dodd, Erin; Tinker, M. Tim; Ziccardi, Michael H.

    2010-01-01

    As part of tagging and ecologic research efforts in 1997 and 1998, apparently healthy sea otters of four age-sex classes in six locations in Alaska and three in California were sampled for persistent organic pollutants (POPs) and other chemicals of ecologic or environmental concern (COECs). Published techniques for the detection of POPs (specifically Σpolychlorinated biphenyls [PCBs], ΣDDTs, Σhexachlorocyclohexanes [HCHs], Σpolycyclic aromatic hydrocarbons [PAHs], Σchlordanes [CHLs], hexachlorobenzene [HCB], dieldrin, and mirex) in the tissue of dead otters were modified for use with serum from live sea otters. Toxic equivalencies (TEQs) were calculated for POPs with proven bioactivity. Strong location effects were seen for most POPs and COECs; sea otters in California generally showed higher mean concentrations than those in Alaska. Differences in contaminant concentrations were detected among age and sex classes, with high levels frequently observed in subadults. Very high levels of ΣDDT were detected in male sea otters in Elkhorn Slough, California, where strong freshwater outflow from agricultural areas occurs seasonally. All contaminants except mirex differed among Alaskan locations; only ΣDDT, HCB, and chlorpyrifos differed within California. High levels of ΣPCB (particularly larger, more persistent congeners) were detected at two locations in Alaska where associations between elevated PCBs and military activity have been established, while higher PCB levels were found at all three locations in California where no point source of PCBs has been identified. Although POP and COEC concentrations in blood may be less likely to reflect total body burden, concentrations in blood of healthy animals may be more biologically relevant and less influenced by state of nutrition or perimortem factors than other tissues routinely sampled.

  7. Stereoselective uptake and distribution of the chiral neonicotinoid insecticide, Paichongding, in Chinese pak choi (Brassica campestris ssp. chinenesis)

    International Nuclear Information System (INIS)

    Highlights: • Absorption of foliar applied Paichongding by pak choi was not stereoselective. • Foliar uptake and downward transport of Paichongding were both found in pak choi. • Enantioselective and epimer-selective root uptake were observed for Paichongding. • Foliage/root uptake showed diastereoselective transport of Paichongding epimers. • The SR and RS are more easily taken up by roots and accumulated in edible parts. -- Abstract: Neonicotinoid chiral insecticidal Paichongding is a promising substitute for the widely used imidacloprid. Four stereoisomers of Paichongding, 5R,7R, 5S,7S, 5S,7R and 5R,7S, were employed in both foliage and roots of Chinese pak choi to investigate their stereoselective uptake and distribution in pak choi. Results showed that after foliar application, no stereoselective absorption into pak-choi plants was observed among the enantiomers. Total absorptions were 35.40% of the applied amount for 5R,7R, 36.66% for 5S,7S, 36.80% for 5S,7R and 38.20% for 5R,7S at 96 HAT. The translocation of the four absorbed stereoisomers within pak choi occurred both acropetally and basipetally and the transport of 14C from enantiomers 5R,7R and 5S,7S were significantly higher than for 5R,7S and 5S,7R. Significant stereoselective translocation inside plants was observed between Paichongding epimers. Total root uptake reached 16.49–19.85% for 5R,7R and 5S,7S, and 24.57–28.82% for 5S,7R and 5R,7S at 144 HAT. Both enantioselective and diastereoselective root uptake into pak-choi occurred between the four stereoisomers. The 5R,7S and 5S,7R enantiomers were more readily uptaken by the roots than 5R,7R and 5S,7S and accumulated in the edible leaves. These results will help to develop an understanding of Paichongding using only the target-active enantiomer of pesticides

  8. AFLP Marker Linked to Turnip Mosaic Virus Susceptible Gene in Chinese Cabbage (Brassica rapa L.ssp.pekinensis)

    Institute of Scientific and Technical Information of China (English)

    HAN He-ping; SUN Ri-fei; ZHANG Shu-jiang; LI Fei; ZHANG Shi-fan; NIU Xin-ke

    2004-01-01

    Turnip mosaic virus (TuMV) which has several strains causes the most important virusdisease in Chinese cabbage in terms of crop damage. In China, Chinese cabbage is infectedby a mixture of strains, breeding of cultivar for the TuMV resistance has become themajor aim. Screening the molecular marker linked to the TuMV-resistance gene formolecular assisted selection is the major method to improve the breeding efficiency. Inthis study, we used AFLP technique and the method of bulked segregant analysis(BSA) tostudy the progeny of Brp0058 x Brp0108, and identified two DNA molecular marker linked toTurnip mosaic virus-resistance gene with a recombination frequency 7.5 cM and 8.4 cM.

  9. Development and Characterization of Microsatellite Markers in Brassica rapa ssp.chinensis and Transferability Among Related Species

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    Simple sequence repeat (SSR) or microsatellite marker is a valuable tool for several purposes, such as mapping, fingerprinting,and breeding.In the present study, an inter-simple sequence repeat (ISSR)-PCR technique was applied for developing SSR markers in non-heading Chinese cabbage (Brassica rapa). A total of 190 SSRs were obtained. Among these, AG or CT (54.7%) was the most frequent repeat, followed by AC or GT (31.6%) of the microsatellites. The average number of the SSRs length array was 16 and 10 times, respectively. Based on the determined SSR sequences, 143 SSR primer pairs were designed to evaluate their transferabilities among the related species of Brassica. The number of alleles produced per marker averaged 2.91, and the polymorphism information content (PIC) value ranged from 0 to 0.863 with an average of 0.540. Monomorphism was observed in 16 primer pairs. The transferability percentage in CC genome was higher than in BB genome. More loci occurred in the BBCC genome. This result supported the hypothesis that BB genome was divergent from A and C genomes, and AA and CC genomes were relatively close. The polymorphic primers can be exploited for further evolution, fingerprinting, and variety identification.

  10. Propagation of internal errors in explicit Runge–Kutta methods and internal stability of SSP and extrapolation methods

    KAUST Repository

    Ketcheson, David I.

    2014-04-11

    In practical computation with Runge--Kutta methods, the stage equations are not satisfied exactly, due to roundoff errors, algebraic solver errors, and so forth. We show by example that propagation of such errors within a single step can have catastrophic effects for otherwise practical and well-known methods. We perform a general analysis of internal error propagation, emphasizing that it depends significantly on how the method is implemented. We show that for a fixed method, essentially any set of internal stability polynomials can be obtained by modifying the implementation details. We provide bounds on the internal error amplification constants for some classes of methods with many stages, including strong stability preserving methods and extrapolation methods. These results are used to prove error bounds in the presence of roundoff or other internal errors.

  11. HPLC-MS(n) Identification of Betalain Profile of Different Beetroot (Beta vulgaris L. ssp. vulgaris) Parts and Cultivars.

    Science.gov (United States)

    Slatnar, Ana; Stampar, Franci; Veberic, Robert; Jakopic, Jerneja

    2015-09-01

    The distribution of betalains in peel, flesh, and petioles of yellow and red beetroot cultivars has been investigated using an High-performance liquid chromatography (HPLC) system with electrospray mass spectrometry. Differences in the levels of betacyanins and betaxanthins between different colored cultivars were individually determined for 3 plant parts. The content of almost all analyzed compounds decreased in the following order: peel > flesh > petiole. Betanin/isobetanin pigments comprised a major portion of the relative peak area measured in red beetroot peel. Isobetanin relative peak areas were also high in leaf petioles (68.94% to 74.16%) of red colored cultivars. However, betacyanins were completely absent from the extracts of all analyzed parts of yellow beet. Glutamine-bx represented a very high relative peak area (59.54% to 64.18%) in flesh of red-colored cultivars analyzed in the study. Our results indicate that red beet cultivars can be utilized as a potential source of red and yellow natural colorants. However, differences in pigment composition among different beetroot parts must be considered and in order to maximize the pigment yields petioles can also be used as a source rich in specific betalain compounds. PMID:26243178

  12. Response of winter rape (Brassica napus L. ssp. oleifera Metzg., Sinsk to foliar fertilization and different seeding rates

    Directory of Open Access Journals (Sweden)

    Cezary A. Kwiatkowski

    2012-12-01

    Full Text Available A field experiment in growing winter rape was carried out during the period 2009-2011 in a family farm (owned by Mr. M. Bednarczyk located in Jaroszewice (Lublin region, on podzolic soil. Plant biometric features as well as yield and seed qualitative parameters (oil, protein and glucosinolate content were evaluated depending on the following rates of soil NPK fertilizers and on foliar fertilization (autumn spraying with the fertilizer solution: 100% and 75% of NPK as well as urea + nickel chelate + MgSO4H2O; 100% and 75% of NPK as well as urea + Plonvit R + MgSO4H2O. Plots without foliar fertilization (only 100% of NPK were the control treatment. The other experimental factor was the seeding rate (2.5 kg×ha-1 – 30 cm row spacing; 4 kg×ha-1 – 18 cm row spacing. Foliar spraying was done once in the autumn in the second decade of October. Tillage as well as mechanical and chemical control of agricultural pests in the plantation were typical for this plant species and consistent with the recommendations for winter rape protection. A hypothesis was made that the application of foliar fertilizers would have a beneficial effect on winter rape productivity, at the same time maintaining the high quality of raw material. It was also assumed that a reduction in the seeding rate of winter oilseed rape would result in reduced plant lodging and an increased number of siliques per plant; as a consequence, seed and oil productivity would be at a level not lower than that obtained at the higher seeding rate. The present study has proved that foliar fertilization of winter oilseed rape in the autumn period contributes to improved plant winter hardiness and increased productivity. The application of foliar fertilizers also enables the rates of basic mineral NPK fertilizers to be reduced by 25% without detriment to seed yield. Foliar fertilizers have been found to have a weaker effect on changing the chemical composition of rapeseed. The study has shown that, from the productive point of view, it is justified to use the lower seeding rate (2.5 kg×ha-1, since winter rape yield (seed and oil yield did not significantly differ from that found in the case of the higher seeding rate (4.0 kg×ha-1.

  13. Factors affecting growth and nodulation of Hippophae rhamnoides L. ssp. Rhamnoides in soils from two successional stages of dune formation

    International Nuclear Information System (INIS)

    To explain the decline of Hippophae scrub in the vegetation succession in the dunes of The Netherlands the growth and nodulation of Hippophae plants grown in pots, using soil from an early stage (site AH) and a post-optimum stage (site HP), were investigated. In HP-soil nodulation, yield, and the nitrogen and phosphorus content of test plants were always lower and the number of necrotic nodules and the dry matter content were always higher than in AH-soil, even after inoculation with crushed nodules and the addition of a nutrient solution. Plants in HP-soil also had darker roots, less root hairs, a higher number of short lateral roots and a higher percentage of dead roots than those in AH-soil. These characteristics of adverse growth conditions disappeared upon ignition or gamma irradiation of HP-soil. Possible explanations of these results are discussed. (orig./AJ)

  14. Lipidation of the FPI protein IglE contributes to Francisella tularensis ssp. novicida intramacrophage replication and virulence

    OpenAIRE

    Nguyen, Jesse Q.; Gilley, Ryan P.; Zogaj, Xhavit; Rodriguez, Stephen A.; Klose, Karl E.

    2014-01-01

    Francisella tularensis is a Gram-negative bacterium responsible for the human disease tularemia. The Francisella pathogenicity island (FPI) encodes a secretion system related to type VI secretion systems (T6SS) which allows F. tularensis to escape the phagosome and replicate within the cytosol of infected macrophages and ultimately cause disease. A lipoprotein is typically found encoded within T6SS gene clusters and is believed to anchor portions of the secretion apparatus to the outer membra...

  15. Genetic mapping of stem rust resistance gene Sr13 in tetraploid wheat (Triticum turgidum ssp. durum L.)

    OpenAIRE

    Simons, K; Abate, Z.; Chao, S; Zhang, W.; Rouse, M; Jin, Y.; Elias, E; Dubcovsky, J

    2011-01-01

    Wheat stem rust caused by Puccinia graminis f. sp. tritici, can cause significant yield losses. To combat the disease, breeders have deployed resistance genes both individually and in combinations to increase resistance durability. A new race, TTKSK (Ug99), identified in Uganda in 1999 is virulent on most of the resistance genes currently deployed, and is rapidly spreading to other regions of the world. It is therefore important to identify, map, and deploy resistance genes that are still eff...

  16. Seed reserve composition and mobilization during germination and early seedling establishment of Cereus jamacaru D.C. ssp. jamacaru (Cactaceae

    Directory of Open Access Journals (Sweden)

    Nara L.M. Alencar

    2012-09-01

    Full Text Available Cereus jamacaru, a Cactaceae found throughout northeast Brazil, is widely used as cattle food and as an ornamental and medicinal plant. However, there has been little information about the physiological and biochemical aspects involved in its germination. The aim of this study was to investigate its reserve mobilization during germination and early seedling growth. For this, C. jamacaru seeds were germinated in a growth chamber and collected at 0, 2, 4, 5, 6, 8 and 12 days after imbibition for morphological and biochemical analyses. Dry seeds had wrinkled seed coats and large, curved embryos. Lipids were the most abundant reserve, comprising approximately 55% and 65% of the dry mass for cotyledons and the hypocotylradicle axis, respectively. Soluble sugars and starch were the minor reserves, corresponding to approximately 2.2% of the cotyledons' dry mass, although their levels showed significant changes during germination. Soluble proteins corresponded to 40% of the cotyledons' dry mass, which was reduced by 81% at the final period of germination compared to dry seeds. C. jamacaru seed can be classified as an oil seed due to its high lipid content. Moreover, lipids were the main reserve mobilized during germination because their levels were strongly reduced after seed germination, while proteins were the second most utilized reserve in this process.Cereus jamacaru, uma cactácea encontrada comumente no nordeste brasileiro, é amplamente usada como planta forrageira e como ornamental e medicinal. No entanto, existem poucas informações sobre os aspectos fisiológicos e bioquímicos relacionados à sua germinação. O objetivo desse estudo foi avaliar a mobilização de reservas durante a germinação e o crescimento inicial de plântulas de C. jamacaru. Para isso, as sementes foram germinadas em câmaras de germinação e coletadas aos 0, 2, 4, 5, 6, 8 e 12 dias após a germinação para as análises fisiológicas e bioquímicas. As sementes quiescentes apresentaram tegumento espesso e rugoso e embriões curvados. Os lipídios foram as reservas mais abundantes, correspondendo aproximadamente a 55% e 65% da massa seca dos cotilédones e eixo hipocótilo-radícula, respectivamente. Os açúcares solúveis e o amido foram as reservas menos abundantes, correspondendo aproximadamente a 2,2% da massa seca dos cotilédones, embora suas reservas tenham apresentado mudanças significativas durante a germinação. As proteínas solúveis corresponderam a 40% da massa seca dos cotilédones, que foi reduzida a 81% no período final de germinação comparado a sementes quiescentes. As sementes de C. jamacaru podem ser consideradas oleaginosas devido ao seu alto conteúdo de lipídios. Além disso, os lipídios foram as principais reservas mobilizadas durante a germinação porque seus níveis foram fortemente reduzidos durante esse período, enquanto que as proteínas foram a segunda reserva mais utilizada nesse processo.

  17. Preparation of low galactose yogurt using cultures of Gal(+) Streptococcus thermophilus in combination with Lactobacillus delbrueckii ssp. bulgaricus.

