WorldWideScience

Sample records for analyzing spatial patterns

  1. A bio-inspired spatial patterning circuit.

    Science.gov (United States)

    Chen, Kai-Yuan; Joe, Danial J; Shealy, James B; Land, Bruce R; Shen, Xiling

    2014-01-01

    Lateral Inhibition (LI) is a widely conserved patterning mechanism in biological systems across species. Distinct from better-known Turing patterns, LI depend on cell-cell contact rather than diffusion. We built an in silico genetic circuit model to analyze the dynamic properties of LI. The model revealed that LI amplifies differences between neighboring cells to push them into opposite states, hence forming stable 2-D patterns. Inspired by this insight, we designed and implemented an electronic circuit that recapitulates LI patterning dynamics. This biomimetic system serve as a physical model to elucidate the design principle of generating robust patterning through spatial feedback, regardless of the underlying devices being biological or electrical.

  2. Multifractal spatial patterns and diversity in an ecological succession.

    Directory of Open Access Journals (Sweden)

    Leonardo Ariel Saravia

    Full Text Available We analyzed the relationship between biodiversity and spatial biomass heterogeneity along an ecological succession developed in the laboratory. Periphyton (attached microalgae biomass spatial patterns at several successional stages were obtained using digital image analysis and at the same time we estimated the species composition and abundance. We show that the spatial pattern was self-similar and as the community developed in an homogeneous environment the pattern is self-organized. To characterize it we estimated the multifractal spectrum of generalized dimensions D(q. Using D(q we analyze the existence of cycles of heterogeneity during succession and the use of the information dimension D(1 as an index of successional stage. We did not find cycles but the values of D(1 showed an increasing trend as the succession developed and the biomass was higher. D(1 was also negatively correlated with Shannon's diversity. Several studies have found this relationship in different ecosystems but here we prove that the community self-organizes and generates its own spatial heterogeneity influencing diversity. If this is confirmed with more experimental and theoretical evidence D(1 could be used as an index, easily calculated from remote sensing data, to detect high or low diversity areas.

  3. Spatial capture-recapture: a promising method for analyzing data collected using artificial cover objects

    Science.gov (United States)

    Sutherland, Chris; Munoz, David; Miller, David A.W.; Grant, Evan H. Campbell

    2016-01-01

    Spatial capture–recapture (SCR) is a relatively recent development in ecological statistics that provides a spatial context for estimating abundance and space use patterns, and improves inference about absolute population density. SCR has been applied to individual encounter data collected noninvasively using methods such as camera traps, hair snares, and scat surveys. Despite the widespread use of capture-based surveys to monitor amphibians and reptiles, there are few applications of SCR in the herpetological literature. We demonstrate the utility of the application of SCR for studies of reptiles and amphibians by analyzing capture–recapture data from Red-Backed Salamanders, Plethodon cinereus, collected using artificial cover boards. Using SCR to analyze spatial encounter histories of marked individuals, we found evidence that density differed little among four sites within the same forest (on average, 1.59 salamanders/m2) and that salamander detection probability peaked in early October (Julian day 278) reflecting expected surface activity patterns of the species. The spatial scale of detectability, a measure of space use, indicates that the home range size for this population of Red-Backed Salamanders in autumn was 16.89 m2. Surveying reptiles and amphibians using artificial cover boards regularly generates spatial encounter history data of known individuals, which can readily be analyzed using SCR methods, providing estimates of absolute density and inference about the spatial scale of habitat use.

  4. A Theoretical Approach to Analyze the Parametric Influence on Spatial Patterns of Spodoptera frugiperda (J.E. Smith) (Lepidoptera: Noctuidae) Populations.

    Science.gov (United States)

    Garcia, A G; Godoy, W A C

    2017-06-01

    Studies of the influence of biological parameters on the spatial distribution of lepidopteran insects can provide useful information for managing agricultural pests, since the larvae of many species cause serious impacts on crops. Computational models to simulate the spatial dynamics of insect populations are increasingly used, because of their efficiency in representing insect movement. In this study, we used a cellular automata model to explore different patterns of population distribution of Spodoptera frugiperda (J.E. Smith) (Lepidoptera: Noctuidae), when the values of two biological parameters that are able to influence the spatial pattern (larval viability and adult longevity) are varied. We mapped the spatial patterns observed as the parameters varied. Additionally, by using population data for S. frugiperda obtained in different hosts under laboratory conditions, we were able to describe the expected spatial patterns occurring in corn, cotton, millet, and soybean crops based on the parameters varied. The results are discussed from the perspective of insect ecology and pest management. We concluded that computational approaches can be important tools to study the relationship between the biological parameters and spatial distributions of lepidopteran insect pests.

  5. Analysis of Spatial Voting Patterns: An Approach in Political Socialization

    Science.gov (United States)

    Klimasewski, Ted

    1973-01-01

    Passage of the 26th Amendment gave young adults the right to vote. This study attempts to further student understanding of the electoral process by presenting a method for analyzing spatial voting patterns. The spatial emphasis adds another dimension to the temporal and behavioral-structural approaches in studying the American electoral system.…

  6. Characteristics of Spatial Structural Patterns and Temporal Variability of Annual Precipitation in Ningxia

    Institute of Scientific and Technical Information of China (English)

    2011-01-01

    [Objective] The aim was to study the characteristics of the spatial structural patterns and temporal variability of annual precipitation in Ningxia.[Method] Using rotated empirical orthogonal function,the precipitation concentration index,wavelet analysis and Mann-Kendall rank statistic method,the characteristics of precipitation on the spatial-temporal variability and trend were analyzed by the monthly precipitation series in Ningxia during 1951-2008.[Result] In Ningxia,the spatial structural patterns of a...

  7. Behavioral states may be associated with distinct spatial patterns in electrocorticogram.

    Science.gov (United States)

    Panagiotides, Heracles; Freeman, Walter J; Holmes, Mark D; Pantazis, Dimitrios

    2011-03-01

    To determine if behavioral states are associated with unique spatial electrocorticographic (ECoG) patterns, we obtained recordings with a microgrid electrode array applied to the cortical surface of a human subject. The array was constructed with the intent of extracting maximal spatial information by optimizing interelectrode distances. A 34-year-old patient with intractable epilepsy underwent intracranial ECoG monitoring after standard methods failed to reveal localization of seizures. During the 8-day period of invasive recording, in addition to standard clinical electrodes a square 1 × 1 cm microgrid array with 64 electrodes (1.25 mm separation) was placed on the right inferior temporal gyrus. Careful review of video recordings identified four extended naturalistic behaviors: reading, conversing on the telephone, looking at photographs, and face-to-face interactions. ECoG activity recorded with the microgrid that corresponded to these behaviors was collected and ECoG spatial patterns were analyzed. During periods of ECoG selected for analysis, no electrographic seizures or epileptiform patterns were present. Moments of maximal spatial variance are shown to cluster by behavior. Comparisons between conditions using a permutation test reveal significantly different spatial patterns for each behavior. We conclude that ECoG recordings obtained on the cortical surface with optimal high spatial frequency resolution reveal distinct local spatial patterns that reflect different behavioral states, and we predict that similar patterns will be found in many if not most cortical areas on which a microgrid is placed.

  8. Spatial pattern and temporal trend of mortality due to tuberculosis

    Directory of Open Access Journals (Sweden)

    Ana Angélica Rêgo de Queiroz

    2018-05-01

    Full Text Available ABSTRACT Objectives: To describe the epidemiological profile of mortality due to tuberculosis (TB, to analyze the spatial pattern of these deaths and to investigate the temporal trend in mortality due to tuberculosis in Northeast Brazil. Methods: An ecological study based on secondary mortality data. Deaths due to TB were included in the study. Descriptive statistics were calculated and gross mortality rates were estimated and smoothed by the Local Empirical Bayesian Method. Prais-Winsten’s regression was used to analyze the temporal trend in the TB mortality coefficients. The Kernel density technique was used to analyze the spatial distribution of TB mortality. Results: Tuberculosis was implicated in 236 deaths. The burden of tuberculosis deaths was higher amongst males, single people and people of mixed ethnicity, and the mean age at death was 51 years. TB deaths were clustered in the East, West and North health districts, and the tuberculosis mortality coefficient remained stable throughout the study period. Conclusions: Analyses of the spatial pattern and temporal trend in mortality revealed that certain areas have higher TB mortality rates, and should therefore be prioritized in public health interventions targeting the disease.

  9. Modeling and analyzing stripe patterns in fish skin

    Science.gov (United States)

    Zheng, Yibo; Zhang, Lei; Wang, Yuan; Liang, Ping; Kang, Junjian

    2009-11-01

    The formation mechanism of stripe patterns in the skin of tropical fishes has been investigated by a coupled two variable reaction diffusion model. Two types of spatial inhomogeneities have been introduced into a homogenous system. Several Turing modes pumped by the Turing instability give rise to a simple stripe pattern. It is found that the Turing mechanism can only determine the wavelength of stripe pattern. The orientation of stripe pattern is determined by the spatial inhomogeneity. Our numerical results suggest that it may be the most possible mechanism for the forming process of fish skin patterns.

  10. Spatial Patterns of Development Drive Water Use

    Science.gov (United States)

    Sanchez, G. M.; Smith, J. W.; Terando, A.; Sun, G.; Meentemeyer, R. K.

    2018-03-01

    Water availability is becoming more uncertain as human populations grow, cities expand into rural regions and the climate changes. In this study, we examine the functional relationship between water use and the spatial patterns of developed land across the rapidly growing region of the southeastern United States. We quantified the spatial pattern of developed land within census tract boundaries, including multiple metrics of density and configuration. Through non-spatial and spatial regression approaches we examined relationships and spatial dependencies between the spatial pattern metrics, socio-economic and environmental variables and two water use variables: a) domestic water use, and b) total development-related water use (a combination of public supply, domestic self-supply and industrial self-supply). Metrics describing the spatial patterns of development had the highest measure of relative importance (accounting for 53% of model's explanatory power), explaining significantly more variance in water use compared to socio-economic or environmental variables commonly used to estimate water use. Integrating metrics characterizing the spatial pattern of development into water use models is likely to increase their utility and could facilitate water-efficient land use planning.

  11. Spatial patterns of development drive water use

    Science.gov (United States)

    Sanchez, G.M.; Smith, J.W.; Terando, Adam J.; Sun, G.; Meentemeyer, R.K.

    2018-01-01

    Water availability is becoming more uncertain as human populations grow, cities expand into rural regions and the climate changes. In this study, we examine the functional relationship between water use and the spatial patterns of developed land across the rapidly growing region of the southeastern United States. We quantified the spatial pattern of developed land within census tract boundaries, including multiple metrics of density and configuration. Through non‐spatial and spatial regression approaches we examined relationships and spatial dependencies between the spatial pattern metrics, socio‐economic and environmental variables and two water use variables: a) domestic water use, and b) total development‐related water use (a combination of public supply, domestic self‐supply and industrial self‐supply). Metrics describing the spatial patterns of development had the highest measure of relative importance (accounting for 53% of model's explanatory power), explaining significantly more variance in water use compared to socio‐economic or environmental variables commonly used to estimate water use. Integrating metrics characterizing the spatial pattern of development into water use models is likely to increase their utility and could facilitate water‐efficient land use planning.

  12. Spatial pattern of Amazonian timber species using cartesian and spatial coordinates method

    Directory of Open Access Journals (Sweden)

    Tiago Monteiro Condé

    2016-06-01

    Full Text Available Geographic information system (GIS applied to forest analysis permit the recognition and analysis of spatial patterns of species in two and three dimensional. The aim of this study to demonstrate the efficiency of cartesian and spatial coordinates method (MCCE, method of correcting UTM coordinates of trees location in accordance with the location of field or Cartesian (X ,Y, combined with natural neighbor index (ANND in recognition and analysis of spatial distribution patterns of four commercial timber species in forest management in Caracaraí, Roraima State, Brazil. Simulations were performed on 9 ha, divided into 100 plots of 100 m2 each. Collected data were DBH > 10 cm, commercial and total heights, cartesian coordinates (X,Y and spatial coordinates (UTM. Random spatial patterns were observed in Eschweilera bracteosa and Manilkara huberi. The dispersed and rare spatial patterns were observed in Dinizia excelsa and Cedrelinga cateniformis. MCCE proved to be an efficient method in the recognition and analysis of spatial patterns of native species from Amazon rain forest, as forest planning becomes easier by 2D and 3D simulations.

  13. Spatial Patterns of Inshore Marine Soundscapes.

    Science.gov (United States)

    McWilliam, Jamie

    2016-01-01

    Passive acoustic monitoring was employed to investigate spatial patterns of soundscapes within a marine reserve. High energy level broadband snaps dominated nearly all habitat soundscapes. Snaps, the principal acoustic feature of soundscapes, were primarily responsible for the observed spatial patterns, and soundscapes appeared to retain a level of compositional and configurational stability. In the presence of high-level broadband snaps, soundscape composition was more influenced by geographic location than habitat type. Future research should focus on investigating the spatial patterns of soundscapes across a wider range of coastal and offshore seascapes containing a variety of distinct ecosystems and habitats.

  14. Application of a clustering-remote sensing method in analyzing security patterns

    Science.gov (United States)

    López-Caloca, Alejandra; Martínez-Viveros, Elvia; Chapela-Castañares, José Ignacio

    2009-04-01

    In Mexican academic and government circles, research on criminal spatial behavior has been neglected. Only recently has there been an interest in criminal data geo-reference. However, more sophisticated spatial analyses models are needed to disclose spatial patterns of crime and pinpoint their changes overtime. The main use of these models lies in supporting policy making and strategic intelligence. In this paper we present a model for finding patterns associated with crime. It is based on a fuzzy logic algorithm which finds the best fit within cluster numbers and shapes of groupings. We describe the methodology for building the model and its validation. The model was applied to annual data for types of felonies from 2005 to 2006 in the Mexican city of Hermosillo. The results are visualized as a standard deviational ellipse computed for the points identified to be a "cluster". These areas indicate a high to low demand for public security, and they were cross-related to urban structure analyzed by SPOT images and statistical data such as population, poverty levels, urbanization, and available services. The fusion of the model results with other geospatial data allows detecting obstacles and opportunities for crime commission in specific high risk zones and guide police activities and criminal investigations.

  15. Uncovering patterns of inter-urban trip and spatial interaction from social media check-in data.

    Directory of Open Access Journals (Sweden)

    Yu Liu

    Full Text Available The article revisits spatial interaction and distance decay from the perspective of human mobility patterns and spatially-embedded networks based on an empirical data set. We extract nationwide inter-urban movements in China from a check-in data set that covers half a million individuals within 370 cities to analyze the underlying patterns of trips and spatial interactions. By fitting the gravity model, we find that the observed spatial interactions are governed by a power law distance decay effect. The obtained gravity model also closely reproduces the exponential trip displacement distribution. The movement of an individual, however, may not obey the same distance decay effect, leading to an ecological fallacy. We also construct a spatial network where the edge weights denote the interaction strengths. The communities detected from the network are spatially cohesive and roughly consistent with province boundaries. We attribute this pattern to different distance decay parameters between intra-province and inter-province trips.

  16. Uncovering patterns of inter-urban trip and spatial interaction from social media check-in data.

    Science.gov (United States)

    Liu, Yu; Sui, Zhengwei; Kang, Chaogui; Gao, Yong

    2014-01-01

    The article revisits spatial interaction and distance decay from the perspective of human mobility patterns and spatially-embedded networks based on an empirical data set. We extract nationwide inter-urban movements in China from a check-in data set that covers half a million individuals within 370 cities to analyze the underlying patterns of trips and spatial interactions. By fitting the gravity model, we find that the observed spatial interactions are governed by a power law distance decay effect. The obtained gravity model also closely reproduces the exponential trip displacement distribution. The movement of an individual, however, may not obey the same distance decay effect, leading to an ecological fallacy. We also construct a spatial network where the edge weights denote the interaction strengths. The communities detected from the network are spatially cohesive and roughly consistent with province boundaries. We attribute this pattern to different distance decay parameters between intra-province and inter-province trips.

  17. Uncovering Patterns of Inter-Urban Trip and Spatial Interaction from Social Media Check-In Data

    Science.gov (United States)

    Liu, Yu; Sui, Zhengwei; Kang, Chaogui; Gao, Yong

    2014-01-01

    The article revisits spatial interaction and distance decay from the perspective of human mobility patterns and spatially-embedded networks based on an empirical data set. We extract nationwide inter-urban movements in China from a check-in data set that covers half a million individuals within 370 cities to analyze the underlying patterns of trips and spatial interactions. By fitting the gravity model, we find that the observed spatial interactions are governed by a power law distance decay effect. The obtained gravity model also closely reproduces the exponential trip displacement distribution. The movement of an individual, however, may not obey the same distance decay effect, leading to an ecological fallacy. We also construct a spatial network where the edge weights denote the interaction strengths. The communities detected from the network are spatially cohesive and roughly consistent with province boundaries. We attribute this pattern to different distance decay parameters between intra-province and inter-province trips. PMID:24465849

  18. Mapping spatial patterns with morphological image processing

    Science.gov (United States)

    Peter Vogt; Kurt H. Riitters; Christine Estreguil; Jacek Kozak; Timothy G. Wade; James D. Wickham

    2006-01-01

    We use morphological image processing for classifying spatial patterns at the pixel level on binary land-cover maps. Land-cover pattern is classified as 'perforated,' 'edge,' 'patch,' and 'core' with higher spatial precision and thematic accuracy compared to a previous approach based on image convolution, while retaining the...

  19. OpenMSI Arrayed Analysis Toolkit: Analyzing Spatially Defined Samples Using Mass Spectrometry Imaging

    Energy Technology Data Exchange (ETDEWEB)

    de Raad, Markus [Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States); de Rond, Tristan [Univ. of California, Berkeley, CA (United States); Rübel, Oliver [Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States); Keasling, Jay D. [Univ. of California, Berkeley, CA (United States); Joint BioEnergy Inst. (JBEI), Emeryville, CA (United States); Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States); Technical Univ. of Denmark, Lyngby (Denmark); Northen, Trent R. [Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States); USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States); Bowen, Benjamin P. [Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States); USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States)

    2017-05-03

    Mass spectrometry imaging (MSI) has primarily been applied in localizing biomolecules within biological matrices. Although well-suited, the application of MSI for comparing thousands of spatially defined spotted samples has been limited. One reason for this is a lack of suitable and accessible data processing tools for the analysis of large arrayed MSI sample sets. In this paper, the OpenMSI Arrayed Analysis Toolkit (OMAAT) is a software package that addresses the challenges of analyzing spatially defined samples in MSI data sets. OMAAT is written in Python and is integrated with OpenMSI (http://openmsi.nersc.gov), a platform for storing, sharing, and analyzing MSI data. By using a web-based python notebook (Jupyter), OMAAT is accessible to anyone without programming experience yet allows experienced users to leverage all features. OMAAT was evaluated by analyzing an MSI data set of a high-throughput glycoside hydrolase activity screen comprising 384 samples arrayed onto a NIMS surface at a 450 μm spacing, decreasing analysis time >100-fold while maintaining robust spot-finding. The utility of OMAAT was demonstrated for screening metabolic activities of different sized soil particles, including hydrolysis of sugars, revealing a pattern of size dependent activities. Finally, these results introduce OMAAT as an effective toolkit for analyzing spatially defined samples in MSI. OMAAT runs on all major operating systems, and the source code can be obtained from the following GitHub repository: https://github.com/biorack/omaat.

  20. Spatial and spatiotemporal pattern analysis of coconut lethal yellowing in Mozambique.

    Science.gov (United States)

    Bonnot, F; de Franqueville, H; Lourenço, E

    2010-04-01

    Coconut lethal yellowing (LY) is caused by a phytoplasma and is a major threat for coconut production throughout its growing area. Incidence of LY was monitored visually on every coconut tree in six fields in Mozambique for 34 months. Disease progress curves were plotted and average monthly disease incidence was estimated. Spatial patterns of disease incidence were analyzed at six assessment times. Aggregation was tested by the coefficient of spatial autocorrelation of the beta-binomial distribution of diseased trees in quadrats. The binary power law was used as an assessment of overdispersion across the six fields. Spatial autocorrelation between symptomatic trees was measured by the BB join count statistic based on the number of pairs of diseased trees separated by a specific distance and orientation, and tested using permutation methods. Aggregation of symptomatic trees was detected in every field in both cumulative and new cases. Spatiotemporal patterns were analyzed with two methods. The proximity of symptomatic trees at two assessment times was investigated using the spatiotemporal BB join count statistic based on the number of pairs of trees separated by a specific distance and orientation and exhibiting the first symptoms of LY at the two times. The semivariogram of times of appearance of LY was calculated to characterize how the lag between times of appearance of LY was related to the distance between symptomatic trees. Both statistics were tested using permutation methods. A tendency for new cases to appear in the proximity of previously diseased trees and a spatially structured pattern of times of appearance of LY within clusters of diseased trees were detected, suggesting secondary spread of the disease.

  1. Multiple Spatial Coherence Resonances and Spatial Patterns in a Noise-Driven Heterogeneous Neuronal Network

    International Nuclear Information System (INIS)

    Li Yu-Ye; Ding Xue-Li

    2014-01-01

    Heterogeneity of the neurons and noise are inevitable in the real neuronal network. In this paper, Gaussian white noise induced spatial patterns including spiral waves and multiple spatial coherence resonances are studied in a network composed of Morris—Lecar neurons with heterogeneity characterized by parameter diversity. The relationship between the resonances and the transitions between ordered spiral waves and disordered spatial patterns are achieved. When parameter diversity is introduced, the maxima of multiple resonances increases first, and then decreases as diversity strength increases, which implies that the coherence degrees induced by noise are enhanced at an intermediate diversity strength. The synchronization degree of spatial patterns including ordered spiral waves and disordered patterns is identified to be a very low level. The results suggest that the nervous system can profit from both heterogeneity and noise, and the multiple spatial coherence resonances are achieved via the emergency of spiral waves instead of synchronization patterns. (interdisciplinary physics and related areas of science and technology)

  2. Multiple Spatial Coherence Resonances and Spatial Patterns in a Noise-Driven Heterogeneous Neuronal Network

    Science.gov (United States)

    Li, Yu-Ye; Ding, Xue-Li

    2014-12-01

    Heterogeneity of the neurons and noise are inevitable in the real neuronal network. In this paper, Gaussian white noise induced spatial patterns including spiral waves and multiple spatial coherence resonances are studied in a network composed of Morris—Lecar neurons with heterogeneity characterized by parameter diversity. The relationship between the resonances and the transitions between ordered spiral waves and disordered spatial patterns are achieved. When parameter diversity is introduced, the maxima of multiple resonances increases first, and then decreases as diversity strength increases, which implies that the coherence degrees induced by noise are enhanced at an intermediate diversity strength. The synchronization degree of spatial patterns including ordered spiral waves and disordered patterns is identified to be a very low level. The results suggest that the nervous system can profit from both heterogeneity and noise, and the multiple spatial coherence resonances are achieved via the emergency of spiral waves instead of synchronization patterns.

  3. Inputs and spatial distribution patterns of Cr in Jiaozhou Bay

    Science.gov (United States)

    Yang, Dongfang; Miao, Zhenqing; Huang, Xinmin; Wei, Linzhen; Feng, Ming

    2018-03-01

    Cr pollution in marine bays has been one of the critical environmental issues, and understanding the input and spatial distribution patterns is essential to pollution control. In according to the source strengths of the major pollution sources, the input patterns of pollutants to marine bay include slight, moderate and heavy, and the spatial distribution are corresponding to three block models respectively. This paper analyzed input patterns and distributions of Cr in Jiaozhou Bay, eastern China based on investigation on Cr in surface waters during 1979-1983. Results showed that the input strengths of Cr in Jiaozhou Bay could be classified as moderate input and slight input, and the input strengths were 32.32-112.30 μg L-1 and 4.17-19.76 μg L-1, respectively. The input patterns of Cr included two patterns of moderate input and slight input, and the horizontal distributions could be defined by means of Block Model 2 and Block Model 3, respectively. In case of moderate input pattern via overland runoff, Cr contents were decreasing from the estuaries to the bay mouth, and the distribution pattern was parallel. In case of moderate input pattern via marine current, Cr contents were decreasing from the bay mouth to the bay, and the distribution pattern was parallel to circular. The Block Models were able to reveal the transferring process of various pollutants, and were helpful to understand the distributions of pollutants in marine bay.

  4. Monitoring, analyzing and simulating of spatial-temporal changes of landscape pattern over mining area

    Science.gov (United States)

    Liu, Pei; Han, Ruimei; Wang, Shuangting

    2014-11-01

    According to the merits of remotely sensed data in depicting regional land cover and Land changes, multi- objective information processing is employed to remote sensing images to analyze and simulate land cover in mining areas. In this paper, multi-temporal remotely sensed data were selected to monitor the pattern, distri- bution and trend of LUCC and predict its impacts on ecological environment and human settlement in mining area. The monitor, analysis and simulation of LUCC in this coal mining areas are divided into five steps. The are information integration of optical and SAR data, LULC types extraction with SVM classifier, LULC trends simulation with CA Markov model, landscape temporal changes monitoring and analysis with confusion matrixes and landscape indices. The results demonstrate that the improved data fusion algorithm could make full use of information extracted from optical and SAR data; SVM classifier has an efficient and stable ability to obtain land cover maps, which could provide a good basis for both land cover change analysis and trend simulation; CA Markov model is able to predict LULC trends with good performance, and it is an effective way to integrate remotely sensed data with spatial-temporal model for analysis of land use / cover change and corresponding environmental impacts in mining area. Confusion matrixes are combined with landscape indices to evaluation and analysis show that, there was a sustained downward trend in agricultural land and bare land, but a continues growth trend tendency in water body, forest and other lands, and building area showing a wave like change, first increased and then decreased; mining landscape has undergone a from small to large and large to small process of fragmentation, agricultural land is the strongest influenced landscape type in this area, and human activities are the primary cause, so the problem should be pay more attentions by government and other organizations.

  5. Spatial patterns of development drive water use

    Science.gov (United States)

    G. M. Sanchez; J. W. Smith; A. Terando; G. Sun; R. K. Meentemeyer

    2018-01-01

    Water availability is becoming more uncertain as human populations grow, cities expand into rural regions and the climate changes. In this study, we examine the functional relationship between water use and the spatial patterns of developed land across the rapidly growing region of the southeastern United States. We quantified the spatial pattern of developed land...

  6. Spatial Pattern, Transportation and Air Quality Nexus: The Case of Iskandar Malaysia

    Directory of Open Access Journals (Sweden)

    Azalia Mohd Yusop

    2016-09-01

    Full Text Available Spatial pattern, transportation, and air quality are three development entities which significantly affecting one another. This nexus exhibits the urbanization imprint accouter transportation generating air pollution as a reflection of spatial distribution. The integration among them is a vital part of development as it affects the societal living environment. It provides unfavorable air quality and directly cause health problems. The developing region of Iskandar Malaysia exhibits huge spatial distribution transformation accompanied by large percentage of urbanization rate, but seems less integration of land use and transportation planning which causes the exaggeration of air pollution. We carry out the research on the nexus of spatial distribution, transportation and air quality in Iskandar Malaysia by analyzing and evaluating the interconnectivity of these three entities. The spatial analysis and evaluation on the land use development pattern and spatial policy shows that the Iskandar development region are growing in the polycentric manners, where the spatial development policy drives the distributional growth of new sub-centers. We undertook a household-based travel survey that reveals the poly-centricity reflected by the de-concentration of workplaces which shifted from the single point towards multiple centers. On the other hand, this phenomenon has created a distributional traffic pattern amid the high dependency on the private vehicles of the citizens in Iskandar Malaysia. With a predominantly fossil fuel consuming vehicles, this has generated air pollution. Based on the traffic survey and the dependency of the citizens on private cars for their daily mobility, the concentration of air pollution is seemingly at risk. This research reflects that Iskandar Malaysia development region currently undergoes towards polycentric development with some new urban centers. We found that land use and transportation planning policies require serious

  7. West African spatial patterns of economic activities

    DEFF Research Database (Denmark)

    Walther, Olivier; Howard, Allen; Retaillé, Denis

    2015-01-01

    Over the last 30 years, two different bodies of literature developed by both US historians and francophone geographers have moved toward similar conclusions regarding West African economic spatial patterns. Despite their different backgrounds, both the ‘spatial factor’ approach promoted by histor......Over the last 30 years, two different bodies of literature developed by both US historians and francophone geographers have moved toward similar conclusions regarding West African economic spatial patterns. Despite their different backgrounds, both the ‘spatial factor’ approach promoted...... by historians and the ‘mobile space’ approach developed by geographers view exchange centres as nodes of transnational trade networks and places in production territories, and perceive spatial dynamics as highly dependent on shifts of trade flows and production activities. The objective of this article...

  8. Temporal symmetry of individual filaments in different spatial symmetry filaments pattern in a dielectric barrier discharge

    International Nuclear Information System (INIS)

    Dong, L. F.; Xiao, H.; Fan, W. L.; Yin, Z. Q.; Zhao, H. T.

    2010-01-01

    The temporal behavior of individual filament in different spatial symmetry filaments patterns in dielectric barrier discharge is investigated by using an optical method. A series of return maps of the discharge moments of individual filaments is given. It is found that the temporal symmetry of individual filament changes with the change of the spatial symmetry of filaments pattern as the applied voltage increases. The role of wall charges for this phenomenon is analyzed.

  9. Spatial patterns in accretion on barrier-island salt marshes

    NARCIS (Netherlands)

    Groot, de A.V.; Veeneklaas, R.M.; Kuijper, D.P.J.; Bakker, J.P.

    2011-01-01

    On minerogenic barrier-island salt marshes, sedimentation is spatially heterogeneous. Although the main forcing factors for sedimentation are known, much less is known about the characteristic sizes of this spatial patterning. Such patterning gives information on the spatial component of salt-marsh

  10. Multi-spatial analysis of aeolian dune-field patterns

    Science.gov (United States)

    Ewing, Ryan C.; McDonald, George D.; Hayes, Alex G.

    2015-07-01

    Aeolian dune-fields are composed of different spatial scales of bedform patterns that respond to changes in environmental boundary conditions over a wide range of time scales. This study examines how variations in spatial scales of dune and ripple patterns found within dune fields are used in environmental reconstructions on Earth, Mars and Titan. Within a single bedform type, different spatial scales of bedforms emerge as a pattern evolves from an initial state into a well-organized pattern, such as with the transition from protodunes to dunes. Additionally, different types of bedforms, such as ripples, coarse-grained ripples and dunes, coexist at different spatial scales within a dune-field. Analysis of dune-field patterns at the intersection of different scales and types of bedforms at different stages of development provides a more comprehensive record of sediment supply and wind regime than analysis of a single scale and type of bedform. Interpretations of environmental conditions from any scale of bedform, however, are limited to environmental signals associated with the response time of that bedform. Large-scale dune-field patterns integrate signals over long-term climate cycles and reveal little about short-term variations in wind or sediment supply. Wind ripples respond instantly to changing conditions, but reveal little about longer-term variations in wind or sediment supply. Recognizing the response time scales across different spatial scales of bedforms maximizes environmental interpretations from dune-field patterns.

  11. Spatial pattern evaluation of a calibrated national hydrological model - a remote-sensing-based diagnostic approach

    Science.gov (United States)

    Mendiguren, Gorka; Koch, Julian; Stisen, Simon

    2017-11-01

    Distributed hydrological models are traditionally evaluated against discharge stations, emphasizing the temporal and neglecting the spatial component of a model. The present study widens the traditional paradigm by highlighting spatial patterns of evapotranspiration (ET), a key variable at the land-atmosphere interface, obtained from two different approaches at the national scale of Denmark. The first approach is based on a national water resources model (DK-model), using the MIKE-SHE model code, and the second approach utilizes a two-source energy balance model (TSEB) driven mainly by satellite remote sensing data. Ideally, the hydrological model simulation and remote-sensing-based approach should present similar spatial patterns and driving mechanisms of ET. However, the spatial comparison showed that the differences are significant and indicate insufficient spatial pattern performance of the hydrological model.The differences in spatial patterns can partly be explained by the fact that the hydrological model is configured to run in six domains that are calibrated independently from each other, as it is often the case for large-scale multi-basin calibrations. Furthermore, the model incorporates predefined temporal dynamics of leaf area index (LAI), root depth (RD) and crop coefficient (Kc) for each land cover type. This zonal approach of model parameterization ignores the spatiotemporal complexity of the natural system. To overcome this limitation, this study features a modified version of the DK-model in which LAI, RD and Kc are empirically derived using remote sensing data and detailed soil property maps in order to generate a higher degree of spatiotemporal variability and spatial consistency between the six domains. The effects of these changes are analyzed by using empirical orthogonal function (EOF) analysis to evaluate spatial patterns. The EOF analysis shows that including remote-sensing-derived LAI, RD and Kc in the distributed hydrological model adds

  12. Suitable Methods in Spatial Pattern Analysis of Heterogeneous Wild Pistachio (Pistacia atlantica Desf. Woodlands in Zagros, Iran

    Directory of Open Access Journals (Sweden)

    Y. Erfanifard

    2014-12-01

    Full Text Available Spatial pattern of trees in forests reveals how trees interact with each other and their environment. Spatial structure of trees in forest ecosystems is affected by environmental heterogeneity that leads to their heterogeneous distribution. This study was aimed to investigate the appropriate methods to analyze spatial pattern of heterogeneous wild pistachio woodlands in Zagros, Iran. A 40-ha pure stand of wild pistachio trees (Pistacia atlantica Desf. was selected in Wild Pistachio Research Forest in Fars Province for this purpose. The Kolmogrov-Smirnov test of goodness-of-fit of inhomogeneous Poisson point process showed that the distribution of wild pistachio trees was significantly heterogeneous (α=0.05. Inhomogeneous Ripley's K-, L-, and G-functions were applied beside their homogeneous forms. Inhomogeneous Ripley's K- and L-functions showed that wild pistachio trees were primarily clumped and dispersedly distributed thereafter, while g(r not only showed these results but also well expressed the detailed changes in spatial scale. The results of inappropriate homogeneous functions in the study area showed that all three functions expressed the primary clumping of the trees more than it was and their dispersed pattern as clumped. In general, it was concluded that inhomogeneous functions should be applied to analyze the spatial pattern of heterogeneous wild pistachio trees in the study area and it is recommended to develop g(r applications due to its more detailed information

  13. Integrating spatial and numerical structure in mathematical patterning

    Science.gov (United States)

    Ni’mah, K.; Purwanto; Irawan, E. B.; Hidayanto, E.

    2018-03-01

    This paper reports a study monitoring the integrating spatial and numerical structure in mathematical patterning skills of 30 students grade 7th of junior high school. The purpose of this research is to clarify the processes by which learners construct new knowledge in mathematical patterning. Findings indicate that: (1) students are unable to organize the structure of spatial and numerical, (2) students were only able to organize the spatial structure, but the numerical structure is still incorrect, (3) students were only able to organize numerical structure, but its spatial structure is still incorrect, (4) students were able to organize both of the spatial and numerical structure.

  14. Development of Spatial Distribution Patterns by Biofilm Cells

    DEFF Research Database (Denmark)

    Haagensen, Janus Anders Juul; Hansen, Susse Kirkelund; Bak Christensen, Bjarke

    2015-01-01

    -pattern by Acinetobacter sp. C6. Ecological spatial pattern analyses revealed that the microcolonies were not entirely randomly distributed, and instead arranged in a uniform pattern. Detailed time-lapse confocal microscopy at the single cell level demonstrated that the spatial pattern was the result of an intriguing self......-organization: Small multicellular clusters moved along the surface to fuse with one another to form microcolonies. This active distribution capability was dependent on environmental factors (carbon source, oxygen) and historical contingency (formation of phenotypic variants). The findings of this study are discussed...

  15. Mining the Relationship between Spatial Mobility Patterns and POIs

    Directory of Open Access Journals (Sweden)

    Liping Huang

    2018-01-01

    Full Text Available Passengers move between urban places for diverse interests and drive the metropolitan regions as the aggregation of urban places to group into network communities. This paper aims to examine the relationship between the spatial patterns (represented by the network communities of mobility flows and places of interest (POIs. Furtherly, it intends to identify the categories of POIs that play the most significant role in shaping the spatial patterns of mobility flows. To achieve these purposes, we partition the study area into disjoint regions and construct the network with each partitioned region as a node and connection between them as links weighted by the mobility flows. The community detection algorithm is implemented on the network to discover spatial mobility patterns, and the multiclass classification based on the logistic regression method is adopted to classify spatial communities featured by POIs. Taking the taxi systems of Shanghai and Beijing as examples, we detect spatial communities based on the movement strengths among regions. Then we investigate their correlations with POIs. It finds that communities’ modularity correlates linearly with POIs; particularly governments, hotels, and the traffic facilities are of the most significance for generating the mobility patterns. This study can provide valuable insight into understanding the spatial mobility patterns from the perspective of POIs.

  16. Mining Co-Location Patterns with Clustering Items from Spatial Data Sets

    Science.gov (United States)

    Zhou, G.; Li, Q.; Deng, G.; Yue, T.; Zhou, X.

    2018-05-01

    The explosive growth of spatial data and widespread use of spatial databases emphasize the need for the spatial data mining. Co-location patterns discovery is an important branch in spatial data mining. Spatial co-locations represent the subsets of features which are frequently located together in geographic space. However, the appearance of a spatial feature C is often not determined by a single spatial feature A or B but by the two spatial features A and B, that is to say where A and B appear together, C often appears. We note that this co-location pattern is different from the traditional co-location pattern. Thus, this paper presents a new concept called clustering terms, and this co-location pattern is called co-location patterns with clustering items. And the traditional algorithm cannot mine this co-location pattern, so we introduce the related concept in detail and propose a novel algorithm. This algorithm is extended by join-based approach proposed by Huang. Finally, we evaluate the performance of this algorithm.

  17. Spatial patterns and processes for shifting cultivation landscape in Garo Hills, India.

    Science.gov (United States)

    Ashish Kumar; Bruce G. Marcot; P.S. Roy

    2006-01-01

    We analyzed a few spatial patterns and processes of a shifting cultivation landscape in the Garo Hills of Meghalaya state in North East India, where about 85% of land belongs to native community. The landscape comprised 2459 km2 of land with forest cover and shifting cultivation patches over 69% and 7% area of landscape, respectively. The mean...

  18. The spatial patterns of directional phenotypic selection

    KAUST Repository

    Siepielski, Adam M.; Gotanda, Kiyoko M.; Morrissey, Michael B.; Diamond, Sarah E.; DiBattista, Joseph; Carlson, Stephanie Marie

    2013-01-01

    the spatial patterns of selection, namely the extent of variation among populations in the strength and direction of selection. Here, we analyse a data set of spatially replicated studies of directional phenotypic selection from natural populations. The data

  19. Mapping spatial patterns of people's risk perception of landslides

    Science.gov (United States)

    Kofler, Christian; Pedoth, Lydia; Elzbieta Stawinoga, Agnieszka; Schneiderbauer, Stefan

    2016-04-01

    The resilience of communities against natural hazards is largely influenced by how the individuals perceive risk. A good understanding of people's risk perception, awareness and hazard knowledge is crucial for developing and improving risk management and communication strategies between authorities and the affected population. A lot of research has been done in investigating the social aspects of risks to natural hazards by means of interviews or questionnaires. However, there is still a lack of research in the investigation of the influence of the spatial distance to a hazard event on peoples risk perception. While the spatial dimension of a natural hazard event is always assessed in works with a natural science approach, it is often neglected in works on social aspects of natural hazards. In the present study, we aimed to overcome these gaps by combining methods from different disciplines and assessing and mapping the spatial pattern of risk perception through multivariate statistical approaches based on empirical data from questionnaires. We will present results from a case study carried out in Badia, located in the Province of South Tyrol- Italy, where in December 2012 a landslide destroyed four residential buildings and led to the evacuation of 36 people. By means of questionnaires distributed to all adults living in the case study area we assessed people's risk perception and asked respondents to allocate their place of residence on a map of the case study area subdivided in 7 zones. Based on the data of the questionnaire results we developed a risk perception factor in order to express various assessed aspects linked to risk perception with one metric. We analyzed and mapped this factor according to the different zones reflecting the spatial distance to the event. Furthermore, a cluster analysis identified various risk behavior profiles within the population. We also investigated the spatial patterns of these risk profiles. We revealed that the residential

  20. Analyzing and Predicting Micro-Location Patterns of Software Firms

    Directory of Open Access Journals (Sweden)

    Jan Kinne

    2017-12-01

    Full Text Available While the effects of non-geographic aggregation on statistical inference are well studied in economics, research on the effects of geographic aggregation on regression analysis is rather scarce. This knowledge gap, together with the use of aggregated spatial units in previous firm location studies, results in a lack of understanding of firm location determinants at the microgeographic level. Suitable data for microgeographic location analysis has become available only recently through the emergence of Volunteered Geographic Information (VGI, especially the OpenStreetMap (OSM project, and the increasing availability of official (open geodata. In this paper, we use a comprehensive dataset of three million street-level geocoded firm observations to explore the location pattern of software firms in an Exploratory Spatial Data Analysis (ESDA. Based on the ESDA results, we develop a software firm location prediction model using Poisson regression and OSM data. Our findings offer novel insights into the mode of operation of the Modifiable Areal Unit Problem (MAUP in the context of a microgeographic location analysis: We find that non-aggregated data can be used to detect information on location determinants, which are superimposed when aggregated spatial units are analyzed, and that some findings of previous firm location studies are not robust at the microgeographic level. However, we also conclude that the lack of high-resolution geodata on socio-economic population characteristics causes systematic prediction errors, especially in cities with diverse and segregated populations.

  1. Quantifying Forest Spatial Pattern Trends at Multiple Extents: An Approach to Detect Significant Changes at Different Scales

    Directory of Open Access Journals (Sweden)

    Ludovico Frate

    2014-09-01

    Full Text Available We propose a procedure to detect significant changes in forest spatial patterns and relevant scales. Our approach consists of four sequential steps. First, based on a series of multi-temporal forest maps, a set of geographic windows of increasing extents are extracted. Second, for each extent and date, specific stochastic simulations that replicate real-world spatial pattern characteristics are run. Third, by computing pattern metrics on both simulated and real maps, their empirical distributions and confidence intervals are derived. Finally, multi-temporal scalograms are built for each metric. Based on cover maps (1954, 2011 with a resolution of 10 m we analyze forest pattern changes in a central Apennines (Italy reserve at multiple spatial extents (128, 256 and 512 pixels. We identify three types of multi-temporal scalograms, depending on pattern metric behaviors, describing different dynamics of natural reforestation process. The statistical distribution and variability of pattern metrics at multiple extents offers a new and powerful tool to detect forest variations over time. Similar procedures can (i help to identify significant changes in spatial patterns and provide the bases to relate them to landscape processes; (ii minimize the bias when comparing pattern metrics at a single extent and (iii be extended to other landscapes and scales.

  2. Mapping spatial patterns of denitrifiers at large scales (Invited)

    Science.gov (United States)

    Philippot, L.; Ramette, A.; Saby, N.; Bru, D.; Dequiedt, S.; Ranjard, L.; Jolivet, C.; Arrouays, D.

    2010-12-01

    Little information is available regarding the landscape-scale distribution of microbial communities and its environmental determinants. Here we combined molecular approaches and geostatistical modeling to explore spatial patterns of the denitrifying community at large scales. The distribution of denitrifrying community was investigated over 107 sites in Burgundy, a 31 500 km2 region of France, using a 16 X 16 km sampling grid. At each sampling site, the abundances of denitrifiers and 42 soil physico-chemical properties were measured. The relative contributions of land use, spatial distance, climatic conditions, time and soil physico-chemical properties to the denitrifier spatial distribution were analyzed by canonical variation partitioning. Our results indicate that 43% to 85% of the spatial variation in community abundances could be explained by the measured environmental parameters, with soil chemical properties (mostly pH) being the main driver. We found spatial autocorrelation up to 739 km and used geostatistical modelling to generate predictive maps of the distribution of denitrifiers at the landscape scale. Studying the distribution of the denitrifiers at large scale can help closing the artificial gap between the investigation of microbial processes and microbial community ecology, therefore facilitating our understanding of the relationships between the ecology of denitrifiers and N-fluxes by denitrification.

  3. Effect of Conservation on Spatial Pattern of Dominant Trees in Beech (Fagus Orientalis Lipsky Communities, (Case Study: Masal, Guilan

    Directory of Open Access Journals (Sweden)

    S. S. Ebrahimi

    2013-12-01

    Full Text Available Spatial patterns are suitable tools for optimal management in many forested areas. In this research, the effect of conservation on spatial pattern of dominant trees has been studied. To achieving this purpose, protected and non- protected forests were selected in Masal region of Guilan province as the study area. Sampling methods including fixed- area plots and distance methods, such as T- square and compound sampling were used 25 circle sample plots, each with an area 1000 m2and 25 sampling points were taken. Then, tree species in plot samples and the distance of interest were identified and measured. Dispersion indices such as Green, Morisata, standardized Morisata, Hopkins, Eberhart, Johnson and Zimmer, Hines and C were used to analyze the spatial pattern in the areas. All indices related to plot samples indicated the clumped pattern for dominant species in protected and non- protected areas. The results of the distance indices have indicated that destruction changes the spatial pattern of dominant species and these species had different pattern in these areas. Among the distance indices, C and Hines indices revealed differences and they were suitable to describe the spatial pattern of both areas.

  4. Spatial analysis of weed patterns

    NARCIS (Netherlands)

    Heijting, S.

    2007-01-01

    Keywords: Spatial analysis, weed patterns, Mead’s test, space-time correlograms, 2-D correlograms, dispersal, Generalized Linear Models, heterogeneity, soil, Taylor’s power law. Weeds in agriculture occur in patches. This thesis is a contribution to the characterization of this patchiness, to its

  5. ANALYSIS OF SPATIAL PATTERN AND INFLUENCING FACTORS OF E-COMMERCE

    OpenAIRE

    Y. Zhang; J. Chen; S. Zhang

    2017-01-01

    This paper aims to study the relationship between e-commerce development and geographical characteristics using data of e-commerce, economy, Internet, express delivery and population from 2011 to 2015. Moran’s I model and GWR model are applied to analyze the spatial pattern of E-commerce and its influencing factors. There is a growth trend of e-commerce from west to east, and it is obvious to see that e-commerce development has a space-time clustering, especially around the Yangtze R...

  6. Using Unmanned Aerial Vehicles (UAV to Quantify Spatial Gap Patterns in Forests

    Directory of Open Access Journals (Sweden)

    Stephan Getzin

    2014-07-01

    Full Text Available Gap distributions in forests reflect the spatial impact of man-made tree harvesting or naturally-induced patterns of tree death being caused by windthrow, inter-tree competition, disease or senescence. Gap sizes can vary from large (>100 m2 to small (<10 m2, and they may have contrasting spatial patterns, such as being aggregated or regularly distributed. However, very small gaps cannot easily be recorded with conventional aerial or satellite images, which calls for new and cost-effective methodologies of forest monitoring. Here, we used an unmanned aerial vehicle (UAV and very high-resolution images to record the gaps in 10 temperate managed and unmanaged forests in two regions of Germany. All gaps were extracted for 1-ha study plots and subsequently analyzed with spatially-explicit statistics, such as the conventional pair correlation function (PCF, the polygon-based PCF and the mark correlation function. Gap-size frequency was dominated by small gaps of an area <5 m2, which were particularly frequent in unmanaged forests. We found that gap distances showed a variety of patterns. However, the polygon-based PCF was a better descriptor of patterns than the conventional PCF, because it showed randomness or aggregation for cases when the conventional PCF showed small-scale regularity; albeit, the latter was only a mathematical artifact. The mark correlation function revealed that gap areas were in half of the cases negatively correlated and in the other half independent. Negative size correlations may likely be the result of single-tree harvesting or of repeated gap formation, which both lead to nearby small gaps. Here, we emphasize the usefulness of UAV to record forest gaps of a very small size. These small gaps may originate from repeated gap-creating disturbances, and their spatial patterns should be monitored with spatially-explicit statistics at recurring intervals in order to further insights into forest dynamics.

  7. Balancing geo-privacy and spatial patterns in epidemiological studies

    Directory of Open Access Journals (Sweden)

    Chien-Chou Chen

    2017-11-01

    Full Text Available To balance the protection of geo-privacy and the accuracy of spatial patterns, we developed a geo-spatial tool (GeoMasker intended to mask the residential locations of patients or cases in a geographic information system (GIS. To elucidate the effects of geo-masking parameters, we applied 2010 dengue epidemic data from Taiwan testing the tool’s performance in an empirical situation. The similarity of pre- and post-spatial patterns was measured by D statistics under a 95% confidence interval. In the empirical study, different magnitudes of anonymisation (estimated Kanonymity ≥10 and 100 were achieved and different degrees of agreement on the pre- and post-patterns were evaluated. The application is beneficial for public health workers and researchers when processing data with individuals’ spatial information.

  8. Analysis of Spatial Pattern among Grasshopper and Vegetation in Heihe based on GIS

    Science.gov (United States)

    Zhou, Wei; Wang, KeMing; Zhao, Chengzhang; Zhang, Qi-peng

    Geostatistics was used to analyze the grasshopper and dominant plants population spatial pattern and their relationship in the upper reaches of Heihe River under GIS platform. The results showed that the plants and grasshoppers populations have strong spatial correlation in study area. The Semivariogram curve of Chorthippus brunneus huabeiensis, Filchnerella, Aneurolepidium dasystanchys and Artemisia dalailamae is spherical model, Gomphocerus licenti and Stipa krylovii's Semivariogram curve is exponential and Gaussian model respectively, and their spatial autocorrelation scope is 10.8, 11.3, 11.5, 12.4, 23.5 and 59.7 meters respectively. Stipa krylovii and Artemisia dalailamae spatial distribution was patchy, Aneurolepidium dasystanchys showed flaky distribution; Gomphocerus licenti and Chorthippus brunneus huabeiensis mainly located in southeast areas with high coverage of Stipa krylovii and Aneurolepidium dasystanchys. Filchnerella nearly located in North areas with high coverage of Artemisia dalailamae, but were rarely found in south and east areas. The effects of different plants coverage on grasshopper abundance are significantly different. Filchnerella abundance and Artemisia dalailamae coverage showed significantly positive correlation, Chorthippus brunneus huabeiensis and Gomphocerus licenti positively correlated with Aneurolepidium dasystanchys and Stipa krylovii. Grasshopper spatial patterns and occurrence numbers are both influenced by grasshopper biological characteristics and plant community composition, which reflected complex coupled relation between grasshopper and plant.

  9. Macroecological factors shape local-scale spatial patterns in agriculturalist settlements.

    Science.gov (United States)

    Tao, Tingting; Abades, Sebastián; Teng, Shuqing; Huang, Zheng Y X; Reino, Luís; Chen, Bin J W; Zhang, Yong; Xu, Chi; Svenning, Jens-Christian

    2017-11-15

    Macro-scale patterns of human systems ranging from population distribution to linguistic diversity have attracted recent attention, giving rise to the suggestion that macroecological rules shape the assembly of human societies. However, in which aspects the geography of our own species is shaped by macroecological factors remains poorly understood. Here, we provide a first demonstration that macroecological factors shape strong local-scale spatial patterns in human settlement systems, through an analysis of spatial patterns in agriculturalist settlements in eastern mainland China based on high-resolution Google Earth images. We used spatial point pattern analysis to show that settlement spatial patterns are characterized by over-dispersion at fine spatial scales (0.05-1.4 km), consistent with territory segregation, and clumping at coarser spatial scales beyond the over-dispersion signals, indicating territorial clustering. Statistical modelling shows that, at macroscales, potential evapotranspiration and topographic heterogeneity have negative effects on territory size, but positive effects on territorial clustering. These relationships are in line with predictions from territory theory for hunter-gatherers as well as for many animal species. Our results help to disentangle the complex interactions between intrinsic spatial processes in agriculturalist societies and external forcing by macroecological factors. While one may speculate that humans can escape ecological constraints because of unique abilities for environmental modification and globalized resource transportation, our work highlights that universal macroecological principles still shape the geography of current human agricultural societies. © 2017 The Author(s).

  10. Exploring spatial patterns and hotspots of diarrhea in Chiang Mai, Thailand

    Directory of Open Access Journals (Sweden)

    Tripathi Nitin K

    2009-06-01

    Full Text Available Abstract Background Diarrhea is a major public health problem in Thailand. The Ministry of Public Health, Thailand, has been trying to monitor and control this disease for many years. The methodology and the results from this study could be useful for public health officers to develop a system to monitor and prevent diarrhea outbreaks. Methods The objective of this study was to analyse the epidemic outbreak patterns of diarrhea in Chiang Mai province, Northern Thailand, in terms of their geographical distributions and hotspot identification. The data of patients with diarrhea at village level and the 2001–2006 population censuses were collected to achieve the objective. Spatial analysis, using geographic information systems (GIS and other methods, was used to uncover the hidden phenomena from the data. In the data analysis section, spatial statistics such as quadrant analysis (QA, nearest neighbour analysis (NNA, and spatial autocorrelation analysis (SAA, were used to identify the spatial patterns of diarrhea in Chiang Mai province. In addition, local indicators of spatial association (LISA and kernel density (KD estimation were used to detect diarrhea hotspots using data at village level. Results The hotspot maps produced by the LISA and KD techniques showed spatial trend patterns of diarrhea diffusion. Villages in the middle and northern regions revealed higher incidences. Also, the spatial patterns of diarrhea during the years 2001 and 2006 were found to represent spatially clustered patterns, both at global and local scales. Conclusion Spatial analysis methods in GIS revealed the spatial patterns and hotspots of diarrhea in Chiang Mai province from the year 2001 to 2006. To implement specific and geographically appropriate public health risk-reduction programs, the use of such spatial analysis tools may become an integral component in the epidemiologic description, analysis, and risk assessment of diarrhea.

  11. The SPAtial EFficiency metric (SPAEF): multiple-component evaluation of spatial patterns for optimization of hydrological models

    Science.gov (United States)

    Koch, Julian; Cüneyd Demirel, Mehmet; Stisen, Simon

    2018-05-01

    The process of model evaluation is not only an integral part of model development and calibration but also of paramount importance when communicating modelling results to the scientific community and stakeholders. The modelling community has a large and well-tested toolbox of metrics to evaluate temporal model performance. In contrast, spatial performance evaluation does not correspond to the grand availability of spatial observations readily available and to the sophisticate model codes simulating the spatial variability of complex hydrological processes. This study makes a contribution towards advancing spatial-pattern-oriented model calibration by rigorously testing a multiple-component performance metric. The promoted SPAtial EFficiency (SPAEF) metric reflects three equally weighted components: correlation, coefficient of variation and histogram overlap. This multiple-component approach is found to be advantageous in order to achieve the complex task of comparing spatial patterns. SPAEF, its three components individually and two alternative spatial performance metrics, i.e. connectivity analysis and fractions skill score, are applied in a spatial-pattern-oriented model calibration of a catchment model in Denmark. Results suggest the importance of multiple-component metrics because stand-alone metrics tend to fail to provide holistic pattern information. The three SPAEF components are found to be independent, which allows them to complement each other in a meaningful way. In order to optimally exploit spatial observations made available by remote sensing platforms, this study suggests applying bias insensitive metrics which further allow for a comparison of variables which are related but may differ in unit. This study applies SPAEF in the hydrological context using the mesoscale Hydrologic Model (mHM; version 5.8), but we see great potential across disciplines related to spatially distributed earth system modelling.

  12. Variable gene dispersal conditions and spatial deforestation patterns can interact to affect tropical tree conservation outcomes.

    Science.gov (United States)

    Kashimshetty, Yamini; Pelikan, Stephan; Rogstad, Steven H

    2015-01-01

    Tropical lowland rain forest (TLRF) biodiversity is under threat from anthropogenic factors including deforestation which creates forest fragments of different sizes that can further undergo various internal patterns of logging. Such interventions can modify previous equilibrium abundance and spatial distribution patterns of offspring recruitment and/or pollen dispersal. Little is known about how these aspects of deforestation and fragmentation might synergistically affect TLRF tree recovery demographics and population genetics in newly formed forest fragments. To investigate these TLRF anthropogenic disturbance processes we used the computer program NEWGARDEN (NG), which models spatially-explicit, individual-based plant populations, to simulate 10% deforestation in six different spatial logging patterns for the plant functional type of a long-lived TLRF canopy tree species. Further, each logging pattern was analyzed under nine varying patterns of offspring versus pollen dispersal distances that could have arisen post-fragmentation. Results indicated that gene dispersal condition (especially via offspring) had a greater effect on population growth and genetic diversity retention (explaining 98.5% and 88.8% of the variance respectively) than spatial logging pattern (0.2% and 4.7% respectively), with 'Near' distance dispersal maximizing population growth and genetic diversity relative to distant dispersal. Within logged regions of the fragment, deforestation patterns closer to fragment borders more often exhibited lower population recovery rates and founding genetic diversity retention relative to more centrally located logging. These results suggest newly isolated fragments have populations that are more sensitive to the way in which their offspring and pollen dispersers are affected than the spatial pattern in which subsequent logging occurs, and that large variation in the recovery rates of different TLRF tree species attributable to altered gene dispersal

  13. Laser direct-write of single microbeads into spatially-ordered patterns

    International Nuclear Information System (INIS)

    Phamduy, Theresa B; Schiele, Nathan R; Corr, David T; Chrisey, Douglas B; Raof, Nurazhani Abdul; Xie Yubing; Yan Zijie; Huang Yong

    2012-01-01

    Fabrication of heterogeneous microbead patterns on a bead-by-bead basis promotes new opportunities for sensors, lab-on-a-chip technology and cell-culturing systems within the context of customizable constructs. Laser direct-write (LDW) was utilized to target and deposit solid polystyrene and stem cell-laden alginate hydrogel beads into computer-programmed patterns. We successfully demonstrated single-bead printing resolution and fabricated spatially-ordered patterns of microbeads. The probability of successful microbead transfer from the ribbon surface increased from 0 to 80% with decreasing diameter of 600 to 45 µm, respectively. Direct-written microbeads retained spatial pattern registry, even after 10 min of ultrasonication treatment. SEM imaging confirmed immobilization of microbeads. Viability of cells encapsulated in transferred hydrogel microbeads achieved 37 ± 11% immediately after the transfer process, whereas randomly-patterned pipetted control beads achieved a viability of 51 ± 25%. Individual placement of >10 µm diameter microbeads onto planar surfaces has previously been unattainable. We have demonstrated LDW as a valuable tool for the patterning of single, micrometer-diameter beads into spatially-ordered patterns. (paper)

  14. Spatial pattern and ecological process in the coffee agroforestry system.

    Science.gov (United States)

    Perfecto, Ivette; Vandermeer, John

    2008-04-01

    The coffee agroforestry system provides an ideal platform for the study of spatial ecology. The uniform pattern of the coffee plants and shade trees allows for the study of pattern generation through intrinsic biological forces rather than extrinsic habitat patchiness. Detailed studies, focusing on a key mutualism between an ant (Azteca instabilis) and a scale insect (Coccus viridis), conducted in a 45-ha plot in a coffee agroforestry system have provided insights into (1) the quantitative evaluation of spatial pattern of the scale insect Coccus viridis on coffee bushes, (2) the mechanisms for the generation of patterns through the combination of local satellite ant nest formation and regional control from natural enemies, and (3) the consequences of the spatial pattern for the stability of predator-prey (host-parasitoid) systems, for a key coccinelid beetle preying on the scale insects and a phorid fly parasitoid parasitizing the ant.

  15. Spatial Pattern and Regional Relevance Analysis of the Maritime Silk Road Shipping Network

    Directory of Open Access Journals (Sweden)

    Naixia Mou

    2018-03-01

    Full Text Available Under the strategy of “One Belt and One Road”, this paper explores the spatial pattern and the status quo of regional trade relevance of the Maritime Silk Road shipping network. Based on complex network theory, a topological structure map of shipping networks for containers, tankers, and bulk carriers was constructed, and the spatial characteristics of shipping networks were analyzed. Using the mode of spatial arrangement and the Herfindahl–Hirschman Index, this paper further analyzes the traffic flow pattern of regional trade of three kinds of goods. It is shown that the shipping network of containers, tankers and bulk carriers are unevenly distributed and have regional agglomeration phenomena. There is a strong correlation between the interior of the region and the adjacent areas, and the port competition is fierce. Among them, the container ships network is the most competitive in the region, while the competitiveness of the tankers network is relatively the lowest. The inter-regional correlation is weak, and a few transit hub ports have obvious competitive advantages. The ports in Northeast Asia and Southeast Asia are the most significant. The research results combined with the Maritime Silk Road policy can provide reference for port construction, route optimization, and coordinated development of regional trade, which will help to save time and cost of marine transportation, reduce energy consumption, and promote the sustainable development of marine environment and regional trade on the Maritime Silk Road.

  16. Spatial pattern of Baccharis platypoda shrub as determined by sex and life stages

    Science.gov (United States)

    Fonseca, Darliana da Costa; de Oliveira, Marcio Leles Romarco; Pereira, Israel Marinho; Gonzaga, Anne Priscila Dias; de Moura, Cristiane Coelho; Machado, Evandro Luiz Mendonça

    2017-11-01

    Spatial patterns of dioecious species can be determined by their nutritional requirements and intraspecific competition, apart from being a response to environmental heterogeneity. The aim of the study was to evaluate the spatial pattern of populations of a dioecious shrub reporting to sex and reproductive stage patterns of individuals. Sampling was carried out in three areas located in the meridional portion of Serra do Espinhaço, where in individuals of the studied species were mapped. The spatial pattern was determined through O-ring analysis and Ripley's K-function and the distribution of individuals' frequencies was verified through x2 test. Populations in two areas showed an aggregate spatial pattern tending towards random or uniform according to the observed scale. Male and female adults presented an aggregate pattern at smaller scales, while random and uniform patterns were verified above 20 m for individuals of both sexes of the areas A2 and A3. Young individuals presented an aggregate pattern in all areas and spatial independence in relation to adult individuals, especially female plants. The interactions between individuals of both genders presented spatial independence with respect to spatial distribution. Baccharis platypoda showed characteristics in accordance with the spatial distribution of savannic and dioecious species, whereas the population was aggregated tending towards random at greater spatial scales. Young individuals showed an aggregated pattern at different scales compared to adults, without positive association between them. Female and male adult individuals presented similar characteristics, confirming that adult individuals at greater scales are randomly distributed despite their distinct preferences for environments with moisture variation.

  17. Spatially patterned matrix elasticity directs stem cell fate

    Science.gov (United States)

    Yang, Chun; DelRio, Frank W.; Ma, Hao; Killaars, Anouk R.; Basta, Lena P.; Kyburz, Kyle A.; Anseth, Kristi S.

    2016-08-01

    There is a growing appreciation for the functional role of matrix mechanics in regulating stem cell self-renewal and differentiation processes. However, it is largely unknown how subcellular, spatial mechanical variations in the local extracellular environment mediate intracellular signal transduction and direct cell fate. Here, the effect of spatial distribution, magnitude, and organization of subcellular matrix mechanical properties on human mesenchymal stem cell (hMSCs) function was investigated. Exploiting a photodegradation reaction, a hydrogel cell culture substrate was fabricated with regions of spatially varied and distinct mechanical properties, which were subsequently mapped and quantified by atomic force microscopy (AFM). The variations in the underlying matrix mechanics were found to regulate cellular adhesion and transcriptional events. Highly spread, elongated morphologies and higher Yes-associated protein (YAP) activation were observed in hMSCs seeded on hydrogels with higher concentrations of stiff regions in a dose-dependent manner. However, when the spatial organization of the mechanically stiff regions was altered from a regular to randomized pattern, lower levels of YAP activation with smaller and more rounded cell morphologies were induced in hMSCs. We infer from these results that irregular, disorganized variations in matrix mechanics, compared with regular patterns, appear to disrupt actin organization, and lead to different cell fates; this was verified by observations of lower alkaline phosphatase (ALP) activity and higher expression of CD105, a stem cell marker, in hMSCs in random versus regular patterns of mechanical properties. Collectively, this material platform has allowed innovative experiments to elucidate a novel spatial mechanical dosing mechanism that correlates to both the magnitude and organization of spatial stiffness.

  18. Abiotic and biotic controls of spatial pattern at alpine treeline

    Science.gov (United States)

    Malanson, George P.; Xiao, Ningchuan; Alftine, K.J.; Bekker, Mathew; Butler, David R.; Brown, Daniel G.; Cairns, David M.; Fagre, Daniel; Walsh, Stephen J.

    2000-01-01

    At alpine treeline, trees and krummholz forms affect the environment in ways that increase their growth and reproduction. We assess the way in which these positive feedbacks combine in spatial patterns to alter the environment in the neighborhood of existing plants. The research is significant because areas of alpine tundra are susceptible to encroachment by woody species as climate changes. Moreover, understanding the general processes of plant invasion is important. The importance of spatial pattern has been recognized, but the spatial pattern of positive feedbacks per se has not been explored in depth. We present a linked set of models of vegetation change at an alpine forest-tundra ecotone. Our aim is to create models that are as simple as possible in order to test specific hypotheses. We present results from a model of the resource averaging hypothesis and the positive feedback switch hypothesis of treelines. We compare the patterns generated by the models to patterns observed in fine scale remotely sensed data.

  19. Spatial and temporal air quality pattern recognition using environmetric techniques: a case study in Malaysia.

    Science.gov (United States)

    Syed Abdul Mutalib, Sharifah Norsukhairin; Juahir, Hafizan; Azid, Azman; Mohd Sharif, Sharifah; Latif, Mohd Talib; Aris, Ahmad Zaharin; Zain, Sharifuddin M; Dominick, Doreena

    2013-09-01

    The objective of this study is to identify spatial and temporal patterns in the air quality at three selected Malaysian air monitoring stations based on an eleven-year database (January 2000-December 2010). Four statistical methods, Discriminant Analysis (DA), Hierarchical Agglomerative Cluster Analysis (HACA), Principal Component Analysis (PCA) and Artificial Neural Networks (ANNs), were selected to analyze the datasets of five air quality parameters, namely: SO2, NO2, O3, CO and particulate matter with a diameter size of below 10 μm (PM10). The three selected air monitoring stations share the characteristic of being located in highly urbanized areas and are surrounded by a number of industries. The DA results show that spatial characterizations allow successful discrimination between the three stations, while HACA shows the temporal pattern from the monthly and yearly factor analysis which correlates with severe haze episodes that have happened in this country at certain periods of time. The PCA results show that the major source of air pollution is mostly due to the combustion of fossil fuel in motor vehicles and industrial activities. The spatial pattern recognition (S-ANN) results show a better prediction performance in discriminating between the regions, with an excellent percentage of correct classification compared to DA. This study presents the necessity and usefulness of environmetric techniques for the interpretation of large datasets aiming to obtain better information about air quality patterns based on spatial and temporal characterizations at the selected air monitoring stations.

  20. Spatial patterns of seaweed distribution in Malaysia using GIS

    Science.gov (United States)

    Lian, Du Hai; Sim, Jillian Ooi Lean; Fauzi, Rosmadi; Moi, Phang Siew

    2008-10-01

    The objective of this article is to represent spatial patterns of seaweed distribution in Malaysia. Seaweeds have been collected since 1984 along coastlines of 4675 km of peninsular Malaysia, Sabah, and Sarawak. However, there is no seaweed database and they cannot be displayed in a geographic view. Therefore, a database with 805 georeferenced observations was setup and GIS is used to analyze seaweed diversity based on this database. The highest number of observations is 94 which occur along east coastline of peninsular Malaysia. The highest number of species richness is 82 which are also along east coastline of peninsular Malaysia. Rhodophyta has the highest species richness while Chlorophyta has the least species richness.

  1. Spatial coherence resonance and spatial pattern transition induced by the decrease of inhibitory effect in a neuronal network

    Science.gov (United States)

    Tao, Ye; Gu, Huaguang; Ding, Xueli

    2017-10-01

    Spiral waves were observed in the biological experiment on rat brain cortex with the application of carbachol and bicuculline which can block inhibitory coupling from interneurons to pyramidal neurons. To simulate the experimental spiral waves, a two-dimensional neuronal network composed of pyramidal neurons and inhibitory interneurons was built. By decreasing the percentage of active inhibitory interneurons, the random-like spatial patterns change to spiral waves and to random-like spatial patterns or nearly synchronous behaviors. The spiral waves appear at a low percentage of inhibitory interneurons, which matches the experimental condition that inhibitory couplings of the interneurons were blocked. The spiral waves exhibit a higher order or signal-to-noise ratio (SNR) characterized by spatial structure function than both random-like spatial patterns and nearly synchronous behaviors, which shows that changes of the percentage of active inhibitory interneurons can induce spatial coherence resonance-like behaviors. In addition, the relationship between the coherence degree and the spatial structures of the spiral waves is identified. The results not only present a possible and reasonable interpretation to the spiral waves observed in the biological experiment on the brain cortex with disinhibition, but also reveal that the spiral waves exhibit more ordered degree in spatial patterns.

  2. Variable gene dispersal conditions and spatial deforestation patterns can interact to affect tropical tree conservation outcomes.

    Directory of Open Access Journals (Sweden)

    Yamini Kashimshetty

    Full Text Available Tropical lowland rain forest (TLRF biodiversity is under threat from anthropogenic factors including deforestation which creates forest fragments of different sizes that can further undergo various internal patterns of logging. Such interventions can modify previous equilibrium abundance and spatial distribution patterns of offspring recruitment and/or pollen dispersal. Little is known about how these aspects of deforestation and fragmentation might synergistically affect TLRF tree recovery demographics and population genetics in newly formed forest fragments. To investigate these TLRF anthropogenic disturbance processes we used the computer program NEWGARDEN (NG, which models spatially-explicit, individual-based plant populations, to simulate 10% deforestation in six different spatial logging patterns for the plant functional type of a long-lived TLRF canopy tree species. Further, each logging pattern was analyzed under nine varying patterns of offspring versus pollen dispersal distances that could have arisen post-fragmentation. Results indicated that gene dispersal condition (especially via offspring had a greater effect on population growth and genetic diversity retention (explaining 98.5% and 88.8% of the variance respectively than spatial logging pattern (0.2% and 4.7% respectively, with 'Near' distance dispersal maximizing population growth and genetic diversity relative to distant dispersal. Within logged regions of the fragment, deforestation patterns closer to fragment borders more often exhibited lower population recovery rates and founding genetic diversity retention relative to more centrally located logging. These results suggest newly isolated fragments have populations that are more sensitive to the way in which their offspring and pollen dispersers are affected than the spatial pattern in which subsequent logging occurs, and that large variation in the recovery rates of different TLRF tree species attributable to altered gene

  3. Spatial pattern of diarrhea based on regional economic and environment by spatial autoregressive model

    Science.gov (United States)

    Bekti, Rokhana Dwi; Nurhadiyanti, Gita; Irwansyah, Edy

    2014-10-01

    The diarrhea case pattern information, especially for toddler, is very important. It is used to show the distribution of diarrhea in every region, relationship among that locations, and regional economic characteristic or environmental behavior. So, this research uses spatial pattern to perform them. This method includes: Moran's I, Spatial Autoregressive Models (SAR), and Local Indicator of Spatial Autocorrelation (LISA). It uses sample from 23 sub districts of Bekasi Regency, West Java, Indonesia. Diarrhea case, regional economic, and environmental behavior of households have a spatial relationship among sub district. SAR shows that the percentage of Regional Gross Domestic Product is significantly effect on diarrhea at α = 10%. Therefore illiteracy and health center facilities are significant at α = 5%. With LISA test, sub districts in southern Bekasi have high dependencies with Cikarang Selatan, Serang Baru, and Setu. This research also builds development application that is based on java and R to support data analysis.

  4. Spatial pattern enhances ecosystem functioning in an African savanna.

    Directory of Open Access Journals (Sweden)

    Robert M Pringle

    2010-05-01

    Full Text Available The finding that regular spatial patterns can emerge in nature from local interactions between organisms has prompted a search for the ecological importance of these patterns. Theoretical models have predicted that patterning may have positive emergent effects on fundamental ecosystem functions, such as productivity. We provide empirical support for this prediction. In dryland ecosystems, termite mounds are often hotspots of plant growth (primary productivity. Using detailed observations and manipulative experiments in an African savanna, we show that these mounds are also local hotspots of animal abundance (secondary and tertiary productivity: insect abundance and biomass decreased with distance from the nearest termite mound, as did the abundance, biomass, and reproductive output of insect-eating predators. Null-model analyses indicated that at the landscape scale, the evenly spaced distribution of termite mounds produced dramatically greater abundance, biomass, and reproductive output of consumers across trophic levels than would be obtained in landscapes with randomly distributed mounds. These emergent properties of spatial pattern arose because the average distance from an arbitrarily chosen point to the nearest feature in a landscape is minimized in landscapes where the features are hyper-dispersed (i.e., uniformly spaced. This suggests that the linkage between patterning and ecosystem functioning will be common to systems spanning the range of human management intensities. The centrality of spatial pattern to system-wide biomass accumulation underscores the need to conserve pattern-generating organisms and mechanisms, and to incorporate landscape patterning in efforts to restore degraded habitats and maximize the delivery of ecosystem services.

  5. Spatial pattern enhances ecosystem functioning in an African savanna.

    Science.gov (United States)

    Pringle, Robert M; Doak, Daniel F; Brody, Alison K; Jocqué, Rudy; Palmer, Todd M

    2010-05-25

    The finding that regular spatial patterns can emerge in nature from local interactions between organisms has prompted a search for the ecological importance of these patterns. Theoretical models have predicted that patterning may have positive emergent effects on fundamental ecosystem functions, such as productivity. We provide empirical support for this prediction. In dryland ecosystems, termite mounds are often hotspots of plant growth (primary productivity). Using detailed observations and manipulative experiments in an African savanna, we show that these mounds are also local hotspots of animal abundance (secondary and tertiary productivity): insect abundance and biomass decreased with distance from the nearest termite mound, as did the abundance, biomass, and reproductive output of insect-eating predators. Null-model analyses indicated that at the landscape scale, the evenly spaced distribution of termite mounds produced dramatically greater abundance, biomass, and reproductive output of consumers across trophic levels than would be obtained in landscapes with randomly distributed mounds. These emergent properties of spatial pattern arose because the average distance from an arbitrarily chosen point to the nearest feature in a landscape is minimized in landscapes where the features are hyper-dispersed (i.e., uniformly spaced). This suggests that the linkage between patterning and ecosystem functioning will be common to systems spanning the range of human management intensities. The centrality of spatial pattern to system-wide biomass accumulation underscores the need to conserve pattern-generating organisms and mechanisms, and to incorporate landscape patterning in efforts to restore degraded habitats and maximize the delivery of ecosystem services.

  6. Complex temporal and spatial patterns in nonequilibrium processes

    International Nuclear Information System (INIS)

    Swinney, H.L.

    1992-01-01

    We have used dynamical systems methods to study and characterize bifurcations and pattern formation in a variety of nonequilibrium systems. In this paper we describe our work on dynamical systems, chemical oscillations and chaos, chemical spatial patterns, instabilities in fluid dynamics, electrodeposition clusters, the ballast resistor, and crack propagation

  7. 1988 Wet deposition temporal and spatial patterns in North America

    Energy Technology Data Exchange (ETDEWEB)

    Simpson, J.C.; Olsen, A.R.; Bittner, E.A.

    1992-03-01

    The focus of this report is on North American wet deposition temporal patterns from 1979 to 1988 and spatial patterns for 1988. It is the third in a series of reports that investigate the patterns of annual precipitation-weighted average concentration and annual deposition for nine ion species: hydrogen, sulfate, nitrate, ammonium, calcium, chloride, sodium, potassium, and magnesium. Mosaic maps, based on surface estimation using kriging, display concentration and deposition spatial patterns of pH, hydrogen, sulfate, nitrate, ammonium, and calcium ion species for 1988 annual, winter, and summer periods. Temporal pattern analyses use a subset of 35 sites over a 10-year (1979--1988) period and an expanded subset of 137 sites, with greater spatial coverage, over a 7-year (1982--1988) period. The 10-year period represents the longest period with wet deposition monitoring data available that has a sufficient number of sites with data of known quality to allow a descriptive summary of annual temporal patterns. Sen's median trend estimate and Kendall's seasonal tau (KST) test are calculated for each ion species concentration and deposition at each site in both subsets.

  8. 1988 Wet deposition temporal and spatial patterns in North America

    Energy Technology Data Exchange (ETDEWEB)

    Simpson, J.C.; Olsen, A.R.; Bittner, E.A.

    1992-03-01

    The focus of this report is on North American wet deposition temporal patterns from 1979 to 1988 and spatial patterns for 1988. It is the third in a series of reports that investigate the patterns of annual precipitation-weighted average concentration and annual deposition for nine ion species: hydrogen, sulfate, nitrate, ammonium, calcium, chloride, sodium, potassium, and magnesium. Mosaic maps, based on surface estimation using kriging, display concentration and deposition spatial patterns of pH, hydrogen, sulfate, nitrate, ammonium, and calcium ion species for 1988 annual, winter, and summer periods. Temporal pattern analyses use a subset of 35 sites over a 10-year (1979--1988) period and an expanded subset of 137 sites, with greater spatial coverage, over a 7-year (1982--1988) period. The 10-year period represents the longest period with wet deposition monitoring data available that has a sufficient number of sites with data of known quality to allow a descriptive summary of annual temporal patterns. Sen`s median trend estimate and Kendall`s seasonal tau (KST) test are calculated for each ion species concentration and deposition at each site in both subsets.

  9. Selective memory generalization by spatial patterning of protein synthesis.

    Science.gov (United States)

    O'Donnell, Cian; Sejnowski, Terrence J

    2014-04-16

    Protein synthesis is crucial for both persistent synaptic plasticity and long-term memory. De novo protein expression can be restricted to specific neurons within a population, and to specific dendrites within a single neuron. Despite its ubiquity, the functional benefits of spatial protein regulation for learning are unknown. We used computational modeling to study this problem. We found that spatially patterned protein synthesis can enable selective consolidation of some memories but forgetting of others, even for simultaneous events that are represented by the same neural population. Key factors regulating selectivity include the functional clustering of synapses on dendrites, and the sparsity and overlap of neural activity patterns at the circuit level. Based on these findings, we proposed a two-step model for selective memory generalization during REM and slow-wave sleep. The pattern-matching framework we propose may be broadly applicable to spatial protein signaling throughout cortex and hippocampus. Copyright © 2014 Elsevier Inc. All rights reserved.

  10. An exploration of spatial patterns of seasonal diarrhoeal morbidity in Thailand.

    Science.gov (United States)

    McCormick, B J J; Alonso, W J; Miller, M A

    2012-07-01

    Studies of temporal and spatial patterns of diarrhoeal disease can suggest putative aetiological agents and environmental or socioeconomic drivers. Here, the seasonal patterns of monthly acute diarrhoeal morbidity in Thailand, where diarrhoeal morbidity is increasing, are explored. Climatic data (2003-2006) and Thai Ministry of Health annual reports (2003-2009) were used to construct a spatially weighted panel regression model. Seasonal patterns of diarrhoeal disease were generally bimodal with aetiological agents peaking at different times of the year. There is a strong association between daily mean temperature and precipitation and the incidence of hospitalization due to acute diarrhoea in Thailand leading to a distinct spatial pattern in the seasonal pattern of diarrhoea. Model performance varied across the country in relation to per capita GDP and population density. While climatic factors are likely to drive the general pattern of diarrhoeal disease in Thailand, the seasonality of diarrhoeal disease is dampened in affluent urban populations.

  11. [Spatial pattern analysis and associations of Quercus aquifolioides population at different growth stages in Southeast Tibet, China].

    Science.gov (United States)

    Shen, Zhi-qiang; Hua, Min; Dan, Qu; Lu, Jie; Fang, Jiang-ping

    2016-02-01

    This article analyzed the spatial pattern and its correlation of Quercus aquifolioides, Southeast Tibet at different growing stages by using Ripley' s L function in the method of point pattern, analysis. The results showed the diameter structure of Q. aquifolioides population in Southeast Tibet followed a 'single peak' shape and the saplings and medium trees predominated in number in the whole population. The population had a high regeneration rate and was of increase type. In the growth process of Q. aquifolioides from saplings to large trees, saplings and medium trees showed aggregation distribution at.small scale, while large trees showed basically random distribution at whole scale. There was significant correlation between saplings with medium or large trees at small scale, however, there was no correlation between medium and large trees. In the growth process of Q. aquifolioides population from saplings, medium trees to large trees, its spatial pattern developed from aggregative distribution to random distribution. The natural regeneration of Q. aquifolioides population was affected not only by interspecific competition, but also by intraspecific competition. In the similar natural environment, the most important factors affecting the spatial pattern of Q. aquifoioides population were its own biological and ecological characteristics.

  12. [Characteristics of temporal-spatial differentiation in landscape pattern vulnerability in Nansihu Lake wetland, China.

    Science.gov (United States)

    Liang, Jia Xin; Li, Xin Ju

    2018-02-01

    With remote sensing images from 1985, 2000 Lantsat 5 TM and 2015 Lantsat 8 OLI as data sources, we tried to select the suitable research scale and examine the temporal-spatial diffe-rentiation with such scale in the Nansihu Lake wetland by using landscape pattern vulnerability index constructed by sensitivity index and adaptability index, and combined with space statistics such as semivariogram and spatial autocorrelation. The results showed that 1 km × 1 km equidistant grid was the suitable research scale, which could eliminate the influence of spatial heterogeneity induced by random factors. From 1985 to 2015, the landscape pattern vulnerability in the Nansihu Lake wetland deteriorated gradually. The high-risk area of landscape pattern vulnerability dramatically expanded with time. The spatial heterogeneity of landscape pattern vulnerability increased, and the influence of non-structural factors on landscape pattern vulnerability strengthened. Spatial variability affected by spatial autocorrelation slightly weakened. Landscape pattern vulnerability had strong general spatial positive correlation, with the significant form of spatial agglomeration. The positive spatial autocorrelation continued to increase and the phenomenon of spatial concentration was more and more obvious over time. The local autocorrelation mainly based on high-high accumulation zone and low-low accumulation zone had stronger spatial autocorrelation among neighboring space units. The high-high accumulation areas showed the strongest level of significance, and the significant level of low-low accumulation zone increased with time. Natural factors, such as temperature and precipitation, affected water-level and landscape distribution, and thus changed the landscape patterns vulnerability of Nansihu Lake wetland. The dominant driver for the deterioration of landscape patterns vulnerability was human activities, including social economy activity and policy system.

  13. A novel spatial performance metric for robust pattern optimization of distributed hydrological models

    Science.gov (United States)

    Stisen, S.; Demirel, C.; Koch, J.

    2017-12-01

    Evaluation of performance is an integral part of model development and calibration as well as it is of paramount importance when communicating modelling results to stakeholders and the scientific community. There exists a comprehensive and well tested toolbox of metrics to assess temporal model performance in the hydrological modelling community. On the contrary, the experience to evaluate spatial performance is not corresponding to the grand availability of spatial observations readily available and to the sophisticate model codes simulating the spatial variability of complex hydrological processes. This study aims at making a contribution towards advancing spatial pattern oriented model evaluation for distributed hydrological models. This is achieved by introducing a novel spatial performance metric which provides robust pattern performance during model calibration. The promoted SPAtial EFficiency (spaef) metric reflects three equally weighted components: correlation, coefficient of variation and histogram overlap. This multi-component approach is necessary in order to adequately compare spatial patterns. spaef, its three components individually and two alternative spatial performance metrics, i.e. connectivity analysis and fractions skill score, are tested in a spatial pattern oriented model calibration of a catchment model in Denmark. The calibration is constrained by a remote sensing based spatial pattern of evapotranspiration and discharge timeseries at two stations. Our results stress that stand-alone metrics tend to fail to provide holistic pattern information to the optimizer which underlines the importance of multi-component metrics. The three spaef components are independent which allows them to complement each other in a meaningful way. This study promotes the use of bias insensitive metrics which allow comparing variables which are related but may differ in unit in order to optimally exploit spatial observations made available by remote sensing

  14. 1987 wet deposition temporal and spatial patterns in North America

    Energy Technology Data Exchange (ETDEWEB)

    Simpson, J.C.; Olsen, A.R.

    1990-03-01

    The focus of this report is on North American wet deposition temporal patterns from 1979 to 1987 and spatial patterns for 1987. The report investigates the patterns of annual precipitation-weighted average concentration and annual deposition for nine ion species: hydrogen, sulfate, nitrate, ammonium, calcium, chloride, sodium, potassium, and magnesium. Data are from the Acid Deposition System (ADS) for the statistical reporting of North American deposition data which includes the National Atmospheric Deposition Program/National Trends Network (NADP/NTN), the MAP3S precipitation chemistry network, the Utility Acid Precipitation Study Program (UAPSP), the Canadian Precipitation Monitoring Network (CAPMoN), and the daily and 4-weekly Acidic Precipitation in Ontario Study (APIOS-D and APIOS-C). Mosaic maps, based on surface estimation using kriging, display concentration and deposition spatial patterns of pH, hydrogen, sulfate, nitrate, ammonium, and calcium ion species for 1987 annual, winter, and summer periods. The temporal pattern analyses use a subset of 39 sites over a 9-year (1979--1987) period and an expanded subset of 140 sites with greater spatial coverage over a 6-year (1982--1987) period. 68 refs., 15 figs., 15 tabs.

  15. Analyzing Spatial Factors in Crime-inducing Culture in Chaloos

    Directory of Open Access Journals (Sweden)

    Mohammad Hossein Omidi Noghlehbari

    2017-02-01

    Full Text Available Feelings of security in urban areas are one of the qualitative criteria of living space. With the rise in urbanization and increasing abnormal urban behavior, especially offenses, this issue has become of great importance. This study aims to identify and analyze the effects of spatial factors on crime-inducing culture in affluent and non-affluent neighborhoods of Chaloos. The method used in this study is analytical-descriptive and it is practical in terms of objective. In order to study and understand the status of physical-spatial structures of affluent and non-affluent neighborhoods in Chaloos, we used field study method. Data were collected through interview, notes taking and questionnaire. The results indicate that in affluent neighborhoods, all criteria components of spatial differences are above the mean (Mean=3, but in non-affluent neighborhoods, all components are lower than the mean. In addition, there is a significant relationship between criteria components of spatial differences and the formation of crime-inducing culture (except the diagnosis component in the affluent and non-affluent neighborhoods.

  16. Retrieval of Spatial Join Pattern Instances from Sensor Networks

    DEFF Research Database (Denmark)

    Yiu, Man Lung; Mamoulis, Nikos; Bakiras, Spiridon

    2009-01-01

    We study the continuous evaluation of spatial join queries and extensions thereof, defined by interesting combinations of sensor readings (events) that co-occur in a spatial neighborhood. An example of such a pattern is "a high temperature reading in the vicinity of at least four high-pressure re...

  17. [Spatial pattern of forest biomass and its influencing factors in the Great Xing'an Mountains, Heilongjiang Province, China].

    Science.gov (United States)

    Wang, Xiao-Li; Chang, Yu; Chen, Hong-Wei; Hu, Yuan-Man; Jiao, Lin-Lin; Feng, Yu-Ting; Wu, Wen; Wu, Hai-Feng

    2014-04-01

    Based on field inventory data and vegetation index EVI (enhanced vegetation index), the spatial pattern of the forest biomass in the Great Xing'an Mountains, Heilongjiang Province was quantitatively analyzed. Using the spatial analysis and statistics tools in ArcGIS software, the impacts of climatic zone, elevation, slope, aspect and vegetation type on the spatial pattern of forest biomass were explored. The results showed that the forest biomass in the Great Xing'an Mountains was 350 Tg and spatially aggregated with great increasing potentials. Forest biomass density in the cold temperate humid zone (64.02 t x hm(-2)) was higher than that in the temperate humid zone (60.26 t x hm(-2)). The biomass density of each vegetation type was in the order of mixed coniferous forest (65.13 t x hm(-2)) > spruce-fir forest (63.92 t x hm(-2)) > Pinus pumila-Larix gmelinii forest (63.79 t x hm(-2)) > Pinus sylvestris var. mongolica forest (61.97 t x hm(-2)) > Larix gmelinii forest (61.40 t x hm(-2)) > deciduous broadleaf forest (58.96 t x hm(-2)). With the increasing elevation and slope, the forest biomass density first decreased and then increased. The forest biomass density in the shady slopes was greater than that in the sunny slopes. The spatial pattern of forest biomass in the Great Xing' an Mountains exhibited a heterogeneous pattern due to the variation of climatic zone, vegetation type and topographical factor. This spatial heterogeneity needs to be accounted when evaluating forest biomass at regional scales.

  18. Development of a Spatial Decision Support System for Analyzing Changes in Hydro-meteorological Risk

    Science.gov (United States)

    van Westen, Cees

    2013-04-01

    In the framework of the EU FP7 Marie Curie ITN Network "CHANGES: Changing Hydro-meteorological Risks, as Analyzed by a New Generation of European Scientists (http://www.changes-itn.eu)", a spatial decision support system is under development with the aim to analyze the effect of risk reduction planning alternatives on reducing the risk now and in the future, and support decision makers in selecting the best alternatives. The SDSS is one of the main outputs of the CHANGES network, which will develop an advanced understanding of how global changes, related to environmental and climate change as well as socio-economical change, may affect the temporal and spatial patterns of hydro-meteorological hazards and associated risks in Europe; how these changes can be assessed, modeled, and incorporated in sustainable risk management strategies, focusing on spatial planning, emergency preparedness and risk communication. The CHANGES network consists of 11 full partners and 6 associate partners of which 5 private companies, representing 10 European countries. The CHANGES network has hired 12 Early Stage Researchers (ESRs) and is currently hiring 3-6 researchers more for the implementation of the SDSS. The Spatial Decision Support System will be composed of a number of integrated components. The Risk Assessment component allows to carry out spatial risk analysis, with different degrees of complexity, ranging from simple exposure (overlay of hazard and assets maps) to quantitative analysis (using different hazard types, temporal scenarios and vulnerability curves) resulting into risk curves. The platform does not include a component to calculate hazard maps, and existing hazard maps are used as input data for the risk component. The second component of the SDSS is a risk reduction planning component, which forms the core of the platform. This component includes the definition of risk reduction alternatives (related to disaster response planning, risk reduction measures and

  19. Spatial point pattern analysis of human settlements and geographical associations in eastern coastal China - a case study.

    Science.gov (United States)

    Zhang, Zhonghao; Xiao, Rui; Shortridge, Ashton; Wu, Jiaping

    2014-03-10

    Understanding the spatial point pattern of human settlements and their geographical associations are important for understanding the drivers of land use and land cover change and the relationship between environmental and ecological processes on one hand and cultures and lifestyles on the other. In this study, a Geographic Information System (GIS) approach, Ripley's K function and Monte Carlo simulation were used to investigate human settlement point patterns. Remotely sensed tools and regression models were employed to identify the effects of geographical determinants on settlement locations in the Wen-Tai region of eastern coastal China. Results indicated that human settlements displayed regular-random-cluster patterns from small to big scale. Most settlements located on the coastal plain presented either regular or random patterns, while those in hilly areas exhibited a clustered pattern. Moreover, clustered settlements were preferentially located at higher elevations with steeper slopes and south facing aspects than random or regular settlements. Regression showed that influences of topographic factors (elevation, slope and aspect) on settlement locations were stronger across hilly regions. This study demonstrated a new approach to analyzing the spatial patterns of human settlements from a wide geographical prospective. We argue that the spatial point patterns of settlements, in addition to the characteristics of human settlements, such as area, density and shape, should be taken into consideration in the future, and land planners and decision makers should pay more attention to city planning and management. Conceptual and methodological bridges linking settlement patterns to regional and site-specific geographical characteristics will be a key to human settlement studies and planning.

  20. Spatial pattern of 2009 dengue distribution in Kuala Lumpur using GIS application.

    Science.gov (United States)

    Aziz, S; Ngui, R; Lim, Y A L; Sholehah, I; Nur Farhana, J; Azizan, A S; Wan Yusoff, W S

    2012-03-01

    In the last few years in Malaysia, dengue fever has increased dramatically and has caused huge public health concerns. The present study aimed to establish a spatial distribution of dengue cases in the city of Kuala Lumpur using a combination of Geographic Information System (GIS) and spatial statistical tools. Collation of data from 1,618 dengue cases in 2009 was obtained from Kuala Lumpur City Hall (DBKL). These data were processed and then converted into GIS format. Information on the average monthly rainfall was also used to correlate with the distribution pattern of dengue cases. To asses the spatial distribution of dengue cases, Average Nearest Neighbor (ANN) Analysis was applied together with spatial analysis with the ESRI ArcGIS V9.3 programme. Results indicated that the distribution of dengue cases in Kuala Lumpur for the year 2009 was spatially clustered with R value less than 1 (R = 0.42; z-scores = - 4.47; p 1) between August and November. In addition, the mean monthly rainfall has not influenced the distribution pattern of the dengue cases. Implementation of control measures is more difficult for dispersed pattern compared to clustered pattern. From this study, it was found that distribution pattern of dengue cases in Kuala Lumpur in 2009 was spatially distributed (dispersed or clustered) rather than cases occurring randomly. It was proven that by using GIS and spatial statistic tools, we can determine the spatial distribution between dengue and population. Utilization of GIS tools is vital in assisting health agencies, epidemiologist, public health officer, town planner and relevant authorities in developing efficient control measures and contingency programmes to effectively combat dengue fever.

  1. Integrating Spatial and Attribute Characteristics of Extended Voronoi Diagrams in Spatial Patterning Research: A Case Study of Wuhan City in China

    Directory of Open Access Journals (Sweden)

    Zuohua Miao

    2016-07-01

    Full Text Available Rapid urbanization has caused numerous problems, and the urban spatial structure has been a hot topic in sustainable development management. Urban spatial structure is affected by a series of factors. Thus, the research model should synthetically consider the spatial and non-spatial relationship of every element. Here, we propose an extended Voronoi diagram for exploring the urban land spatial pattern. In essence, we first used a principal component analysis method to construct attribute evaluation indicators and obtained the attribute distance for each indicator. Second, we integrated spatial and attribute distances to extend the comparison distance for Voronoi diagrams, and then, we constructed the Voronoi aggregative homogeneous map of the study area. Finally, we make a spatial autocorrelation analysis by using GeoDA and SPSS software. Results show that: (1 the residential land cover aggregation is not significant, but spatial diffusion is obvious; (2 the commercial land cover aggregation is considerable; and (3 the spatial agglomeration degree of the industrial land cover is increased and mainly located in urban fringes. According to the neo-Marxist theory, we briefly analyzed the driving forces for shaping the urban spatial structure. To summarize, our approach yields important insights into the urban spatial structure characterized by attribute similarity with geospatial proximity, which contributes to a better understanding of the urban growth mechanism. In addition, it explicitly identifies ongoing urban transformations, potentially supporting the planning for sustainable urban land use and protection.

  2. Speckle and fringe dynamics in imagingspeckle-pattern interferometry for spatial-filtering velocimetry

    DEFF Research Database (Denmark)

    Jakobsen, Michael Linde; Iversen, Theis F. Q.; Yura, Harold T.

    2011-01-01

    This paper analyzes the dynamics of laser speckles and fringes, formed in an imaging-speckle-pattern interferometer with the purpose of sensing linear three-dimensional motion and out-of-plane components of rotation in real time, using optical spatial-filtering-velocimetry techniques. The ensemble......-average definition of the cross-correlation function is applied to the intensity distributions, obtained in the observation plane at two positions of the object. The theoretical analysis provides a description for the dynamics of both the speckles and the fringes. The analysis reveals that both the magnitude...... and direction of all three linear displacement components of the object movement can be determined. Simultaneously, out-ofplane rotation of the object including the corresponding directions can be determined from the spatial gradient of the in-plane fringe motion throughout the observation plane. The theory...

  3. The spatial patterns of directional phenotypic selection.

    Science.gov (United States)

    Siepielski, Adam M; Gotanda, Kiyoko M; Morrissey, Michael B; Diamond, Sarah E; DiBattista, Joseph D; Carlson, Stephanie M

    2013-11-01

    Local adaptation, adaptive population divergence and speciation are often expected to result from populations evolving in response to spatial variation in selection. Yet, we lack a comprehensive understanding of the major features that characterise the spatial patterns of selection, namely the extent of variation among populations in the strength and direction of selection. Here, we analyse a data set of spatially replicated studies of directional phenotypic selection from natural populations. The data set includes 60 studies, consisting of 3937 estimates of selection across an average of five populations. We performed meta-analyses to explore features characterising spatial variation in directional selection. We found that selection tends to vary mainly in strength and less in direction among populations. Although differences in the direction of selection occur among populations they do so where selection is often weakest, which may limit the potential for ongoing adaptive population divergence. Overall, we also found that spatial variation in selection appears comparable to temporal (annual) variation in selection within populations; however, several deficiencies in available data currently complicate this comparison. We discuss future research needs to further advance our understanding of spatial variation in selection. © 2013 John Wiley & Sons Ltd/CNRS.

  4. The spatial patterns of directional phenotypic selection

    KAUST Repository

    Siepielski, Adam M.

    2013-09-12

    Local adaptation, adaptive population divergence and speciation are often expected to result from populations evolving in response to spatial variation in selection. Yet, we lack a comprehensive understanding of the major features that characterise the spatial patterns of selection, namely the extent of variation among populations in the strength and direction of selection. Here, we analyse a data set of spatially replicated studies of directional phenotypic selection from natural populations. The data set includes 60 studies, consisting of 3937 estimates of selection across an average of five populations. We performed meta-analyses to explore features characterising spatial variation in directional selection. We found that selection tends to vary mainly in strength and less in direction among populations. Although differences in the direction of selection occur among populations they do so where selection is often weakest, which may limit the potential for ongoing adaptive population divergence. Overall, we also found that spatial variation in selection appears comparable to temporal (annual) variation in selection within populations; however, several deficiencies in available data currently complicate this comparison. We discuss future research needs to further advance our understanding of spatial variation in selection. © 2013 John Wiley & Sons Ltd/CNRS.

  5. Understanding Spatiotemporal Patterns of Biking Behavior by Analyzing Massive Bike Sharing Data in Chicago.

    Directory of Open Access Journals (Sweden)

    Xiaolu Zhou

    Full Text Available The growing number of bike sharing systems (BSS in many cities largely facilitates biking for transportation and recreation. Most recent bike sharing systems produce time and location specific data, which enables the study of travel behavior and mobility of each individual. However, despite a rapid growth of interest, studies on massive bike sharing data and the underneath travel pattern are still limited. Few studies have explored and visualized spatiotemporal patterns of bike sharing behavior using flow clustering, nor examined the station functional profiles based on over-demand patterns. This study investigated the spatiotemporal biking pattern in Chicago by analyzing massive BSS data from July to December in 2013 and 2014. The BSS in Chicago gained more popularity. About 15.9% more people subscribed to this service. Specifically, we constructed bike flow similarity graph and used fastgreedy algorithm to detect spatial communities of biking flows. By using the proposed methods, we discovered unique travel patterns on weekdays and weekends as well as different travel trends for customers and subscribers from the noisy massive amount data. In addition, we also examined the temporal demands for bikes and docks using hierarchical clustering method. Results demonstrated the modeled over-demand patterns in Chicago. This study contributes to offer better knowledge of biking flow patterns, which was difficult to obtain using traditional methods. Given the trend of increasing popularity of the BSS and data openness in different cities, methods used in this study can extend to examine the biking patterns and BSS functionality in different cities.

  6. Understanding Spatiotemporal Patterns of Biking Behavior by Analyzing Massive Bike Sharing Data in Chicago.

    Science.gov (United States)

    Zhou, Xiaolu

    2015-01-01

    The growing number of bike sharing systems (BSS) in many cities largely facilitates biking for transportation and recreation. Most recent bike sharing systems produce time and location specific data, which enables the study of travel behavior and mobility of each individual. However, despite a rapid growth of interest, studies on massive bike sharing data and the underneath travel pattern are still limited. Few studies have explored and visualized spatiotemporal patterns of bike sharing behavior using flow clustering, nor examined the station functional profiles based on over-demand patterns. This study investigated the spatiotemporal biking pattern in Chicago by analyzing massive BSS data from July to December in 2013 and 2014. The BSS in Chicago gained more popularity. About 15.9% more people subscribed to this service. Specifically, we constructed bike flow similarity graph and used fastgreedy algorithm to detect spatial communities of biking flows. By using the proposed methods, we discovered unique travel patterns on weekdays and weekends as well as different travel trends for customers and subscribers from the noisy massive amount data. In addition, we also examined the temporal demands for bikes and docks using hierarchical clustering method. Results demonstrated the modeled over-demand patterns in Chicago. This study contributes to offer better knowledge of biking flow patterns, which was difficult to obtain using traditional methods. Given the trend of increasing popularity of the BSS and data openness in different cities, methods used in this study can extend to examine the biking patterns and BSS functionality in different cities.

  7. An investigation on thermal patterns in Iran based on spatial autocorrelation

    Science.gov (United States)

    Fallah Ghalhari, Gholamabbas; Dadashi Roudbari, Abbasali

    2018-02-01

    The present study aimed at investigating temporal-spatial patterns and monthly patterns of temperature in Iran using new spatial statistical methods such as cluster and outlier analysis, and hotspot analysis. To do so, climatic parameters, monthly average temperature of 122 synoptic stations, were assessed. Statistical analysis showed that January with 120.75% had the most fluctuation among the studied months. Global Moran's Index revealed that yearly changes of temperature in Iran followed a strong spatially clustered pattern. Findings showed that the biggest thermal cluster pattern in Iran, 0.975388, occurred in May. Cluster and outlier analyses showed that thermal homogeneity in Iran decreases in cold months, while it increases in warm months. This is due to the radiation angle and synoptic systems which strongly influence thermal order in Iran. The elevations, however, have the most notable part proved by Geographically weighted regression model. Iran's thermal analysis through hotspot showed that hot thermal patterns (very hot, hot, and semi-hot) were dominant in the South, covering an area of 33.5% (about 552,145.3 km2). Regions such as mountain foot and low lands lack any significant spatial autocorrelation, 25.2% covering about 415,345.1 km2. The last is the cold thermal area (very cold, cold, and semi-cold) with about 25.2% covering about 552,145.3 km2 of the whole area of Iran.

  8. The influence of sampling unit size and spatial arrangement patterns on neighborhood-based spatial structure analyses of forest stands

    Energy Technology Data Exchange (ETDEWEB)

    Wang, H.; Zhang, G.; Hui, G.; Li, Y.; Hu, Y.; Zhao, Z.

    2016-07-01

    Aim of study: Neighborhood-based stand spatial structure parameters can quantify and characterize forest spatial structure effectively. How these neighborhood-based structure parameters are influenced by the selection of different numbers of nearest-neighbor trees is unclear, and there is some disagreement in the literature regarding the appropriate number of nearest-neighbor trees to sample around reference trees. Understanding how to efficiently characterize forest structure is critical for forest management. Area of study: Multi-species uneven-aged forests of Northern China. Material and methods: We simulated stands with different spatial structural characteristics and systematically compared their structure parameters when two to eight neighboring trees were selected. Main results: Results showed that values of uniform angle index calculated in the same stand were different with different sizes of structure unit. When tree species and sizes were completely randomly interspersed, different numbers of neighbors had little influence on mingling and dominance indices. Changes of mingling or dominance indices caused by different numbers of neighbors occurred when the tree species or size classes were not randomly interspersed and their changing characteristics can be detected according to the spatial arrangement patterns of tree species and sizes. Research highlights: The number of neighboring trees selected for analyzing stand spatial structure parameters should be fixed. We proposed that the four-tree structure unit is the best compromise between sampling accuracy and costs for practical forest management. (Author)

  9. Wavenumber locking and pattern formation in spatially forced systems

    International Nuclear Information System (INIS)

    Manor, Rotem; Meron, Ehud; Hagberg, Aric

    2009-01-01

    We study wavenumber locking and pattern formation resulting from weak spatially periodic one-dimensional forcing of two-dimensional systems. We consider systems that produce stationary or traveling stripe patterns when unforced and apply forcing aligned with the stripes. Forcing at close to twice the pattern wavenumber selects, stabilizes, or creates resonant stripes locked at half the forcing wavenumber. If the mismatch between the forcing and pattern wavenumber is high we find that the pattern still locks but develops a wave vector component perpendicular to the forcing direction and forms rectangular and oblique patterns. When the unforced system supports traveling waves, resonant rectangular patterns remain stationary but oblique patterns travel in a direction orthogonal to the traveling waves.

  10. Investigating Spatial Patterns of Persistent Scatterer Interferometry Point Targets and Landslide Occurrences in the Arno River Basin

    Directory of Open Access Journals (Sweden)

    Ping Lu

    2014-07-01

    Full Text Available Persistent Scatterer Interferometry (PSI has been widely used for landslide studies in recent years. This paper investigated the spatial patterns of PSI point targets and landslide occurrences in the Arno River basin in Central Italy. The main purpose is to analyze whether spatial patterns of Persistent Scatterers (PS can be recognized as indicators of landslide occurrences throughout the whole basin. The bivariate K-function was employed to assess spatial relationships between PS and landslides. The PSI point targets were acquired from almost 4 years (from March 2003 to January 2007 of RADARSAT-1 images. The landslide inventory was collected from 15 years (from 1992–2007 of surveying and mapping data, mainly including remote sensing data, topographic maps and field investigations. The proposed approach is able to assess spatial patterns between a variety of PS and landslides, in particular, to understand if PSI point targets are spatially clustered (spatial attraction or randomly distributed (spatial independency on various types of landslides across the basin. Additionally, the degree and scale distances of PS clustering on a variety of landslides can be characterized. The results rejected the null hypothesis that PSI point targets appear to cluster similarly on four types of landslides (slides, flows, falls and creeps in the Arno River basin. Significant influence of PS velocities and acquisition orbits can be noticed on detecting landslides with different states of activities. Despite that the assessment may be influenced by the quality of landslide inventory and Synthetic Aperture Radar (SAR images, the proposed approach is expected to provide guidelines for studies trying to detect and investigate landslide occurrences at a regional scale through spatial statistical analysis of PS, for which an advanced understanding of the impact of scale distances on landslide clustering is fundamentally needed.

  11. Combining satellite data and appropriate objective functions for improved spatial pattern performance of a distributed hydrologic model

    Science.gov (United States)

    Demirel, Mehmet C.; Mai, Juliane; Mendiguren, Gorka; Koch, Julian; Samaniego, Luis; Stisen, Simon

    2018-02-01

    Satellite-based earth observations offer great opportunities to improve spatial model predictions by means of spatial-pattern-oriented model evaluations. In this study, observed spatial patterns of actual evapotranspiration (AET) are utilised for spatial model calibration tailored to target the pattern performance of the model. The proposed calibration framework combines temporally aggregated observed spatial patterns with a new spatial performance metric and a flexible spatial parameterisation scheme. The mesoscale hydrologic model (mHM) is used to simulate streamflow and AET and has been selected due to its soil parameter distribution approach based on pedo-transfer functions and the build in multi-scale parameter regionalisation. In addition two new spatial parameter distribution options have been incorporated in the model in order to increase the flexibility of root fraction coefficient and potential evapotranspiration correction parameterisations, based on soil type and vegetation density. These parameterisations are utilised as they are most relevant for simulated AET patterns from the hydrologic model. Due to the fundamental challenges encountered when evaluating spatial pattern performance using standard metrics, we developed a simple but highly discriminative spatial metric, i.e. one comprised of three easily interpretable components measuring co-location, variation and distribution of the spatial data. The study shows that with flexible spatial model parameterisation used in combination with the appropriate objective functions, the simulated spatial patterns of actual evapotranspiration become substantially more similar to the satellite-based estimates. Overall 26 parameters are identified for calibration through a sequential screening approach based on a combination of streamflow and spatial pattern metrics. The robustness of the calibrations is tested using an ensemble of nine calibrations based on different seed numbers using the shuffled complex

  12. Spatial Patterns of Ischemic Heart Disease in Shenzhen, China: A Bayesian Multi-Disease Modelling Approach to Inform Health Planning Policies.

    Science.gov (United States)

    Du, Qingyun; Zhang, Mingxiao; Li, Yayan; Luan, Hui; Liang, Shi; Ren, Fu

    2016-04-20

    Incorporating the information of hypertension, this paper applies Bayesian multi-disease analysis to model the spatial patterns of Ischemic Heart Disease (IHD) risks. Patterns of harmful alcohol intake (HAI) and overweight/obesity are also modelled as they are common risk factors contributing to both IHD and hypertension. The hospitalization data of IHD and hypertension in 2012 were analyzed with three Bayesian multi-disease models at the sub-district level of Shenzhen. Results revealed that the IHD high-risk cluster shifted slightly north-eastward compared with the IHD Standardized Hospitalization Ratio (SHR). Spatial variations of overweight/obesity and HAI were found to contribute most to the IHD patterns. Identified patterns of IHD risk would benefit IHD integrated prevention. Spatial patterns of overweight/obesity and HAI could supplement the current disease surveillance system by providing information about small-area level risk factors, and thus benefit integrated prevention of related chronic diseases. Middle southern Shenzhen, where high risk of IHD, overweight/obesity, and HAI are present, should be prioritized for interventions, including alcohol control, innovative healthy diet toolkit distribution, insurance system revision, and community-based chronic disease intervention. Related health resource planning is also suggested to focus on these areas first.

  13. Calibration of a distributed hydrologic model using observed spatial patterns from MODIS data

    Science.gov (United States)

    Demirel, Mehmet C.; González, Gorka M.; Mai, Juliane; Stisen, Simon

    2016-04-01

    Distributed hydrologic models are typically calibrated against streamflow observations at the outlet of the basin. Along with these observations from gauging stations, satellite based estimates offer independent evaluation data such as remotely sensed actual evapotranspiration (aET) and land surface temperature. The primary objective of the study is to compare model calibrations against traditional downstream discharge measurements with calibrations against simulated spatial patterns and combinations of both types of observations. While the discharge based model calibration typically improves the temporal dynamics of the model, it seems to give rise to minimum improvement of the simulated spatial patterns. In contrast, objective functions specifically targeting the spatial pattern performance could potentially increase the spatial model performance. However, most modeling studies, including the model formulations and parameterization, are not designed to actually change the simulated spatial pattern during calibration. This study investigates the potential benefits of incorporating spatial patterns from MODIS data to calibrate the mesoscale hydrologic model (mHM). This model is selected as it allows for a change in the spatial distribution of key soil parameters through the optimization of pedo-transfer function parameters and includes options for using fully distributed daily Leaf Area Index (LAI) values directly as input. In addition the simulated aET can be estimated at a spatial resolution suitable for comparison to the spatial patterns observed with MODIS data. To increase our control on spatial calibration we introduced three additional parameters to the model. These new parameters are part of an empirical equation to the calculate crop coefficient (Kc) from daily LAI maps and used to update potential evapotranspiration (PET) as model inputs. This is done instead of correcting/updating PET with just a uniform (or aspect driven) factor used in the mHM model

  14. Spatial Point Pattern Analysis of Human Settlements and Geographical Associations in Eastern Coastal China — A Case Study

    Science.gov (United States)

    Zhang, Zhonghao; Xiao, Rui; Shortridge, Ashton; Wu, Jiaping

    2014-01-01

    Understanding the spatial point pattern of human settlements and their geographical associations are important for understanding the drivers of land use and land cover change and the relationship between environmental and ecological processes on one hand and cultures and lifestyles on the other. In this study, a Geographic Information System (GIS) approach, Ripley’s K function and Monte Carlo simulation were used to investigate human settlement point patterns. Remotely sensed tools and regression models were employed to identify the effects of geographical determinants on settlement locations in the Wen-Tai region of eastern coastal China. Results indicated that human settlements displayed regular-random-cluster patterns from small to big scale. Most settlements located on the coastal plain presented either regular or random patterns, while those in hilly areas exhibited a clustered pattern. Moreover, clustered settlements were preferentially located at higher elevations with steeper slopes and south facing aspects than random or regular settlements. Regression showed that influences of topographic factors (elevation, slope and aspect) on settlement locations were stronger across hilly regions. This study demonstrated a new approach to analyzing the spatial patterns of human settlements from a wide geographical prospective. We argue that the spatial point patterns of settlements, in addition to the characteristics of human settlements, such as area, density and shape, should be taken into consideration in the future, and land planners and decision makers should pay more attention to city planning and management. Conceptual and methodological bridges linking settlement patterns to regional and site-specific geographical characteristics will be a key to human settlement studies and planning. PMID:24619117

  15. Environmental controls on multiscale spatial patterns of salt marsh vegetation

    DEFF Research Database (Denmark)

    Kim, Daehyun; Cairns, David; Bartholdy, Jesper

    2010-01-01

    In coastal environments, biogeographic patterns are generally influenced by surface elevation and horizontal distance from sea water. However, it is still unclear whether these major topographic factors are significant controls of vegetation patterns across spatial scales at which different physi...

  16. Combining satellite data and appropriate objective functions for improved spatial pattern performance of a distributed hydrologic model

    Directory of Open Access Journals (Sweden)

    M. C. Demirel

    2018-02-01

    Full Text Available Satellite-based earth observations offer great opportunities to improve spatial model predictions by means of spatial-pattern-oriented model evaluations. In this study, observed spatial patterns of actual evapotranspiration (AET are utilised for spatial model calibration tailored to target the pattern performance of the model. The proposed calibration framework combines temporally aggregated observed spatial patterns with a new spatial performance metric and a flexible spatial parameterisation scheme. The mesoscale hydrologic model (mHM is used to simulate streamflow and AET and has been selected due to its soil parameter distribution approach based on pedo-transfer functions and the build in multi-scale parameter regionalisation. In addition two new spatial parameter distribution options have been incorporated in the model in order to increase the flexibility of root fraction coefficient and potential evapotranspiration correction parameterisations, based on soil type and vegetation density. These parameterisations are utilised as they are most relevant for simulated AET patterns from the hydrologic model. Due to the fundamental challenges encountered when evaluating spatial pattern performance using standard metrics, we developed a simple but highly discriminative spatial metric, i.e. one comprised of three easily interpretable components measuring co-location, variation and distribution of the spatial data. The study shows that with flexible spatial model parameterisation used in combination with the appropriate objective functions, the simulated spatial patterns of actual evapotranspiration become substantially more similar to the satellite-based estimates. Overall 26 parameters are identified for calibration through a sequential screening approach based on a combination of streamflow and spatial pattern metrics. The robustness of the calibrations is tested using an ensemble of nine calibrations based on different seed numbers using the

  17. Spatial pattern recognition of seismic events in South West Colombia

    Science.gov (United States)

    Benítez, Hernán D.; Flórez, Juan F.; Duque, Diana P.; Benavides, Alberto; Lucía Baquero, Olga; Quintero, Jiber

    2013-09-01

    Recognition of seismogenic zones in geographical regions supports seismic hazard studies. This recognition is usually based on visual, qualitative and subjective analysis of data. Spatial pattern recognition provides a well founded means to obtain relevant information from large amounts of data. The purpose of this work is to identify and classify spatial patterns in instrumental data of the South West Colombian seismic database. In this research, clustering tendency analysis validates whether seismic database possesses a clustering structure. A non-supervised fuzzy clustering algorithm creates groups of seismic events. Given the sensitivity of fuzzy clustering algorithms to centroid initial positions, we proposed a methodology to initialize centroids that generates stable partitions with respect to centroid initialization. As a result of this work, a public software tool provides the user with the routines developed for clustering methodology. The analysis of the seismogenic zones obtained reveals meaningful spatial patterns in South-West Colombia. The clustering analysis provides a quantitative location and dispersion of seismogenic zones that facilitates seismological interpretations of seismic activities in South West Colombia.

  18. Spatial distribution patterns of soil mite communities and their relationships with edaphic factors in a 30-year tillage cornfield in northeast China.

    Science.gov (United States)

    Liu, Jie; Gao, Meixiang; Liu, Jinwen; Guo, Yuxi; Liu, Dong; Zhu, Xinyu; Wu, Donghui

    2018-01-01

    Spatial distribution is an important topic in community ecology and a key to understanding the structure and dynamics of populations and communities. However, the available information related to the spatial patterns of soil mite communities in long-term tillage agroecosystems remains insufficient. In this study, we examined the spatial patterns of soil mite communities to explain the spatial relationships between soil mite communities and soil parameters. Soil fauna were sampled three times (August, September and October 2015) at 121 locations arranged regularly within a 400 m × 400 m monitoring plot. Additionally, we estimated the physical and chemical parameters of the same sampling locations. The distribution patterns of the soil mite community and the edaphic parameters were analyzed using a range of geostatistical tools. Moran's I coefficient showed that, during each sampling period, the total abundance of the soil mite communities and the abundance of the dominant mite populations were spatially autocorrelated. The soil mite communities demonstrated clear patchy distribution patterns within the study plot. These patterns were sampling period-specific. Cross-semivariograms showed both negative and positive cross-correlations between soil mite communities and environmental factors. Mantel tests showed a significant and positive relationship between soil mite community and soil organic matter and soil pH only in August. This study demonstrated that in the cornfield, the soil mite distribution exhibited strong or moderate spatial dependence, and the mites formed patches with sizes less than one hundred meters. In addition, in this long-term tillage agroecosystem, soil factors had less influence on the observed pattern of soil mite communities. Further experiments that take into account human activity and spatial factors should be performed to study the factors that drive the spatial distribution of soil microarthropods.

  19. Spatial pattern formation induced by Gaussian white noise.

    Science.gov (United States)

    Scarsoglio, Stefania; Laio, Francesco; D'Odorico, Paolo; Ridolfi, Luca

    2011-02-01

    The ability of Gaussian noise to induce ordered states in dynamical systems is here presented in an overview of the main stochastic mechanisms able to generate spatial patterns. These mechanisms involve: (i) a deterministic local dynamics term, accounting for the local rate of variation of the field variable, (ii) a noise component (additive or multiplicative) accounting for the unavoidable environmental disturbances, and (iii) a linear spatial coupling component, which provides spatial coherence and takes into account diffusion mechanisms. We investigate these dynamics using analytical tools, such as mean-field theory, linear stability analysis and structure function analysis, and use numerical simulations to confirm these analytical results. Copyright © 2010 Elsevier Inc. All rights reserved.

  20. Analyzing Local Spatio-Temporal Patterns of Police Calls-for-Service Using Bayesian Integrated Nested Laplace Approximation

    Directory of Open Access Journals (Sweden)

    Hui Luan

    2016-09-01

    Full Text Available This research investigates spatio-temporal patterns of police calls-for-service in the Region of Waterloo, Canada, at a fine spatial and temporal resolution. Modeling was implemented via Bayesian Integrated Nested Laplace Approximation (INLA. Temporal patterns for two-hour time periods, spatial patterns at the small-area scale, and space-time interaction (i.e., unusual departures from overall spatial and temporal patterns were estimated. Temporally, calls-for-service were found to be lowest in the early morning (02:00–03:59 and highest in the evening (20:00–21:59, while high levels of calls-for-service were spatially located in central business areas and in areas characterized by major roadways, universities, and shopping centres. Space-time interaction was observed to be geographically dispersed during daytime hours but concentrated in central business areas during evening hours. Interpreted through the routine activity theory, results are discussed with respect to law enforcement resource demand and allocation, and the advantages of modeling spatio-temporal datasets with Bayesian INLA methods are highlighted.

  1. Combining satellite data and appropriate objective functions for improved spatial pattern performance of a distributed hydrologic model

    DEFF Research Database (Denmark)

    Demirel, Mehmet C.; Mai, Juliane; Mendiguren Gonzalez, Gorka

    2018-01-01

    Satellite-based earth observations offer great opportunities to improve spatial model predictions by means of spatial-pattern-oriented model evaluations. In this study, observed spatial patterns of actual evapotranspiration (AET) are utilised for spatial model calibration tailored to target...... and potential evapotranspiration correction parameterisations, based on soil type and vegetation density. These parameterisations are utilised as they are most relevant for simulated AET patterns from the hydrologic model. Due to the fundamental challenges encountered when evaluating spatial pattern performance...

  2. Voronoi tessellations and the cosmic web : Spatial patterns and clustering across the universe

    NARCIS (Netherlands)

    van de Weygaert, Rien; Gold, CM

    2007-01-01

    The spatial cosmic matter distribution on scales of a few up to more than a hundred Megaparsec(1) displays a salient and pervasive foamlike pattern. Voronoi tessellations are a versatile and flexible mathematical model for such weblike spatial patterns. They would be the natural result of an

  3. Spatial Point Pattern Analysis of Human Settlements and Geographical Associations in Eastern Coastal China — A Case Study

    Directory of Open Access Journals (Sweden)

    Zhonghao Zhang

    2014-03-01

    Full Text Available Understanding the spatial point pattern of human settlements and their geographical associations are important for understanding the drivers of land use and land cover change and the relationship between environmental and ecological processes on one hand and cultures and lifestyles on the other. In this study, a Geographic Information System (GIS approach, Ripley’s K function and Monte Carlo simulation were used to investigate human settlement point patterns. Remotely sensed tools and regression models were employed to identify the effects of geographical determinants on settlement locations in the Wen-Tai region of eastern coastal China. Results indicated that human settlements displayed regular-random-cluster patterns from small to big scale. Most settlements located on the coastal plain presented either regular or random patterns, while those in hilly areas exhibited a clustered pattern. Moreover, clustered settlements were preferentially located at higher elevations with steeper slopes and south facing aspects than random or regular settlements. Regression showed that influences of topographic factors (elevation, slope and aspect on settlement locations were stronger across hilly regions. This study demonstrated a new approach to analyzing the spatial patterns of human settlements from a wide geographical prospective. We argue that the spatial point patterns of settlements, in addition to the characteristics of human settlements, such as area, density and shape, should be taken into consideration in the future, and land planners and decision makers should pay more attention to city planning and management. Conceptual and methodological bridges linking settlement patterns to regional and site-specific geographical characteristics will be a key to human settlement studies and planning.

  4. Pattern and spatial distribution of plague in Lushoto, north-eastern ...

    African Journals Online (AJOL)

    A review of plague records from 1986 to 2002 and household interviews were carried out in the plague endemic villages to establish a pattern and spatial distribution of the disease in Lushoto district, Tanzania. Spatial data of households and village centres were collected and mapped using a hand held Global Positioning ...

  5. Spatial pattern formation and intraspecific competition of anabasis aphylla l. population in the diluvial fan of junggar basin, nw china

    International Nuclear Information System (INIS)

    Wang, M.; Li, Y.Y.; Niu, P.X.

    2015-01-01

    Using conventional nearest neighbour analysis and Ripley's L-function, the goal of this study was to analyze spatial patterns of Anabasis aphylla plants in order to investigate underlying competitive processes that shape the population spatial structure from diluvial fan in Junggar Basin, NW China. We found that the spatial patterns of all growth stages were aggregated in the three study plots, and seedling and juvenile plants were more aggregated than expected by chance. Positive associations among growth stages of A. aphylla population were found at a small scale while negative associations of seedling and juvenile relative to adult plants were shown at a larger scale. The processes such as dispersal, seedling establishment, environmental heterogeneity, plant interactions and disturbance may have acted individually or in concert with other processes to produce the aggregated patterns and competitive relationship. Moreover, these findings suggested that the aggregated distribution and the competitive interaction between A. aphylla plants in the diluvial fan reflected not only in mortality, but also in decreased performance (smaller canopy) that was an important characteristic of drought-enduring plant, thus preventing a regular distribution pattern. (author)

  6. Demographic change in Germany and reversal of spatial ageing patterns

    Directory of Open Access Journals (Sweden)

    Swiaczny Frank

    2010-12-01

    Full Text Available The paper presents the result of a spatial analysis considering the effect of demographic ageing and ageing-in-place processes in Germany according to spatially differentiated ageing patterns among urban, sub-urban and rural counties up to 2025. As to the latest official population forecast counties of urban core regions will undergo a slower ageing process than other types of counties, resulting in a reversal of ageing patterns. Urban core areas in this analysis will gain demographically from their net migration surplus while suburban housing locations of the past will be no longer able to attract enough young migrants to compensate for their now rapidly ageing baby boomer generation. The process presented is typical for the fate of (suburban housing areas with homogenous populations under conditions of ageing and shrinking if spatial mobility in ageing population groups is declining.

  7. Demographic change in Germany and reversal of spatial ageing patterns

    Directory of Open Access Journals (Sweden)

    Swiaczny F.

    2010-01-01

    Full Text Available The paper presents the result of a spatial analysis considering the effect of demographic ageing and ageing-in-place processes in Germany according to spatially differentiated ageing patterns among urban, sub-urban and rural counties up to 2025. As to the latest official population forecast counties of urban core regions will undergo a slower ageing process than other types of counties, resulting in a reversal of ageing patterns. Urban core areas in this analysis will gain demographically from their net migration surplus while suburban housing locations of the past will be no longer able to attract enough young migrants to compensate for their now rapidly ageing baby boomer generation. The process presented is typical for the fate of (suburban housing areas with homogenous populations under conditions of ageing and shrinking if spatial mobility in ageing population groups is declining.

  8. Spatial Patterns of Ischemic Heart Disease in Shenzhen, China: A Bayesian Multi-Disease Modelling Approach to Inform Health Planning Policies

    Directory of Open Access Journals (Sweden)

    Qingyun Du

    2016-04-01

    Full Text Available Incorporating the information of hypertension, this paper applies Bayesian multi-disease analysis to model the spatial patterns of Ischemic Heart Disease (IHD risks. Patterns of harmful alcohol intake (HAI and overweight/obesity are also modelled as they are common risk factors contributing to both IHD and hypertension. The hospitalization data of IHD and hypertension in 2012 were analyzed with three Bayesian multi-disease models at the sub-district level of Shenzhen. Results revealed that the IHD high-risk cluster shifted slightly north-eastward compared with the IHD Standardized Hospitalization Ratio (SHR. Spatial variations of overweight/obesity and HAI were found to contribute most to the IHD patterns. Identified patterns of IHD risk would benefit IHD integrated prevention. Spatial patterns of overweight/obesity and HAI could supplement the current disease surveillance system by providing information about small-area level risk factors, and thus benefit integrated prevention of related chronic diseases. Middle southern Shenzhen, where high risk of IHD, overweight/obesity, and HAI are present, should be prioritized for interventions, including alcohol control, innovative healthy diet toolkit distribution, insurance system revision, and community-based chronic disease intervention. Related health resource planning is also suggested to focus on these areas first.

  9. Spatial patterns of cyanobacterial mat growth on sand ripples

    Science.gov (United States)

    Mariotti, G.; Klepac-Ceraj, V.; Perron, J. T.; Bosak, T.

    2016-02-01

    Photosynthetic microbial mats produce organic matter, cycle nutrients, bind pollutants and stabilize sediment in sandy marine environments. Here, we investigate the influence of bedforms and wave motion on the growth rate, composition and spatial variability of microbial mats by growing cyanobacterial mats on a rippled bed of carbonate sand in a wave tank. The tank was forced with an oscillatory flow with velocities below the threshold for sediment motion yet able to induce a porewater flow within the sediment. Different spatial patterns developed in mats depending on the initial biochemistry of the water medium. When growing in a medium rich in nitrogen, phosphorous and micronutrients, mats grew faster on ripple troughs than on ripple crests. After two months, mats covered the bed surface uniformly, and the microbial communities on the crests and in the troughs had similar compositions. Differences in bed shear stress and nutrient availability between crests and troughs were not able to explain the faster growth in the troughs. We hypothesize that this growth pattern is due to a "strainer" effect, i.e. the suspended bacteria from the inoculum were preferentially delivered to troughs by the wave-induced porewater flow. In the experiments initiated in a medium previously used up by a microbial mat and thus depleted in nutrients, mats grew preferentially on the ripple crests. This spatial pattern persisted for nearly two years, and the microbial composition on troughs and crests was different. We attribute this pattern to the upwelling of porewater in the crests, which increased the delivery of nutrients from sediment to the cyanobacteria on the bed surface. Thus, the macroscopic patterns formed by photosynthetic microbial mats on sand ripples may be used to infer whether mats are nutrient-limited and whether they are recently colonized or older than a month.

  10. Spatial patterns of throughfall isotopic composition at the event and seasonal timescales

    Science.gov (United States)

    Allen, Scott T.; Keim, Richard F.; McDonnell, Jeffrey J.

    2015-03-01

    Spatial variability of throughfall isotopic composition in forests is indicative of complex processes occurring in the canopy and remains insufficiently understood to properly characterize precipitation inputs to the catchment water balance. Here we investigate variability of throughfall isotopic composition with the objectives: (1) to quantify the spatial variability in event-scale samples, (2) to determine if there are persistent controls over the variability and how these affect variability of seasonally accumulated throughfall, and (3) to analyze the distribution of measured throughfall isotopic composition associated with varying sampling regimes. We measured throughfall over two, three-month periods in western Oregon, USA under a Douglas-fir canopy. The mean spatial range of δ18O for each event was 1.6‰ and 1.2‰ through Fall 2009 (11 events) and Spring 2010 (7 events), respectively. However, the spatial pattern of isotopic composition was not temporally stable causing season-total throughfall to be less variable than event throughfall (1.0‰; range of cumulative δ18O for Fall 2009). Isotopic composition was not spatially autocorrelated and not explained by location relative to tree stems. Sampling error analysis for both field measurements and Monte-Carlo simulated datasets representing different sampling schemes revealed the standard deviation of differences from the true mean as high as 0.45‰ (δ18O) and 1.29‰ (d-excess). The magnitude of this isotopic variation suggests that small sample sizes are a source of substantial experimental error.

  11. Temporal and spatial patterns of micropollutants in urban receiving waters

    Energy Technology Data Exchange (ETDEWEB)

    Musolff, Andreas, E-mail: andreas.musolff@ufz.d [UFZ - Helmholtz Centre for Environmental Research, Department of Hydrogeology, Permoserstr. 15, 04318 Leipzig (Germany); Leschik, Sebastian, E-mail: sebastian.leschik@ufz.d [UFZ - Helmholtz Centre for Environmental Research, Department of Hydrogeology, Permoserstr. 15, 04318 Leipzig (Germany); Moeder, Monika, E-mail: monika.moeder@ufz.d [UFZ - Helmholtz Centre for Environmental Research, Department of Analytical Chemistry, Permoserstr. 15, 04318 Leipzig (Germany); Strauch, Gerhard, E-mail: gerhard.strauch@ufz.d [UFZ - Helmholtz Centre for Environmental Research, Department of Hydrogeology, Permoserstr. 15, 04318 Leipzig (Germany); Reinstorf, Frido, E-mail: frido.reinstorf@hs-magdeburg.d [University of Applied Sciences Magdeburg-Stendal, Department of Water and Waste Management, Breitscheidstr. 2, 39114 Magdeburg (Germany); Schirmer, Mario, E-mail: mario.schirmer@eawag.c [Eawag, The Swiss Federal Institute of Aquatic Science and Technology, Department of Water Resources and Drinking Water, Ueberlandstr. 133, 8600 Duebendorf (Switzerland)

    2009-11-15

    Based on a monitoring program over the course of a year, we characterize the temporal and spatial distribution of selected micropollutants in an urban watershed within the city of Leipzig, Germany. Micropollutants revealed a ubiquitous presence in untreated and treated wastewater, surface water and groundwater. The loads of 4-nonylphenol in the effluents of the municipal wastewater treatment plant followed a seasonal trend, whereas the loads of all other micropollutants were highly variable and not correlated to seasons. In the surface water, load seasonality of caffeine, galaxolide and tonalide resulted from a rapid removal with increased water temperature. The loads of 4-nonylphenol and of caffeine in the colder months increased when rainfall occurred. In the groundwater, complex spatial and temporal patterns were apparent and were related to varying input, retardation and removal processes. As a consequence, an assessment of micropollutants in urban waters should consider different micropollutants' temporal and spatial variability. - Micropollutants in urban receiving waters are characterized by variable temporal and spatial concentration and load patterns that have to be considered in risk assessments.

  12. Basic Characteristics and Spatial Patterns of Pseudo-Settlements--Taking Dalian as An Example.

    Science.gov (United States)

    Gao, Jiaji; Zhang, Yingjia; Li, Xueming

    2016-01-20

    A person's living behavior patterns are closely related to three types of settlements: real-life settlements, imagined settlements, and pseudo-settlements. The term "pseudo-settlement" (PS) refers to the places that are selectively recorded and represented after the mass media chose and restructure the residence information. As the mass media rapidly develops and people's way of obtaining information gradually change, PS has already become one of the main ways for people to recognize and understand real-life settlements, as well as describe their impressions of imagined settlements. PS also has a profound impact on tourism, employment, investment, migration, real estate development, etc. Thus, the study of PSs has important theoretical and practical significance. This paper proposes to put forward residential quarters where the mass media is displayed as the object of study and establishes the pseudo-settlement index system of Dalian in and elaborate analysis of the concept of PSs. From three aspects, including pseudo-buildings, pseudo-districts and pseudo-culture, this paper uses the ArcGIS 10.0 kernel density (spacial analyst) to analyze and interpret the basic characteristics and spatial patterns of 14 elements of the PS in Dalian. Through systemic clustering analysis, it identifies eight major types of PSs in Dalian. Then it systematically elaborates current situations and characteristics of the spatial pattern of PSs in Dalian, namely: regionally concentrated, widely scattered and blank spaces without pseudo-settlements. Finally, this paper discusses the mechanism of formation of PSs in Dalian.

  13. Design patterns for instructional materials that foster proficiency at analyzing and interpreting complex geoscience data

    Science.gov (United States)

    Kastens, K. A.; Krumhansl, R.

    2016-12-01

    The Next Generation Science Standards incorporate a stronger emphasis on having students work with data than did prior standards. This emphasis is most obvious in Practice 4: Analyzing and Interpreting Data, but also permeates performance expectations built on Practice 2 when students test models, Practice 6 when students construct explanations, and Practice 7 when student test claims with evidence. To support curriculum developers who wish to guide high school students towards more sophisticated engagement with complex data, we analyzed a well-regarded body of instructional materials designed for use in introductory college courses (http://serc.carleton.edu/integrate/teaching_materials/). Our analysis sought design patterns that can be reused for a variety of topics at the high school or college level. We found five such patterns, each of which was used in at least half of the modules analyzed. We describe each pattern, provide an example, and hypothesize a theory of action that could explain how the sequence of activities leverages known perceptual, cognitive and/or social processes to foster learning from and about data. In order from most to least frequent, the observed design patterns are as follows: In Data Puzzles, students respond to guiding questions about high-value snippets of data pre-selected and sequenced by the curriculum developer to lead to an Aha! inference. In Pooling Data to See the Big Picture, small groups analyze different instances of analogous phenomenon (e.g. different hurricanes, or different divergent plate boundaries) and pool their insights to extract the commonalities that constitute the essence of that phenomenon. In Make a Decision or Recommendation, students combine geoscience data with other factors (such as economic or environmental justice concerns) to make a decision or recommendation about a human or societal action. In Predict-Observe-Explain, students make a prediction about what the Earth will look like under conditions

  14. Post-fire spatial patterns of soil nitrogen mineralization and microbial abundance.

    Directory of Open Access Journals (Sweden)

    Erica A H Smithwick

    Full Text Available Stand-replacing fires influence soil nitrogen availability and microbial community composition, which may in turn mediate post-fire successional dynamics and nutrient cycling. However, fires create patchiness at both local and landscape scales and do not result in consistent patterns of ecological dynamics. The objectives of this study were to (1 quantify the spatial structure of microbial communities in forest stands recently affected by stand-replacing fire and (2 determine whether microbial variables aid predictions of in situ net nitrogen mineralization rates in recently burned stands. The study was conducted in lodgepole pine (Pinus contorta var. latifolia and Engelmann spruce/subalpine fir (Picea engelmannii/Abies lasiocarpa forest stands that burned during summer 2000 in Greater Yellowstone (Wyoming, USA. Using a fully probabilistic spatial process model and Bayesian kriging, the spatial structure of microbial lipid abundance and fungi-to-bacteria ratios were found to be spatially structured within plots two years following fire (for most plots, autocorrelation range varied from 1.5 to 10.5 m. Congruence of spatial patterns among microbial variables, in situ net N mineralization, and cover variables was evident. Stepwise regression resulted in significant models of in situ net N mineralization and included variables describing fungal and bacterial abundance, although explained variance was low (R²<0.29. Unraveling complex spatial patterns of nutrient cycling and the biotic factors that regulate it remains challenging but is critical for explaining post-fire ecosystem function, especially in Greater Yellowstone, which is projected to experience increased fire frequencies by mid 21(st Century.

  15. Spatial patterns of hydro-social metrics in the Northeastern United States from the Colonial Era through the Industrial Revolution (1600-1920)

    Science.gov (United States)

    Witherell, B. B.; Bain, D. J.; Salant, N.; Aloysius, N. R.

    2009-12-01

    Humans impact the hydrologic cycle at local, regional and global scales. Understanding how spatial patterns of human water use and hydrologic impact have changed over time is important to future water management in an era of increasing water constraints and globalization of high water-use resources. This study investigates spatial dependence and spatial patterns of hydro-social metrics for the Northeastern United States from 1600 to 1920 through the use of spatial statistical techniques. Several relevant hydro-social metrics, including water residence time, surface water storage (natural and human engineered) and per capita water availability, are analyzed. This study covers a region and period of time that saw significant population growth, landscape change, and industrial growth. These changes had important impacts on water availability. Although some changes such as the elimination of beavers, and the resulting loss of beaver ponds on low-order streams, are felt at a regional scale, preliminary analysis indicates that humans responded to water constraints by acting locally (e.g., mill ponds for water power and water supply reservoirs for public health). This 320-year historical analysis of spatial patterns of hydro-social metrics provides unique insight into long-term changes in coupled human-water systems.

  16. Spatial patterns of encroaching shrub species under different ...

    African Journals Online (AJOL)

    ... in Middelburg (Eastern Cape, South Africa) coexist and partition space under different grazing regimes (viz. continuous rest, and continuous, summer and winter grazing). We used point-pattern analysis to assess the spatial ecology of these species. We also used an index of integration (mingling index), where low values ...

  17. "Chess-board pattern" spatial modulation of magnetization. Assessment of myocardial function

    DEFF Research Database (Denmark)

    Thomsen, C

    1992-01-01

    . Through spatial modulation of the magnetization the entire image can be labeled in different patterns. Two new pulse sequences are presented, giving a chess-board like spatial modulation. These pulse sequences have several advantages compared with the previously published methods, as the modulation time...... is half that required to obtain a 2-dimensional grid, the area in the image with high signal intensity was significantly larger, and the radiofrequency power deposition was substantially decreased. By labeling the heart at diastole the chess-board pattern tagging of the heart wall could be followed...

  18. spsann - optimization of sample patterns using spatial simulated annealing

    Science.gov (United States)

    Samuel-Rosa, Alessandro; Heuvelink, Gerard; Vasques, Gustavo; Anjos, Lúcia

    2015-04-01

    There are many algorithms and computer programs to optimize sample patterns, some private and others publicly available. A few have only been presented in scientific articles and text books. This dispersion and somewhat poor availability is holds back to their wider adoption and further development. We introduce spsann, a new R-package for the optimization of sample patterns using spatial simulated annealing. R is the most popular environment for data processing and analysis. Spatial simulated annealing is a well known method with widespread use to solve optimization problems in the soil and geo-sciences. This is mainly due to its robustness against local optima and easiness of implementation. spsann offers many optimizing criteria for sampling for variogram estimation (number of points or point-pairs per lag distance class - PPL), trend estimation (association/correlation and marginal distribution of the covariates - ACDC), and spatial interpolation (mean squared shortest distance - MSSD). spsann also includes the mean or maximum universal kriging variance (MUKV) as an optimizing criterion, which is used when the model of spatial variation is known. PPL, ACDC and MSSD were combined (PAN) for sampling when we are ignorant about the model of spatial variation. spsann solves this multi-objective optimization problem scaling the objective function values using their maximum absolute value or the mean value computed over 1000 random samples. Scaled values are aggregated using the weighted sum method. A graphical display allows to follow how the sample pattern is being perturbed during the optimization, as well as the evolution of its energy state. It is possible to start perturbing many points and exponentially reduce the number of perturbed points. The maximum perturbation distance reduces linearly with the number of iterations. The acceptance probability also reduces exponentially with the number of iterations. R is memory hungry and spatial simulated annealing is a

  19. Spatial Patterns in Biofilm Diversity across Hierarchical Levels of River-Floodplain Landscapes.

    Directory of Open Access Journals (Sweden)

    Marc Peipoch

    Full Text Available River-floodplain systems are among the most diverse and productive ecosystems, but the effects of biophysical complexity at multiple scales on microbial biodiversity have not been studied. Here, we investigated how the hierarchical organization of river systems (i.e., region, floodplain, zone, habitats, and microhabitats influences epilithic biofilm community assemblage patterns by characterizing microbial communities using 16S rRNA gene sequence data and analyzing bacterial species distribution across local and regional scales. Results indicate that regional and local environmental filters concurrently sort bacterial species, suggesting that spatial configuration of epilithic biofilms resembles patterns of larger organisms in floodplain ecosystems. Along the hierarchical organization of fluvial systems, floodplains constitute a vector of maximum environmental heterogeneity and consequently act as a major landscape filter for biofilm species. Thus, river basins and associated floodplains may simply reflect very large scale 'patches' within which environmental conditions select for community composition of epilithic biofilms.

  20. Boundary-induced pattern formation from uniform temporal oscillation

    Science.gov (United States)

    Kohsokabe, Takahiro; Kaneko, Kunihiko

    2018-04-01

    Pattern dynamics triggered by fixing a boundary is investigated. By considering a reaction-diffusion equation that has a unique spatially uniform and limit cycle attractor under a periodic or Neumann boundary condition, and then by choosing a fixed boundary condition, we found three novel phases depending on the ratio of diffusion constants of activator to inhibitor: transformation of temporally periodic oscillation into a spatially periodic fixed pattern, travelling wave emitted from the boundary, and aperiodic spatiotemporal dynamics. The transformation into a fixed, periodic pattern is analyzed by crossing of local nullclines at each spatial point, shifted by diffusion terms, as is analyzed by using recursive equations, to obtain the spatial pattern as an attractor. The generality of the boundary-induced pattern formation as well as its relevance to biological morphogenesis is discussed.

  1. Spatial implications of covariate adjustment on patterns of risk

    DEFF Research Database (Denmark)

    Sabel, Clive Eric; Wilson, Jeff Gaines; Kingham, Simon

    2007-01-01

    Epidemiological studies that examine the relationship between environmental exposures and health often address other determinants of health that may influence the relationship being studied by adjusting for these factors as covariates. While disease surveillance methods routinely control...... for covariates such as deprivation, there has been limited investigative work on the spatial movement of risk at the intraurban scale due to the adjustment. It is important that the nature of any spatial relocation be well understood as a relocation to areas of increased risk may also introduce additional...... localised factors that influence the exposure-response relationship. This paper examines the spatial patterns of relative risk and clusters of hospitalisations based on an illustrative small-area example from Christchurch, New Zealand. A four-stage test of the spatial relocation effects of covariate...

  2. Spatially resolvable optical emission spectrometer for analyzing density uniformity of semiconductor process plasma

    International Nuclear Information System (INIS)

    Oh, Changhoon; Ryoo, Hoonchul; Lee, Hyungwoo; Hahn, Jae W.; Kim, Se-Yeon; Yi, Hun-Jung

    2010-01-01

    We proposed a spatially resolved optical emission spectrometer (SROES) for analyzing the uniformity of plasma density for semiconductor processes. To enhance the spatial resolution of the SROES, we constructed a SROES system using a series of lenses, apertures, and pinholes. We calculated the spatial resolution of the SROES for the variation of pinhole size, and our calculated results were in good agreement with the measured spatial variation of the constructed SROES. The performance of the SROES was also verified by detecting the correlation between the distribution of a fluorine radical in inductively coupled plasma etch process and the etch rate of a SiO 2 film on a silicon wafer.