    Science.gov (United States)

    Anbukkarasi, Kaliyaperumal; UmaMaheswari, Thiyagamoorthy; Hemalatha, Thiagarajan; Nanda, Dhiraj Kumar; Singh, Prashant; Singh, Rameshwar

    2014-09-01

    Streptococcus thermophilus is an important lactic starter used in the production of yogurt. Most strains of S. thermophilus are galactose negative (Gal(-)) and are able to metabolize only glucose portion of lactose and expel galactose into the medium. This metabolic defect leads to the accumulation of free galactose in yogurt, resulting in galactosemia among consumers. Hence there is an absolute need to develop low galactose yogurt. Therefore, in this study, three galactose positive (Gal(+)) S. thermophilus strains from National Collection of Dairy Cultures (NCDC) viz. NCDC 659 (AJM), NCDC 660 (JM1), NCDC 661 (KM3) and a reference galactose negative (Gal(-)) S. thermophilus NCDC 218 were used for preparation of low galactose yogurt. In milk fermented using S. thermophilus isolates alone, NCDC 659 released less galactose (0.27 %) followed by NCDC 661 (0.3 %) and NCDC 660 (0.45 %) after 10 h at 42 °C. Milk was fermented in combination with Gal(-) L. delbrueckii subsp. bulgaricus NCDC 04, in which NCDC 659 released least galactose upto 0.49 % followed by NCDC 661 (0.51 %) and NCDC 660 (0.60 %) than reference Gal(-) NCDC 218(0.79 %). Low galactose yogurt was prepared following standard procedure using Gal(+) S. thermophilus isolates and Gal(-) L. delbrueckii subsp. bulgaricus NCDC 04 in 1:1 ratio. Among which low galactose yogurt by NCDC 659 combination contained less galactose 0.37 % followed by NCDC 661 (0.51 %), NCDC 660 (0.65 %) and reference Gal(-) NCDC 218 (0.98 %) after 4 h of fermentation. This study clearly reveals that Gal(+) S. thermophilus isolates can be paired with Gal(-) L. delbrueckii subsp. bulgaricus for developing low galactose yogurt. PMID:25190881

  18. Feeding Lactobacillus paracasei ssp. paracasei strain F19 to infants during weaning : effects on adaptive immunity and gut microbial function

    OpenAIRE

    West, Christina

    2008-01-01

    Introduction: Gut microbial composition has been associated with immune-mediated diseases. Breastfeeding yields a microbiota rich in bifidobacteria and promotes colonization by lactobacilli. Bifidobacteria and lactobacilli are considered health-promoting and are used as probiotics, i.e. live microbial food supplements which when ingested in adequate amounts confer a beneficial effect on the host. During weaning the developing gut immune system is exposed to an increasing variety of antigens f...

  19. HLA-DRB, DQA and DQB allele frequencies in Iranian patients with chronic hepatitis B by PCR-SSP

    OpenAIRE

    Baniaghil S; Sarafnejad A; Amirzargar A; Khosravi F; Ansaripour B; Moradi B; Dorkhosh S; Nikbin B

    2007-01-01

    Background: The outcome of acute hepatitis B infection may be influenced by host genetic factors like human leukocyte antigen (HLA). To investigate the association between the HLA-DRB, DQA1 and DQB1 alleles and chronic hepatitis B infection, 50 patients with chronic hepatitis B (based on 6 months positive of HBsAg and HBc antibody and HBeAg and antibody by serological test), were selected from Turkman population in north east of Iran .Allele frequency in patients were compared with a 65 aged ...

  20. Influence of weather conditions on the growth and yield of selected sweet corn (Zea mays ssp. saccharata varieties

    Directory of Open Access Journals (Sweden)

    Hubert Waligóra

    2013-03-01

    Full Text Available The aim of this study was to determine the relationship between the duration of different phases of development and yield and the precipitation and temperature for the selected varieties of sweet corn. The experiment was conducted in the period 2009 to 2011 at the Experimental-Didactic Station Gorzyń with a branch in Swadzim. During the growth of plants precipitation and temperature data were collected. After reaching milk maturity, yield was collected and cobs were identified. Then the length of different phases of development was calculated. The statistical analysis was done with Statistica 10 programm. On the basis of the studies the significant effect was found of precipitation and temperature on the growth and yield of tested sweet corn varieties. During sowing – fifth-sixth leaf stage, sowing – panicles, sowing – milk maturity more important role was played by precipitation. Yield and the length of period sowing – emergence depend as much on precipitation and temperature. Of the eight tested varieties ‘Basin’, ‘Sweet Nugget’ and ‘Overland’ yielded best, while ‘Naziha’ – worst.

  1. Comparative chloroplast genomics and phylogenetics of Fagopyrum esculentum ssp. ancestrale – A wild ancestor of cultivated buckwheat

    OpenAIRE

    Dhingra Amit; Samigullin Tahir H; Logacheva Maria D; Penin Aleksey A

    2008-01-01

    Abstract Background Chloroplast genome sequences are extremely informative about species-interrelationships owing to its non-meiotic and often uniparental inheritance over generations. The subject of our study, Fagopyrum esculentum, is a member of the family Polygonaceae belonging to the order Caryophyllales. An uncertainty remains regarding the affinity of Caryophyllales and the asterids that could be due to undersampling of the taxa. With that background, having access to the complete chlor...

  2. Step-by-step evolution of neo-sex chromosomes in geographical populations of wild silkmoths, Samia cynthia ssp

    Czech Academy of Sciences Publication Activity Database

    Yoshido, A.; Sahara, K.; Marec, František; Matsuda, Y.

    2011-01-01

    Roč. 106, č. 4 (2011), s. 614-624. ISSN 0018-067X R&D Projects: GA AV ČR IAA600960925 Grant ostatní: Japan Society for the Promotion of Science(JP) 19-1114; Japan Society for the Promotion of Science(JP) 21-7147 Institutional research plan: CEZ:AV0Z50070508 Keywords : Lepidoptera * sex chromosome s * fluorescences Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 4.597, year: 2011

  3. Probiotic Leuconostoc mesenteroides ssp.cremoris and Streptococcus thermophilus induce IL-12 and IFN-γ production

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    AIM: To investigate the capacity of potentially probiotic strains from six bacterial genera to induce cytokine production alone or in combinations in order to identify potential enhancing or synergistic effects in order to select probiotic bacteria for in vivo purposes. METHODS: Cytokine production in human peripheral blood mononuclear cells (PBMC) in response to stimulation with eleven different potentially probiotic bacterial strains from Streptococcus, Lactobacillus, Bifidobacterium, Lactococcus, Leuconostoc and Propionibacterium genera was analysed. Production and mRNA expression of TNF-α, IL-12,IFN-γ and IL-10 were determined by ELISA and Northern blotting, respectively. RESULTS: All tested bacteria induced TNF-α production. The best inducers of Thl type cytokines IL-12 and IFN-γ were Streptococcus and Leuconostoc strains. All Bifidobacteriurn and Propionibacteriurn strains induced higher IL-10 production than other studied bacteria. Stimulation of PBNC with any bacterial combinations did not result in enhanced cytokine production suggesting that different bacteria whether gram-positive or gram negative compete with each other during host cell interactions. CONCLUSION: The probiotic S. thermophilus and Leuconostoc strains are more potent inducers of Thl type cytokines IL-12 and IFN-γ than the probiotic Lactobacillus strains. Bacterial combinations did not result in enhanced cytokine production.

  4. Preparation of low galactose yogurt using cultures of Gal+Streptococcus thermophilus in combination with Lactobacillus delbrueckii ssp. bulgaricus

    OpenAIRE

    Anbukkarasi, Kaliyaperumal; UmaMaheswari, Thiyagamoorthy; Hemalatha, Thiagarajan; Nanda, Dhiraj Kumar; Singh, Prashant; Singh, Rameshwar

    2014-01-01

    Streptococcus thermophilus is an important lactic starter used in the production of yogurt. Most strains of S. thermophilus are galactose negative (Gal−) and are able to metabolize only glucose portion of lactose and expel galactose into the medium. This metabolic defect leads to the accumulation of free galactose in yogurt, resulting in galactosemia among consumers. Hence there is an absolute need to develop low galactose yogurt. Therefore, in this study, three galactose positive (Gal+) S. t...

  5. The fate of W chromosomes in hybrids between wild silkmoths, Samia cynthia ssp.: no role in sex determination and reproduction

    Czech Academy of Sciences Publication Activity Database

    Yoshido, Atsuo; Marec, František; Sahara, K.

    2016-01-01

    Roč. 116, č. 5 (2016), s. 424-433. ISSN 0018-067X R&D Projects: GA ČR(CZ) GA14-22765S Grant ostatní: The European Union Seventh Framework Programme (FP7/2007-2013)(CZ) 316304 Institutional support: RVO:60077344 Keywords : hybrids * sex chromosomes * sex determination Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 3.805, year: 2014

  6. Phage types of Salmonella enterica ssp. enterica serovar Typhimurium isolated from production animals and humans in Denmark

    DEFF Research Database (Denmark)

    Baggesen, Dorte Lau; Wegener, Henrik Caspar

    1994-01-01

    S. Typhimurium is one of the 2 most common salmonella serotypes causing human salmonellosis in Denmark. In order to illustrate the significance of different production animals as a source of infection, 1461 isolates were characterized by phage typing. The isolates originated from human patients and...... from cattle, pigs and poultry. By phage typing the isolates could be separated in 35 different phage types. Five types (10, 12, 66, 110 and 135) predominated and comprised 78.8% of the isolates. In humans, 57.3% of the isolates were phage type 12. This phage type was also predominant in pig herds and......, to a lesser degree, in cattle. Phage types 110, 120, 135 and 193 constituted 86.5% of the poultry isolates while these phage types only made up 12.9% of the human isolates. The investigation showed that pigs are probably a major source of S. Typhimurium infection in humans in Denmark today....

  7. Phage types of Salmonella enterica ssp. enterica serovar Typhimurium isolated from production animals and humans in Denmark

    DEFF Research Database (Denmark)

    Baggesen, Dorte Lau; Wegener, Henrik Caspar

    1994-01-01

    S. Typhimurium is one of the 2 most common salmonella serotypes causing human salmonellosis in Denmark. In order to illustrate the significance of different production animals as a source of infection, 1461 isolates were characterized by phage typing. The isolates originated from human patients a...

  8. Antidiabetic Activity of Acacia tortilis (Forsk. Hayne ssp. raddiana Polysaccharide on Streptozotocin-Nicotinamide Induced Diabetic Rats

    Directory of Open Access Journals (Sweden)

    Pradeep Kumar Bhateja

    2014-01-01

    Full Text Available The present study was designed to investigate the antidiabetic activity of aqueous extract of Acacia tortilis polysaccharide (AEATP from gum exudates and its role in comorbidities associated with diabetes in STZ-nicotinamide induced diabetic rats. Male albino Wistar rats were divided into control, diabetic control, glimepiride treated (10 mg/kg, and diabetic rats treated with 250, 500, and 1000 mg/kg dose of AEATP groups and fasting blood glucose, glycated hemoglobin, total cholesterol, triglyceride, LDL, VLDL, HDL, SGOT, and SGPT levels were measured. STZ significantly increased fasting blood glucose level, glycated hemoglobin, total cholesterol, triglyceride, LDL, VLDL, SGOT, and SGPT levels, whereas HDL level was reduced as compared to control group. After 7 days of administration, 500 and 1000 mg/kg dose of AEATP showed significant reduction (P<0.05 in fasting blood glucose level compared to diabetic control. AEATP has also reduced total cholesterol, triglyceride, LDL, VLDL, SGOT, and SGPT levels and improved HDL level as compared to diabetic control group. Our study is the first to report the normalization of fasting blood glucose level, lipid profile, and liver enzyme in AEATP treated diabetic rats. Thus, it can be concluded that AEATP may have potentials for the treatment of T2DM and its comorbidities.

  9. The yield and essential oil content of mint (Mentha ssp.) in Northern Ostrobothnia

    OpenAIRE

    Aflatuni, A. (Abbas)

    2005-01-01

    Abstract Peppermint (Mentha x piperita L.) oil is one of the most popular and widely used essential oils, mostly because of its main components menthol and menthone. Peppermint oil is used for flavouring pharmaceuticals and oral preparations. Corn mint is the richest source of natural menthol. Carvone-scented mint plants, such as spearmint (M. spicata), are rich in carvone and are widely used as spices, and they are cultivated in several countries. Studies were made into the yield and esse...

  10. Samenstelling van de vluchtige olie van Origanum vulgare L. ssp. vulgare gedurende de ontwikkeling van de plant

    NARCIS (Netherlands)

    Maarse, Henk

    1971-01-01

    INLEIDING EN DOEL VAN HET ONDERZOEK Vele onderzoekers hebben de laatste jaren de vorming van de verbindingen in vluchtige olien van planten bestudeerd door het bepalen van de verandering in de samenstelling van de vluchtige olie tijdens de groei van de plant. Lemli (68) wees als eerste op de noodzaa

  11. Mitochondrial COI and morphological specificity of the mealy aphids (Hyalopterus ssp. collected from different hosts in Europe (Hemiptera, Aphididae

    Directory of Open Access Journals (Sweden)

    Rimantas Rakauskas

    2013-07-01

    Full Text Available Forty three European population samples of mealy aphids from various winter and summer host plants were attributed to respective species of Hyalopterus by means of their partial sequences of mitochondrial COI gene. Used Hyalopterus samples emerged as monophyletic relative to outgroup and formed three major clades representing three host specific mealy aphid species in the Neighbor joining, Maximum parsimony, Maximum likelihood and Bayesian inference trees. H. pruni and H. persikonus emerged as a sister species, whilst H. amygdali was located basally. Samples representing different clades in the molecular trees were used for canonical discrimination analysis based on twenty two morphological characters. Length of the median dorsal head hair enabled a 97.3 % separation of H. amygdali from the remaining two species. No single character enabled satisfactory discrimination between apterous viviparous females of H. pruni and H. persikonus. A modified key for the morphological identification of Hyalopterus species is suggested and their taxonomic status discussed.

  12. Detection and differentiation of wild-type and a vaccine strain of Streptococcus equi ssp. equi using pyrosequencing.

    Science.gov (United States)

    Livengood, Julia L; Lanka, Saraswathi; Maddox, Carol; Tewari, Deepanker

    2016-07-25

    Streptococcus equi subspecies equi (S. equi), the causative agent of strangles, is an important equine pathogen. Strangles is a highly contagious disease and a commercial modified live vaccine (MLV) is used for protection, which although effective, may also result in clinical signs of the disease. A rapid means to differentiate between the MLV and wild-type infection is crucial for quarantine release and limiting the disease spread. This study describes the use of a pyrosequencing assay targeting a single nucleotide deletion upstream of the SzPSe gene to distinguish between the wild-type and vaccine strains. A set of 96 characterized clinical specimens and isolates were tested using the assay. The assay was successful in differentiating between wild-type S. equi and the vaccine strains and in discriminating S. equi from other Streptococci. The vaccine strain was identified in 61.7% (29/47) of the strangles cases in horses with a history of MLV vaccination. PMID:27317457

  13. Induction by chromium ions of chitinases and polyamines in barley (Hordeum vulgare L.) and rape (Brassica napus L. ssp. oleifera)

    DEFF Research Database (Denmark)

    Jacobsen, S.; Hauschild, M.Z.; Rasmussen, U.

    1992-01-01

    Barley and rape seedlings were grown in hydroponic culture with increasing concentrations of CrO3 (Cr(VI)) or CrCl3 (Cr(III)). The chitinase activity and the concentrations of putrescine, spennidine and spermine were determined in the third leaf of barley seed-lings and in the second leaf of rape...

  14. Innovative Verwertungsmöglichkeiten von Wildrosen (Rosa ssp.) als Rohstoff für die Lebensmittelindustrie, Pharmaindustrie und Kosmetik

    OpenAIRE

    Baku, Irina

    2010-01-01

    Die Arbeit stellt den Bekanntheitsgrad in der Bevölkerung, die Bedeutung und die Verwendungsmöglichkeiten von Rosen/ Hagebutten in den Branchen Medizin, Kosmetik und Lebensmittel dar. Diese werben mit: Hagebuttentees zur Immunstärkung, Rosencremes zur Hautregeneration, ätherische Rosenöle zum Stressabbau. Verwendung finden von Hagebuttennüsschen und -schalen, der Laubblätter und der Blütenblätter auch aus ökologischen Anbauprojekten. Beschrieben durch Unternehmen aus Food und Non-Food Bereich...

  15. Enzymatic fractionation of the antimicrobial peptides casocidin and isracidin by Streptococcus thermophilus and Lactobacillus delbrueckii ssp. bulgaricus

    Science.gov (United States)

    The cumulative effect of peptidase and protease activities associated with cells of Streptococcus thermophilus (ST) and Lactobacillus delbrueckii subsp. bulgaricus (LB) was evaluated on the milk-protein based antimicrobial peptides casocidin and isracidin. Reaction mixtures of casocidin or isracidin...