  3. The Spatial Patterns of Dairy Farming In Molise

    Directory of Open Access Journals (Sweden)

    Ievoli Corrado

    2017-12-01

    Full Text Available The greater market orientation of European dairy production, caused by the end of quota regime, is likely to have consequences on less favoured areas, where breeding of dairy cattle plays both a crucial socio-economic and environmental role. Within this new framework, endogenous factors determining spatial reorganisation of the sector are becoming of increasing relevance. Based on these considerations, this study analyses the impact of the three broader classes of location determinants suggested by economic theory - factor endowment, market potential, and spatial agglomeration externalities - on the spatial pattern of milk production in Molise, a rural region in the south of Italy. Milk production is measured in term of dairy cows per hectare. The truncated distribution of this variable and its high degree of spatial autocorrelation prompted us to apply a Spatial Autoregressive Tobit model. Estimation results reveal that all three categories have a positive effect on the location of milk production, even if the influence of factor endowment (intended as forage area, and market potential (measured in term of proximity of dairy companies is quite limited. On the contrary, the impact of spatial externalities (related variety on the regional localisation of milk production is strongly significant. These results cast some doubts on the current measures of intervention and might suggest a new policy framework both at firm and spatial level

  4. On tests of randomness for spatial point patterns

    International Nuclear Information System (INIS)

    Doguwa, S.I.

    1990-11-01

    New tests of randomness for spatial point patterns are introduced. These test statistics are then compared in a power study with the existing alternatives. These results of the power study suggest that one of the tests proposed is extremely powerful against both aggregated and regular alternatives. (author). 9 refs, 7 figs, 3 tabs

  5. Spatial Patterning of Newly-Inserted Material during Bacterial Cell Growth

    Science.gov (United States)

    Ursell, Tristan

    2012-02-01

    In the life cycle of a bacterium, rudimentary microscopy demonstrates that cell growth and elongation are essential characteristics of cellular reproduction. The peptidoglycan cell wall is the main load-bearing structure that determines both cell shape and overall size. However, simple imaging of cellular growth gives no indication of the spatial patterning nor mechanism by which material is being incorporated into the pre-existing cell wall. We employ a combination of high-resolution pulse-chase fluorescence microscopy, 3D computational microscopy, and detailed mechanistic simulations to explore how spatial patterning results in uniform growth and maintenance of cell shape. We show that growth is happening in discrete bursts randomly distributed over the cell surface, with a well-defined mean size and average rate. We further use these techniques to explore the effects of division and cell wall disrupting antibiotics, like cephalexin and A22, respectively, on the patterning of cell wall growth in E. coli. Finally, we explore the spatial correlation between presence of the bacterial actin-like cytoskeletal protein, MreB, and local cell wall growth. Together these techniques form a powerful method for exploring the detailed dynamics and involvement of antibiotics and cell wall-associated proteins in bacterial cell growth.[4pt] In collaboration with Kerwyn Huang, Stanford University.

  6. The Urban Heat Island Impact in Consideration of Spatial Pattern of Urban Landscape and Structure

    Science.gov (United States)

    Kim, J.; Lee, D. K.; Jeong, W.; Sung, S.; Park, J.

    2015-12-01

    Preceding study has established a clear relationship between land surface temperature and area of land covers. However, only few studies have specifically examined the effects of spatial patterns of land covers and urban structure. To examine how much the local climate is affected by the spatial pattern in highly urbanized city, we investigated the correlation between land surface temperature and spatial patterns of land covers. In the analysis of correlation, we categorized urban structure to four different land uses: Apartment residential area, low rise residential area, industrial area and central business district. Through this study, we aims to examine the types of residential structure and land cover pattern for reducing urban heat island and sustainable development. Based on land surface temperature, we investigated the phenomenon of urban heat island through using the data of remote sensing. This study focused on Daegu in Korea. This city, one of the hottest city in Korea has basin form. We used high-resolution land cover data and land surface temperature by using Landsat8 satellite image to examine 100 randomly selected sample sites of 884.15km2 (1)In each land use, we quantified several landscape-levels and class-level landscape metrics for the sample study sites. (2)In addition, we measured the land surface temperature in 3 year hot summer seasons (July to September). Then, we investigated the pattern of land surface temperature for each land use through Ecognition package. (3)We deducted the Pearson correlation coefficients between land surface temperature and each landscape metrics. (4)We analyzed the variance among the four land uses. (5)Using linear regression, we determined land surface temperature model for each land use. (6)Through this analysis, we aims to examine the best pattern of land cover and artificial structure for reducing urban heat island effect in highly urbanized city. The results of linear regression showed that proportional land

  7. Area PEc Neurons Use a Multiphasic Pattern of Activity to Signal the Spatial Properties of Optic Flow

    Directory of Open Access Journals (Sweden)

    Milena Raffi

    2017-01-01

    Full Text Available The cortical representation of visual perception requires the integration of several-signal processing distributed across many cortical areas, but the neural substrates of such perception are largely unknown. The type of firing pattern exhibited by single neurons is an important indicator of dynamic circuitry within or across cortical areas. Neurons in area PEc are involved in the spatial mapping of the visual field; thus, we sought to analyze the firing pattern of activity of PEc optic flow neurons to shed some light on the cortical processing of visual signals. We quantified the firing activity of 152 optic flow neurons using a spline interpolation function, which allowed determining onset, end, and latency of each neuronal response. We found that many PEc neurons showed multiphasic activity, which is strictly related to the position of the eye and to the position of the focus of expansion (FOE of the flow field. PEc neurons showed a multiphasic activity comprised of excitatory phases interspersed with inhibitory pauses. This phasic pattern seems to be a very efficient way to signal the spatial location of visual stimuli, given that the same neuron sends different firing patterns according to a specific combination of FOE/eye position.

  8. Simulating spatial patterns of land-use change in Rondonia, Brazil

    International Nuclear Information System (INIS)

    Dale, V.H.; Southworth, F.; O'Neill, R.V.; Rosen, A.

    1992-01-01

    Large scale deforestation in the Brazilian state of Rondonia has resulted from massive colonization and has caused increases in atmospheric CO 2 , soil degradation, loss of extractive resources, and disruption of indigenous populations. A simulation model has been developed that integrates colonization, socioeconomic, and ecological submodels to estimate spatial patterns and rates of deforestation under different immigration policies, land tenure practices, and road development scenarios. It is used to model the socioeconomic causes and ecological impacts of rapid deforestation in Rondonia. The simulation can be used to identify scenarios that might optimize economic and agricultural sustainability or reduce emigration. Spatial analysis of the simulation projections shows that very different patterns of deforestation can result depending on whether soil suitability, distance to market or lot size is the prime factor affecting a colonist's choice of a lot. Projections of the amount and pattern of deforestation under specific scenarios of land-use choice and management can be used to explore the socioeconomic and ecological implications of land-use change

  9. Spatial pattern of ASG-EUPOS sites

    Science.gov (United States)

    Calka, Beata; Bielecka, Elzbieta; Figurski, Mariusz

    2017-12-01

    The article presents the spatial pattern analysis of the ASG-EUPOS permanent GNSS stations in Poland. Using different methods and tools (nearest neighbour, Riplay's K-function, morphology of Thiessen polygons) we proved that the station distribution model changes within scales. At short distances up to 65 km, which are typical lengths in the network, stations are irregularly dispersed. Increasing this distance to 130 km and over could result in a clustered pattern. The Thiessen polygon area in 72% depends on the level of urbanization, especially coverage of forested and built-up areas as well as the density of the transportation network. The smallest density of the ASG-EUPOS sites is one station over 10,000 sq. km, which is two times more than is stated in the national regulations. The mean distance from ASG-EUPOS location to the nearest station is about 41.5 km.

  10. Chromosome driven spatial patterning of proteins in bacteria.

    Directory of Open Access Journals (Sweden)

    Saeed Saberi

    Full Text Available The spatial patterning of proteins in bacteria plays an important role in many processes, from cell division to chemotaxis. In the asymmetrically dividing bacteria Caulobacter crescentus, a scaffolding protein, PopZ, localizes to both poles and aids the differential patterning of proteins between mother and daughter cells during division. Polar patterning of misfolded proteins in Escherichia coli has also been shown, and likely plays an important role in cellular ageing. Recent experiments on both of the above systems suggest that the presence of chromosome free regions along with protein multimerization may be a mechanism for driving the polar localization of proteins. We have developed a simple physical model for protein localization using only these two driving mechanisms. Our model reproduces all the observed patterns of PopZ and misfolded protein localization--from diffuse, unipolar, and bipolar patterns and can also account for the observed patterns in a variety of mutants. The model also suggests new experiments to further test the role of the chromosome in driving protein patterning, and whether such a mechanism is responsible for helping to drive the differentiation of the cell poles.

  11. Quantifying Landscape Spatial Pattern: What Is the State of the Art?

    Science.gov (United States)

    Eric J. Gustafson

    1998-01-01

    Landscape ecology is based on the premise that there are strong links between ecological pattern and ecological function and process. Ecological systems are spatially heterogeneous, exhibiting consid-erable complexity and variability in time and space. This variability is typically represented by categorical maps or by a collection of samples taken at specific spatial...

  12. Basic Characteristics and Spatial Patterns of Pseudo-Settlements—Taking Dalian as An Example

    Directory of Open Access Journals (Sweden)

    Jiaji Gao

    2016-01-01

    Full Text Available A person’s living behavior patterns are closely related to three types of settlements: real-life settlements, imagined settlements, and pseudo-settlements. The term “pseudo-settlement” (PS refers to the places that are selectively recorded and represented after the mass media chose and restructure the residence information. As the mass media rapidly develops and people’s way of obtaining information gradually change, PS has already become one of the main ways for people to recognize and understand real-life settlements, as well as describe their impressions of imagined settlements. PS also has a profound impact on tourism, employment, investment, migration, real estate development, etc. Thus, the study of PSs has important theoretical and practical significance. This paper proposes to put forward residential quarters where the mass media is displayed as the object of study and establishes the pseudo-settlement index system of Dalian in and elaborate analysis of the concept of PSs. From three aspects, including pseudo-buildings, pseudo-districts and pseudo-culture, this paper uses the ArcGIS 10.0 kernel density (spacial analyst to analyze and interpret the basic characteristics and spatial patterns of 14 elements of the PS in Dalian. Through systemic clustering analysis, it identifies eight major types of PSs in Dalian. Then it systematically elaborates current situations and characteristics of the spatial pattern of PSs in Dalian, namely: regionally concentrated, widely scattered and blank spaces without pseudo-settlements. Finally, this paper discusses the mechanism of formation of PSs in Dalian.

  13. Basic Characteristics and Spatial Patterns of Pseudo-Settlements—Taking Dalian as An Example

    Science.gov (United States)

    Gao, Jiaji; Zhang, Yingjia; Li, Xueming

    2016-01-01

    A person’s living behavior patterns are closely related to three types of settlements: real-life settlements, imagined settlements, and pseudo-settlements. The term “pseudo-settlement” (PS) refers to the places that are selectively recorded and represented after the mass media chose and restructure the residence information. As the mass media rapidly develops and people’s way of obtaining information gradually change, PS has already become one of the main ways for people to recognize and understand real-life settlements, as well as describe their impressions of imagined settlements. PS also has a profound impact on tourism, employment, investment, migration, real estate development, etc. Thus, the study of PSs has important theoretical and practical significance. This paper proposes to put forward residential quarters where the mass media is displayed as the object of study and establishes the pseudo-settlement index system of Dalian in and elaborate analysis of the concept of PSs. From three aspects, including pseudo-buildings, pseudo-districts and pseudo-culture, this paper uses the ArcGIS 10.0 kernel density (spacial analyst) to analyze and interpret the basic characteristics and spatial patterns of 14 elements of the PS in Dalian. Through systemic clustering analysis, it identifies eight major types of PSs in Dalian. Then it systematically elaborates current situations and characteristics of the spatial pattern of PSs in Dalian, namely: regionally concentrated, widely scattered and blank spaces without pseudo-settlements. Finally, this paper discusses the mechanism of formation of PSs in Dalian. PMID:26805859

  14. Burstiness in Viral Bursts: How Stochasticity Affects Spatial Patterns in Virus-Microbe Dynamics

    Science.gov (United States)

    Lin, Yu-Hui; Taylor, Bradford P.; Weitz, Joshua S.

    Spatial patterns emerge in living systems at the scale of microbes to metazoans. These patterns can be driven, in part, by the stochasticity inherent to the birth and death of individuals. For microbe-virus systems, infection and lysis of hosts by viruses results in both mortality of hosts and production of viral progeny. Here, we study how variation in the number of viral progeny per lysis event affects the spatial clustering of both viruses and microbes. Each viral ''burst'' is initially localized at a near-cellular scale. The number of progeny in a single lysis event can vary in magnitude between tens and thousands. These perturbations are not accounted for in mean-field models. Here we developed individual-based models to investigate how stochasticity affects spatial patterns in virus-microbe systems. We measured the spatial clustering of individuals using pair correlation functions. We found that increasing the burst size of viruses while maintaining the same production rate led to enhanced clustering. In this poster we also report on preliminary analysis on the evolution of the burstiness of viral bursts given a spatially distributed host community.

  15. Integrating the statistical analysis of spatial data in ecology

    Science.gov (United States)

    A. M. Liebhold; J. Gurevitch

    2002-01-01

    In many areas of ecology there is an increasing emphasis on spatial relationships. Often ecologists are interested in new ways of analyzing data with the objective of quantifying spatial patterns, and in designing surveys and experiments in light of the recognition that there may be underlying spatial pattern in biotic responses. In doing so, ecologists have adopted a...

  16. Large-area imaging reveals biologically driven non-random spatial patterns of corals at a remote reef

    Science.gov (United States)

    Edwards, Clinton B.; Eynaud, Yoan; Williams, Gareth J.; Pedersen, Nicole E.; Zgliczynski, Brian J.; Gleason, Arthur C. R.; Smith, Jennifer E.; Sandin, Stuart A.

    2017-12-01

    For sessile organisms such as reef-building corals, differences in the degree of dispersion of individuals across a landscape may result from important differences in life-history strategies or may reflect patterns of habitat availability. Descriptions of spatial patterns can thus be useful not only for the identification of key biological and physical mechanisms structuring an ecosystem, but also by providing the data necessary to generate and test ecological theory. Here, we used an in situ imaging technique to create large-area photomosaics of 16 plots at Palmyra Atoll, central Pacific, each covering 100 m2 of benthic habitat. We mapped the location of 44,008 coral colonies and identified each to the lowest taxonomic level possible. Using metrics of spatial dispersion, we tested for departures from spatial randomness. We also used targeted model fitting to explore candidate processes leading to differences in spatial patterns among taxa. Most taxa were clustered and the degree of clustering varied by taxon. A small number of taxa did not significantly depart from randomness and none revealed evidence of spatial uniformity. Importantly, taxa that readily fragment or tolerate stress through partial mortality were more clustered. With little exception, clustering patterns were consistent with models of fragmentation and dispersal limitation. In some taxa, dispersion was linearly related to abundance, suggesting density dependence of spatial patterning. The spatial patterns of stony corals are non-random and reflect fundamental life-history characteristics of the taxa, suggesting that the reef landscape may, in many cases, have important elements of spatial predictability.

  17. Complex temporal and spatial patterns in nonequilibrium processes

    International Nuclear Information System (INIS)

    1992-01-01

    Dynamical systems methods have been used to study bifurcations and pattern formation in nonequilibrium systems. Accomplishments during this period include: information-theoretic methods for analyzing chaos, chemical reactors for studying sustained reaction-diffusion patterns, a reactor exploiting pattern formation to extract short- lived intermediate species, observation of bifurcation from periodic to quasiperiodic rotating chemical spiral patterns, observation of a Turing bifurcation (transition from uniform state to a stationary chemical pattern), method for extracting noise strength in ramped convection, self-similar fractal structure of Zn clusters in electrodeposition, and dynamical instability in crack propagation

  18. Selection of doublet cellular patterns in directional solidification through spatially periodic perturbations

    International Nuclear Information System (INIS)

    Losert, W.; Stillman, D.A.; Cummins, H.Z.; Kopczynski, P.; Rappel, W.; Karma, A.

    1998-01-01

    Pattern formation at the solid-liquid interface of a growing crystal was studied in directional solidification using a perturbation technique. We analyzed both experimentally and numerically the stability range and dynamical selection of cellular arrays of 'doublets' with asymmetric tip shapes, separated by alternate deep and shallow grooves. Applying an initial periodic perturbation of arbitrary wavelength to the unstable planar interface allowed us to force the interface to evolve into doublet states that would not otherwise be dynamically accessible from a planar interface. We determined systematically the ranges of wavelength corresponding to stable singlets, stable doublets, and transient unstable patterns. Experimentally, this was accomplished by applying a brief UV light pulse of a desired spatial periodicity to the planar interface during the planar-cellular transient using the model alloy Succinonitrile-Coumarin 152. Numerical simulations of the nonlinear evolution of the interface were performed starting from a small sinusoidal perturbation of the steady-state planar interface. These simulations were carried out using a computationally efficient phase-field symmetric model of directional solidification with recently reformulated asymptotics and vanishing kinetics [A. Karma and W.-J. Rappel, Phys. Rev. E 53 R3017 (1996); Phys. Rev. Lett. 77, 4050 (1996); Phys. Rev. E 57, 4323 (1998)], which allowed us to simulate spatially extended arrays that can be meaningfully compared to experiments. Simulations and experiments show remarkable qualitative agreement in the dynamic evolution, steady-state structure, and instability mechanisms of doublet cellular arrays. copyright 1998 The American Physical Society

  19. Spatial Pattern Determination of Biodiversity Threats at Landscape Level (Case Study: Golestan Province)

    OpenAIRE

    R. Mirzaei; A. Esmaili-Sari; M. R. Hemami; H. R. Rezaei

    2015-01-01

    Mapping spatial patterns of potential biodiversity threats is one of the important steps for effective conservation planning and activities. To determine the spatial patterns of threats in Golestan province, 12 criteria in four main groups including structural (fractal coefficient of perimeter, circularity ratio of area, average slope), compositional aspects of biodiversity (presence of species at risk), non-biological threats (distance to city, distance to village, distance to road, distance...

  20. Quantifying urban growth patterns in Hanoi using landscape expansion modes and time series spatial metrics

    Science.gov (United States)

    Lepczyk, Christopher A.; Miura, Tomoaki; Fox, Jefferson M.

    2018-01-01

    Urbanization has been driven by various social, economic, and political factors around the world for centuries. Because urbanization continues unabated in many places, it is crucial to understand patterns of urbanization and their potential ecological and environmental impacts. Given this need, the objectives of our study were to quantify urban growth rates, growth modes, and resultant changes in the landscape pattern of urbanization in Hanoi, Vietnam from 1993 to 2010 and to evaluate the extent to which the process of urban growth in Hanoi conformed to the diffusion-coalescence theory. We analyzed the spatiotemporal patterns and dynamics of the built-up land in Hanoi using landscape expansion modes, spatial metrics, and a gradient approach. Urbanization was most pronounced in the periods of 2001–2006 and 2006–2010 at a distance of 10 to 35 km around the urban center. Over the 17 year period urban expansion in Hanoi was dominated by infilling and edge expansion growth modes. Our findings support the diffusion-coalescence theory of urbanization. The shift of the urban growth areas over time and the dynamic nature of the spatial metrics revealed important information about our understanding of the urban growth process and cycle. Furthermore, our findings can be used to evaluate urban planning policies and aid in urbanization issues in rapidly urbanizing countries. PMID:29734346

  1. Quantifying urban growth patterns in Hanoi using landscape expansion modes and time series spatial metrics.

    Science.gov (United States)

    Nong, Duong H; Lepczyk, Christopher A; Miura, Tomoaki; Fox, Jefferson M

    2018-01-01

    Urbanization has been driven by various social, economic, and political factors around the world for centuries. Because urbanization continues unabated in many places, it is crucial to understand patterns of urbanization and their potential ecological and environmental impacts. Given this need, the objectives of our study were to quantify urban growth rates, growth modes, and resultant changes in the landscape pattern of urbanization in Hanoi, Vietnam from 1993 to 2010 and to evaluate the extent to which the process of urban growth in Hanoi conformed to the diffusion-coalescence theory. We analyzed the spatiotemporal patterns and dynamics of the built-up land in Hanoi using landscape expansion modes, spatial metrics, and a gradient approach. Urbanization was most pronounced in the periods of 2001-2006 and 2006-2010 at a distance of 10 to 35 km around the urban center. Over the 17 year period urban expansion in Hanoi was dominated by infilling and edge expansion growth modes. Our findings support the diffusion-coalescence theory of urbanization. The shift of the urban growth areas over time and the dynamic nature of the spatial metrics revealed important information about our understanding of the urban growth process and cycle. Furthermore, our findings can be used to evaluate urban planning policies and aid in urbanization issues in rapidly urbanizing countries.

  2. EFFECTS OF HETEROGENIETY ON SPATIAL PATTERN ANALYSIS OF WILD PISTACHIO TREES IN ZAGROS WOODLANDS, IRAN

    Directory of Open Access Journals (Sweden)

    Y. Erfanifard

    2014-10-01

    Full Text Available Vegetation heterogeneity biases second-order summary statistics, e.g., Ripley's K-function, applied for spatial pattern analysis in ecology. Second-order investigation based on Ripley's K-function and related statistics (i.e., L- and pair correlation function g is widely used in ecology to develop hypothesis on underlying processes by characterizing spatial patterns of vegetation. The aim of this study was to demonstrate effects of underlying heterogeneity of wild pistachio (Pistacia atlantica Desf. trees on the second-order summary statistics of point pattern analysis in a part of Zagros woodlands, Iran. The spatial distribution of 431 wild pistachio trees was accurately mapped in a 40 ha stand in the Wild Pistachio & Almond Research Site, Fars province, Iran. Three commonly used second-order summary statistics (i.e., K-, L-, and g-functions were applied to analyse their spatial pattern. The two-sample Kolmogorov-Smirnov goodness-of-fit test showed that the observed pattern significantly followed an inhomogeneous Poisson process null model in the study region. The results also showed that heterogeneous pattern of wild pistachio trees biased the homogeneous form of K-, L-, and g-functions, demonstrating a stronger aggregation of the trees at the scales of 0–50 m than actually existed and an aggregation at scales of 150–200 m, while regularly distributed. Consequently, we showed that heterogeneity of point patterns may bias the results of homogeneous second-order summary statistics and we also suggested applying inhomogeneous summary statistics with related null models for spatial pattern analysis of heterogeneous vegetations.

  3. Effects of Heterogeniety on Spatial Pattern Analysis of Wild Pistachio Trees in Zagros Woodlands, Iran

    Science.gov (United States)

    Erfanifard, Y.; Rezayan, F.

    2014-10-01

    Vegetation heterogeneity biases second-order summary statistics, e.g., Ripley's K-function, applied for spatial pattern analysis in ecology. Second-order investigation based on Ripley's K-function and related statistics (i.e., L- and pair correlation function g) is widely used in ecology to develop hypothesis on underlying processes by characterizing spatial patterns of vegetation. The aim of this study was to demonstrate effects of underlying heterogeneity of wild pistachio (Pistacia atlantica Desf.) trees on the second-order summary statistics of point pattern analysis in a part of Zagros woodlands, Iran. The spatial distribution of 431 wild pistachio trees was accurately mapped in a 40 ha stand in the Wild Pistachio & Almond Research Site, Fars province, Iran. Three commonly used second-order summary statistics (i.e., K-, L-, and g-functions) were applied to analyse their spatial pattern. The two-sample Kolmogorov-Smirnov goodness-of-fit test showed that the observed pattern significantly followed an inhomogeneous Poisson process null model in the study region. The results also showed that heterogeneous pattern of wild pistachio trees biased the homogeneous form of K-, L-, and g-functions, demonstrating a stronger aggregation of the trees at the scales of 0-50 m than actually existed and an aggregation at scales of 150-200 m, while regularly distributed. Consequently, we showed that heterogeneity of point patterns may bias the results of homogeneous second-order summary statistics and we also suggested applying inhomogeneous summary statistics with related null models for spatial pattern analysis of heterogeneous vegetations.

  4. Spatial pattern of structural ageing in eastern Croatia: evolution and explanations

    Directory of Open Access Journals (Sweden)

    Marijan Jukic

    2015-11-01

    Full Text Available This article aims to examine the ageing situation and social policy issues in the Osijek-Baranja County of eastern Croatia. Using historical evidence from census data, research suggests that the evolution of the ageing pattern has been mainly determined by such factors as development of the transport system, changes in political-territorial organisation, supply of jobs in the cities, deagrarianisation and a domestic war in the 1990s. The increased importance of urban centres, through planned industrialisation and administrative centralisation, has accelerated and intensified rural-tourban migration. Consequently, the spatial pattern of structural ageing has been substantially affected. A significant variation was found in urban and rural areas and also within sub-regional units. The findings suggest that the evolution of spatial disparities in the ageing pattern is because of unplanned migration; spatial differences in the level of socio-economic development; the influence of tradition, such as higher fertility rates historically in some areas; and suburbanisation, notably around the city of Osijek. The article concludes that ageing is affecting the country's economic growth and the formal and informal social support systems, including the provision of resources for older citizens in the endangered areas.

  5. Spatial patterning and floral synchrony among trillium populations with contrasting histories of herbivory

    Directory of Open Access Journals (Sweden)

    Christopher R. Webster

    2015-02-01

    Full Text Available We investigated the spatial patterning and floral synchrony within and among populations of a non-clonal, forest understory herb, Trillium catesbaei. Two populations of T. catesbaei within Great Smoky Mountains National Park were monitored for five years: Cades Cove (high deer abundance and Whiteoak Sink (low deer abundance. All individuals within each population were mapped during year one and five. Only flowering and single-leaf juveniles were mapped during intervening years. Greater distances between flowering plants (plants currently in flower and substantially lower population densities and smaller patch sizes were observed at Cades Cove versus Whiteoak Sink. However, with the exception of flowering plants, contrasting histories of herbivory did not appear to fundamentally alter the spatial patterning of the T. catesbaei population at Cades Cove, an area with a long and well-documented history of deer overabundance. Regardless of browse history, non-flowering life stages were significantly clustered at all spatial scales examined. Flowering plants were clustered in all years at Whiteoak Sink, but more often randomly distributed at Cades Cove, possibly as a result of their lower abundance. Between years, however, there was a positive spatial association between the locations of flowering plants at both sites. Flowering rate was synchronous between sites, but lagged a year behind favorable spring growing conditions, which likely allowed plants to allocate photosynthate from a favorable year towards flowering the subsequent year. Collectively, our results suggest that chronically high levels of herbivory may be associated with spatial patterning of flowering within populations of a non-clonal plant. They also highlight the persistence of underlying spatial patterns, as evidenced by high levels of spatial clustering among non-flowering individuals, and the pervasive, although muted in a population subjected to chronic herbivory, influence of

  6. Spatial pattern of agricultural land conversion in West Java Province

    Science.gov (United States)

    Maryati, S.; Humaira, A. N. S.; Pratiwi, F.

    2018-03-01

    Population growth has an implication on increasing demand for land. The demand for built-up area is filled by land conversion, mostly from agricultural land. On the other hand, population growth requires an increase in food production as well as land for agriculture. Conversion of agricultural land can threaten the availability and food security. The purpose of this study is to identify the spatial pattern of changes in agricultural land in West Java Province as input to improve food security condition in this province. Descriptive statistics and spatial analysis were used to analyse the area of agricultural land, conversion of agricultural land, and spatial pattern of changes in agricultural land in West Java Province. The data used is time series data in the period of 2005-2014. The result of analysis shows that there are still areas with a high percentage of agricultural land in West Java Province. The rate of conversion of agricultural land varies widely. Cities or regions with very high land conversion rate tend to concentrate in metropolitan areas.

  7. Citizen science: A new perspective to advance spatial pattern evaluation in hydrology.

    Science.gov (United States)

    Koch, Julian; Stisen, Simon

    2017-01-01

    Citizen science opens new pathways that can complement traditional scientific practice. Intuition and reasoning often make humans more effective than computer algorithms in various realms of problem solving. In particular, a simple visual comparison of spatial patterns is a task where humans are often considered to be more reliable than computer algorithms. However, in practice, science still largely depends on computer based solutions, which inevitably gives benefits such as speed and the possibility to automatize processes. However, the human vision can be harnessed to evaluate the reliability of algorithms which are tailored to quantify similarity in spatial patterns. We established a citizen science project to employ the human perception to rate similarity and dissimilarity between simulated spatial patterns of several scenarios of a hydrological catchment model. In total, the turnout counts more than 2500 volunteers that provided over 43000 classifications of 1095 individual subjects. We investigate the capability of a set of advanced statistical performance metrics to mimic the human perception to distinguish between similarity and dissimilarity. Results suggest that more complex metrics are not necessarily better at emulating the human perception, but clearly provide auxiliary information that is valuable for model diagnostics. The metrics clearly differ in their ability to unambiguously distinguish between similar and dissimilar patterns which is regarded a key feature of a reliable metric. The obtained dataset can provide an insightful benchmark to the community to test novel spatial metrics.

  8. Small regulatory RNAs may sharpen spatial expression patterns.

    Directory of Open Access Journals (Sweden)

    Erel Levine

    2007-11-01

    Full Text Available The precise establishment of gene expression patterns is a crucial step in development. Formation of a sharp boundary between high and low spatial expression domains requires a genetic mechanism that exhibits sensitivity, yet is robust to fluctuations, a demand that may not be easily achieved by morphogens alone. Recently, it has been demonstrated that small RNAs (and, in particular, microRNAs play many roles in embryonic development. Whereas some RNAs are essential for embryogenesis, others are limited to fine-tuning a predetermined gene expression pattern. Here, we explore the possibility that small RNAs participate in sharpening a gene expression profile that was crudely established by a morphogen. To this end, we study a model in which small RNAs interact with a target gene and diffusively move from cell to cell. Though diffusion generally smoothens spatial expression patterns, we find that intercellular mobility of small RNAs is actually critical in sharpening the interface between target expression domains in a robust manner. This sharpening occurs as small RNAs diffuse into regions of low mRNA expression and eliminate target molecules therein, but cannot affect regions of high mRNA levels. We discuss the applicability of our results, as examples, to the case of leaf polarity establishment in maize and Hox patterning in the early Drosophila embryo. Our findings point out the functional significance of some mechanistic properties, such as mobility of small RNAs and the irreversibility of their interactions. These properties are yet to be established directly for most classes of small RNAs. An indirect yet simple experimental test of the proposed mechanism is suggested in some detail.

  9. Response of spatial point pattern of halostachys caspica population to ground water depth

    International Nuclear Information System (INIS)

    Niu, P.; Wang, M.; Jiang, P.; Li, M.; Chu, G.

    2017-01-01

    We subjected Halostachys caspica populations to three groundwater depths: shallow ( 4.5 m) in the sample plots, at the diluvial fan of the South Junggar Basin. Both the spatial pattern and spatial association of the population among all three groundwater depths and four growth stages were studied to investigate the impact of groundwater depth on the formation and persistence mechanism of the spatial pattern of Halostachys caspica populations. In this study, Ripley's K function was utilized to characterize spatial patterns and intraspecific associations of H. caspica in three 1-ha plots, as well as to study their relationship with groundwater depth. The seedling supplement severely decreased with increasing groundwater depth, and the population structure changed noticeably due to increased amount of dead standing plants. Different growth stages of the H. caspica population all had aggregated distributions at small scale in the three groundwater depth areas. With increasing scales, the aggregation intensity weakened in all growth stages. Distribution was aggregated at 50 m scales in both the shallow and middle groundwater depth areas, while the deep groundwater depth area followed a random distribution. (author)

  10. Measuring spatial patterns in floodplains: A step towards understanding the complexity of floodplain ecosystems: Chapter 6

    Science.gov (United States)

    Scown, Murray W.; Thoms, Martin C.; DeJager, Nathan R.; Gilvear, David J.; Greenwood, Malcolm T.; Thoms, Martin C.; Wood, Paul J.

    2016-01-01

    Floodplains can be viewed as complex adaptive systems (Levin, 1998) because they are comprised of many different biophysical components, such as morphological features, soil groups and vegetation communities as well as being sites of key biogeochemical processing (Stanford et al., 2005). Interactions and feedbacks among the biophysical components often result in additional phenomena occuring over a range of scales, often in the absence of any controlling factors (sensu Hallet, 1990). This emergence of new biophysical features and rates of processing can lead to alternative stable states which feed back into floodplain adaptive cycles (cf. Hughes, 1997; Stanford et al., 2005). Interactions between different biophysical components, feedbacks, self emergence and scale are all key properties of complex adaptive systems (Levin, 1998; Phillips, 2003; Murray et al., 2014) and therefore will influence the manner in which we study and view spatial patterns. Measuring the spatial patterns of floodplain biophysical components is a prerequisite to examining and understanding these ecosystems as complex adaptive systems. Elucidating relationships between pattern and process, which are intrinsically linked within floodplains (Ward et al., 2002), is dependent upon an understanding of spatial pattern. This knowledge can help river scientists determine the major drivers, controllers and responses of floodplain structure and function, as well as the consequences of altering those drivers and controllers (Hughes and Cass, 1997; Whited et al., 2007). Interactions and feedbacks between physical, chemical and biological components of floodplain ecosystems create and maintain a structurally diverse and dynamic template (Stanford et al., 2005). This template influences subsequent interactions between components that consequently affect system trajectories within floodplains (sensu Bak et al., 1988). Constructing and evaluating models used to predict floodplain ecosystem responses to

  11. Patterned-string tasks: relation between fine motor skills and visual-spatial abilities in parrots.

    Directory of Open Access Journals (Sweden)

    Anastasia Krasheninnikova

    Full Text Available String-pulling and patterned-string tasks are often used to analyse perceptual and cognitive abilities in animals. In addition, the paradigm can be used to test the interrelation between visual-spatial and motor performance. Two Australian parrot species, the galah (Eolophus roseicapilla and the cockatiel (Nymphicus hollandicus, forage on the ground, but only the galah uses its feet to manipulate food. I used a set of string pulling and patterned-string tasks to test whether usage of the feet during foraging is a prerequisite for solving the vertical string pulling problem. Indeed, the two species used techniques that clearly differed in the extent of beak-foot coordination but did not differ in terms of their success in solving the string pulling task. However, when the visual-spatial skills of the subjects were tested, the galahs outperformed the cockatiels. This supports the hypothesis that the fine motor skills needed for advanced beak-foot coordination may be interrelated with certain visual-spatial abilities needed for solving patterned-string tasks. This pattern was also found within each of the two species on the individual level: higher motor abilities positively correlated with performance in patterned-string tasks. This is the first evidence of an interrelation between visual-spatial and motor abilities in non-mammalian animals.

  12. Spatial Patterns and the Regional Differences of Rural Settlements in Jilin Province, China

    Directory of Open Access Journals (Sweden)

    Xiaoyan Li

    2017-11-01

    Full Text Available The spatial patterns of rural settlements are important for understanding the drivers of land use change and the relationship between human activity and environmental processes. It has been suggested that the clustering of houses decreases the negative effects on the environment and promotes the development of the countryside, but few empirical studies have quantified the spatial distribution patterns of houses. Our aim was to explore the regional differences in rural settlement patterns and expand our understanding of their geographic associations, and thus contribute to land use planning and the implementation of the policy of “building a new countryside”. We used spatial statistical methods and indices of landscape metrics to investigate different settlement patterns in three typical counties within different environments in Jilin Province, Northeast China. The results indicated that rural settlements in these three counties were all clustered, but to a varied degree. Settlement density maps and landscape metrics displayed uniformity of the settlement distributions within plain, hill, and mountainous areas. Influenced by the physical environment, the scale, form, and degree of aggregation varied. Accordingly, three types of rural settlements were summarized: a low-density, large-scale and sparse type; a mass-like and point-scattered type; and a low-density and high cluster-like type. The spatial patterns of rural settlements are the result of anthropogenic and complex physical processes, and provide an important insight for the layout and management of the countryside.

  13. Analysis of Spatial Pattern and Influencing Factors of E-Commerce

    Science.gov (United States)

    Zhang, Y.; Chen, J.; Zhang, S.

    2017-09-01

    This paper aims to study the relationship between e-commerce development and geographical characteristics using data of e-commerce, economy, Internet, express delivery and population from 2011 to 2015. Moran's I model and GWR model are applied to analyze the spatial pattern of E-commerce and its influencing factors. There is a growth trend of e-commerce from west to east, and it is obvious to see that e-commerce development has a space-time clustering, especially around the Yangtze River delta. The comprehensive factors caculated through PCA are described as fundamental social productivity, resident living standard and population sex structure. The first two factors have positive correlation with e-commerce, and the intensity of effect increases yearly. However, the influence of population sex structure on the E-commerce development is not significant. Our results suggest that the clustering of e-commerce has a downward trend and the impact of driving factors on e-commerce is observably distinct from year to year in space.

  14. Spatial statistics detect clustering patterns of kidney diseases in south-eastern Romania

    Directory of Open Access Journals (Sweden)

    Ruben I.

    2016-02-01

    Full Text Available Medical geography was conceptualized almost ten years ago due to its obvious usefulness in epidemiological research. Still, numerous diseases in many regions were neglected in these aspects of research, and the prevalence of kidney diseases in Eastern Europe is such an example. We evaluated the spatial patterns of main kidney diseases in south-eastern Romania, and highlighted the importance of spatial modeling in medical management in Romania. We found two statistically significant hotspots of kidney diseases prevalence. We also found differences in the spatial patterns between categories of diseases. We propose to speed up the process of creating a national database of records on kidney diseases. Offering the researchers access to a national database will allow further epidemiology studies in Romania and finally lead to a better management of medical services.

  15. Optimizing spatial patterns with sparse filter bands for motor-imagery based brain-computer interface.

    Science.gov (United States)

    Zhang, Yu; Zhou, Guoxu; Jin, Jing; Wang, Xingyu; Cichocki, Andrzej

    2015-11-30

    Common spatial pattern (CSP) has been most popularly applied to motor-imagery (MI) feature extraction for classification in brain-computer interface (BCI) application. Successful application of CSP depends on the filter band selection to a large degree. However, the most proper band is typically subject-specific and can hardly be determined manually. This study proposes a sparse filter band common spatial pattern (SFBCSP) for optimizing the spatial patterns. SFBCSP estimates CSP features on multiple signals that are filtered from raw EEG data at a set of overlapping bands. The filter bands that result in significant CSP features are then selected in a supervised way by exploiting sparse regression. A support vector machine (SVM) is implemented on the selected features for MI classification. Two public EEG datasets (BCI Competition III dataset IVa and BCI Competition IV IIb) are used to validate the proposed SFBCSP method. Experimental results demonstrate that SFBCSP help improve the classification performance of MI. The optimized spatial patterns by SFBCSP give overall better MI classification accuracy in comparison with several competing methods. The proposed SFBCSP is a potential method for improving the performance of MI-based BCI. Copyright © 2015 Elsevier B.V. All rights reserved.

  16. Spatial statistics of pitting corrosion patterning: Quadrat counts and the non-homogeneous Poisson process

    International Nuclear Information System (INIS)

    Lopez de la Cruz, J.; Gutierrez, M.A.

    2008-01-01

    This paper presents a stochastic analysis of spatial point patterns as effect of localized pitting corrosion. The Quadrat Counts method is studied with two empirical pit patterns. The results are dependent on the quadrat size and bias is introduced when empty quadrats are accounted for the analysis. The spatially inhomogeneous Poisson process is used to improve the performance of the Quadrat Counts method. The latter combines Quadrat Counts with distance-based statistics in the analysis of pit patterns. The Inter-Event and the Nearest-Neighbour statistics are here implemented in order to compare their results. Further, the treatment of patterns in irregular domains is discussed

  17. Revealing the Driving Forces of Mid-Cities Urban Growth Patterns Using Spatial Modeling: a Case Study of Los Ángeles, Chile

    Directory of Open Access Journals (Sweden)

    Mauricio I. Aguayo

    2007-06-01

    Full Text Available City growth and changes in land-use patterns cause various important social and environmental impacts. To understand the spatial and temporal dynamics of these processes, the factors that drive urban development must be identified and analyzed, especially those factors that can be used to predict future changes and their potential environmental effects. Our objectives were to quantify the relationship between urban growth and its driving forces and to predict the spatial growth pattern based on historical land-use changes for the city of Los Ángeles in central Chile. This involved the analysis of images from 1978, 1992, and 1998 and characterization of the spatial pattern of land-use change; the construction of digital coverage in GIS; the selection of predictive variables through univariate analysis; the construction of logistic regression models using growth vs. nongrowth for 1978-1992 as the dependent variable; and the prediction of the probability of land-use change by applying the regression model to the 1992-1998 period. To investigate the influence of spatial scale, we constructed several sets of models that contained (1 only distance variables, e.g., distance to highways; (2 only scale-dependent density variables, e.g., density of urban area within a 600-m radius; (3 both distance and density variables; and (4 both distance and density variables at several spatial scales. The environmental variables were included in all models. The combination of distance and density variables at several scales is required to appropriately capture the multiscale urban growth process. The best models correctly predict ~90% of the observed land-use changes for 1992-1998. The distance to access roads, densities of the urban road system and urbanized area at various scales, and soil type were the strongest predictors of the growth pattern. Other variables were less important or not significant in explaining the urban growth process. Our approach, which

  18. Spatial relationships and movement patterns of the air cargo industry in airport regions

    Directory of Open Access Journals (Sweden)

    Petrus J. van V. Coetzee

    2017-05-01

    Full Text Available Background: During the past few years, with the increase in air traffic and the expansion of airports, very few industries had such a large spatial development and movement impact as that of airport-related clusters or airport regions. Although much research was done on the various impacts of the airport industry, very little research was done on the air cargo industry in airport regions. Objectives: This article specifically explored the unique spatial relationships, impacts, trends and movement patterns of the air cargo industry within a typical airport region. Method: The article focused on the OR Tambo International Airport in Gauteng, South Africa, as a case study and was informed by an extensive quantitative spatial and land use analysis and modelling of the study area. Results: The article presented findings and insights on the movement patterns and relationships between (1 the airport facility and (2 the spatial configuration of air cargo industries in the particular airport region. These findings also provided some framework for a possible spatial model and guideline that could assist in steering and managing development and movement patterns in airport regions. Conclusion: The article provided new insights and understanding on the spatial dynamics of airport regions and the air cargo industry, ultimately addressing some gaps in this knowledge field. The article in the end highlighted the need for a different and novel approach to the planning and management of the air cargo industry in airport regions and a basis for further research.

  19. Detection of viruses and the spatial and temporal spread patterns of viral diseases of cucurbits (Cucurbitaceae spp.) in the coastal savannah zone of Ghana

    International Nuclear Information System (INIS)

    Gyamena, A. E

    2013-07-01

    Cucurbits are susceptible to over 35 plant viruses; each of these viruses is capable of causing total crop failure in a poorly managed virus pathosystem. The objectives of this study were to detect the viruses that infect six cucurbit species in the coastal savannah zone of Ghana and to describe the spatial and temporal spread patterns of virus epidemics in zucchini squash (Cucurbita pepo L.) by the use of mathematical and geostatistical models. Cucumber (Cucumis sativus L.), watermelon (Citrullus lanatus Thunb.), zucchini squash (Cucurbita pepo L.), butternut squash (Cucurbita moschata Duchesne), egushi (Citrullus colocynthis L. Schrad.) and melon (Cucumis melo L.) were grown on an experimental field in the coastal savannah zone of Ghana and were monitored for the expression of virus and virus-like symptoms. The observed symptoms were further confirmed by Double Antibody Sandwich Enzyme-Linked Immunosorbent Assay (DAS ELISA) and mechanical inoculation of indicator plants. The temporal spread patterns of virus disease in zucchini squash were analyzed by exponential logistic, monomolecular and gompertz mechanistic models. The spatial patterns of virus disease spread in zucchini squash field were analyzed by semivariograms and inverse distance weighing (IDW) methods. Cucumber, zucchini squash, melon and butternut squash were infected by both Cucumber mosaic virus (CMW) and Papaya ringspot virus (PRSV-W). Egushi was infected by CMW but not PRSV-W. None of the six cucurbit species were infected by Watermelon mosaic virus (WMV) or Zucchini yellow mosaic virus (ZYMV). The temporal pattern of disease incidence in the zucchini squash field followed the gompertz function with an average apparent infection rate of 0.026 per day. The temporal pattern of disease severity was best described by the exponential model with coefficient of determination of 94.38 % and rate of progress disease severity of 0.114 per day. As at 49 days after planting (DAP), disease incidence and

  20. Evidence of Territoriality and Species Interactions from Spatial Point-Pattern Analyses of Subarctic-Nesting Geese

    Science.gov (United States)

    Reiter, Matthew E.; Andersen, David E.

    2013-01-01

    Quantifying spatial patterns of bird nests and nest fate provides insights into processes influencing a species’ distribution. At Cape Churchill, Manitoba, Canada, recent declines in breeding Eastern Prairie Population Canada geese (Branta canadensis interior) has coincided with increasing populations of nesting lesser snow geese (Chen caerulescens caerulescens) and Ross’s geese (Chen rossii). We conducted a spatial analysis of point patterns using Canada goose nest locations and nest fate, and lesser snow goose nest locations at two study areas in northern Manitoba with different densities and temporal durations of sympatric nesting Canada and lesser snow geese. Specifically, we assessed (1) whether Canada geese exhibited territoriality and at what scale and nest density; and (2) whether spatial patterns of Canada goose nest fate were associated with the density of nesting lesser snow geese as predicted by the protective-association hypothesis. Between 2001 and 2007, our data suggest that Canada geese were territorial at the scale of nearest neighbors, but were aggregated when considering overall density of conspecifics at slightly broader spatial scales. The spatial distribution of nest fates indicated that lesser snow goose nest proximity and density likely influence Canada goose nest fate. Our analyses of spatial point patterns suggested that continued changes in the distribution and abundance of breeding lesser snow geese on the Hudson Bay Lowlands may have impacts on the reproductive performance of Canada geese, and subsequently the spatial distribution of Canada goose nests. PMID:24312520

  1. Measuring floodplain spatial patterns using continuous surface metrics at multiple scales

    Science.gov (United States)

    Scown, Murray W.; Thoms, Martin C.; DeJager, Nathan R.

    2015-01-01

    Interactions between fluvial processes and floodplain ecosystems occur upon a floodplain surface that is often physically complex. Spatial patterns in floodplain topography have only recently been quantified over multiple scales, and discrepancies exist in how floodplain surfaces are perceived to be spatially organised. We measured spatial patterns in floodplain topography for pool 9 of the Upper Mississippi River, USA, using moving window analyses of eight surface metrics applied to a 1 × 1 m2 DEM over multiple scales. The metrics used were Range, SD, Skewness, Kurtosis, CV, SDCURV,Rugosity, and Vol:Area, and window sizes ranged from 10 to 1000 m in radius. Surface metric values were highly variable across the floodplain and revealed a high degree of spatial organisation in floodplain topography. Moran's I correlograms fit to the landscape of each metric at each window size revealed that patchiness existed at nearly all window sizes, but the strength and scale of patchiness changed within window size, suggesting that multiple scales of patchiness and patch structure exist in the topography of this floodplain. Scale thresholds in the spatial patterns were observed, particularly between the 50 and 100 m window sizes for all surface metrics and between the 500 and 750 m window sizes for most metrics. These threshold scales are ~ 15–20% and 150% of the main channel width (1–2% and 10–15% of the floodplain width), respectively. These thresholds may be related to structuring processes operating across distinct scale ranges. By coupling surface metrics, multi-scale analyses, and correlograms, quantifying floodplain topographic complexity is possible in ways that should assist in clarifying how floodplain ecosystems are structured.

  2. Spatial patterns and natural recruitment of native shrubs in a semi-arid sandy land.

    Science.gov (United States)

    Wu, Bo; Yang, Hongxiao

    2013-01-01

    Passive restoration depending on native shrubs is an attractive approach for restoring desertified landscapes in semi-arid sandy regions. We sought to understand the relationships between spatial patterns of native shrubs and their survival ability in sandy environments. Furthermore, we applied our results to better understand whether passive restoration is feasible for desertified landscapes in semi-arid sandy regions. The study was conducted in the semi-arid Mu Us sandy land of northern China with the native shrub Artemisia ordosica. We analyzed population structures and patterns of A. ordosica at the edges and centers of land patches where sand was stabilized by A. ordosica-dominated vegetation. Saplings were more aggregated than adults, and both were more aggregated at the patch edges than at the patch centers. At the patch edges, spatial association of the saplings with the adults was mostly positive at distances 0.3-6.6 m, and turned from positive to neutral, and even negative, at other distances. At the patch centers, the saplings were spaced almost randomly around the adults, and their distances from the adults did not seem to affect their locations. A greater number of A. ordosica individuals emerged at the patch edges than at the patch centers. Such patterns may have resulted from their integrative adjustment to specific conditions of soil water supply and sand drift intensity. These findings suggest that in semi-arid sandy regions, native shrubs that are well-adapted to local environments may serve as low-cost and competent ecological engineers that can promote the passive restoration of surrounding patches of mobile sandy land.

  3. Spatial and temporal patterns of deforestation in Rio Cajarí Extrative Reserve, Amapá, Brazil.

    Science.gov (United States)

    Funi, Claudia; Paese, Adriana

    2012-01-01

    The Rio Cajarí Extractive Reserve (RCER) is a sustainable use protected area located in Southern Amapá state, Brazil. This protected area is home to traditional agro-extractive families, but has been increasingly invaded by commercial agriculture producers. In this work, we test the hypothesis that the RCER implementation has distinctly affected spatial patterns of deforestation and rates of bare soil and secondary forest formation by the social groups occupying the protected area and its surrounding area. Detailed maps of vegetation cover and deforestation were elaborated, based on Landsat TM images from 1991, 1998, 2007 and 2008 and Linear Spectral Mixture Models. Based on an extensive fieldwork, patches were classified according to the agents causing deforestation and characterized with ten explanatory variables. A discriminant function analysis was used to identify homogeneous groups based on the data. Results show increased rates and distinct spatial patterns of deforestation by three groups: extractivists, non traditional commercial agriculture producers, and a less representative group constituted of miners, cattle and timber producers. In all analyzed dates, clearings by the extrativist community presented the highest total area and smaller average sizes and were located in close proximity to villages. Deforestation patches by the non-traditional group were exclusively associated with ombrophilous forests; these presented higher average sizes and proximity indexes, and showed increased aggregation and large cluster formation. No significant differences were observed in deforestation patterns by the three groups inside or outside the reserve.

  4. Spatial and seasonal distribution patterns of the ragged-tooth shark ...

    African Journals Online (AJOL)

    Catches from competitive shore-anglers, inshore boatbased anglers and sightings by spearfishers and divers were used to infer the spatial and seasonal movement patterns of young-of-the-year (2.4m TL) ragged-tooth sharks Carcharias taurus along ...

  5. Identification of two-phase flow pattern by using specific spatial frequency of differential pressure signal

    International Nuclear Information System (INIS)

    Han Bin; Tong Yunxian; Wu Shaorong

    1992-11-01

    It is a classical method by using analysis of differential pressure fluctuation signal to identify two-phase flow pattern. The method which uses trait peak in the frequency-domain will result confusion between bubble flow and intermittent flow due to the influence of gas speed. Considering the spatial geometric significance of two-phase slow patterns and using the differential pressure gauge as a sensor, the Strouhal number 'Sr' is taken as the basis for distinguishing flow patterns. Using Strouhal number 'Sr' to identify flow pattern has clear physical meaning. The experimental results using the spatial analytical technique to measure the flow pattern are also given

  6. Spatial diastereomer patterns of hexabromocyclododecane (HBCD) in a Norwegian fjord

    International Nuclear Information System (INIS)

    Haukas, Marianne; Hylland, Ketil; Berge, John Arthur; Nygard, Torgeir; Mariussen, Espen

    2009-01-01

    Hexabromocyclododecane (HBCD) is the third most used brominated flame retardant globally, and has been found widely distributed in the environment. The present study reports concentrations and spatial patterns of α, β and γ-HBCD in a contaminated Norwegian fjord. Intertidal surface sediment and selected species from the marine food web were sampled at five locations in increasing distance from a known point source of HBCD. All sediment and biota samples were analyzed for the three HBCD diastereomers by liquid chromatography and mass spectrometry (LC/MS). The results demonstrated a HBCD gradient with decreasing concentrations at increasing distance from the point source in sediment and sedentary species, but less so in the species with large feeding ranges. Mean concentrations of ΣHBCD at the closest/most remote locations relative to the point source were 9000/300 ng g -1 TOC in sediment and 150/90 ng g -1 lw in the species with largest feeding range (great black-backed gull). The HBCD diastereomer patterns were similar for each of the matrices (sediment, organisms) independent of distance from the source, indicating no difference in environmental partitioning between the diastereomers. However, the concentration ratio of diastereomers in each matrix ranged from 3:1:10 (α:β:γ) in the sediments to 55:1 (α:γ) in the highest trophic level species, suggesting diastereomer-specific bioaccumulation in the organisms.

  7. Spatial patterns of fish standing biomass across Brazilian reefs.

    Science.gov (United States)

    Morais, R A; Ferreira, C E L; Floeter, S R

    2017-12-01

    A large fish-count dataset from the Brazilian province was used to describe spatial patterns in standing biomass and test if total biomass, taxonomic and functional trophic structure vary across nested spatial scales. Taxonomic and functional structure varied more among localities and sites than among regions. Total biomass was generally higher at oceanic islands and remote or protected localities along the coast. Lower level carnivores comprised a large part of the biomass at almost all localities (mean of 44%), zooplanktivores never attained more than 14% and omnivores were more representative of subtropical reefs and oceanic islands (up to 66% of total biomass). Small and large herbivores and detritivores varied greatly in their contribution to total biomass, with no clear geographical patterns. Macrocarnivores comprised less than 12% of the biomass anywhere, except for two remote localities. Top predators, such as sharks and very large groupers, were rare and restricted to a few reefs, suggesting that their ecological function might have already been lost in many Brazilian reefs. © 2017 The Fisheries Society of the British Isles.

  8. Exploring the Ecological Coherence between the Spatial and Temporal Patterns of Bacterioplankton in Boreal Lakes

    Directory of Open Access Journals (Sweden)

    Juan Pablo Niño-García

    2017-04-01

    Full Text Available One of the major contemporary challenges in microbial ecology has been to discriminate the reactive core from the random, unreactive components of bacterial communities. In previous work we used the spatial abundance distributions of bacterioplankton across boreal lakes of Québec to group taxa into four distinct categories that reflect either hydrology-mediated dispersal along the aquatic network or environmental selection mechanisms within lakes. Here, we test whether this categorization derived from the spatial distribution of taxa is maintained over time, by analyzing the temporal dynamics of the operational taxonomic units (OTUs within those spatially derived categories along an annual cycle in the oligotrophic lake Croche (Québec, Canada, and assessing the coherence in the patterns of abundance, occurrence, and environmental range of these OTUs over space and time. We report that the temporal dynamics of most taxa within a single lake are largely coherent with those derived from their spatial distribution over large spatial scales, suggesting that these properties must be intrinsic of particular taxa. We also identified a set of rare taxa cataloged as having a random occupancy based on their spatial distribution, but which showed clear seasonality and abundance peaks along the year, yet these comprised a very small fraction of the total rare OTUs. We conclude that the presence of most rare bacterioplankton taxa in boreal lakes is random, since both their temporal and spatial dynamics suggest links to passive downstream transport and persistence in freshwater networks, rather than environmental selection.

  9. Spatial patterns of dengue cases in Brazil.

    Directory of Open Access Journals (Sweden)

    Fernando Jose Antonio

    Full Text Available Dengue infection plays a central role in our society, since it is the most prevalent vector-borne viral disease affecting humans. We statistically investigated patterns concerning the spatial spreading of dengue epidemics in Brazil, as well as their temporal evolution in all Brazilian municipalities for a period of 12 years. We showed that the distributions of cases in municipalities follow power laws persistent in time and that the infection scales linearly with the population of the municipalities. We also found that the average number of dengue cases does not have a clear dependence on the longitudinal position of municipalities. On the other hand, we found that the average distribution of cases varies with the latitudinal position of municipalities, displaying an almost constant growth from high latitudes until reaching the Tropic of Capricorn leveling to a plateau closer to the Equator. We also characterized the spatial correlation of the number of dengue cases between pairs of municipalities, where our results showed that the spatial correlation function decays with the increase of distance between municipalities, following a power-law with an exponential cut-off. This regime leads to a typical dengue traveling distance. Finally, we considered modeling this last behaviour within the framework of a Edwards-Wilkinson equation with a fractional derivative on space.

  10. URBAN LANDSCAPE SPATIAL PATTERN ESTIMATION OF CITIES IN SHANDONG PROVINCE USING NIGHTTIME LUMINOSITY DATA

    Directory of Open Access Journals (Sweden)

    J. Fan

    2017-09-01

    Full Text Available China’s cities have been undergoing rapid and intense urbanization processes in the past few decades. Shandong is a coastal province which is located in East China with big economy and population scales, and which also plays an important role in the rapid process of China’s modernization. The DMSP/OLS dataset has been widely used for the urban development assessments in long time-series and large spatial scales situations. In this paper, we used a time series of nighttime light data to estimate the landscape spatial pattern changes of cities in Shandong province from 1994 to 2012. Nine landscape metrics were calculated and analyzed to figure out the spatial patterns of urban area developments of the cities in Shandong province. The landscape metrics include the number of patches (NP, the landscape total area (TA, the aggregation index (AI, the largest patch index (LPI, the mean patch area (AREA_MN, the landscape shape index (LSI, the total edge length (TE, the edge density (ED, and the mean radius of gyration (GYRATE_MN. The experimental results reveal that, in 1994–2012, the total urban area of cities in Shandong province expanded for 1.17 times, the average urban area increased by about 93.00%, the average annual growth rate of the TE metric is 2.67 %, while the ED metric decreased about 1.44 % annually. Bigger cities in this area show relative slower urbanization development processes, such as Jinan and Qingdao. Coastal cities represented much more rapid expansion velocities than inland cities. In the middle area of Shandong province, the connectivity between developed urban areas was constantly increased.

  11. Urban Landscape Spatial Pattern Estimation of Cities in Shandong Province Using Nighttime Luminosity Data

    Science.gov (United States)

    Fan, J.; He, H.; Hu, T.; Li, G.; Gao, H.; Zhao, X.

    2017-09-01

    China's cities have been undergoing rapid and intense urbanization processes in the past few decades. Shandong is a coastal province which is located in East China with big economy and population scales, and which also plays an important role in the rapid process of China's modernization. The DMSP/OLS dataset has been widely used for the urban development assessments in long time-series and large spatial scales situations. In this paper, we used a time series of nighttime light data to estimate the landscape spatial pattern changes of cities in Shandong province from 1994 to 2012. Nine landscape metrics were calculated and analyzed to figure out the spatial patterns of urban area developments of the cities in Shandong province. The landscape metrics include the number of patches (NP), the landscape total area (TA), the aggregation index (AI), the largest patch index (LPI), the mean patch area (AREA_MN), the landscape shape index (LSI), the total edge length (TE), the edge density (ED), and the mean radius of gyration (GYRATE_MN). The experimental results reveal that, in 1994-2012, the total urban area of cities in Shandong province expanded for 1.17 times, the average urban area increased by about 93.00%, the average annual growth rate of the TE metric is 2.67 %, while the ED metric decreased about 1.44 % annually. Bigger cities in this area show relative slower urbanization development processes, such as Jinan and Qingdao. Coastal cities represented much more rapid expansion velocities than inland cities. In the middle area of Shandong province, the connectivity between developed urban areas was constantly increased.

  12. Spatial patterns and morphology of termite (Macrotermes falciger) mounds in the upper Katanga, D.R. Congo

    NARCIS (Netherlands)

    Mujinya, B.B.; Adam, M.Y.O.; Mees, F.; Bogaert, J.; Vranken, I.; Erens, H.; Baert, G.; Ngongo, M.; Ranst, van E.

    2014-01-01

    This study examines the spatial distribution patterns and morphological characteristics of Macrotermes falciger mounds in the peri-urban zone of Lubumbashi, D.R. Congo. Spatial patterns of mounds were assessed using high-resolution satellite images for 24 plots of variable size (3 to 27 ha). Soil

  13. Historical Patterns and Drivers of Spatial Changes in Recreational Fishing Activity in Puget Sound, Washington.

    Directory of Open Access Journals (Sweden)

    Anne H Beaudreau

    Full Text Available Small-scale fisheries are the primary users of many coastal fish stocks; yet, spatial and temporal patterns of recreational and subsistence fishing in coastal marine ecosystems are poorly documented. Knowledge about the spatial distribution of fishing activities can inform place-based management that balances species conservation with opportunities for recreation and subsistence. We used a participatory mapping approach to document changes in spatial fishing patterns of 80 boat-based recreational anglers from 1950 to 2010 in Puget Sound, Washington, USA. Hand-drawn fishing areas for salmon, rockfishes, flatfishes, and crabs were digitized and analyzed in a Geographic Information System. We found that recreational fishing has spanned the majority of Puget Sound since the 1950s, with the heaviest use limited to small areas of central and northern Puget Sound. People are still fishing in the same places they were decades ago, with relatively little change in specific locations despite widespread declines in salmon and bottomfish populations during the second half of the 20th century. While the location of core fishing areas remained consistent, the size of those areas and intensity of use changed over time. The size of fishing areas increased through the 2000s for salmon but declined after the 1970s and 1980s for rockfishes, flatfishes, and crabs. Our results suggest that the spatial extent of recreational bottomfishing increased after the 1960s, when the availability of motorized vessels and advanced fish-finding technologies allowed anglers to expand their scope beyond localized angling from piers and boathouses. Respondents offered a wide range of reasons for shifts in fishing areas over time, reflecting substantial individual variation in motivations and behaviors. Changes in fishing areas were most commonly attributed to changes in residence and declines in target species and least tied to fishery regulations, despite the implementation of at

  14. Historical Patterns and Drivers of Spatial Changes in Recreational Fishing Activity in Puget Sound, Washington

    Science.gov (United States)

    Beaudreau, Anne H.; Whitney, Emily J.

    2016-01-01

    Small-scale fisheries are the primary users of many coastal fish stocks; yet, spatial and temporal patterns of recreational and subsistence fishing in coastal marine ecosystems are poorly documented. Knowledge about the spatial distribution of fishing activities can inform place-based management that balances species conservation with opportunities for recreation and subsistence. We used a participatory mapping approach to document changes in spatial fishing patterns of 80 boat-based recreational anglers from 1950 to 2010 in Puget Sound, Washington, USA. Hand-drawn fishing areas for salmon, rockfishes, flatfishes, and crabs were digitized and analyzed in a Geographic Information System. We found that recreational fishing has spanned the majority of Puget Sound since the 1950s, with the heaviest use limited to small areas of central and northern Puget Sound. People are still fishing in the same places they were decades ago, with relatively little change in specific locations despite widespread declines in salmon and bottomfish populations during the second half of the 20th century. While the location of core fishing areas remained consistent, the size of those areas and intensity of use changed over time. The size of fishing areas increased through the 2000s for salmon but declined after the 1970s and 1980s for rockfishes, flatfishes, and crabs. Our results suggest that the spatial extent of recreational bottomfishing increased after the 1960s, when the availability of motorized vessels and advanced fish-finding technologies allowed anglers to expand their scope beyond localized angling from piers and boathouses. Respondents offered a wide range of reasons for shifts in fishing areas over time, reflecting substantial individual variation in motivations and behaviors. Changes in fishing areas were most commonly attributed to changes in residence and declines in target species and least tied to fishery regulations, despite the implementation of at least 25 marine

  15. ANALYSIS ON THE DYNAMICS OF SPATIAL DISTRIBUTION PATTERN OF MIXED SPIDER POPULATION IN RICE FIELD

    Institute of Scientific and Technical Information of China (English)

    ZhiWang; Zhe-mingYuan; Da-xiangSong; Ming-shengZhu

    2004-01-01

    The results make it clear that there are total 11 families, 29 genera and 43 species of spiders in the rice field of Dong Fang Hong Farm. Among them, there are 8 families, 19 genera and 28 species in the early rice field, and 10 families, 27 genera and 36 species in the late rice field. The spatial distribution pattern of mixed spider populations in rice fields was different during different development stages of rice plant. During the prophase, metaphase and anaphase of early rice plant development, the spatial distribution pattern of mixed spider populations was aggregative, random and aggregative respectively. During the prophase, metaphase and anaphase of late rice plant development, the spatial distribution pattern was uniform, aggregative and uniform respectively.

  16. [Spatial point pattern analysis of main trees and flowering Fargesia qinlingensis in Abies fargesii forests in Mt Taibai of the Qinling Mountains, China].

    Science.gov (United States)

    Li, Guo Chun; Song, Hua Dong; Li, Qi; Bu, Shu Hai

    2017-11-01

    In Abies fargesii forests of the giant panda's habitats in Mt. Taibai, the spatial distribution patterns and interspecific associations of main tree species and their spatial associations with the understory flowering Fargesia qinlingensis were analyzed at multiple scales by univariate and bivaria-te O-ring function in point pattern analysis. The results showed that in the A. fargesii forest, the number of A. fargesii was largest but its population structure was in decline. The population of Betula platyphylla was relatively young, with a stable population structure, while the population of B. albo-sinensis declined. The three populations showed aggregated distributions at small scales and gradually showed random distributions with increasing spatial scales. Spatial associations among tree species were mainly showed at small scales and gradually became not spatially associated with increasing scale. A. fargesii and B. platyphylla were positively associated with flowering F. qinlingensis at large and medium scales, whereas B. albo-sinensis showed negatively associated with flowering F. qinlingensis at large and medium scales. The interaction between trees and F. qinlingensis in the habitats of giant panda promoted the dynamic succession and development of forests, which changed the environment of giant panda's habitats in Qinling.

  17. Changes in spatial patterns of Caragana stenophylla along a climatic drought gradient on the Inner Mongolian Plateau.

    Science.gov (United States)

    Xie, Li-Na; Guo, Hong-Yu; Gabler, Christopher A; Li, Qing-Fang; Ma, Cheng-Cang

    2015-01-01

    Few studies have investigated the influence of water availability on plant population spatial patterns. We studied changes in the spatial patterns of Caragana stenophylla along a climatic drought gradient within the Inner Mongolian Plateau, China. We examined spatial patterns, seed density, "nurse effects" of shrubs on seedlings, transpiration rates and water use efficiency (WUE) of C. stenophylla across semi-arid, arid, and intensively arid zones. Our results showed that patches of C. stenophylla populations shifted from a random to a clumped spatial pattern towards drier environments. Seed density and seedling survival rate of C. stenophylla decreased from the semi-arid zone to the intensively arid zone. Across the three zones, there were more C. stenophylla seeds and seedlings underneath shrub canopies than outside shrub canopies; and in the intensively arid zone, there were almost no seeds or seedlings outside shrub canopies. Transpiration rates of outer-canopy leaves and WUE of both outer-canopy and inner-canopy leaves increased from the semi-arid zone to the intensively arid zone. In the intensively arid zone, transpiration rates and WUE of inner-canopy leaves were significantly lower and higher, respectively, than those of outer-canopy leaves. We conclude that, as drought stress increased, seed density decreased, seed proportions inside shrubs increased, and "nurse effects" of shrubs on seedlings became more important. These factors, combined with water-saving characteristics associated with clumped spatial patterns, are likely driving the changes in C. stenophylla spatial patterns.

  18. Long-term mortality rates and spatial patterns in an old-growth forest

    Science.gov (United States)

    Emily J. Silver; Shawn Fraver; Anthony W. D' Amato; Tuomas Aakala; Brian J. Palik

    2013-01-01

    Understanding natural mortality patterns and processes of forest tree species is increasingly important given projected changes in mortality owing to global change. With this need in mind, the rate and spatial pattern of mortality was assessed over an 89-year period in a natural-origin Pinus resinosa (Aiton)-dominated system to assess these processes...

  19. Spatial and temporal patterns of cloud cover and fog inundation in coastal California: Ecological implications

    Science.gov (United States)

    Rastogi, Bharat; Williams, A. Park; Fischer, Douglas T.; Iacobellis, Sam F.; McEachern, A. Kathryn; Carvalho, Leila; Jones, Charles Leslie; Baguskas, Sara A.; Still, Christopher J.

    2016-01-01

    The presence of low-lying stratocumulus clouds and fog has been known to modify biophysical and ecological properties in coastal California where forests are frequently shaded by low-lying clouds or immersed in fog during otherwise warm and dry summer months. Summer fog and stratus can ameliorate summer drought stress and enhance soil water budgets, and often have different spatial and temporal patterns. Here we use remote sensing datasets to characterize the spatial and temporal patterns of cloud cover over California’s northern Channel Islands. We found marine stratus to be persistent from May through September across the years 2001-2012. Stratus clouds were both most frequent and had the greatest spatial extent in July. Clouds typically formed in the evening, and dissipated by the following early afternoon. We present a novel method to downscale satellite imagery using atmospheric observations and discriminate patterns of fog from those of stratus and help explain patterns of fog deposition previously studied on the islands. The outcomes of this study contribute significantly to our ability to quantify the occurrence of coastal fog at biologically meaningful spatial and temporal scales that can improve our understanding of cloud-ecosystem interactions, species distributions and coastal ecohydrology.

  20. Spatial pattern affects diversity-productivity relationships in experimental meadow communities

    Science.gov (United States)

    Lamošová, Tereza; Doležal, Jiří; Lanta, Vojtěch; Lepš, Jan

    2010-05-01

    Plant species create aggregations of conspecifics as a consequence of limited seed dispersal, clonal growth and heterogeneous environment. Such intraspecific aggregation increases the importance of intraspecific competition relative to interspecific competition which may slow down competitive exclusion and promote species coexistence. To examine how spatial aggregation impacts the functioning of experimental assemblages of varying species richness, eight perennial grassland species of different growth form were grown in random and aggregated patterns in monocultures, two-, four-, and eight-species mixtures. In mixtures with an aggregated pattern, monospecific clumps were interspecifically segregated. Mixed model ANOVA was used to test (i) how the total productivity and productivity of individual species is affected by the number of species in a mixture, and (ii) how these relationships are affected by spatial pattern of sown plants. The main patterns of productivity response to species richness conform to other studies: non-transgressive overyielding is omnipresent (the productivity of mixtures is higher than the average of its constituent species so that the net diversity, selection and complementarity effects are positive), whereas transgressive overyielding is found only in a minority of cases (average of log(overyielding) being close to zero or negative). The theoretical prediction that plants in a random pattern should produce more than in an aggregated pattern (the distances to neighbours are smaller and consequently the competition among neighbours stronger) was confirmed in monocultures of all the eight species. The situation is more complicated in mixtures, probably as a consequence of complicated interplay between interspecific and intraspecific competition. The most productive species ( Achillea, Holcus, Plantago) were competitively superior and increased their relative productivity with mixture richness. The intraspecific competition of these species is

  1. Exploring the Linkage between Urban Flood Risk and Spatial Patterns in Small Urbanized Catchments of Beijing, China

    Directory of Open Access Journals (Sweden)

    Lei Yao

    2017-02-01

    Full Text Available In the context of global urbanization, urban flood risk in many cities has become a serious environmental issue, threatening the health of residents and the environment. A number of hydrological studies have linked urban flooding issues closely to the spectrum of spatial patterns of urbanization, but relatively little attention has been given to small-scale catchments within the realm of urban systems. This study aims to explore the hydrological effects of small-scaled urbanized catchments assigned with various landscape patterns. Twelve typical residential catchments in Beijing were selected as the study areas. Total Impervious Area (TIA, Directly Connected Impervious Area (DCIA, and a drainage index were used as the catchment spatial metrics. Three scenarios were designed as different spatial arrangement of catchment imperviousness. Runoff variables including total and peak runoff depth (Qt and Qp were simulated by using Strom Water Management Model (SWMM. The relationship between catchment spatial patterns and runoff variables were determined, and the results demonstrated that, spatial patterns have inherent influences on flood risks in small urbanized catchments. Specifically: (1 imperviousness acts as an effective indicator in affecting both Qt and Qp; (2 reducing the number of rainwater inlets appropriately will benefit the catchment peak flow mitigation; (3 different spatial concentrations of impervious surfaces have inherent influences on Qp. These findings provide insights into the role of urban spatial patterns in driving rainfall-runoff processes in small urbanized catchments, which is essential for urban planning and flood management.

  2. Exploring the Linkage between Urban Flood Risk and Spatial Patterns in Small Urbanized Catchments of Beijing, China

    Science.gov (United States)

    Yao, Lei; Chen, Liding; Wei, Wei

    2017-01-01

    In the context of global urbanization, urban flood risk in many cities has become a serious environmental issue, threatening the health of residents and the environment. A number of hydrological studies have linked urban flooding issues closely to the spectrum of spatial patterns of urbanization, but relatively little attention has been given to small-scale catchments within the realm of urban systems. This study aims to explore the hydrological effects of small-scaled urbanized catchments assigned with various landscape patterns. Twelve typical residential catchments in Beijing were selected as the study areas. Total Impervious Area (TIA), Directly Connected Impervious Area (DCIA), and a drainage index were used as the catchment spatial metrics. Three scenarios were designed as different spatial arrangement of catchment imperviousness. Runoff variables including total and peak runoff depth (Qt and Qp) were simulated by using Strom Water Management Model (SWMM). The relationship between catchment spatial patterns and runoff variables were determined, and the results demonstrated that, spatial patterns have inherent influences on flood risks in small urbanized catchments. Specifically: (1) imperviousness acts as an effective indicator in affecting both Qt and Qp; (2) reducing the number of rainwater inlets appropriately will benefit the catchment peak flow mitigation; (3) different spatial concentrations of impervious surfaces have inherent influences on Qp. These findings provide insights into the role of urban spatial patterns in driving rainfall-runoff processes in small urbanized catchments, which is essential for urban planning and flood management. PMID:28264521

  3. Linking the spatial patterns of organisms and abiotic factors to ecosystem function and management: insights from semi-arid environments

    Directory of Open Access Journals (Sweden)

    F. T. Maestre

    2006-12-01

    Full Text Available Numerous theoretical and modeling studies have demonstrated the ecological significance of the spatial patterning of organisms on ecosystem functioning and dynamics. However, there is a paucity of empirical evidence that quantitatively shows how changes in the spatial patterns of the organisms forming biotic communities are directly related to ecosystem structure and functioning. In this article, I review a series of experiments and observational studies conducted in semi-arid environments from Spain (degraded calcareous shrubland, steppes dominated by Stipa tenacissima, and gypsum shrublands to: 1 evaluate whether the spatial patterns of the dominant biotic elements in the community are linked to ecosystem structure and functioning, and 2 test if these patterns, and those of abiotic factors, can be used to improve ecosystem restoration. In the semiarid steppes we found a significant positive relationship between the spatial pattern of the perennial plant community and: i the water status of S. tenacissima and ii perennial species richness and diversity. Experimental plantings conducted in these steppes showed that S. tenacissima facilitated the establishment of shrub seedlings, albeit the magnitude and direction of this effect was dependent on rainfall conditions during the first yr after planting. In the gypsum shrubland, a significant, direct relationship between the spatial pattern of the biological soil crusts and surrogates of ecosystem functioning (soil bulk density and respiration was found. In a degraded shrubland with very low vegetation cover, the survival of an introduced population of the shrub Pistacia lentiscus showed marked spatial patterns, which were related to the spatial patterns of soil properties such as soil compaction and sand content. These results provide empirical evidence on the importance of spatial patterns for maintaining ecosystem structure and functioning in semi-arid ecosystems

  4. Reconstruction of paleoenvironments by analyzing spatial shell orientation

    Science.gov (United States)

    Lukeneder, Susanne; Lukeneder, Alexander; Weber, Gerhard W.; Exner, Ulrike

    2013-04-01

    one side of the shell (transverse axis) was measured (landmark s & c). Spatial orientation was characterized by dip and dip direction of the longitudinal axis, as well as by strike and azimuth of a plane defined by both axes. The exact spatial orientation data was determined for a sample of 699 ammonoids within the bed and statistically analyzed. The results provide a hint on the geodynamic processes (paleocurrents), depositional conditions (allochthonous or autochthonous) and other general information about the ancient environment. The method can be adapted for other mass-occurring fossils and thus represents a good template for studies of topographical paleoenvironmental factors. References: Flügel, E. 2004. Microfacies of carbonate rocks. Analysis, Interpretation and Application. Springer, Berlin Heidelberg New York, p.182. Lukeneder S., Lukeneder A., Harzhauser M., Islamoglu Y., Krystyn L., Lein R. 2012. A delayed carbonate factory breakdown during the Tethyan-wide Carnian Pluvial Episode along the Cimmerian terranes (Taurus, Turkey). Facies 58: 279-296.

  5. Pattern recognition neural-net by spatial mapping of biology visual field

    Science.gov (United States)

    Lin, Xin; Mori, Masahiko

    2000-05-01

    The method of spatial mapping in biology vision field is applied to artificial neural networks for pattern recognition. By the coordinate transform that is called the complex-logarithm mapping and Fourier transform, the input images are transformed into scale- rotation- and shift- invariant patterns, and then fed into a multilayer neural network for learning and recognition. The results of computer simulation and an optical experimental system are described.

  6. OpenMSI Arrayed Analysis Toolkit: Analyzing Spatially Defined Samples Using Mass Spectrometry Imaging

    DEFF Research Database (Denmark)

    de Raad, Markus; de Rond, Tristan; Rübel, Oliver

    2017-01-01

    ://openmsinersc.gov), a platform for storing, sharing, and analyzing MSI data. By using a web-based python notebook (Jupyter), OMAAT is accessible to anyone without programming experience yet allows experienced users to leverage all features. OMAAT was :evaluated by analyzing an MSI data set of a high-throughput glycoside...... processing tools for the analysis of large arrayed MSI sample sets. The OpenMSI Arrayed Analysis Toolkit (OMAAT) is a software package that addresses the challenges of analyzing spatially defined samples in MSI data sets. OMAAT is written in Python and is integrated with OpenMSI (http...

  7. Spatial pattern in Antarctica: what can we learn from Antarctic bacterial isolates?

    Science.gov (United States)

    Chong, Chun Wie; Goh, Yuh Shan; Convey, Peter; Pearce, David; Tan, Irene Kit Ping

    2013-09-01

    A range of small- to moderate-scale studies of patterns in bacterial biodiversity have been conducted in Antarctica over the last two decades, most suggesting strong correlations between the described bacterial communities and elements of local environmental heterogeneity. However, very few of these studies have advanced interpretations in terms of spatially associated patterns, despite increasing evidence of patterns in bacterial biogeography globally. This is likely to be a consequence of restricted sampling coverage, with most studies to date focusing only on a few localities within a specific Antarctic region. Clearly, there is now a need for synthesis over a much larger spatial to consolidate the available data. In this study, we collated Antarctic bacterial culture identities based on the 16S rRNA gene information available in the literature and the GenBank database (n > 2,000 sequences). In contrast to some recent evidence for a distinct Antarctic microbiome, our phylogenetic comparisons show that a majority (~75 %) of Antarctic bacterial isolates were highly similar (≥99 % sequence similarity) to those retrieved from tropical and temperate regions, suggesting widespread distribution of eurythermal mesophiles in Antarctic environments. However, across different Antarctic regions, the dominant bacterial genera exhibit some spatially distinct diversity patterns analogous to those recently proposed for Antarctic terrestrial macroorganisms. Taken together, our results highlight the threat of cross-regional homogenisation in Antarctic biodiversity, and the imperative to include microbiota within the framework of biosecurity measures for Antarctica.

  8. ANALYSIS OF SPATIAL PATTERN AND INFLUENCING FACTORS OF E-COMMERCE

    Directory of Open Access Journals (Sweden)

    Y. Zhang

    2017-09-01

    Full Text Available This paper aims to study the relationship between e-commerce development and geographical characteristics using data of e-commerce, economy, Internet, express delivery and population from 2011 to 2015. Moran’s I model and GWR model are applied to analyze the spatial pattern of E-commerce and its influencing factors. There is a growth trend of e-commerce from west to east, and it is obvious to see that e-commerce development has a space-time clustering, especially around the Yangtze River delta. The comprehensive factors caculated through PCA are described as fundamental social productivity, resident living standard and population sex structure. The first two factors have positive correlation with e-commerce, and the intensity of effect increases yearly. However, the influence of population sex structure on the E-commerce development is not significant. Our results suggest that the clustering of e-commerce has a downward trend and the impact of driving factors on e-commerce is observably distinct from year to year in space.

  9. Analysis of extent and spatial pattern change of mangrove ecosystem in Mangunharjo Sub-district from 2007 to 2017

    Science.gov (United States)

    Nugraha, S. B.; Sidiq, W. A. B. N.; Setyowati, D. L.; Martuti, N. K. T.

    2018-03-01

    This study aims to determine changes in the extent and spatial patterns of mangrove ecosystems in Mangunharjo Sub-district from 2007, 2012 and 2017. The main data source of this research is Digital Globe Imagery of Mangunharjo Sub-district and surrounding area. The extent and spatial pattern of the mangrove ecosystem were obtained from visual interpretation result of the time series image and accuracy tested with field survey data, and then the analysis was conducted quantitatively and qualitatively. The result of time series data analysis shows that there is an enhancement of mangrove forest area in Mangunharjo Sub-district from 2007-2017. In the first five years (2007-2012), the area of mangrove ecosystem increased from 9.01 Ha to 19.78 Ha, and then in the next five years (2012-2017), it was increased significantly from 19.78 Ha to 68.47 Ha. If analyzed from the spatial pattern, in 2007-2012 the mangrove ecosystems were distributed extends along the river border ponds, while in 2012-2017 it already clustered to form a certain area located at the estuary. The increasing of mangrove area in Mangunharjo Sub-district is a result of hard work with various parties, from the government institution, individual and company which launched mangrove ecosystem recovery program especially in the coastal area of Semarang City. With the better mangrove ecosystem is expected to help restore and prevent the occurrence of environmental damage in the coastal area of Semarang City due to abrasion, seawater intrusion, and tidal flood.

  10. Geophysical characterization of soil moisture spatial patterns in a tillage experiment

    Science.gov (United States)

    Martinez, G.; Vanderlinden, K.; Giráldez, J. V.; Muriel, J. L.

    2009-04-01

    Knowledge on the spatial soil moisture pattern can improve the characterisation of the hydrological response of either field-plots or small watersheds. Near-surface geophysical methods, such as electromagnetic induction (EMI), provide a means to map such patterns using non-invasive and non-destructive measurements of the soil apparent electrical conductivity (ECa. In this study ECa was measured using an EMI sensor and used to characterize spatially the hydrologic response of a cropped field to an intense shower. The study site is part of a long-term tillage experiment in Southern Spain in which Conventional Tillage (CT), Direct Drilling (DD) and Minimum Tillage (MT) are being evaluated since 1982. Soil ECa was measured before and after a rain event of 115 mm, near the soil surface and at deeper depth (ECas and ECad, respectively) using the EM38-DD EMI sensor. Simultaneously, elevation data were collected at each sampling point to generate a Digital Elevation Model (DEM). Soil moisture during the first survey was close to permanent wilting point and near field capacity during the second survey. For the first survey, both ECas and ECad, were higher in the CT and MT than in the DD plots. After the rain event, rill erosion appeared only in CT and MT plots were soil was uncovered, matching the drainage lines obtained from the DEM. Apparent electrical conductivity increased all over the field plot with higher increments in the DD plots. These plots showed the highest ECas and ECad values, in contrast to the spatial pattern found during the first sampling. Difference maps obtained from the two ECas and ECad samplings showed a clear difference between DD plots and CT and MT plots due to their distinct hydrologic response. Water infiltration was higher in the soil of the DD plots than in the MT and CT plots, as reflected by their ECad increment. Higher ECa increments were observed in the depressions of the terrain, where water and sediments accumulated. On the contrary, the

  11. Fragmentation patterns of evergreen oak woodlands in Southwestern Iberia: identifying key spatial indicators.

    Science.gov (United States)

    Costa, Augusta; Madeira, Manuel; Lima Santos, José; Plieninger, Tobias; Seixas, Júlia

    2014-01-15

    Mediterranean evergreen oak woodlands (composed of Quercus suber L. and Quercus rotundifolia Lam.) are becoming increasingly fragmented in the human-modified landscapes of Southwestern Portugal and Spain. Previous studies have largely neglected to assess the spatial changes of oak woodlands in relation to their surrounding landscape matrix, and to characterize and quantify woodland boundaries and edges. The present study aims to fill this gap by analyzing fragmentation patterns of oak woodlands over a 50-year period (1958-2007) in three landscapes. Using archived aerial imagery from 1958, 1995 and 2007, for two consecutive periods (1958-1995 and 1995-2007), we calculated a set of landscape metrics to compare woodland fragmentation over time. Our results indicated a continuous woodland fragmentation characterized by their edge dynamics. From 1958 to 2007, the replacement of open farmland by shrubland and by new afforestation areas in the oak woodland landscape surrounding matrix, led to the highest values for edge contrast length trends of 5.0 and 12.3, respectively. Linear discriminant analysis was performed to delineate fragmented woodland structures and identify metric variables that characterize woodland spatial configuration. The edge contrast length with open farmland showed a strong correlation with F1 (correlations ranging between 0.55 and 0.98) and may be used as a proxy for oak woodland mixedness in landscape matrix. The edge dynamics of oak woodlands may result in different patterns of oak recruitment and therefore, its study may be helpful in highlighting future baselines for the sustainable management of oak woodlands. Copyright © 2013 Elsevier Ltd. All rights reserved.

  12. Spatial-temporal-spectral EEG patterns of BOLD functional network connectivity dynamics

    Science.gov (United States)

    Lamoš, Martin; Mareček, Radek; Slavíček, Tomáš; Mikl, Michal; Rektor, Ivan; Jan, Jiří

    2018-06-01

    Objective. Growing interest in the examination of large-scale brain network functional connectivity dynamics is accompanied by an effort to find the electrophysiological correlates. The commonly used constraints applied to spatial and spectral domains during electroencephalogram (EEG) data analysis may leave part of the neural activity unrecognized. We propose an approach that blindly reveals multimodal EEG spectral patterns that are related to the dynamics of the BOLD functional network connectivity. Approach. The blind decomposition of EEG spectrogram by parallel factor analysis has been shown to be a useful technique for uncovering patterns of neural activity. The simultaneously acquired BOLD fMRI data were decomposed by independent component analysis. Dynamic functional connectivity was computed on the component’s time series using a sliding window correlation, and between-network connectivity states were then defined based on the values of the correlation coefficients. ANOVA tests were performed to assess the relationships between the dynamics of between-network connectivity states and the fluctuations of EEG spectral patterns. Main results. We found three patterns related to the dynamics of between-network connectivity states. The first pattern has dominant peaks in the alpha, beta, and gamma bands and is related to the dynamics between the auditory, sensorimotor, and attentional networks. The second pattern, with dominant peaks in the theta and low alpha bands, is related to the visual and default mode network. The third pattern, also with peaks in the theta and low alpha bands, is related to the auditory and frontal network. Significance. Our previous findings revealed a relationship between EEG spectral pattern fluctuations and the hemodynamics of large-scale brain networks. In this study, we suggest that the relationship also exists at the level of functional connectivity dynamics among large-scale brain networks when no standard spatial and spectral

  13. The effect of spatial planning patterns on distribution of pedestrians ...

    African Journals Online (AJOL)

    This study focuses on public spaces of residential neighbourhoods in the City of Nairobi. It establishes various spatial characteristics, hence patterns, that have a bearing on the distribution of pedestrians therein. A higher encounter rate of pedestrians is a desirable public space quality given that the higher degree of ...

  14. Emerging spatial patterns in Antarctic prokaryotes.

    Science.gov (United States)

    Chong, Chun-Wie; Pearce, David A; Convey, Peter

    2015-01-01

    . Based on our synthesis, it is clear that spatial patterns of Antarctic prokaryotes can be unique at local scales, while the limited evidence available to date supports the group exhibiting overall regional biogeographical patterns similar to the eukaryotes. We further consider the applicability of the concept of "functional redundancy" for the Antarctic microbial community and highlight the requirements for proper consideration of their important and distinctive roles in Antarctic terrestrial ecosystems.

  15. Shifting patterns of Aedes aegypti fine scale spatial clustering in Iquitos, Peru.

    Science.gov (United States)

    LaCon, Genevieve; Morrison, Amy C; Astete, Helvio; Stoddard, Steven T; Paz-Soldan, Valerie A; Elder, John P; Halsey, Eric S; Scott, Thomas W; Kitron, Uriel; Vazquez-Prokopec, Gonzalo M

    2014-08-01

    Empiric evidence shows that Aedes aegypti abundance is spatially heterogeneous and that some areas and larval habitats produce more mosquitoes than others. There is a knowledge gap, however, with regards to the temporal persistence of such Ae. aegypti abundance hotspots. In this study, we used a longitudinal entomologic dataset from the city of Iquitos, Peru, to (1) quantify the spatial clustering patterns of adult Ae. aegypti and pupae counts per house, (2) determine overlap between clusters, (3) quantify the temporal stability of clusters over nine entomologic surveys spaced four months apart, and (4) quantify the extent of clustering at the household and neighborhood levels. Data from 13,662 household entomological visits performed in two Iquitos neighborhoods differing in Ae. aegypti abundance and dengue virus transmission was analyzed using global and local spatial statistics. The location and extent of Ae. aegypti pupae and adult hotspots (i.e., small groups of houses with significantly [pentomologic surveys. The extent of clustering was used to quantify the probability of finding spatially correlated populations. Our analyses indicate that Ae. aegypti distribution was highly focal (most clusters do not extend beyond 30 meters) and that hotspots of high vector abundance were common on every survey date, but they were temporally unstable over the period of study. Our findings have implications for understanding Ae. aegypti distribution and for the design of surveillance and control activities relying on household-level data. In settings like Iquitos, where there is a relatively low percentage of Ae. aegypti in permanent water-holding containers, identifying and targeting key premises will be significantly challenged by shifting hotspots of Ae. aegypti infestation. Focusing efforts in large geographic areas with historically high levels of transmission may be more effective than targeting Ae. aegypti hotspots.

  16. Shifting patterns of Aedes aegypti fine scale spatial clustering in Iquitos, Peru.

    Directory of Open Access Journals (Sweden)

    Genevieve LaCon

    2014-08-01

    Full Text Available Empiric evidence shows that Aedes aegypti abundance is spatially heterogeneous and that some areas and larval habitats produce more mosquitoes than others. There is a knowledge gap, however, with regards to the temporal persistence of such Ae. aegypti abundance hotspots. In this study, we used a longitudinal entomologic dataset from the city of Iquitos, Peru, to (1 quantify the spatial clustering patterns of adult Ae. aegypti and pupae counts per house, (2 determine overlap between clusters, (3 quantify the temporal stability of clusters over nine entomologic surveys spaced four months apart, and (4 quantify the extent of clustering at the household and neighborhood levels.Data from 13,662 household entomological visits performed in two Iquitos neighborhoods differing in Ae. aegypti abundance and dengue virus transmission was analyzed using global and local spatial statistics. The location and extent of Ae. aegypti pupae and adult hotspots (i.e., small groups of houses with significantly [p<0.05] high mosquito abundance were calculated for each of the 9 entomologic surveys. The extent of clustering was used to quantify the probability of finding spatially correlated populations. Our analyses indicate that Ae. aegypti distribution was highly focal (most clusters do not extend beyond 30 meters and that hotspots of high vector abundance were common on every survey date, but they were temporally unstable over the period of study.Our findings have implications for understanding Ae. aegypti distribution and for the design of surveillance and control activities relying on household-level data. In settings like Iquitos, where there is a relatively low percentage of Ae. aegypti in permanent water-holding containers, identifying and targeting key premises will be significantly challenged by shifting hotspots of Ae. aegypti infestation. Focusing efforts in large geographic areas with historically high levels of transmission may be more effective than

  17. The spatial and temporal distributions of arthropods in forest canopies: uniting disparate patterns with hypotheses for specialisation.

    Science.gov (United States)

    Wardhaugh, Carl W

    2014-11-01

    Arguably the majority of species on Earth utilise tropical rainforest canopies, and much progress has been made in describing arboreal assemblages, especially for arthropods. The most commonly described patterns for tropical rainforest insect communities are host specificity, spatial specialisation (predominantly vertical stratification), and temporal changes in abundance (seasonality and circadian rhythms). Here I review the recurrent results with respect to each of these patterns and discuss the evolutionary selective forces that have generated them in an attempt to unite these patterns in a holistic evolutionary framework. I propose that species can be quantified along a generalist-specialist scale not only with respect to host specificity, but also other spatial and temporal distribution patterns, where specialisation is a function of the extent of activity across space and time for particular species. When all of these distribution patterns are viewed through the paradigm of specialisation, hypotheses that have been proposed to explain the evolution of host specificity can also be applied to explain the generation and maintenance of other spatial and temporal distribution patterns. The main driver for most spatial and temporal distribution patterns is resource availability. Generally, the distribution of insects follows that of the resources they exploit, which are spatially stratified and vary temporally in availability. Physiological adaptations are primarily important for host specificity, where nutritional and chemical variation among host plants in particular, but also certain prey species and fungi, influence host range. Physiological tolerances of abiotic conditions are also important for explaining the spatial and temporal distributions of some insect species, especially in drier forest environments where desiccation is an ever-present threat. However, it is likely that for most species in moist tropical rainforests, abiotic conditions are valuable

  18. Deriving frequency-dependent spatial patterns in MEG-derived resting state sensorimotor network: A novel multiband ICA technique.

    Science.gov (United States)

    Nugent, Allison C; Luber, Bruce; Carver, Frederick W; Robinson, Stephen E; Coppola, Richard; Zarate, Carlos A

    2017-02-01

    Recently, independent components analysis (ICA) of resting state magnetoencephalography (MEG) recordings has revealed resting state networks (RSNs) that exhibit fluctuations of band-limited power envelopes. Most of the work in this area has concentrated on networks derived from the power envelope of beta bandpass-filtered data. Although research has demonstrated that most networks show maximal correlation in the beta band, little is known about how spatial patterns of correlations may differ across frequencies. This study analyzed MEG data from 18 healthy subjects to determine if the spatial patterns of RSNs differed between delta, theta, alpha, beta, gamma, and high gamma frequency bands. To validate our method, we focused on the sensorimotor network, which is well-characterized and robust in both MEG and functional magnetic resonance imaging (fMRI) resting state data. Synthetic aperture magnetometry (SAM) was used to project signals into anatomical source space separately in each band before a group temporal ICA was performed over all subjects and bands. This method preserved the inherent correlation structure of the data and reflected connectivity derived from single-band ICA, but also allowed identification of spatial spectral modes that are consistent across subjects. The implications of these results on our understanding of sensorimotor function are discussed, as are the potential applications of this technique. Hum Brain Mapp 38:779-791, 2017. © 2016 Wiley Periodicals, Inc. Published 2016. This article is a U.S. Government work and is in the public domain in the USA.

  19. [Explore the spatial and temporal patterns of water pollution in the Yincungang canal of the Lake Taihu basin, China].

    Science.gov (United States)

    Yang, Xiao-Ying; Luo, Xing-Zhang; Zheng, Zheng; Fang, Shu-Bo

    2012-09-01

    Two high-density snap-shot samplings were conducted along the Yincungang canal, one important tributary of the Lake Tai, in April (low flow period) and June (high flow period) of 2010. Geostatistical analysis based on the river network distance was used to analyze the spatial and temporal patterns of the pollutant concentrations along the canal with an emphasis on chemical oxygen demand (COD) and total nitrogen (TN). Study results have indicated: (1) COD and TN concentrations display distinctly different spatial and temporal patterns between the low and high flow periods. COD concentration in June is lower than that in April, while TN concentration has the contrary trend. (2) COD load is relatively constant during the period between the two monitoring periods. The spatial correlation structure of COD is exponential for both April and June, and the change of COD concentration is mainly influenced by hydrological conditions. (3) Nitrogen load from agriculture increased significantly during the period between the two monitoring periods. Large amount of chaotic fertilizing by individual farmers has led to the loss of the spatial correlation among the observed TN concentrations. Hence, changes of TN concentration in June are under the dual influence of agricultural fertilizing and hydrological conditions. In the view of the complex hydrological conditions and serious water pollution in the Lake Taihu region, geostatistical analysis is potentially a useful tool for studying the characteristics of pollutant distribution and making predictions in the region.

  20. Nematode spatial and ecological patterns from tropical and temperate rainforests.

    Directory of Open Access Journals (Sweden)

    Dorota L Porazinska

    Full Text Available Large scale diversity patterns are well established for terrestrial macrobiota (e.g. plants and vertebrates, but not for microscopic organisms (e.g. nematodes. Due to small size, high abundance, and extensive dispersal, microbiota are assumed to exhibit cosmopolitan distributions with no biogeographical patterns. This assumption has been extrapolated from local spatial scale studies of a few taxonomic groups utilizing morphological approaches. Recent molecularly-based studies, however, suggest something quite opposite. Nematodes are the most abundant metazoans on earth, but their diversity patterns are largely unknown. We conducted a survey of nematode diversity within three vertical strata (soil, litter, and canopy of rainforests at two contrasting latitudes in the North American meridian (temperate: the Olympic National Forest, WA, U.S.A and tropical: La Selva Biological Station, Costa Rica using standardized sampling designs and sample processing protocols. To describe nematode diversity, we applied an ecometagenetic approach using 454 pyrosequencing. We observed that: 1 nematode communities were unique without even a single common species between the two rainforests, 2 nematode communities were unique among habitats in both rainforests, 3 total species richness was 300% more in the tropical than in the temperate rainforest, 4 80% of the species in the temperate rainforest resided in the soil, whereas only 20% in the tropics, 5 more than 90% of identified species were novel. Overall, our data provided no support for cosmopolitanism at both local (habitats and large (rainforests spatial scales. In addition, our data indicated that biogeographical patterns typical of macrobiota also exist for microbiota.

  1. Nematode Spatial and Ecological Patterns from Tropical and Temperate Rainforests

    Science.gov (United States)

    Porazinska, Dorota L.; Giblin-Davis, Robin M.; Powers, Thomas O.; Thomas, W. Kelley

    2012-01-01

    Large scale diversity patterns are well established for terrestrial macrobiota (e.g. plants and vertebrates), but not for microscopic organisms (e.g. nematodes). Due to small size, high abundance, and extensive dispersal, microbiota are assumed to exhibit cosmopolitan distributions with no biogeographical patterns. This assumption has been extrapolated from local spatial scale studies of a few taxonomic groups utilizing morphological approaches. Recent molecularly-based studies, however, suggest something quite opposite. Nematodes are the most abundant metazoans on earth, but their diversity patterns are largely unknown. We conducted a survey of nematode diversity within three vertical strata (soil, litter, and canopy) of rainforests at two contrasting latitudes in the North American meridian (temperate: the Olympic National Forest, WA, U.S.A and tropical: La Selva Biological Station, Costa Rica) using standardized sampling designs and sample processing protocols. To describe nematode diversity, we applied an ecometagenetic approach using 454 pyrosequencing. We observed that: 1) nematode communities were unique without even a single common species between the two rainforests, 2) nematode communities were unique among habitats in both rainforests, 3) total species richness was 300% more in the tropical than in the temperate rainforest, 4) 80% of the species in the temperate rainforest resided in the soil, whereas only 20% in the tropics, 5) more than 90% of identified species were novel. Overall, our data provided no support for cosmopolitanism at both local (habitats) and large (rainforests) spatial scales. In addition, our data indicated that biogeographical patterns typical of macrobiota also exist for microbiota. PMID:22984536

  2. Patterns of allozyme variation in diploid and tetraploid Centaurea jacea at different spatial scales.

    Science.gov (United States)

    Hardy, O J; Vekemans, X

    2001-05-01

    The extent and spatial patterns of genetic variation at allozyme markers were investigated within and between diploid and autotetraploid knapweeds (Centaurea jacea L. sensu lato, Asteraceae) at contrasted geographic scales: (1) among populations sampled from a diploid-tetraploid contact zone in the northeastern part of the Belgian Ardennes, and (2) within mixed populations from that zone where diploids and tetraploids coexist. Our data were also compared with a published dataset by Sommer (1990) describing allozyme variation in separate diploid and tetraploid knapweeds populations collected throughout Europe. Genetic diversity was higher in tetraploids. In the Belgian Ardennes and within the mixed populations, both cytotypes had similar levels of spatial genetic structure, they were genetically differentiated, and their distributions of allele frequencies were not spatially correlated. In contrast, at the European scale, diploids and tetraploids did not show differentiated gene pools and presented a strong correlation between their patterns of spatial genetic variation. Numerical simulations showed that the striking difference in patterns observed at small and large geographic scales could be accounted for by a combination of (1) isolation by distance within cytotypes; and (2) partial reproductive barriers between cytotypes and/or recurrent formation of tetraploids. We suggest that this may explain the difficulty of the taxonomic treatment of knapweeds and of polyploid complexes in general.

  3. Spatial Patterns in Herbivory on a Coral Reef Are Influenced by Structural Complexity but Not by Algal Traits

    Science.gov (United States)

    Vergés, Adriana; Vanderklift, Mathew A.; Doropoulos, Christopher; Hyndes, Glenn A.

    2011-01-01

    Background Patterns of herbivory can alter the spatial structure of ecosystems, with important consequences for ecosystem functions and biodiversity. While the factors that drive spatial patterns in herbivory in terrestrial systems are well established, comparatively less is known about what influences the distribution of herbivory in coral reefs. Methodology and Principal Findings We quantified spatial patterns of macroalgal consumption in a cross-section of Ningaloo Reef (Western Australia). We used a combination of descriptive and experimental approaches to assess the influence of multiple macroalgal traits and structural complexity in establishing the observed spatial patterns in macroalgal herbivory, and to identify potential feedback mechanisms between herbivory and macroalgal nutritional quality. Spatial patterns in macroalgal consumption were best explained by differences in structural complexity among habitats. The biomass of herbivorous fish, and rates of herbivory were always greater in the structurally-complex coral-dominated outer reef and reef flat habitats, which were also characterised by high biomass of herbivorous fish, low cover and biomass of macroalgae and the presence of unpalatable algae species. Macroalgal consumption decreased to undetectable levels within 75 m of structurally-complex reef habitat, and algae were most abundant in the structurally-simple lagoon habitats, which were also characterised by the presence of the most palatable algae species. In contrast to terrestrial ecosystems, herbivory patterns were not influenced by the distribution, productivity or nutritional quality of resources (macroalgae), and we found no evidence of a positive feedback between macroalgal consumption and the nitrogen content of algae. Significance This study highlights the importance of seascape-scale patterns in structural complexity in determining spatial patterns of macroalgal consumption by fish. Given the importance of herbivory in maintaining the

  4. Spatial patterns in herbivory on a coral reef are influenced by structural complexity but not by algal traits.

    Directory of Open Access Journals (Sweden)

    Adriana Vergés

    2011-02-01

    Full Text Available Patterns of herbivory can alter the spatial structure of ecosystems, with important consequences for ecosystem functions and biodiversity. While the factors that drive spatial patterns in herbivory in terrestrial systems are well established, comparatively less is known about what influences the distribution of herbivory in coral reefs.We quantified spatial patterns of macroalgal consumption in a cross-section of Ningaloo Reef (Western Australia. We used a combination of descriptive and experimental approaches to assess the influence of multiple macroalgal traits and structural complexity in establishing the observed spatial patterns in macroalgal herbivory, and to identify potential feedback mechanisms between herbivory and macroalgal nutritional quality. Spatial patterns in macroalgal consumption were best explained by differences in structural complexity among habitats. The biomass of herbivorous fish, and rates of herbivory were always greater in the structurally-complex coral-dominated outer reef and reef flat habitats, which were also characterised by high biomass of herbivorous fish, low cover and biomass of macroalgae and the presence of unpalatable algae species. Macroalgal consumption decreased to undetectable levels within 75 m of structurally-complex reef habitat, and algae were most abundant in the structurally-simple lagoon habitats, which were also characterised by the presence of the most palatable algae species. In contrast to terrestrial ecosystems, herbivory patterns were not influenced by the distribution, productivity or nutritional quality of resources (macroalgae, and we found no evidence of a positive feedback between macroalgal consumption and the nitrogen content of algae.This study highlights the importance of seascape-scale patterns in structural complexity in determining spatial patterns of macroalgal consumption by fish. Given the importance of herbivory in maintaining the ability of coral reefs to reorganise and

  5. INVESTIGATION AND EVALUATION OF SPATIAL PATTERNS IN TABRIZ PARKS USING LANDSCAPE METRICS

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    Ali Majnouni Toutakhane

    2016-01-01

    Full Text Available Nowadays, the green spaces in cities and especially metropolises have adopted a variety of functions. In addition to improving the environmental conditions, they are suitable places for spending free times and mitigating nervous pressures of the machinery life based on their distribution and dispersion in the cities. In this research, in order to study the spatial distribution and composition of the parks and green spaces in Tabriz metropolis, the map of Parks prepared using the digital atlas of Tabriz parks and Arc Map and IDRISI softwares. Then, quantitative information of spatial patterns of Tabriz parks provided using Fragstats software and a selection of landscape metrics including: the area of class, patch density, percentage of landscape, average patch size, average patch area, largest patch index, landscape shape index, average Euclidean distance of the nearest neighborhood and average index of patch shape. Then the spatial distribution, composition, extent and continuity of the parks was evaluated. Overall, only 8.5 percent of the landscape is assigned to the parks, and they are studied in three classes of neighborhood, district and regional parks. Neighborhood parks and green spaces have a better spatial distribution pattern compared to the other classes and the studied metrics showed better results for this class. In contrast, the quantitative results of the metrics calculated for regional parks, showed the most unfavorable spatial status for this class of parks among the three classes studied in Tabriz city.

  6. TOOLS FOR PRESENTING SPATIAL AND TEMPORAL PATTERNS OF ENVIRONMENTAL MONITORING DATA

    Science.gov (United States)

    The EPA Health Effects Research Laboratory has developed this data presentation tool for use with a variety of types of data which may contain spatial and temporal patterns of interest. he technology links mainframe computing power to the new generation of "desktop publishing" ha...

  7. Spatial patterns of high Aedes aegypti oviposition activity in northwestern Argentina.

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    Elizabet Lilia Estallo

    Full Text Available BACKGROUND: In Argentina, dengue has affected mainly the Northern provinces, including Salta. The objective of this study was to analyze the spatial patterns of high Aedes aegypti oviposition activity in San Ramón de la Nueva Orán, northwestern Argentina. The location of clusters as hot spot areas should help control programs to identify priority areas and allocate their resources more effectively. METHODOLOGY: Oviposition activity was detected in Orán City (Salta province using ovitraps, weekly replaced (October 2005-2007. Spatial autocorrelation was measured with Moran's Index and depicted through cluster maps to identify hot spots. Total egg numbers were spatially interpolated and a classified map with Ae. aegypti high oviposition activity areas was performed. Potential breeding and resting (PBR sites were geo-referenced. A logistic regression analysis of interpolated egg numbers and PBR location was performed to generate a predictive mapping of mosquito oviposition activity. PRINCIPAL FINDINGS: Both cluster maps and predictive map were consistent, identifying in central and southern areas of the city high Ae. aegypti oviposition activity. A logistic regression model was successfully developed to predict Ae. aegypti oviposition activity based on distance to PBR sites, with tire dumps having the strongest association with mosquito oviposition activity. A predictive map reflecting probability of oviposition activity was produced. The predictive map delimitated an area of maximum probability of Ae. aegypti oviposition activity in the south of Orán city where tire dumps predominate. The overall fit of the model was acceptable (ROC=0.77, obtaining 99% of sensitivity and 75.29% of specificity. CONCLUSIONS: Distance to tire dumps is inversely associated with high mosquito activity, allowing us to identify hot spots. These methodologies are useful for prevention, surveillance, and control of tropical vector borne diseases and might assist

  8. Data Auditor: Analyzing Data Quality Using Pattern Tableaux

    Science.gov (United States)

    Srivastava, Divesh

    Monitoring databases maintain configuration and measurement tables about computer systems, such as networks and computing clusters, and serve important business functions, such as troubleshooting customer problems, analyzing equipment failures, planning system upgrades, etc. These databases are prone to many data quality issues: configuration tables may be incorrect due to data entry errors, while measurement tables may be affected by incorrect, missing, duplicate and delayed polls. We describe Data Auditor, a tool for analyzing data quality and exploring data semantics of monitoring databases. Given a user-supplied constraint, such as a boolean predicate expected to be satisfied by every tuple, a functional dependency, or an inclusion dependency, Data Auditor computes "pattern tableaux", which are concise summaries of subsets of the data that satisfy or fail the constraint. We discuss the architecture of Data Auditor, including the supported types of constraints and the tableau generation mechanism. We also show the utility of our approach on an operational network monitoring database.

  9. A spatial emergy model for Alachua County, Florida

    Science.gov (United States)

    Lambert, James David

    A spatial model of the distribution of energy flows and storages in Alachua County, Florida, was created and used to analyze spatial patterns of energy transformation hierarchy in relation to spatial patterns of human settlement. Emergy, the available energy of one kind previously required directly or indirectly to make a product or service, was used as a measure of the quality of the different forms of energy flows and storages. Emergy provides a common unit of measure for comparing the productive contributions of natural processes with those of economic and social processes---it is an alternative to using money for measuring value. A geographic information system was used to create a spatial model and make maps that show the distribution and magnitude of different types of energy and emergy flows and storages occurring in one-hectare land units. Energy transformities were used to convert individual energy flows and storages into emergy units. Maps of transformities were created that reveal a clear spatial pattern of energy transformation hierarchy. The maps display patterns of widely-dispersed areas with lower transformity energy flows and storages, and smaller, centrally-located areas with higher transformities. Energy signature graphs and spatial unit transformities were used to characterize and compare the types and amounts of energy being consumed and stored according to land use classification, planning unit, and neighborhood categories. Emergy ratio maps and spatial unit ratios were created by dividing the values for specific emergy flows or storages by the values for other emergy flows or storages. Spatial context analysis was used to analyze the spatial distribution patterns of mean and maximum values for emergy flows and storages. The modeling method developed for this study is general and applicable to all types of landscapes and could be applied at any scale. An advantage of this general approach is that the results of other studies using this method

  10. Residential Racial Isolation and Spatial Patterning of Type 2 Diabetes Mellitus in Durham, North Carolina.

    Science.gov (United States)

    Bravo, Mercedes A; Anthopolos, Rebecca; Kimbro, Rachel T; Miranda, Marie Lynn

    2018-05-14

    Neighborhood characteristics such as racial segregation may be associated with type 2 diabetes mellitus, but studies have not examined these relationships using spatial models appropriate for geographically patterned health outcomes. We construct a local, spatial index of racial isolation (RI) for blacks, which measures the extent to which blacks are exposed to only one another, to estimate associations of diabetes with RI and examine how RI relates to spatial patterning in diabetes. We obtained 2007-2011 electronic health records from the Duke Medicine Enterprise Data Warehouse. Patient data were linked to RI based on census block of residence. We use aspatial and spatial Bayesian models to assess spatial variation in diabetes and relationships with RI. Compared to spatial models with patient age and sex, residual geographic heterogeneity in diabetes in spatial models that also included RI was 29% and 24% lower for non-Hispanic whites and blacks, respectively. A 0.20 unit increase in RI was associated with 1.24 (95% credible interval: 1.17, 1.31) and 1.07 (1.05, 1.10) increased risk of diabetes for whites and blacks, respectively. Improved understanding of neighborhood characteristics associated with diabetes can inform development of policy interventions.

  11. Spatial Autocorrelation Patterns of Understory Plant Species in a Subtropical Rainforest at Lanjenchi, Southern Taiwan

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    Su-Wei Fan

    2010-06-01

    Full Text Available Many studies described relationships between plant species and intrinsic or exogenous factors, but few quantified spatial scales of species patterns. In this study, quantitative methods were used to explore the spatial scale of understory species (including resident and transient species, in order to identify the influential factors of species distribution. Resident species (including herbaceous species, climbers and tree ferns < 1 m high were investigated on seven transects, each 5-meter wide and 300-meter long, at Lanjenchi plot in Nanjenshan Reserve, southern Taiwan. Transient species (seedling of canopy, subcanopy and shrub species < 1 cm diameter at breast height were censused in three of the seven transects. The herb coverage and seedling abundance were calculated for each 5 × 5 m quadrat along the transects, and Moran’s I and Galiano’s new local variance (NLV indices were then used to identify the spatial scale of autocorrelation for each species. Patterns of species abundance of understory layer varied among species at fine scale within 50 meters. Resident species showed a higher proportion of significant autocorrelation than the transient species. Species with large size or prolonged fronds or stems tended to show larger scales in autocorrelation. However, dispersal syndromes and fruit types did not relate to any species’ spatial patterns. Several species showed a significant autocorrelation at a 180-meter class which happened to correspond to the local replicates of topographical features in hilltops. The spatial patterns of understory species at Lanjenchi plot are mainly influenced by species’ intrinsic traits and topographical characteristics.

  12. DYNAMIC MATHEMATICAL MODEL OF URBAN SPATIAL PATTERN (RESIDENTIAL CHOICE OF LOCATION: MOBILITY VS EXTERNALITY

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    Rahma Fitriani

    2015-01-01

    Full Text Available Household’s residential choice of location determines urban spatial pattern (e.g sprawl. The static model which assumes that the choice has been affected by distance to the CBD and location specific externality, fails to capture the evoution of the pattern over time. Therefore this study proposes a dynamic version of the model. It analyses the effects of externalities on the optimal solution of development decision as function of time. It also derives the effect of mobility and externality on the rate of change of development pattern through time. When the increasing rate of utility is not as significant as the increasing rate of income, the externalities will delay the change of urban spatial pattern over time. If the mobility costs increase by large amount relative to the increase of income and inflation rate, then the mobility effect dominates the effects of externalities in delaying the urban expansion.

  13. Individual Differences in Spatial Pattern Separation Performance Associated with Healthy Aging in Humans

    Science.gov (United States)

    Stark, Shauna M.; Yassa, Michael A.; Stark, Craig E. L.

    2010-01-01

    Rodent studies have suggested that "pattern separation," the ability to distinguish among similar experiences, is diminished in a subset of aged rats. We extended these findings to the human using a task designed to assess spatial pattern separation behavior (determining at time of test whether pairs of pictures shown during the study were in the…

  14. Geo-ecological spatial pattern analysis of the island of Fogo (Cape Verde)

    Science.gov (United States)

    Olehowski, C.; Naumann, S.; Fischer, D.; Siegmund, A.

    2008-12-01

    With its small-scale climatic, floristic and geo-ecological differentiation, the island of Fogo is an optimal research area for understanding semi-arid island ecosystems in the marginal tropics. Because of the high variability in precipitation, the archipelago of Cape Verde has a potentially high ecological vulnerability, which is caused mainly by population growth, intensification of agricultural land use and increasing tourism. In this context, a geo-ecological spatial pattern analysis has been conducted for Fogo, including several types of geo-ecological layers like vegetation, elevation, aspect, soil and geology. The different kinds of spatial patterns that are detected can be used as a first tool to display distinctive levels of ecological vulnerability. These levels could constitute a base for sustainable land use planning and the redevelopment of agricultural strategies.

  15. Spatial profiling of nuclear receptor transcription patterns over the course of Drosophila development.

    Science.gov (United States)

    Wilk, Ronit; Hu, Jack; Krause, Henry M

    2013-07-08

    Previous work has shown that many of the 18 family members of Drosophila nuclear receptor transcription factors function in a temporal hierarchy to coordinate developmental progression and growth with the rate limiting process of metabolism. To gain further insight into these interactions and processes, we have undertaken a whole-family analysis of nuclear receptor mRNA spatial expression patterns over the entire process of embryogenesis, as well as the 3rd instar wandering larva stage, by using high-resolution fluorescence in situ hybridization. Overall, the patterns of expression are remarkably consistent with previously mapped spatial activity profiles documented during the same time points, with similar hot spots and temporal profiles in endocrine and metabolically important tissues. Among the more remarkable of the findings is that the majority of mRNA expression patterns observed show striking subcellular distributions, indicating potentially critical roles in the control of protein synthesis and subsequent subcellular distributions. These patterns will serve as a useful reference for future studies on the tissue-specific roles and interactions of nuclear receptor proteins, partners, cofactors and ligands.

  16. Web-based GIS for spatial pattern detection: application to malaria incidence in Vietnam.

    Science.gov (United States)

    Bui, Thanh Quang; Pham, Hai Minh

    2016-01-01

    There is a great concern on how to build up an interoperable health information system of public health and health information technology within the development of public information and health surveillance programme. Technically, some major issues remain regarding to health data visualization, spatial processing of health data, health information dissemination, data sharing and the access of local communities to health information. In combination with GIS, we propose a technical framework for web-based health data visualization and spatial analysis. Data was collected from open map-servers and geocoded by open data kit package and data geocoding tools. The Web-based system is designed based on Open-source frameworks and libraries. The system provides Web-based analyst tool for pattern detection through three spatial tests: Nearest neighbour, K function, and Spatial Autocorrelation. The result is a web-based GIS, through which end users can detect disease patterns via selecting area, spatial test parameters and contribute to managers and decision makers. The end users can be health practitioners, educators, local communities, health sector authorities and decision makers. This web-based system allows for the improvement of health related services to public sector users as well as citizens in a secure manner. The combination of spatial statistics and web-based GIS can be a solution that helps empower health practitioners in direct and specific intersectional actions, thus provide for better analysis, control and decision-making.

  17. Spatio-Temporal Diffusion Pattern and Hotspot Detection of Dengue in Chachoengsao Province, Thailand

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    Phaisarn Jeefoo

    2010-12-01

    Full Text Available In recent years, dengue has become a major international public health concern. In Thailand it is also an important concern as several dengue outbreaks were reported in last decade. This paper presents a GIS approach to analyze the spatial and temporal dynamics of dengue epidemics. The major objective of this study was to examine spatial diffusion patterns and hotspot identification for reported dengue cases. Geospatial diffusion pattern of the 2007 dengue outbreak was investigated. Map of daily cases was generated for the 153 days of the outbreak. Epidemiological data from Chachoengsao province, Thailand (reported dengue cases for the years 1999–2007 was used for this study. To analyze the dynamic space-time pattern of dengue outbreaks, all cases were positioned in space at a village level. After a general statistical analysis (by gender and age group, data was subsequently analyzed for temporal patterns and correlation with climatic data (especially rainfall, spatial patterns and cluster analysis, and spatio-temporal patterns of hotspots during epidemics. The results revealed spatial diffusion patterns during the years 1999–2007 representing spatially clustered patterns with significant differences by village. Villages on the urban fringe reported higher incidences. The space and time of the cases showed outbreak movement and spread patterns that could be related to entomologic and epidemiologic factors. The hotspots showed the spatial trend of dengue diffusion. This study presents useful information related to the dengue outbreak patterns in space and time and may help public health departments to plan strategies to control the spread of disease. The methodology is general for space-time analysis and can be applied for other infectious diseases as well.

  18. Spatial Pattern Determination of Biodiversity Threats at Landscape Level (Case Study: Golestan Province

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    R. Mirzaei

    2015-06-01

    Full Text Available Mapping spatial patterns of potential biodiversity threats is one of the important steps for effective conservation planning and activities. To determine the spatial patterns of threats in Golestan province, 12 criteria in four main groups including structural (fractal coefficient of perimeter, circularity ratio of area, average slope, compositional aspects of biodiversity (presence of species at risk, non-biological threats (distance to city, distance to village, distance to road, distance to infrastructure, distance to agricultural land, soil pollution, risk of fire and isolation (Nearest Neighbor Index were used. These data layers were digitized in GIS environment and were weighted through Analytical Hierarchy Process. A weighted linear combination was then used to map the spatial pattern of biodiversity threats in the province. Compositional aspect (0.59, non-biological threats (0.23, isolation (0.11, and structural aspect (0.07 were relatively weighted in the order of importance. Central parts of the province and patches in the northern and southern parts were recognized to be more exposed to biodiversity threats. The central parts of the province were mostly threatened by urban, industrial, road and agricultural development, whereas the northern and southern parts were recognized as areas of conservation importance having a variety of threatened birds.

  19. Tree Regeneration Spatial Patterns in Ponderosa Pine Forests Following Stand-Replacing Fire: Influence of Topography and Neighbors

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    Justin P. Ziegler

    2017-10-01

    Full Text Available Shifting fire regimes alter forest structure assembly in ponderosa pine forests and may produce structural heterogeneity following stand-replacing fire due, in part, to fine-scale variability in growing environments. We mapped tree regeneration in eighteen plots 11 to 15 years after stand-replacing fire in Colorado and South Dakota, USA. We used point pattern analyses to examine the spatial pattern of tree locations and heights as well as the influence of tree interactions and topography on tree patterns. In these sparse, early-seral forests, we found that all species were spatially aggregated, partly attributable to the influence of (1 aspect and slope on conifers; (2 topographic position on quaking aspen; and (3 interspecific attraction between ponderosa pine and other species. Specifically, tree interactions were related to finer-scale patterns whereas topographic effects influenced coarse-scale patterns. Spatial structures of heights revealed conspecific size hierarchies with taller trees in denser neighborhoods. Topography and heterospecific tree interactions had nominal effect on tree height spatial structure. Our results demonstrate how stand-replacing fires create heterogeneous forest structures and suggest that scale-dependent, and often facilitatory, rather than competitive, processes act on regenerating trees. These early-seral processes will establish potential pathways of stand development, affecting future forest dynamics and management options.

  20. Spatial vegetation patterns and neighborhood competition among woody plants in an East African savanna.

    Science.gov (United States)

    Dohn, Justin; Augustine, David J; Hanan, Niall P; Ratnam, Jayashree; Sankaran, Mahesh

    2017-02-01

    The majority of research on savanna vegetation dynamics has focused on the coexistence of woody and herbaceous vegetation. Interactions among woody plants in savannas are relatively poorly understood. We present data from a 10-yr longitudinal study of spatially explicit growth patterns of woody vegetation in an East African savanna following exclusion of large herbivores and in the absence of fire. We examined plant spatial patterns and quantified the degree of competition among woody individuals. Woody plants in this semiarid savanna exhibit strongly clumped spatial distributions at scales of 1-5 m. However, analysis of woody plant growth rates relative to their conspecific and heterospecific neighbors revealed evidence for strong competitive interactions at neighborhood scales of up to 5 m for most woody plant species. Thus, woody plants were aggregated in clumps despite significantly decreased growth rates in close proximity to neighbors, indicating that the spatial distribution of woody plants in this region depends on dispersal and establishment processes rather than on competitive, density-dependent mortality. However, our documentation of suppressive effects of woody plants on neighbors also suggests a potentially important role for tree-tree competition in controlling vegetation structure and indicates that the balanced-competition hypothesis may contribute to well-known patterns in maximum tree cover across rainfall gradients in Africa. © 2016 by the Ecological Society of America.

  1. Bifurcation and spatial pattern formation in spreading of disease with incubation period in a phytoplankton dynamics

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    Randhir Singh Baghel

    2012-02-01

    Full Text Available In this article, we propose a three dimensional mathematical model of phytoplankton dynamics with the help of reaction-diffusion equations that studies the bifurcation and pattern formation mechanism. We provide an analytical explanation for understanding phytoplankton dynamics with three population classes: susceptible, incubated, and infected. This model has a Holling type II response function for the population transformation from susceptible to incubated class in an aquatic ecosystem. Our main goal is to provide a qualitative analysis of Hopf bifurcation mechanisms, taking death rate of infected phytoplankton as bifurcation parameter, and to study further spatial patterns formation due to spatial diffusion. Here analytical findings are supported by the results of numerical experiments. It is observed that the coexistence of all classes of population depends on the rate of diffusion. Also we obtained the time evaluation pattern formation of the spatial system.

  2. Spatial Distribution and Accessibility of Health Facilities in Akwa ...

    African Journals Online (AJOL)

    This paper therefore analyzed the spatial patterns of healthcare facilities in Akwa ... Data on six health indicator variables were obtained and analyzed to assess ... of healthcare facilities and thus hinders good access to high quality healthcare ...

  3. Temporal changes of spatial soil moisture patterns: controlling factors explained with a multidisciplinary approach

    Science.gov (United States)

    Martini, Edoardo; Wollschläger, Ute; Kögler, Simon; Behrens, Thorsten; Dietrich, Peter; Reinstorf, Frido; Schmidt, Karsten; Weiler, Markus; Werban, Ulrike; Zacharias, Steffen

    2016-04-01

    Characterizing the spatial patterns of soil moisture is critical for hydrological and meteorological models, as soil moisture is a key variable that controls matter and energy fluxes and soil-vegetation-atmosphere exchange processes. Deriving detailed process understanding at the hillslope scale is not trivial, because of the temporal variability of local soil moisture dynamics. Nevertheless, it remains a challenge to provide adequate information on the temporal variability of soil moisture and its controlling factors. Recent advances in wireless sensor technology allow monitoring of soil moisture dynamics with high temporal resolution at varying scales. In addition, mobile geophysical methods such as electromagnetic induction (EMI) have been widely used for mapping soil water content at the field scale with high spatial resolution, as being related to soil apparent electrical conductivity (ECa). The objective of this study was to characterize the spatial and temporal pattern of soil moisture at the hillslope scale and to infer the controlling hydrological processes, integrating well established and innovative sensing techniques, as well as new statistical methods. We combined soil hydrological and pedological expertise with geophysical measurements and methods from digital soil mapping for designing a wireless soil moisture monitoring network. For a hillslope site within the Schäfertal catchment (Central Germany), soil water dynamics were observed during 14 months, and soil ECa was mapped on seven occasions whithin this period of time using an EM38-DD device. Using the Spearman rank correlation coefficient, we described the temporal persistence of a dry and a wet characteristic state of soil moisture as well as the switching mechanisms, inferring the local properties that control the observed spatial patterns and the hydrological processes driving the transitions. Based on this, we evaluated the use of EMI for mapping the spatial pattern of soil moisture under

  4. Spatial pattern of foreign direct investment of China's textile enterprises

    Institute of Scientific and Technical Information of China (English)

    2018-01-01

    China textile industry has achieved encouraging achievements, becoming the primary industry of the integration of investment, production, consumption, employment increase and foreign exchange earnings. On the basis of reviewing studies on foreign direct investment of domestic textile enterprises, this paper come up with the structure analysis framework of spatial strategies of foreign investment of China's textile enterprises with the methods of statistical information, field research and interviews of senior managers. Besides, this paper analyze the spatial distribution and industry choices of foreign direct investment of China's textile enterprises.

  5. Analyzing spatial and temporal trends in Aboveground Biomass within the Acadian New England Forests using the complete Landsat Archive

    Science.gov (United States)

    Kilbride, J. B.; Fraver, S.; Ayrey, E.; Weiskittel, A.; Braaten, J.; Hughes, J. M.; Hayes, D. J.

    2017-12-01

    Forests within the New England states and Canadian Maritime provinces, here described as the Acadian New England (ANE) forests, have undergone substantial disturbances due to insect, fire, and anthropogenic factors. Through repeated satellite observations captures by USGS's Landsat program, 45 years of disturbance information can be incorporated into modeling efforts to better understand the spatial and temporal trends in forest above ground biomass (AGB). Using Google's Earth Engine, annual mosaics were developed for the ANE study area and then disturbance and recovery metrics were developed using the temporal segmentation algorithm VeRDET. Normalization procedures were developed to incorporate the Landsat Multispectral Scanner (MSS, 1972 - 1985) data alongside the modern era of Landsat Thematic Mapper (TM, 1984-2013), Enhanced Thematic Mapper plus (ETM+, 1999 - present), and Operational Land Imager (OLI, 2013- present) data products. This has enabled the creation of a dataset with an unprecedented spatial and temporal view of forest landscape change. Model training was performed using was the Forest Inventory Analysis (FIA) and New Brunswick Permanent Sample Plot data datasets. Modeling was performed using parametric techniques such as mixed effects models and non-parametric techniques such as k-NN imputation and generalized boosted regression. We compare the biomass estimate and model accuracy to other inventory and modeling studies produced within this study area. The spatial and temporal patterns of stock changes are analyzed against resource policy, land ownership changes, and forest management.

  6. Spatial patterns of modern period human-caused fire occurrence in the Missouri Ozark Highlands

    Science.gov (United States)

    Jian Yang; Hong S. Healy; Stephen R. Shifley; Eric J. Gustafson

    2007-01-01

    The spatial pattern of forest fire locations is important in the study of the dynamics of fire disturbance. In this article we used a spatial point process modeling approach to quantitatively study the effects of land cover, topography, roads, municipalities, ownership, and population density on fire occurrence reported between 1970 and 2002 in the Missouri Ozark...

  7. Spatial attraction in migrants' settlement patterns in the city of Catania

    Directory of Open Access Journals (Sweden)

    Angelo Mazza

    2016-07-01

    Full Text Available Background: In broad terms, and apart from ethnic discriminatory rules enforced in some places and at some times, residential segregation may be ascribed both to economic inhomogeneities in the urban space (e.g., in the cost of rents, or in occupation opportunities and to spatial attraction among individuals sharing the same group identity and culture. Objective: Traditional indices of spatial segregation do not distinguish between these two sources of clustering. Furthermore, they typically rely on census tracts, a scale that does not allow for fine-grained analysis. Also, the use of alternative zoning often leads to conflicting results. The aim of this paper is to measure spatial attraction among groups of foreign migrants in Catania (Italy using individual household data. Methods: We apply a version of Ripley's K-function specially conceived for assessing spatial attraction while adjusting for the effects of spatial inhomogeneity. To avoid the risk of confounding the two sources of clustering, spatial inhomogeneity is estimated following a case-control approach. Results: Different parts of the city exhibit different suitabilities for migrants of different nationalities, with groups mainly involved in housekeeping and caregiving being more spread than the ones specialized in peddling and retailing. A significant spatial attraction has been found for Sri Lankan, Mauritians, Senegalese, and Chinese. Conversely, the settlement patterns of Tunisians and Moroccans comply with random allocation. These results seem consistent with the hypothesis of a relevant correlation between chain migration and spatial attraction.

  8. Mechanism Underlying the Spatial Pattern Formation of Dominant Tree Species in a Natural Secondary Forest.

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    Guodong Jia

    Full Text Available Studying the spatial pattern of plant species may provide significant insights into processes and mechanisms that maintain stand stability. To better understand the dynamics of naturally regenerated secondary forests, univariate and bivariate Ripley's L(r functions were employed to evaluate intra-/interspecific relationships of four dominant tree species (Populus davidiana, Betula platyphylla, Larix gmelinii and Acer mono and to distinguish the underlying mechanism of spatial distribution. The results showed that the distribution of soil, water and nutrients was not fragmented but presented clear gradients. An overall aggregated distribution existed at most distances. No correlation was found between the spatial pattern of soil conditions and that of trees. Both positive and negative intra- and interspecific relationships were found between different DBH classes at various distances. Large trees did not show systematic inhibition of the saplings. By contrast, the inhibition intensified as the height differences increased between the compared pairs. Except for Larix, universal inhibition of saplings by upper layer trees occurred among other species, and this reflected the vertical competition for light. Therefore, we believe that competition for light rather than soil nutrients underlies the mechanism driving the formation of stand spatial pattern in the rocky mountainous areas examined.

  9. Detecting spatial patterns with the cumulant function – Part 2: An application to El Niño

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    P. Yiou

    2008-02-01

    Full Text Available The spatial coherence of a measured variable (e.g. temperature or pressure is often studied to determine the regions of high variability or to find teleconnections, i.e. correlations between specific regions. While usual methods to find spatial patterns, such as Principal Components Analysis (PCA, are constrained by linear symmetries, the dependence of variables such as temperature or pressure at different locations is generally nonlinear. In particular, large deviations from the sample mean are expected to be strongly affected by such nonlinearities. Here we apply a newly developed nonlinear technique (Maxima of Cumulant Function, MCF for detection of typical spatial patterns that largely deviate from the mean. In order to test the technique and to introduce the methodology, we focus on the El Niño/Southern Oscillation and its spatial patterns. We find nonsymmetric temperature patterns corresponding to El Niño and La Niña, and we compare the results of MCF with other techniques, such as the symmetric solutions of PCA, and the nonsymmetric solutions of Nonlinear PCA (NLPCA. We found that MCF solutions are more reliable than the NLPCA fits, and can capture mixtures of principal components. Finally, we apply Extreme Value Theory on the temporal variations extracted from our methodology. We find that the tails of the distribution of extreme temperatures during La Niña episodes is bounded, while the tail during El Niños is less likely to be bounded. This implies that the mean spatial patterns of the two phases are asymmetric, as well as the behaviour of their extremes.

  10. Bilinear common spatial pattern for single-trial ERP-based rapid serial visual presentation triage

    Science.gov (United States)

    Yu, K.; Shen, K.; Shao, S.; Ng, W. C.; Li, X.

    2012-08-01

    Common spatial pattern (CSP) analysis is a useful tool for the feature extraction of event-related potentials (ERP). However, CSP is essentially time invariant, and thus unable to exploit the temporal information of ERP. This paper proposes a variant of CSP, namely bilinear common spatial pattern (BCSP), which is capable of accommodating both spatial and temporal information. BCSP generalizes CSP through iteratively optimizing bilinear filters. These bilinear filters constitute a spatio-temporal subspace in which the separation between two conditions is maximized. The method is unique in the sense that it is mathematically intuitive and simple, as all the bilinear filters are obtained by maximizing the power ratio as CSP does. The proposed method was evaluated on 20 subjects’ ERP data collected in rapid serial visual presentation triage experiments. The results show that BCSP achieved significantly higher average test accuracy (12.3% higher, p < 0.001).

  11. Spatial Patterns and Interspecific Associations of Three Canopy Species at Different Life Stages in a Subtropical Forest,China

    Institute of Scientific and Technical Information of China (English)

    Lin Li; Shi-Guang Wei; Zhong-Liang Huang; Wan-Hui Ye; Hong-Lin Cao

    2008-01-01

    Spatial patterns of species at different life stages are an important aspect for understanding causal mechanisms that facilitate species co-existence.Using Ripley's univariate L(t) and bivariate L12(t) functions,we analyzed the spatial patterns and interspecific associations of three canopy species at different life history stages in a 20-ha subtropical forest plot in Dinghushan Nature Reserve.Based on diameter at breast height (DBH),four life stages were distinguished.Castanopsis chinensis and Schima superba showed a unimodal DBH distribution.Engelhardtia roxburghiana showed a bimodal curve.L(t) function analysis showed significantly aggregated distributions of all three species at later life stages and random distribution at early life stages at some scales.From the analysis of L12(t) function,the results showed the positive association was a dominant pattern for most species pairs at most scales but the intensity of association decreases with the increase of life stages.Juveniles of the three species had no negative intra- and interspecific associations with the older life stages.Only premature trees were suppressed by overmature trees at some scales.Considering these results,we found three canopy-dominant species that lacked regeneration.There was no direct competition occurring between understorey individuals.Young trees can grow well under conspecific species with two other species.Longevity and lack of regeneration led to a large number of trees stored in mature and overmature stages,therefore,intra-and inter-competition can be strong at later life stages.

  12. Estimating planktonic diversity through spatial dominance patterns in a model ocean.

    Science.gov (United States)

    Soccodato, Alice; d'Ovidio, Francesco; Lévy, Marina; Jahn, Oliver; Follows, Michael J; De Monte, Silvia

    2016-10-01

    In the open ocean, the observation and quantification of biodiversity patterns is challenging. Marine ecosystems are indeed largely composed by microbial planktonic communities whose niches are affected by highly dynamical physico-chemical conditions, and whose observation requires advanced methods for morphological and molecular classification. Optical remote sensing offers an appealing complement to these in-situ techniques. Global-scale coverage at high spatiotemporal resolution is however achieved at the cost of restrained information on the local assemblage. Here, we use a coupled physical and ecological model ocean simulation to explore one possible metrics for comparing measures performed on such different scales. We show that a large part of the local diversity of the virtual plankton ecosystem - corresponding to what accessible by genomic methods - can be inferred from crude, but spatially extended, information - as conveyed by remote sensing. Shannon diversity of the local community is indeed highly correlated to a 'seascape' index, which quantifies the surrounding spatial heterogeneity of the most abundant functional group. The error implied in drastically reducing the resolution of the plankton community is shown to be smaller in frontal regions as well as in regions of intermediate turbulent energy. On the spatial scale of hundreds of kms, patterns of virtual plankton diversity are thus largely sustained by mixing communities that occupy adjacent niches. We provide a proof of principle that in the open ocean information on spatial variability of communities can compensate for limited local knowledge, suggesting the possibility of integrating in-situ and satellite observations to monitor biodiversity distribution at the global scale. Copyright © 2016 Elsevier B.V. All rights reserved.

  13. Density of founder cells affects spatial pattern formation and cooperation in Bacillus subtilis biofilms.

    Science.gov (United States)

    van Gestel, Jordi; Weissing, Franz J; Kuipers, Oscar P; Kovács, Akos T

    2014-10-01

    In nature, most bacteria live in surface-attached sedentary communities known as biofilms. Biofilms are often studied with respect to bacterial interactions. Many cells inhabiting biofilms are assumed to express 'cooperative traits', like the secretion of extracellular polysaccharides (EPS). These traits can enhance biofilm-related properties, such as stress resilience or colony expansion, while being costly to the cells that express them. In well-mixed populations cooperation is difficult to achieve, because non-cooperative individuals can reap the benefits of cooperation without having to pay the costs. The physical process of biofilm growth can, however, result in the spatial segregation of cooperative from non-cooperative individuals. This segregation can prevent non-cooperative cells from exploiting cooperative neighbors. Here we examine the interaction between spatial pattern formation and cooperation in Bacillus subtilis biofilms. We show, experimentally and by mathematical modeling, that the density of cells at the onset of biofilm growth affects pattern formation during biofilm growth. At low initial cell densities, co-cultured strains strongly segregate in space, whereas spatial segregation does not occur at high initial cell densities. As a consequence, EPS-producing cells have a competitive advantage over non-cooperative mutants when biofilms are initiated at a low density of founder cells, whereas EPS-deficient cells have an advantage at high cell densities. These results underline the importance of spatial pattern formation for competition among bacterial strains and the evolution of microbial cooperation.

  14. Magnitude and Spatial Distribution of Impact Intensity Under the Foot Relates to Initial Foot Contact Pattern.

    Science.gov (United States)

    Breine, Bastiaan; Malcolm, Philippe; Segers, Veerle; Gerlo, Joeri; Derie, Rud; Pataky, Todd; Frederick, Edward C; De Clercq, Dirk

    2017-12-01

    In running, foot contact patterns (rear-, mid-, or forefoot contact) influence impact intensity and initial ankle and foot kinematics. The aim of the study was to compare impact intensity and its spatial distribution under the foot between different foot contact patterns. Forty-nine subjects ran at 3.2 m·s -1 over a level runway while ground reaction forces (GRF) and shoe-surface pressures were recorded and foot contact pattern was determined. A 4-zone footmask (forefoot, midfoot, medial and lateral rearfoot) assessed the spatial distribution of the vertical GRF under the foot. We calculated peak vertical instantaneous loading rate of the GRF (VILR) per foot zone as the impact intensity measure. Midfoot contact patterns were shown to have the lowest, and atypical rearfoot contact patterns the highest impact intensities, respectively. The greatest local impact intensity was mainly situated under the rear- and midfoot for the typical rearfoot contact patterns, under the midfoot for the atypical rearfoot contact patterns, and under the mid- and forefoot for the midfoot contact patterns. These findings indicate that different foot contact patterns could benefit from cushioning in different shoe zones.

  15. Multitemporal spatial pattern analysis of Tulum's tropical coastal landscape

    Science.gov (United States)

    Ramírez-Forero, Sandra Carolina; López-Caloca, Alejandra; Silván-Cárdenas, José Luis

    2011-11-01

    The tropical coastal landscape of Tulum in Quintana Roo, Mexico has a high ecological, economical, social and cultural value, it provides environmental and tourism services at global, national, regional and local levels. The landscape of the area is heterogeneous and presents random fragmentation patterns. In recent years, tourist services of the region has been increased promoting an accelerate expansion of hotels, transportation and recreation infrastructure altering the complex landscape. It is important to understand the environmental dynamics through temporal changes on the spatial patterns and to propose a better management of this ecological area to the authorities. This paper addresses a multi-temporal analysis of land cover changes from 1993 to 2000 in Tulum using Thematic Mapper data acquired by Landsat-5. Two independent methodologies were applied for the analysis of changes in the landscape and for the definition of fragmentation patterns. First, an Iteratively Multivariate Alteration Detection (IR-MAD) algorithm was used to detect and localize land cover change/no-change areas. Second, the post-classification change detection evaluated using the Support Vector Machine (SVM) algorithm. Landscape metrics were calculated from the results of IR-MAD and SVM. The analysis of the metrics indicated, among other things, a higher fragmentation pattern along roadways.

  16. Spatial Pattern of Residential Carbon Dioxide Emissions in a Rapidly Urbanizing Chinese City and Its Mismatch Effect

    Directory of Open Access Journals (Sweden)

    Heli Lu

    2018-03-01

    Full Text Available Cities undergoing rapid urbanization are characterized by quick successions of spatiotemporal patterns, meaning that traditional methods cannot adequately assess carbon emissions from urban residential areas, which prevents the study of spatial mismatch. Therefore, this study utilizes night-time lights to construct a spatial emissions model that enables the analysis of the evolution of emissions patterns in China. The results indicate that, compared to the traditional method, the spatial modeling based on night-time lights reflects the spatial emissions trajectories in a more timely and accurate manner in rapidly urbanizing cities. Additionally, we found a relatively low degree of spatial match between emissions and economic activities, with the former, which are greatly affected by urbanization, having a larger dynamism and instability than the latter. Such spatial mismatch effect illustrates that policy makers should focus on factors beyond economics in order to reduce residential carbon emissions during China’s rapid urbanization process.

  17. Analyzing the spatial patterns and drivers of ecosystem services in rapidly urbanizing Taihu Lake Basin of China

    Science.gov (United States)

    Ai, Junyong; Sun, Xiang; Feng, Lan; Li, Yangfan; Zhu, Xiaodong

    2015-09-01

    Quantifying and mapping the distribution patterns of ecosystem services can help to ascertain which services should be protected and where investments should be directed to improve synergies and reduce tradeoffs. Moreover, the indicators of urbanization that affect the provision of ecosystem services must be identified to determine which approach to adopt in formulating policies related to these services. This paper presents a case study that maps the distribution of multiple ecosystem services and analyzes the ways in which they interact. The relationship between the supply of ecosystem services and the socio-economic development in the Taihu Lake Basin of eastern China is also revealed. Results show a significant negative relationship between crop production and tourism income ( p<0.005) and a positive relationship between crop production, nutrient retention, and carbon sequestration ( p<0.005). The negative effects of the urbanization process on providing and regulating services are also identified through a comparison of the ecosystem services in large and small cities. Regression analysis was used to compare and elucidate the relative significance of the selected urbanization factors to ecosystem services. The results indicate that urbanization level is the most substantial factor inversely correlated with crop production ( R 2 = 0.414) and nutrient retention services ( R 2 = 0.572). Population density is the most important factor that negatively affects carbon sequestration ( R 2 = 0.447). The findings of this study suggest the potential relevance of ecosystem service dynamics to urbanization management and decision making.

  18. Analyzing seasonal patterns of wildfire exposure factors in Sardinia, Italy.

    Science.gov (United States)

    Salis, Michele; Ager, Alan A; Alcasena, Fermin J; Arca, Bachisio; Finney, Mark A; Pellizzaro, Grazia; Spano, Donatella

    2015-01-01

    In this paper, we applied landscape scale wildfire simulation modeling to explore the spatiotemporal patterns of wildfire likelihood and intensity in the island of Sardinia (Italy). We also performed wildfire exposure analysis for selected highly valued resources on the island to identify areas characterized by high risk. We observed substantial variation in burn probability, fire size, and flame length among time periods within the fire season, which starts in early June and ends in late September. Peak burn probability and flame length were observed in late July. We found that patterns of wildfire likelihood and intensity were mainly related to spatiotemporal variation in ignition locations, fuel moisture, and wind vectors. Our modeling approach allowed consideration of historical patterns of winds, ignition locations, and live and dead fuel moisture on fire exposure factors. The methodology proposed can be useful for analyzing potential wildfire risk and effects at landscape scale, evaluating historical changes and future trends in wildfire exposure, as well as for addressing and informing fuel management and risk mitigation issues.