  16. Characterization and Development of EST-SSRs by Deep Transcriptome Sequencing in Chinese Cabbage (Brassica rapa L. ssp. pekinensis

    Directory of Open Access Journals (Sweden)

    Qian Ding

    2015-01-01

    Full Text Available Simple sequence repeats (SSRs are among the most important markers for population analysis and have been widely used in plant genetic mapping and molecular breeding. Expressed sequence tag-SSR (EST-SSR markers, located in the coding regions, are potentially more efficient for QTL mapping, gene targeting, and marker-assisted breeding. In this study, we investigated 51,694 nonredundant unigenes, assembled from clean reads from deep transcriptome sequencing with a Solexa/Illumina platform, for identification and development of EST-SSRs in Chinese cabbage. In total, 10,420 EST-SSRs with over 12 bp were identified and characterized, among which 2744 EST-SSRs are new and 2317 are known ones showing polymorphism with previously reported SSRs. A total of 7877 PCR primer pairs for 1561 EST-SSR loci were designed, and primer pairs for twenty-four EST-SSRs were selected for primer evaluation. In nineteen EST-SSR loci (79.2%, amplicons were successfully generated with high quality. Seventeen (89.5% showed polymorphism in twenty-four cultivars of Chinese cabbage. The polymorphic alleles of each polymorphic locus were sequenced, and the results showed that most polymorphisms were due to variations of SSR repeat motifs. The EST-SSRs identified and characterized in this study have important implications for developing new tools for genetics and molecular breeding in Chinese cabbage.

  17. Stereoselective uptake and distribution of the chiral neonicotinoid insecticide, Paichongding, in Chinese pak choi (Brassica campestris ssp. chinenesis)

    Energy Technology Data Exchange (ETDEWEB)

    Wang, Haiyan; Yang, Zhen; Liu, Ruyang; Fu, Qiuguo; Zhang, Sufen; Cai, Zhiqiang; Li, Juying; Zhao, Xiaojun [Institute of Nuclear Agricultural Sciences, Key Laboratory of Nuclear Agricultural Sciences of Ministry of Agriculture and Zhejiang Province, Zhejiang University, Hangzhou 310029 (China); Ye, Qingfu, E-mail: qfye@zju.edu.cn [Institute of Nuclear Agricultural Sciences, Key Laboratory of Nuclear Agricultural Sciences of Ministry of Agriculture and Zhejiang Province, Zhejiang University, Hangzhou 310029 (China); Wang, Wei [Institute of Nuclear Agricultural Sciences, Key Laboratory of Nuclear Agricultural Sciences of Ministry of Agriculture and Zhejiang Province, Zhejiang University, Hangzhou 310029 (China); Li, Zhong, E-mail: lizhong@ecust.edu.cn [School of Pharmacy, East China University of Science and Technology, 130 Meilong Road, Shanghai 200237 (China)

    2013-11-15

    Highlights: • Absorption of foliar applied Paichongding by pak choi was not stereoselective. • Foliar uptake and downward transport of Paichongding were both found in pak choi. • Enantioselective and epimer-selective root uptake were observed for Paichongding. • Foliage/root uptake showed diastereoselective transport of Paichongding epimers. • The SR and RS are more easily taken up by roots and accumulated in edible parts. -- Abstract: Neonicotinoid chiral insecticidal Paichongding is a promising substitute for the widely used imidacloprid. Four stereoisomers of Paichongding, 5R,7R, 5S,7S, 5S,7R and 5R,7S, were employed in both foliage and roots of Chinese pak choi to investigate their stereoselective uptake and distribution in pak choi. Results showed that after foliar application, no stereoselective absorption into pak-choi plants was observed among the enantiomers. Total absorptions were 35.40% of the applied amount for 5R,7R, 36.66% for 5S,7S, 36.80% for 5S,7R and 38.20% for 5R,7S at 96 HAT. The translocation of the four absorbed stereoisomers within pak choi occurred both acropetally and basipetally and the transport of {sup 14}C from enantiomers 5R,7R and 5S,7S were significantly higher than for 5R,7S and 5S,7R. Significant stereoselective translocation inside plants was observed between Paichongding epimers. Total root uptake reached 16.49–19.85% for 5R,7R and 5S,7S, and 24.57–28.82% for 5S,7R and 5R,7S at 144 HAT. Both enantioselective and diastereoselective root uptake into pak-choi occurred between the four stereoisomers. The 5R,7S and 5S,7R enantiomers were more readily uptaken by the roots than 5R,7R and 5S,7S and accumulated in the edible leaves. These results will help to develop an understanding of Paichongding using only the target-active enantiomer of pesticides.

  18. Effects of irradiation treatment on shoot regeneration and transformation frequency of chinese cabbage (Brassica campestris SSP. Chinensis L)

    International Nuclear Information System (INIS)

    Cotyledons with petiole were cultured on MS basic medium containing 5 mg/L BA, 0.5 mg/L NAA, 5 mg/L AgNO3, and produced adventitious buds with higher frequency. Induction frequency of adventitious buds could be increased by irradiation treatment of γ-rays with the lower dose of 1-2.5 Gy to seedlings and explants in culture, but decreased dramatically when the dose was higher than 10 Gy. Irradiation treatment in co-culture with lower dose of 1-7.5 Gy also promote transient expression frequency of gus gene, while irradiation treatment in pre-culture did not show obvious effect on transient expression of gus gene

  19. Length of guanosine homopolymeric repeats modulates promoter activity of subfamily II tpr genes of Treponema pallidum ssp. pallidum

    OpenAIRE

    Giacani, Lorenzo; Lukehart, Sheila; Centurion-Lara, Arturo

    2007-01-01

    In Treponema pallidum, homopolymeric guanosine repeats of varying length are present upstream of both Subfamily I (tprC, D, F and I) and II (tprE, G and J) tpr genes, a group of potential virulence factors, immediately upstream of the +1 nucleotide. To investigate the influence of these poly-G sequences on promoter activity, tprE, G, J, F and I promoter regions containing homopolymeric tracts with different numbers of Gs, the ribosomal binding site and start codon were cloned in frame with th...

  20. Length of guanosine homopolymeric repeats modulates promoter activity of subfamily II tpr genes of Treponema pallidum ssp. pallidum.

    Science.gov (United States)

    Giacani, Lorenzo; Lukehart, Sheila; Centurion-Lara, Arturo

    2007-11-01

    In Treponema pallidum, homopolymeric guanosine repeats of varying length are present upstream of both Subfamily I (tprC, D, F and I) and II (tprE, G and J) tpr genes, a group of potential virulence factors, immediately upstream of the +1 nucleotide. To investigate the influence of these poly-G sequences on promoter activity, tprE, G, J, F and I promoter regions containing homopolymeric tracts with different numbers of Gs, the ribosomal binding site and start codon were cloned in frame with the green fluorescent protein reporter gene (GFP), and promoter activity was measured both as fluorescence emission from Escherichia coli cultures transformed with the different plasmid constructs and using quantitative RT-PCR. For tprJ, G and E-derived clones, fluorescence was significantly higher with constructs containing eight Gs or fewer, while plasmids containing the same promoters with none or more Gs gave modest or no signal above the background. In contrast, tprF/I-derived clones induced similar levels of fluorescence regardless of the number of Gs within the promoter. GFP mRNA quantification showed that all of the promoters induced measurable transcription of the GFP gene; however, only for Subfamily II promoters was message synthesis inversely correlated to the number of Gs in the construct. PMID:17683506

  1. Utilization of greenable albino mutation lines of thermosensitive genie male sterile rice (Oryza sativa L. ssp indica)

    International Nuclear Information System (INIS)

    Two greenable albino mutation lines W24 and W27 induced by 60Co gamma rays treatment on seeds of a thermosensitive genie male sterile (TGMS) rice c.v 2177S were investigated on their usefulness in two-line hybrid rice. The leaf color of W24 and W27 was similar and could be expressed in different temperature conditions. The first three leaves of W24 and W27 were ablinotic at extending, but changed into green after the fourth leaf extended. The greenable leaf area were about 40% for the first leaf and 90% for the third leaf. No significant differences were detected in morphoagronomic characters and styler extrusion rate between the mutation line and 2177S, which suggested that the mutation leaf color may be a useful marker in eliminating contamination of selfed seeds in two-line hybrid rice

  2. Use of visible and near-infrared spectroscopy for predicting antioxidant compounds in summer squash (Cucurbita pepo ssp pepo).

    Science.gov (United States)

    Blanco-Díaz, María Teresa; Del Río-Celestino, Mercedes; Martínez-Valdivieso, Damián; Font, Rafael

    2014-12-01

    The food industry and plant breeding programmes require fast, clean and low-cost screening techniques for nutritional compounds determination in food matrices. This is the first report on the study of the potential of near-infrared spectroscopy (NIRS) for the prediction of antioxidant compounds in summer squash tissues collected since 2009-2012. Modified partial least-squares (MPLS) regression was used to correlate spectral information and the different antioxidant compounds in the samples. The coefficients of determination in the external validation (r(2)ev) obtained were for ascorbic acid (0.77 and 0.86), chlorophyll a (0.79 and 0.66), chlorophyll b (0.86 and 0.79) and total phenolic compounds (0.65 and 0.68) in exocarp and mesocarp tissues, respectively, supporting that NIRS is able to predict in a rapid way these components for screening purposes. Major wavelengths influencing the calibration equations showed that chromophores as well as fibre components of the fruits highly participated in developing the NIR equations. PMID:24996338

  3. SLAC Scanner Processor: a FASTBUS module for data collection and processing

    International Nuclear Information System (INIS)

    A new, general purpose, programmable FASTBUS module, the SLAC Scanner Processor (SSP), is introduced. Both hardware and software elements of SSP operation are discussed. The role of the SSP within the upgraded Mark II Detector at SLAC is described

  4. Molecular evolution, characterization, and expression analysis of SnRK2 gene family in Pak-choi (Brassica rapa ssp. chinensis).

    Science.gov (United States)

    Huang, Zhinan; Tang, Jun; Duan, Weike; Wang, Zhen; Song, Xiaoming; Hou, Xilin

    2015-01-01

    The sucrose non-fermenting 1-related protein kinase 2 (SnRK2) family members are plant-specific serine/threonine kinases that are involved in the plant response to abiotic stress and abscisic acid (ABA)-dependent plant development. Further understanding of the evolutionary history and expression characteristics of these genes will help to elucidate the mechanisms of the stress tolerance in Pak-choi, an important green leafy vegetable in China. Thus, we investigated the evolutionary patterns, footprints and conservation of SnRK2 genes in selected plants and later cloned and analyzed SnRK2 genes in Pak-choi. We found that this gene family was preferentially retained in Brassicas after the Brassica-Arabidopsis thaliana split. Next, we cloned and sequenced 13 SnRK2 from both cDNA and DNA libraries of stress-induced Pak-choi, which were under conditions of ABA, salinity, cold, heat, and osmotic treatments. Most of the BcSnRK2s have eight exons and could be divided into three groups. The subcellular localization predictions suggested that the putative BcSnRK2 proteins were enriched in the nucleus. The results of an analysis of the expression patterns of the BcSnRK2 genes showed that BcSnRK2 group III genes were robustly induced by ABA treatments. Most of the BcSnRK2 genes were activated by low temperature, and the BcSnRK2.6 genes responded to both ABA and low temperature. In fact, most of the BcSnRK2 genes showed positive or negative regulation under ABA and low temperature treatments, suggesting that they may be global regulators that function at the intersection of multiple signaling pathways to play important roles in Pak-choi stress responses. PMID:26557127

  5. PCV2-DNA in formalin-fixed and paraffin embedded lymph nodes of wild boar (Sus scrofa ssp. scrofa: one sampling approach for two laboratory techniques

    Directory of Open Access Journals (Sweden)

    Morandi Federico

    2012-03-01

    Full Text Available Abstract Superficial inguinal lymph nodes from 72 wild boars examined in a previous immunohistochemical (IHC study on porcine circovirus type 2 (PCV2 were selected for a PCV2 polymerase chain reaction (PCR analysis. Four of these lymph nodes were PCV2-IHC strongly positive with PMWS histological lesions (outcome 1, 6 weak to mild PCV2-IHC positive without PMWS histological lesions (outcome 2 and 62 PCV2-IHC negative. Considering IHC the gold standard for diagnosis, the aims of the study were to evaluate the suitability of the PCV2-DNA extraction from formalin-fixed and paraffin-embedded (FFPE tissue and the sensitivity and specificity of PCR under two IHC interpretations criteria: (A the sample was considered positive if the result was outcome 1; (B the sample was considered positive if the result was outcome 1 or 2. Under (A criteria, sensitivity and specificity of PCR were 100% and 89.7%, respectively; the Cohen's Kappa coefficient was 0.49. Under (B criteria, sensitivity and specificity of PCR were 80.0% and 95.2%, respectively; the Cohen's Kappa coefficient was 0.72. The high Cohen's Kappa coefficient under the (B interpretative criteria indicates good agreement between the two methods. In conclusion, 1 DNA extracted from FFPE specimens of wild boar is suitable for PCR and further represents a screening test for PCV2/PCVD (PCV2 Diseases investigations in wild boar as well; 2 routine histological sampling can also be useful for PCV2 virological studies in wild boar.

  6. Genome-Wide Identification and Analysis of the VQ Motif-Containing Protein Family in Chinese Cabbage (Brassica rapa L. ssp. Pekinensis).

    Science.gov (United States)

    Zhang, Gaoyuan; Wang, Fengde; Li, Jingjuan; Ding, Qian; Zhang, Yihui; Li, Huayin; Zhang, Jiannong; Gao, Jianwei

    2015-01-01

    Previous studies have showed that the VQ motif-containing proteins in Arabidopsis thaliana and Oryza sativa play an important role in plant growth, development, and stress responses. However, little is known about the functions of the VQ genes in Brassica rapa (Chinese cabbage). In this study, we performed genome-wide identification, characterization, and expression analysis of the VQ genes in Chinese cabbage, especially under adverse environment. We identified 57 VQ genes and classified them into seven subgroups (I-VII), which were dispersedly distributed on chromosomes 1 to 10. The expansion of these genes mainly contributed to segmental and tandem duplication. Fifty-four VQ genes contained no introns and 50 VQ proteins were less than 300 amino acids in length. Quantitative real-time PCR showed that the VQ genes were differentially expressed in various tissues and during different abiotic stresses and plant hormone treatments. This study provides a comprehensive overview of Chinese cabbage VQ genes and will benefit the molecular breeding for resistance to stresses and disease, as well as further studies on the biological functions of the VQ proteins. PMID:26633387

  7. Functional identification of genes responsible for the biosynthesis of 1-methoxy-indol-3-ylmethyl-glucosinolate in Brassica rapa ssp. chinensis

    OpenAIRE

    Wiesner, Melanie; Schreiner, Monika; Zrenner, Rita

    2014-01-01

    Background Brassica vegetables contain a class of secondary metabolites, the glucosinolates (GS), whose specific degradation products determine the characteristic flavor and smell. While some of the respective degradation products of particular GS are recognized as health promoting substances for humans, recent studies also show evidence that namely the 1-methoxy-indol-3-ylmethyl GS might be deleterious by forming characteristic DNA adducts. Therefore, a deeper knowledge of aspects involved i...

  8. Ecological and anthropogenic drivers of Calabrian pine (Pinus nigra J.F. Arn. ssp. laricio (Poiret Maire distribution in the Sila mountain range

    Directory of Open Access Journals (Sweden)

    Nicolaci A

    2015-08-01

    Full Text Available The most well-known and vast Calabrian pine forests are in the Sila mountain range, southern Italy. In this paper, present-day distribution of Calabrian pine in the Sila district was analyzed and compared with forest maps dating back to 1935 in order to assess the changes in land use. Main ecological and anthropogenic factors affecting Calabrian pine forest distribution were investigated by logistic regression models to identify the most important predictors of Ca­labrian pine persistence, expansion, and transition over the period 1935-2006. In 2006, the area covered by Calabrian pine forests and mixed Calabrian pine-beech forests was 36 100 ha and 20 221 ha, respectively. Overall, pine forest area increased by 38% between 1935 and 2006. Logistic regression revealed that Calabrian pine distribution in the Sila district was affected by both ecolo­gical (bioclimate, soil, and elevation and anthropogenic factors (management, fire. Based on our results, four different potential dynamics of Calabrian pine stands are discussed in the perspective of the sustainable management and conservation of this important mountain forest habitat.