  19. Temporal changes in spatial patterns of submersed macrophytes in two impounded reaches of the Upper Mississippi River, USA, 1998-2009

    Science.gov (United States)

    De Jager, Nathan R.; Yin, Yao

    2011-01-01

    We examined temporal changes in spatial patterns of submersed aquatic macrophytes during a recent three-fold increase in macrophyte abundance and in response to the cumulative effects of management actions (island construction and water level management) and changes in regional environmental conditions (turbidity) in two navigation pools of the Upper Mississippi River, Pool 8 (managed) and Pool 13 (unmanaged). We used cross-correlograms to quantify changes in the degree and range of spatial correlation between submersed macrophytes and depth across the impounded portions of the two pools from 1998-2009. Along with increases in abundance, we observed gradual expansion of submersed macrophytes into deeper water in both pools. However, we detected no temporal change in spatial patterns in Pool 13, where the range of spatial correlation was ~ 1500-2500 m in length in the downriver direction and ~ 500-1000 m in length in the crossriver direction. We initially detected similar ranges of spatial correlation in Pool 8, but over time the range of correlation in the cross river direction increased from ~ 500 m in 1998 to ~ 2000 m by 2009. Thus, the expansion of submersed macrophytes into deeper water areas in Pool 8 appears to have occurred in the cross-river direction and led to increases in patch size and a more symmetrical patch configuration. Hence, very similar temporal changes in submersed macrophyte abundance corresponded with different diffusion dynamics and spatial patterns in the two pools. We hypothesize that management actions altered spatial patterns of depth, water flow and/or wind fetch and led to the differences in spatial patterns reported here.

  20. [Spatial scale effect of urban land use landscape pattern in Shanghai City].

    Science.gov (United States)

    Xu, Li-Hua; Yue, Wen Ze; Cao, Yu

    2007-12-01

    Based on geographic information system (GIS) and remote sensing (RS) techniques, the landscape classes of urban land use in Shanghai City were extracted from SPOT images with 5 m spatial resolution in 2002, and then, the classified data were applied to quantitatively explore the change patterns of several basic landscape metrics at different scales. The results indicated that landscape metrics were sensitive to grain- and extent variance. Urban landscape pattern was spatially dependent. In other words, different landscape metrics showed different responses to scale. The resolution of 40 m was an intrinsic observing scale for urban landscape in Shanghai City since landscape metrics showed random characteristics while the grain was less than 40 m. The extent of 24 km was a symbol scale in a series of extents, which was consistent with the boundary between urban built-up area and suburban area in Shanghai City. As a result, the extent of 12 km away from urban center would be an intrinsic handle scale for urban landscape in Shanghai City. However, due to the complexity of urban structure and asymmetry of urban spatial expansion, the intrinsic handle scale was not regular extent, and the square with size of 24 km was just an approximate intrinsic extent for Shanghai City.

  1. The role of landscape spatial patterns on obesity in Hispanic children residing in inner-city neighborhoods.

    Science.gov (United States)

    Kim, Jun-Hyun; Lee, Chanam; Olvara, Norma E; Ellis, Christopher D

    2014-11-01

    Childhood obesity and its comorbidities have become major public health challenges in the US. While previous studies have investigated the roles of land uses and transportation infrastructure on obesity, limited research has examined the influence of landscape spatial patterns. The purpose of this study was to examine the association between landscape spatial patterns and obesity in Hispanic children. Participants included 61 fourth- and fifth-grade Hispanic children from inner-city neighborhoods in Houston, TX. BMI z-scores were computed based on objectively-measured height and weight from each child. Parental and child surveys provided sociodemographic and physical activity data. Landscape indices were used to measure the quality of landscape spatial patterns surrounding each child's home by utilizing Geographic Information Systems and remote sensing analyses using aerial photo images. After controlling for sociodemographic factors, in the half-mile airline buffer, more tree patches and well-connected landscape patterns were negatively correlated with their BMI z-scores. Furthermore, larger sizes of urban forests and tree patches were negatively associated with children's BMI z-scores in the half-mile network buffer assessment. This study suggests that urban greenery requires further attention in studies aimed at identifying environmental features that reduce childhood obesity.

  2. Combining evolutionary game theory and network theory to analyze human cooperation patterns

    International Nuclear Information System (INIS)

    Scatà, Marialisa; Di Stefano, Alessandro; La Corte, Aurelio; Liò, Pietro; Catania, Emanuele; Guardo, Ermanno; Pagano, Salvatore

    2016-01-01

    Highlights: • We investigate the evolutionary dynamics of human cooperation in a social network. • We introduce the concepts of “Critical Mass”, centrality measure and homophily. • The emergence of cooperation is affected by the spatial choice of the “Critical Mass”. • Our findings show that homophily speeds up the convergence towards cooperation. • Centrality and “Critical Mass” spatial choice partially offset the impact of homophily. - Abstract: As natural systems continuously evolve, the human cooperation dilemma represents an increasingly more challenging question. Humans cooperate in natural and social systems, but how it happens and what are the mechanisms which rule the emergence of cooperation, represent an open and fascinating issue. In this work, we investigate the evolution of cooperation through the analysis of the evolutionary dynamics of behaviours within the social network, where nodes can choose to cooperate or defect following the classical social dilemmas represented by Prisoner’s Dilemma and Snowdrift games. To this aim, we introduce a sociological concept and statistical estimator, “Critical Mass”, to detect the minimum initial seed of cooperators able to trigger the diffusion process, and the centrality measure to select within the social network. Selecting different spatial configurations of the Critical Mass nodes, we highlight how the emergence of cooperation can be influenced by this spatial choice of the initial core in the network. Moreover, we target to shed light how the concept of homophily, a social shaping factor for which “birds of a feather flock together”, can affect the evolutionary process. Our findings show that homophily allows speeding up the diffusion process and make quicker the convergence towards human cooperation, while centrality measure and thus the Critical Mass selection, play a key role in the evolution showing how the spatial configurations can create some hidden patterns, partially

  3. Using Multi-Temporal Remote Sensing Data to Analyze the Spatio-Temporal Patterns of Dry Season Rice Production in Bangladesh

    Science.gov (United States)

    Shew, A. M.; Ghosh, A.

    2017-10-01

    Remote sensing in the optical domain is widely used in agricultural monitoring; however, such initiatives pose a challenge for developing countries due to a lack of high quality in situ information. Our proposed methodology could help developing countries bridge this gap by demonstrating the potential to quantify patterns of dry season rice production in Bangladesh. To analyze approximately 90,000 km2 of cultivated land in Bangladesh at 30 m spatial resolution, we used two decades of remote sensing data from the Landsat archive and Google Earth Engine (GEE), a cloud-based geospatial data analysis platform built on Google infrastructure and capable of processing petabyte-scale remote sensing data. We reconstructed the seasonal patterns of vegetation indices (VIs) for each pixel using a harmonic time series (HTS) model, which minimizes the effects of missing observations and noise. Next, we combined the seasonality information of VIs with our knowledge of rice cultivation systems in Bangladesh to delineate rice areas in the dry season, which are predominantly hybrid and High Yielding Varieties (HYV). Based on historical Landsat imagery, the harmonic time series of vegetation indices (HTS-VIs) model estimated 4.605 million ha, 3.519 million ha, and 4.021 million ha of rice production for Bangladesh in 2005, 2010, and 2015 respectively. Fine spatial scale information on HYV rice over the last 20 years will greatly improve our understanding of double-cropped rice systems, current status of production, and potential for HYV rice adoption in Bangladesh during the dry season.

  4. Spatial distribution of seeds and seedlings of two tropical tree species: Is there correspondence between patterns?

    International Nuclear Information System (INIS)

    Parrado Rosselli, Angela

    2007-01-01

    The spatial patterns of seed and seedling distribution relative to parent trees (seed and seedling shadow, respectively) were studied for Dacryodes chimantensis (Burseraceae) and Brosimum utile (Moraceae), two common tree species of terra firme forests of Colombian Amazonia. The general objective was to assess whether the patterns imposed by seed dispersal change or persist in subsequent life stages occurring during the transition from seeds/saplings to adult stages. Seed and seedling shadows on the ground were characterized for each tree species along four 50-m radial transects from the base of the parent tree. Causes of seed and seedling predation as a function of distance to the parent tree were determined, as well as the spatial consistency between life stages. Results showed that seed density of both Dacryodes and Brosimum declined leptokurtically with distance, and it was skewed towards the parent tree. However, seed density was more skewed and leptokurtic in Dacryodes than in Brosimum. The overall trend was maintained in the seedling stage of both species and was positively correlated with the distribution patterns of seeds. Seed and seedling predation were positively correlated with density and negatively correlated with the distance from the parent tree. Factors that could be generating the high consistency between the spatial patterns of seed and seedling distribution are discussed, as well as its implications in the population structure of both species and the debate on the factors that influence the spatial distribution of plant species in tropical rain forests.

  5. [Spatial distribution pattern and allometric growth of three common species on moving sand dunes in Horqin Sandy Land, China].

    Science.gov (United States)

    Jia, Mei-yu; Li, Xue-hua; Oh, Choong-hyeon; Park, Hong-chul; Miao, Chun-ping; Han, Xu

    2015-10-01

    Research on fine scale pattern and characteristics of allometric growth could contribute to better understanding plants' adaptation in moving sandy dunes. The abundance, height and biomass of 3 species Agriophilum aquarrosum, Corispermum candelabrum and Setaria viridis in twenty-eight 1 m x 1 m quadrats of Horqin Sandy Land were identified, mapped and described. The nearest neighbor method and O-ring O(r) function analysis were applied to analyze the spatial patterns. The results showed that the individual spatial pattern was mainly aggregated in 1 m x 1 m quadrat at community level but mainly random at population level. At 0-50 cm individual distance scale, both intraspecific and interspecific relationship were facilitation and aggregated distribution occurred at some scales and varied with increasing plant abundance in 1 m x 1 m quadrat. In 0-40 cm, the aggregated distribution of S. viridis and A. aquarrosum increased obviously; in 10-20 cm, both intraspecific and interspecific aggregation increased; in 10-30 cm, the occurrence possibility of positive correlations between S. viridis and A. aquarrosum, S. viridis and C. candelabrum all increased; in 40-50 cm, the possibility of positive correlations between A. squarrosum and S. viridis, A. squarrosum and C. candelabrum all increased. Research on the three species components indicated that the growth rate of above-ground was faster than that of underground. S. viridis had the highest ratio of under-ground biomass to above-ground biomass but its nutritional organs' biomass ratio was medium. C. candelabrum allocated more biomass to propagative organs and stem, but A. squarrosum allocated more biomass to nutritional organs. Based on the spatial distribution and allometric characteristics, the three common species in moving sand dunes preferred r strategy in their life history.

  6. Spatial-Temporal Hotspot Pattern Analysis of Provincial Environmental Pollution Incidents and Related Regional Sustainable Management in China in the Period 1995–2012

    Directory of Open Access Journals (Sweden)

    Lei Ding

    2015-10-01

    Full Text Available Spatial-temporal hotspot pattern analysis of environmental pollution incidents provides an indispensable source of information for the further development of incident prevention measures. In this study, the spatial-temporal patterns of environmental pollution incidents in China in the period of 1995–2012 were analyzed, using the Spatial Getis-Ord statistic and an Improved Prediction Accuracy Index (IAPI. The results show that, in this period, the occurrence of environmental incidents exhibited a dynamic growth pattern but then dropped and continued to drop after the year 2006, which was considered a crucial turning point. Not coincidentally, this corresponds to the year when the State Council issued its National Environmental Emergency Plan, and following the examination of major incidents, special actions were taken to strengthen the control of incidents and emergency responses. The results from Getis-Ord General G statistical analysis show that the spatial agglomeration phenomenon was statistically significant after 1999 and that the level of spatial agglomeration was rising, while the Getis-Ord Gi* statistical analysis reveals that environmental pollution incidents were mainly agglomerated in the Pan Yangtze River Delta and Pan Pearl River Delta regions. Accordingly, the spatial-temporal hotspot pattern based on the IAPI values at the provincial scale could be categorized into: stable hotspots, unstable hotspots, and cold-spot areas. The stable hotspots category was further divided into three subtypes: industrial distribution type, industrial transfer type, and extensive economic growth type. Finally, the corresponding measures for sustainable management were proposed: stable hotspots were classified as essential regions requiring the immediate prevention and control of environmental pollution incidents; unstable hotspots were characterized by their need for ongoing and continual prevention measures, and cold-spots were those areas that

  7. Density, Spatial Pattern and Relief Features of Sacred Sites in Northern Morocco

    Directory of Open Access Journals (Sweden)

    Holger Jäckle

    2013-02-01

    Full Text Available Sacred sites are of conservation value because of their spiritual meaning, as cultural heritage and as remnants of near-natural biotopes in landscapes strongly transformed by man. The vegetation of sacred sites in Morocco was studied recently. Information about their number, spatial pattern or relief position is fragmentary. However, these parameters are important to evaluate their role as refuge for organisms and their representativeness of potential natural vegetation. Therefore, density and spatial pattern of sacred sites on the Tangier Peninsula in NW Morocco were studied based on records on topographic maps and by ground check. Their relief position was examined calculating a logistic regression model based on site-presences and random pseudo-absences. A ground check showed that around 67% of the existing sacred sites are documented in the topographic maps. They occur in the whole study area but are agglomerated around settlements. Although sacred sites occur with preference at elevated sites they can be found in almost all relief positions, thus offering the potential of supporting different types of climax vegetation (climatic climax and pedoclimax. Because of their abundance (around 29 sacred sites / 100 km² and their distribution pattern they could serve as elements of a biotope network in degraded landscapes.

  8. Spatial and temporal patterns of human Puumala virus (PUUV infections in Germany

    Directory of Open Access Journals (Sweden)

    Sarah Cunze

    2018-02-01

    Full Text Available Background Worldwide, the number of recorded human hantavirus infections as well as the number of affected countries is on the rise. In Europe, most human hantavirus infections are caused by the Puumala virus (PUUV, with bank voles (Myodes glareolus as reservoir hosts. Generally, infection outbreaks have been related to environmental conditions, particularly climatic conditions, food supply for the reservoir species and land use. However, although attempts have been made, the insufficient availability of environmental data is often hampering accurate temporal and spatially explicit models of human hantavirus infections. Methods In the present study, dynamics of human PUUV infections between 2001 and 2015 were explored using ArcGIS in order to identify spatio-temporal patterns. Results Percentage cover of forest area was identified as an important factor for the spatial pattern, whereas beech mast was found explaining temporal patterns of human PUUV infections in Germany. High numbers of infections were recorded in 2007, 2010 and 2012 and areas with highest records were located in Baden-Wuerttemberg (southwest Germany and North Rhine-Westphalia (western Germany. Conclusion More reliable data on reservoir host distribution, pathogen verification as well as an increased awareness of physicians are some of the factors that should improve future human infection risk assessments in Germany.

  9. Spatial and Temporal Patterns of Land Loss in Mississippi River Delta

    Science.gov (United States)

    Roy, S.; Edmonds, D. A.; Robeson, S. M.; Ortiz, A. C.; Nienhuis, J.

    2017-12-01

    Land loss across the Louisiana coast is predicted to exceed 10,000 km2 by 2100. An estimated 18-24 billion tons of sediment is needed to offset land loss, but available sediment supply from the Mississippi River falls short. As a result, coastal restoration plans must target certain areas, which highlight the importance of understanding the processes and patterns of land loss. In this study, we use remote sensing to investigate and quantify land loss patterns, as well as the corresponding morphology of the land segments that are lost. Using Google Earth Engine, we combined over 10,000 time-series Landsat imagery in the Mississippi River Delta to create twelve, three-year composites from 1983 to 2016. We then spectrally unmixed each pixel into land and water percentages, and create land-water binaries. Stratifying by hydrologic unit code boundaries and local subsidence rates, we analyze the land loss pixels using landscape metrics. Our results show that the total loss from 1983-2016 for our area of interest was 908.02 km2 (loss of 5.84%) and total land area was 6855.63 km2 (49.97 % of total area) in 2016 compared to 7763.65 km2 (44.13%) in 1983 consistent with previous estimates for our study area. Land loss pixels have a low patch density (mean of 4.80 patches/ha) and high aggregation indices (mean of 47.15), which indicates that land-loss pixels tend to clump together. The shape index of these clumped pixels are also low (mean of 2.32), which points towards long, narrow patches and edges. Local indicator of spatial autocorrelation (LISA) areas was applied to determine areas of high positive autocorrelation within the loss pixels which reinforced loss across edges. Based on spatial metrics and subsidence grid based analysis on the temporal pattern of land loss pixels we find that i) land change (both growth and loss pixels) occurs along the marsh, lake and coastal edges rather than inland; ii) subsidence, though positively correlated with landloss, is no longer the

  10. Dry limit to photosynthesis and cyanobacterial spatial pattern in the Atacama Desert

    Science.gov (United States)

    Warren-Rhodes, K. A.; Pointing, S. B.; Ewing, S.; Lacap, D.; Gomez-Silva, B.; Amundson, R.; Friedmann, E. I.; McKay, C. P.

    2005-12-01

    Hypolithic autotrophs inhabit translucent rocks in the world`'s most extreme hot and cold deserts. Across a rainfall gradient in the Atacama, we measured a three-fold decline in the molecular diversity of cyanobacterial communities and a drop in their abundance from 28% in relatively wet sites to 0.08% in the driest core. Like plants, hypoliths appear to exhibit traits of self-organized patchiness (aggregated spatial patterns) that tightly correlate with rainfall. Rare cyanobacteria in the core live slowly (3,200 y turnover times) and survive in spatially isolated patches of self-augmented fertility, with the dry limit to their survival occurring at ~Mars but may have existed in rare oases in the past. The spatial distributions of terrestrial desert microbes should be considered in the remote search for life on Mars.

  11. Research on the Spatial-Temporal Distribution Pattern of the Network Attention of Fog and Haze in China

    Science.gov (United States)

    Weng, Lingyan; Han, Xugao

    2018-01-01

    Understanding the spatial-temporal distribution pattern of fog and haze is the base to deal with them by adjusting measures to local conditions. Taking 31 provinces in China mainland as the research areas, this paper collected data from Baidu index on the network attention of fog and haze in relevant areas from 2011 to 2016, and conducted an analysis of their spatial-temporal distribution pattern by using autocorrelation analysis. The results show that the network attention of fog and haze has an overall spatial distribution pattern of “higher in the eastern and central, lower in the western China”. There are regional differences in different provinces in terms of network attention. Network attention of fog and haze indicates an obvious geographical agglomeration phenomenon, which is a gradual enlargement of the agglomeration area of higher value with a slight shrinking of those lower value agglomeration areas.

  12. Response of coral assemblages to thermal stress: are bleaching intensity and spatial patterns consistent between events?

    Science.gov (United States)

    Penin, Lucie; Vidal-Dupiol, Jeremie; Adjeroud, Mehdi

    2013-06-01

    Mass bleaching events resulting in coral mortality are among the greatest threats to coral reefs, and are projected to increase in frequency and intensity with global warming. Achieving a better understanding of the consistency of the response of coral assemblages to thermal stress, both spatially and temporally, is essential to determine which reefs are more able to tolerate climate change. We compared variations in spatial and taxonomic patterns between two bleaching events at the scale of an island (Moorea Island, French Polynesia). Despite similar thermal stress and light conditions, bleaching intensity was significantly lower in 2007 (approximately 37 % of colonies showed signs of bleaching) than in 2002, when 55 % of the colonies bleached. Variations in the spatial patterns of bleaching intensity were consistent between the two events. Among nine sampling stations at three locations and three depths, the stations at which the bleaching response was lowest in 2002 were those that showed the lowest levels of bleaching in 2007. The taxonomic patterns of susceptibility to bleaching were also consistent between the two events. These findings have important implications for conservation because they indicate that corals are capable of acclimatization and/or adaptation and that, even at small spatial scales, some areas are consistently more susceptible to bleaching than others.

  13. Spatial and temporal patterns of stranded intertidal marine debris: is there a picture of global change?

    Science.gov (United States)

    Browne, Mark Anthony; Chapman, M Gee; Thompson, Richard C; Amaral Zettler, Linda A; Jambeck, Jenna; Mallos, Nicholas J

    2015-06-16

    Floating and stranded marine debris is widespread. Increasing sea levels and altered rainfall, solar radiation, wind speed, waves, and oceanic currents associated with climatic change are likely to transfer more debris from coastal cities into marine and coastal habitats. Marine debris causes economic and ecological impacts, but understanding the scope of these requires quantitative information on spatial patterns and trends in the amounts and types of debris at a global scale. There are very few large-scale programs to measure debris, but many peer-reviewed and published scientific studies of marine debris describe local patterns. Unfortunately, methods of defining debris, sampling, and interpreting patterns in space or time vary considerably among studies, yet if data could be synthesized across studies, a global picture of the problem may be avaliable. We analyzed 104 published scientific papers on marine debris in order to determine how to evaluate this. Although many studies were well designed to answer specific questions, definitions of what constitutes marine debris, the methods used to measure, and the scale of the scope of the studies means that no general picture can emerge from this wealth of data. These problems are detailed to guide future studies and guidelines provided to enable the collection of more comparable data to better manage this growing problem.

  14. The pattern of spatial flood disaster region in DKI Jakarta

    Science.gov (United States)

    Tambunan, M. P.

    2017-02-01

    The study of disaster flood area was conducted in DKI Jakarta Province, Indonesia. The aim of this research is: to study the spatial distribution of potential and actual of flood area The flood was studied from the geographic point of view using spatial approach, while the study of the location, the distribution, the depth and the duration of flooding was conducted using geomorphologic approach and emphasize on the detailed landform unit as analysis unit. In this study the landforms in DKI Jakarta have been a diversity, as well as spatial and temporal pattern of the actual and potential flood area. Landform at DKI Jakarta has been largely used as built up area for settlement and it facilities, thus affecting the distribution pattern of flooding area. The collection of the physical condition of landform in DKI Jakarta data prone were conducted through interpretation of the topographic map / RBI map and geological map. The flood data were obtained by survey and secondary data from Kimpraswil (Public Work) of DKI Jakarta Province for 3 years (1996, 2002, and 2007). Data of rainfall were obtained from BMKG and land use data were obtained from BPN DKI Jakarta. The analysis of the causal factors and distribution of flooding was made spatially and temporally using geographic information system. This study used survey method with a pragmatic approach. In this study landform as result from the analytical survey was settlement land use as result the synthetic survey. The primary data consist of landform, and the flood characteristic obtained by survey. The samples were using purposive sampling. Landform map was composed by relief, structure and material stone, and process data Landform map was overlay with flood map the flood prone area in DKI Jakarta Province in scale 1:50,000 to show. Descriptive analysis was used the spatial distribute of the flood prone area. The result of the study show that actual of flood prone area in the north, west and east of Jakarta lowland both

  15. Multisubject Learning for Common Spatial Patterns in Motor-Imagery BCI

    Directory of Open Access Journals (Sweden)

    Dieter Devlaminck

    2011-01-01

    Full Text Available Motor-imagery-based brain-computer interfaces (BCIs commonly use the common spatial pattern filter (CSP as preprocessing step before feature extraction and classification. The CSP method is a supervised algorithm and therefore needs subject-specific training data for calibration, which is very time consuming to collect. In order to reduce the amount of calibration data that is needed for a new subject, one can apply multitask (from now on called multisubject machine learning techniques to the preprocessing phase. Here, the goal of multisubject learning is to learn a spatial filter for a new subject based on its own data and that of other subjects. This paper outlines the details of the multitask CSP algorithm and shows results on two data sets. In certain subjects a clear improvement can be seen, especially when the number of training trials is relatively low.

  16. Determination of Areas Susceptible to Landsliding Using Spatial Patterns of Rainfall from Tropical Rainfall Measuring Mission Data, Rio de Janeiro, Brazil

    Directory of Open Access Journals (Sweden)

    Renato Fontes Guimarães

    2017-10-01

    Full Text Available Spatial patterns of shallow landslide initiation reflect both spatial patterns of heavy rainfall and areas susceptible to mass movements. We determine the areas most susceptible to shallow landslide occurrence through the calculation of critical soil cohesion and spatial patterns of rainfall derived from TRMM (Tropical Rainfall Measuring Mission data for Paraty County, State of Rio de Janeiro, Brazil. Our methodology involved: (a creating the digital elevation model (DEM and deriving attributes such as slope and contributing area; (b incorporating spatial patterns of rainfall derived from TRMM into the shallow slope stability model SHALSTAB; and (c quantitative assessment of the correspondence of mapped landslide scars to areas predicted to be most prone to shallow landsliding. We found that around 70% of the landslide scars occurred in less than 10% of the study area identified as potentially unstable. The greatest concentration of landslides occurred in areas where the root strength of vegetation is an important contribution to slope stability in regions of orographically-enhanced rainfall on the coastal topographic flank. This approach helps quantify landslide hazards in areas with similar geomorphological characteristics, but different spatial patterns of rainfall.

  17. The spatial pattern of leaf phenology and its response to climate change in China.

    Science.gov (United States)

    Dai, Junhu; Wang, Huanjiong; Ge, Quansheng

    2014-05-01

    Leaf phenology has been shown to be one of the most important indicators of the effects of climate change on biological systems. Few such studies have, however, been published detailing the relationship between phenology and climate change in Asian contexts. With the aim of quantifying species' phenological responsiveness to temperature and deepening understandings of spatial patterns of phenological and climate change in China, this study analyzes the first leaf date (FLD) and the leaf coloring date (LCD) from datasets of four woody plant species, Robinia pseudoacacia, Ulmus pumila, Salix babylonica, and Melia azedarach, collected from 1963 to 2009 at 47 Chinese Phenological Observation Network (CPON) stations spread across China (from 21° to 50° N). The results of this study show that changes in temperatures in the range of 39-43 days preceding the date of FLD of these plants affected annual variations in FLD, while annual variations in temperature in the range of 71-85 days preceding LCD of these plants affected the date of LCD. Average temperature sensitivity of FLD and LCD for these plants was -3.93 to 3.30 days °C(-1) and 2.11 to 4.43 days °C⁻¹, respectively. Temperature sensitivity of FLD was found to be stronger at lower latitudes or altitude as well as in more continental climates, while the response of LCD showed no consistent pattern. Within the context of significant warming across China during the study period, FLD was found to have advanced by 5.44 days from 1960 to 2009; over the same period, LCD was found to have been delayed by 4.56 days. These findings indicate that the length of the growing season of the four plant species studied was extended by a total of 10.00 days from 1960 to 2009. They also indicate that phenological response to climate is highly heterogeneous spatially.

  18. Spatial patterns of FUS-immunoreactive neuronal cytoplasmic inclusions (NCI) in neuronal intermediate filament inclusion disease (NIFID).

    Science.gov (United States)

    Armstrong, Richard A; Gearing, Marla; Bigio, Eileen H; Cruz-Sanchez, Felix F; Duyckaerts, Charles; Mackenzie, Ian R A; Perry, Robert H; Skullerud, Kari; Yokoo, Hideaki; Cairns, Nigel J

    2011-11-01

    Neuronal intermediate filament inclusion disease (NIFID), a rare form of frontotemporal lobar degeneration (FTLD), is characterized neuropathologically by focal atrophy of the frontal and temporal lobes, neuronal loss, gliosis, and neuronal cytoplasmic inclusions (NCI) containing epitopes of ubiquitin and neuronal intermediate filament (IF) proteins. Recently, the 'fused in sarcoma' (FUS) protein (encoded by the FUS gene) has been shown to be a component of the inclusions of NIFID. To further characterize FUS proteinopathy in NIFID, we studied the spatial patterns of the FUS-immunoreactive NCI in frontal and temporal cortex of 10 cases. In the cerebral cortex, sectors CA1/2 of the hippocampus, and the dentate gyrus (DG), the FUS-immunoreactive NCI were frequently clustered and the clusters were regularly distributed parallel to the tissue boundary. In a proportion of cortical gyri, cluster size of the NCI approximated to those of the columns of cells was associated with the cortico-cortical projections. There were no significant differences in the frequency of different types of spatial patterns with disease duration or disease stage. Clusters of NCI in the upper and lower cortex were significantly larger using FUS compared with phosphorylated, neurofilament heavy polypeptide (NEFH) or α-internexin (INA) immunohistochemistry (IHC). We concluded: (1) FUS-immunoreactive NCI exhibit similar spatial patterns to analogous inclusions in the tauopathies and synucleinopathies, (2) clusters of FUS-immunoreactive NCI are larger than those revealed by NEFH or ΙΝΑ, and (3) the spatial patterns of the FUS-immunoreactive NCI suggest the degeneration of the cortico-cortical projections in NIFID.

  19. Physically-based modeling of topographic effects on spatial evapotranspiration and soil moisture patterns through radiation and wind

    Directory of Open Access Journals (Sweden)

    M. Liu

    2012-02-01

    Full Text Available In this paper, simulations with the Soil Water Atmosphere Plant (SWAP model are performed to quantify the spatial variability of both potential and actual evapotranspiration (ET, and soil moisture content (SMC caused by topography-induced spatial wind and radiation differences. To obtain the spatially distributed ET/SMC patterns, the field scale SWAP model is applied in a distributed way for both pointwise and catchment wide simulations. An adapted radiation model from r.sun and the physically-based meso-scale wind model METRAS PC are applied to obtain the spatial radiation and wind patterns respectively, which show significant spatial variation and correlation with aspect and elevation respectively. Such topographic dependences and spatial variations further propagate to ET/SMC. A strong spatial, seasonal-dependent, scale-relevant intra-catchment variability in daily/annual ET and less variability in SMC can be observed from the numerical experiments. The study concludes that topography has a significant effect on ET/SMC in the humid region where ET is a energy limited rather than water availability limited process. It affects the spatial runoff generation through spatial radiation and wind, therefore should be applied to inform hydrological model development. In addition, the methodology used in the study can serve as a general method for physically-based ET estimation for data sparse regions.

  20. Quantifying spatial and temporal trends in beach-dune volumetric changes using spatial statistics

    Science.gov (United States)

    Eamer, Jordan B. R.; Walker, Ian J.

    2013-06-01

    Spatial statistics are generally underutilized in coastal geomorphology, despite offering great potential for identifying and quantifying spatial-temporal trends in landscape morphodynamics. In particular, local Moran's Ii provides a statistical framework for detecting clusters of significant change in an attribute (e.g., surface erosion or deposition) and quantifying how this changes over space and time. This study analyzes and interprets spatial-temporal patterns in sediment volume changes in a beach-foredune-transgressive dune complex following removal of invasive marram grass (Ammophila spp.). Results are derived by detecting significant changes in post-removal repeat DEMs derived from topographic surveys and airborne LiDAR. The study site was separated into discrete, linked geomorphic units (beach, foredune, transgressive dune complex) to facilitate sub-landscape scale analysis of volumetric change and sediment budget responses. Difference surfaces derived from a pixel-subtraction algorithm between interval DEMs and the LiDAR baseline DEM were filtered using the local Moran's Ii method and two different spatial weights (1.5 and 5 m) to detect statistically significant change. Moran's Ii results were compared with those derived from a more spatially uniform statistical method that uses a simpler student's t distribution threshold for change detection. Morphodynamic patterns and volumetric estimates were similar between the uniform geostatistical method and Moran's Ii at a spatial weight of 5 m while the smaller spatial weight (1.5 m) consistently indicated volumetric changes of less magnitude. The larger 5 m spatial weight was most representative of broader site morphodynamics and spatial patterns while the smaller spatial weight provided volumetric changes consistent with field observations. All methods showed foredune deflation immediately following removal with increased sediment volumes into the spring via deposition at the crest and on lobes in the lee

  1. Contrasting spatial patterns in active-fire and fire-suppressed Mediterranean climate old-growth mixed conifer forests

    Science.gov (United States)

    Danny L. Fry; Scott L. Stephens; Brandon M. Collins; Malcolm North; Ernesto Franco-Vizcaino; Samantha J. Gill

    2014-01-01

    In Mediterranean environments in western North America, historic fire regimes in frequent-fire conifer forests are highly variable both temporally and spatially. This complexity influenced forest structure and spatial patterns, but some of this diversity has been lost due to anthropogenic disruption of ecosystem processes, including fire. Information from reference...

  2. Postfire environmental conditions influence the spatial pattern of regeneration for Pinus ponderosa

    Science.gov (United States)

    V. H. Bonnet; Anna Schoettle; W. D. Shepperd

    2005-01-01

    Regeneration of ponderosa pine after fire depends on the patterns of seed availability and the environmental conditions that define safe sites for seedling establishment. A transect approach was applied in 2002 to determine the spatial distribution of regeneration from unburned to burned areas within the landscape impacted by the Jasper Fire of 2000 in the...

  3. Spatial and temporal patterns in preterm birth in the United States.

    Science.gov (United States)

    Byrnes, John; Mahoney, Richard; Quaintance, Cele; Gould, Jeffrey B; Carmichael, Suzan; Shaw, Gary M; Showen, Amy; Phibbs, Ciaran; Stevenson, David K; Wise, Paul H

    2015-06-01

    Despite years of research, the etiologies of preterm birth remain unclear. In order to help generate new research hypotheses, this study explored spatial and temporal patterns of preterm birth in a large, total-population dataset. Data on 145 million US births in 3,000 counties from the Natality Files of the National Center for Health Statistics for 1971-2011 were examined. State trends in early (birth rates were compared. K-means cluster analyses were conducted to identify gestational age distribution patterns for all US counties over time. A weak association was observed between state trends in birth rates and the initial absolute birth rate. Significant associations were observed between trends in birth rates and between white and African American births. Periodicity was observed in county-level trends in birth rates. Cluster analyses identified periods of significant heterogeneity and homogeneity in gestational age distributional trends for US counties. The observed geographic and temporal patterns suggest periodicity and complex, shared influences among preterm birth rates in the United States. These patterns could provide insight into promising hypotheses for further research.

  4. Evaluation of Spatial Pattern of Altered Flow Regimes on a River Network Using a Distributed Hydrological Model.

    Science.gov (United States)

    Ryo, Masahiro; Iwasaki, Yuichi; Yoshimura, Chihiro; Saavedra V, Oliver C

    2015-01-01

    Alteration of the spatial variability of natural flow regimes has been less studied than that of the temporal variability, despite its ecological importance for river ecosystems. Here, we aimed to quantify the spatial patterns of flow regime alterations along a river network in the Sagami River, Japan, by estimating river discharge under natural and altered flow conditions. We used a distributed hydrological model, which simulates hydrological processes spatiotemporally, to estimate 20-year daily river discharge along the river network. Then, 33 hydrologic indices (i.e., Indicators of Hydrologic Alteration) were calculated from the simulated discharge to estimate the spatial patterns of their alterations. Some hydrologic indices were relatively well estimated such as the magnitude and timing of maximum flows, monthly median flows, and the frequency of low and high flow pulses. The accuracy was evaluated with correlation analysis (r > 0.4) and the Kolmogorov-Smirnov test (α = 0.05) by comparing these indices calculated from both observed and simulated discharge. The spatial patterns of the flow regime alterations varied depending on the hydrologic indices. For example, both the median flow in August and the frequency of high flow pulses were reduced by the maximum of approximately 70%, but these strongest alterations were detected at different locations (i.e., on the mainstream and the tributary, respectively). These results are likely caused by different operational purposes of multiple water control facilities. The results imply that the evaluation only at discharge gauges is insufficient to capture the alteration of the flow regime. Our findings clearly emphasize the importance of evaluating the spatial pattern of flow regime alteration on a river network where its discharge is affected by multiple water control facilities.

  5. Hydrogeological controls on spatial patterns of groundwater discharge in peatlands

    Directory of Open Access Journals (Sweden)

    D. K. Hare

    2017-11-01

    Full Text Available Peatland environments provide important ecosystem services including water and carbon storage, nutrient processing and retention, and wildlife habitat. However, these systems and the services they provide have been degraded through historical anthropogenic agricultural conversion and dewatering practices. Effective wetland restoration requires incorporating site hydrology and understanding groundwater discharge spatial patterns. Groundwater discharge maintains wetland ecosystems by providing relatively stable hydrologic conditions, nutrient inputs, and thermal buffering important for ecological structure and function; however, a comprehensive site-specific evaluation is rarely feasible for such resource-constrained projects. An improved process-based understanding of groundwater discharge in peatlands may help guide ecological restoration design without the need for invasive methodologies and detailed site-specific investigation. Here we examine a kettle-hole peatland in southeast Massachusetts historically modified for commercial cranberry farming. During the time of our investigation, a large process-based ecological restoration project was in the assessment and design phases. To gain insight into the drivers of site hydrology, we evaluated the spatial patterning of groundwater discharge and the subsurface structure of the peatland complex using heat-tracing methods and ground-penetrating radar. Our results illustrate that two groundwater discharge processes contribute to the peatland hydrologic system: diffuse lower-flux marginal matrix seepage and discrete higher-flux preferential-flow-path seepage. Both types of groundwater discharge develop through interactions with subsurface peatland basin structure, often where the basin slope is at a high angle to the regional groundwater gradient. These field observations indicate strong correlation between subsurface structures and surficial groundwater discharge. Understanding these general patterns

  6. Hydrogeological controls on spatial patterns of groundwater discharge in peatlands

    Science.gov (United States)

    Hare, Danielle K.; Boutt, David F.; Clement, William P.; Hatch, Christine E.; Davenport, Glorianna; Hackman, Alex

    2017-11-01

    Peatland environments provide important ecosystem services including water and carbon storage, nutrient processing and retention, and wildlife habitat. However, these systems and the services they provide have been degraded through historical anthropogenic agricultural conversion and dewatering practices. Effective wetland restoration requires incorporating site hydrology and understanding groundwater discharge spatial patterns. Groundwater discharge maintains wetland ecosystems by providing relatively stable hydrologic conditions, nutrient inputs, and thermal buffering important for ecological structure and function; however, a comprehensive site-specific evaluation is rarely feasible for such resource-constrained projects. An improved process-based understanding of groundwater discharge in peatlands may help guide ecological restoration design without the need for invasive methodologies and detailed site-specific investigation. Here we examine a kettle-hole peatland in southeast Massachusetts historically modified for commercial cranberry farming. During the time of our investigation, a large process-based ecological restoration project was in the assessment and design phases. To gain insight into the drivers of site hydrology, we evaluated the spatial patterning of groundwater discharge and the subsurface structure of the peatland complex using heat-tracing methods and ground-penetrating radar. Our results illustrate that two groundwater discharge processes contribute to the peatland hydrologic system: diffuse lower-flux marginal matrix seepage and discrete higher-flux preferential-flow-path seepage. Both types of groundwater discharge develop through interactions with subsurface peatland basin structure, often where the basin slope is at a high angle to the regional groundwater gradient. These field observations indicate strong correlation between subsurface structures and surficial groundwater discharge. Understanding these general patterns may allow resource

  7. Analysis of spatial relationships in three dimensions: tools for the study of nerve cell patterning

    Directory of Open Access Journals (Sweden)

    Raven Mary A

    2008-07-01

    Full Text Available Abstract Background Multiple technologies have been brought to bear on understanding the three-dimensional morphology of individual neurons and glia within the brain, but little progress has been made on understanding the rules controlling cellular patterning. We describe new matlab-based software tools, now available to the scientific community, permitting the calculation of spatial statistics associated with 3D point patterns. The analyses are largely derived from the Delaunay tessellation of the field, including the nearest neighbor and Voronoi domain analyses, and from the spatial autocorrelogram. Results Our tools enable the analysis of the spatial relationship between neurons within the central nervous system in 3D, and permit the modeling of these fields based on lattice-like simulations, and on simulations of minimal-distance spacing rules. Here we demonstrate the utility of our analysis methods to discriminate between two different simulated neuronal populations. Conclusion Together, these tools can be used to reveal the presence of nerve cell patterning and to model its foundation, in turn informing on the potential developmental mechanisms that govern its establishment. Furthermore, in conjunction with analyses of dendritic morphology, they can be used to determine the degree of dendritic coverage within a volume of tissue exhibited by mature nerve cells.

  8. Spatial epidemiological techniques in cholera mapping and analysis towards a local scale predictive modelling

    Science.gov (United States)

    Rasam, A. R. A.; Ghazali, R.; Noor, A. M. M.; Mohd, W. M. N. W.; Hamid, J. R. A.; Bazlan, M. J.; Ahmad, N.

    2014-02-01

    Cholera spatial epidemiology is the study of the spread and control of the disease spatial pattern and epidemics. Previous studies have shown that multi-factorial causation such as human behaviour, ecology and other infectious risk factors influence the disease outbreaks. Thus, understanding spatial pattern and possible interrelationship factors of the outbreaks are crucial to be explored an in-depth study. This study focuses on the integration of geographical information system (GIS) and epidemiological techniques in exploratory analyzing the cholera spatial pattern and distribution in the selected district of Sabah. Spatial Statistic and Pattern tools in ArcGIS and Microsoft Excel software were utilized to map and analyze the reported cholera cases and other data used. Meanwhile, cohort study in epidemiological technique was applied to investigate multiple outcomes of the disease exposure. The general spatial pattern of cholera was highly clustered showed the disease spread easily at a place or person to others especially 1500 meters from the infected person and locations. Although the cholera outbreaks in the districts are not critical, it could be endemic at the crowded areas, unhygienic environment, and close to contaminated water. It was also strongly believed that the coastal water of the study areas has possible relationship with the cholera transmission and phytoplankton bloom since the areas recorded higher cases. GIS demonstrates a vital spatial epidemiological technique in determining the distribution pattern and elucidating the hypotheses generating of the disease. The next research would be applying some advanced geo-analysis methods and other disease risk factors for producing a significant a local scale predictive risk model of the disease in Malaysia.

  9. Spatial epidemiological techniques in cholera mapping and analysis towards a local scale predictive modelling

    International Nuclear Information System (INIS)

    Rasam, A R A; Ghazali, R; Noor, A M M; Mohd, W M N W; Hamid, J R A; Bazlan, M J; Ahmad, N

    2014-01-01

    Cholera spatial epidemiology is the study of the spread and control of the disease spatial pattern and epidemics. Previous studies have shown that multi-factorial causation such as human behaviour, ecology and other infectious risk factors influence the disease outbreaks. Thus, understanding spatial pattern and possible interrelationship factors of the outbreaks are crucial to be explored an in-depth study. This study focuses on the integration of geographical information system (GIS) and epidemiological techniques in exploratory analyzing the cholera spatial pattern and distribution in the selected district of Sabah. Spatial Statistic and Pattern tools in ArcGIS and Microsoft Excel software were utilized to map and analyze the reported cholera cases and other data used. Meanwhile, cohort study in epidemiological technique was applied to investigate multiple outcomes of the disease exposure. The general spatial pattern of cholera was highly clustered showed the disease spread easily at a place or person to others especially 1500 meters from the infected person and locations. Although the cholera outbreaks in the districts are not critical, it could be endemic at the crowded areas, unhygienic environment, and close to contaminated water. It was also strongly believed that the coastal water of the study areas has possible relationship with the cholera transmission and phytoplankton bloom since the areas recorded higher cases. GIS demonstrates a vital spatial epidemiological technique in determining the distribution pattern and elucidating the hypotheses generating of the disease. The next research would be applying some advanced geo-analysis methods and other disease risk factors for producing a significant a local scale predictive risk model of the disease in Malaysia

  10. Complex temporal and spatial patterns in nonequilibrium processes. Progress report, December 1, 1987--November 30, 1992

    Energy Technology Data Exchange (ETDEWEB)

    Swinney, H.L.

    1992-10-01

    We have used dynamical systems methods to study and characterize bifurcations and pattern formation in a variety of nonequilibrium systems. In this paper we describe our work on dynamical systems, chemical oscillations and chaos, chemical spatial patterns, instabilities in fluid dynamics, electrodeposition clusters, the ballast resistor, and crack propagation.

  11. Simulating Spatial Growth Patterns in Developing Countries: A Case of Shama in the Western Region of Ghana.

    Science.gov (United States)

    Inkoom, J. N.; Nyarko, B. K.

    2014-12-01

    The integration of geographic information systems (GIS) and agent-based modelling (ABM) can be an efficient tool to improve spatial planning practices. This paper utilizes GIS and ABM approaches to simulate spatial growth patterns of settlement structures in Shama. A preliminary household survey on residential location decision-making choice served as the behavioural rule for household agents in the model. Physical environment properties of the model were extracted from a 2005 image implemented in NetLogo. The resulting growth pattern model was compared with empirical growth patterns to ascertain the model's accuracy. The paper establishes that the development of unplanned structures and its evolving structural pattern are a function of land price, proximity to economic centres, household economic status and location decision-making patterns. The application of the proposed model underlines its potential for integration into urban planning policies and practices, and for understanding residential decision-making processes in emerging cities in developing countries. Key Words: GIS; Agent-based modelling; Growth patterns; NetLogo; Location decision making; Computational Intelligence.

  12. Attention Modulates Visual-Tactile Interaction in Spatial Pattern Matching

    Science.gov (United States)

    Göschl, Florian; Engel, Andreas K.; Friese, Uwe

    2014-01-01

    Factors influencing crossmodal interactions are manifold and operate in a stimulus-driven, bottom-up fashion, as well as via top-down control. Here, we evaluate the interplay of stimulus congruence and attention in a visual-tactile task. To this end, we used a matching paradigm requiring the identification of spatial patterns that were concurrently presented visually on a computer screen and haptically to the fingertips by means of a Braille stimulator. Stimulation in our paradigm was always bimodal with only the allocation of attention being manipulated between conditions. In separate blocks of the experiment, participants were instructed to (a) focus on a single modality to detect a specific target pattern, (b) pay attention to both modalities to detect a specific target pattern, or (c) to explicitly evaluate if the patterns in both modalities were congruent or not. For visual as well as tactile targets, congruent stimulus pairs led to quicker and more accurate detection compared to incongruent stimulation. This congruence facilitation effect was more prominent under divided attention. Incongruent stimulation led to behavioral decrements under divided attention as compared to selectively attending a single sensory channel. Additionally, when participants were asked to evaluate congruence explicitly, congruent stimulation was associated with better performance than incongruent stimulation. Our results extend previous findings from audiovisual studies, showing that stimulus congruence also resulted in behavioral improvements in visuotactile pattern matching. The interplay of stimulus processing and attentional control seems to be organized in a highly flexible fashion, with the integration of signals depending on both bottom-up and top-down factors, rather than occurring in an ‘all-or-nothing’ manner. PMID:25203102

  13. Attention modulates visual-tactile interaction in spatial pattern matching.

    Directory of Open Access Journals (Sweden)

    Florian Göschl

    Full Text Available Factors influencing crossmodal interactions are manifold and operate in a stimulus-driven, bottom-up fashion, as well as via top-down control. Here, we evaluate the interplay of stimulus congruence and attention in a visual-tactile task. To this end, we used a matching paradigm requiring the identification of spatial patterns that were concurrently presented visually on a computer screen and haptically to the fingertips by means of a Braille stimulator. Stimulation in our paradigm was always bimodal with only the allocation of attention being manipulated between conditions. In separate blocks of the experiment, participants were instructed to (a focus on a single modality to detect a specific target pattern, (b pay attention to both modalities to detect a specific target pattern, or (c to explicitly evaluate if the patterns in both modalities were congruent or not. For visual as well as tactile targets, congruent stimulus pairs led to quicker and more accurate detection compared to incongruent stimulation. This congruence facilitation effect was more prominent under divided attention. Incongruent stimulation led to behavioral decrements under divided attention as compared to selectively attending a single sensory channel. Additionally, when participants were asked to evaluate congruence explicitly, congruent stimulation was associated with better performance than incongruent stimulation. Our results extend previous findings from audiovisual studies, showing that stimulus congruence also resulted in behavioral improvements in visuotactile pattern matching. The interplay of stimulus processing and attentional control seems to be organized in a highly flexible fashion, with the integration of signals depending on both bottom-up and top-down factors, rather than occurring in an 'all-or-nothing' manner.

  14. Ecological studies of Eastern Australian fruit flies (Diptera: Tephritidae) in their endemic habitat : II. The spatial pattern of abundance.

    Science.gov (United States)

    Zalucki, M P; Drew, R A I; Hooper, G H S

    1984-10-01

    11 fruit fly species captured at 47 sites in a natural forest area at Cooloola (south-east Queensland) revealed specific patterns of spatial abundance. Although all species were collected throughout the study area, D. bryoniae, D. mayi, D. neohumeralis and D. tryoni were more prevalent (average number caught per trap) in the open Eucalypt forest than the rainforest, whereas C. aequalis, D. absonifacies and D. endiandrae were more prevalent in the rainforest. D. cacuminatus, D. choristus, D. quadratus and D. signatifrons were equally prevalent throughout both forest types. Fly numbers were not distributed randomly throughout the trap sites. The clumped dispersion patterns seemed to be species specific as assessed and summarised by Taylor's Power Law. The exponent (b) relating mean spatial abundance to its variance ranged from 1.6-5.11 for the 11 species captured. Changing patterns of trap catches from one sampling period to another were analysed using correlograms for the 6 most abundant species (D. tryoni, D. neohumeralis, D. endiandrae, C. aequalis, D. cacuminatus and D. mayi). These revealed changing patterns of relative spatial abundance which can be related, in part, to changing population abundance levels. The various spatial patterns recognised are related to each species movement, breeding and feeding behaviour. It is proposed that flies migrate into the rainforest area from distant locations and that the rainforest habitat is an important adult feeding site.

  15. Spatial patterns in timing of the diurnal temperature cycle

    Directory of Open Access Journals (Sweden)

    T. R. H. Holmes

    2013-10-01

    Full Text Available This paper investigates the structural difference in timing of the diurnal temperature cycle (DTC over land resulting from choice of measuring device or model framework. It is shown that the timing can be reliably estimated from temporally sparse observations acquired from a constellation of low Earth-orbiting satellites given record lengths of at least three months. Based on a year of data, the spatial patterns of mean DTC timing are compared between temperature estimates from microwave Ka-band, geostationary thermal infrared (TIR, and numerical weather prediction model output from the Global Modeling and Assimilation Office (GMAO. It is found that the spatial patterns can be explained by vegetation effects, sensing depth differences and more speculatively the orientation of orographic relief features. In absolute terms, the GMAO model puts the peak of the DTC on average at 12:50 local solar time, 23 min before TIR with a peak temperature at 13:13 (both averaged over Africa and Europe. Since TIR is the shallowest observation of the land surface, this small difference represents a structural error that possibly affects the model's ability to assimilate observations that are closely tied to the DTC. The equivalent average timing for Ka-band is 13:44, which is influenced by the effect of increased sensing depth in desert areas. For non-desert areas, the Ka-band observations lag the TIR observations by only 15 min, which is in agreement with their respective theoretical sensing depth. The results of this comparison provide insights into the structural differences between temperature measurements and models, and can be used as a first step to account for these differences in a coherent way.

  16. Spatial Patterns in Distribution of Kimberlites: Relationship to Tectonic Processes and Lithosphere Structure

    DEFF Research Database (Denmark)

    Chemia, Zurab; Artemieva, Irina; Thybo, Hans

    2014-01-01

    of kimberlite melts through the lithospheric mantle, which forms the major pipe. Stage 2 (second-order process) begins when the major pipe splits into daughter sub-pipes (tree-like pattern) at crustal depths. We apply cluster analysis to the spatial distribution of all known kimberlite fields with the goal...

  17. Scale effects on spatially varying relationships between urban landscape patterns and water quality.

    Science.gov (United States)

    Sun, Yanwei; Guo, Qinghai; Liu, Jian; Wang, Run

    2014-08-01

    Scientific interpretation of the relationships between urban landscape patterns and water quality is important for sustainable urban planning and watershed environmental protection. This study applied the ordinary least squares regression model and the geographically weighted regression model to examine the spatially varying relationships between 12 explanatory variables (including three topographical factors, four land use parameters, and five landscape metrics) and 15 water quality indicators in watersheds of Yundang Lake, Maluan Bay, and Xinglin Bay with varying levels of urbanization in Xiamen City, China. A local and global investigation was carried out at the watershed-level, with 50 and 200 m riparian buffer scales. This study found that topographical features and landscape metrics are the dominant factors of water quality, while land uses are too weak to be considered as a strong influential factor on water quality. Such statistical results may be related with the characteristics of land use compositions in our study area. Water quality variations in the 50 m buffer were dominated by topographical variables. The impact of landscape metrics on water quality gradually strengthen with expanding buffer zones. The strongest relationships are obtained in entire watersheds, rather than in 50 and 200 m buffer zones. Spatially varying relationships and effective buffer zones were verified in this study. Spatially varying relationships between explanatory variables and water quality parameters are more diversified and complex in less urbanized areas than in highly urbanized areas. This study hypothesizes that all these varying relationships may be attributed to the heterogeneity of landscape patterns in different urban regions. Adjustment of landscape patterns in an entire watershed should be the key measure to successfully improving urban lake water quality.

  18. Comparative analysis on some spatial-domain filters for fringe pattern denoising.

    Science.gov (United States)

    Wang, Haixia; Kemao, Qian

    2011-04-20

    Fringe patterns produced by various optical interferometric techniques encode information such as shape, deformation, and refractive index. Noise affects further processing of the fringe patterns. Denoising is often needed before fringe pattern demodulation. Filtering along the fringe orientation is an effective option. Such filters include coherence enhancing diffusion, spin filtering with curve windows, second-order oriented partial-differential equations, and the regularized quadratic cost function for oriented fringe pattern filtering. These filters are analyzed to establish the relationships among them. Theoretical analysis shows that the four filters are largely equivalent to each other. Quantitative results are given on simulated fringe patterns to validate the theoretical analysis and to compare the performance of these filters. © 2011 Optical Society of America

  19. A Familiar Pattern? Semantic Memory Contributes to the Enhancement of Visuo-Spatial Memories

    Science.gov (United States)

    Riby, Leigh M.; Orme, Elizabeth

    2013-01-01

    In this study we quantify for the first time electrophysiological components associated with incorporating long-term semantic knowledge with visuo-spatial information using two variants of a traditional matrix patterns task. Results indicated that the matrix task with greater semantic content was associated with enhanced accuracy and RTs in a…

  20. The study for the Spatial Distribution Pattern of NDVI in the Western of Jilin Province

    Science.gov (United States)

    Yang, Shu-jie; Li, Xiao-dong; Yan, Shou-gang

    2018-02-01

    Using methods of spatial autocorrelation analysis and trend analysis, the paper studies the spatial distribution pattern of NDVI based on the GIMMS NDVI dataset (1998-2008), in Western Jilin. The maximum value for 15d is got through the method of MAX processing. Results show that: the NDVI in growing season shows a rising trend in western Jilin in 1998-2008. In the study area, the NDVI in Western Jilin shows positive spatial autocorrelation in the whole region, but the partial NDVI is apt to scattered distribution, which means the vegetation cover of Western Jilin is generally fragmental.

  1. Spatial Game Analytics and Visualization

    DEFF Research Database (Denmark)

    Drachen, Anders; Schubert, Matthias

    2013-01-01

    , techniques for spatial analysis had their share in these developments. However, the methods for analyzing and visualizing spatial and spatio-temporal patterns in player behavior being used by the game industry are not as diverse as the range of techniques utilized in game research, leaving room...... for a continuing development. This paper presents a review of current work on spatial and spatio-temporal game analytics across industry and research, describing and defining the key terminology, outlining current techniques and their application. We summarize the current problems and challenges in the field......The recently emerged field of game analytics and the development and adaptation of business intelligence techniques to support game design and development has given data-driven techniques a direct role in game development. Given that all digital games contain some sort of spatial operation...

  2. [Spatial analysis of mortality from cardiovascular diseases in Madrid City, Spain].

    Science.gov (United States)

    Gómez-Barroso, Diana; Prieto-Flores, María-Eugenia; Mellado San Gabino, Ana; Moreno Jiménez, Antonio

    2015-01-01

    Cardiovascular disease is the leading cause of death worldwide, but its spatial distribution is not homogeneous. The objective of this study is to analyze the spatial pattern of mortality from these diseases for men and women, in the populated urban area (AUP) of the municipality of Madrid, and to identify spatial aggregations. An ecological study was carried out by census tract, for men and women in 2010. Standardized Mortality Ratio (SMR), Relative Risk Smoothing (RRS) and Posterior Probability (PP) were calculated to consider the spatial pattern of the disease. To identify spatial clusters the Moran index (Moran I) and the Local Index of Spatial Autocorrelation (LISA) were used. The results were mapped. SMR higher than 1.1 was observed mainly in central areas among men and in peripheral areas among women. The PP that RRS was higher than 1 surpassed 0.8 in the center and in the periphery, in both men and women. Moran's I was 0.04 for men and 0.03 for women (p AUP. The LISA method showed similar patterns to those previously observed.

  3. Spatial and temporal patterns of carbon storage in forest ecosystems on Hainan island, southern China.

    Science.gov (United States)

    Ren, Hai; Li, Linjun; Liu, Qiang; Wang, Xu; Li, Yide; Hui, Dafeng; Jian, Shuguang; Wang, Jun; Yang, Huai; Lu, Hongfang; Zhou, Guoyi; Tang, Xuli; Zhang, Qianmei; Wang, Dong; Yuan, Lianlian; Chen, Xubing

    2014-01-01

    Spatial and temporal patterns of carbon (C) storage in forest ecosystems significantly affect the terrestrial C budget, but such patterns are unclear in the forests in Hainan Province, the largest tropical island in China. Here, we estimated the spatial and temporal patterns of C storage from 1993-2008 in Hainan's forest ecosystems by combining our measured data with four consecutive national forest inventories data. Forest coverage increased from 20.7% in the 1950s to 56.4% in the 2010s. The average C density of 163.7 Mg C/ha in Hainan's forest ecosystems in this study was slightly higher than that of China's mainland forests, but was remarkably lower than that in the tropical forests worldwide. Total forest ecosystem C storage in Hainan increased from 109.51 Tg in 1993 to 279.17 Tg in 2008. Soil C accounted for more than 70% of total forest ecosystem C. The spatial distribution of forest C storage in Hainan was uneven, reflecting differences in land use change and forest management. The potential carbon sequestration of forest ecosystems was 77.3 Tg C if all forested lands were restored to natural tropical forests. To increase the C sequestration potential on Hainan Island, future forest management should focus on the conservation of natural forests, selection of tree species, planting of understory species, and implementation of sustainable practices.

  4. Disturbance History,Spatial Variability, and Patterns of Biodiversity

    Science.gov (United States)

    Bendix, J.; Wiley, J. J.; Commons, M.

    2012-12-01

    The intermediate disturbance hypothesis predicts that species diversity will be maximized in environments experiencing intermediate intensity disturbance, after an intermediate timespan. Because many landscapes comprise mosaics with complex disturbance histories, the theory implies that each patch in those mosaics should have a distinct level of diversity reflecting combined impact of the magnitude of disturbance and the time since it occurred. We modeled the changing patterns of species richness across a landscape experiencing varied scenarios of simulated disturbance. Model outputs show that individual landscape patches have highly variable species richness through time, with the details reflecting the timing, intensity and sequence of their disturbance history. When the results are mapped across the landscape, the resulting temporal and spatial complexity illustrates both the contingent nature of diversity and the danger of generalizing about the impacts of disturbance.

  5. Defect Localization Capabilities of a Global Detection Scheme: Spatial Pattern Recognition Using Full-field Vibration Test Data in Plates

    Science.gov (United States)

    Saleeb, A. F.; Prabhu, M.; Arnold, S. M. (Technical Monitor)

    2002-01-01

    Recently, a conceptually simple approach, based on the notion of defect energy in material space has been developed and extensively studied (from the theoretical and computational standpoints). The present study focuses on its evaluation from the viewpoint of damage localization capabilities in case of two-dimensional plates; i.e., spatial pattern recognition on surfaces. To this end, two different experimental modal test results are utilized; i.e., (1) conventional modal testing using (white noise) excitation and accelerometer-type sensors and (2) pattern recognition using Electronic speckle pattern interferometry (ESPI), a full field method capable of analyzing the mechanical vibration of complex structures. Unlike the conventional modal testing technique (using contacting accelerometers), these emerging ESPI technologies operate in a non-contacting mode, can be used even under hazardous conditions with minimal or no presence of noise and can simultaneously provide measurements for both translations and rotations. Results obtained have clearly demonstrated the robustness and versatility of the global NDE scheme developed. The vectorial character of the indices used, which enabled the extraction of distinct patterns for localizing damages proved very useful. In the context of the targeted pattern recognition paradigm, two algorithms were developed for the interrogation of test measurements; i.e., intensity contour maps for the damaged index, and the associated defect energy vector field plots.

  6. Vibrations and spatial patterns in biomimetic surfaces: using the shark-skin effect to control blood clotting.

    Science.gov (United States)

    Ramachandran, Rahul; Maani, Nazanin; Rayz, Vitaliy L; Nosonovsky, Michael

    2016-08-06

    We study the effect of small-amplitude fast vibrations and small-amplitude spatial patterns on various systems involving wetting and liquid flow, such as superhydrophobic surfaces, membranes and flow pipes. First, we introduce a mathematical method of averaging the effect of small spatial and temporal patterns and substituting them with an effective force. Such an effective force can change the equilibrium state of a system as well as a phase state, leading to surface texture-induced and vibration-induced phase control. Vibration and patterns can effectively jam holes in vessels with liquid, separate multi-phase flow, change membrane properties, result in propulsion and locomotion and lead to many other multi-scale, nonlinear effects including the shark-skin effect. We discuss the application of such effects to blood flow for novel biomedical 'haemophobic' applications which can prevent blood clotting and thrombosis by controlling the surface pattern at a wall of a vessel (e.g. a catheter or stent).This article is part of the themed issue 'Bioinspired hierarchically structured surfaces for green science'. © 2016 The Author(s).

  7. Spatial self-organized patterning in seagrasses along a depth gradient of an intertidal ecosystem

    NARCIS (Netherlands)

    van der Heide, Tjisse; Bouma, Tjeerd J.; Nes, Egbert H. van; van de Koppel, Johan; Scheffer, Marten; Roelofs, Jan G.M.; Katwijk, Marieke M. van; Smolders, Alfons J.P.

    2010-01-01

    The spatial structure of seagrass landscapes is typically ascribed to the direct influence of physical factors such as hydrodynamics, light, and sediment transport. We studied regularly interspaced banded patterns, formed by elongated patches of seagrass, in a small-scale intertidal ecosystem. We

  8. Evaluating patterns of a white-band disease (WBD outbreak in Acropora palmata using spatial analysis: a comparison of transect and colony clustering.

    Directory of Open Access Journals (Sweden)

    Jennifer A Lentz

    Full Text Available BACKGROUND: Despite being one of the first documented, there is little known of the causative agent or environmental stressors that promote white-band disease (WBD, a major disease of Caribbean Acropora palmata. Likewise, there is little known about the spatiality of outbreaks. We examined the spatial patterns of WBD during a 2004 outbreak at Buck Island Reef National Monument in the US Virgin Islands. METHODOLOGY/PRINCIPAL FINDINGS: Ripley's K statistic was used to measure spatial dependence of WBD across scales. Localized clusters of WBD were identified using the DMAP spatial filtering technique. Statistics were calculated for colony- (number of A. palmata colonies with and without WBD within each transect and transect-level (presence/absence of WBD within transects data to evaluate differences in spatial patterns at each resolution of coral sampling. The Ripley's K plots suggest WBD does cluster within the study area, and approached statistical significance (p = 0.1 at spatial scales of 1100 m or less. Comparisons of DMAP results suggest the transect-level overestimated the prevalence and spatial extent of the outbreak. In contrast, more realistic prevalence estimates and spatial patterns were found by weighting each transect by the number of individual A. palmata colonies with and without WBD. CONCLUSIONS: As the search for causation continues, surveillance and proper documentation of the spatial patterns may inform etiology, and at the same time assist reef managers in allocating resources to tracking the disease. Our results indicate that the spatial scale of data collected can drastically affect the calculation of prevalence and spatial distribution of WBD outbreaks. Specifically, we illustrate that higher resolution sampling resulted in more realistic disease estimates. This should assist in selecting appropriate sampling designs for future outbreak investigations. The spatial techniques used here can be used to facilitate other

  9. Evaluating patterns of a white-band disease (WBD) outbreak in Acropora palmata using spatial analysis: a comparison of transect and colony clustering.

    Science.gov (United States)

    Lentz, Jennifer A; Blackburn, Jason K; Curtis, Andrew J

    2011-01-01

    Despite being one of the first documented, there is little known of the causative agent or environmental stressors that promote white-band disease (WBD), a major disease of Caribbean Acropora palmata. Likewise, there is little known about the spatiality of outbreaks. We examined the spatial patterns of WBD during a 2004 outbreak at Buck Island Reef National Monument in the US Virgin Islands. Ripley's K statistic was used to measure spatial dependence of WBD across scales. Localized clusters of WBD were identified using the DMAP spatial filtering technique. Statistics were calculated for colony- (number of A. palmata colonies with and without WBD within each transect) and transect-level (presence/absence of WBD within transects) data to evaluate differences in spatial patterns at each resolution of coral sampling. The Ripley's K plots suggest WBD does cluster within the study area, and approached statistical significance (p = 0.1) at spatial scales of 1100 m or less. Comparisons of DMAP results suggest the transect-level overestimated the prevalence and spatial extent of the outbreak. In contrast, more realistic prevalence estimates and spatial patterns were found by weighting each transect by the number of individual A. palmata colonies with and without WBD. As the search for causation continues, surveillance and proper documentation of the spatial patterns may inform etiology, and at the same time assist reef managers in allocating resources to tracking the disease. Our results indicate that the spatial scale of data collected can drastically affect the calculation of prevalence and spatial distribution of WBD outbreaks. Specifically, we illustrate that higher resolution sampling resulted in more realistic disease estimates. This should assist in selecting appropriate sampling designs for future outbreak investigations. The spatial techniques used here can be used to facilitate other coral disease studies, as well as, improve reef conservation and management.

  10. Remote sensing, geographical information systems, and spatial modeling for analyzing public transit services

    Science.gov (United States)

    Wu, Changshan

    Public transit service is a promising transportation mode because of its potential to address urban sustainability. Current ridership of public transit, however, is very low in most urban regions, particularly those in the United States. This woeful transit ridership can be attributed to many factors, among which poor service quality is key. Given this, there is a need for transit planning and analysis to improve service quality. Traditionally, spatially aggregate data are utilized in transit analysis and planning. Examples include data associated with the census, zip codes, states, etc. Few studies, however, address the influences of spatially aggregate data on transit planning results. In this research, previous studies in transit planning that use spatially aggregate data are reviewed. Next, problems associated with the utilization of aggregate data, the so-called modifiable areal unit problem (MAUP), are detailed and the need for fine resolution data to support public transit planning is argued. Fine resolution data is generated using intelligent interpolation techniques with the help of remote sensing imagery. In particular, impervious surface fraction, an important socio-economic indicator, is estimated through a fully constrained linear spectral mixture model using Landsat Enhanced Thematic Mapper Plus (ETM+) data within the metropolitan area of Columbus, Ohio in the United States. Four endmembers, low albedo, high albedo, vegetation, and soil are selected to model heterogeneous urban land cover. Impervious surface fraction is estimated by analyzing low and high albedo endmembers. With the derived impervious surface fraction, three spatial interpolation methods, spatial regression, dasymetric mapping, and cokriging, are developed to interpolate detailed population density. Results suggest that cokriging applied to impervious surface is a better alternative for estimating fine resolution population density. With the derived fine resolution data, a multiple

  11. [Dynamic evolution of landscape spatial pattern in Taihu Lake basin, China].

    Science.gov (United States)

    Wang, Fang; Xie, Xiao Ping; Chen, Zhi Cong

    2017-11-01

    Based on the land-use satellite image datasets of 2000, 2010 and 2015, the landscape index, dynamic change model, landscape transfer matrix and CLUE-S model were integrated to analyze the dynamic evolution of the landscape spatial pattern of Taihu Lake basin. The results showed that the landscape type of the basin was dominated by cultivated land and construction land, and the degree of landscape fragmentation was strengthened from 2000 to 2015, and the distribution showed a uniform trend. From the point of transfer dynamic change, the cultivated land and construction land changed significantly, which was reduced by 6761 km 2 (2.1%) and increased by 6615.33 km 2 (8.4%), respectively. From the landscape transfer, it could be seen that the main change direction of the cultivated land reduction was the construction land, and the cultivated land with 7866.30 km 2 was converted into construction land, accounting for 91.6% of the cultivated land change, and the contribution to the construction land was 96.5%. The trend of dynamic changes of cultivated and construction land in the counties and cities was the same as that of the whole Taihu Lake basin. For Shanghai Central Urban, as well as Pudong District, Lin'an City, Baoshan District, Minhang District, Jiading District and Changzhou City, the area of the cultivated land and construction land changed more prominently. However, compared with the CLUE-S model for the landscape pattern change in 2030, the change of cultivated and construction lands would be the largest in the natural development scenario. Under the ecological protection scenario, the area of grassland would increase and the dynamic degree would reach 54.5%. Under the situation of cultivated land protection, the conversion of cultivated land to construction land would be decreased.

  12. Soil water content evaluation considering time-invariant spatial pattern and space-variant temporal change

    Science.gov (United States)

    Hu, W.; Si, B. C.

    2013-10-01

    Soil water content (SWC) varies in space and time. The objective of this study was to evaluate soil water content distribution using a statistical model. The model divides spatial SWC series into time-invariant spatial patterns, space-invariant temporal changes, and space- and time-dependent redistribution terms. The redistribution term is responsible for the temporal changes in spatial patterns of SWC. An empirical orthogonal function was used to separate the total variations of redistribution terms into the sum of the product of spatial structures (EOFs) and temporally-varying coefficients (ECs). Model performance was evaluated using SWC data of near-surface (0-0.2 m) and root-zone (0-1.0 m) from a Canadian Prairie landscape. Three significant EOFs were identified for redistribution term for both soil layers. EOF1 dominated the variations of redistribution terms and it resulted in more changes (recharge or discharge) in SWC at wetter locations. Depth to CaCO3 layer and organic carbon were the two most important controlling factors of EOF1, and together, they explained over 80% of the variations in EOF1. Weak correlation existed between either EOF2 or EOF3 and the observed factors. A reasonable prediction of SWC distribution was obtained with this model using cross validation. The model performed better in the root zone than in the near surface, and it outperformed conventional EOF method in case soil moisture deviated from the average conditions.

  13. [Spatial-temporal pattern and obstacle factors of cultivated land ecological security in major grain producing areas of northeast China: a case study in Jilin Province].

    Science.gov (United States)

    Zhao, Hong-Bo; Ma, Yan-Ji

    2014-02-01

    According to the cultivated land ecological security in major grain production areas of Northeast China, this paper selected 48 counties of Jilin Province as the research object. Based on the PSR-EES conceptual framework model, an evaluation index system of cultivated land ecological security was built. By using the improved TOPSIS, Markov chains, GIS spatial analysis and obstacle degree models, the spatial-temporal pattern of cultivated land ecological security and the obstacle factors were analyzed from 1995 to 2011 in Jilin Province. The results indicated that, the composite index of cultivated land ecological security appeared in a rising trend in Jilin Province from 1995 to 2011, and the cultivated land ecological security level changed from being sensitive to being general. There was a pattern of 'Club Convergence' in cultivated land ecological security level in each county and the spatial discrepancy tended to become larger. The 'Polarization' trend of cultivated land ecological security level was obvious. The distributions of sensitive level and critical security level with ribbon patterns tended to be dispersed, the general security level and relative security levels concentrated, and the distributions of security level scattered. The unstable trend of cultivated land ecological security level was more and more obvious. The main obstacle factors that affected the cultivated land ecological security level in Jilin Province were rural net income per capita, economic density, the proportion of environmental protection investment in GDP, degree of machinery cultivation and the comprehensive utilization rate of industrial solid wastes.

  14. Patterns of coexistence of two species of freshwater turtles are affected by spatial scale

    DEFF Research Database (Denmark)

    Segurado, P.; Kunin, W.E.; Filipe, A.F.