  9. THE EFFECT OF SILICON FOLIAR FERTILIZATION IN SUGAR BEET – Beta vulgaris (L.) ssp. vulgaris conv. crassa (Alef.) prov. altissima (Döll)

    OpenAIRE

    Artyszak, Arkadiusz; Gozdowski, Dariusz; Kucińska, Katarzyna

    2015-01-01

     ABSTRACT Presented results are extended continuation study of earlier research (2010–2012) on silicon fertilization effect and comes from the research that was conducted in 2013–2014 in the southeastern region of Poland, in Sahryń (50°41' N and 23°46' E). Two variants of silicon foliar fertilization were tested in sugar beet, Danuśka KWS variety. Two kinds of silicon fertilizers (Herbagreen Basic and Optysil) in 3 stages (in the stage of 4-6 sugar leaf, than a week and two weeks later). One ...

  10. The effects of kale (Brassica oleracea ssp. acephala), basil (Ocimum basilicum) and thyme (Thymus vulgaris) as forage material in organic egg production on egg quality

    DEFF Research Database (Denmark)

    Hammershøj, Marianne; Steenfeldt, Sanna

    2012-01-01

    thyme treatment. By sensory evaluation, the kale treatment resulted in eggs with less sulphur aroma, higher yolk colour score, and more sweet and less watery albumen taste. Furthermore, the eggs of the kale treatment had significantly higher lutein and -carotene content. Also, violaxanthin, an orange...

  11. Production of ethanol from lepthochloa fusca L. (kallar grass) and panicum maximum using cellulases from trichoderma SSP and cultures of saccharomyces carlsbergensis

    International Nuclear Information System (INIS)

    Saline sodic soils have been used for production of biomass using salt tolerant grass, kallar grass followed by lesser tolerant plants, namely, sasbania aculeata or Panicum maximum or to provide biomass throughout the year for it utilization for microbial conversion. These substrates have been utilized to produce single cell protein and cellases or hemicellulases. The enzyme titer obtained after growth of cellulomonas biazotea on kallar grass could saccharify wheat straw ad bagasse for subsequent conversion to ethanol but kallar grass itself was saccharified to lesser extent, however, enzyme titres from different fungi could saccherify the biomass produced on saline lands to monomeric sugars. In these studies, the enzyme titre from Trichoderma spp. were used for saccharification purpose. (author)

  12. Crescimento e desenvolvimento do amaranto (amaranthus spp. sob estresse salino e cobertura morta Growth and development of amaranth (amaranthus ssp under saline stress and mulch

    Directory of Open Access Journals (Sweden)

    Djeson Mateus Alves da Costa

    2008-02-01

    Full Text Available Investigar cultivares tolerantes à salinidade da água de irrigação e do solo é uma necessidade nas áreas agrícolas abastecidas por água de qualidade insatisfatória. O objetivo do presente trabalho foi avaliar a influência da salinidade da água de irrigação e da cobertura morta do solo no desenvolvimento vegetativo do amaranto (Amaranthus spp. cultivado em casa de vegetação. O experimento foi realizado entre março e maio de 2006, utilizando-se colunas de PVC com 30 kg de um solo de textura franco-siltosa. Adotou-se o delineamento inteiramente casualizado, com quatro repetições e oito tratamentos, sendo testado o uso ou não de cobertura morta e quatro níveis de salinidade na água de irrigação (0,147; 1,5; 3,0; e 4,5 dS m-1, a 25 °C. A cobertura morta antecipou o início da floração e aumentou a área foliar, a altura de planta, o diâmetro de caule e a produção de biomassa. O aumento na concentração salina não ocasionou redução nos teores de Ca e Mg, no tecido foliar. O aumento na concentração de sais na água de irrigação retardou a floração do amaranto, porém a espécie apresentou tolerância até o limite de 4,5 dS m-1, pois a produção de biomassa seca não foi afetada por esse aumento de salinidade.In agricultural areas irrigated with water of unsatisfactory quality, plants that are tolerant to the salinity in water and soil are needed. The purpose of this work was to evaluate the influence of the salinity of irrigation water and soil mulch on the vegetative development of amaranth (Amaranthus spp in a greenhouse. The experiment was carried out from March to May 2006 in PVC columns with 30 kg of soil with silt loam texture. The non-use of mulch and four salinity levels of the irrigation water (0.147; 1.5; 3.0; 4.5 dS m-1, to 25 °C was evaluated in a completely randomized design with eight treatments and four replications. Mulch reduced the beginning of flowering and increased the leaf area, plant height, stalk diameter and biomass production. The increase of the saline concentration did not reduce the calcium and magnesium concentrations in the leaf tissue. The higher salt concentration of the irrigation water delayed amaranth flowering, but the species was tolerant up to 4.5 dS m-1, since dry biomass production was not affected by the higher water salinity.

  13. Genome-Wide Identification and Analysis of the VQ Motif-Containing Protein Family in Chinese Cabbage (Brassica rapa L. ssp. Pekinensis

    Directory of Open Access Journals (Sweden)

    Gaoyuan Zhang

    2015-12-01

    Full Text Available Previous studies have showed that the VQ motif–containing proteins in Arabidopsis thaliana and Oryza sativa play an important role in plant growth, development, and stress responses. However, little is known about the functions of the VQ genes in Brassica rapa (Chinese cabbage. In this study, we performed genome-wide identification, characterization, and expression analysis of the VQ genes in Chinese cabbage, especially under adverse environment. We identified 57 VQ genes and classified them into seven subgroups (I–VII, which were dispersedly distributed on chromosomes 1 to 10. The expansion of these genes mainly contributed to segmental and tandem duplication. Fifty-four VQ genes contained no introns and 50 VQ proteins were less than 300 amino acids in length. Quantitative real-time PCR showed that the VQ genes were differentially expressed in various tissues and during different abiotic stresses and plant hormone treatments. This study provides a comprehensive overview of Chinese cabbage VQ genes and will benefit the molecular breeding for resistance to stresses and disease, as well as further studies on the biological functions of the VQ proteins.

  14. Establishing fuelwood plantation and fire wood tree crop performance on the highlands of Ethiopia: The case of Eucalyptus globulus Labill.ssp globulus

    Energy Technology Data Exchange (ETDEWEB)

    Mehari, A.

    1997-11-01

    This study reviews reasons for the establishment of fuelwood plantation and use of fuelwood in Ethiopia. The present and future status of fire wood and the environmental degradation and related consequences are also reviewed. 138 refs, 22 figs, 6 tabs

  15. Genome-wide identification, phylogeny, evolution and expression patterns of AP2/ERF genes and cytokinin response factors in Brassica rapa ssp. pekinensis.

    Directory of Open Access Journals (Sweden)

    Zhenning Liu

    Full Text Available The AP2/ERF transcription factor family is one of the largest families involved in growth and development, hormone responses, and biotic or abiotic stress responses in plants. In this study, 281 AP2/ERF transcription factor unigenes were identified in Chinese cabbage. These superfamily members were classified into three families (AP2, ERF, and RAV. The ERF family was subdivided into the DREB subfamily and the ERF subfamily with 13 groups (I- XI based on sequence similarity. Duplication, evolution and divergence of the AP2/ERF genes in B. rapa and Arabidopsis thaliana were investigated and estimated. Cytokinin response factors (CRFs, as a subclade of the AP2/ERF family, are important transcription factors that define a branch point in the cytokinin two-component signal (TCS transduction pathway. Up to 21 CRFs with a conserved CRF domain were retrieved and designated as BrCRFs. The amino acid sequences, conserved regions and motifs, phylogenetic relationships, and promoter regions of the 21 BrCRFs were analyzed in detail. The BrCRFs broadly expressed in various tissues and organs. The transcripts of BrCRFs were regulated by factors such as drought, high salinity, and exogenous 6-BA, NAA, and ABA, suggesting their involvement in abiotic stress conditions and regulatory mechanisms of plant hormone homeostasis. These results provide new insight into the divergence, variation, and evolution of AP2/ERF genes at the genome-level in Chinese cabbage.

  16. Fine mapping and identification of candidate Bo-or gene controlling orange head of Chinese cabbage (Brassica rapa L. ssp. Pekinensis)

    Science.gov (United States)

    Orange head Chinese cabbage accumulates significant amounts of carotenoids with enhanced nutritional quality. To develop molecular markers for breeding of Chinese cabbage lines with high carotenoid content and to isolate the candidate gene underlying carotenoid synthesis, we performed fine mapping ...

  17. CARACTERIZACIÓN MORFOAGRONÓMICA DEL GERMOPLASMA CUBANO DE PAPA (Solanum ssp. EVALUACIÓN DE LAS ESPECIES SILVESTRES. PARTE I

    Directory of Open Access Journals (Sweden)

    J. G. Castillo

    2007-01-01

    Full Text Available En el Instituto Nacional de Ciencias Agrícolas, durante las campañas 2002-2003, 2003-2004 y 2004-2005, se estudiaron 63 especies silvestres del germoplasma cubano de papa. Se realizó una caracterización morfoagronómica de las especies del banco, que incluyó los siguientes caracteres cualitativos: forma del tubérculo, color del tubérculo y profundidad de los ojos así como cuantitativos: rendimiento por planta (t.ha-1, masa promedio del tubérculo, número de tubérculos por planta y altura de la planta. Además, se evaluó el comportamiento ante el hongo A. solani y el virus del enrollamiento de la hoja (PLRV. Los caracteres cualitativos se expresan en porcentajes de presencia dentro de la colección. Para los cuantitativos se determinaron los estadísticos descriptivos, media, valores máximos y mínimos, desviación estándar y coeficiente de variación. Se realizó un análisis de componentes principales, para conocer la distribución de cada una de las especies dentro de la colección y su posible uso en el programa de mejoramiento cubano. Se encontró una alta variabilidad dentro de esta colección de especies silvestres para las condiciones cubanas, así como las fuentes de resistencia para el hongo A. solani y el PLRV. Se demostró, mediante esta caracterización, que existe un amplio pool de genes en esta colección, para ser utilizada más ampliamente en el programa de mejoramiento cubano.

  18. Fully automatic differential diagnosis system for dementia with Lewy bodies and Alzheimer's disease using FDG-PET and 3D-SSP

    Energy Technology Data Exchange (ETDEWEB)

    Kono, Atsushi K.; Ishii, Kazunari; Sofue, Keitaro; Miyamoto, Naokazu [Hyogo Brain and Heart Center, Department of Radiology and Nuclear Medicine, Himeji, Hyogo (Japan); Sakamoto, Setsu [Himeji Central Hospital, PET Center, Himeji, Hyogo (Japan); Mori, Etsuro [Tohoku University Graduate School of Medicine, Behavioral Neurology and Cognitive Neuroscience, Sendai, Miyagi (Japan)

    2007-09-15

    To evaluate a fully automatic computer-assisted diagnostic system for mild dementia with Lewy bodies (DLB), permitting distinction from mild Alzheimer's disease (AD). Using{sup 18}F-fluorodeoxyglucose and positron emission tomography (FDG-PET), glucose metabolic images were obtained from mild DLB and mild AD patients. Two groups consisting of 16 mild DLB patients and 21 mild AD patients were recruited for diagnostic evaluation between mild DLB and mild AD. The mean age {+-} SD of the mild DLB group and the mild AD group was 74.3 {+-} 4.9 and 71.7 {+-} 2.1 years, respectively, and the mean scores of the MMSE for the mild DLB and the mild AD group were 21.7 {+-} 1.9 and 23.1 {+-} 2.1, respectively. A receiver operating characteristic (ROC) analysis was performed to compare the diagnostic performance, in terms of discrimination between DLB and AD, of conventional axial FDG-PET images inspected visually by experts and beginners with that of our fully automatic diagnosis system using the statistical brain mapping method and Z scores obtained with the DLB template. The diagnostic performance of the automatic system was comparable to that of visual inspection by experts. The area under the ROC curve for the automatic diagnosis system was 0.77. The mean area under the ROC curve for visual inspection by experts and beginners was 0.76 and 0.65, respectively. The fully automatic differential diagnosis system for distinction between mild DLB and AD showed a similar diagnostic accuracy to visual inspection by experts. It would be a useful diagnostic tool to distinguish mild DLB from mild AD in clinical practice. (orig.)

  19. Untargeted Metabolomics for Sea Buckthorn (Hippophae rhamnoides ssp. carpatica Berries and Leaves: Fourier Transform Infrared Spectroscopy as a Rapid Approach for Evaluation and Discrimination

    Directory of Open Access Journals (Sweden)

    Raluca M. POP

    2014-12-01

    Full Text Available Untargeted metabolomics coupled with chemometric analysis was applied to evaluate and discriminate six Romanian sea buckthorn (Hippophae rhamnoides L. berries and leaves. Total carotenoids and total phenolics were determined quantitatively by UV-Vis spectrometry. The qualitative evaluation and discrimination was obtained using the FTIR fingerprints (by using Fourier Transform Infrared spectroscopy of raw carotenoid and phenolic extracts. The average concentration of total carotenoids was 54 and 3.9 mg carotenoids/ 100g DW in berries and leaves, respectively. The average concentration of total phenolics was 746 mg GAE/100g DW in berries, approximately 1.8 times lower than total phenolics found in leaves. By PCA (Principal Component Analysis of fingerprints (900-1800 cm-1, the responsible bands for samples discrimination were identified. In case of total carotenoids extract the biomarker bands were: 1745, 1743, 1500 cm-1 for berries and 1458 cm-1 and 1735 cm-1 for leaves, while for total phenolic extract the key bands were 1731, 1033, 1622 cm-1 for berries and 1047 cm-1, 1616, 1512 and 1454 cm-1 for leaves. FTIR spectroscopy proved to be a simple and sensitive analytical technique that can be successfully used in sample discrimination and classification.

  20. Effect of N fertilisation, year and prolamin alleles on gluten quality in durum wheat (Triticum turgidum L. ssp. turgidum) landraces from Spain

    Energy Technology Data Exchange (ETDEWEB)

    Aguiriano, E.; Ruiz, M.; Fite, R.; Carrillo, J. M.

    2009-07-01

    A subset of durum wheat Spanish land races, previously evaluated for yield at low and high nitrogen (N) levels, was analysed for quality, protein content (P) and sodium dodecyl sulphate sedimentation (SDSS) test. The evaluation was carried out at the two N rates and in two years. The influence of prolamine alleles at the Glu-1, Glu-3, Glu-B2 and Gli- 1 loci on quality parameters was also studied. The non significant Variety-by-Year or Variety-by-N interactions suggested that year and N affected all the varieties in a similar manner. Year and N effects were larger than variety effect for P, which increased with N. In contrast, variety genotype exhibited a stronger influence on SDSS test, which was not affected by year and fertilizer. Variety effects on P did not reflect the variety differences for SDSS test. A high positive influence of some prolamin alleles on quality parameters was detected, mainly for SDSS values. No correlation between yield and P was detected in the landraces adapted to low N. Based on the results of yield and quality evaluations, four landraces with high yield and high gluten strength were pre-selected for low N production. (Author)

  1. VARIABILITY OF LENGTH OF STEM OF DETERMINATE AND INDETERMINATE CULTIVARS OF COMMON VETCH (VICIA SATIVA L. SSP. SATIVA AND ITS IMPACT ON SELECTED CROPPING FEATURES

    Directory of Open Access Journals (Sweden)

    Jadwiga ANDRZEJEWSKA

    2006-12-01

    Full Text Available In the years 2001 and 2002, the study was conducted in six experiments in order to examine the conditioning of the length of stem variability and its impact on cropping features of determinate and indeterminate cultivars of common vetch. Rainfall in June and July as well as during the whole growing season was positively correlated with length of stem, but negatively correlated with seed yield, to a larger extent in the group of indeterminate cultivars than in the determinate one. Duration of blooming stage, length of stem, and seed yield showed the largest variability in both groups. Increase in length of stem of plants of indeterminate cultivars led to the delay in maturation, to less even maturation, and to the decrease in the thousand seed weight and seed yield. Increase in length of stem of plants of determinate cultivars delayed reaching the phase of technical maturation and decreased evenness of plant maturation. Determinate growth of common vetch did not lead to the reduction of lodging.