    2012-01-01

    Inferring biotic interactions from the examination of patterns of species occurrences has been a central tenet in community ecology, and it has recently gained interest in the context of single-species distribution modelling. However, understanding of how spatial extent and grain size affect such...

  15. Novel measurement of spreading pattern of influenza epidemic by using weighted standard distance method: retrospective spatial statistical study of influenza, Japan, 1999-2009.

    Science.gov (United States)

    Shobugawa, Yugo; Wiafe, Seth A; Saito, Reiko; Suzuki, Tsubasa; Inaida, Shinako; Taniguchi, Kiyosu; Suzuki, Hiroshi

    2012-06-19

    Annual influenza epidemics occur worldwide resulting in considerable morbidity and mortality. Spreading pattern of influenza is not well understood because it is often hampered by the quality of surveillance data that limits the reliability of analysis. In Japan, influenza is reported on a weekly basis from 5,000 hospitals and clinics nationwide under the scheme of the National Infectious Disease Surveillance. The collected data are available to the public as weekly reports which were summarized into number of patient visits per hospital or clinic in each of the 47 prefectures. From this surveillance data, we analyzed the spatial spreading patterns of influenza epidemics using weekly weighted standard distance (WSD) from the 1999/2000 through 2008/2009 influenza seasons in Japan. WSD is a single numerical value representing the spatial compactness of influenza outbreak, which is small in case of clustered distribution and large in case of dispersed distribution. We demonstrated that the weekly WSD value or the measure of spatial compactness of the distribution of reported influenza cases, decreased to its lowest value before each epidemic peak in nine out of ten seasons analyzed. The duration between the lowest WSD week and the peak week of influenza cases ranged from minus one week to twenty weeks. The duration showed significant negative association with the proportion of influenza A/H3N2 cases in early phase of each outbreak (correlation coefficient was -0.75, P = 0.012) and significant positive association with the proportion of influenza B cases in the early phase (correlation coefficient was 0.64, P = 0.045), but positively correlated with the proportion of influenza A/H1N1 strain cases (statistically not significant). It is assumed that the lowest WSD values just before influenza peaks are due to local outbreak which results in small standard distance values. As influenza cases disperse nationwide and an epidemic reaches its peak, WSD value changed to be a

  16. Spatial Distribution Characteristics of Healthcare Facilities in Nanjing: Network Point Pattern Analysis and Correlation Analysis

    Directory of Open Access Journals (Sweden)

    Jianhua Ni

    2016-08-01

    Full Text Available The spatial distribution of urban service facilities is largely constrained by the road network. In this study, network point pattern analysis and correlation analysis were used to analyze the relationship between road network and healthcare facility distribution. The weighted network kernel density estimation method proposed in this study identifies significant differences between the outside and inside areas of the Ming city wall. The results of network K-function analysis show that private hospitals are more evenly distributed than public hospitals, and pharmacy stores tend to cluster around hospitals along the road network. After computing the correlation analysis between different categorized hospitals and street centrality, we find that the distribution of these hospitals correlates highly with the street centralities, and that the correlations are higher with private and small hospitals than with public and large hospitals. The comprehensive analysis results could help examine the reasonability of existing urban healthcare facility distribution and optimize the location of new healthcare facilities.

  17. Spatial patterns of water quality in Xingu River Basin (Amazonia prior to the Belo Monte dam impoundment

    Directory of Open Access Journals (Sweden)

    JL. Rodrigues-Filho

    Full Text Available Abstract The Xingu River, one of the most important of the Amazon Basin, is characterized by clear and transparent waters that drain a 509.685 km2 watershed with distinct hydrological and ecological conditions and anthropogenic pressures along its course. As in other basins of the Amazon system, studies in the Xingu are scarce. Furthermore, the eminent construction of the Belo Monte for hydropower production, which will alter the environmental conditions in the basin in its lower middle portion, denotes high importance of studies that generate relevant information that may subsidize a more balanced and equitable development in the Amazon region. Thus, the aim of this study was to analyze the water quality in the Xingu River and its tributaries focusing on spatial patterns by the use of multivariate statistical techniques, identifying which water quality parameters were more important for the environmental changes in the watershed. Data sampling were carried out during two complete hydrological cycles in twenty-five sampling stations. The data of twenty seven variables were analyzed by Spearman's correlation coefficients, cluster analysis (CA, and principal component analysis (PCA. The results showed a high auto-correlation between variables (> 0.7. These variables were removed from multivariate analyzes because they provided redundant information about the environment. The CA resulted in the formation of six clusters, which were clearly observed in the PCA and were characterized by different water quality. The statistical results allowed to identify a high spatial variation in the water quality, which were related to specific features of the environment, different uses, influences of anthropogenic activities and geochemical characteristics of the drained basins. It was also demonstrated that most of the sampling stations in the Xingu River basin showed good water quality, due to the absence of local impacts and high power of depuration of the

  18. Spatial patterns of water quality in Xingu River Basin (Amazonia) prior to the Belo Monte dam impoundment.

    Science.gov (United States)

    Rodrigues-Filho, J L; Abe, D S; Gatti-Junior, P; Medeiros, G R; Degani, R M; Blanco, F P; Faria, C R L; Campanelli, L; Soares, F S; Sidagis-Galli, C V; Teixeira-Silva, V; Tundisi, J E M; Matsmura-Tundisi, T; Tundisi, J G

    2015-08-01

    The Xingu River, one of the most important of the Amazon Basin, is characterized by clear and transparent waters that drain a 509.685 km2 watershed with distinct hydrological and ecological conditions and anthropogenic pressures along its course. As in other basins of the Amazon system, studies in the Xingu are scarce. Furthermore, the eminent construction of the Belo Monte for hydropower production, which will alter the environmental conditions in the basin in its lower middle portion, denotes high importance of studies that generate relevant information that may subsidize a more balanced and equitable development in the Amazon region. Thus, the aim of this study was to analyze the water quality in the Xingu River and its tributaries focusing on spatial patterns by the use of multivariate statistical techniques, identifying which water quality parameters were more important for the environmental changes in the watershed. Data sampling were carried out during two complete hydrological cycles in twenty-five sampling stations. The data of twenty seven variables were analyzed by Spearman's correlation coefficients, cluster analysis (CA), and principal component analysis (PCA). The results showed a high auto-correlation between variables (> 0.7). These variables were removed from multivariate analyzes because they provided redundant information about the environment. The CA resulted in the formation of six clusters, which were clearly observed in the PCA and were characterized by different water quality. The statistical results allowed to identify a high spatial variation in the water quality, which were related to specific features of the environment, different uses, influences of anthropogenic activities and geochemical characteristics of the drained basins. It was also demonstrated that most of the sampling stations in the Xingu River basin showed good water quality, due to the absence of local impacts and high power of depuration of the river itself.

  19. Spatial extent of analysis influences observed patterns of population genetic structure in a widespread darter species (Percidae)

    Science.gov (United States)

    Argentina, Jane E.; Angermeier, Paul L.; Hallerman, Eric M.; Welsh, Stuart A.

    2018-01-01

    Connectivity among stream fish populations allows for exchange of genetic material and helps maintain genetic diversity, adaptive potential and population stability over time. Changes in species demographics and population connectivity have the potential to permanently alter the genetic patterns of stream fish, although these changes through space and time are variable and understudied in small‐bodied freshwater fish.As a spatially widespread, common species of benthic freshwater fish, the variegate darter (Etheostoma variatum) is a model species for documenting how patterns of genetic structure and diversity respond to increasing isolation due to large dams and how scale of study may shape our understanding of these patterns. We sampled variegate darters from 34 sites across their range in the North American Ohio River basin and examined how patterns of genetic structure and diversity within and between populations responded to historical population changes and dams within and between populations.Spatial scale and configuration of genetic structure varied across the eight identified populations, from tributaries within a watershed, to a single watershed, to multiple watersheds that encompass Ohio River mainstem habitats. This multiwatershed pattern of population structuring suggests genetic dispersal across large distances was and may continue to be common, although some populations remain isolated despite no apparent structural dispersal barriers. Populations with low effective population sizes and evidence of past population bottlenecks showed low allelic richness, but diversity patterns were not related to watershed size, a surrogate for habitat availability. Pairwise genetic differentiation (FST) increased with fluvial distance and was related to both historic and contemporary processes. Genetic diversity changes were influenced by underlying population size and stability, and while instream barriers were not strong determinants of genetic structuring or

  20. Exploring spatial patterns of urban brownfields regeneration: The case of Brno, Czech Republic

    Czech Academy of Sciences Publication Activity Database

    Frantál, Bohumil; Greer-Wootten, B.; Klusáček, Petr; Krejčí, Tomáš; Kunc, Josef; Martinát, Stanislav

    2015-01-01

    Roč. 44, č. 1 (2015), s. 9-18 ISSN 0264-2751 R&D Projects: GA TA ČR(CZ) TD020259 Institutional support: RVO:68145535 Keywords : brownfields * urban renewal * spatial patterns Subject RIV: DE - Earth Magnetism, Geodesy, Geography Impact factor: 2.051, year: 2015 http://dx.doi.org/10.1016/j.cities.2014.12.007

  1. Complex temporal and spatial patterns in nonequilibrium systems: Progress report, December 1, 1987-November 30, 1988

    International Nuclear Information System (INIS)

    Swinney, H.L.

    1988-09-01

    Dynamical systems methods are being developed and used to characterize nonequilibrium processes and to address outstanding unresolved questions regarding bifurcations and chaos, especially in reaction-diffusion systems. An information-theoretic property, the mutual information, is being examined as a means for detecting and quantifying spatiotemporal chaos. A recent analysis has shown that information on dynamics deduced from noisy data can be used to reduce the noise in those data. These tools from dynamical systems and information theory are being applied to data obtained in laboratory experiments on homogeneous systems and on extended systems. A novel unstirred chemical reactor has been designed for studies of the development and evolution of chemical spatial patterns, and experiments with this reactor have yielded the first sustained chemical spatial patterns in a controlled laboratory environment. These laboratory experiments and numerical and analytic studies of models should provide general insights into spatiotemporal patterns in nonequilibrium systems. 14 refs

  2. Spatial distribution of human-caused forest fires in Galicia (NW Spain)

    Science.gov (United States)

    M. L. Chas-Amil; J. Touza; P. Prestemon

    2010-01-01

    It is crucial for fire prevention policies to assess the spatial patterns of human-started fires and their relationship with geographical and socioeconomic aspects. This study uses fire reports for the period 1988-2006 in Galicia, Spain, to analyze the spatial distribution of human-induced fire risk attending to causes and underlying motivations associated with fire...

  3. Retrospective 70 y-spatial analysis of repeated vine mortality patterns using ancient aerial time series, Pléiades images and multi-source spatial and field data

    Science.gov (United States)

    Vaudour, E.; Leclercq, L.; Gilliot, J. M.; Chaignon, B.

    2017-06-01

    For any wine estate, there is a need to demarcate homogeneous within-vineyard zones ('terroirs') so as to manage grape production, which depends on vine biological condition. Until now, the studies performing digital zoning of terroirs have relied on recent spatial data and scant attention has been paid to ancient geoinformation likely to retrace past biological condition of vines and especially occurrence of vine mortality. Is vine mortality characterized by recurrent and specific patterns and if so, are these patterns related to terroir units and/or past landuse? This study aimed at performing a historical and spatial tracing of vine mortality patterns using a long time-series of aerial survey images (1947-2010), in combination with recent data: soil apparent electrical conductivity EM38 measurements, very high resolution Pléiades satellite images, and a detailed field survey. Within a 6 ha-estate in the Southern Rhone Valley, landuse and planting history were retraced and the map of missing vines frequency was constructed from the whole time series including a 2015-Pléiades panchromatic band. Within-field terroir units were obtained from a support vector machine classifier computed on the spectral bands and NDVI of Pléiades images, EM38 data and morphometric data. Repeated spatial patterns of missing vines were highlighted throughout several plantings, uprootings, and vine replacements, and appeared to match some within-field terroir units, being explained by their specific soil characteristics, vine/soil management choices and the past landuse of the 1940s. Missing vines frequency was spatially correlated with topsoil CaCO3 content, and negatively correlated with topsoil iron, clay, total N, organic C contents and NDVI. A retrospective spatio-temporal assessment of terroir therefore brings a renewed focus on some key parameters for maintaining a sustainable grape production.

  4. Examining Spatiotemporal Urbanization Patterns in Kathmandu Valley, Nepal: Remote Sensing and Spatial Metrics Approaches

    Directory of Open Access Journals (Sweden)

    Rajesh Bahadur Thapa

    2009-09-01

    Full Text Available This paper examines the spatiotemporal pattern of urbanization in Kathmandu Valley using remote sensing and spatial metrics techniques. The study is based on 33-years of time series data compiled from satellite images. Along with new developments within the city fringes and rural villages in the valley, shifts in the natural environment and newly developed socioeconomic strains between residents are emerging. A highly dynamic spatial pattern of urbanization is observed in the valley. Urban built-up areas had a slow trend of growth in the 1960s and 1970s but have grown rapidly since the 1980s. The urbanization process has developed fragmented and heterogeneous land use combinations in the valley. However, the refill type of development process in the city core and immediate fringe areas has shown a decreasing trend in the neighborhood distances between land use patches, and an increasing trend towards physical connectedness, which indicates a higher probability of homogenous landscape development in the upcoming decades.

  5. Analyzing the Effects of Spatial Interaction among City Clusters on Urban Growth—Case of Wuhan Urban Agglomeration

    Directory of Open Access Journals (Sweden)

    Ronghui Tan

    2016-08-01

    Full Text Available For the past two decades, China’s urbanization has attracted increasing attention from scholars around the world. Numerous insightful studies have attempted to determine the socioeconomic causes of the rapid urban growth in Chinese cities. However, most of these studies regarded each city as a single entity, with few considering inter-city relationships. The present study uses a gravity-based model to measure the spatial interaction among city clusters in the Wuhan urban agglomeration (WUA, which is one of China’s most rapidly urbanizing regions. The effects of spatial interaction on urban growth area were also analyzed. Empirical results indicate that, similar to urban population or employment in secondary and tertiary industries in the WUA from 2000 to 2005, the spatial interaction among city clusters is one of the main drivers of urban growth. In fact, this study finds the effects of spatial interaction as the only socioeconomic factor that affected the spatial expansion from 2005 to 2010. This finding suggests that population migration and information and commodity flows showed greater influence than the socioeconomic drivers of each city did on promoting urbanization in the WUA during this period. We thus argue that spatial interaction among city clusters should be a consideration in future regional planning.

  6. Contrasting Spatial Patterns in Active-Fire and Fire-Suppressed Mediterranean Climate Old-Growth Mixed Conifer Forests

    OpenAIRE

    Fry, Danny L.; Stephens, Scott L.; Collins, Brandon M.; North, Malcolm P.; Franco-Vizcaíno, Ernesto; Gill, Samantha J.

    2014-01-01

    In Mediterranean environments in western North America, historic fire regimes in frequent-fire conifer forests are highly variable both temporally and spatially. This complexity influenced forest structure and spatial patterns, but some of this diversity has been lost due to anthropogenic disruption of ecosystem processes, including fire. Information from reference forest sites can help management efforts to restore forests conditions that may be more resilient to future changes in disturbanc...

  7. Spatial patterns of soil pH and the factors that influence them in plantation forests of northern China

    Science.gov (United States)

    Hong, Songbai; Liu, Yongwen; Piao, Shilong

    2017-04-01

    Climate and anthropogenic activities such as afforestation and nitrogen deposition all impact soil pH. Understanding the spatial pattern of soil pH and the factors that influence it can provide basic information for generating appropriate strategies for soil resource management and protection, especially in light of increasing anthropogenic influences and climate change. In this study, we investigated the spatial and vertical pattern of soil pH and evaluated the influence of climate and nitrogen deposition using 1647 soil profiles 1 meter in depth from 549 plots in plantation forests of northern China. We found that soil pH decreased from the southwest to the northeast in the study region and had a similar spatial pattern before and after afforestation. Furthermore, our results show that climate and nitrogen deposition fundamentally influence the pattern of soil pH. Specifically, increasing precipitation significantly decreased soil pH (with a mean rate of 0.3 for every 100 mm rainfall, ppH (0.13 for every degree centigrade, ppH (ppH directly and indirectly through climate-plant-soil interactions. As the risks from both climate change and nitrogen deposition increase, there is an urgent need to further understanding of soil pH dynamics and to develop informed policies to protect soil resources.

  8. Computer simulation on spatial resolution of X-ray bright-field imaging by dynamical diffraction theory for a Laue-case crystal analyzer

    International Nuclear Information System (INIS)

    Suzuki, Yoshifumi; Chikaura, Yoshinori; Ando, Masami

    2011-01-01

    Recently, dark-field imaging (DFI) and bright-field imaging (BFI) have been proposed and applied to visualize X-ray refraction effects yielded in biomedical objects. In order to clarify the spatial resolution due to a crystal analyzer in Laue geometry, a program based on the Takagi-Taupin equation was modified to be used for carrying out simulations to evaluate the spatial resolution of images coming into a Laue angular analyzer (LAA). The calculation was done with a perfect plane wave for diffraction wave-fields, which corresponded to BFI, under the conditions of 35 keV and a diffraction index 440 for a 2100 μm thick LAA. As a result, the spatial resolution along the g-vector direction showed approximately 37.5 μm. 126 μm-thick LAA showed a spatial resolution better than 3.1 μm under the conditions of 13.7 keV and a diffraction index 220.

  9. Spatial patterns in the distribution of kimberlites: relationship to tectonic processes and lithosphere structure

    DEFF Research Database (Denmark)

    Chemia, Zurab; Artemieva, Irina; Thybo, Hans

    2015-01-01

    of kimberlite melts through the lithospheric mantle, which forms the major pipe. Stage 2 (second-order process) begins when the major pipe splits into daughter sub-pipes (tree-like pattern) at crustal depths. We apply cluster analysis to the spatial distribution of all known kimberlite fields with the goal...

  10. Spatial pattern and variations in the prevalence of congenital heart disease in children aged 4-18 years in the Qinghai-Tibetan Plateau.

    Science.gov (United States)

    Ma, Li-Guang; Chen, Qiu-Hong; Wang, Yuan-Yuan; Wang, Jing; Ren, Zhou-Peng; Cao, Zong-Fu; Cao, Yan-Rong; Ma, Xu; Wang, Bin-Bin

    2018-06-15

    This study aimed to investigate the spatial distribution pattern of the prevalence of congenital heart disease (CHD) in children in Qinghai-Tibetan Plateau (QTP), a high-altitude region in China. Epidemiological data from a survey on the prevalence of CHD in Qinghai Province including 288,066 children (4-18 years) were used in this study. The prevalence and distribution pattern of CHD was determined by sex, CHD subtype, and nationality and altitude. Spatial pattern analysis using Getis-Ord Gi ⁎ was used to identify the spatial distribution of CHD. Bayesian spatial binomial regression was performed to examine the relationship between the prevalence of CHD and environmental risk factors in the QTP. The prevalence of CHD showed a significant spatial clustering pattern. The Tibetan autonomous prefecture of Yushu (average altitude > 4000 m) and the Mongolian autonomous county of Henan (average altitude > 3600 m) in Huangnan had the highest prevalence of CHD. Univariate analysis showed that with ascending altitude, the total prevalence of CHD, that in girls and boys with CHD, and that of the subtypes PDA and ASD increasing accordingly. Thus, environmental factors greatly contributed to the prevalence of CHD. The prevalence of CHD shows significant spatial clustering pattern in the QTP. The CHD subtype prevalence clustering pattern has statistical regularity which would provide convenient clues of environmental risk factors. Our results may provide support to make strategies of CHD prevention, to reduce the incidence of CHD in high altitude regions of China. Copyright © 2018. Published by Elsevier B.V.

  11. Solution strategies as possible explanations of individual and sex differences in a dynamic spatial task.

    Science.gov (United States)

    Peña, Daniel; Contreras, María José; Shih, Pei Chun; Santacreu, José

    2008-05-01

    When individuals perform spatial tasks, individual differences emerge in accuracy and speed as well as in the response patterns used to cope with the task. The purpose of this study is to identify, through empirical criteria, the different response patterns or strategies used by individuals when performing the dynamic spatial task presented in the Spatial Orientation Dynamic Test-Revised (SODT-R). Results show that participants can be classified according to their response patterns. Three different ways of solving a task are described, and their relation to (a) performance factors (response latency, response frequency, and invested time) and (b) ability tests (analytical reasoning, verbal reasoning, and spatial estimation) are investigated. Sex differences in response patterns and performance are also analyzed. It is found that the frequency with which men and women employ each one of the strategies described here, is different and statistically significant. Thus, employed strategy plays an important role when interpreting sex differences on dynamic spatial tasks.

  12. Detecting spatial patterns with the cumulant function – Part 1: The theory

    Directory of Open Access Journals (Sweden)

    P. Naveau

    2008-02-01

    Full Text Available In climate studies, detecting spatial patterns that largely deviate from the sample mean still remains a statistical challenge. Although a Principal Component Analysis (PCA, or equivalently a Empirical Orthogonal Functions (EOF decomposition, is often applied for this purpose, it provides meaningful results only if the underlying multivariate distribution is Gaussian. Indeed, PCA is based on optimizing second order moments, and the covariance matrix captures the full dependence structure of multivariate Gaussian vectors. Whenever the application at hand can not satisfy this normality hypothesis (e.g. precipitation data, alternatives and/or improvements to PCA have to be developed and studied. To go beyond this second order statistics constraint, that limits the applicability of the PCA, we take advantage of the cumulant function that can produce higher order moments information. The cumulant function, well-known in the statistical literature, allows us to propose a new, simple and fast procedure to identify spatial patterns for non-Gaussian data. Our algorithm consists in maximizing the cumulant function. Three families of multivariate random vectors, for which explicit computations are obtained, are implemented to illustrate our approach. In addition, we show that our algorithm corresponds to selecting the directions along which projected data display the largest spread over the marginal probability density tails.

  13. Urban sprawl and fragmentation in Latin America: a dynamic quantification and characterization of spatial patterns.

    Science.gov (United States)

    Inostroza, Luis; Baur, Rolf; Csaplovics, Elmar

    2013-01-30

    South America is one of the most urbanized continents in the world, where almost 84% of the total population lives in cities, more urbanized than North America (82%) and Europe (73%). Spatial dynamics, their structure, main features, land consumption rates, spatial arrangement, fragmentation degrees and comparability, remain mostly unknown for most Latin American cities. Using satellite imagery the main parameters of sprawl are quantified for 10 Latin American cities over a period of 20 years by monitoring growth patterns and identifying spatial metrics to characterize urban development and sprawling features measured with GIS tools. This quantification contributes to a better understanding of urban form in Latin America. A pervasive spatial expansion has been observed, where most of the studied cities are expanding at fast rates with falling densities trend. Although important differences in the rates of land consumption and densities exist, there is an underlying fragmentation trend towards increasing sprawl. These trends of spatial discontinuity may eventually be intensified by further economic development. Urban Sprawl/Latin America/GIS metrics/spatial development. Copyright © 2012 Elsevier Ltd. All rights reserved.

  14. Postural tasks are associated with center of pressure spatial patterns of three-dimensional statokinesigrams in young and elderly healthy subjects.

    Science.gov (United States)

    Baracat, Patrícia Junqueira Ferraz; de Sá Ferreira, Arthur

    2013-12-01

    The present study investigated the association between postural tasks and center of pressure spatial patterns of three-dimensional statokinesigrams. Young (n=35; 27.0±7.7years) and elderly (n=38; 67.3±8.7years) healthy volunteers maintained an undisturbed standing position during postural tasks characterized by combined sensory (vision/no vision) and biomechanical challenges (feet apart/together). A method for the analysis of three-dimensional statokinesigrams based on nonparametric statistics and image-processing analysis was employed. Four patterns of spatial distribution were derived from ankle and hip strategies according to the quantity (single; double; multi) and location (anteroposterior; mediolateral) of high-density regions on three-dimensional statokinesigrams. Significant associations between postural task and spatial pattern were observed (young: gamma=0.548, p<.001; elderly: gamma=0.582, p<.001). Robustness analysis revealed small changes related to parameter choices for histogram processing. MANOVA revealed multivariate main effects for postural task [Wilks' Lambda=0.245, p<.001] and age [Wilks' Lambda=0.308, p<.001], with interaction [Wilks' Lambda=0.732, p<.001]. The quantity of high-density regions was positively correlated to stabilogram and statokinesigram variables (p<.05 or lower). In conclusion, postural tasks are associated with center of pressure spatial patterns and are similar in young and elderly healthy volunteers. Single-centered patterns reflected more stable postural conditions and were more frequent with complete visual input and a wide base of support. Copyright © 2013 Elsevier B.V. All rights reserved.

  15. Effect of growth parameters on spatial pattern formation of cadmium hydroxide in agar gel

    International Nuclear Information System (INIS)

    Palaniandavar, N.; Gnanam, F.D.; Ramasamy, P.

    1986-01-01

    The interrelated effects of growth parameters on spatial pattern formation of cadmium hydroxide in agar gel medium have been investigated. The main parameters are concentration of electrolytes, pH of the medium, density of the gel, the concentration of parasitic electrolyte and the concentration of additives. The pattern formation is explained on the basis of electrical double layer theory coupled with diffusion. Using Shinohara's revised coagulation concept, the flocculation value is calculated. With suitable combinations of parameter values, dendritic growth and spherulitic growth of cadmium hydroxide crystals have been observed. (author)

  16. Impact of Spatial Pumping Patterns on Groundwater Management

    Science.gov (United States)

    Yin, J.; Tsai, F. T. C.

    2017-12-01

    Challenges exist to manage groundwater resources while maintaining a balance between groundwater quantity and quality because of anthropogenic pumping activities as well as complex subsurface environment. In this study, to address the impact of spatial pumping pattern on groundwater management, a mixed integer nonlinear multi-objective model is formulated by integrating three objectives within a management framework to: (i) maximize total groundwater withdrawal from potential wells; (ii) minimize total electricity cost for well pumps; and (iii) attain groundwater level at selected monitoring locations as close as possible to the target level. Binary variables are used in the groundwater management model to control the operative status of pumping wells. The NSGA-II is linked with MODFLOW to solve the multi-objective problem. The proposed method is applied to a groundwater management problem in the complex Baton Rouge aquifer system, southeastern Louisiana. Results show that (a) non-dominated trade-off solutions under various spatial distributions of active pumping wells can be achieved. Each solution is optimal with regard to its corresponding objectives; (b) operative status, locations and pumping rates of pumping wells are significant to influence the distribution of hydraulic head, which in turn influence the optimization results; (c) A wide range of optimal solutions is obtained such that decision makers can select the most appropriate solution through negotiation with different stakeholders. This technique is beneficial to finding out the optimal extent to which three objectives including water supply concern, energy concern and subsidence concern can be balanced.

  17. The effect of road network patterns on pedestrian safety: A zone-based Bayesian spatial modeling approach.

    Science.gov (United States)

    Guo, Qiang; Xu, Pengpeng; Pei, Xin; Wong, S C; Yao, Danya

    2017-02-01

    Pedestrian safety is increasingly recognized as a major public health concern. Extensive safety studies have been conducted to examine the influence of multiple variables on the occurrence of pedestrian-vehicle crashes. However, the explicit relationship between pedestrian safety and road network characteristics remains unknown. This study particularly focused on the role of different road network patterns on the occurrence of crashes involving pedestrians. A global integration index via space syntax was introduced to quantify the topological structures of road networks. The Bayesian Poisson-lognormal (PLN) models with conditional autoregressive (CAR) prior were then developed via three different proximity structures: contiguity, geometry-centroid distance, and road network connectivity. The models were also compared with the PLN counterpart without spatial correlation effects. The analysis was based on a comprehensive crash dataset from 131 selected traffic analysis zones in Hong Kong. The results indicated that higher global integration was associated with more pedestrian-vehicle crashes; the irregular pattern network was proved to be safest in terms of pedestrian crash occurrences, whereas the grid pattern was the least safe; the CAR model with a neighborhood structure based on road network connectivity was found to outperform in model goodness-of-fit, implying the importance of accurately accounting for spatial correlation when modeling spatially aggregated crash data. Copyright © 2016 Elsevier Ltd. All rights reserved.

  18. Spatial pattern characteristics of water footprint for maize production in Northeast China.

    Science.gov (United States)

    Duan, Peili; Qin, Lijie; Wang, Yeqiao; He, Hongshi

    2016-01-30

    Water footprint (WF) methodology is essential for quantifying total water consumption of crop production and making efficient water management policies. This study calculated the green, blue, grey and total WFs of maize production in Northeast China from 1998 to 2012 and compared the values of the provinces. This study also analyzed the spatial variation and structure characteristics of the WFs at the prefecture level. The annual average WF of maize production was 1029 m(3) per ton, which was 51% green, 21% blue and 28% grey. The WF of maize production was highest in Liaoning Province, moderate in Heilongjiang Province and lowest in Jilin Province. The spatial differences of the WFs calculated for the 36 major maize production prefectures were significant in Northeast China. There was a moderate positive spatial autocorrelation among prefectures that had similar WFs. Local indicator of spatial autocorrelation index (LISA) analysis identified prefectures with higher WFs in the southeast region of Liaoning Province and the southwest region of Heilongjiang Province and prefectures with lower WFs in the middle of Jilin Province. Spatial differences in the WF of maize production were caused mainly by variations in climate conditions, soil quality, irrigation facilities and maize yield. The spatial distribution of WFs can help provide a scientific basis for optimizing maize production distribution and then formulate strategies to reduce the WF of maize production. © 2015 Society of Chemical Industry.

  19. Evaluating spatial patterns in hydrological modelling

    DEFF Research Database (Denmark)

    Koch, Julian

    the contiguous United Sates (10^6 km2). To this end, the thesis at hand applies a set of spatial performance metrics on various hydrological variables, namely land-surface-temperature (LST), evapotranspiration (ET) and soil moisture. The inspiration for the applied metrics is found in related fields...... is not fully exploited by current modelling frameworks due to the lack of suitable spatial performance metrics. Furthermore, the traditional model evaluation using discharge is found unsuitable to lay confidence on the predicted catchment inherent spatial variability of hydrological processes in a fully...

  20. Sketch-Based Spatial Queries for the Retrieval of Human Locomotion Patterns in Smart Environments

    Directory of Open Access Journals (Sweden)

    Gamhewage C. de Silva

    2009-01-01

    Full Text Available A system for retrieving video sequences created by tracking humans in a smart environment, by using spatial queries, is presented. Sketches made with a pointing device on the floor layout of the environment are used to form queries corresponding to locomotion patterns. The sketches are analyzed to identify the type of the query. Directional search algorithms based on the minimum distance between points are applied for finding the best matches to the sketch. The results are ranked according to the similarity and presented to the user. The system was developed in two stages. An initial version of the system was implemented and evaluated by conducting a user study. Modifications were made where appropriate, according to the results and the feedback, to make the system more accurate and usable. We present the details of the initial system, the user study and the results, and the modifications thus made. The overall accuracy of retrieval for the initial system was approximately 93%, when tested on a collection of data from a real-life experiment. This is improved to approximately 97% after the modifications. The user interaction strategy and the search algorithms are usable in any environment for automated retrieval of locomotion patterns. The subjects who evaluated the system found it easy to learn and use. Their comments included several prospective applications for the user interaction strategy, providing valuable insight for future directions.

  1. Topological patterns in street networks of self-organized urban settlements

    Science.gov (United States)

    Buhl, J.; Gautrais, J.; Reeves, N.; Solé, R. V.; Valverde, S.; Kuntz, P.; Theraulaz, G.

    2006-02-01

    Many urban settlements result from a spatially distributed, decentralized building process. Here we analyze the topological patterns of organization of a large collection of such settlements using the approach of complex networks. The global efficiency (based on the inverse of shortest-path lengths), robustness to disconnections and cost (in terms of length) of these graphs is studied and their possible origins analyzed. A wide range of patterns is found, from tree-like settlements (highly vulnerable to random failures) to meshed urban patterns. The latter are shown to be more robust and efficient.

  2. Contrasting spatial patterns in active-fire and fire-suppressed Mediterranean climate old-growth mixed conifer forests.

    Science.gov (United States)

    Fry, Danny L; Stephens, Scott L; Collins, Brandon M; North, Malcolm P; Franco-Vizcaíno, Ernesto; Gill, Samantha J

    2014-01-01

    In Mediterranean environments in western North America, historic fire regimes in frequent-fire conifer forests are highly variable both temporally and spatially. This complexity influenced forest structure and spatial patterns, but some of this diversity has been lost due to anthropogenic disruption of ecosystem processes, including fire. Information from reference forest sites can help management efforts to restore forests conditions that may be more resilient to future changes in disturbance regimes and climate. In this study, we characterize tree spatial patterns using four-ha stem maps from four old-growth, Jeffrey pine-mixed conifer forests, two with active-fire regimes in northwestern Mexico and two that experienced fire exclusion in the southern Sierra Nevada. Most of the trees were in patches, averaging six to 11 trees per patch at 0.007 to 0.014 ha(-1), and occupied 27-46% of the study areas. Average canopy gap sizes (0.04 ha) covering 11-20% of the area were not significantly different among sites. The putative main effects of fire exclusion were higher densities of single trees in smaller size classes, larger proportion of trees (≥ 56%) in large patches (≥ 10 trees), and decreases in spatial complexity. While a homogenization of forest structure has been a typical result from fire exclusion, some similarities in patch, single tree, and gap attributes were maintained at these sites. These within-stand descriptions provide spatially relevant benchmarks from which to manage for structural heterogeneity in frequent-fire forest types.

  3. [Spatial regimes: dynamics of intentional homicides in the city of São Paulo between 2000 and 2008].

    Science.gov (United States)

    Nery, Marcelo Batista; Peres, Maria Fernanda Tourinho; Cardia, Nancy; Vicentin, Diego; Adorno, Sérgio

    2012-12-01

    To identify the existence of spatial and temporal patterns in the occurrence of intentional homicides in the municipality of São Paulo (MSP), Brazil, and to discuss the analytical value of taking such patterns into account when designing studies that address the dynamics and factors associated with the incidence of homicides. A longitudinal ecological study was conducted, having as units of analysis 13 205 census tracts and the 96 census districts that congregate these sectors in São Paulo. All intentional homicides reported in the city between 2000 and 2008 were analyzed. The gross homicide rates per 100 000 population was calculated as well as the global and local Bayesian estimates for each census tract during the study period. To verify the possibility of identifying different patterns of the spatial distribution of homicides, we used BoxMap and Moran's I index. The homicide trends in the city of São Paulo in the last decade were not homogeneous and systematic. Instead, seven patterns of spatial distribution were identified; that is, seven spatial regimes for the occurrence of intentional homicides, considering the homicide rates within each census tract as well as the rates in adjacent tracts. These spatial distribution regimes were not contained within the limits of the census tracts and districts. The results show the importance of analyzing the spatial distribution of social phenomena without restriction of political and administrative boundaries.

  4. Novel measurement of spreading pattern of influenza epidemic by using weighted standard distance method: retrospective spatial statistical study of influenza, Japan, 1999–2009

    Directory of Open Access Journals (Sweden)

    Shobugawa Yugo

    2012-06-01

    Full Text Available Abstract Background Annual influenza epidemics occur worldwide resulting in considerable morbidity and mortality. Spreading pattern of influenza is not well understood because it is often hampered by the quality of surveillance data that limits the reliability of analysis. In Japan, influenza is reported on a weekly basis from 5,000 hospitals and clinics nationwide under the scheme of the National Infectious Disease Surveillance. The collected data are available to the public as weekly reports which were summarized into number of patient visits per hospital or clinic in each of the 47 prefectures. From this surveillance data, we analyzed the spatial spreading patterns of influenza epidemics using weekly weighted standard distance (WSD from the 1999/2000 through 2008/2009 influenza seasons in Japan. WSD is a single numerical value representing the spatial compactness of influenza outbreak, which is small in case of clustered distribution and large in case of dispersed distribution. Results We demonstrated that the weekly WSD value or the measure of spatial compactness of the distribution of reported influenza cases, decreased to its lowest value before each epidemic peak in nine out of ten seasons analyzed. The duration between the lowest WSD week and the peak week of influenza cases ranged from minus one week to twenty weeks. The duration showed significant negative association with the proportion of influenza A/H3N2 cases in early phase of each outbreak (correlation coefficient was −0.75, P = 0.012 and significant positive association with the proportion of influenza B cases in the early phase (correlation coefficient was 0.64, P = 0.045, but positively correlated with the proportion of influenza A/H1N1 strain cases (statistically not significant. It is assumed that the lowest WSD values just before influenza peaks are due to local outbreak which results in small standard distance values. As influenza cases disperse nationwide and an

  5. Novel measurement of spreading pattern of influenza epidemic by using weighted standard distance method: retrospective spatial statistical study of influenza, Japan, 1999–2009

    Science.gov (United States)

    2012-01-01

    Background Annual influenza epidemics occur worldwide resulting in considerable morbidity and mortality. Spreading pattern of influenza is not well understood because it is often hampered by the quality of surveillance data that limits the reliability of analysis. In Japan, influenza is reported on a weekly basis from 5,000 hospitals and clinics nationwide under the scheme of the National Infectious Disease Surveillance. The collected data are available to the public as weekly reports which were summarized into number of patient visits per hospital or clinic in each of the 47 prefectures. From this surveillance data, we analyzed the spatial spreading patterns of influenza epidemics using weekly weighted standard distance (WSD) from the 1999/2000 through 2008/2009 influenza seasons in Japan. WSD is a single numerical value representing the spatial compactness of influenza outbreak, which is small in case of clustered distribution and large in case of dispersed distribution. Results We demonstrated that the weekly WSD value or the measure of spatial compactness of the distribution of reported influenza cases, decreased to its lowest value before each epidemic peak in nine out of ten seasons analyzed. The duration between the lowest WSD week and the peak week of influenza cases ranged from minus one week to twenty weeks. The duration showed significant negative association with the proportion of influenza A/H3N2 cases in early phase of each outbreak (correlation coefficient was −0.75, P = 0.012) and significant positive association with the proportion of influenza B cases in the early phase (correlation coefficient was 0.64, P = 0.045), but positively correlated with the proportion of influenza A/H1N1 strain cases (statistically not significant). It is assumed that the lowest WSD values just before influenza peaks are due to local outbreak which results in small standard distance values. As influenza cases disperse nationwide and an epidemic reaches its peak

  6. VPA: an R tool for analyzing sequencing variants with user-specified frequency pattern

    Directory of Open Access Journals (Sweden)

    Hu Qiang

    2012-01-01

    Full Text Available Abstract Background The massive amounts of genetic variant generated by the next generation sequencing systems demand the development of effective computational tools for variant prioritization. Findings VPA (Variant Pattern Analyzer is an R tool for prioritizing variants with specified frequency pattern from multiple study subjects in next-generation sequencing study. The tool starts from individual files of variant and sequence calls and extract variants with user-specified frequency pattern across the study subjects of interest. Several position level quality criteria can be incorporated into the variant extraction. It can be used in studies with matched pair design as well as studies with multiple groups of subjects. Conclusions VPA can be used as an automatic pipeline to prioritize variants for further functional exploration and hypothesis generation. The package is implemented in the R language and is freely available from http://vpa.r-forge.r-project.org.

  7. Multiagent-Based Simulation of Temporal-Spatial Characteristics of Activity-Travel Patterns Using Interactive Reinforcement Learning

    Directory of Open Access Journals (Sweden)

    Min Yang

    2014-01-01

    Full Text Available We propose a multiagent-based reinforcement learning algorithm, in which the interactions between travelers and the environment are considered to simulate temporal-spatial characteristics of activity-travel patterns in a city. Road congestion degree is added to the reinforcement learning algorithm as a medium that passes the influence of one traveler’s decision to others. Meanwhile, the agents used in the algorithm are initialized from typical activity patterns extracted from the travel survey diary data of Shangyu city in China. In the simulation, both macroscopic activity-travel characteristics such as traffic flow spatial-temporal distribution and microscopic characteristics such as activity-travel schedules of each agent are obtained. Comparing the simulation results with the survey data, we find that deviation of the peak-hour traffic flow is less than 5%, while the correlation of the simulated versus survey location choice distribution is over 0.9.

  8. Considerations of scale in the analysis of spatial pattern of plant disease epidemics.

    Science.gov (United States)

    Turechek, William W; McRoberts, Neil

    2013-01-01

    Scale is an important but somewhat neglected subject in plant pathology. Scale serves as an abstract concept, providing a framework for organizing observations and theoretical models, and plays a functional role in the organization of ecological communities and physical processes. Rich methodological resources are available to plant pathologists interested in considering either or both aspects of scale in their research. We summarize important concepts in both areas of the literature, particularly as they apply to the spatial pattern of plant disease, and highlight some new results that emphasize the importance of scaling on the emergence of different types of probability distribution in empirical observation. We also highlight the important links between heterogeneity and scale, which are of central importance in plant disease epidemiology and the analysis of spatial pattern. We consider statistical approaches that are available, where actual physical scale is known, and for more conceptual research on hierarchies, where scale plays a more abstract role, particularly for field-based research. For the latter, we highlight methods that plant pathologists could consider to account for the effect of scale in the design of field studies.

  9. Determinants of Spatial Distribution in a Bee Community: Nesting Resources, Flower Resources, and Body Size

    Science.gov (United States)

    Torné-Noguera, Anna; Rodrigo, Anselm; Arnan, Xavier; Osorio, Sergio; Barril-Graells, Helena; da Rocha-Filho, Léo Correia; Bosch, Jordi

    2014-01-01

    Understanding biodiversity distribution is a primary goal of community ecology. At a landscape scale, bee communities are affected by habitat composition, anthropogenic land use, and fragmentation. However, little information is available on local-scale spatial distribution of bee communities within habitats that are uniform at the landscape scale. We studied a bee community along with floral and nesting resources over a 32 km2 area of uninterrupted Mediterranean scrubland. Our objectives were (i) to analyze floral and nesting resource composition at the habitat scale. We ask whether these resources follow a geographical pattern across the scrubland at bee-foraging relevant distances; (ii) to analyze the distribution of bee composition across the scrubland. Bees being highly mobile organisms, we ask whether bee composition shows a homogeneous distribution or else varies spatially. If so, we ask whether this variation is irregular or follows a geographical pattern and whether bees respond primarily to flower or to nesting resources; and (iii) to establish whether body size influences the response to local resource availability and ultimately spatial distribution. We obtained 6580 specimens belonging to 98 species. Despite bee mobility and the absence of environmental barriers, our bee community shows a clear geographical pattern. This pattern is mostly attributable to heterogeneous distribution of small (nesting substrates. Even then, a large proportion (54.8%) of spatial variability remains unexplained by flower or nesting resources. We conclude that bee communities are strongly conditioned by local effects and may exhibit spatial heterogeneity patterns at a scale as low as 500–1000 m in patches of homogeneous habitat. These results have important implications for local pollination dynamics and spatial variation of plant-pollinator networks. PMID:24824445

  10. REMOTE SENSING-BASED DETECTION AND SPATIAL PATTERN ANALYSIS FOR GEO-ECOLOGICAL NICHE MODELING OF TILLANDSIA SPP. IN THE ATACAMA, CHILE

    Directory of Open Access Journals (Sweden)

    N. Wolf

    2016-06-01

    Full Text Available In the coastal Atacama Desert in Northern Chile plant growth is constrained to so-called ‘fog oases’ dominated by monospecific stands of the genus Tillandsia. Adapted to the hyperarid environmental conditions, these plants specialize on the foliar uptake of fog as main water and nutrient source. It is this characteristic that leads to distinctive macro- and micro-scale distribution patterns, reflecting complex geo-ecological gradients, mainly affected by the spatiotemporal occurrence of coastal fog respectively the South Pacific Stratocumulus clouds reaching inlands. The current work employs remote sensing, machine learning and spatial pattern/GIS analysis techniques to acquire detailed information on the presence and state of Tillandsia spp. in the Tarapacá region as a base to better understand the bioclimatic and topographic constraints determining the distribution patterns of Tillandsia spp. Spatial and spectral predictors extracted from WorldView-3 satellite data are used to map present Tillandsia vegetation in the Tarapaca region. Regression models on Vegetation Cover Fraction (VCF are generated combining satellite-based as well as topographic variables and using aggregated high spatial resolution information on vegetation cover derived from UAV flight campaigns as a reference. The results are a first step towards mapping and modelling the topographic as well as bioclimatic factors explaining the spatial distribution patterns of Tillandsia fog oases in the Atacama, Chile.

  11. Remote Sensing-Based Detection and Spatial Pattern Analysis for Geo-Ecological Niche Modeling of Tillandsia SPP. In the Atacama, Chile

    Science.gov (United States)

    Wolf, N.; Siegmund, A.; del Río, C.; Osses, P.; García, J. L.

    2016-06-01

    In the coastal Atacama Desert in Northern Chile plant growth is constrained to so-called `fog oases' dominated by monospecific stands of the genus Tillandsia. Adapted to the hyperarid environmental conditions, these plants specialize on the foliar uptake of fog as main water and nutrient source. It is this characteristic that leads to distinctive macro- and micro-scale distribution patterns, reflecting complex geo-ecological gradients, mainly affected by the spatiotemporal occurrence of coastal fog respectively the South Pacific Stratocumulus clouds reaching inlands. The current work employs remote sensing, machine learning and spatial pattern/GIS analysis techniques to acquire detailed information on the presence and state of Tillandsia spp. in the Tarapacá region as a base to better understand the bioclimatic and topographic constraints determining the distribution patterns of Tillandsia spp. Spatial and spectral predictors extracted from WorldView-3 satellite data are used to map present Tillandsia vegetation in the Tarapaca region. Regression models on Vegetation Cover Fraction (VCF) are generated combining satellite-based as well as topographic variables and using aggregated high spatial resolution information on vegetation cover derived from UAV flight campaigns as a reference. The results are a first step towards mapping and modelling the topographic as well as bioclimatic factors explaining the spatial distribution patterns of Tillandsia fog oases in the Atacama, Chile.

  12. Spatial autocorrelation in farmland grasshopper assemblages (Orthoptera: Acrididae) in western France.

    Science.gov (United States)

    Badenhausser, I; Gouat, M; Goarant, A; Cornulier, T; Bretagnolle, V

    2012-10-01

    Agricultural intensification in western Europe has caused a dramatic loss of grassland surfaces in farmlands, which have resulted in strong declines in grassland invertebrates, leading to cascade effects at higher trophic levels among consumers of invertebrates. Grasshoppers are important components of grassland invertebrate assemblages in European agricultural ecosystems, particularly as prey for bird species. Understanding how grasshopper populations are distributed in fragmented landscapes with low grassland availability is critical for both studies in biodiversity conservation and insect management. We assessed the range and strength of spatial autocorrelation for two grasshopper taxa (Gomphocerinae subfamily and Calliptamus italicus L.) across an intensive farmland in western France. Data from surveys carried out over 8 yr in 1,715 grassland fields were analyzed using geostatistics. Weak spatial patterns were observed at small spatial scales, suggesting important local effects of management practices on grasshopper densities. Spatial autocorrelation patterns for both grasshopper taxa were only detected at intermediate scales. For Gomphocerinae, the range of spatial autocorrelation varied from 802 to 2,613 m according to the year, depending both on grasshopper density and on grassland surfaces in the study site, whereas spatial patterns for the Italian locust were more variable and not related to grasshopper density or grassland surfaces. Spatial patterns in the distribution of Gomphocerinae supported our hypothesis that habitat availability was a major driver of grasshopper distribution in the landscape, and suggested it was related to density-dependent processes such as dispersal.

  13. Morphology and spatial patterns of Macrotermes mounds in the SE Katanga, D.R. Congo

    Science.gov (United States)

    Bazirake Mujinya, Basile; Mees, Florias; Erens, Hans; Baert, Geert; Van Ranst, Eric

    2015-04-01

    The spatial distribution patterns and morphological characteristics of Macrotermes falciger mounds were investigated in the Lubumbashi area, D.R. Congo. Examination of the spatial patterns of M. falciger mounds on high resolution satellite images reveals a mean areal number density of 2.9 ± 0.4 mounds ha-1. The high relative number of inactive mounds in the region, along with their regular distribution pattern, suggests that current termite mound occurrences are largely palaeostructures. Mound positions in the habitat are consistent with intraspecific competition rather than soil and substrate characteristics as controlling factor. Detailed morphological description of five deep termite-mound profiles (~7 m height/depth) shows that carbonate pedofeatures are present in all studied profiles, in contrast to the control soils. They mainly occur in the form of soft powdery masses, nodules and coatings on ped faces, all clearly pedogenic. Carbonate coatings occur mainly between 1 m above the soil surface and 1 m below that level in all mound profiles. Carbonate nodules do show a different distribution pattern at each site. Furthermore, when the studied profiles are considered to represent a toposequence, the stone layer occurs at greater depth in topographically low areas compared to crest and slope positions, which is mainly conditioned by erosion. The clay content of epigeal mounds increases from the summit to the toe slope, which can be largely related to differences in parent material. The Mn-Fe oxide concentrations occurring in all studied termite mound profiles reflect a seasonally high perched water table beneath the mound, which is more pronounced at the lower slope positions.

  14. SPATIAL CLUSTER AND OUTLIER IDENTIFICATION OF GEOCHEMICAL ASSOCIATION OF ELEMENTS: A CASE STUDY IN JUIRUI COPPER MINING AREA

    Directory of Open Access Journals (Sweden)

    Tien Thanh NGUYEN

    2016-12-01

    Full Text Available Spatial clusters and spatial outliers play an important role in the study of the spatial distribution patterns of geochemical data. They characterize the fundamental properties of mineralization processes, the spatial distribution of mineral deposits, and ore element concentrations in mineral districts. In this study, a new method for the study of spatial distribution patterns of multivariate data is proposed based on a combination of robust Mahalanobis distance and local Moran’s Ii. In order to construct the spatial matrix, the Moran's I spatial correlogram was first used to determine the range. The robust Mahalanobis distances were then computed for an association of elements. Finally, local Moran’s Ii statistics was used to measure the degree of spatial association and discover the spatial distribution patterns of associations of Cu, Au, Mo, Ag, Pb, Zn, As, and Sb elements including spatial clusters and spatial outliers. Spatial patterns were analyzed at six different spatial scales (2km, 4 km, 6 km, 8 km, 10 km and 12 km for both the raw data and Box-Cox transformed data. The results show that identified spatial cluster and spatial outlier areas using local Moran’s Ii and the robust Mahalanobis accord the objective reality and have a good conformity with known deposits in the study area.

  15. Tree growth and competition in an old-growth Picea abies forest of boreal Sweden: influence of tree spatial patterning

    Science.gov (United States)

    Fraver, Shawn; D'Amato, Anthony W.; Bradford, John B.; Jonsson, Bengt Gunnar; Jönsson, Mari; Esseen, Per-Anders

    2013-01-01

    Question: What factors best characterize tree competitive environments in this structurally diverse old-growth forest, and do these factors vary spatially within and among stands? Location: Old-growth Picea abies forest of boreal Sweden. Methods: Using long-term, mapped permanent plot data augmented with dendrochronological analyses, we evaluated the effect of neighbourhood competition on focal tree growth by means of standard competition indices, each modified to include various metrics of trees size, neighbour mortality weighting (for neighbours that died during the inventory period), and within-neighbourhood tree clustering. Candidate models were evaluated using mixed-model linear regression analyses, with mean basal area increment as the response variable. We then analysed stand-level spatial patterns of competition indices and growth rates (via kriging) to determine if the relationship between these patterns could further elucidate factors influencing tree growth. Results: Inter-tree competition clearly affected growth rates, with crown volume being the size metric most strongly influencing the neighbourhood competitive environment. Including neighbour tree mortality weightings in models only slightly improved descriptions of competitive interactions. Although the within-neighbourhood clustering index did not improve model predictions, competition intensity was influenced by the underlying stand-level tree spatial arrangement: stand-level clustering locally intensified competition and reduced tree growth, whereas in the absence of such clustering, inter-tree competition played a lesser role in constraining tree growth. Conclusions: Our findings demonstrate that competition continues to influence forest processes and structures in an old-growth system that has not experienced major disturbances for at least two centuries. The finding that the underlying tree spatial pattern influenced the competitive environment suggests caution in interpreting traditional tree

  16. Spatial adaptation of the cortical visual evoked potential of the cat.

    Science.gov (United States)

    Bonds, A B

    1984-06-01

    Adaptation that is spatially specific for the adapting pattern has been seen psychophysically in humans. This is indirect evidence for independent analyzers (putatively single units) that are specific for orientation and spatial frequency in the human visual system, but it is unclear how global adaptation characteristics may be related to single unit performance. Spatially specific adaptation was sought in the cat visual evoked potential (VEP), with a view towards relating this phenomenon with what we know of cat single units. Adaptation to sine-wave gratings results in a temporary loss of cat VEP amplitude, with induction and recovery similar to that seen in human psychophysical experiments. The amplitude loss was specific for both the spatial frequency and orientation of the adapting pattern. The bandwidth of adaptation was not unlike the average selectivity of a population of cat single units.

  17. Self-Organisation in Spatial Systems-From Fractal Chaos to Regular Patterns and Vice Versa.

    Directory of Open Access Journals (Sweden)

    Michal Banaszak

    Full Text Available This study offers a new perspective on the evolutionary patterns of cities or urban agglomerations. Such developments can range from chaotic to fully ordered. We demonstrate that in a dynamic space of interactive human behaviour cities produce a wealth of gravitational attractors whose size and shape depend on the resistance of space emerging inter alia from transport friction costs. This finding offers original insights into the complex evolution of spatial systems and appears to be consistent with the principles of central place theory known from the spatial sciences and geography. Our approach is dynamic in nature and forms a generalisation of hierarchical principles in geographic space.

  18. Spatial and Time Pattern Distribution of Water Birds Community at Mangrove Ecosystem of Bengawan Solo Estuary - Gresik Regency

    Directory of Open Access Journals (Sweden)

    Sutopo .

    2018-01-01

    Full Text Available Mangrove ecosystem in Bengawan Solo estuary is a part of the essential ecosystem and also as important and endemic birds’ areas. Aim of this study is to analysis the parameter of habitat condition, analysis the different of time and spatial pattern and provide the management strategy for water birds and habitat. Reseach was carry out at January – May, 2017 (two period observation. Methods are used i.e. concentration count, single and unit plot, point count, interview and field observation. Data analyze using chi-square, grid-line point and mark point, beak-type and vegetation analysis. There are 41 (forty one species of water birds (23 migrant species and 17 native species. Chi-square analysis have significance difference both the time and spatial and also type of feed with chi-square values (χ2 hit.(2;0,95 > χ2 tab.(2;0,95. Migrant birds’ occupy the mudflat for feeding and resting ground, while the native birds use pond areas. Common the invertebrate species as feed for migrant like crustace and native birds are tend to feed fish and shrimp. Feeding and resting activities by migrant birds was influence by water-tidal condition. Total of water birds population are 112.100+ individual. Total of mangrove species was identified are 15 (fifteen species, and dominant at three habitus by Avicennia alba.Keywords: Bengawan Solo Estuary, mangrove ecosystem, spatial and time, water birds

  19. Capturing and analyzing wheelchair maneuvering patterns with mobile cloud computing.

    Science.gov (United States)

    Fu, Jicheng; Hao, Wei; White, Travis; Yan, Yuqing; Jones, Maria; Jan, Yih-Kuen

    2013-01-01

    Power wheelchairs have been widely used to provide independent mobility to people with disabilities. Despite great advancements in power wheelchair technology, research shows that wheelchair related accidents occur frequently. To ensure safe maneuverability, capturing wheelchair maneuvering patterns is fundamental to enable other research, such as safe robotic assistance for wheelchair users. In this study, we propose to record, store, and analyze wheelchair maneuvering data by means of mobile cloud computing. Specifically, the accelerometer and gyroscope sensors in smart phones are used to record wheelchair maneuvering data in real-time. Then, the recorded data are periodically transmitted to the cloud for storage and analysis. The analyzed results are then made available to various types of users, such as mobile phone users, traditional desktop users, etc. The combination of mobile computing and cloud computing leverages the advantages of both techniques and extends the smart phone's capabilities of computing and data storage via the Internet. We performed a case study to implement the mobile cloud computing framework using Android smart phones and Google App Engine, a popular cloud computing platform. Experimental results demonstrated the feasibility of the proposed mobile cloud computing framework.

  20. GEMAS: Molybdenum Spatial Distribution Patterns in European Soil

    Science.gov (United States)

    Cicchella, Domenico; Zuzolo, Daniela; Demetriades, Alecos; De Vivo, Benedetto; Eklund, Mikael; Ladenberger, Anna; Negrel, Philippe; O'Connor, Patrick

    2017-04-01

    Molybdenum is an essential trace element for both plants and animals as well as for human being. It is one such trace element for which potential health concerns have been raised but for which few data exist and little investigation or interpretation of distributions in soils has been made. The main goal of this study was to fill this gap. Molybdenum (Mo) concentrations are reported for the similar spatial distribution patterns mainly governed by geology (parent material and mineralisation), as well as weathering, soil formation and climate since the last glaciations period. The dominant feature is represented by low Mo concentrations over the coarse-grained sandy deposits of the last glaciations in central northern Europe while the most extensive anomalies occur in Scandinavian soils. The highest Mo concentration value occurs to the North of Oslo close to one of the largest porphyry Mo deposit of the World. Some interesting anomalous patterns occur also in Italy in correspondence with alkaline volcanics, in Spain and Greece associated with sulfides mineralizations and in Slovenia and Croatia where are probably related to the long weathering history of karstic residual soils. Anomalous concentrations in some areas of Ireland represent a clear example of how an excess of molybdenum has produced potentially toxic pastures. In fact, these give rise to problems particularly in young cattle when excess molybdenum in the herbage acts as an antagonist, which militates against efficient copper absorption by the animal.

  1. Spatial patterns of drought persistence in East China

    Science.gov (United States)

    Meng, L.; Ford, T.

    2017-12-01

    East China has experienced a number of severe droughts in recent decades. Understanding the characteristics of droughts and their persistence will provide operational guidelines for water resource management and agricultural production. This study uses a logistic regression model to measure the probability of drought occurrence in the current season given the previous season's Standardized Precipitation Index (SPI) and Southern Oscillation Index (SOI) as well as drought persistence. Results reveal large spatial and seasonal variations in the relationship between the previous season's SPI and the drought occurrence probability in a given season. The drought persistence averaged over the entire study area for all the four seasons is approximately 34% with large variations from season to season and from region to region. The East and Northeast regions have the largest summer drought persistence ( 40%) and lowest fall drought persistence ( 28%). The spatial pattern in winter and spring drought persistence is dissimilar with stronger winter and weaker spring drought persistence in the Southwest and Northeast relative to other regions. Logistic regression analysis indicates a stronger negative relationship in summer-to-fall (or between fall drought occurrence and summer SPI) than other inter-season relationships. This study demonstrates that the impact of previous season SPI and SOI on current season drought varies substantially from region to region and from season to season. This study also shows stronger drought persistence in summer than in other seasons. In other words, the probability of fall drought occurrence is closely related to summer moisture conditions in the East China.

  2. Spatial patterns of persistent neural activity vary with the behavioral context of short-term memory.

    Science.gov (United States)

    Daie, Kayvon; Goldman, Mark S; Aksay, Emre R F

    2015-02-18

    A short-term memory can be evoked by different inputs and control separate targets in different behavioral contexts. To address the circuit mechanisms underlying context-dependent memory function, we determined through optical imaging how memory is encoded at the whole-network level in two behavioral settings. Persistent neural activity maintaining a memory of desired eye position was imaged throughout the oculomotor integrator after saccadic or optokinetic stimulation. While eye position was encoded by the amplitude of network activity, the spatial patterns of firing were context dependent: cells located caudally generally were most persistent following saccadic input, whereas cells located rostrally were most persistent following optokinetic input. To explain these data, we computationally identified four independent modes of network activity and found these were differentially accessed by saccadic and optokinetic inputs. These results show how a circuit can simultaneously encode memory value and behavioral context, respectively, in its amplitude and spatial pattern of persistent firing. Copyright © 2015 Elsevier Inc. All rights reserved.

  3. Climate vs. topography – spatial patterns of plant species diversity and endemism on a high-elevation island

    DEFF Research Database (Denmark)

    Irl, Severin David Howard; Harter, David E. V.; Steinbauer, Manuel

    2015-01-01

    the independent contribution of climatic and topographic variables to spatial diversity patterns. We constructed a presence/absence matrix of perennial endemic and native vascular plant species (including subspecies) in 890 plots on the environmentally very heterogeneous island of La Palma, Canary Islands......Climate and topography are among the most fundamental drivers of plant diversity. Here, we assessed the importance of climate and topography in explaining diversity patterns of species richness, endemic richness and endemicity on the landscape scale of an oceanic island and evaluated...... to ecological speciation and specialization to local conditions. We highlight the importance of incorporating climatic variability into future studies of plant species diversity and endemism. The spatial incongruence in hot spots of species richness, endemic richness and endemicity emphasizes the need...

  4. Contrasting spatial patterns in active-fire and fire-suppressed Mediterranean climate old-growth mixed conifer forests.

    Directory of Open Access Journals (Sweden)

    Danny L Fry

    Full Text Available In Mediterranean environments in western North America, historic fire regimes in frequent-fire conifer forests are highly variable both temporally and spatially. This complexity influenced forest structure and spatial patterns, but some of this diversity has been lost due to anthropogenic disruption of ecosystem processes, including fire. Information from reference forest sites can help management efforts to restore forests conditions that may be more resilient to future changes in disturbance regimes and climate. In this study, we characterize tree spatial patterns using four-ha stem maps from four old-growth, Jeffrey pine-mixed conifer forests, two with active-fire regimes in northwestern Mexico and two that experienced fire exclusion in the southern Sierra Nevada. Most of the trees were in patches, averaging six to 11 trees per patch at 0.007 to 0.014 ha(-1, and occupied 27-46% of the study areas. Average canopy gap sizes (0.04 ha covering 11-20% of the area were not significantly different among sites. The putative main effects of fire exclusion were higher densities of single trees in smaller size classes, larger proportion of trees (≥ 56% in large patches (≥ 10 trees, and decreases in spatial complexity. While a homogenization of forest structure has been a typical result from fire exclusion, some similarities in patch, single tree, and gap attributes were maintained at these sites. These within-stand descriptions provide spatially relevant benchmarks from which to manage for structural heterogeneity in frequent-fire forest types.

  5. Pattern-mixture models for analyzing normal outcome data with proxy respondents.

    Science.gov (United States)

    Shardell, Michelle; Hicks, Gregory E; Miller, Ram R; Langenberg, Patricia; Magaziner, Jay

    2010-06-30

    Studies of older adults often involve interview questions regarding subjective constructs such as perceived disability. In some studies, when subjects are unable (e.g. due to cognitive impairment) or unwilling to respond to these questions, proxies (e.g. relatives or other care givers) are recruited to provide responses in place of the subject. Proxies are usually not approached to respond on behalf of subjects who respond for themselves; thus, for each subject, data from only one of the subject or proxy are available. Typically, proxy responses are simply substituted for missing subject responses, and standard complete-data analyses are performed. However, this approach may introduce measurement error and produce biased parameter estimates. In this paper, we propose using pattern-mixture models that relate non-identifiable parameters to identifiable parameters to analyze data with proxy respondents. We posit three interpretable pattern-mixture restrictions to be used with proxy data, and we propose estimation procedures using maximum likelihood and multiple imputation. The methods are applied to a cohort of elderly hip-fracture patients. (c) 2010 John Wiley & Sons, Ltd.

  6. Spatial distribution pattern of vanadium in hydric landscapes

    Science.gov (United States)

    Fiedler, Sabine; Breuer, Jörn; Palmer, Iris; Berger, Jochen

    2010-05-01

    landscapes. Independent from the parent material, we found a distinct spatial pattern of V, which reflected that of the local redox environment: Horizons/pedons with oxic conditions revealed a positive correlation between V content and Fe content. In this case, iron oxides act as an important sink for dissolved V which originated from other locations of the catena. Poorly drained soils, such as Stagnosols for example, promote both Fe and V reduction, which is coupled to their removal from the pedons by leaching. It can be demonstrated that the element-specific Eh window for differential reduction is very narrow. The spatial distribution of both elements shows that high V contents are often associated with low Fe contents. It is therefore assumed that a reducing environment promotes Fe3+ reduction, while maintaining while maintaining V stable.

  7. Gender and spatial population mobility in Iran.

    Science.gov (United States)

    Hemmasi, M

    1994-01-01

    1976-1986 data from the National Census of Population and Housing were analyzed to examine the spatial patterns of internal migration of women and men in Iran within its Islamic patriarchal cultural system. The researcher also organized 1986 data into two interprovincial migration matrixes for men and women. Women were spatially as mobile as men (urban, 16.7% for men and 17% for women; rural, 8.4% and 8.9%, respectively). Gender spatial mobility patterns during the 10 years included: migration streams from nine provinces consistently led to Tehran province, most migration flows to Tehran and most other provinces originated from Khuzistan, East Azerbaijan province still continued to lose population (about 500,000), and out-flows generally originated from the provinces affected by the Iran-Iraq war and went to the central and eastern provinces. The strongest determinants of women's migration was men's migration ratio and the road distance between the origin and destination. Reasons for these strong associations were few employed women ( 10%), strong family ties, and traditional cultural values (e.g., women tend not to travel alone). So their migration patterns tended to be associational rather than autonomous. Despite the fact that internal migration patterns of men and women were the same, the causes, processes, and consequences of migration were still very gender-specific in Iran. There are no signs of change in the near future.

  8. Integrative Spatial Data Analytics for Public Health Studies of New York State.

    Science.gov (United States)

    Chen, Xin; Wang, Fusheng

    2016-01-01

    Increased accessibility of health data made available by the government provides unique opportunity for spatial analytics with much higher resolution to discover patterns of diseases, and their correlation with spatial impact indicators. This paper demonstrated our vision of integrative spatial analytics for public health by linking the New York Cancer Mapping Dataset with datasets containing potential spatial impact indicators. We performed spatial based discovery of disease patterns and variations across New York State, and identify potential correlations between diseases and demographic, socio-economic and environmental indicators. Our methods were validated by three correlation studies: the correlation between stomach cancer and Asian race, the correlation between breast cancer and high education population, and the correlation between lung cancer and air toxics. Our work will allow public health researchers, government officials or other practitioners to adequately identify, analyze, and monitor health problems at the community or neighborhood level for New York State.

  9. Twentieth-century fire patterns in the Selway-Bitterroot Wilderness Area, Idaho/Montana, and the Gila/Aldo Leopold Wilderness Complex, New Mexico

    Science.gov (United States)

    Matthew Rollins; Tom Swetnam; Penelope Morgan

    2000-01-01

    Twentieth century fire patterns were analyzed for two large, disparate wilderness areas in the Rocky Mountains. Spatial and temporal patterns of fires were represented as GIS-based digital fire atlases compiled from archival Forest Service data. We find that spatial and temporal fire patterns are related to landscape features and changes in land use. The rate and...

  10. Spatial and temporal patterns of burned area over Brazilian Cerrado from 2005 to 2015 using remote sensing data

    Science.gov (United States)

    Libonati, Renata; DaCamara, Carlos; Setzer, Alberto

    2016-04-01

    reflectances to discriminate BA. Validation over Cerrado biome indicates that the product is in accordance with BA maps from reference data, making the product suitable for applications in fire emission studies and ecosystem management. The AQM regional database covers the 11-year period 2005-2015 over Cerrado and allows analyzing the overall temporal and spatial distribution patterns of BA for the last decade. The highest monthly mean amount is observed in September, followed by October, and March presents the lowest amount. The most severe year is 2007, followed by 2005 and 2010; 2006 and 2009 are the years with less area burned, followed by 2008. The spatial pattern of BA shows that the north region of Cerrado presents the highest frequency of occurrence. The intra and inter-annual variability of BA over Cerrado are closely related to variability of precipitation but it is worth emphasizing that, despite the major role played by climate conditions, the human factor has also a prominent role on fire dynamics in this region and cannot be disregarded.

  11. Analyzing the causes and spatial pattern of the European 2003 carbon flux anomaly using seven models

    Directory of Open Access Journals (Sweden)

    M. Vetter

    2008-04-01

    Full Text Available Globally, the year 2003 is associated with one of the largest atmospheric CO2 rises on record. In the same year, Europe experienced an anomalously strong flux of CO2 from the land to the atmosphere associated with an exceptionally dry and hot summer in Western and Central Europe. In this study we analyze the magnitude of this carbon flux anomaly and key driving ecosystem processes using simulations of seven terrestrial ecosystem models of different complexity and types (process-oriented and diagnostic. We address the following questions: (1 how large were deviations in the net European carbon flux in 2003 relative to a short-term baseline (1998–2002 and to longer-term variations in annual fluxes (1980 to 2005, (2 which European regions exhibited the largest changes in carbon fluxes during the growing season 2003, and (3 which ecosystem processes controlled the carbon balance anomaly .

    In most models the prominence of 2003 anomaly in carbon fluxes declined with lengthening of the reference period from one year to 16 years. The 2003 anomaly for annual net carbon fluxes ranged between 0.35 and –0.63 Pg C for a reference period of one year and between 0.17 and –0.37 Pg C for a reference period of 16 years for the whole Europe.

    In Western and Central Europe, the anomaly in simulated net ecosystem productivity (NEP over the growing season in 2003 was outside the 1σ variance bound of the carbon flux anomalies for 1980–2005 in all models. The estimated anomaly in net carbon flux ranged between –42 and –158 Tg C for Western Europe and between 24 and –129 Tg C for Central Europe depending on the model used. All models responded to a dipole pattern of the climate anomaly in 2003. In Western and Central Europe NEP was reduced due to heat and drought. In contrast, lower than normal temperatures and higher air humidity decreased NEP over Northeastern Europe. While models agree on the sign of changes in

  12. Movement of foraging Tundra Swans explained by spatial pattern in cryptic food densities.

    Science.gov (United States)

    Klaassen, Raymond H G; Nolet, Bart A; Bankert, Daniëlle

    2006-09-01

    We tested whether Tundra Swans use information on the spatial distribution of cryptic food items (below ground Sago pondweed tubers) to shape their movement paths. In a continuous environment, swans create their own food patches by digging craters, which they exploit in several feeding bouts. Series of short (1 m). Tuber biomass densities showed a positive spatial auto-correlation at a short distance (25 g/m2) and to a more distant patch (at 7-8 m) if the food density in the current patch had been low (3 m) from a low-density patch and a short distance (<3 m) from a high-density patch. The quantitative agreement between prediction and observation was greater for swans feeding in pairs than for solitary swans. The result of this movement strategy is that swans visit high-density patches at a higher frequency than on offer and, consequently, achieve a 38% higher long-term gain rate. Swans also take advantage of spatial variance in food abundance by regulating the time in patches, staying longer and consuming more food from rich than from poor patches. We can conclude that the shape of the foraging path is a reflection of the spatial pattern in the distribution of tuber densities and can be understood from an optimal foraging perspective.

  13. Comparison of tests for spatial heterogeneity on data with global clustering patterns and outliers

    Directory of Open Access Journals (Sweden)

    Hachey Mark

    2009-10-01

    Full Text Available Abstract Background The ability to evaluate geographic heterogeneity of cancer incidence and mortality is important in cancer surveillance. Many statistical methods for evaluating global clustering and local cluster patterns are developed and have been examined by many simulation studies. However, the performance of these methods on two extreme cases (global clustering evaluation and local anomaly (outlier detection has not been thoroughly investigated. Methods We compare methods for global clustering evaluation including Tango's Index, Moran's I, and Oden's I*pop; and cluster detection methods such as local Moran's I and SaTScan elliptic version on simulated count data that mimic global clustering patterns and outliers for cancer cases in the continental United States. We examine the power and precision of the selected methods in the purely spatial analysis. We illustrate Tango's MEET and SaTScan elliptic version on a 1987-2004 HIV and a 1950-1969 lung cancer mortality data in the United States. Results For simulated data with outlier patterns, Tango's MEET, Moran's I and I*pop had powers less than 0.2, and SaTScan had powers around 0.97. For simulated data with global clustering patterns, Tango's MEET and I*pop (with 50% of total population as the maximum search window had powers close to 1. SaTScan had powers around 0.7-0.8 and Moran's I has powers around 0.2-0.3. In the real data example, Tango's MEET indicated the existence of global clustering patterns in both the HIV and lung cancer mortality data. SaTScan found a large cluster for HIV mortality rates, which is consistent with the finding from Tango's MEET. SaTScan also found clusters and outliers in the lung cancer mortality data. Conclusion SaTScan elliptic version is more efficient for outlier detection compared with the other methods evaluated in this article. Tango's MEET and Oden's I*pop perform best in global clustering scenarios among the selected methods. The use of SaTScan for

  14. Summer spatial patterning of chukars in relation to free water in Western Utah

    Science.gov (United States)

    Larsen, R.T.; Bissonette, J.A.; Flinders, J.T.; Hooten, M.B.; Wilson, T.L.