  2. Concise synthesis of N,N-dimethyltryptamine and 5-methoxy-N,N-dimethyltryptamine starting with bufotenine from Brazilian Anadenanthera ssp..

    Science.gov (United States)

    Moreira, Leandro A; Murta, Maria M; Gatto, Claudia C; Fagg, Christopher W; dos Santos, Maria L

    2015-04-01

    Bufotenine (1, 5-hydroxy-N,N-dimethyltryptamine) was isolated from seeds of Anadenanthera spp., a tree widespread in the Brazilian cerrado, using an efficient acid-base shakeout protocol. The conversion of bufotenine into N,N-dimethyltryptamine (4) and 5-methoxy-N,N-dimethyltryptamine (5) was accomplished through an innovative and short approach featuring the use of novel bufotenine-aminoborane complex (7). Furthermore, an easy methodology for conversion of bufotenine into 5-hydroxy-N,N,N-trimethyltryptamine (6) was well-established. This is the first study that highlights bufotenine as a resource for the production of N,N-dimethyltryptamines for either pharmacological and toxicological investigations or for synthetic purposes. PMID:25973481

  3. PCR-SSP法用于Dombrock血型Doa/Dob的基因分型%Study on dombrock blood group Doa and Dob genotyping by PCR-SSP technique

    Institute of Scientific and Technical Information of China (English)

    刘衍春; 许剑锋; 吴敏慧

    2009-01-01

    目的:了解Dombrock血型Doa和Dob基因在汉族人群中的分布.方法:采用PCR-SSP技术对Dombrock血型进行Doa和Dob基因分型.结果:248例Dombrock血型Doa的基因频率为0.0867,Dob的基因频率为0.9133.结论:248例Dombroek血型Doa及Dob的基因频率分别为0.0867和0.9133.PCR-SSP技术可以较好的对Dombrock血型进行DO基因分型.

  4. Minor iridoids from Scutellaria albida ssp albida. Inhibitory potencies on lipoxygenase, linoleic acid lipid peroxidation and antioxidant activity of iridoids from Scutellaria sp

    DEFF Research Database (Denmark)

    Gousiadou, Chrysoula; Gotfredsen, Charlotte Held; Matsa, Marina;

    2013-01-01

    A new iridoid glycoside, 6'-O-E-caffeoyl-mussaenosidic acid, in addition to one known aglycon, four known triterpenes and one known flavonoid, were isolated from the aerial parts of Scutellaria albida subsp. albida. Furthermore, 12 iridoids with similar structures isolated from Scutellariasp., were...... examined for their inhibitory potency on lipoxygenase and lipid peroxidation, as well as their antioxidant activity, in comparison to known antioxidants e. g. caffeic acid, nordihydroguaretic acid (NDGA) and trolox. AAPH, DPPH and soybean lipoxygenase (LOX) assays were used for the tests. This...

  5. Molecular evolution, characterization and expression analysis of SnRK2 gene family in Pak-choi (Brassica rapa ssp. chinensis

    Directory of Open Access Journals (Sweden)

    Zhinan eHuang

    2015-10-01

    Full Text Available Abstract: The sucrose non-fermenting 1-related protein kinase 2 (SnRK2 family members are plant-specific serine/threonine kinases that are involved in the plant response to abiotic stress and abscisic acid (ABA-dependent plant development. Further understanding of the evolutionary history and expression characteristics of these genes will help to elucidate the mechanisms of the stress tolerance in Pak-choi, an important green leafy vegetable in China. Thus, we investigated the evolutionary patterns, footprints and conservation of SnRK2 genes in selected plants and later cloned and analyzed SnRK2 genes in Pak-choi. We found that this gene family was preferentially retained in Brassicas after the Brassica-Arabidopsis thaliana split. Next, we cloned and sequenced 13 SnRK2 from both cDNA and DNA libraries of stress-induced Pak-choi, which were under conditions of ABA, salinity, cold, heat, and osmotic treatments. Most of the BcSnRK2s have eight exons and could be divided into three groups. The subcellular localization predictions suggested that the putative BcSnRK2 proteins were enriched in the nucleus. The results of an analysis of the expression patterns of the BcSnRK2 genes showed that BcSnRK2 group III genes were robustly induced by ABA treatments. Most of the BcSnRK2 genes were activated by low temperature, and the BcSnRK2.6 genes responded to both ABA and low temperature. In fact, most of the BcSnRK2 genes showed positive or negative regulation under ABA and low temperature treatments, suggesting that they may be global regulators that function at the intersection of multiple signaling pathways to play important roles in Pak-choi stress responses.

  6. Paper chromatography of anthocyanins in two species of Aconitum from the Tatry .Mts.: A. variegatum (L. Rchb., and A. napellus ssp. skerisorae (Gayer Seitz.

    Directory of Open Access Journals (Sweden)

    M. Krzakowa

    2015-05-01

    Full Text Available The results of studies on phenolic compounds occurence and variation in the two Aconitum species were reported in our previous paper (Szweykowski, Krzakowa, 1977a and b. A modified extraction method allowed us to get additional data on anthocyanin variation in flowers of the same species. In addition one albino plant of A. variegatum was also investigated in this respect.

  7. Ubiquity of .i.Polynucleobacter necessarius./i. ssp. .i.asymbioticus./i. in lentic freshwater habitats of a heterogenous 2000 km.sup.2./sup. area

    Czech Academy of Sciences Publication Activity Database

    Jezberová, Jitka; Jezbera, Jan; Brandt, U.; Lindström, E.S.; Langenheder, S.; Hahn, M.W.

    2010-01-01

    Roč. 12, č. 3 (2010), s. 658-669. ISSN 1462-2912. [SAME /11./. Piran, 30.08.09-05.09.09] R&D Projects: GA ČR(CZ) GA206/08/0015 Institutional research plan: CEZ:AV0Z60170517 Keywords : Polynucleobacter * ubiquity * ecotype Subject RIV: EE - Microbiology, Virology Impact factor: 5.537, year: 2010

  8. Iridoids from Scutellaria goulimyi Rech. f., Lamiaceae. Morphological and chemical relations with Scutellaria albida L. ssp albida

    DEFF Research Database (Denmark)

    Gousiadou, Chrysoula; Gotfredsen, Charlotte Held; Jensen, Søren Rosendal;

    2012-01-01

    Scutellaria goulimyi is a plant of the Lamiaceae family, endemic of the W Aegean island of Evvia (Trigas and Iatrou, 2006). With a chromosome number of 34, it can be found in Northern Evvia at an altitude of 250–700 m, growing equally well on both serpentine and limestone substrate. The influence...... of serpentines in speciation processes in plants is well known (Kruckeberg, 1951, 1954, 1967; Proctor and Woodell, 1975). The endemism related to ultramafic substrate on Evvia, exhibits a mixture of evolutionary recent and older taxa, which can be grouped into certain categories with respect to their...

  9. Influence of salt stress on essential oil yield and composition of lemon grass (Cymbopogon schoenanthus L. Spreng. ssp. Laniger (Hook) Maire et Weil).

    Science.gov (United States)

    Khadhri, Ayda; Neffati, Mohamed; Smiti, Samira; Nogueira, José Manuel F; Araujo, Maria Eduarda M

    2011-01-01

    Cymbopogon is an aromatic plant valued for its citrus scent aroma. In this article, the effect of saline irrigation water on yield and quality of Cymbopogon schoenanthus L. was evaluated. Compounds of essential oils were identified by gas chromatography-mass spectrometry and/or (13)C-NMR spectroscopy. Results showed that the growth of the aerial part was not affected at a concentration of 50 mmol NaCl. Under salt stress, the content of major chemical compounds was affected differently by the treatment level. PMID:21246437

  10. Combining ability of tetraploid pollinator lines of sugar beet (Beta vulgaris L. ssp. vulgaris var. altissima Doell) by the elements of productivity

    OpenAIRE

    Корнєєва, М. О.; Чемерис, Л. М.; Мацук, М. Б.

    2013-01-01

    Evaluation of the genetic component values considered to be the important part of the selection process on creating hybrids of sugar beet and The aim of the study is to determine tetraploid pollinators combining ability Bilotserkovskoy breeding on yield and sugar content and the genetic determination of the productivity elements and their phenotypic manifestations in first generation hybrids of sugar beet. The methods of test crossing on the type top cross of pollen sterile lines of Uuladivsk...

  11. Advanced backcross-QTL analysis in spring barley (H. vulgare ssp. spontaneum) comparing a REML versus a Bayesian model in multi-environmental field trials

    OpenAIRE

    Bauer, Andrea Michaela; Hoti, F.; von Korff, M.; Pillen, K.; Léon, J; Sillanpää, M. J.

    2009-01-01

    A common difficulty in mapping quantitative trait loci (QTLs) is that QTL effects may show environment specificity and thus differ across environments. Furthermore, quantitative traits are likely to be influenced by multiple QTLs or genes having different effect sizes. There is currently a need for efficient mapping strategies to account for both multiple QTLs and marker-by-environment interactions. Thus, the objective of our study was to develop a Bayesian multi-locus multi-environmental met...

  12. Sub-tropical urban environment affecting content and composition of non-structural carbohydrates of Lolium multiflorum ssp. italicum cv. Lema

    Energy Technology Data Exchange (ETDEWEB)

    Sandrin, Carla Zuliani; Figueiredo-Ribeiro, Rita de Cassia Leone; Carvalho, Maria Angela Machado de [Instituto de Botanica, Caixa Postal 3005, 01061-970 Sao Paulo, SP (Brazil); Carvalho Delitti, Welington Braz [Instituto de Biociencias, Universidade de Sao Paulo, Departamento de Ecologia, Caixa Postal 11461, 05422-970 Sao Paulo, SP (Brazil); Domingos, Marisa [Instituto de Botanica, Caixa Postal 3005, 01061-970 Sao Paulo, SP (Brazil)], E-mail: mmingos@superig.com.br

    2008-12-15

    This study analyzed the relationship between environmental factors, especially air pollution and climatic conditions, and non-structural carbohydrates (NSC) in plants of Lolium multiflorum exposed during 10 consecutive periods of 28 days at a polluted site (Congonhas) and at a reference site in Sao Paulo city (Brazil). After exposure, NSC composition and leaf concentrations of Al, Fe, Cu, Zn, Pb and Cd were measured. The seasonal pattern of NSC accumulation was quite similar in both sites, but plants at Congonhas showed higher concentrations of these compounds, especially fructans of low and medium degree of polymerization. Regression analysis showed that NSC in plants growing at the polluted site were explained by variations on temperature and leaf concentration of Fe (positive effect), as well as relative humidity and particulate material (negative effect). NSC in the standardized grass culture, in addition to heavy metal accumulation, may indicate stressing conditions in a sub-tropical polluted environment. - Particulate matter and air temperature increased non-structural carbohydrates in the standardized biomonitor grass in Sao Paulo.

  13. High frequency in vitro plantlet regeneration and antioxidant activity of Enicostema axillare(Lam. Raynal ssp. littoralis (Blume Raynal: An important medicinal plant

    Directory of Open Access Journals (Sweden)

    Kousalya Loganathan

    2014-09-01

    Conclusion: The present study not only enables reinforcement of wild plant populations using ex situ growth of individuals, but it also helps for high scale production of plantlets. A high correlation between antioxidant capacities and their total phenolic contents indicated that flavonoid compounds were a major contributor of antioxidant activity of both plants grown from nature and nodal culture.

  14. The fungi communities of the soil environment of Triticum aestivum and its forecrops: Hordeum vulgare, Vicia faba ssp. minor and Trifolium pratense

    OpenAIRE

    Elżbieta Pląskowska

    2014-01-01

    The species spectrum and abundance of the fungi communities were affected by the soil environment developed by wheat and its forecrops, and by atmospheric conditions. The fungi of the genus Fusarium were the greatest threat to winter wheat regardless of the forecrop. The field bean was the best forecrop to the wheat whereas spring barley was the worst.

  15. Ecological and anthropogenic drivers of Calabrian pine (Pinus nigra J.F. Arn. ssp. laricio (Poiret) Maire) distribution in the Sila mountain range

    OpenAIRE

    Nicolaci A; Travaglini D; Menguzzato G; Nocentini S; Veltri A; Iovino F

    2015-01-01

    The most well-known and vast Calabrian pine forests are in the Sila mountain range, southern Italy. In this paper, present-day distribution of Calabrian pine in the Sila district was analyzed and compared with forest maps dating back to 1935 in order to assess the changes in land use. Main ecological and anthropogenic factors affecting Calabrian pine forest distribution were investigated by logistic regression models to identify the most important predictors of Ca­labrian pine persistence, ex...

  16. An evaluation of the documented requirements of the SSP UIL and a review of commercial software packages for the development and testing of UIL prototypes

    Science.gov (United States)

    Gill, Esther Naomi

    1986-01-01

    A review was conducted of software packages currently on the market which might be integrated with the interface language and aid in reaching the objectives of customization, standardization, transparency, reliability, maintainability, language substitutions, expandability, portability, and flexibility. Recommendations are given for best choices in hardware and software acquisition for inhouse testing of these possible integrations. Software acquisition in the line of tools to aid expert-system development and/or novice program development, artificial intelligent voice technology and touch screen or joystick or mouse utilization as well as networking were recommended. Other recommendations concerned using the language Ada for the user interface language shell because of its high level of standardization, structure, and ability to accept and execute programs written in other programming languages, its DOD ownership and control, and keeping the user interface language simple so that multiples of users will find the commercialization of space within their realm of possibility which is, after all, the purpose of the Space Station.

  17. Effect of ionizing radiation on the morphology, physiology and growth of Leishmania ssp; Acao da radiacao ionizante sobre a morfologia, fisiologia e crescimento da Leishmania spp

    Energy Technology Data Exchange (ETDEWEB)

    Bonetti, Franco C.; Spencer, Patrick J.; Nascimento, Nanci do [Instituto de Pesquisas Energeticas e Nucleares (IPEN), Sao Paulo, SP (Brazil); Junior A, Heitor F. [Sao Paulo Univ., SP (Brazil). Faculdade de Medicina. Instituto de Medicina Tropical

    2000-07-01

    The Leishmania spp is a pathogenic protozoan, which cause different diseases in man. The human diseases, in America, caused by this group of protozoa are divided in cutaneous or tegumentar and visceral, known as kala-azar. In this work, our principal study object was the specie that causes tegumentar leishmaniasis, in Brazil. Metabolic studies of cellular respiration and proteins and nucleic acids synthesis were accomplished using radiation as a form of sterilizing the parasites without however affecting their immunogenic capacity The promastigotes forms of irradiated Leishmania spp were totally sterilized with the dose of 1500 Gy, with their reproductive and nucleic acids, as well as protein synthesis capacity blocked. (author)

  18. Respuesta de diferentes poblaciones de spongospora subterránea f. sp. subterranea a la rotación entre dos variedades de papa (solanum tuberosum ssp. andigena).

    OpenAIRE

    Jaramillo Villegas, Sonia; Botero Herrera, Juan Manuel

    2011-01-01

    En una zona papera del Oriente de Antioquia - Colombia, se realizaron tres experimentos, para conocer el comportamiento de las variedades ICA Puracé, considerada por los agricultores, como resistente a la sarna polvosa de la papa, y la variedad Diacol Capiro susceptible. Se pretendió evaluar si hay un efecto de la rotación, entre las dos variedades con diferentes poblaciones de Spongospora subterranea f sp. subterranea sobre la sarna polvosa. Se utilizaron quistosoros de 23 poblaciones de S. ...

  19. Dokazivanje antilisterijske aktivnosti bakteriocina iz soja Leuconostoc mesenteroides ssp. mesenteroides IMAU:10231 izolacijom bakterija mliječne kiseline, identifikacijom bakteriocina i eksperimentalnom primjenom u proizvodnji Sremskih kobasica

    OpenAIRE

    Vesković Moračanin, Slavica; Turubatović, Lazar; Škrinjar, Marija; Obradović, Dragojlo

    2013-01-01

    Bakterije mliječne kiseline imaju ključnu ulogu u proizvodnji fermentiranih mesnih proizvoda. Njihova metabolička aktivnost utječe na proces sazrijevanja, čime nastaje proizvod željenih senzorskih značajki, te se inhibira rast neželjenih mikroorganizama. Bakteriocini su izvanstanični peptidi ili proteinske molekule što suzbijaju rast srodnih vrsta mikroorganizama, a proizvode ih neke bakterije mliječne kiseline. Nastali bakteriocini selektivno i kompetitivno djeluju na okolnu mikrofloru, a ta...

  20. Identification of seroreactive proteins in the culture filtrate antigen of Mycobacterium avium ssp. paratuberculosis human isolates to sera from Crohn's disease patients.

    Science.gov (United States)

    Shin, A-Rum; Kim, Hwa-Jung; Cho, Sang Nae; Collins, Michael T; Manning, Elizabeth J B; Naser, Saleh A; Shin, Sung Jae

    2010-02-01

    The etiology of Crohn's disease (CD) is unresolved, but it is likely that an interplay of host genetic factors and environmental triggers is relevant. Mycobacterium paratuberculosis (MAP) has been focused upon as one of these triggers because it causes a similar chronic inflammatory bowel disease in animals. However, the differences among MAP antigens isolated from humans (H-MAP) and cattle (B-MAP) have not been well characterized. In this study, culture filtrate (CF) proteins from MAP isolates were tested with sera from CD patients and healthy controls in enzyme-linked immunosorbent assay (ELISA). Antibody produced by seven CD patients reacted differently according to the antigen source: strong reactivity was seen to H-MAP CF, but not to B-MAP CF. Six proteins, ModD, PepA, transaldolase, EchA9, MAP2120c, and MAP2950c, in H-MAP CF reacting specifically with CD patient sera were identified by liquid chromatography-electrospray ionization-MS. Bioinformatic analysis revealed that ModD and PepA were the same proteins reacting with sera from cattle infected with MAP. The elevated antibody responses of CD patients to rModD and rPepA were confirmed by ELISA (PMAP infections. The study also identified additional proteins potentially useful in the design of assays for human MAP infections. PMID:19878316

  1. Predicciones del crecimiento en poblaciones de pino laricio (Pinus nigra Arn. ssp. salzmannii) bajo diferentes escenarios futuros de cambio climático

    OpenAIRE

    Candel Pérez, David; Lucas Borja, Manuel Esteban; Linares Calderón, Juan Carlos

    2012-01-01

    La disminución de las precipitaciones y el incremento de la temperatura registrados en las últimas décadas, junto con el aumento de la probabilidad de ocurrencia de eventos extremos de sequía, hacen muy probable una mayor vulnerabilidad de las poblaciones forestales mediterráneas. Sin embargo, el impacto de los diferentes escenarios climáticos previstos para el futuro sobre el crecimiento de las especies forestales ha sido poco desarrollado. Analizamos el patrón de crecimiento del pino larici...

  2. Severe Wound Infection with Photobacterium damselae ssp. damselae and Vibrio harveyi, following a Laceration Injury in Marine Environment: A Case Report and Review of the Literature.

    Science.gov (United States)

    Hundenborn, Jörg; Thurig, Steffi; Kommerell, Mechthild; Haag, Heike; Nolte, Oliver

    2013-01-01

    Marine microorganisms are uncommon etiologies of skin and skin structure infections, that is, wound infections. We report a case of severe wound infection, caused by the marine Photobacterium damselae (Vibrionaceae), in a 64-year-old male patient, returning from Australia. The isolate tested positive for pPHDD1, a plasmid conferring high-level virulence. Furthermore, the wound was coinfected with Vibrio harveyi, a halophile bacterium, which has never been reported from human infections before. Identification was achieved by use of Matrix-Assisted Laser Desorption-Ionization Time of Flight Mass Spectrometry (MALDI-TOF) and confirmed by 16S rDNA sequencing. Data retrieval from bibliography was complicated since P. damselae has been renamed often with a number of synonyms present in the literature: Photobacterium damsela, Vibrio damselae, Vibrio damsela, Pasteurella damselae, and Listonella damsela. With all synonyms used as query terms, a literature search provided less than 20 cases published worldwide. A majority of those cases presenting as severe wound infection are even fatal following progression into necrotizing fasciitis. Management with daily wound dressing and antibiotic therapy (ofloxacin empirically, followed by doxycycline after availability of microbiology) led in the reported case to a favorable outcome, which seems to be, however, the exception based on a review of the available literature. PMID:24171004

  3. Tolerancia aL NaCI de plantas andaluzas de vid silvestre (Vitis vinifera L., ssp sylvestris (sylvestris (Gmelin) Hegi)

    OpenAIRE

    Rivasplata, Paula E.

    2005-01-01

    Entre las causas principales que afectan al crecimiento de las plantas, se encuentra el estrés generado por diferentes factores de naturaleza tanto biótica como abiótica, de tal manera que la planta no puede desarrollarse debidamente y, en consecuencia, reproducirse en forma adecuada. El estrés salino es uno de las factores abióticos más extendidos, que, además, como es bien conocido, es uno de los máximos responsables de la limitación e incluso de la inhibición del desarrollo de las plantas....

  4. Early establishment response of different Pinus nigra ssp. salzmanii seed sources on contrasting environments: Implications for future reforestation programs and assisted population migration.

    Science.gov (United States)

    Taïbi, K; del Campo, A D; Aguado, A; Mulet, J M

    2016-04-15

    Forest restoration constitutes an important issue within adaptive environmental management for climate change at global scale. However, effective implementation of these programs can only be achieved by revising current seed transfer guidelines, as they lack inherent spatial and temporal dynamics associated with climate change. In this sense, provenance trials may provide key information on the relative performance of different populations and/or genotypes under changing ecological conditions. This study addresses a methodological approach to evaluate early plantation performance and the consequent phenotypic plasticity and the pattern of the adaptation of different seed sources in contrasting environments. To this end, six seed sources of Salzmann pine were tested at three contrasting trial sites testing a hypothetical assisted population migration. Adaptation at each site was assessed through Joint Regression and Additive Main effect and Multiplication Interaction (AMMI) models. Most of the observed variation was attributed to the environment (above 90% for all traits), even so genotype and genotype by environment interaction (GxE) were significant. Seedlings out-planted under better site conditions did not differ in survival but in height growth. However, on sites with higher constraints, survival differed among seed sources and diameter growth was high. The adaptation analyses (AMMI) indicated that the cold-continental seed source 'Soria' performed as a generalist seed source, whereas 'Cordilleras Béticas', the southernmost seed source, was more adapted to harsh environments (frost and drought) in terms of survival. The results supported partially the hypothesis that assisted migration of seed sources makes sense within limited transfer distances, and this was reinforced by the GxE results. The present study could be valuable to address adaptive transfer of seedings in ecological restoration and to determine the suitable seed sources for reforestation programs and assisted population migration under climatic changes. The reported results are based on 3 years' data and need to be considered in this context. PMID:26897555

  5. A confusing case of canine vector-borne disease: clinical signs and progression in a dog co-infected with Ehrlichia canis and Bartonella vinsonii ssp. berkhoffii

    OpenAIRE

    Maggi Ricardo G; Breitschwerdt Edward B

    2009-01-01

    Abstract Bartonella spp. are important pathogens in human and veterinary medicine, and bartonellosis is considered as an emerging zoonosis that is being reported with increasing frequency. Of 22 known species and subspecies of Bartonella, seven have been isolated from dogs, causing disease manifestations similar to those seen in human beings. The wide variety of clinical signs and the possible chronic progression of disease manifestations are illustrated in the case of an infected Labrador re...

  6. Growth temperature affects sensory quality and contents of glucosinolates, vitamin C and sugars in swede roots (Brassica napus L. ssp. rapifera Metzg.).

    Science.gov (United States)

    Johansen, Tor J; Hagen, Sidsel F; Bengtsson, Gunnar B; Mølmann, Jørgen A B

    2016-04-01

    Swede is a root vegetable grown under a range of growth conditions that may influence the product quality. The objective of this controlled climate study was to find the effect of growth temperature on sensory quality and the contents of glucosinolates, vitamin C and soluble sugars. High temperature (21 °C) enhanced the intensities of sensory attributes like pungent odour, bitterness, astringency and fibrousness, while low temperature (9 °C) was associated with acidic odour, sweet taste, crispiness and juiciness. Ten glucosinolates were quantified, with progoitrin as the dominant component followed by glucoberteroin, both with highest content at 21 °C. Vitamin C also had its highest content at 21 °C, while the total sugar content was lowest at this temperature. In conclusion, the study demonstrated clear effects of growth temperature on sensory quality and some chemical properties of swede and indicated a good eating quality of swedes grown at low temperatures. PMID:26593487

  7. Biodiversity of Dominant Cultivable Endophytic Bacteria Inhabiting Tissues of Six Different Cultivars of Maize (Zea mays L. ssp. mays) Cropped under Field Conditions.

    Science.gov (United States)

    Pisarska, Katarzyna; Pietr, Stanisław Jerzy

    2015-01-01

    Endophytic bacteria (EnB) play a crucial role in plant development. This study was an attempt to isolate and identify dominant cultivable EnB inhabiting young seedlings germinated in vitro and leaves of six maize cultivars grown under field conditions at temperate climate zone with culture-dependent approach. We isolated bacteria from field cropped maize only. Strains were identified based on 16S rRNA gene sequencing. In particular, members of Actinobacteria, Bacteroidetes, Firmicutes and α- and γ-Proteobacteria were found. Species of two genus Pseudomonas and Bacillus were dominant among them. Higher diversity of EnB was found in plants collected from Kobierzyce, where we identified 35 species from 16 genera with 22 species uniquely found at this field. On the contrary, from maize leaves collected at Smolice we identified 24 species representing 10 genera with 10 species uniquely isolated from this field. However, none of species was common for all cultivars at both locations. Among isolated EnB six species only, Pseudomonas clemancea, Pseudomonasfluorescens, Bacillus megaterium, Bacillus simplex, Arthrobacter nicotinovorans and Arthrobacter nitroguajacolicus, were found in aboveground parts of the same cultivar grown on both tested fields. The fact that the same cultivars, sown from the same lots of seeds, under field conditions on two different locations were colonized with noticeably different associations of cultivable EnB suggest that cultivar genotype is an important factor selecting endophytic bacteria from local agro-environment. To our knowledge this is first report about the significant variation of diversity of cultivable endophytic bacteria inhabiting aboveground parts of the same maize cultivars grown at different locations. PMID:26373177

  8. Phylloxera (Daktulosphaira vitifoliae Fitch) alters the carbohydrate metabolism in root galls to allowing the compatible interaction with grapevine (Vitis ssp.) roots.

    Science.gov (United States)

    Griesser, Michaela; Lawo, Nora Caroline; Crespo-Martinez, Sara; Schoedl-Hummel, Katharina; Wieczorek, Krzysztof; Gorecka, Miroslawa; Liebner, Falk; Zweckmair, Thomas; Stralis Pavese, Nancy; Kreil, David; Forneck, Astrid

    2015-05-01

    Gall forming phylloxera may compete for nutrients with meristematic tissues and develop heterotrophic structures that act as carbon sinks. In this work, we studied the underlying starch metabolism, sink-source translocation of soluble sugars towards and within root galls. We demonstrated that nodosities store carbohydrates by starch accumulation and monitored the expression of genes involved in the starch metabolic. Thereby we proved that the nodosity is symplastically connected to the source tissues through its development and that the starch metabolism is significantly affected to synthesize and degrade starch within the gall. Genes required for starch biosynthesis and degradation are up-regulated. Among the carbohydrate transporters the expression of a glucose-6-phosphate translocater, one sucrose transporter and two SWEET proteins were increases, whereas hexose transporters, tonoplast monosaccharide transporter and Erd6-like sugar transporters were decreased. We found general evidence for plant response to osmotic stress in the nodosity as previously suggested for gall induction processes. We conclude that nodosities are heterogenous plant organs that accumulate starch to serve as temporary storage structure that is gradually withdrawn by phylloxera. Phylloxera transcriptionally reprograms gall tissues beyond primary metabolism and included downstream secondary processes, including response to osmotic stress. PMID:25804808

  9. Phylloxera (Daktulosphaira vitifoliae Fitch) alters the carbohydrate metabolism in root galls to allowing the compatible interaction with grapevine (Vitis ssp.) roots

    OpenAIRE

    Griesser, Michaela; Lawo, Nora Caroline; Crespo-Martinez, Sara; Schoedl-Hummel, Katharina; Wieczorek, Krzysztof; Gorecka, Miroslawa; Liebner, Falk; Zweckmair, Thomas; Stralis Pavese, Nancy; Kreil, David; Forneck, Astrid

    2015-01-01

    Gall forming phylloxera may compete for nutrients with meristematic tissues and develop heterotrophic structures that act as carbon sinks. In this work, we studied the underlying starch metabolism, sink-source translocation of soluble sugars towards and within root galls. We demonstrated that nodosities store carbohydrates by starch accumulation and monitored the expression of genes involved in the starch metabolic. Thereby we proved that the nodosity is symplastically connected to the source...

  10. Early interspecific interference in the wheat/faba bean (Triticum aestivum/ Vicia faba ssp. minor and rapeseed/squarrosum clover (Brassica napus var. oleifera/Trifolium squarrosum intercrops

    Directory of Open Access Journals (Sweden)

    Paolo Benincasa

    2012-04-01

    Full Text Available Most of research on intercrops evaluate performances and interference between species on the basis of final yield, while little knowledge is available on the interference in early stages and at the root level, at least for cultivated intercrops. In fact, in the few studies on this subject species are often combined minding at experimental needs (e.g. common substrate, temperature and water requirements, easy root separation more than at their actual use in the farm. The present work evaluates interspecific interference during early developmental stages for two intercrops of agricultural interest: soft wheat-faba bean and rapeseed-squarrosum clover. Improving this knowledge would help intercrop growth modelling and rational cultivation. The experiments were carried out on soft wheat (Triticum aestivum, faba bean (Vicia faba var. minor, rapeseed (Brassica napus var. oleifera and squarrosum clover (Trifolium squarrosum, germinated and grown until 32 days after sowing (DAS as one-species stands or as wheat/faba bean and rapeseed/squarrosum clover intercrops, with different densities and proportions for the two species in each couple. Germination was studied in controlled-temperature chamber, plantlet growth was studied on pots in the greenhouse. During germination no interspecific interference was observed for both wheat/faba bean and rapeseed/squarrosum clover intercrops. During plantlet growth, interspecific interference occurred in both intercrops causing variations in whole plant and root dry matter accumulation. In the wheat/faba bean intercrop each species suffered from the competitive effect of the companion species and faba bean was the dominant species when present in lower proportion than wheat. The unexpectedly high aggressivity of faba bean may be explained either with the greater seed size that could have represented an initial advantage within the short duration of the experiment or with the competition towards wheat for substrate N which is not usual in the open field for a N fixing species. In the rapeseed/squarrosum clover intercrop, rapeseed was facilitated by squarrosum clover, while squarrosum clover suffered from the competitive effect of rapeseed, which was the dominant species. The resource use efficiency of intercrops as compared to that of one-species crops was lower in the wheat/faba bean couple, not much different in the rapeseed/squarrosum clover one. In both couples, the best performance was observed when the ratio of the dominant species was lower than that of the companion species (number of plants in the ratio 1:3.

  11. Cloning and comparative analysis of carotenoid β-hydroxylase genes provides new insights into carotenoid metabolism in tetraploid (Triticum turgidum ssp. durum) and hexaploid (Triticum aestivum) wheat grains

    OpenAIRE

    Qin, X.; Zhang, W.; Dubcovsky, J; Tian, L.

    2012-01-01

    Carotenoid β-hydroxylases attach hydroxyl groups to the β-ionone rings (β-rings) of carotenoid substrates, resulting in modified structures and functions of carotenoid molecules. We cloned and characterized two genes (each with three homeologs), HYD1 and HYD2, which encode β-hydroxylases in wheat. The results from bioinformatic and nested degenerate PCR analyses collectively suggest that HYD1 and HYD2 may represent the entire complement of non-heme di-iron β-hydroxylases in wheat. The homeolo...