    2010-01-01

    Free water is considered important to wildlife in arid regions. In the western United States, thousands of water developments have been built to benefit wildlife in arid landscapes. Agencies and researchers have yet to clearly demonstrate their effectiveness. We combined a spatial analysis of summer chukar (Alectoris chukar) covey locations with dietary composition analysis in western Utah. Our specific objectives were to determine if chukars showed a spatial pattern that suggested association with free water in four study areas and to document summer dietary moisture content in relation to average distance from water. The observed data for the Cedar Mountains study area fell within the middle of the random mean distance to water distribution suggesting no association with free water. The observed mean distance to water for the other three areas was much closer than expected compared to a random spatial process, suggesting the importance of free water to these populations. Dietary moisture content of chukar food items from the Cedar Mountains (59%) was significantly greater (P model error components in future ecological research. ?? Springer Science+Business Media B.V. 2009.

  15. Determinants of spatial distribution in a bee community: nesting resources, flower resources, and body size.

    Science.gov (United States)

    Torné-Noguera, Anna; Rodrigo, Anselm; Arnan, Xavier; Osorio, Sergio; Barril-Graells, Helena; da Rocha-Filho, Léo Correia; Bosch, Jordi

    2014-01-01

    Understanding biodiversity distribution is a primary goal of community ecology. At a landscape scale, bee communities are affected by habitat composition, anthropogenic land use, and fragmentation. However, little information is available on local-scale spatial distribution of bee communities within habitats that are uniform at the landscape scale. We studied a bee community along with floral and nesting resources over a 32 km2 area of uninterrupted Mediterranean scrubland. Our objectives were (i) to analyze floral and nesting resource composition at the habitat scale. We ask whether these resources follow a geographical pattern across the scrubland at bee-foraging relevant distances; (ii) to analyze the distribution of bee composition across the scrubland. Bees being highly mobile organisms, we ask whether bee composition shows a homogeneous distribution or else varies spatially. If so, we ask whether this variation is irregular or follows a geographical pattern and whether bees respond primarily to flower or to nesting resources; and (iii) to establish whether body size influences the response to local resource availability and ultimately spatial distribution. We obtained 6580 specimens belonging to 98 species. Despite bee mobility and the absence of environmental barriers, our bee community shows a clear geographical pattern. This pattern is mostly attributable to heterogeneous distribution of small (<55 mg) species (with presumed smaller foraging ranges), and is mostly explained by flower resources rather than nesting substrates. Even then, a large proportion (54.8%) of spatial variability remains unexplained by flower or nesting resources. We conclude that bee communities are strongly conditioned by local effects and may exhibit spatial heterogeneity patterns at a scale as low as 500-1000 m in patches of homogeneous habitat. These results have important implications for local pollination dynamics and spatial variation of plant-pollinator networks.

  16. Determinants of spatial distribution in a bee community: nesting resources, flower resources, and body size.

    Directory of Open Access Journals (Sweden)

    Anna Torné-Noguera

    Full Text Available Understanding biodiversity distribution is a primary goal of community ecology. At a landscape scale, bee communities are affected by habitat composition, anthropogenic land use, and fragmentation. However, little information is available on local-scale spatial distribution of bee communities within habitats that are uniform at the landscape scale. We studied a bee community along with floral and nesting resources over a 32 km2 area of uninterrupted Mediterranean scrubland. Our objectives were (i to analyze floral and nesting resource composition at the habitat scale. We ask whether these resources follow a geographical pattern across the scrubland at bee-foraging relevant distances; (ii to analyze the distribution of bee composition across the scrubland. Bees being highly mobile organisms, we ask whether bee composition shows a homogeneous distribution or else varies spatially. If so, we ask whether this variation is irregular or follows a geographical pattern and whether bees respond primarily to flower or to nesting resources; and (iii to establish whether body size influences the response to local resource availability and ultimately spatial distribution. We obtained 6580 specimens belonging to 98 species. Despite bee mobility and the absence of environmental barriers, our bee community shows a clear geographical pattern. This pattern is mostly attributable to heterogeneous distribution of small (<55 mg species (with presumed smaller foraging ranges, and is mostly explained by flower resources rather than nesting substrates. Even then, a large proportion (54.8% of spatial variability remains unexplained by flower or nesting resources. We conclude that bee communities are strongly conditioned by local effects and may exhibit spatial heterogeneity patterns at a scale as low as 500-1000 m in patches of homogeneous habitat. These results have important implications for local pollination dynamics and spatial variation of plant-pollinator networks.

  17. Spatial patterns of agricultural expansion determine impacts on biodiversity and carbon storage.

    Science.gov (United States)

    Chaplin-Kramer, Rebecca; Sharp, Richard P; Mandle, Lisa; Sim, Sarah; Johnson, Justin; Butnar, Isabela; Milà I Canals, Llorenç; Eichelberger, Bradley A; Ramler, Ivan; Mueller, Carina; McLachlan, Nikolaus; Yousefi, Anahita; King, Henry; Kareiva, Peter M

    2015-06-16

    The agricultural expansion and intensification required to meet growing food and agri-based product demand present important challenges to future levels and management of biodiversity and ecosystem services. Influential actors such as corporations, governments, and multilateral organizations have made commitments to meeting future agricultural demand sustainably and preserving critical ecosystems. Current approaches to predicting the impacts of agricultural expansion involve calculation of total land conversion and assessment of the impacts on biodiversity or ecosystem services on a per-area basis, generally assuming a linear relationship between impact and land area. However, the impacts of continuing land development are often not linear and can vary considerably with spatial configuration. We demonstrate what could be gained by spatially explicit analysis of agricultural expansion at a large scale compared with the simple measure of total area converted, with a focus on the impacts on biodiversity and carbon storage. Using simple modeling approaches for two regions of Brazil, we find that for the same amount of land conversion, the declines in biodiversity and carbon storage can vary two- to fourfold depending on the spatial pattern of conversion. Impacts increase most rapidly in the earliest stages of agricultural expansion and are more pronounced in scenarios where conversion occurs in forest interiors compared with expansion into forests from their edges. This study reveals the importance of spatially explicit information in the assessment of land-use change impacts and for future land management and conservation.

  18. Geostatistics and Geographic Information System to Analyze the Spatial Distribution of the Diversity of Anastrepha Species (Diptera: Tephritidae): the Effect of Forest Fragments in an Urban Area.

    Science.gov (United States)

    Garcia, A G; Araujo, M R; Uramoto, K; Walder, J M M; Zucchi, R A

    2017-12-08

    Fruit flies are among the most damaging insect pests of commercial fruit in Brazil. It is important to understand the landscape elements that may favor these flies. In the present study, spatial data from surveys of species of Anastrepha Schiner (Diptera: Tephritidae) in an urban area with forest fragments were analyzed, using geostatistics and Geographic Information System (GIS) to map the diversity of insects and evaluate how the forest fragments drive the spatial patterns. The results indicated a high diversity of species associated with large fragments, and a trend toward lower diversity in the more urbanized area, as the fragment sizes decreased. We concluded that the diversity of Anastrepha species is directly and positively related to large and continuous forest fragments in urbanized areas, and that combining geostatistics and GIS is a promising method for use in insect-pest management and sampling involving fruit flies. © The Authors 2017. Published by Oxford University Press on behalf of Entomological Society of America. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  19. Patterns of preserved and impaired spatial memory in a case of developmental amnesia

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    R Shayna eRosenbaum

    2015-05-01

    Full Text Available The hippocampus is believed to have evolved to support allocentric spatial representations of environments as well as the details of personal episodes that occur within them, whereas other brain structures are believed to support complementary egocentric spatial representations. Studies of patients with adult-onset lesions lend support to these distinctions for newly encountered places but suggest that with time and/or experience, schematic aspects of environments can exist independent of the hippocampus. Less clear is the quality of spatial memories acquired in individuals with impaired episodic memory in the context of a hippocampal system that did not develop normally. Here we describe a detailed investigation of the integrity of spatial representations of environments navigated repeatedly over many years in the rare case of H.C., a person with congenital absence of the mammillary bodies and abnormal hippocampal and fornix development. H.C. and controls who had extensive experience navigating the residential and downtown areas known to H.C. were tested on mental navigation tasks that assess the identity, location, and spatial relations among landmarks, and the ability to represent routes. H.C. was able to represent distances and directions between familiar landmarks and provide accurate, though inefficient, route descriptions. However, difficulties producing detailed spatial features on maps and accurately ordering more than two landmarks that are in close proximity to one another along a route suggest a spatial representation that includes only coarse, schematic information that lacks coherence and that cannot be used flexibly. This pattern of performance is considered in the context of other areas of preservation and impairment exhibited by H.C. and suggests that the allocentric-egocentric dichotomy with respect to hippocampal and extended hippocampal system function may need to be reconsidered.

  20. Spatial And Temporal Patterns As Well As Major Influencing Factors Of Global And Diffuse Horizontal Irradiance Over China: 1960-2014

    Science.gov (United States)

    Wang, H.; Sun, F.

    2017-12-01

    Global Horizontal Irradiance (GHI) on Earth is a central element of climate systems. With changes in the climate and regional development, the patterns and influencing factors of GHI, in addition to presenting global consistency, are increasingly showing regional particularities. Based on data for GHI, Diffuse Horizontal Irradiance (DHI) and potential impact factors (geographical position, elevation, cloud cover, water vapor, and ground atmospheric transparency related variables) from 1960 to 2014 in China, we analyzed the pattern and major influencing factors of GHI and DHI. The results showed that the major influencing factors of the GHI spatial pattern were the total cloud cover (TCC) and relative humidity (RH) in China. Dividing all of China into two regions, the major factors were the water vapor pressure (WVP) in the northern region and TCC in the southern region. And we divided the GHI and DHI data into two periods (1960-1987 and 1988-2014) due to global dimming and brightening observed in China in the late 1980's. The temporal GHI showed that 31 of 58 decreased significantly with an average decreasing rate of 95 MJ.10yr-1 during the periods of 1960-2014 and 49 of 76 stations decreased significantly with an rate of 342 MJ.10yr-1 during 1960-1987, whereas 57 of 88 stations did not change and 24 stations increased significantly with an rate of 201 MJ.10yr-1 during the period of 1988-2014. The temporal DHI showed that 40 of 61sites did not change significantly from 1960 to 1987. The major influencing factors for temporal changes of GHI in nine typical cities from 1960 to 2013 were as follows: air quality-related variables in super cities, sandstorms and wind in desert oasis cities, clouds in cities with good air quality and a low cloud amount (LCA) and annual fog days (FD) in Chengdu. Overall, we identified characteristics of GHI and DHI based on global climate change and regional urban development and found that the spatial characteristics of GHI results for

  1. Analysis on the Changing Spatial Patterns of China's Migration in 1985-2010

    Science.gov (United States)

    Zan, Q.; Bian, Y.

    2014-11-01

    Based on the data of China's fourth, fifth and sixth population census, taking the seven geographical zone as research units, the Changing Spatial Patterns of China's Migration in 1985-2010 is studied by the means of spatial analysis and mathematical statistics. The empirical results show that: (1) The migration population in China was increasing a lot in 1985-2010, and the main part of it is Provincial migration. (2) The total number of migration, immigration and emigration, the relative proportion of inter provincial and provincial migration have been positively correlated to the regional economic development level. (3) The emigrations from Hong Kong, Macao, Taiwan and overseas mainly moved to East and North China. (4) Central and west of China are the main area where people outflowed from, and most migration population moved to south-eastern coastal areas. The migration in Northeast and northwest of China is still relatively small. The main direction of population migration and flowing is from west to east and from north to south.

  2. Exploratory Temporal and Spatial Analysis of Myocardial Infarction Hospitalizations in Calgary, Canada

    Directory of Open Access Journals (Sweden)

    Xiaoxiao Liu

    2017-12-01

    Full Text Available Spatial and temporal analyses are critical to understand the pattern of myocardial infarction (MI hospitalizations over space and time, and to identify their underlying determinants. In this paper, we analyze MI hospitalizations in Calgary from 2004 to 2013, stratified by age and gender. First, a seasonal trend decomposition analyzes the seasonality; then a linear regression models the trend component. Moran’s I and hot spot analyses explore the spatial pattern. Though exploratory, results show that most age and gender groups feature a statistically significant decline over the 10 years, consistent with previous studies in Canada. Decline rates vary across ages and genders, with the slowest decline observed for younger males. Each gender exhibits a seasonal pattern with peaks in both winter and summer. Spatially, MI hot spots are identified in older communities, and in socioeconomically and environmentally disadvantaged communities. In the older communities, higher MI rates appear to be more highly associated with demographics. Conversely, worse air quality appears to be locally associated with higher MI incidence in younger age groups. The study helps identify areas of concern, where MI hot spots are identified for younger age groups, suggesting the need for localized public health policies to target local risk factors.

  3. Statistical, Spatial and Temporal Mapping of 911 Emergencies in Ecuador

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    Danilo Corral-De-Witt

    2018-01-01

    Full Text Available A public safety answering point (PSAP receives alerts and attends to emergencies that occur in its responsibility area. The analysis of the events related to a PSAP can give us relevant information in order to manage them and to improve the performance of the first response institutions (FRIs associated to every PSAP. However, current emergency systems are growing dramatically in terms of information heterogeneity and the volume of attended requests. In this work, we propose a system for statistical, spatial, and temporal analysis of incidences registered in a PSAP by using simple, yet robust and compact, event representations. The selected and designed temporal analysis tools include seasonal representations and nonparametric confidence intervals (CIs, which dissociate the main seasonal components and the transients. The spatial analysis tools include a straightforward event location over Google Maps and the detection of heat zones by means of bidimensional geographic Parzen windows with automatic width control in terms of the scales and the number of events in the region of interest. Finally, statistical representations are used for jointly analyzing temporal and spatial data in terms of the “time–space slices”. We analyzed the total number of emergencies that were attended during 2014 by seven FRIs articulated in a PSAP at the Ecuadorian 911 Integrated Security Service. Characteristic weekly patterns were observed in institutions such as the police, health, and transit services, whereas annual patterns were observed in firefighter events. Spatial and spatiotemporal analysis showed some expected patterns together with nontrivial differences among different services, to be taken into account for resource management. The proposed analysis allows for a flexible analysis by combining statistical, spatial and temporal information, and it provides 911 service managers with useful and operative information.

  4. A.A.G. Annual Conference Participation: The Spatial Dimension.

    Science.gov (United States)

    Fairweather, Malcolm

    This paper analyzes the spatial patterning of participants attending four annual conferences of the Association of American Geographers (AAG). The four most recent conventions were selected for the study: Los Angeles in 1981, Louisville in 1980, Philadelphia in 1979, and New Orleans in 1980. A conference participant is defined as a person whose…

  5. Spatial patterns and secular trends in human leishmaniasis incidence in Morocco between 2003 and 2013.

    Science.gov (United States)

    Sadeq, Mina

    2016-05-11

    Few studies on spatial patterns or secular trends in human leishmanias have been conducted in Morocco. This study aimed to examine spatial patterns and trends associated with the human leishmaniasis incidence rate (HLIR) at the province/prefecture level between 2003 and 2013 in Morocco. Only the available published country data on the HLIR between 2003 and 2013, from the open access files of the Ministry of Health, were used. Secular trends were examined using Kendall's rank correlation. An exploratory spatial data analysis was also conducted to examine the spatial autocorrelation (Global Moran's I and local indicator of spatial association [LISA]), and spatial diffusion at the province/prefecture level. The influence of various covariates (poverty rate, vulnerability rate, population density, and urbanization) on the HLIR was tested via spatial regression (ordinary least squares regression). At the country level, no secular variation was observed. Poisson annual incidence rate estimates were 13 per 100 000 population (95 % CI = 12.9-13.1) for cutaneous leishmaniasis (CL) and 0.4 per 100 000 population (95 % CI = 0.4-0.5) for visceral leishmaniasis (VL). The available data on HLIR were based on combined CL and VL cases, however, as the CL cases totally outnumbered the VL ones, HLIR may be considered as CL incidence rate. At the provincial level, a secular increase in the incidence rate was observed in Al Hoceima (P = 0.008), Taounate (P = 0.04), Larache (P = 0.002), Tétouan (P = 0.0003), Khenifra (P = 0.008), Meknes (P = 0.03), and El Kelaa (P = 0.0007), whereas a secular decrease was observed only in the Chichaoua province (P = 0.006). Even though increased or decreased rate was evident in these provinces, none of them showed clustering of leishmaniasis incidence. Significant spatial clusters of high leishmaniasis incidence were located in the northeastern part of Morocco, while spatial clusters of low leishmaniasis

  6. Population ecology of Paepalanthus polyanthus (Bong. Kunth: temporal variation in the pattern of spatial distribution

    Directory of Open Access Journals (Sweden)

    Tânia Tarabini Castellani

    2004-11-01

    Full Text Available The temporal variation in density and pattern of spatial distribution of Paepalanthus polyanthus (BONG. Kunth (Eriocaulaceae were evaluated at a determinate sand dune. This study was carried out over a period of five years, at three permanent plots of 25m2 in a sand dune slack at Joaquina Beach, Florianópolis, SC, Brazil. There were strong density fluctuations throughout these years. In areas 1, 2 and 3, the densities changed from 10.4, 2.2 and 1.8 plants/m2 in December 1986 to 75.8, 11.4 and 45.6 plants/m2 in December 1991. Area 3, situated on an elevated site, presented greater variation in density, with no live plants in December 1989 and 102.2 plants/m2 at the recruitment observed in May 1990. Despite these density fluctuations, the pattern of spatial distribution was always aggregated (Id>1, P<0.05. The greatest Id values occurred in periods of low density and not in those of high density, associated with seedling recruitment. Factors such as high seed production with low dispersal, massive germination in moit years and a comparatively high death rate of seedlings at sites more subject to flooding or more distant from the water table proved themselves able to promote this aggregate pattern and increase it during plant development.

  7. Analyses and simulation to spatial pattern of land utilization in Guangzhu City

    Science.gov (United States)

    Zhang, Xin-chang; Zhang, Wen-jiang; Ma, Kun

    2006-10-01

    Based on Landsat TM remote sensing images in 1990 and 2000, we analyses the temporal and spatial pattern Characters of land use in the 1990s in Guangzhou city. We also simulate the scenarios of land-use pattern in 2010 by integrating the Markov process into cellular automata model. The results show that the area of constructions was rapid increasing during the last ten years of the 20th century, at the same time the arable land, woodland and unused land areas were decreasing, the orchard and water areas were rarely changed; In the first ten years of 21st century, land use pattern keep the change trend in the 1990s, land of constructions continue rapid increasing; arable land and unused land areas continue rapid decreasing; woodland, orchard and water areas keep steadily. Research shows that the extent of urban area has increased exponentially in Guangzhou city, no evidences show that the arable land decreasing rate will slow down in the near future. So, it is necessary to enhance the control functions of land use planning and take actives measures to protect arable land.

  8. TouchTokens: Guiding Touch Patterns with Passive Tokens

    OpenAIRE

    Morales Gonzalez , Rafael; Appert , Caroline; Bailly , Gilles; Pietriga , Emmanuel

    2016-01-01

    International audience; TouchTokens make it possible to easily build interfaces that combine tangible and gestural input using passive tokens and a regular multi-touch surface. The tokens constrain users' grasp, and thus, the relative spatial configuration of fingers on the surface, theoretically making it possible to design algorithms that can recognize the resulting touch patterns. We performed a formative user study to collect and analyze touch patterns with tokens of varying shape and siz...

  9. Spatial and temporal patterns of land surface fluxes from remotely sensed surface temperatures within an uncertainty modelling framework

    Directory of Open Access Journals (Sweden)

    M. F. McCabe

    2005-01-01

    Full Text Available Characterising the development of evapotranspiration through time is a difficult task, particularly when utilising remote sensing data, because retrieved information is often spatially dense, but temporally sparse. Techniques to expand these essentially instantaneous measures are not only limited, they are restricted by the general paucity of information describing the spatial distribution and temporal evolution of evaporative patterns. In a novel approach, temporal changes in land surface temperatures, derived from NOAA-AVHRR imagery and a generalised split-window algorithm, are used as a calibration variable in a simple land surface scheme (TOPUP and combined within the Generalised Likelihood Uncertainty Estimation (GLUE methodology to provide estimates of areal evapotranspiration at the pixel scale. Such an approach offers an innovative means of transcending the patch or landscape scale of SVAT type models, to spatially distributed estimates of model output. The resulting spatial and temporal patterns of land surface fluxes and surface resistance are used to more fully understand the hydro-ecological trends observed across a study catchment in eastern Australia. The modelling approach is assessed by comparing predicted cumulative evapotranspiration values with surface fluxes determined from Bowen ratio systems and using auxiliary information such as in-situ soil moisture measurements and depth to groundwater to corroborate observed responses.

  10. Research on the spatial agglomeration of urban tourism in Yangtze River delta

    Directory of Open Access Journals (Sweden)

    LIU Jinwei

    2015-04-01

    Full Text Available This article on the basis of spatial autocorrelation theory analyzed the interaction spatial relationship and pattern, utilizing Geo da software made quantitative research on the tourism spatial autocorrelation level of 16 cities in Yangtze River delta The results indicate that Domestic tourism and the inbound tourism had a low Moran′s value and field to get through the statistic significant test, showing the non-significant global spatial autocorrelation The progress of tourism without notable gather and differentiation trait The level of tourism emerging random distribution pattern due to the standard of city The cities quadrant chart reflect the congruent relationship between urban hierarchy and tourism performance, Shanghai, Hangzhou, Nanjing and Suzhou are the high value center, along with surrounding cities which obtain low value make up the random spatial situation, the towns encircle the high-value urban are the service and radiation zone of the upper city; the level of the spatial autocorrelation among cities decline from 2005 to 2010, tourism entering the network integration developing stage.

  11. A spatial analysis of patterns of growth and concentration of population based on homogeneous population censuses: Spain (1877-2001

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    Xavier Franch Auladell

    2013-01-01

    Full Text Available This work constitutes a contribution to the analysis of long term patterns of population concentration applied to the case of Spain. The proposed methodology is based on the homogenisation of both data and administrative units which takes the municipal structure of the 2001 census as its base reference. This work seeks to show how applying spatial analysis techniques to this type of homogeneous data series allows us to make more detailed studies of population patterns within a given territory. The most important conclusions that we reached was that, in Spain, sustained population growth has followed a spatial pattern that has become increasingly consolidated over time. The tendencies observed have produced an uneven distribution of population within the national territory marked by the existence of a series of well-defined, and often very localised, areas that spread beyond the limits of the official administrative boundaries.

  12. Two different gene loci related to the spatial patterning of brain ventricle in vertebrate

    Institute of Scientific and Technical Information of China (English)

    LUO Minna; LI Bingxia; TONG Ying; ZHAO Shufang; LUO Chen

    2007-01-01

    Observations on living embryonic brains and the microstructure of brain ventricle of goldfish revealed that there are two brain ventricle phenotypes in gynogenetic haploid embryos. One phenotype is as normal as that of the control inbreeding diploid embryos,which has normal differentiated forebrain, midbrain and hindbrain. Another phenotype is obviously abnormal, the brain patterning is irregular, and no distinct brain ventricle can be observed. The ratio of haploid embryos with normal brain pattern to that with abnormal brain pattern is 1:3. This ratio indicates that there are two gene loci involved in the spatial patterning of the brain ventricle. Since the possibility that deleterious recessive mutant alleles exist on both of the two gene loci had been excluded in this experiment, the phenotype represented the expressional state rather than the genotype of these two genes. Therefore, the ratio of 1∶ 3 suggests that the expressing probability for each copy of the two genes is 50%, and the regulatory mechanism of the expression is based on two sets of chromosomes, controlled by the rule of the diploid-dependent regulatory mechanism.

  13. A deep convolutional neural network to analyze position averaged convergent beam electron diffraction patterns.

    Science.gov (United States)

    Xu, W; LeBeau, J M

    2018-05-01

    We establish a series of deep convolutional neural networks to automatically analyze position averaged convergent beam electron diffraction patterns. The networks first calibrate the zero-order disk size, center position, and rotation without the need for pretreating the data. With the aligned data, additional networks then measure the sample thickness and tilt. The performance of the network is explored as a function of a variety of variables including thickness, tilt, and dose. A methodology to explore the response of the neural network to various pattern features is also presented. Processing patterns at a rate of  ∼ 0.1 s/pattern, the network is shown to be orders of magnitude faster than a brute force method while maintaining accuracy. The approach is thus suitable for automatically processing big, 4D STEM data. We also discuss the generality of the method to other materials/orientations as well as a hybrid approach that combines the features of the neural network with least squares fitting for even more robust analysis. The source code is available at https://github.com/subangstrom/DeepDiffraction. Copyright © 2018 Elsevier B.V. All rights reserved.

  14. Demograficheskie izmenenija v Germanii i novaja territorial'naja struktura starenija [Demographic change in Germany and reversal of spatial ageing patterns

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    Swiaczny Frank

    2010-01-01

    Full Text Available The paper presents the result of a spatial analysis considering the effect of demographic ageing and ageing-in-place processes in Germany according to spatially differentiated ageing patterns among urban, sub-urban and rural counties up to 2025. As to the latest official population forecast counties of urban core regions will undergo a slower ageing process than other types of counties, resulting in a reversal of ageing patterns. Urban core areas in this analysis will gain demographically from their net migration surplus while suburban housing locations of the past will be no longer able to attract enough young migrants to compensate for their now rapidly ageing baby boomer generation. The process presented is typical for the fate of (suburban housing areas with homogenous populations under conditions of ageing and shrinking if spatial mobility in ageing population groups is declining.

  15. A Five Species Cyclically Dominant Evolutionary Game with Fixed Direction: A New Way to Produce Self-Organized Spatial Patterns

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    Yibin Kang

    2016-08-01

    Full Text Available Cyclically dominant systems are hot issues in academia, and they play an important role in explaining biodiversity in Nature. In this paper, we construct a five-strategy cyclically dominant system. Each individual in our system changes its strategy along a fixed direction. The dominant strategy can promote a change in the dominated strategy, and the dominated strategy can block a change in the dominant strategy. We use mean-field theory and cellular automaton simulation to discuss the evolving characters of the system. In the cellular automaton simulation, we find the emergence of spiral waves on spatial patterns without a migration rate, which suggests a new way to produce self-organized spatial patterns.

  16. Recent trends and patterns of Nigeria's industrial development ...

    African Journals Online (AJOL)

    This paper analyzes recent trend and the spatial patterns of manufacturing in Nigeria. In particular, the paper shows that industrial development in the country involved considerable craft works firms in the early stages and grew progressively in number over the years to large-scale manufacturing. The contribution of ...

  17. Temporal and Spatial Independent Component Analysis for fMRI Data Sets Embedded in the AnalyzeFMRI R Package

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    Pierre Lafaye de Micheaux

    2011-10-01

    Full Text Available For statistical analysis of functional magnetic resonance imaging (fMRI data sets, we propose a data-driven approach based on independent component analysis (ICA implemented in a new version of the AnalyzeFMRI R package. For fMRI data sets, spatial dimension being much greater than temporal dimension, spatial ICA is the computationally tractable approach generally proposed. However, for some neuroscientific applications, temporal independence of source signals can be assumed and temporal ICA becomes then an attractive exploratory technique. In this work, we use a classical linear algebra result ensuring the tractability of temporal ICA. We report several experiments on synthetic data and real MRI data sets that demonstrate the potential interest of our R package.

  18. Spatial patterns of Bovine Corona Virus and Bovine Respiratory Syncytial Virus in the Swedish beef cattle population

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    Björkman Camilla

    2010-05-01

    Full Text Available Abstract Background Both bovine coronavirus (BCV and bovine respiratory syncytial virus (BRSV infections are currently wide-spread in the Swedish dairy cattle population. Surveys of antibody levels in bulk tank milk have shown very high nationwide prevalences of both BCV and BRSV, with large variations between regions. In the Swedish beef cattle population however, no investigations have yet been performed regarding the prevalence and geographical distribution of BCV and BRSV. A cross-sectional serological survey for BCV and BRSV was carried out in Swedish beef cattle to explore any geographical patterns of these infections. Methods Blood samples were collected from 2,763 animals located in 2,137 herds and analyzed for presence of antibodies to BCV and BRSV. Moran's I was calculated to assess spatial autocorrelation, and identification of geographical cluster was performed using spatial scan statistics. Results Animals detected positive to BCV or BRSV were predominately located in the central-western and some southern parts of Sweden. Moran's I indicated global spatial autocorrelation. BCV and BRSV appeared to be spatially related: two areas in southern Sweden (Skaraborg and Skåne had a significantly higher prevalence of BCV (72.5 and 65.5% respectively; almost the same two areas were identified as being high-prevalence clusters for BRSV (69.2 and 66.8% respectively. An area in south-east Sweden (Kronoberg-Blekinge had lower prevalences for both infections than expected (23.8 and 20.7% for BCV and BRSV respectively. Another area in middle-west Sweden (Värmland-Dalarna had also a lower prevalence for BRSV (7.9%. Areas with beef herd density > 10 per 100 km2 were found to be at significantly higher risk of being part of high-prevalence clusters. Conclusion These results form a basis for further investigations of between-herds dynamics and risk factors for these infections in order to design effective control strategies.

  19. Ecomorphological patterns of the fish assemblage in a tropical floodplain: effects of trophic, spatial and phylogenetic structures

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    Edson Fontes Oliveira

    Full Text Available Ecomorphological patterns of the fish assemblage from the upper Paraná River floodplain, Brazil, were described and evaluated according to trophic (guilds, spatial (habitats and phylogenetic (taxonomic distances structures. The samples were obtained through the Long Term Research Project (LTER-CNPq/UEM/NUPELIA in August and October 2001. Thirty-five species were analyzed from thirty-one morphological variables. Strong significant correlations (Mantel test between morphology and trophic guilds and between morphology and taxonomy were found, while morphology and habitat revealed a weak correlation. However, the partial Mantel test showed that the correlations between morphology and trophic guilds persist even when the effect of taxonomy is discounted. The ecomorphological pattern shown by the Principal Component Analysis separated species according to locomotion structures used in feeding. At one extreme there are the piscivores and insectivores that exploit lentic habitats and have compressed bodies and well developed anal fins, while at the other there are detritivores and invertivores that exploit lotic and semi-lotic habitats and have depressed bodies and well developed pectoral, pelvic and caudal fins. Canonical Discriminant Analysis using ecomorphological variables successfully predicted 94.5% of the trophic guild ecomorphotypes, but only 57.1% of the habitat ecomorphotypes. These data indicate that the fish assemblage of the upper Paraná River floodplain is structured ecomorphologically mainly according to trophic structure rather than habitat.

  20. International research to monitor sustainable forest spatial patterns: proceedings of the 2005 IUFRO World Congress symposium

    Science.gov (United States)

    Kurt Riitters; Christine Estreguil

    2007-01-01

    Presentations from the symposium "International Research to Monitor Sustainable Forest Spatial Patterns," which was organized as part of the International Union of Forest Research Organizations (IUFRO) World Congress in August 2005, are summarized in this report. The overall theme of the World Congress was "Forests in the Balance: Linking Tradition and...

  1. Spatial patterns of stream temperatures and electric conductivity in a mesoscale catchment

    Science.gov (United States)

    Lieder, Ernestine; Weiler, Markus; Blume, Theresa

    2017-04-01

    Stream temperature and electric conductivity (EC) are both relatively easily measured and can provide valuable information on runoff generation processes and catchment storage.This study investigates the spatial variability of stream temperature and EC in a mesoscale basin. We focus on the mesoscale (sub-catchments and reach scale), and long term (seasonal / annual) stream temperature and EC patterns. Our study basin is the Attert catchment in Luxembourg (288km2), which contains multiple sub-catchments of different geology, topography and land use patterns. We installed 90 stream temperature and EC sensors at sites across the basin in summer 2015. The collected data is complemented by land use and discharge data and an extensive climate data set. Thermal sensitivity was calculated as the slope of daily air temperature-water-temperature regression line and describes the sensitivity of stream temperature to long term environmental change. Amplitude sensitivity was calculated as slope of the daily air and water temperature amplitude regression and describes the short term warming capacity of the stream. We found that groups with similar long term thermal and EC patterns are strongly related to different geological units. The sandstone reaches show the coldest temperatures and lowest annual thermal sensitivity to air temperature. The slate reaches are characterized by comparably low EC and high daily temperature amplitudes and amplitude sensitivity. Furthermore, mean annual temperatures and thermal sensitivities increase exponentially with drainage area, which can be attributed to the accumulation of heat throughout the system. On the reach scale, daily stream temperature fluctuations or sensitivities were strongly influenced by land cover distribution, stream shading and runoff volume. Daily thermal sensitivities were low for headwater streams; peaked for intermediate reaches in the middle of the catchment and then decreased again further downstream with increasing

  2. Assessing patterns of spatial behavior in health studies: their socio-demographic determinants and associations with transportation modes (the RECORD Cohort Study).

    Science.gov (United States)

    Perchoux, Camille; Kestens, Yan; Thomas, Frédérique; Van Hulst, Andraea; Thierry, Benoit; Chaix, Basile

    2014-10-01

    Prior epidemiological studies have mainly focused on local residential neighborhoods to assess environmental exposures. However, individual spatial behavior may modify residential neighborhood influences, with weaker health effects expected for mobile populations. By examining individual patterns of daily mobility and associated socio-demographic profiles and transportation modes, this article seeks to develop innovative methods to account for daily mobility in health studies. We used data from the RECORD Cohort Study collected in 2011-2012 in the Paris metropolitan area, France. A sample of 2062 individuals was investigated. Participants' perceived residential neighborhood boundaries and regular activity locations were geocoded using the VERITAS application. Twenty-four indicators were created to qualify individual space-time patterns, using spatial analysis methods and a geographic information system. Three domains of indicators were considered: lifestyle indicators, indicators related to the geometry of the activity space, and indicators related to the importance of the residential neighborhood in the overall activity space. Principal component analysis was used to identify main dimensions of spatial behavior. Multilevel linear regression was used to determine which individual characteristics were associated with each spatial behavior dimension. The factor analysis generated five dimensions of spatial behavior: importance of the residential neighborhood in the activity space, volume of activities, and size, eccentricity, and specialization of the activity space. Age, socioeconomic status, and location of the household in the region were the main predictors of daily mobility patterns. Activity spaces of small sizes centered on the residential neighborhood and implying a large volume of activities were associated with walking and/or biking as a transportation mode. Examination of patterns of spatial behavior by individual socio-demographic characteristics and in

  3. Spatial and Temporal Microbial Patterns in a Tropical Macrotidal Estuary Subject to Urbanization

    Directory of Open Access Journals (Sweden)

    Mirjam Kaestli

    2017-07-01

    Full Text Available Darwin Harbour in northern Australia is an estuary in the wet-dry tropics subject to increasing urbanization with localized water quality degradation due to increased nutrient loads from urban runoff and treated sewage effluent. Tropical estuaries are poorly studied compared to temperate systems and little is known about the microbial community-level response to nutrients. We aimed to examine the spatial and temporal patterns of the bacterial community and its association with abiotic factors. Since Darwin Harbour is macrotidal with strong seasonal patterns and mixing, we sought to determine if a human impact signal was discernible in the microbiota despite the strong hydrodynamic forces. Adopting a single impact–double reference design, we investigated the bacterial community using next-generation sequencing of the 16S rRNA gene from water and sediment from reference creeks and creeks affected by effluent and urban runoff. Samples were collected over two years during neap and spring tides, in the dry and wet seasons. Temporal drivers, namely seasons and tides had the strongest relationship to the water microbiota, reflecting the macrotidal nature of the estuary and its location in the wet-dry tropics. The neap-tide water microbiota provided the clearest spatial resolution while the sediment microbiota reflected current and past water conditions. Differences in patterns of the microbiota between different parts of the harbor reflected the harbor's complex hydrodynamics and bathymetry. Despite these variations, a microbial signature was discernible relating to specific effluent sources and urban runoff, and the composite of nutrient levels accounted for the major part of the explained variation in the microbiota followed by salinity. Our results confirm an overall good water quality but they also reflect the extent of some hypereutrophic areas. Our results show that the microbiota is a sensitive indicator to assess ecosystem health even in this

  4. Spatial patterns of antimicrobial resistance genes in a cross-sectional sample of pig farms with indoor non-organic production of finishers

    DEFF Research Database (Denmark)

    Birkegård, Anna Camilla; Ersbøll, Annette Kjær; Hisham Beshara Halasa, Tariq

    2017-01-01

    Antimicrobial resistance (AMR) in pig populations is a public health concern. There is a lack of information of spatial distributions of AMR genes in pig populations at large scales. The objective of the study was to describe the spatial pattern of AMR genes in faecal samples from pig farms...... spatial clusters were identified for ermB, ermF, sulII and tet(W). The broad spatial trends in AMR resistance evident in the risk maps were in agreement with the results of the cluster analysis. However, they also showed that there were only small scale spatial differences in the gene levels. We conclude...

  5. Spatial patterns with memory: tree regeneration after stand-replacing disturbance in Picea abies mountain forests

    Czech Academy of Sciences Publication Activity Database

    Wild, Jan; Kopecký, Martin; Svoboda, M.; Zenáhlíková, J.; Edwards-Jonášová, Magda; Herben, Tomáš

    2014-01-01

    Roč. 25, č. 6 (2014), s. 1327-1340 ISSN 1100-9233 R&D Projects: GA ČR GAP504/10/0843; GA MŽP SP/2D2/111/08 Institutional support: RVO:67985939 ; RVO:67179843 Keywords : bark beetle * spatial pattern * mountain spruce forest Subject RIV: EF - Botanics; EH - Ecology, Behaviour (UEK-B) Impact factor: 3.709, year: 2014

  6. Mixed-severity fire fosters heterogeneous spatial patterns of conifer regeneration in a dry conifer forest

    Science.gov (United States)

    Sparkle L. Malone; Paula J. Fornwalt; Mike A. Battaglia; Marin E. Chambers; Jose M. Iniguez; Carolyn H. Sieg

    2018-01-01

    We examined spatial patterns of post-fire regenerating conifers in a Colorado, USA, dry conifer forest 11-12 years following the reintroduction of mixed-severity fire. We mapped and measured all post-fire regenerating conifers, as well as all other post-fire regenerating trees and all residual (i.e., surviving) trees, in three 4-ha plots following the 2002 Hayman Fire...

  7. Imbalance in Spatial Accessibility to Primary and Secondary Schools in China: Guidance for Education Sustainability

    Directory of Open Access Journals (Sweden)

    Yuan Gao

    2016-11-01

    Full Text Available Compulsory education is an important aspect of the societal development. Meanwhile, education equality safeguards the effectiveness of education systems and is an important part of social equality. This study analyzes the inequality of compulsory education from the perspective of imbalanced spatial distribution. Unlike previous studies that have measured the spatial distribution of education simply based on the spatial position of primary and secondary schools, we explore spatial accessibility based on the shortest travel distance from residents to schools, and then analyze the inequality of compulsory education through the distribution of spatial accessibility. We use 2873 Chinese counties as statistical units, and perform a statistical and graphical analysis of their spatial accessibility using the Theil index and spatial autocorrelation analyses. To analyze the differences in the spatial accessibility distribution on the national and regional levels, we use three partitioned modes: the terrain partitioned mode, the economic development partitioned mode, and the province-level partitioned mode. We then analyze the spatial agglomeration characteristics and distribution patterns of compulsory education accessibility through global autocorrelation, local autocorrelation, and hot-spot and cold-spot analysis. The results demonstrate an obvious imbalance in the distribution of spatial accessibility to compulsory education at the national level. Accessibility and equality in eastern and central regions are significantly better than those in the western region; both are significantly better in coastal regions than in inland regions; and equality alone is better in the municipalities, such as Shanghai, Tianjin, and Chongqing, than in other provinces and autonomous regions. The spatial pattern analysis shows significant global autocorrelation and obvious clusters. Counties in cold-spot areas (clusters of good spatial accessibility are large in number

  8. Handbook of Spatial Statistics

    CERN Document Server

    Gelfand, Alan E

    2010-01-01

    Offers an introduction detailing the evolution of the field of spatial statistics. This title focuses on the three main branches of spatial statistics: continuous spatial variation (point referenced data); discrete spatial variation, including lattice and areal unit data; and, spatial point patterns.

  9. Associative-memory representations emerge as shared spatial patterns of theta activity spanning the primate temporal cortex.

    Science.gov (United States)

    Nakahara, Kiyoshi; Adachi, Ken; Kawasaki, Keisuke; Matsuo, Takeshi; Sawahata, Hirohito; Majima, Kei; Takeda, Masaki; Sugiyama, Sayaka; Nakata, Ryota; Iijima, Atsuhiko; Tanigawa, Hisashi; Suzuki, Takafumi; Kamitani, Yukiyasu; Hasegawa, Isao

    2016-06-10

    Highly localized neuronal spikes in primate temporal cortex can encode associative memory; however, whether memory formation involves area-wide reorganization of ensemble activity, which often accompanies rhythmicity, or just local microcircuit-level plasticity, remains elusive. Using high-density electrocorticography, we capture local-field potentials spanning the monkey temporal lobes, and show that the visual pair-association (PA) memory is encoded in spatial patterns of theta activity in areas TE, 36, and, partially, in the parahippocampal cortex, but not in the entorhinal cortex. The theta patterns elicited by learned paired associates are distinct between pairs, but similar within pairs. This pattern similarity, emerging through novel PA learning, allows a machine-learning decoder trained on theta patterns elicited by a particular visual item to correctly predict the identity of those elicited by its paired associate. Our results suggest that the formation and sharing of widespread cortical theta patterns via learning-induced reorganization are involved in the mechanisms of associative memory representation.

  10. GIS based spatial pattern analysis: Children with Hepatitis A in Turkey.

    Science.gov (United States)

    Dogru, Ahmet Ozgur; David, Ruusa Magano; Ulugtekin, Necla; Goksel, Cigdem; Seker, Dursun Zafer; Sözen, Seval

    2017-07-01

    This study aimed to provide an insight into the geographic distribution of Hepatitis A incidence considering their temporal distribution, spatial patterns, hot spots and clusters identification in three different age-group (0-4, 5-9 and 10-14) in Turkey. Province based tabular data, including monthly numbers of Hepatitis A cases in children, and the populations from 2001 to 2011 were used as the basic input of the study. Time series maps were created using Geographic Information Systems (GIS) to introduce the temporal changes in the morbidity rates of Hepatitis A. The spatial variation of Hepatitis A was measured using Moran's I at the global level and the local indicators of spatial associations (LISAs) Moran's I and Getis-Ord G i *(d) in order to identify influential locations through clusters and hot spots detection of Hepatitis A cases. The morbidity rates in children under the age of 5 were found significantly lower than the other age-groups, whereas the age-group 5-9 revealed the highest morbidity rates in the study area. The morbidity of Hepatitis A was detected very high for the years 2001, and 2005-2007. The identification of the highly vulnerable provinces was conducted using local Moran's I and local Getis-Ord G i *(d). The majority of clusters and hot spots were detected to be agglomerated in the Eastern Mediterranean and South-Eastern Anatolian Regions and Ceyhan, Asi and Southeast part of Firat-Dicle river basins in Turkey. Copyright © 2017 Elsevier Inc. All rights reserved.

  11. Comparison of different statistical modelling approaches for deriving spatial air temperature patterns in an urban environment

    Science.gov (United States)

    Straub, Annette; Beck, Christoph; Breitner, Susanne; Cyrys, Josef; Geruschkat, Uta; Jacobeit, Jucundus; Kühlbach, Benjamin; Kusch, Thomas; Richter, Katja; Schneider, Alexandra; Umminger, Robin; Wolf, Kathrin

    2017-04-01

    Frequently spatial variations of air temperature of considerable magnitude occur within urban areas. They correspond to varying land use/land cover characteristics and vary with season, time of day and synoptic conditions. These temperature differences have an impact on human health and comfort directly by inducing thermal stress as well as indirectly by means of affecting air quality. Therefore, knowledge of the spatial patterns of air temperature in cities and the factors causing them is of great importance, e.g. for urban planners. A multitude of studies have shown statistical modelling to be a suitable tool for generating spatial air temperature patterns. This contribution presents a comparison of different statistical modelling approaches for deriving spatial air temperature patterns in the urban environment of Augsburg, Southern Germany. In Augsburg there exists a measurement network for air temperature and humidity currently comprising 48 stations in the city and its rural surroundings (corporately operated by the Institute of Epidemiology II, Helmholtz Zentrum München, German Research Center for Environmental Health and the Institute of Geography, University of Augsburg). Using different datasets for land surface characteristics (Open Street Map, Urban Atlas) area percentages of different types of land cover were calculated for quadratic buffer zones of different size (25, 50, 100, 250, 500 m) around the stations as well for source regions of advective air flow and used as predictors together with additional variables such as sky view factor, ground level and distance from the city centre. Multiple Linear Regression and Random Forest models for different situations taking into account season, time of day and weather condition were applied utilizing selected subsets of these predictors in order to model spatial distributions of mean hourly and daily air temperature deviations from a rural reference station. Furthermore, the different model setups were

  12. Mixed-Severity Fire Fosters Heterogeneous Spatial Patterns of Conifer Regeneration in a Dry Conifer Forest

    Directory of Open Access Journals (Sweden)

    Sparkle L. Malone

    2018-01-01

    Full Text Available We examined spatial patterns of post-fire regenerating conifers in a Colorado, USA, dry conifer forest 11–12 years following the reintroduction of mixed-severity fire. We mapped and measured all post-fire regenerating conifers, as well as all other post-fire regenerating trees and all residual (i.e., surviving trees, in three 4-ha plots following the 2002 Hayman Fire. Residual tree density ranged from 167 to 197 trees ha−1 (TPH, and these trees were clustered at distances up to 30 m. Post-fire regenerating conifers, which ranged in density from 241 to 1036 TPH, were also clustered at distances up to at least 30 m. Moreover, residual tree locations drove post-fire regenerating conifer locations, with the two showing a pattern of repulsion. Topography and post-fire sprouting tree species locations further drove post-fire conifer regeneration locations. These results provide a foundation for anticipating how the reintroduction of mixed-severity fire may affect long-term forest structure, and also yield insights into how historical mixed-severity fire may have regulated the spatially heterogeneous conditions commonly described for pre-settlement dry conifer forests of Colorado and elsewhere.

  13. Relationship between the spatial distribution of SMS messages reporting needs and building damage in 2010 Haiti disaster

    Directory of Open Access Journals (Sweden)

    C. Corbane

    2012-02-01

    Full Text Available Just 4 days after the M = 7.1 earthquake on 12 January 2010, Haitians could send SMS messages about their location and urgent needs through the on-line mapping platform Ushahidi. This real-time crowdsourcing of crisis information provided direct support to key humanitarian resources on the ground, including Search and Rescue teams. In addition to its use as a knowledge base for rescue operations and aid provision, the spatial distribution of geolocated SMS messages may represent an early indicator on the spatial distribution and on the intensity of building damage.

    This work explores the relationship between the spatial patterns of SMS messages and building damage. The latter is derived from the detailed damage assessment of individual buildings interpreted in post-earthquake airborne photos. The interaction between SMS messages and building damage is studied by analyzing the spatial structure of the corresponding bivariate patterns.

    The analysis is performed through the implementation of cross Ripley's K-function which is suitable for characterizing the spatial structure of a bivariate pattern, and more precisely the spatial relationship between two types of point sets located in the same study area.

    The results show a strong attraction between the patterns exhibited by SMS messages and building damages. The interactions identified between the two patterns suggest that the geolocated SMS can be used as early indicators of the spatial distribution of building damage pattern. Accordingly, a statistical model has been developed to map the distribution of building damage from the geolocated SMS pattern.

    The study presented in this paper is the first attempt to derive quantitative estimates on the spatial patterns of novel crowdsourced information and correlate these to established methods in damage assessment using remote sensing data. The consequences of the study findings for rapid damage detection in

  14. Using a Cellular Automata-Markov Model to Reconstruct Spatial Land-Use Patterns in Zhenlai County, Northeast China

    Directory of Open Access Journals (Sweden)

    Yuanyuan Yang

    2015-05-01

    Full Text Available Decadal to centennial land use and land cover change has been consistently singled out as a key element and an important driver of global environmental change, playing an essential role in balancing energy use. Understanding long-term human-environment interactions requires historical reconstruction of past land use and land cover changes. Most of the existing historical reconstructions have insufficient spatial and thematic detail and do not consider various land change types. In this context, this paper explored the possibility of using a cellular automata-Markov model in 90 m × 90 m spatial resolution to reconstruct historical land use in the 1930s in Zhenlai County, China. Then the three-map comparison methodology was employed to assess the predictive accuracy of the transition modeling. The model could produce backward projections by analyzing land use changes in recent decades, assuming that the present land use pattern is dynamically dependent on the historical one. The reconstruction results indicated that in the 1930s most of the study area was occupied by grasslands, followed by wetlands and arable land, while other land categories occupied relatively small areas. Analysis of the three-map comparison illustrated that the major differences among the three maps have less to do with the simulation model and more to do with the inconsistencies among the land categories during the study period. Different information provided by topographic maps and remote sensing images must be recognized.

  15. Spatial-frequency spectrum of patterns changes the visibility of spatial-phase differences

    Science.gov (United States)

    Lawton, T. B.

    1985-01-01

    It is shown that spatial-frequency components over a 4-octave range affected the visibility of spatial-phase differences. Contrast thresholds were measured for discrimination between two (+45- and -45-deg) spatial phases of a sinusoidal test grating added to a background grating. The background could contain one or several sinusoidal components, all in 0-deg phase. Phase differences between the test and the background were visible at lower contrasts when test and background frequencies were harmonically related than when they were not, when test and background frequencies were within 1 octave than when they were farther apart, when the fundamental frequency of the background was low than when it was high, and for some discriminations more than for others, after practice. The visibility of phase differences was not affected by additional components in the background if the fundamental and difference frequencies of the background remained unchanged. Observers' reports of their strategies gave information about the types of attentive processing that were used to discriminate phase differences. Attentive processing facilitated phase discrimination for multifrequency gratings spanning a much wider range of spatial frequencies than would be possible by using only local preattentive processing. These results were consistent with the visibility of phase differences being processed by some combination of even- and odd-symmetric simple cells tuned to a wide range of different spatial frequencies.

  16. Spatial, Temporal and Spatio-Temporal Patterns of Maritime Piracy.

    Science.gov (United States)

    Marchione, Elio; Johnson, Shane D

    2013-11-01

    To examine patterns in the timing and location of incidents of maritime piracy to see whether, like many urban crimes, attacks cluster in space and time. Data for all incidents of maritime piracy worldwide recorded by the National Geospatial Intelligence Agency are analyzed using time-series models and methods originally developed to detect disease contagion. At the macro level, analyses suggest that incidents of pirate attacks are concentrated in five subregions of the earth's oceans and that the time series for these different subregions differ. At the micro level, analyses suggest that for the last 16 years (or more), pirate attacks appear to cluster in space and time suggesting that patterns are not static but are also not random. Much like other types of crime, pirate attacks cluster in space, and following an attack at one location the risk of others at the same location or nearby is temporarily elevated. The identification of such regularities has implications for the understanding of maritime piracy and for predicting the future locations of attacks.

  17. Abundant Topological Outliers in Social Media Data and Their Effect on Spatial Analysis.

    Science.gov (United States)

    Westerholt, Rene; Steiger, Enrico; Resch, Bernd; Zipf, Alexander

    2016-01-01

    Twitter and related social media feeds have become valuable data sources to many fields of research. Numerous researchers have thereby used social media posts for spatial analysis, since many of them contain explicit geographic locations. However, despite its widespread use within applied research, a thorough understanding of the underlying spatial characteristics of these data is still lacking. In this paper, we investigate how topological outliers influence the outcomes of spatial analyses of social media data. These outliers appear when different users contribute heterogeneous information about different phenomena simultaneously from similar locations. As a consequence, various messages representing different spatial phenomena are captured closely to each other, and are at risk to be falsely related in a spatial analysis. Our results reveal indications for corresponding spurious effects when analyzing Twitter data. Further, we show how the outliers distort the range of outcomes of spatial analysis methods. This has significant influence on the power of spatial inferential techniques, and, more generally, on the validity and interpretability of spatial analysis results. We further investigate how the issues caused by topological outliers are composed in detail. We unveil that multiple disturbing effects are acting simultaneously and that these are related to the geographic scales of the involved overlapping patterns. Our results show that at some scale configurations, the disturbances added through overlap are more severe than at others. Further, their behavior turns into a volatile and almost chaotic fluctuation when the scales of the involved patterns become too different. Overall, our results highlight the critical importance of thoroughly considering the specific characteristics of social media data when analyzing them spatially.

  18. Impacts from Land Use Pattern on Spatial Distribution of Cultivated Soil Heavy Metal Pollution in Typical Rural-Urban Fringe of Northeast China.

    Science.gov (United States)

    Li, Wenbo; Wang, Dongyan; Wang, Qing; Liu, Shuhan; Zhu, Yuanli; Wu, Wenjun

    2017-03-22

    Under rapid urban sprawl in Northeast China, land conversions are not only encroaching on the quantity of cultivated lands, but also posing a great threat to black soil conservation and food security. This study's aim is to explore the spatial relationship between comprehensive cultivated soil heavy metal pollution and peri-urban land use patterns in the black soil region. We applied spatial lag regression to analyze the relationship between PLI (pollution load index) and influencing factors of land use by taking suburban cultivated land of Changchun Kuancheng District as an empirical case. The results indicate the following: (1) Similar spatial distribution characteristics are detected between Pb, Cu, and Zn, between Cr and Ni, and between Hg and Cd. The Yitong River catchment in the central region, and the residential community of Lanjia County in the west, are the main hotspots for eight heavy metals and PLI. Beihu Wetland Park, with a larger-area distribution of ecological land in the southeast, has low level for both heavy metal concentrations and PLI values. Spatial distribution characteristics of cultivated heavy metals are related to types of surrounding land use and industry; (2) Spatial lag regression has a better fit for PLI than the ordinary least squares regression. The regression results indicate the inverse relationship between heavy metal pollution degree and distance from long-standing residential land and surface water. Following rapid urban land expansion and a longer accumulation period, residential land sprawl is going to threaten cultivated land with heavy metal pollution in the suburban black soil region, and cultivated land irrigated with urban river water in the suburbs will have a higher tendency for heavy metal pollution.

  19. Impacts from Land Use Pattern on Spatial Distribution of Cultivated Soil Heavy Metal Pollution in Typical Rural-Urban Fringe of Northeast China

    Science.gov (United States)

    Li, Wenbo; Wang, Dongyan; Wang, Qing; Liu, Shuhan; Zhu, Yuanli; Wu, Wenjun

    2017-01-01

    Under rapid urban sprawl in Northeast China, land conversions are not only encroaching on the quantity of cultivated lands, but also posing a great threat to black soil conservation and food security. This study’s aim is to explore the spatial relationship between comprehensive cultivated soil heavy metal pollution and peri-urban land use patterns in the black soil region. We applied spatial lag regression to analyze the relationship between PLI (pollution load index) and influencing factors of land use by taking suburban cultivated land of Changchun Kuancheng District as an empirical case. The results indicate the following: (1) Similar spatial distribution characteristics are detected between Pb, Cu, and Zn, between Cr and Ni, and between Hg and Cd. The Yitong River catchment in the central region, and the residential community of Lanjia County in the west, are the main hotspots for eight heavy metals and PLI. Beihu Wetland Park, with a larger-area distribution of ecological land in the southeast, has low level for both heavy metal concentrations and PLI values. Spatial distribution characteristics of cultivated heavy metals are related to types of surrounding land use and industry; (2) Spatial lag regression has a better fit for PLI than the ordinary least squares regression. The regression results indicate the inverse relationship between heavy metal pollution degree and distance from long-standing residential land and surface water. Following rapid urban land expansion and a longer accumulation period, residential land sprawl is going to threaten cultivated land with heavy metal pollution in the suburban black soil region, and cultivated land irrigated with urban river water in the suburbs will have a higher tendency for heavy metal pollution. PMID:28327541

  20. a Three-Step Spatial-Temporal Clustering Method for Human Activity Pattern Analysis

    Science.gov (United States)

    Huang, W.; Li, S.; Xu, S.

    2016-06-01

    How people move in cities and what they do in various locations at different times form human activity patterns. Human activity pattern plays a key role in in urban planning, traffic forecasting, public health and safety, emergency response, friend recommendation, and so on. Therefore, scholars from different fields, such as social science, geography, transportation, physics and computer science, have made great efforts in modelling and analysing human activity patterns or human mobility patterns. One of the essential tasks in such studies is to find the locations or places where individuals stay to perform some kind of activities before further activity pattern analysis. In the era of Big Data, the emerging of social media along with wearable devices enables human activity data to be collected more easily and efficiently. Furthermore, the dimension of the accessible human activity data has been extended from two to three (space or space-time) to four dimensions (space, time and semantics). More specifically, not only a location and time that people stay and spend are collected, but also what people "say" for in a location at a time can be obtained. The characteristics of these datasets shed new light on the analysis of human mobility, where some of new methodologies should be accordingly developed to handle them. Traditional methods such as neural networks, statistics and clustering have been applied to study human activity patterns using geosocial media data. Among them, clustering methods have been widely used to analyse spatiotemporal patterns. However, to our best knowledge, few of clustering algorithms are specifically developed for handling the datasets that contain spatial, temporal and semantic aspects all together. In this work, we propose a three-step human activity clustering method based on space, time and semantics to fill this gap. One-year Twitter data, posted in Toronto, Canada, is used to test the clustering-based method. The results show that the

  1. [Spatial and temporal clustering characteristics of typhoid and paratyphoid fever and its change pattern in 3 provinces in southwestern China, 2001-2012].

    Science.gov (United States)

    Wang, L X; Yang, B; Yan, M Y; Tang, Y Q; Liu, Z C; Wang, R Q; Li, S; Ma, L; Kan, B

    2017-11-10

    Objective: To analyze the spatial and temporal clustering characteristics of typhoid and paratyphoid fever and its change pattern in Yunnan, Guizhou and Guangxi provinces in southwestern China in recent years. Methods: The incidence data of typhoid and paratyphoid fever cases at county level in 3 provinces during 2001-2012 were collected from China Information System for Diseases Control and Prevention and analyzed by the methods of descriptive epidemiology and geographic informatics. And the map showing the spatial and temporal clustering characters of typhoid and paratyphoid fever cases in three provinces was drawn. SaTScan statistics was used to identify the typhoid and paratyphoid fever clustering areas of three provinces in each year from 2001 to 2012. Results: During the study period, the reported cases of typhoid and paratyphoid fever declined with year. The reported incidence decreased from 30.15 per 100 000 in 2001 to 10.83 per 100 000 in 2006(annual incidence 21.12 per 100 000); while during 2007-2012, the incidence became stable, ranging from 4.75 per 100 000 to 6.83 per 100 000 (annual incidence 5.73 per 100 000). The seasonal variation of the incidence was consistent in three provinces, with majority of cases occurred in summer and autumn. The spatial and temporal clustering of typhoid and paratyphoid fever was demonstrated by the incidence map. Most high-incidence counties were located in a zonal area extending from Yuxi of Yunnan to Guiyang of Guizhou, but were concentrated in Guilin in Guangxi. Temporal and spatial scan statistics identified the positional shifting of class Ⅰ clustering area from Guizhou to Yunnan. Class Ⅰ clustering area was located around the central and western areas (Zunyi and Anshun) of Guizhou during 2001-2003, and moved to the central area of Yunnan during 2004-2012. Conclusion: Spatial and temporal clustering of typhoid and paratyphoid fever existed in the endemic areas of southwestern China, and the clustering area

  2. Analyzing and Visualizing Precipitation and Soil Moisture in ArcGIS

    Science.gov (United States)

    Yang, Wenli; Pham, Long; Zhao, Peisheng; Kempler, Steve; Wei, Jennifer

    2016-01-01

    Precipitation and soil moisture are among the most important parameters in many land GIS (Geographic Information System) research and applications. These data are available globally from NASA GES DISC (Goddard Earth Science Data and Information Services Center) in GIS-ready format at 10-kilometer spatial resolution and 24-hour or less temporal resolutions. In this presentation, well demonstrate how rainfall and soil moisture data are used in ArcGIS to analyze and visualize spatiotemporal patterns of droughts and their impacts on natural vegetation and agriculture in different parts of the world.

  3. Spatial reflection patterns of iridescent wings of male pierid butterflies: curved scales reflect at a wider angle than flat scales.

    Science.gov (United States)

    Pirih, Primož; Wilts, Bodo D; Stavenga, Doekele G

    2011-10-01

    The males of many pierid butterflies have iridescent wings, which presumably function in intraspecific communication. The iridescence is due to nanostructured ridges of the cover scales. We have studied the iridescence in the males of a few members of Coliadinae, Gonepteryx aspasia, G. cleopatra, G. rhamni, and Colias croceus, and in two members of the Colotis group, Hebomoia glaucippe and Colotis regina. Imaging scatterometry demonstrated that the pigmentary colouration is diffuse whereas the structural colouration creates a directional, line-shaped far-field radiation pattern. Angle-dependent reflectance measurements demonstrated that the directional iridescence distinctly varies among closely related species. The species-dependent scale curvature determines the spatial properties of the wing iridescence. Narrow beam illumination of flat scales results in a narrow far-field iridescence pattern, but curved scales produce broadened patterns. The restricted spatial visibility of iridescence presumably plays a role in intraspecific signalling.

  4. Deciphering principles of morphogenesis from temporal and spatial patterns on the integument

    Science.gov (United States)

    Li, Ang; Lai, Yung-Chih; Figueroa, Seth; Yang, Tian; Widelitz, Randall B; Kobielak, Krzysztof; Nie, Qing; Chuong, Cheng Ming

    2015-01-01

    How tissue patterns form in development and regeneration is a fundamental issue remaining to be fully understood. The integument often forms repetitive units in space (periodic patterning) and time (cyclic renewal), such as feathers and hairs. Integument patterns are visible and experimentally manipulatable, helping us reveal pattern formative processes. Variability is seen in regional phenotypic specificities and temporal cycling at different physiological stages. Here we show some cellular / molecular bases revealed by analyzing integument patterns. 1) Localized cellular activity (proliferation, rearrangement, apoptosis, differentiation) transforms prototypic organ primordia into specific shapes. Combinatorial positioning of different localized activity zones generates diverse and complex organ forms. 2) Competitive equilibrium between activators and inhibitors regulates stem cells through cyclic quiescence and activation. Dynamic interactions between stem cells and their adjacent niche regulate regenerative behavior, modulated by multi-layers of macro-environmental factors (dermis, body hormone status and external environment). Genomics studies may reveal how positional information of localized cellular activity is stored. In vivo skin imaging and lineage tracing unveils new insights into stem cell plasticity. Principles of self-assembly obtained from the integumentary organ model can be applied to help restore damaged patterns during regenerative wound healing and for tissue engineering to rebuild tissues. PMID:25858668

  5. Vegetation Carbon Storage, Spatial Patterns and Response to Altitude in Lancang River Basin, Southwest China

    Directory of Open Access Journals (Sweden)

    Long Chen

    2016-01-01

    Full Text Available Vegetation plays a very important role of carbon (C sinks in the global C cycle. With its complex terrain and diverse vegetation types, the Lancang River Basin (LRB of southwest China has huge C storage capacity. Therefore, understanding the spatial variations and controlling mechanisms of vegetation C storage is important to understand the regional C cycle. In this study, data from a forest inventory and field plots were used to estimate and map vegetation C storage distribution in the LRB, to qualify the quantitative relationships between vegetation C density and altitude at sublot and township scale, and a linear model or polynomial model was used to identify the relationship between C density and altitude at two spatial scales and two statistical scales. The results showed that a total of 300.32 Tg C was stored in the LRB, an important C sink in China. The majority of C storage was contributed by forests, notably oaks. The vegetation C storage exhibited nonlinear variation with latitudinal gradients. Altitude had tremendous influences on spatial patterns of vegetation C storage of three geomorphological types in the LRB. C storage decreased with increasing altitude at both town and sublot scales in the flat river valley (FRV region and the mid-low mountains gorge (MMG region, and first increased then decreased in the alpine gorge (AG region. This revealed that, in southwest China, altitude changes the latitudinal patterns of vegetation C storage; especially in the AG area, C density in the mid-altitude (3100 m area was higher than that of adjacent areas.

  6. Spatial decoupling of facilitation and competition at the origin of gapped vegetation patterns.

    Science.gov (United States)

    Barbier, Nicolas; Couteron, Pierre; Lefever, René; Deblauwe, Vincent; Lejeune, Olivier

    2008-06-01

    Spatially periodic vegetation patterns, forming gaps, bands, labyrinths, or spots, are characteristic of arid and semiarid landscapes. Self-organization models can explain this variety of structures within a unified conceptual framework. All these models are based on the interplay of positive and negative effects of plants on soil water, but they can be divided according to whether they assume the interactions to be mediated by water redistribution through runoff/diffusion or by plants' organs. We carried out a multi-proxy approach of the processes operating in a gapped pattern in southwest Niger dominated by a shrub species. Soil moisture within the root layer was monitored in time and space over one month of the rainy season. Soil water recharge displayed no spatial variation with respect to vegetation cover, but the stock half-life under cover was twice that of bare areas. A kernel of facilitation by the aboveground parts of shrubs was parameterized, and soil water half-life was significantly correlated to the cumulated facilitative effects of shrubs. The kernel range was found to be smaller than the canopy radius (81%). This effect of plants on soil water dynamics, probably through a reduction of evaporation by shading, is shown to be a better explanatory variable than potentially relevant soil and topography parameters. The root systems of five individuals of Combretum micranthum G. Don were excavated. Root density data were used as a proxy to parameterize a kernel function of interplant competition. The range of this kernel was larger than the canopy radius (125%). The facilitation-to-competition range ratio, reflecting the above-to-belowground ratio of plant lateral extent, was smaller than 1 (0.64), a result supporting models assuming that patterning may emerge from an adaptation of plant morphology to aridity and shallow soils by means of an extended lateral root system. Moreover, observed soil water gradients had directions opposite to those assumed by

  7. Quantification of variability in trichome patterns

    Directory of Open Access Journals (Sweden)

    Bettina eGreese

    2014-11-01

    Full Text Available While pattern formation is studied in various areas of biology, little is known about the intrinsic noise leading to variations between individual realizations of the pattern. One prominent example for de novo pattern formation in plants is the patterning of trichomes on Arabidopsis leaves, which involves genetic regulation and cell-to-cell communication. These processes are potentially variable due to , e.g., the abundance of cell components or environmental conditions. To elevate the understanding of the regulatory processes underlying the pattern formation it is crucial to quantitatively analyze the variability in naturally occurring patterns. Here, we review recent approaches towards characterization of noise on trichome initiation. We present methods for the quantification of spatial patterns, which are the basis for data-driven mathematical modeling and enable the analysis of noise from different sources. Besides the insight gained on trichome formation, the examination of observed trichome patterns also shows that highly regulated biological processes can be substantially affected by variability.

  8. Understanding spatial and temporal patterning of astrocyte calcium transients via interactions between network transport and extracellular diffusion

    Science.gov (United States)

    Shtrahman, E.; Maruyama, D.; Olariu, E.; Fink, C. G.; Zochowski, M.

    2017-02-01

    Astrocytes form interconnected networks in the brain and communicate via calcium signaling. We investigate how modes of coupling between astrocytes influence the spatio-temporal patterns of calcium signaling within astrocyte networks and specifically how these network interactions promote coordination within this group of cells. To investigate these complex phenomena, we study reduced cultured networks of astrocytes and neurons. We image the spatial temporal patterns of astrocyte calcium activity and quantify how perturbing the coupling between astrocytes influences astrocyte activity patterns. To gain insight into the pattern formation observed in these cultured networks, we compare the experimentally observed calcium activity patterns to the patterns produced by a reduced computational model, where we represent astrocytes as simple units that integrate input through two mechanisms: gap junction coupling (network transport) and chemical release (extracellular diffusion). We examine the activity patterns in the simulated astrocyte network and their dependence upon these two coupling mechanisms. We find that gap junctions and extracellular chemical release interact in astrocyte networks to modulate the spatiotemporal patterns of their calcium dynamics. We show agreement between the computational and experimental findings, which suggests that the complex global patterns can be understood as a result of simple local coupling mechanisms.

  9. Delineating Spatial Patterns in Human Settlements Using VIIRS Nighttime Light Data: A Watershed-Based Partition Approach

    Directory of Open Access Journals (Sweden)

    Ting Ma

    2018-03-01

    Full Text Available As an informative proxy measure for a range of urbanization and socioeconomic variables, satellite-derived nighttime light data have been widely used to investigate diverse anthropogenic activities in human settlements over time and space from the regional to the national scale. With a higher spatial resolution and fewer over-glow and saturation effects, nighttime light data derived from the Visible Infrared Imaging Radiometer Suite (VIIRS instrument with day/night band (DNB, which is on the Suomi National Polar-Orbiting Partnership satellite (Suomi-NPP, may further improve our understanding of spatiotemporal dynamics and socioeconomic activities, particularly at the local scale. Capturing and identifying spatial patterns in human settlements from VIIRS images, however, is still challenging due to the lack of spatially explicit texture characteristics, which are usually crucial for general image classification methods. In this study, we propose a watershed-based partition approach by combining a second order exponential decay model for the spatial delineation of human settlements with VIIRS-derived nighttime light images. Our method spatially partitions the human settlement into five different types of sub-regions: high, medium-high, medium, medium-low and low lighting areas with different degrees of human activity. This is primarily based on the local coverage of locally maximum radiance signals (watershed-based and the rank and magnitude of the nocturnal radiance signal across the whole region, as well as remotely sensed building density data and social media-derived human activity information. The comparison results for the relationship between sub-regions with various density nighttime brightness levels and human activities, as well as the densities of different types of interest points (POIs, show that our method can distinctly identify various degrees of human activity based on artificial nighttime radiance and ancillary data. Furthermore

  10. Complex temporal and spatial patterns in nonequilibrium processes. Final report, December 1, 1987--November 30, 1992

    Energy Technology Data Exchange (ETDEWEB)

    1992-12-31

    Dynamical systems methods have been used to study bifurcations and pattern formation in nonequilibrium systems. Accomplishments during this period include: information-theoretic methods for analyzing chaos, chemical reactors for studying sustained reaction-diffusion patterns, a reactor exploiting pattern formation to extract short- lived intermediate species, observation of bifurcation from periodic to quasiperiodic rotating chemical spiral patterns, observation of a Turing bifurcation (transition from uniform state to a stationary chemical pattern), method for extracting noise strength in ramped convection, self-similar fractal structure of Zn clusters in electrodeposition, and dynamical instability in crack propagation.

  11. Stochastic Spatial Models in Ecology: A Statistical Physics Approach

    Science.gov (United States)

    Pigolotti, Simone; Cencini, Massimo; Molina, Daniel; Muñoz, Miguel A.