  12. The Effect of Drought Stress on Grain Yield, Yield Components and Some Quality Traits of Durum Wheat (Triticum turgidum ssp. durum) Cultivars

    OpenAIRE

    Hasan KILIÇ; Tacettin YAĞBASANLAR

    2010-01-01

    Drought, one of the environmental stresses, is the most significant factor restricting plant production in the majority of agricultural fields of the world. Wheat is generally grown on arid-agricultural fields. Drought often causes serious problems in wheat production areas. A field study was conducted on clay-silt soil, in the Research Field, Southeastern Anatolia Agricultural Research Institute, in Diyarbakır during 1999-2000 growing season in order to evaluate genotypes for yield, yield co...

  13. Empirical rheology and pasting properties of soft-textured durum wheat (Triticum turgidum ssp. durum) and hard-textured common wheat (T. aestivum)

    Science.gov (United States)

    Puroindoline (PIN) proteins are the molecular basis for wheat kernel texture classification and affect flour milling performance. This study aimed at investigating the effect of PINs on kernel physical characteristics and dough rheological properties of common wheat (Alpowa cv, soft wheat) and durum...

  14. Kinetics of Changes in Glucosinolate Concentrations during Long-Term Cooking of White Cabbage (Brassica oleracea L. ssp. capitata f. alba)

    NARCIS (Netherlands)

    Volden, J.; Wicklund, T.; Verkerk, R.; Dekker, M.

    2008-01-01

    Brassica vegetables are the predominant dietary source of glucosinolates (GLS) that can be degraded in the intestinal tract into isothiocyanates, which have been shown to possess anticarcinogenic properties. The effects of pilot-scale long-term boiling on GLS in white cabbage (Brassica oleracea L. s

  15. Biological and Morphological Aspects of Anoxia (Mesanoxia) matutinalis ssp. matutinalis Castelnau, 1832 (Coleoptera, Melolonthidae), a Pest of Apulian Pinewoods in Southern Italy

    OpenAIRE

    Eustachio Tarasco; Oreste Triggiani

    2011-01-01

    Huge defoliations by Anoxia (Mesanoxia) matutinalis spp. matutinalis Castelnau, 1832 (Coleoptera, Scarabeidae) have been observed in recent years in the coastal pinewoods (Pinus halepensis, P. pinea) of the southern Apulia Region of Italy. Starting from adults collected in the field, insect breeding was conducted in the laboratory, following the life-cycle from ovideposition to larval development and emergence. Observations were performed in the laboratory and the field to study the different...

  16. Iridoids from Scutellaria goulimyi Rech. f., Lamiaceae. Morphological and chemical relations with Scutellaria albida L. ssp albida

    OpenAIRE

    Gousiadou, Chrysoula; Gotfredsen, Charlotte Held; Jensen, Søren Rosendal; Tsoukalas, Michail

    2012-01-01

    Scutellaria goulimyi is a plant of the Lamiaceae family, endemic of the W Aegean island of Evvia (Trigas and Iatrou, 2006). With a chromosome number of 34, it can be found in Northern Evvia at an altitude of 250–700 m, growing equally well on both serpentine and limestone substrate. The influence of serpentines in speciation processes in plants is well known (Kruckeberg, 1951, 1954, 1967; Proctor and Woodell, 1975). The endemism related to ultramafic substrate on Evvia, exhibits a mixture of ...

  17. RESPUESTA DE DIFERENTES POBLACIONES DE Spongospora subterranea f. sp. subterranea A LA ROTACIÓN ENTRE DOS VARIEDADES DE PAPA (Solanum tuberosum ssp. andigena RESPONSE OF DIFFERENT POPULATIONS OF Spongospora subterranea f .sp. subterranea TO ROTATION OF TWO POTATO CULTIVARS (Solanum tuberosum ssp. andigena

    Directory of Open Access Journals (Sweden)

    Sonia Jaramillo Villegas

    2007-12-01

    Full Text Available En una zona papera del Oriente de Antioquia - Colombia, se realizaron tres experimentos, para conocer el comportamiento de las variedades ICA Puracé, considerada por los agricultores, como resistente a la sarna polvosa de la papa, y la variedad Diacol Capiro susceptible. Se pretendió evaluar si hay un efecto de la rotación, entre las dos variedades con diferentes poblaciones de Spongospora subterranea f sp. subterranea sobre la sarna polvosa. Se utilizaron quistosoros de 23 poblaciones de S. subterranea, extraídos de pústulas presentes en tubérculos o agallas en raíces de diferentes variedades, y procedentes de las regiones más productoras de papa en el país. Se determinó la incidencia y el grado de severidad de dichas poblaciones bajo el proceso de rotación entre ICA Puracé-Diacol Capiro y viceversa, en tres cosechas sucesivas, en condiciones de casa de malla. Se observó que las poblaciones del patógeno, no afectaron el peso, ni causaron síntomas de sarna polvosa en los tubérculos, pero si en las raíces, con diferentes grados de severidad en las dos variedades, con tendencia poco predecible en las distintas cosechas, con niveles bajo (> 0 a 2, medio (> 2 a 6 y alto (>6, siendo mas susceptible la Diacol Capiro, que al parecer favoreció el incremento del inóculo. Diacol Capiro, presentó alta incidencia (23/23 y severidad (algunas poblaciones con grado >6 en el primer ciclo, mientras que la ICA Puracé fue levemente afectada por pocas poblaciones (7/23 de S. subterranea y posiblemente presentó efecto supresivo sobre los quistosoros en el suelo en la rotación (segundo ciclo, puesto que se redujo el grado de severidad (In Antioquia Colombia were realized three experiments with potatoes, to know the behavior of the ICA Puracé cultivar, considered by agricultures as powder scab resistant, and the Diacol Capiro cultivar, which is highly susceptible. It is pretended to evaluate if there is a rotation effect, of the two varieties and different populations of Spongospora subterranea f. sp. subterranea on the powder scab. Cistosori (spore balls was extracted from 23 populations of S. subterranea extracted from pustules in tubers surface or galls in roots from different varieties, from potato regions of Colombia . The incidence and severity degree of these populations was evaluated under the process of the ICA Puracé-Diacol Capiro rotation and viceversa, in three successive harvests, under the mesh house conditions. It was observed that the different pathogen populations did not affect the weight, neither caused powder scab symptoms in the tubers, although presented different severity levels on the roots of two varieties with unpredictable tendency during the different harvests, with low level (> 0 to 2, medium (>2 to 6 and high (>6 symptoms, being more susceptible the Diacol Capiro, which apparently incremented the infection in the soil. The ICA Puracé was low level affected by few population (7/23 with the powder scab, during the first cycle and possibly presented a suppressive effect over the powdery scab for the Diacol Capiro rotation in the second harvest, and then, a rising in the galls of both varieties during the third harvest, in the pots where originally planted, because of a possible increasing of cistosori in the soil. The initial rotation reduces the powder scab symptoms (second harvest in Diacol Capiro, but the ICA Puracé cultivar is more affected trough the generations where Diacol Capiro was growing.

  18. Scientific Opinion on the safety and efficacy of Biomin®C3 (Bifidobacterium animalis ssp. animalis, Lactobacillus salivarius ssp. salivarius and Enterococcus faecium as feed additive for chickens for fattening, chickens reared for laying and minor avian species other than laying species

    Directory of Open Access Journals (Sweden)

    EFSA Panel on Additives and Products or Substances used in Animal Feed (FEEDAP

    2015-01-01

    Full Text Available Biomin®C3 is a preparation of strains of Enterococcus faecium, Bifidobacterium animalis and Lactobacillus salivarius. It is currently authorised in the European Union for use in feed for chickens for fattening. Application now has been made for an extension of use to chickens reared for laying and minor avian species other than laying species, for use in water for drinking and for the removal of a maximum dose. A tolerance study using water as the delivery system showed that consumption of 100 times the currently authorised maximum authorised dose in feed did not cause adverse effects in chickens for fattening. Thus, delivery of comparable doses of the additive via water for drinking is considered to be as safe for chickens for fattening as delivery via feed. Inclusion of a dose of 5 × 1012 colony-forming units (CFU/L in the tolerance study without ill effects indicates that there would be no safety implications if the current maximum dose for chickens for fattening were withdrawn. The conclusions on safety for chickens for fattening, including the need for a maximum dose, would also apply to chickens reared for laying and minor avian species to the point of lay. Biomin®C3 has the potential to improve the performance of chickens for fattening at a minimum dose of 1 × 108< CFU/kg of complete feedingstuffs or the equivalent dose (5 × 107 CFU/L when delivered in water for drinking. The additive is also considered to have the potential to be efficacious when used in chickens reared for laying and minor avian species to the point of lay at a minimum dose of 1 × 108 CFU/kg of complete feedingstuffs or 5 × 107 CFU/L water for drinking. The additive is compatible with the coccidiostats robenidine hydrochloride, maduramycin ammonium, diclazuril, decoquinate, narasin, nicarbazin and narasin/nicarbazin.

  19. Formulação e estabilidade de corantes de antocianinas extraídas das cascas de jabuticaba (Myrciaria ssp.
    Formulation and stability of anthocyanins’s colorants formulated with peels jabuticaba (Myrciaria ssp.

    Directory of Open Access Journals (Sweden)

    G. J. F. SILVA

    2010-12-01

    Full Text Available

    A busca de fontes alternativas de pigmentos naturais tem estimulado o desenvolvimento de pesquisas em diferentes frutos tropicais, como a jabuticaba. Esse fruto é rico em antocianinas, um pigmento natural que, além da capacidade de conferir cor, também possui capacidade antioxidante na captura de radicais livres, responsáveis, dentre outras ações, pela proliferação de células tumorais e pelo envelhecimento precoce. Assim, o objetivo dessa pesquisa foi caracterizar e avaliar a estabilidade de corantes formulados a partir de cascas de jabuticaba. Os pigmentos naturais desse fruto foram associados a dois veículos estabilizantes (maltodextrina e goma arábica em três proporções diferente, submetidos ao processo de atomização e expostos a luz a uma temperatura de 25 ± 2°C, comparando-se com amostras controle não expostas a luz, armazenadas a 10 ± 2°C. A estabilidade foi avaliada através de análises de antocianinas totais, polifenóis totais, atividade antioxidante e avaliação colorimétrica. Os corantes apresentaram elevados teores de antocianinas (p0,05, tendo havido maiores degradações nas amostras armazenadas sob incidência de luz a 25°C (p0,05, evidenciando o efeito deletério da luz sob esses compostos. Comparando as três proporções dos dois carboidratos utilizados, os pigmentos antociânicos mostraram-se mais estáveis quando utilizados somente o carboidrato maltodextrina na proporção de 30%. Portanto, as cascas de jabuticaba apresentaram-se como boas fontes de pigmentos naturais, apresentando-se como alternativa viável na obtenção de corantes.

  20. Biological and Morphological Aspects of Anoxia (Mesanoxia) matutinalis ssp. matutinalis Castelnau, 1832 (Coleoptera, Melolonthidae), a Pest of Apulian Pinewoods in Southern Italy Aspetos da Biologia e Morfologia da Anoxia (Mesanoxia) matutinalis ssp. matutinalis Castelnau, 1832 (Coleoptera, Melolonthidae), Praga nos Pinhais da Apúlia, Sul de Itália

    OpenAIRE

    Eustachio Tarasco; Oreste Triggiani

    2011-01-01

    Huge defoliations by Anoxia (Mesanoxia) matutinalis spp. matutinalis Castelnau, 1832 (Coleoptera, Scarabeidae) have been observed in recent years in the coastal pinewoods (Pinus halepensis, P. pinea) of the southern Apulia Region of Italy. Starting from adults collected in the field, insect breeding was conducted in the laboratory, following the life-cycle from ovideposition to larval development and emergence. Observations were performed in the laboratory and the field to study the different...

  1. SR-XRF analysis of Polytrichum in the Fildes Peninsula, Antarctica

    Institute of Scientific and Technical Information of China (English)

    沈显生; 康士秀; 孙立广; 尹雪斌; 吴自勤; 何伟

    2002-01-01

    In order to study the element contents and distribution of various mosses collected in the Antarctica, we analyzed the heavy elements of 3 species of Polytrichum in the Fildes Peninsula, P. alpinum, P. juniperinum and P. alpestre, by synchrotron radiation X-ray fluorescence (SR-XRF). The result shows that the elements, such as K, Ca, Mn, Fe, Cu, Zn and Sr, are nearly the same in Polytrichum. The peak intensity of K is higher than that of Ca, and the peak intensity of Ca is higher than that of Fe in P. alpinum. In P. juniperinum, the peak intensity of K is higher than that of Ca, and the peak intensity of Ca is close to that of Fe. The peak intensity of K is nearly equal to those of Ca and Fe in P. alpestre. Therefore, the habitats of 3 species of Polytrichum are similar in the Fildes Peninsula. By XRF analyzing of different parts of P. alpestre, we found that the peak intensities of relative concentration of elements are obviously different. The peak intensity of K in apical-bud is the highest in organism. The peak intensity ratio of K/Ca is 1.30, but they are below 1.0 in all the other parts. The peak intensity of Mn in pseudo-root is the highest in organism, and the peak intensity ratio of Mn/Fe is 0.21, the biggest. In the parts of older leaf and pseudo-root, the ratios of Cu/Zn are 1.20 and 1.84 respectively, whereas they are less than 1 in the other parts. The element Br is seen specially in the older leaf and pseudo-root, that may result from the organs aged, and enhance the ability of anti-rottenness itself.

  2. Dicty_cDB: Contig-U12527-1 [Dicty_cDB

    Lifescience Database Archive (English)

    Full Text Available osoma mansoni genome sequenc... 39 0.72 EU189476_1( EU189476 |pid:none) Thlaspi alpestre flagel...idium botulinum F str. Langeland, complete ... 40 1e-04 19 ( AJ938182 ) Staphylococcus aureus RF122 complete gen...Lycopersicon hirsutum Cf-4 resista... 40 0.32 AC148607_8( AC148607 |pid:none) Medicago truncatula clone... max cultivar PI 507471 LRR... 39 0.55 CR954206_355( CR954206 |pid:none) Ostreococcus tauri strain OTTH05......) Dictyostelium discoideum chromosome 2 map 4229098-4354721 strain AX4, complete sequence. Length = 712 Score

  3. Resistance to antimicrobials and acid and bile tolerance of Bacillus spp isolated from Bikalga, fermented seeds of Hibiscus sabdariffa

    DEFF Research Database (Denmark)

    Compaore, Clarisse S.; Jensen, Lars Bogø; Diawara, Brehima;

    2013-01-01

    In the aim of selecting starter cultures, thirteen species of Bacillus spp. including six Bacillus subtilis ssp. subtilis, four Bacillus licheniformis and three Bacillus amyloliquefaciens ssp. plantarum isolated from traditional Bikalga were investigated. The study included, for all isolates, gen...

  4. Shared Savings Program Accountable Care Organizations PUF

    Data.gov (United States)

    U.S. Department of Health & Human Services — SSP ACO PUF - To address the increasing number of requests for SSP ACO data, the Centers for Medicare (CM) has created a standard analytical file that CMS can use...

  5. Can Power from Space Compete?

    OpenAIRE

    Macauley, Molly; Darmstadter, Joel; Fini, John; Greenberg, Joel; Maulbetsch, John; Schaal, A. Michael; Styles, Geoffrey; Vedda, James

    2000-01-01

    Satellite solar power (SSP) has been suggested as an alternative to terrestrial energy resources for electricity generation. In this study, we consider the market for electricity from the present to 2020, roughly the year when many experts expect SSP to be technically achievable. We identify several key challenges for SSP in competing with conventional electricity generation in developed and developing countries, discuss the role of market and economic analysis as technical development of SSP...

  6. Study of physiological properties of some probiotics in multiple cultures with mesophilic lactic acid bacteria by Flora Danica Ch. Hansen commercial starter

    OpenAIRE

    DANIELA PARASCHIV; AIDA VASILE; MADALINA CONSTANTIN; ALEXANDRU CIOBANU; GABRIELA BAHRIM

    2011-01-01

    The aim of this study was to establish the growth ability and stability of probiotic strains Lactobacillus acidophilus (commercial code La-5®), Lactobacillus casei ssp. paracasei (commercial code L. casei 431®) and Bifidobacterium bifidus (commercial code BB-12®) in multiple cultures with mesophilic lactic bacteria, Lactococcus lactis ssp. cremoris, Lactococcus lactis ssp. lactis, Lactococcus lactis ssp. diacetylactis and Leuconostoc mesenteroides spp. cremoris, as Flora Danica Chr. Hansen co...

  7. The Role of Responsibility Factors of Reducing Inefficiencies in IS Projects on Six Sigma Certification in Service Organizations

    OpenAIRE

    Sara Hejazi; Yair Levy

    2012-01-01

    Service organizations worldwide are turning to Six Sigma Program (SSP) to remove variability in their processes to attain a competitive marketplace advantage. SSP offers methodology, concepts, and statistical tools to understand and standardize processes by reducing sources of variability. An effective “Belt†certification program, considered a major contributor to successful implementation of SSP as it provides the SSP professionals a clear understanding of what their responsibilities sho...

  8. Gestión forestal de Pinus Nigra Arn. ssp.salzmannii bajo el contexto de cambio climático: bases ecológicas y genéticas

    OpenAIRE

    Candel Pérez, David

    2014-01-01

    El aumento de las concentraciones de gases relacionados con el efecto invernadero, asociado a cambios en el clima y contaminación atmosférica afectará a los ecosistemas forestales de forma que todavía se desconoce. Los árboles, con ciclos de vida muy superiores a los de las plantas anuales, se verán afectados por los rápidos cambios que se están generando en el régimen de temperaturas y precipitaciones, ya que son incapaces de responder con mecanismos de migración o selección genética en cort...

  9. Joint annual meeting of the Austrian physical society, Swiss physical society, Austrian society of astronomy and astrophysics in Innsbruck. Bulletin SPG / SSP Vol 26, 2009; OEPG Tagungsband Nr. 59

    International Nuclear Information System (INIS)

    This was the first joint annual meeting of the Austrian physical society, the Swiss physical society and the Austrian society of astronomy and astrophysics with the participation of the Swiss society for astrophysics and astronomy. Its objective was to improve the scientific communication and cooperation of researchers of both countries in all fields of physics and astronomy. The plenary sessions gave an overview of the present status from topics such as atomic clusters interactions to nuclear physics and physics of nanostructures. The topical sessions were dedicated to: atomic- and molecular physics and quantum optics; applied physics (medical physics, thin films, molecular physics and materials); nuclear and particle physics (nuclear physics, colliders (LHCb, Belle, CMS I, CMS II and HERA, ATLAS I and II, PANDA), low and medium energy (UCN, OPERA), astrophysics and particle physics; plasma physics; solid state physics (x-rays and neutrons, spins, magnetism, nano and photonics); surfaces, boundary layers and thin films; history of physics and physics in the school. Those contributions which are in the INIS subject scope are indexed individually. (nevyjel)

  10. Using liquid chromatography-mass spectrometry based metabolomics to discriminate between cold pressed rice bran oils produced from two different cultivars of Oryza sativa L. ssp. indica in Thailand

    Institute of Scientific and Technical Information of China (English)

    Tossaton CHAROONRATANA; Thanapat SONGSAK; Apirak SAKUNPAK; Pathamaporn PATHOMPAK; Laksana CHAROENCHAI

    2015-01-01

    A newly developed liquid chromatography⁃mass spectrometry ( LC⁃MS) method for the analysis of cold pressed rice bran oil ( RBO) was established and used to discriminate between RBOs produced from two different cultivars of major Thai fragrant rice species. The cold pressed RBO was prepared using the screw com⁃pression method. The LC⁃MS data were preprocessed with MZmine 2�10 program before evaluating with princi⁃pal component analysis using SIMCA 13 software. The LC⁃MS method was able to detect and quantify several kinds of valuable constituents such as fatty acids, vitamin E, and γ⁃oryzanol. The chromatographic condition was feasible;short time for analysis and simple method were achieved. From score plot and loading plot of principle component analysis ( PCA) , two rice cultivar samples were clearly separated, and it was revealed that Khao⁃Hom⁃Pathum was more suitable than Khao⁃Hom⁃Mali for cold pressed RBO production since it contained high total γ⁃oryzanol and less saturated free fatty acids. As with the fixed price of all the rice brans, this infor⁃mation can be used in order to, if possible, preserve the price of rice brans from different cultivars.

  11. Unravelling the importance of forest age stand and forest structure driving microbiological soil properties, enzymatic activities and soil nutrients content in Mediterranean Spanish black pine(Pinus nigra Ar. ssp. salzmannii) Forest.

    Science.gov (United States)

    Lucas-Borja, M E; Hedo, J; Cerdá, A; Candel-Pérez, D; Viñegla, B

    2016-08-15

    This study aimed to investigate the effects that stand age and forest structure have on microbiological soil properties, enzymatic activities and nutrient content. Thirty forest compartments were randomly selected at the Palancares y Agregados managed forest area (Spain), supporting forest stands of five ages; from 100 to 80years old to compartments with trees that were 19-1years old. Forest area ranging from 80 to 120years old and without forest intervention was selected as the control. We measured different soil enzymatic activities, soil respiration and nutrient content (P, K, Na, Mg, Cr, Mn, Fe, Co, Ni, Cu, Zn, Pb and Ca) in the top cm of 10 mineral soils in each compartment. Results showed that the lowest forest stand age and the forest structure created by management presented lower values of organic matter, soil moisture, water holding capacity and litterfall and higher values of C/N ratio in comparison with the highest forest stand age and the related forest structure, which generated differences in soil respiration and soil enzyme activities. The forest structure created by no forest management (control plot) presented the highest enzymatic activities, soil respiration, NH4(+) and NO3(-). Results did not show a clear trend in nutrient content comparing all the experimental areas. Finally, the multivariate PCA analysis clearly clustered three differentiated groups: Control plot; from 100 to 40years old and from 39 to 1year old. Our results suggest that the control plot has better soil quality and that extreme forest stand ages (100-80 and 19-1years old) and the associated forest structure generates differences in soil parameters but not in soil nutrient content. PMID:27099995

  12. Padrão estomático de Capsicum ssp. resistentes e suscetíveis a Oidiopsis haplophylli Stomatal patterns of Capsicum genotypes resistant or susceptible to Oidiopsis haplophylli

    Directory of Open Access Journals (Sweden)

    Milton Luiz Paz Lima

    2010-03-01

    Full Text Available Visando relacionar a reação de Capsicum spp. resistentes e suscetíveis à Oidiopsis haplophylli com o padrão dos respectivos complexos estomáticos, foram analisados em dois ensaios, 5 e 15 genótipos de Capsicum spp. em delineamento inteiramente casualizado. Avaliou-se a abertura do ostíolo, a morfometria do estômato (comprimento, largura e área, o número de estômatos.mm-2 e a freqüência de estômatos (unidades de estômatos por células da epiderme nas superfícies adaxial e abaxial da epiderme foliar de plantas cultivadas em casa-de-vegetação. A variável abertura ostiolar não explicou a reação dos genótipos ao oídio, nem na face adaxial (R²=0,16 nem na abaxial (R²=0,13. Entretanto, o número de estômatos.mm-2 explicou a reação ao oídio em 84 % (face adaxial ou 74 % (face abaxial. Para a freqüência de estômatos, o modelo ajustou-se melhor na face adaxial (R² = 0,76, do que na face abaxial (R²=0,48. Maiores números e freqüências de estômatos em ambas as faces foliares ocorreram em pimentão 'Magali' (altamente suscetível, com valores significativamente maiores do que em 'HV-12' (altamente resistente. Sugere-se que a suscetibilidade de genótipos de Capsicum a O. haplophylli está parcialmente relacionada a mecanismos de defesa estruturais pré-formados, como o número e freqüência de estômatos, os quais se relacionam com o número de sítios de infecção. Por outro lado, para alguns genótipos, esta relação não foi significativa, indicando que outros mecanismos de resistência também estejam envolvidos.This work reports the reaction of Capsicum genotypes to the powdery mildew pathogen with variables of the stomatal complex, from samples of five to 15 Capsicum genotypes in a complete randomized experiments. Ostiolum size, stomatal morphometry (length, width and surface area, the number of stomata.mm-2, and the frequency of stomata (stomatal units per unit of epidermal cells were evaluated on both leaf epidermal surfaces of plants growing in greenhouse. The variable ostiolum size did not explain the genotype reaction to the mildew, neither in the upper (R²=0.16 or lower leaf surfaces (R²=0.13. Nevertheless, the number of stomata.mm-2, on the upper or lower leaf surfaces, explained 84 % to 74 % of the genotype reaction, respectively. For the relation between stomatal frequency and host reaction, a better fit was found with the number of stoma in the upper leaf surface (R²=0.76, than with number in the lower leaf surface (R²=0.48. Sweet pepper 'Magali' (highly susceptible had the largest numbers and frequency of stomata on both leaf surfaces at both experiments, which were significantly higher than in 'HV-12' (highly resistant. We suggest that the susceptibility of Capsicum to O. haplophylli may be partially related to pre-formed structural defense mechanisms, such as number of stomata, which relates to the number of infection sites. However, the low correlation of the disease and variables of the stomatal complex among some genotypes, indicates that other mechanisms might be involved with the expression of resistance in Capsicum to powdery mildew.

  13. 温度胁迫对豇豆种子萌发生理指标的影响%The Effect of Temperature Stress on Seed Germination Physiological Indices in Asparagus Bean(Vigna unguiculata L.ssp.sesquipdalis Verdc.)

    Institute of Scientific and Technical Information of China (English)

    万茜; 刘伟; 陈禅友

    2007-01-01

    以3个豇豆品种为材料,采用完全随机设计,重复3次,设置低温15℃、常温25℃(对照)和高温35℃3个处理,进行种子萌发实验.确定供试种子批种子活力正常后,在萌发种子胚根长到1cm时,分胚根和子叶两个部位取样测定其可溶性蛋白质含量(TSP)、丙二醛(MDA)含量及超氧化物歧化酶(SOD)、过氧化氢酶(CAT)和过氧化物酶(POD)活性等生理指标.结果表明:温度胁迫使胚根中TSP含量均较常温显著或极显著降低,子叶中的TSP含量在低温处理下极显著高于对照,而在高温下与之相反;温度胁迫下,各豇豆品种胚根和子叶中MDA含量均较显著或极显著高于对照;SOD活性变化与之相反,但品种间有差异.胚根POD活性在低温下极显著高于对照,在高温下却显著或极显著低于对照,而子叶中与之相反.子叶中CAT活性在低温下上升,高温下下降,而胚根中均上升.因此,低温和高温都明显阻碍豇豆种子萌发,但生理基础上不完全一致,且胚根和子叶的反应有明显差别,其中比较一致的是种胚萌发时MDA含量升高和SOD活性下降,反应不一致的有TSP含量、POD活性及CAT活性变化.

  14. Effect of Simulated Acid Rain on Seed Germination and Seedling Growth in Vigna unguiculata ssp. sesquipedatis (L.) Verde%模拟酸雨对豇豆种子萌发及幼苗生长的影响

    Institute of Scientific and Technical Information of China (English)

    韩春梅

    2009-01-01

    研究了不同pH值(1.0,2.0,3.0,4.0,5.0和6.5)酸雨时豇豆种子萌发及幼苗生长的影响.研究结果表明,随着pH值的下降,豇豆的发芽率、发芽势、发芽指数、幼苗根长及下胚轴长均呈降低的趋势,均受到不同程度的抑制.当pH值降到最低1.0(酸度最强)时,所有豇豆种子全部发生霉烂现象.

  15. Künstlich gespaltene Inteine für die Protein-Semisynthese - Charakterisierung des Ssp DnaB Inteins und Modifikation des Ionenkanals OmpF mit Hilfe des Psp-GBD Pol Inteins

    OpenAIRE

    Brenzel, Steffen

    2010-01-01

    Gespaltene Inteine sind leistungsfähige Werkzeuge zur Knüpfung nativer Peptidbindungen zwischen Polypeptidsequenzen. Die von ihnen vermittelte Protein trans-Splei߬reaktion beginnt zunächst mit der Assoziation der Fragmente des gespaltenen Inteins, die Teile von zwei separaten Fusionsproteinen sind. Der gebildete spleißkompetente Inteinkomplex schnei¬det sich anschließend aus dem Vorläufer¬protein heraus und verbindet dab...

  16. PCR-SSP结合测序分析快速筛选HLA-A*0201亚等位基因%Rapid Screening of HLA-A * 0201 by PCR-SSP and Sequencing Analysis

    Institute of Scientific and Technical Information of China (English)

    郭薇; 张建琼; 沈传来; 孟凡岩; 谢维

    2003-01-01

    建立相对简单经济的检测HLA-A*0201等位基因的方法,以便于从特定人群中快速筛选HLA-A*0201阳性的个体,满足科研的需要.根据第十二届HLA国际联合会提供的标准操作规程和一对HLA-A位点特异性的引物,从外周血中提取基因组DNA,扩增HLA-A基因;再设计两对HLA-A2组特异性引物,采用套式PCR分别扩增HLA-A基因的5'端和3'端,如出现特异条带,则将后两对引物的PCR产物进行测序分析,对照HLA-A2组等位基因的第2和第3外显子序列图,确定是否为HLA-A*02011~02016的6个等位基因.结果:以HLA-A*0201阳性的T2细胞株为阳性对照进行检测,结果完全正确,并设立非HLA-A*0201的A2细胞株RML(HLA-A*0204)及Raii细胞株(非A2组)为对照,同时随机检测30份门诊病人血样,其中7份为HLA-A2阳性,经测序,2例为HLA-A*02011,1例为HLA-A*0211或0235,1例是HLA-A*0206或0221或0241或0244或0251或0254,1例是HLA-A*0205或0214,1例是HLA-A*0234或0235,1例是0250.本方法利用位点特异性引物进行2~3次PCR扩增,结合PCR产物测序便可相对简便经济地检测出HLA-A*0201的全部6个亚等位基因,为快速检测其他特定HLA等位基因提供了经济实用的模式.

  17. Technical and Management Information System (TMIS)

    Science.gov (United States)

    Rau, Timothy R.

    1987-01-01

    The TMIS goals developed to support the Space Station Program (SSP) mission requirements are outlined. The TMIS will provide common capabilities to all SSP centers and facilitate the flow of technical and management information throughout the program as well as SSP decision-making processes. A summary is presented of the various TMIS phases.

  18. Constituents of Essential Oils from Mentha longifolia Growing Wild in Greece.

    Science.gov (United States)

    Kokkini, S; Papageorgiou, V P

    1988-02-01

    The essential oils from 9 populations of MENTHA LONGIFOLIA (L.) L., ssp. LONGIFOLIA and ssp. PETIOLATA (Boiss.) Kokkini, growing wild in Greece, were investigated by means of GLC and GLC-MS. Piperitone oxide has been found as the main component in the essential oils of both subspecies while carvone only in some individuals of ssp. PETIOLATA (chemotype 2). PMID:17265207

  19. Aplikace stanovení sacharidu v mlékárenských výrobcích

    Czech Academy of Sciences Publication Activity Database

    Přibyla, Lubomír; Černý, V.

    Praha: VŠCHT, 2006, s. 13-15. ISBN N. [Mléko a sýry. Praha (CZ), 25.01.2006] R&D Projects: GA MZe QF4082 Institutional research plan: CEZ:AV0Z40310501 Keywords : Lactobacillus ssp. * Streptococcus ssp. * Propionibacterium ssp. Subject RIV: CB - Analytical Chemistry, Separation

  20. AcEST: BP919063 [AcEST

    Lifescience Database Archive (English)

    Full Text Available subunit IX OS=Heliosperma alpestre GN=psaJ PE=4 SV=1 Length = 46 Score = 50.8 bits (120), Expect = 3e-05 Identities...Query= BP919063|Adiantum capillus-veneris mRNA, clone: YMU001_000120_G09. (496 letters) Database: uniprot_trembl.fast...em I reaction center subunit IX OS=Physcomitrella patens GN=psaJ PE=3 SV=1 Len...AIWFGILAGLLIEINR 31 TrEMBL (release 39.9) Link to BlastX Result : TrEMBL tr_hit_id B7ZI94 Definition tr|B7ZI...action centre subunit IX OS=Heliosp... 51 3e-05 tr|Q69VC7|Q69VC7_ORYSJ Photosystem I subunit IX_chloroplast