    2017-11-01

    Ecosystems display a complex spatial organization. Ecologists have long tried to characterize them by looking at how different measures of biodiversity change across spatial scales. Ecological neutral theory has provided simple predictions accounting for general empirical patterns in communities of competing species. However, while neutral theory in well-mixed ecosystems is mathematically well understood, spatial models still present several open problems, limiting the quantitative understanding of spatial biodiversity. In this review, we discuss the state of the art in spatial neutral theory. We emphasize the connection between spatial ecological models and the physics of non-equilibrium phase transitions and how concepts developed in statistical physics translate in population dynamics, and vice versa. We focus on non-trivial scaling laws arising at the critical dimension D = 2 of spatial neutral models, and their relevance for biological populations inhabiting two-dimensional environments. We conclude by discussing models incorporating non-neutral effects in the form of spatial and temporal disorder, and analyze how their predictions deviate from those of purely neutral theories.

  12. Spatial reconstruction of single-cell gene expression

    Science.gov (United States)

    Satija, Rahul; Farrell, Jeffrey A.; Gennert, David; Schier, Alexander F.; Regev, Aviv

    2015-01-01

    Spatial localization is a key determinant of cellular fate and behavior, but spatial RNA assays traditionally rely on staining for a limited number of RNA species. In contrast, single-cell RNA-seq allows for deep profiling of cellular gene expression, but established methods separate cells from their native spatial context. Here we present Seurat, a computational strategy to infer cellular localization by integrating single-cell RNA-seq data with in situ RNA patterns. We applied Seurat to spatially map 851 single cells from dissociated zebrafish (Danio rerio) embryos, inferring a transcriptome-wide map of spatial patterning. We confirmed Seurat’s accuracy using several experimental approaches, and used it to identify a set of archetypal expression patterns and spatial markers. Additionally, Seurat correctly localizes rare subpopulations, accurately mapping both spatially restricted and scattered groups. Seurat will be applicable to mapping cellular localization within complex patterned tissues in diverse systems. PMID:25867923

  13. Does sex matter? Temporal and spatial patterns of cougar-human conflict in British Columbia.

    Science.gov (United States)

    Teichman, Kristine J; Cristescu, Bogdan; Nielsen, Scott E

    2013-01-01

    Wildlife-human conflicts occur wherever large carnivores overlap human inhabited areas. Conflict mitigation can be facilitated by understanding long-term dynamics and examining sex-structured conflict patterns. Predicting areas with high probability of conflict helps focus management strategies in order to proactively decrease carnivore mortality. We investigated the importance of cougar (Puma concolor) habitat, human landscape characteristics and the combination of habitat and human features on the temporal and spatial patterns of cougar-human conflicts in British Columbia. Conflicts (n = 1,727; 1978-2007) involved similar numbers of male and female cougars with conflict rate decreasing over the past decade. Conflicts were concentrated within the southern part of the province with the most conflicts per unit area occurring on Vancouver Island. For both sexes, the most supported spatial models for the most recent (1998-2007) conflicts contained both human and habitat variables. Conflicts were more likely to occur close to roads, at intermediate elevations and far from the northern edge of the cougar distribution range in British Columbia. Male cougar conflicts were more likely to occur in areas of intermediate human density. Unlike cougar conflicts in other regions, cattle density was not a significant predictor of conflict location. With human populations expanding, conflicts are expected to increase. Conservation tools, such as the maps predicting conflict hotspots from this study, can help focus management efforts to decrease carnivore-human conflict.

  14. Gelatin-based laser direct-write technique for the precise spatial patterning of cells.

    Science.gov (United States)

    Schiele, Nathan R; Chrisey, Douglas B; Corr, David T

    2011-03-01

    Laser direct-writing provides a method to pattern living cells in vitro, to study various cell-cell interactions, and to build cellular constructs. However, the materials typically used may limit its long-term application. By utilizing gelatin coatings on the print ribbon and growth surface, we developed a new approach for laser cell printing that overcomes the limitations of Matrigel™. Gelatin is free of growth factors and extraneous matrix components that may interfere with cellular processes under investigation. Gelatin-based laser direct-write was able to successfully pattern human dermal fibroblasts with high post-transfer viability (91% ± 3%) and no observed double-strand DNA damage. As seen with atomic force microscopy, gelatin offers a unique benefit in that it is present temporarily to allow cell transfer, but melts and is removed with incubation to reveal the desired application-specific growth surface. This provides unobstructed cellular growth after printing. Monitoring cell location after transfer, we show that melting and removal of gelatin does not affect cellular placement; cells maintained registry within 5.6 ± 2.5 μm to the initial pattern. This study demonstrates the effectiveness of gelatin in laser direct-writing to create spatially precise cell patterns with the potential for applications in tissue engineering, stem cell, and cancer research.

  15. Spatial patterns and temporal changes in atmospheric-mercury deposition for the midwestern USA, 2001–2016

    Science.gov (United States)

    Risch, Martin R.; Kenski, Donna M.

    2018-01-01

    Spatial patterns and temporal changes in atmospheric-mercury (Hg) deposition were examined in a five-state study area in the Midwestern USA where 32% of the stationary sources of anthropogenic Hg emissions in the continental USA were located. An extensive monitoring record for wet and dry Hg deposition was compiled for 2001–2016, including 4666 weekly precipitation samples at 13 sites and 27 annual litterfall-Hg samples at 7 sites. This study is the first to examine these Hg data for the Midwestern USA. The median annual precipitation-Hg deposition at the study sites was 10.4 micrograms per square meter per year (ug/m2/year) and ranged from 5.8 ug/m2/year to 15.0 ug/m2/year. The median annual Hg concentration was 9.4 ng/L. Annual litterfall-Hg deposition had a median of 16.1 ug/m2/year and ranged from 9.7 to 23.4 ug/m2/year. Isopleth maps of annual precipitation-Hg deposition indicated a recurring spatial pattern similar to one revealed by statistical analysis of weekly precipitation-Hg deposition. In that pattern, high Hg deposition in southeastern Indiana was present each year, frequently extending to southern Illinois. Most of central Indiana and central Illinois had similar Hg deposition. Areas with comparatively lower annual Hg deposition were observed in Michigan and Ohio for many years and frequently included part of northern Indiana. The area in southern Indiana where high Hg deposition predominated had the highest number of extreme episodes of weekly Hg deposition delivering up to 15% of the annual Hg load from precipitation in a single week. Modeled 48-h back trajectories indicated air masses for these episodes often arrived from the south and southwest, crossing numerous stationary sources of Hg emissions releasing from 23 to more than 300 kg Hg per year. This analysis suggests that local and regional, rather than exclusively continental or global Hg emissions were likely contributing to the extreme episodes and at least in part, to the spatial

  16. Prior knowledge about spatial pattern affects patch assessment rather than movement between patches in tactile-feeding Mallard

    NARCIS (Netherlands)

    Klaassen, R.H.G.; Nolet, B.A.; Van Leeuwen, C.H.A.

    2007-01-01

    1. Heterogeneity in food abundance allows a forager to concentrate foraging effort in patches that are rich in food. This might be problematic when food is cryptic, as the content of patches is unknown prior to foraging. In such case knowledge about the spatial pattern in the distribution of food

  17. Spatial pattern of a subalpine forest-alpine pasture ecotone (Las Cutas, Ordesa, Central Pyrenees)

    OpenAIRE

    Camarero, J. J.; Gutierrez, E.

    1999-01-01

    We describe the spatial pattern of a subalpine forest-alpine pasture ecotone in the Central Pyrenees, that includes altitudinal timberline and treeline, and it is dominated by Pinus uncinata Ram. A rectangular (30 x 140 m) plot was located crossing the ecotone with its longest side parallel to the slope. We measured for each P. uncinata individual inside the plot: location (coordinates x, y), and structure (e. g. height) and growth form variables (number and type —living or dead, vertical or ...

  18. Competitive STDP Learning of Overlapping Spatial Patterns.

    Science.gov (United States)

    Krunglevicius, Dalius

    2015-08-01

    Spike-timing-dependent plasticity (STDP) is a set of Hebbian learning rules firmly based on biological evidence. It has been demonstrated that one of the STDP learning rules is suited for learning spatiotemporal patterns. When multiple neurons are organized in a simple competitive spiking neural network, this network is capable of learning multiple distinct patterns. If patterns overlap significantly (i.e., patterns are mutually inclusive), however, competition would not preclude trained neuron's responding to a new pattern and adjusting synaptic weights accordingly. This letter presents a simple neural network that combines vertical inhibition and Euclidean distance-dependent synaptic strength factor. This approach helps to solve the problem of pattern size-dependent parameter optimality and significantly reduces the probability of a neuron's forgetting an already learned pattern. For demonstration purposes, the network was trained for the first ten letters of the Braille alphabet.

  19. SEARCHING FOR URBAN PATTERNS; AN ASSESSMENT OF HISTORIC EDGES AND ITS SURROUNDING CONTEXT: HISTORIC CAIRO AS A CASE STUDY

    Directory of Open Access Journals (Sweden)

    Nabil Mohareb

    2016-07-01

    Full Text Available This paper analyzes the urban edges of historic cities. Managing these edges would enhance the success of any intervention projects inside the historic fabric. The paper develops and tests a method of analytical assessment framework that is applicable for quantitative analysis within an urban edge. It is capable of measuring micro and macro levels of analysis of historic urban edges with reference to their spatial configuration. In addition, the paper searches for repetitive spatial configuration patterns. The main case study is Historic Cairo. The paper reveals that there are apparent patterns of cause and effect of both spatial configurations and related activities along the urban edges, forming different type of barriers. The paper discovers the repetitive spatial, architectural, and land-use patterns that exist on various edges. These patterns enable the possibility of learning and acquiring from other successful interventions that have been applied to similar patterns, without being limited to cultural or contextual differences.

  20. Multi-Scale Influences of Climate, Spatial Pattern, and Positive Feedback on 20th Century Tree Establishment at Upper Treeline in the Rocky Mountains, USA

    Science.gov (United States)

    Elliott, G. P.

    2009-12-01

    The influences of 20th century climate, spatial pattern of tree establishment, and positive feedback were assessed to gain a more holistic understanding of how broad scale abiotic and local scale biotic components interact to govern upper treeline ecotonal dynamics along a latitudinal gradient (ca. 35°N-45°N) in the Rocky Mountains. Study sites (n = 22) were in the Bighorn, Medicine Bow, Front Range, and Sangre de Cristo mountain ranges. Dendroecological techniques were used for a broad scale analysis of climate at treeline. Five-year age-structure classes were compared with identical five-year bins of 20th century climate data using Spearman’s rank correlation and regime shift analysis. Local scale biotic interactions capable of ameliorating broad scale climate inputs through positive feedback were examined by using Ripley’s K to determine the spatial patterns of tree establishment above timberline. Significant correlations (p Medicine Bow and Sangre de Cristo Mountains primarily contain clustered spatial patterns of trees above timberline, which indicates a strong reliance on the amelioration of abiotic conditions through positive feedback with nearby vegetation. Although clustered spatial patterns likely originate in response to harsh abiotic conditions such as drought or constant strong winds, the local scale biotic interactions within a clustered formation of trees appears to override the immediate influence of broad scale climate. This is evidenced both by a lack of significant correlations between tree establishment and climate in these mountain ranges, as well as the considerable lag times between initial climate regime shifts and corresponding shifts in tree age structure. Taken together, this research suggests that the influence of broad scale climate on upper treeline ecotonal dynamics is contingent on the local scale spatial patterns of tree establishment and related influences of positive feedback. These findings have global implications for our

  1. Applying spatial clustering analysis to a township-level social vulnerability assessment in Taiwan

    Directory of Open Access Journals (Sweden)

    Wen-Yen Lin

    2016-09-01

    Full Text Available The degree of social vulnerability may vary according to the conditions and backgrounds of different locations, yet spatial clustering phenomena may exist when nearby spatial units exhibit similar characteristics. This study applied spatial autocorrelation statistics to analyze the spatial association of vulnerability among townships in Taiwan. The vulnerability was first assessed on the basis of a social vulnerability index that was constructed using Fuzzy Delphi and analytic hierarchy process methods. Subsequently, the corresponding indicator variables were applied to calculate standardized vulnerability assessment scores by using government data. According to the results of the vulnerability assessment in which T scores were normalized, the distribution of social vulnerabilities varied among the townships. The scores were further analyzed using spatial autocorrelation statistics for spatial clustering of vulnerability distribution. The Local G statistic identified 42 significant spatial association pockets, whereas the Global G statistic indicated no spatial phenomenon of clustering. This phenomenon was verified and explained by applying Moran's I statistics to examine the homogeneity and heterogeneity of spatial associations. Although both statistics were originally designed to identify the existence of spatial clustering, they serve diverse purposes, and the results can be compared to obtain additional insights into the distribution patterns of social vulnerability.

  2. Spatial relationship between tumor perfusion and endogeneous glucose distribution

    International Nuclear Information System (INIS)

    Schroeder, T.; Larrier, N.; Viglianti, B.; Rabbani, Z.N.; Peltz, C.; Vujascovic, Z.; Dewhirst, M.W.

    2003-01-01

    Earlier studies detecting glucose in tissue and solid tumors by bioluminescence imaging suggested, that glucose distribution patterns may be spatially related to functional vascularity. The purpose of this study was to evaluate this relationship by comparing glucose distribution patterns as determined by bioluminescence imaging to perfusion patterns of endogeneous Hoechst 33342 in rats bearing mammary carcinomas. R 3230 mammary carcinoma cells have been implanted subcutaneously into 7 female Fischer 344 rats. Two months post implantation, after injection of Hoechst 33342 the tumors were removed and snap frozen to conserve metabolite levels. Concomitantly, blood was sampled from the animals for analysis of glucose concentrations using a micodialysis analyzer. Cryosections of the tumors have been prepared, and every slice has been analyzed for both, Hoechst binding by fluorescence microscopy, and for glucose distribution patterns using bioluminescence imaging. In many cases vascular structures could be retrieved by the spatial pattern of glucose distribution. In some cases however, higher glucose concentrations could be found independent from Hoechst signal. On the other hand, regions of high Hoechst signal are not necessarily correlated with high glucose concentrations. When comparing blood and tissue glucose levels, tissue glucose content as measured with bioluminescence imaging (1.9-3.5 mM) is considerably lower than blood glucose (5.6-8.0 mM), demonstrating the expected gradient from blood to tissue. This study demonstrates the feasibility of monitoring glucose gradients in relation to functional vasculature throughout the body, from blood down to tissue or tumor and further, throughout the microenvironment of the solid tumor. Glucose distribution patterns may be an important tool in perfusion studies, e. g. in detecting the direction of blood flow in ex-vivo samples or in estimating glucose consumption rates of tumor cells adjacent to or in between perfused

  3. Potential for tree rings to reveal spatial patterns of past drought variability across western Australia

    Science.gov (United States)

    O'Donnell, Alison J.; Cook, Edward R.; Palmer, Jonathan G.; Turney, Chris S. M.; Grierson, Pauline F.

    2018-02-01

    Proxy records have provided major insights into the variability of past climates over long timescales. However, for much of the Southern Hemisphere, the ability to identify spatial patterns of past climatic variability is constrained by the sparse distribution of proxy records. This is particularly true for mainland Australia, where relatively few proxy records are located. Here, we (1) assess the potential to use existing proxy records in the Australasian region—starting with the only two multi-century tree-ring proxies from mainland Australia—to reveal spatial patterns of past hydroclimatic variability across the western third of the continent, and (2) identify strategic locations to target for the development of new proxy records. We show that the two existing tree-ring records allow robust reconstructions of past hydroclimatic variability over spatially broad areas (i.e. > 3° × 3°) in inland north- and south-western Australia. Our results reveal synchronous periods of drought and wet conditions between the inland northern and southern regions of western Australia as well as a generally anti-phase relationship with hydroclimate in eastern Australia over the last two centuries. The inclusion of 174 tree-ring proxy records from Tasmania, New Zealand and Indonesia and a coral record from Queensland did not improve the reconstruction potential over western Australia. However, our findings suggest that the addition of relatively few new proxy records from key locations in western Australia that currently have low reconstruction skill will enable the development of a comprehensive drought atlas for the region, and provide a critical link to the drought atlases of monsoonal Asia and eastern Australia and New Zealand.

  4. Comparison of the common spatial interpolation methods used to analyze potentially toxic elements surrounding mining regions.

    Science.gov (United States)

    Ding, Qian; Wang, Yong; Zhuang, Dafang

    2018-04-15

    The appropriate spatial interpolation methods must be selected to analyze the spatial distributions of Potentially Toxic Elements (PTEs), which is a precondition for evaluating PTE pollution. The accuracy and effect of different spatial interpolation methods, which include inverse distance weighting interpolation (IDW) (power = 1, 2, 3), radial basis function interpolation (RBF) (basis function: thin-plate spline (TPS), spline with tension (ST), completely regularized spline (CRS), multiquadric (MQ) and inverse multiquadric (IMQ)) and ordinary kriging interpolation (OK) (semivariogram model: spherical, exponential, gaussian and linear), were compared using 166 unevenly distributed soil PTE samples (As, Pb, Cu and Zn) in the Suxian District, Chenzhou City, Hunan Province as the study subject. The reasons for the accuracy differences of the interpolation methods and the uncertainties of the interpolation results are discussed, then several suggestions for improving the interpolation accuracy are proposed, and the direction of pollution control is determined. The results of this study are as follows: (i) RBF-ST and OK (exponential) are the optimal interpolation methods for As and Cu, and the optimal interpolation method for Pb and Zn is RBF-IMQ. (ii) The interpolation uncertainty is positively correlated with the PTE concentration, and higher uncertainties are primarily distributed around mines, which is related to the strong spatial variability of PTE concentrations caused by human interference. (iii) The interpolation accuracy can be improved by increasing the sample size around the mines, introducing auxiliary variables in the case of incomplete sampling and adopting the partition prediction method. (iv) It is necessary to strengthen the prevention and control of As and Pb pollution, particularly in the central and northern areas. The results of this study can provide an effective reference for the optimization of interpolation methods and parameters for

  5. The variability of the primeval forest's spatial pattern in the Babia Gora National Park

    International Nuclear Information System (INIS)

    Chrobaczek, U.; Jastrzebski, R.; Ziemniewicz, M.; Kaczor, D.; Widlak, M.; Lesiak, M.

    2011-01-01

    This paper analyzes the spatial variability of stand volume, species composition and regeneration in a primeval stand located in the lower maintain belt in the Babia Gora massif. These characteristics were surveyed on 259 circular plots (of a 7.0 m radius) located in a square grid 20 m · 20 m on the total area 10.36 ha. (authors)

  6. Locking of Turing patterns in the chlorine dioxide-iodine-malonic acid reaction with one-dimensional spatial periodic forcing.

    Science.gov (United States)

    Dolnik, Milos; Bánsági, Tamás; Ansari, Sama; Valent, Ivan; Epstein, Irving R

    2011-07-21

    We use the photosensitive chlorine dioxide-iodine-malonic acid reaction-diffusion system to study wavenumber locking of Turing patterns with spatial periodic forcing. Wavenumber-locked stripe patterns are the typical resonant structures that labyrinthine patterns exhibit in response to one-dimensional forcing by illumination when images of stripes are projected on a working medium. Our experimental results reveal that segmented oblique, hexagonal and rectangular patterns can also be obtained. However, these two-dimensional resonant structures only develop in a relatively narrow range of forcing parameters, where the unforced stripe pattern is in close proximity to the domain of hexagonal patterns. Numerical simulations based on a model that incorporates the forcing by illumination using an additive term reproduce well the experimental observations. These findings confirm that additive one-dimensional forcing can generate a two-dimensional resonant response. However, such a response is considerably less robust than the effect of multiplicative forcing. This journal is © the Owner Societies 2011

  7. Where did Venomous Snakes Strike? A Spatial Statistical Analysis of Snakebite Cases in Bondowoso Regency, Indonesia

    Directory of Open Access Journals (Sweden)

    Farid Rifaie

    2017-07-01

    Full Text Available Snakebite envenomation in Indonesia is a health burden that receives no attention from stakeholders. The high mortality and morbidity rate caused by snakebite in Indonesia is estimated from regional reports. The true burden of this issue in Indonesia needs to be revealed even starting from a small part of the country. Medical records from a Hospital in Bondowoso Regency were the data source of the snakebite cases. Three spatial statistical summaries were applied to analyze the spatial pattern of snakebite incidents. The comparison between statistical functions and the theoretical model of random distributions shows a significant clustering pattern of the events. The pattern indicates that five subdistricts in Bondowoso have a substantial number of snakebite cases more than other regions. This finding shows the potential application of spatial statistics for the snakebite combating strategy in this area by identifying the priority locations of the snakebite cases.

  8. A multitracer approach to assess the spatial contamination pattern of hake (Merluccius merluccius) in the French Mediterranean.

    Science.gov (United States)

    Cresson, Pierre; Bouchoucha, Marc; Morat, Fabien; Miralles, Francoise; Chavanon, Fabienne; Loizeau, Veronique; Cossa, Daniel

    2015-11-01

    Chemical contamination levels and stable isotope ratios provide integrated information about contaminant exposure, trophic position and also biological and environmental influences on marine organisms. By combining these approaches with otolith shape analyses, the aim of the present study was to document the spatial variability of Hg and PCB contamination of the European hake (Merluccius merluccius) in the French Mediterranean, hypothesizing that local contaminant sources, environmental conditions and biological specificities lead to site-specific contamination patterns. High Hg concentrations discriminated Corsica (average: 1.36 ± 0.80 μg g(-1) dm) from the Gulf of Lions (average valuesLions, whatever the sex of the individuals, whereas the highest values in Corsica were 6.75 ± 4.22 ng g(-1) dm. Otolith shape discriminated juveniles and adults, due to their different habitats. The use of combined ecotracers was revealed as a powerful tool to discriminate between fish populations at large and small spatial scale, and to enable understanding of the environmental and biological influences on contamination patterns. Copyright © 2015 Elsevier B.V. All rights reserved.

  9. Development of spatially diverse and complex dune-field patterns: Gran Desierto Dune Field, Sonora, Mexico

    Science.gov (United States)

    Beveridge, C.; Kocurek, G.; Ewing, R.C.; Lancaster, N.; Morthekai, P.; Singhvi, A.K.; Mahan, S.A.

    2006-01-01

    The pattern of dunes within the Gran Desierto of Sonora, Mexico, is both spatially diverse and complex. Identification of the pattern components from remote-sensing images, combined with statistical analysis of their measured parameters demonstrate that the composite pattern consists of separate populations of simple dune patterns. Age-bracketing by optically stimulated luminescence (OSL) indicates that the simple patterns represent relatively short-lived aeolian constructional events since ???25 ka. The simple dune patterns consist of: (i) late Pleistocene relict linear dunes; (ii) degraded crescentic dunes formed at ???12 ka; (iii) early Holocene western crescentic dunes; (iv) eastern crescentic dunes emplaced at ???7 ka; and (v) star dunes formed during the last 3 ka. Recognition of the simple patterns and their ages allows for the geomorphic backstripping of the composite pattern. Palaeowind reconstructions, based upon the rule of gross bedform-normal transport, are largely in agreement with regional proxy data. The sediment state over time for the Gran Desierto is one in which the sediment supply for aeolian constructional events is derived from previously stored sediment (Ancestral Colorado River sediment), and contemporaneous influx from the lower Colorado River valley and coastal influx from the Bahia del Adair inlet. Aeolian constructional events are triggered by climatic shifts to greater aridity, changes in the wind regime, and the development of a sediment supply. The rate of geomorphic change within the Gran Desierto is significantly greater than the rate of subsidence and burial of the accumulation surface upon which it rests. ?? 2006 The Authors. Journal compilation 2006 International Association of Sedimentologists.

  10. Spatial variability in floodplain sedimentation: the use of generalized linear mixed-effects models

    Directory of Open Access Journals (Sweden)

    A. Cabezas

    2010-08-01

    Full Text Available Sediment, Total Organic Carbon (TOC and total nitrogen (TN accumulation during one overbank flood (1.15 y return interval were examined at one reach of the Middle Ebro River (NE Spain for elucidating spatial patterns. To achieve this goal, four areas with different geomorphological features and located within the study reach were examined by using artificial grass mats. Within each area, 1 m2 study plots consisting of three pseudo-replicates were placed in a semi-regular grid oriented perpendicular to the main channel. TOC, TN and Particle-Size composition of deposited sediments were examined and accumulation rates estimated. Generalized linear mixed-effects models were used to analyze sedimentation patterns in order to handle clustered sampling units, specific-site effects and spatial self-correlation between observations. Our results confirm the importance of channel-floodplain morphology and site micro-topography in explaining sediment, TOC and TN deposition patterns, although the importance of other factors as vegetation pattern should be included in further studies to explain small-scale variability. Generalized linear mixed-effect models provide a good framework to deal with the high spatial heterogeneity of this phenomenon at different spatial scales, and should be further investigated in order to explore its validity when examining the importance of factors such as flood magnitude or suspended sediment concentration.

  11. Spatial pattern analysis and demography of two tropical trees in the Brazilian Caatinga

    Directory of Open Access Journals (Sweden)

    Maira Fontes Manzan

    2014-12-01

    Full Text Available Aspidosperma pyrifolium (Apocynaceae and Caesalpinia pyramidalis (Fabaceae share the same habitat in the Brazilian Caatinga domain. In this paper, we investigate the intra and inter-species interactions between these two plants using spatial pattern analysis among cohorts. The results showed that the adult trees of each species present higher densities at distances shorter than 9 m to 12 m. However, due to seed dispersal via autochory, we expected a more aggregate density for C. pyramidalis than A. pyrifolium as the later disperses seeds through anemochory. Difference in spatial aggregation among cohorts was not observed and therefore the results contradict the expectations of the Janzen-Connell hypothesis. It is likely that this is associated with anthropogenic factors in the past such as fire, animal husbandry and logging. Using a bivariate analysis of the neighborhood density, we also confirmed the significant coexistence between the two species. This coexistence could be explained by the process of positive interspecific interactions, such as facilitation, which is common in semi-arid regions under stressful conditions.

  12. Nonequilibrium transition and pattern formation in a linear reaction-diffusion system with self-regulated kinetics

    Science.gov (United States)

    Paul, Shibashis; Ghosh, Shyamolina; Ray, Deb Shankar

    2018-02-01

    We consider a reaction-diffusion system with linear, stochastic activator-inhibitor kinetics where the time evolution of concentration of a species at any spatial location depends on the relative average concentration of its neighbors. This self-regulating nature of kinetics brings in spatial correlation between the activator and the inhibitor. An interplay of this correlation in kinetics and disparity of diffusivities of the two species leads to symmetry breaking non-equilibrium transition resulting in stationary pattern formation. The role of initial noise strength and the linear reaction terms has been analyzed for pattern selection.

  13. Pattern detection in stream networks: Quantifying spatialvariability in fish distribution

    Science.gov (United States)

    Torgersen, Christian E.; Gresswell, Robert E.; Bateman, Douglas S.

    2004-01-01

    Biological and physical properties of rivers and streams are inherently difficult to sample and visualize at the resolution and extent necessary to detect fine-scale distributional patterns over large areas. Satellite imagery and broad-scale fish survey methods are effective for quantifying spatial variability in biological and physical variables over a range of scales in marine environments but are often too coarse in resolution to address conservation needs in inland fisheries management. We present methods for sampling and analyzing multiscale, spatially continuous patterns of stream fishes and physical habitat in small- to medium-size watersheds (500–1000 hectares). Geospatial tools, including geographic information system (GIS) software such as ArcInfo dynamic segmentation and ArcScene 3D analyst modules, were used to display complex biological and physical datasets. These tools also provided spatial referencing information (e.g. Cartesian and route-measure coordinates) necessary for conducting geostatistical analyses of spatial patterns (empirical semivariograms and wavelet analysis) in linear stream networks. Graphical depiction of fish distribution along a one-dimensional longitudinal profile and throughout the stream network (superimposed on a 10-metre digital elevation model) provided the spatial context necessary for describing and interpreting the relationship between landscape pattern and the distribution of coastal cutthroat trout (Oncorhynchus clarki clarki) in western Oregon, U.S.A. The distribution of coastal cutthroat trout was highly autocorrelated and exhibited a spherical semivariogram with a defined nugget, sill, and range. Wavelet analysis of the main-stem longitudinal profile revealed periodicity in trout distribution at three nested spatial scales corresponding ostensibly to landscape disturbances and the spacing of tributary junctions.

  14. Spatial organization of seismicity and fracture pattern at the boundary between Alps and Dinarides

    Science.gov (United States)

    Bressan, Gianni; Ponton, Maurizio; Rossi, Giuliana; Urban, Sandro

    2016-04-01

    The paper affords the study of the spatial organization of seismicity in the easternmost region of the Alps (Friuli, in NE Italy and W Slovenia), dominated by the interference between the Alpine and the Dinaric tectonic systems. Two non-conventional methods of spatial analysis are used: fractal analysis and principal component analysis (PCA). The fractal analysis helps to discriminate the cases in which hypocentres clearly define a plane, from the ones in which hypocenter distribution tends to the planarity, without reaching it. The PCA analysis is used to infer the orientation of planes fitting through earthquake foci, or the direction of propagation of the hypocentres. Furthermore, we study the spatial seismicity pattern at the shallow depths in the context of a general damage model, through the crack density distribution. The results of the three methods concur to a complex and composite model of fracturing in the region. The hypocentre pattern fills only partially a plane, i.e. has a fractal dimension close to 2. The three exceptions regard planes with Dinaric trend, without interference with Alpine lineaments. The shallowest depth range (0-10 km depth) is characterized by the activation of planes with variable orientations, reflecting the interference between the Dinaric and the Alpine tectonic structures, and closely bound to the variation of the mechanical properties of the crust. The seismicity occurs mostly in areas characterized by a variation from low to moderate crack density, indicating the sharp transition from zones of low damage to zones of moderate damage. Low crack density indicates the presence of more competent rocks capable of sustaining high strain energy while high crack density areas pertain to highly fractured rocks that cannot store high strain energy. Brittle failure, i.e. seismic activity, is favoured within the sharp transitions from low to moderate crack density zones. The orientation of the planes depicting the seismic activity

  15. Does sex matter? Temporal and spatial patterns of cougar-human conflict in British Columbia.

    Directory of Open Access Journals (Sweden)

    Kristine J Teichman

    Full Text Available Wildlife-human conflicts occur wherever large carnivores overlap human inhabited areas. Conflict mitigation can be facilitated by understanding long-term dynamics and examining sex-structured conflict patterns. Predicting areas with high probability of conflict helps focus management strategies in order to proactively decrease carnivore mortality. We investigated the importance of cougar (Puma concolor habitat, human landscape characteristics and the combination of habitat and human features on the temporal and spatial patterns of cougar-human conflicts in British Columbia. Conflicts (n = 1,727; 1978-2007 involved similar numbers of male and female cougars with conflict rate decreasing over the past decade. Conflicts were concentrated within the southern part of the province with the most conflicts per unit area occurring on Vancouver Island. For both sexes, the most supported spatial models for the most recent (1998-2007 conflicts contained both human and habitat variables. Conflicts were more likely to occur close to roads, at intermediate elevations and far from the northern edge of the cougar distribution range in British Columbia. Male cougar conflicts were more likely to occur in areas of intermediate human density. Unlike cougar conflicts in other regions, cattle density was not a significant predictor of conflict location. With human populations expanding, conflicts are expected to increase. Conservation tools, such as the maps predicting conflict hotspots from this study, can help focus management efforts to decrease carnivore-human conflict.

  16. Analyzing animal movement patterns using potential functions

    Science.gov (United States)

    H. K. Preisler; A. A. Ager; M. J. Wisdom

    2013-01-01

    The advent of GPS technology has made it possible to study human-wildlife interactions on large landscapes and quantify behavioral responses to recreation and other anthropogenic disturbances at increasingly fine scales. Of particular interest are the potential impacts on habitat use patterns, energetics, and cascading impacts on fecundity and other life history traits...

  17. Regular Topographic Patterning of Karst Depressions Suggests Landscape Self-Organization

    Science.gov (United States)

    Quintero, C.; Cohen, M. J.

    2017-12-01

    Thousands of wetland depressions that are commonly host to cypress domes dot the sub-tropical limestone landscape of South Florida. The origin of these depression features has been the topic of debate. Here we build upon the work of previous surveyors of this landscape to analyze the morphology and spatial distribution of depressions on the Big Cypress landscape. We took advantage of the emergence and availability of high resolution Light Direction and Ranging (LiDAR) technology and ArcMap GIS software to analyze the structure and regularity of landscape features with methods unavailable to past surveyors. Six 2.25 km2 LiDAR plots within the preserve were selected for remote analysis and one depression feature within each plot was selected for more intensive sediment and water depth surveying. Depression features on the Big Cypress landscape were found to show strong evidence of regular spatial patterning. Periodicity, a feature of regularly patterned landscapes, is apparent in both Variograms and Radial Spectrum Analyses. Size class distributions of the identified features indicate constrained feature sizes while Average Nearest Neighbor analyses support the inference of dispersed features with non-random spacing. The presence of regular patterning on this landscape strongly implies biotic reinforcement of spatial structure by way of the scale dependent feedback. In characterizing the structure of this wetland landscape we add to the growing body of work dedicated to documenting how water, life and geology may interact to shape the natural landscapes we see today.

  18. Spatial reconstruction of single-cell gene expression data.

    Science.gov (United States)

    Satija, Rahul; Farrell, Jeffrey A; Gennert, David; Schier, Alexander F; Regev, Aviv

    2015-05-01

    Spatial localization is a key determinant of cellular fate and behavior, but methods for spatially resolved, transcriptome-wide gene expression profiling across complex tissues are lacking. RNA staining methods assay only a small number of transcripts, whereas single-cell RNA-seq, which measures global gene expression, separates cells from their native spatial context. Here we present Seurat, a computational strategy to infer cellular localization by integrating single-cell RNA-seq data with in situ RNA patterns. We applied Seurat to spatially map 851 single cells from dissociated zebrafish (Danio rerio) embryos and generated a transcriptome-wide map of spatial patterning. We confirmed Seurat's accuracy using several experimental approaches, then used the strategy to identify a set of archetypal expression patterns and spatial markers. Seurat correctly localizes rare subpopulations, accurately mapping both spatially restricted and scattered groups. Seurat will be applicable to mapping cellular localization within complex patterned tissues in diverse systems.

  19. Florida Agriculture - Utilizing TRMM to Analyze Sea Breeze Thunderstorm Patterns During El Nino Southern Oscillations and Their Effects Upon Available Fresh Water for South Florida Agricultural Planning and Management

    Science.gov (United States)

    Billiot, Amanda; Lee, Lucas; McKee, Jake; Cooley, Zachary Clayton; Mitchell, Brandie

    2010-01-01

    This project utilizes Tropical Rainfall Measuring Mission (TRMM) and Landsat satellite data to assess the impact of sea breeze precipitation upon areas of agricultural land use in southern Florida. Water is a critical resource to agriculture, and the availability of water for agricultural use in Florida continues to remain a key issue. Recent projections of statewide water use by 2020 estimate that 9.3 billion gallons of water per day will be demanded, and agriculture represents 47% of this demand (Bronson 2003). Farmers have fewer options for water supplies than public users and are often limited to using available supplies from surface and ground water sources which depend in part upon variable weather patterns. Sea breeze thunderstorms are responsible for much of the rainfall delivered to Florida during the wet season (May-October) and have been recognized as an important overall contributor of rainfall in southern Florida (Almeida 2003). TRMM satellite data was used to analyze how sea breeze-induced thunderstorms during El Nino and La Nina affected interannual patterns of precipitation in southern Florida from 1998-2009. TRMM's Precipitation Radar and Microwave Imager provide data to quantify water vapor in the atmosphere, precipitation rates and intensity, and the distribution of precipitation. Rainfall accumulation data derived from TRMM and other microwave sensors were used to analyze the temporal and spatial variations of rainfall during each phase of the El Nino Southern Oscillation (ENSO). Through the use of TRMM and Landsat, slight variations were observed, but it was determined that neither sea breeze nor total rainfall patterns in South Florida were strongly affected by ENSO during the study period. However, more research is needed to characterize the influence of ENSO on summer weather patterns in South Florida. This research will provide the basis for continued observations and study with the Global Precipitation Measurement Mission.

  20. Seed-deposition and recruitment patterns of Clusia species in a disturbed tropical montane forest in Bolivia

    Science.gov (United States)

    Saavedra, Francisco; Hensen, Isabell; Apaza Quevedo, Amira; Neuschulz, Eike Lena; Schleuning, Matthias

    2017-11-01

    Spatial patterns of seed dispersal and recruitment of fleshy-fruited plants in tropical forests are supposed to be driven by the activity of animal seed dispersers, but the spatial patterns of seed dispersal, seedlings and saplings have rarely been analyzed simultaneously. We studied seed deposition and recruitment patterns of three Clusia species in a tropical montane forest of the Bolivian Andes and tested whether these patterns changed between habitat types (forest edge vs. forest interior), distance to the fruiting tree and consecutive recruitment stages of the seedlings. We recorded the number of seeds deposited in seed traps to assess the local seed-deposition pattern and the abundance and distribution of seedlings and saplings to evaluate the spatial pattern of recruitment. More seeds were removed and deposited at the forest edge than in the interior. The number of deposited seeds decreased with distance from the fruiting tree and was spatially clustered in both habitat types. The density of 1-yr-old seedlings and saplings was higher at forest edges, whereas the density of 2-yr-old seedlings was similar in both habitat types. While seedlings were almost randomly distributed, seeds and saplings were spatially clustered in both habitat types. Our findings demonstrate systematic changes in spatial patterns of recruits across the plant regeneration cycle and suggest that the differential effects of biotic and abiotic factors determine plant recruitment at the edges and in the interior of tropical montane forests. These differences in the spatial distribution of individuals across recruitment stages may have strong effects on plant community dynamics and influence plant species coexistence in disturbed tropical forests.

  1. A THREE-STEP SPATIAL-TEMPORAL-SEMANTIC CLUSTERING METHOD FOR HUMAN ACTIVITY PATTERN ANALYSIS

    Directory of Open Access Journals (Sweden)

    W. Huang

    2016-06-01

    Full Text Available How people move in cities and what they do in various locations at different times form human activity patterns. Human activity pattern plays a key role in in urban planning, traffic forecasting, public health and safety, emergency response, friend recommendation, and so on. Therefore, scholars from different fields, such as social science, geography, transportation, physics and computer science, have made great efforts in modelling and analysing human activity patterns or human mobility patterns. One of the essential tasks in such studies is to find the locations or places where individuals stay to perform some kind of activities before further activity pattern analysis. In the era of Big Data, the emerging of social media along with wearable devices enables human activity data to be collected more easily and efficiently. Furthermore, the dimension of the accessible human activity data has been extended from two to three (space or space-time to four dimensions (space, time and semantics. More specifically, not only a location and time that people stay and spend are collected, but also what people “say” for in a location at a time can be obtained. The characteristics of these datasets shed new light on the analysis of human mobility, where some of new methodologies should be accordingly developed to handle them. Traditional methods such as neural networks, statistics and clustering have been applied to study human activity patterns using geosocial media data. Among them, clustering methods have been widely used to analyse spatiotemporal patterns. However, to our best knowledge, few of clustering algorithms are specifically developed for handling the datasets that contain spatial, temporal and semantic aspects all together. In this work, we propose a three-step human activity clustering method based on space, time and semantics to fill this gap. One-year Twitter data, posted in Toronto, Canada, is used to test the clustering-based method. The

  2. Spatial and temporal patterns of net primary productivity in the duration of 1981-2000 in Guangdong, China

    Science.gov (United States)

    Liu, Hai-Gui; Tang, Xu-Li; Zhou, Guo-Yi; Liu, Shu-Guang

    2007-01-01

    The knowledge of net primary production (NPP) dynamics at regional scale will help to understand terrestrial carbon cycling, especially with respect to land use and global climate change. Guangdong province has high plant growth potential because of plenty of light, heat, and water resources in this region. Forest coverage increased significantly from less than 30% in the early l980s to approximately 60% in 2000 owing to the launching of the "Greening Guangdong in 10 years", a provincial afforestation and reforestation project started in 1985. Meanwhile, economy growth has been fast in Guangdong province during the past 20 years. Long-term spatial and temporal NPP dynamics in Guangdong province are not well-known. To fill this knowledge gap, the spatial and temporal patterns of annual NPP from 1981 to 2000, derived from the global production efficiency model (GLO-PEM), were analyzed in this study. NPP patterns were compared at three spatial scales (i. e. , province, region, and city) and among three major forest types (i. e. , broadleaf, coniferous, and mixed). The results showed that for the entire province annual NPP varied between (1360 ±431) and (1626 ± 471) g/(m^2•a), with a mean value of (1480 ±407)g/(m^2•a). NPP increased to the maximum value (1534 ±121 g/(m^2•a)) in late 1980s (1986~1990) while decreased in early 1990s (1991~1995), and then recovered slightly in late 1990s (1996~2000). NPP differed distinctly across geographic regions, with the highest in the southwest coastal region, followed by the southeast coastal region, and the lowest in the inner land region. The differences were probably caused by vegetation composition, heat and water resources, and the distribution of the cropland. NPP dynamics of 21 cities were divided into three types. NPP kept stable in 12 cities including Shaoguan, Qingyuan, and Meizhou etc. NPP increased in Chaozhou, Shanwei, Zhanjiang and Jieyang, and decreased significantly (pcities (i. e. , Foshan, Zhongshan

  3. Spatial distribution

    DEFF Research Database (Denmark)

    Borregaard, Michael Krabbe; Hendrichsen, Ditte Katrine; Nachman, Gøsta Støger

    2008-01-01

    , depending on the nature of intraspecific interactions between them: while the individuals of some species repel each other and partition the available area, others form groups of varying size, determined by the fitness of each group member. The spatial distribution pattern of individuals again strongly......Living organisms are distributed over the entire surface of the planet. The distribution of the individuals of each species is not random; on the contrary, they are strongly dependent on the biology and ecology of the species, and vary over different spatial scale. The structure of whole...... populations reflects the location and fragmentation pattern of the habitat types preferred by the species, and the complex dynamics of migration, colonization, and population growth taking place over the landscape. Within these, individuals are distributed among each other in regular or clumped patterns...

  4. Freshwater fish’s spatial patterns in isolated water springs in North-eastern Mexico

    Directory of Open Access Journals (Sweden)

    Jorge Palacio-Núñez

    2010-03-01

    Full Text Available The Media Luna lake-spring was selected as representative of all thermal or no thermal springs in the zone of Valley of Rioverde, a semi-arid vegetation in the North-eastern of Mexico. This system is inhabited by 11 fish species, of which six are native. Four of the native species are endemic to the region and threatened due to touristic pressure and to the introduction of exotic species. The objectives were to determine the characteristics that influence the spatial distribution of the fish species, to analyze their spatial distribution patterns, and to describe the relationships between the different species. The general aim was to establish some basis for the conservation of these fish communities and their habitat. Several sessions were initiated in 1992 through direct observation. Later, between 1998 and 1999 five systematically seasonal sampling sessions were conducted (54 subaquatic transects/session. Finally, the data was updated by sampling in summer 2002 and winter 2006. Through the analysis was performed only for endemics of the region, like Ataeniobius toweri Meek, Cualac tessellatus Miller, Cichlasoma bartoni Bean and C. labridens Pellegrin, in at least one life stage, showed correlation with habitat variables or with other species. For these species, patterns of spatial aggregation and association with other species were observed. These results show a certain degree of specialization of endemic species to some microhabitat characteristics, as well as a significant interaction with other native species which they coexist. In addition, some significant relations between endemic and alien species suggest an antagonist relation. Management actions focused in the touristic use of the spring represent the main threat for these species, followed by an adequate management of exotic species. This study provides basis for future responsible management of these wetlands, where tourism and conservation can be combined. Rev. Biol. Trop. 58 (1

  5. Quantifying spatial genetic structuring in mesophotic populations of the precious coral Corallium rubrum.

    Science.gov (United States)

    Costantini, Federica; Carlesi, Lorenzo; Abbiati, Marco

    2013-01-01

    While shallow water red coral populations have been overharvested in the past, nowadays, commercial harvesting shifted its pressure on mesophotic organisms. An understanding of red coral population structure, particularly larval dispersal patterns and connectivity among harvested populations is paramount to the viability of the species. In order to determine patterns of genetic spatial structuring of deep water Corallium rubrum populations, for the first time, colonies found between 58-118 m depth within the Tyrrhenian Sea were collected and analyzed. Ten microsatellite loci and two regions of mitochondrial DNA (mtMSH and mtC) were used to quantify patterns of genetic diversity within populations and to define population structuring at spatial scales from tens of metres to hundreds of kilometres. Microsatellites showed heterozygote deficiencies in all populations. Significant levels of genetic differentiation were observed at all investigated spatial scales, suggesting that populations are likely to be isolated. This differentiation may by the results of biological interactions, occurring within a small spatial scale and/or abiotic factors acting at a larger scale. Mitochondrial markers revealed significant genetic structuring at spatial scales greater then 100 km showing the occurrence of a barrier to gene flow between northern and southern Tyrrhenian populations. These findings provide support for the establishment of marine protected areas in the deep sea and off-shore reefs, in order to effectively maintain genetic diversity of mesophotic red coral populations.

  6. Recommendation Systems for Geoscience Data Portals Built by Analyzing Usage Patterns

    Science.gov (United States)

    Crosby, C.; Nandigam, V.; Baru, C.

    2009-04-01

    selections. However, this paradigm has not yet been explored for geoscience data portals. In this presentation we will present an initial analysis of user interaction and access statistics for the GEON OpenTopography LiDAR data distribution and processing system to illustrate what they reveal about user's spatial and temporal data access patterns, data processing parameter selections, and pathways through the data portal. We also demonstrate what these usage statistics can illustrate about aspects of the data sets that are of greatest interest. Finally, we explore how these usage statistics could be used to improve the user's experience in the data portal and to optimize how data access interfaces and tools are designed and implemented.

  7. Spatial patterns and links between microbial community composition and function in cyanobacterial mats

    KAUST Repository

    Alnajjar, Mohammad Ahmad; Ramette, Alban; Kü hl, Michael; Hamza, Waleed; Klatt, Judith M.; Polerecky, Lubos

    2014-01-01

    We imaged reflectance and variable fluorescence in 25 cyanobacterial mats from four distant sites around the globe to assess, at different scales of resolution, spatial variabilities in the physiological parameters characterizing their photosynthetic capacity, including the absorptivity by chlorophyll a (Achl), maximum quantum yield of photosynthesis (Ymax), and light acclimation irradiance (Ik). Generally, these parameters significantly varied within individual mats on a sub-millimeter scale, with about 2-fold higher variability in the vertical than in the horizontal direction. The average vertical profiles of Ymax and Ik decreased with depth in the mat, while Achl exhibited a sub-surface maximum. The within-mat variability was comparable to, but often larger than, the between-sites variability, whereas the within-site variabilities (i.e., between samples from the same site) were generally lowest. When compared based on averaged values of their photosynthetic parameters, mats clustered according to their site of origin. Similar clustering was found when the community composition of the mats' cyanobacterial layers were compared by automated ribosomal intergenic spacer analysis (ARISA), indicating a significant link between the microbial community composition and function. Although this link is likely the result of community adaptation to the prevailing site-specific environmental conditions, our present data is insufficient to identify the main factors determining these patterns. Nevertheless, this study demonstrates that the spatial variability in the photosynthetic capacity and light acclimation of benthic phototrophic microbial communities is at least as large on a sub-millimeter scale as it is on a global scale, and suggests that this pattern of variability scaling is similar for the microbial community composition. © 2014 Al-Najjar, Ramette, Kühl, Hamza, Klatt and Polerecky.

  8. Temporal-Spatial Pattern of Carbon Stocks in Forest Ecosystems in Shaanxi, Northwest China.

    Directory of Open Access Journals (Sweden)

    Gaoyang Cui

    Full Text Available The precise and accurate quantitative evaluation of the temporal and spatial pattern of carbon (C storage in forest ecosystems is critical for understanding the role of forests in the global terrestrial C cycle and is essential for formulating forest management policies to combat climate change. In this study, we examined the C dynamics of forest ecosystems in Shaanxi, northwest China, based on four forest inventories (1989-1993, 1994-1998, 1999-2003, and 2004-2008 and field-sampling measurements (2012. The results indicate that the total C storage of forest ecosystems in Shaanxi increased by approximately 29.3%, from 611.72 Tg in 1993 to 790.75 Tg in 2008, partially as a result of ecological restoration projects. The spatial pattern of C storage in forest ecosystems mainly exhibited a latitude-zonal distribution across the province, increasing from north (high latitude to south (low latitude generally, which signifies the effect of environmental conditions, chiefly water and heat related factors, on forest growth and C sequestration. In addition, different data sources and estimation methods had a significant effect on the results obtained, with the C stocks in 2008 being considerably overestimated (864.55 Tg and slightly underestimated (778.07 Tg when measured using the mean C density method and integrated method, respectively. Overall, our results demonstrated that the forest ecosystem in Shaanxi acted as a C sink over the last few decades. However, further studies should be carried out with a focus on adaption of plants to environmental factors along with forest management for vegetation restoration to maximize the C sequestration potential and to better cope with climate change.

  9. Spatial patterns and links between microbial community composition and function in cyanobacterial mats

    KAUST Repository

    Alnajjar, Mohammad Ahmad

    2014-08-06

    We imaged reflectance and variable fluorescence in 25 cyanobacterial mats from four distant sites around the globe to assess, at different scales of resolution, spatial variabilities in the physiological parameters characterizing their photosynthetic capacity, including the absorptivity by chlorophyll a (Achl), maximum quantum yield of photosynthesis (Ymax), and light acclimation irradiance (Ik). Generally, these parameters significantly varied within individual mats on a sub-millimeter scale, with about 2-fold higher variability in the vertical than in the horizontal direction. The average vertical profiles of Ymax and Ik decreased with depth in the mat, while Achl exhibited a sub-surface maximum. The within-mat variability was comparable to, but often larger than, the between-sites variability, whereas the within-site variabilities (i.e., between samples from the same site) were generally lowest. When compared based on averaged values of their photosynthetic parameters, mats clustered according to their site of origin. Similar clustering was found when the community composition of the mats\\' cyanobacterial layers were compared by automated ribosomal intergenic spacer analysis (ARISA), indicating a significant link between the microbial community composition and function. Although this link is likely the result of community adaptation to the prevailing site-specific environmental conditions, our present data is insufficient to identify the main factors determining these patterns. Nevertheless, this study demonstrates that the spatial variability in the photosynthetic capacity and light acclimation of benthic phototrophic microbial communities is at least as large on a sub-millimeter scale as it is on a global scale, and suggests that this pattern of variability scaling is similar for the microbial community composition. © 2014 Al-Najjar, Ramette, Kühl, Hamza, Klatt and Polerecky.

  10. Sunlight Modulates Fruit Metabolic Profile and Shapes the Spatial Pattern of Compound Accumulation within the Grape Cluster.

    Science.gov (United States)

    Reshef, Noam; Walbaum, Natasha; Agam, Nurit; Fait, Aaron

    2017-01-01

    Vineyards are characterized by their large spatial variability of solar irradiance (SI) and temperature, known to effectively modulate grape metabolism. To explore the role of sunlight in shaping fruit composition and cluster uniformity, we studied the spatial pattern of incoming irradiance, fruit temperature and metabolic profile within individual grape clusters under three levels of sunlight exposure. The experiment was conducted in a vineyard of Cabernet Sauvignon cv. located in the Negev Highlands, Israel, where excess SI and midday temperatures are known to degrade grape quality. Filtering SI lowered the surface temperature of exposed fruits and increased the uniformity of irradiance and temperature in the cluster zone. SI affected the overall levels and patterns of accumulation of sugars, organic acids, amino acids and phenylpropanoids, across the grape cluster. Increased exposure to sunlight was associated with lower accumulation levels of malate, aspartate, and maleate but with higher levels of valine, leucine, and serine, in addition to the stress-related proline and GABA. Flavan-3-ols metabolites showed a negative response to SI, whereas flavonols were highly induced. The overall levels of anthocyanins decreased with increased sunlight exposure; however, a hierarchical cluster analysis revealed that the members of this family were grouped into three distinct accumulation patterns, with malvidin anthocyanins and cyanidin-glucoside showing contrasting trends. The flavonol-glucosides, quercetin and kaempferol, exhibited a logarithmic response to SI, leading to improved cluster uniformity under high-light conditions. Comparing the within-cluster variability of metabolite accumulation highlighted the stability of sugars, flavan-3-ols, and cinnamic acid metabolites to SI, in contrast to the plasticity of flavonols. A correlation-based network analysis revealed that extended exposure to SI modified metabolic coordination, increasing the number of negative

  11. Separation of spatial-temporal patterns ('climatic modes') by combined analysis of really measured and generated numerically vector time series

    Science.gov (United States)

    Feigin, A. M.; Mukhin, D.; Volodin, E. M.; Gavrilov, A.; Loskutov, E. M.

    2013-12-01

    The new method of decomposition of the Earth's climate system into well separated spatial-temporal patterns ('climatic modes') is discussed. The method is based on: (i) generalization of the MSSA (Multichannel Singular Spectral Analysis) [1] for expanding vector (space-distributed) time series in basis of spatial-temporal empirical orthogonal functions (STEOF), which makes allowance delayed correlations of the processes recorded in spatially separated points; (ii) expanding both real SST data, and longer by several times SST data generated numerically, in STEOF basis; (iii) use of the numerically produced STEOF basis for exclusion of 'too slow' (and thus not represented correctly) processes from real data. The application of the method allows by means of vector time series generated numerically by the INM RAS Coupled Climate Model [2] to separate from real SST anomalies data [3] two climatic modes possessing by noticeably different time scales: 3-5 and 9-11 years. Relations of separated modes to ENSO and PDO are investigated. Possible applications of spatial-temporal climatic patterns concept to prognosis of climate system evolution is discussed. 1. Ghil, M., R. M. Allen, M. D. Dettinger, K. Ide, D. Kondrashov, et al. (2002) "Advanced spectral methods for climatic time series", Rev. Geophys. 40(1), 3.1-3.41. 2. http://83.149.207.89/GCM_DATA_PLOTTING/GCM_INM_DATA_XY_en.htm 3. http://iridl.ldeo.columbia.edu/SOURCES/.KAPLAN/.EXTENDED/.v2/.ssta/

  12. Network based approaches reveal clustering in protein point patterns

    Science.gov (United States)

    Parker, Joshua; Barr, Valarie; Aldridge, Joshua; Samelson, Lawrence E.; Losert, Wolfgang

    2014-03-01

    Recent advances in super-resolution imaging have allowed for the sub-diffraction measurement of the spatial location of proteins on the surfaces of T-cells. The challenge is to connect these complex point patterns to the internal processes and interactions, both protein-protein and protein-membrane. We begin analyzing these patterns by forming a geometric network amongst the proteins and looking at network measures, such the degree distribution. This allows us to compare experimentally observed patterns to models. Specifically, we find that the experimental patterns differ from heterogeneous Poisson processes, highlighting an internal clustering structure. Further work will be to compare our results to simulated protein-protein interactions to determine clustering mechanisms.

  13. Spatially varying coefficient models in real estate: Eigenvector spatial filtering and alternative approaches

    NARCIS (Netherlands)

    Helbich, M; Griffith, D

    2016-01-01

    Real estate policies in urban areas require the recognition of spatial heterogeneity in housing prices to account for local settings. In response to the growing number of spatially varying coefficient models in housing applications, this study evaluated four models in terms of their spatial patterns

  14. Evaluating influence of active tectonics on spatial distribution pattern of floods along eastern Tamil Nadu, India

    Science.gov (United States)

    Selvakumar, R.; Ramasamy, SM.

    2014-12-01

    Flooding is a naturally recurrent phenomenon that causes severe damage to lives and property. Predictions on flood-prone zones are made based on intensity-duration of rainfall, carrying capacity of drainage, and natural or man-made obstructions. Particularly, the lower part of the drainage system and its adjacent geomorphic landforms like floodplains and deltaic plains are considered for analysis, but stagnation in parts of basins that are far away from major riverine systems is less unveiled. Similarly, uncharacteristic flooding in the upper and middle parts of drainage, especially in zones of an anomalous drainage pattern, is also least understood. Even though topographic differences are attributed for such anomalous spatial occurrence of floods, its genetic cause has to be identified for effective management practice. Added to structural and lithological variations, tectonic movements too impart micro-scale terrain undulations. Because active tectonic movements are slow-occurring, long-term geological processes, its resultant topographical variations and drainage anomalies are least correlated with floods. The recent floods of Tamil Nadu also exhibit a unique distribution pattern emphasizing the role of tectonics over it. Hence a detailed geoinformatics-based analysis was carried out to envisage the relationship between spatial distribution of flood and active tectonic elements such as regional arches and deeps, block faults, and graben and drainage anomalies such as deflected drainage, compressed meander, and eyed drainages. The analysis reveals that micro-scale topographic highs and lows imparted by active tectonic movements and its further induced drainage anomalies have substantially controlled the distribution pattern of flood.

  15. A study of spatial and temporal distribution of land utilization pattern in Mopka village using RS & GIS

    Directory of Open Access Journals (Sweden)

    Soni Prasoon

    2015-06-01

    Full Text Available Remote Sensing and GIS is a very good modality for retrospection and the strategy for better exploitation of sustainable land use system. The present study was conducted in the Bilaspur district for analyzing the spatial distribution of Land Use Change. During last decades the increasing population of Bilaspur city, affect the land use pattern of Mopka Village. The anthropogenic activities were affecting the agricultural land along with barren land. For the development of civic amenities the land of the above village was used. The main objective of the present study is to analyses the land use/land cover distribution in Mopka village, Bilaspur district in between last 12 years and to identify the main forces behind the changes. The objectives of present studies are, to create a land use land cover maps of Mopka village using satellite imagery. To analysis the temporal changes of village area in between the year 2000 and 2012, the primary, secondary and satellite data were used. The results of the present study show that the decadeial changes due to population growth and increasing demand of infrastructure were destroying the natural resources, natural habitat and soil structure of area.

  16. A framework for the assessment of the spatial and temporal patterns of threatened coastal delphinids.

    Science.gov (United States)

    Wang, Jingzhen; Yang, Yingting; Yang, Feng; Li, Yuelin; Li, Lianjie; Lin, Derun; He, Tangtian; Liang, Bo; Zhang, Tao; Lin, Yao; Li, Ping; Liu, Wenhua

    2016-01-25

    The massively accelerated biodiversity loss rate in the Anthropocene calls for an efficient and effective way to identify the spatial and temporal dynamics of endangered species. To this end, we developed a useful identification framework based on a case study of locally endangered Sousa chinensis by combining both LEK (local ecological knowledge) evaluation and regional boat-based survey methods. Our study investigated the basic ecological information of Sousa chinensis in the estuaries of eastern Guangdong that had previously been neglected, which could guide the future study and conservation. Based on the statistical testing of reported spatial and temporal dolphins sighting data from fishermen and the ecological monitoring analyses, including sighting rate, site fidelity and residence time estimations, some of the current Sousa chinensis units are likely to be geographically isolated and critically endangered, which calls for much greater conservation efforts. Given the accelerated population extinction rate and increasing budgetary constraints, our survey pattern can be applied in a timely and economically acceptable manner to the spatial and temporal assessment of other threatened coastal delphinids, particularly when population distributions are on a large scale and traditional sampling methods are difficult to implement.

  17. Patterns of Spatial Variation of Assemblages Associated with Intertidal Rocky Shores: A Global Perspective

    Science.gov (United States)

    Cruz-Motta, Juan José; Miloslavich, Patricia; Palomo, Gabriela; Iken, Katrin; Konar, Brenda; Pohle, Gerhard; Trott, Tom; Benedetti-Cecchi, Lisandro; Herrera, César; Hernández, Alejandra; Sardi, Adriana; Bueno, Andrea; Castillo, Julio; Klein, Eduardo; Guerra-Castro, Edlin; Gobin, Judith; Gómez, Diana Isabel; Riosmena-Rodríguez, Rafael; Mead, Angela; Bigatti, Gregorio; Knowlton, Ann; Shirayama, Yoshihisa

    2010-01-01

    Assemblages associated with intertidal rocky shores were examined for large scale distribution patterns with specific emphasis on identifying latitudinal trends of species richness and taxonomic distinctiveness. Seventy-two sites distributed around the globe were evaluated following the standardized sampling protocol of the Census of Marine Life NaGISA project (www.nagisa.coml.org). There were no clear patterns of standardized estimators of species richness along latitudinal gradients or among Large Marine Ecosystems (LMEs); however, a strong latitudinal gradient in taxonomic composition (i.e., proportion of different taxonomic groups in a given sample) was observed. Environmental variables related to natural influences were strongly related to the distribution patterns of the assemblages on the LME scale, particularly photoperiod, sea surface temperature (SST) and rainfall. In contrast, no environmental variables directly associated with human influences (with the exception of the inorganic pollution index) were related to assemblage patterns among LMEs. Correlations of the natural assemblages with either latitudinal gradients or environmental variables were equally strong suggesting that neither neutral models nor models based solely on environmental variables sufficiently explain spatial variation of these assemblages at a global scale. Despite the data shortcomings in this study (e.g., unbalanced sample distribution), we show the importance of generating biological global databases for the use in large-scale diversity comparisons of rocky intertidal assemblages to stimulate continued sampling and analyses. PMID:21179546

  18. Patterns of spatial variation of assemblages associated with intertidal rocky shores: a global perspective.

    Directory of Open Access Journals (Sweden)

    Juan José Cruz-Motta

    2010-12-01

    Full Text Available Assemblages associated with intertidal rocky shores were examined for large scale distribution patterns with specific emphasis on identifying latitudinal trends of species richness and taxonomic distinctiveness. Seventy-two sites distributed around the globe were evaluated following the standardized sampling protocol of the Census of Marine Life NaGISA project (www.nagisa.coml.org. There were no clear patterns of standardized estimators of species richness along latitudinal gradients or among Large Marine Ecosystems (LMEs; however, a strong latitudinal gradient in taxonomic composition (i.e., proportion of different taxonomic groups in a given sample was observed. Environmental variables related to natural influences were strongly related to the distribution patterns of the assemblages on the LME scale, particularly photoperiod, sea surface temperature (SST and rainfall. In contrast, no environmental variables directly associated with human influences (with the exception of the inorganic pollution index were related to assemblage patterns among LMEs. Correlations of the natural assemblages with either latitudinal gradients or environmental variables were equally strong suggesting that neither neutral models nor models based solely on environmental variables sufficiently explain spatial variation of these assemblages at a global scale. Despite the data shortcomings in this study (e.g., unbalanced sample distribution, we show the importance of generating biological global databases for the use in large-scale diversity comparisons of rocky intertidal assemblages to stimulate continued sampling and analyses.

  19. On Identifying Useful Patterns to Analyze Products in Retail Transaction Databases

    Science.gov (United States)

    Yun, Unil

    Mining correlated patterns in large transaction databases is one of the essential tasks in data mining since a huge number of patterns are usually mined, but it is hard to find patterns with the correlation. The needed data analysis should be made according to the requirements of the particular real application. In previous mining approaches, patterns with the weak affinity are found even with a high minimum support. In this paper, we suggest weighted support affinity pattern mining in which a new measure, weighted support confidence (ws-confidence) is developed to identify correlated patterns with the weighted support affinity. To efficiently prune the weak affinity patterns, we prove that the ws-confidence measure satisfies the anti-monotone and cross weighted support properties which can be applied to eliminate patterns with dissimilar weighted support levels. Based on the two properties, we develop a weighted support affinity pattern mining algorithm (WSP). The weighted support affinity patterns can be useful to answer the comparative analysis queries such as finding itemsets containing items which give similar total selling expense levels with an acceptable error range α% and detecting item lists with similar levels of total profits. In addition, our performance study shows that WSP is efficient and scalable for mining weighted support affinity patterns.

  20. Crime Pattern Analysis: A Spatial Frequent Pattern Mining Approach

    Science.gov (United States)

    2012-05-10

    econometrics. A companion to theoretical econometrics, pages 310-330, 1988. [5] L. Anselin, J. Cohen, D. Cook, W. Gorr, and G. Tita . Spatial analyses...52] G. Mohler, M. Short, P. Brantingham, F. Schoenberg, and G. Tita . Self-exciting point process modeling of crime. Journal of the American...Systems, 9:462, 2010. [69] M. Short, P. Brantingham, A. Bertozzi, and G. Tita . Dissipation and displacement of hotspots in reaction-diffusion models

  1. The impact of spatial resolution on resolving spatial precipitation patterns in the Himalayas

    OpenAIRE

    Bonekamp, P.N.J.; Collier, S.E.; Immerzeel, W.W.

    2017-01-01

    Frequently used gridded meteorological datasets poorly represent precipitation in the Himalaya due to their relatively low spatial resolution and the associated coarse representation of the complex topography. Dynamical downscaling using high-resolution atmospheric models may improve the accuracy and quality of the precipitation fields, as simulations at higher spatial resolution are more capable of resolving the interaction between the topography and the atmosphere. However, most physics par...

  2. Application of frequent itemsets mining to analyze patterns of one-stop visits in Taiwan.

    Directory of Open Access Journals (Sweden)

    Chun-Yi Tu

    Full Text Available BACKGROUND: The free choice of health care facilities without limitations on frequency of visits within the National Health Insurance in Taiwan gives rise to not only a high number of annual ambulatory visits per capita but also a unique "one-stop shopping"phenomenon, which refers to a patient' visits to several specialties of the same healthcare facility in one day. The visits to multiple physicians would increase the potential risk of polypharmacy. The aim of this study was to analyze the frequency and patterns of one-stop visits in Taiwan. METHODOLOGY/PRINCIPAL FINDINGS: The claims datasets of 1 million nationally representative people within Taiwan's National Health Insurance in 2005 were used to calculate the number of patients with one-stop visits. The frequent itemsets mining was applied to compute the combination patterns of specialties in the one-stop visits. Among the total 13,682,469 ambulatory care visits in 2005, one-stop visits occurred 144,132 times and involved 296,822 visits (2.2% of all visits by 66,294 (6.6% persons. People tended to have this behavior with age and the percentage reached 27.5% (5,662 in 20,579 in the age group ≥80 years. In general, women were more likely to have one-stop visits than men (7.2% vs. 6.0%. Internal medicine plus ophthalmology was the most frequent combination with a visited frequency of 3,552 times (2.5%, followed by cardiology plus neurology with 3,183 times (2.2%. The most frequent three-specialty combination, cardiology plus neurology and gastroenterology, occurred only 111 times. CONCLUSIONS/SIGNIFICANCE: Without the novel computational technique, it would be hardly possible to analyze the extremely diverse combination patterns of specialties in one-stop visits. The results of the study could provide useful information either for the hospital manager to set up integrated services or for the policymaker to rebuild the health care system.

  3. Location, location, location: Assessing the spatial patterning between marijuana licenses, alcohol outlets and neighborhood characteristics within Washington state.

    Science.gov (United States)

    Tabb, Loni Philip; Fillmore, Christina; Melly, Steven

    2018-04-01

    The availability of marijuana products is becoming increasingly prevalent across the United States (US), many states are allowing for the production, processing, and retailing of these products for medical and/or recreational use. The purpose of this study is to: (1) examine the spatial patterning of marijuana licenses, and (2) examine the impact of alcohol outlets in addition to other neighborhood characteristics on marijuana licenses within the state of Washington. This cross-sectional observational study examined 1458 census tracts in Washington state from 2017, using marijuana and alcohol data from the Washington State Liquor and Cannabis Board as well as neighborhood characteristics data from the American Community Survey 2011-2015 5-year estimates. We used exploratory and formal spatial regression methods, including integrated nested Laplace approximation within a Bayesian statistical framework, to address the study aims. Our results indicate there is significant spatial patterning of marijuana producers and processors across the state. We also found that all marijuana licenses are located in poorer census tracts, and marijuana retailers are co-located in census tracts with off-premises alcohol outlets. Our study provides empirical evidence of the relationship between marijuana licenses, alcohol outlets, and neighborhood characteristics, and has important implications for policymakers in other states currently considering legalizing marijuana-products for medical and/or recreational use. Copyright © 2018 Elsevier B.V. All rights reserved.

  4. Spatial Patterns in Biogeochemical Processes During Peak Growing Season in Oiled and Unoiled Louisiana Salt Marshes: A Multi-Year Analysis

    Science.gov (United States)

    Chelsky, A.; Marton, J. M.; Bernhard, A. E.; Giblin, A. E.; Setta, S. P.; Hill, T. D.; Roberts, B. J.

    2016-02-01

    Louisiana salt marshes are important sites for carbon and nitrogen cycling because they can mitigate fluxes of nutrients and carbon to the Gulf of Mexico where a large hypoxic zone develops annually. The aim of this study was to investigate spatial and temporal patterns of biogeochemical processes in Louisiana coastal wetlands during peak growing season, and to investigate whether the Deepwater Horizon oil spill resulted in persistent changes to these rates. We measured nitrification potential and sediment characteristics at two pairs of oiled/unoiled marshes in three regions across the Louisiana coast (Terrebonne and east and west Barataria Bay) in July from 2012 to 2015, with plots along a gradient from the salt marsh edge to the interior. Rates of nitrification potential across the coast (overall mean of 901 ± 115 nmol gdw-1 d-1 from 2012-2014) were high compared to other published rates for salt marshes but displayed high variability at the plot level (4 orders of magnitude). Within each region interannual means varied by factors of 2-5. Nitrification potential did not differ with oiling history, but did display consistent spatial patterns within each region that corresponded to changes in relative elevation and inundation, which influence patterns of soil properties and microbial communities. In 2015, we also measured greenhouse gas (CO2, N2O and CH4) production and denitrification enzyme activity rates in addition to nitrification potential across the region to investigate spatial relationships between these processes.

  5. Spatial patterning and persistence of meltwater on ice shelves and the implications for ice shelf collapse

    Science.gov (United States)

    Robel, A.; MacAyeal, D. R.; Tsai, V. C.; Shean, D. E.

    2017-12-01

    Observations indicate that for at least the last few decades, there has been extensive surface melting over ice shelves in Antarctica. Meltwater either collects in ponds or flows over the surface in streams that discharge to the ocean. The spatial organization and persistence of this meltwater can have a significant influence on the thermomechanical ice shelf state through albedo, turbulent heat exchange, refreezing and hydrofracture. However, as more meltwater forms on Antarctic ice shelves, there is no general theory that predicts the spatial pattern of meltwater ponded on the ice shelf surface and the volume of meltwater runoff to the ocean. Here, we show how dynamical systems tools, such as cellular automata, can be used to calculate the expected distribution of meltwater on ice shelf surfaces. These tools can also be used to explore how ice shelf surface morphology is modified by meltwater albedo and turbulent heating feedbacks. We apply these numerical approaches to new high-resolution digital elevation models for ice shelves in West Antarctica. Additionally, we survey the prospects of developing general rules of meltwater patterning by applying scaling approaches from percolation theory. We conclude by discussing the types of ice shelves that are more likely to cause ice shelf collapse through surface melt-induced hydrofracture or thermomechanical weakening.

  6. Optimization of the kernel functions in a probabilistic neural network analyzing the local pattern distribution.

    Science.gov (United States)

    Galleske, I; Castellanos, J

    2002-05-01

    This article proposes a procedure for the automatic determination of the elements of the covariance matrix of the gaussian kernel function of probabilistic neural networks. Two matrices, a rotation matrix and a matrix of variances, can be calculated by analyzing the local environment of each training pattern. The combination of them will form the covariance matrix of each training pattern. This automation has two advantages: First, it will free the neural network designer from indicating the complete covariance matrix, and second, it will result in a network with better generalization ability than the original model. A variation of the famous two-spiral problem and real-world examples from the UCI Machine Learning Repository will show a classification rate not only better than the original probabilistic neural network but also that this model can outperform other well-known classification techniques.

  7. Spatial arrangement of faults and opening-mode fractures

    Science.gov (United States)

    Laubach, S. E.; Lamarche, J.; Gauthier, B. D. M.; Dunne, W. M.; Sanderson, David J.

    2018-03-01

    Spatial arrangement is a fundamental characteristic of fracture arrays. The pattern of fault and opening-mode fracture positions in space defines structural heterogeneity and anisotropy in a rock volume, governs how faults and fractures affect fluid flow, and impacts our understanding of the initiation, propagation and interactions during the formation of fracture patterns. This special issue highlights recent progress with respect to characterizing and understanding the spatial arrangements of fault and fracture patterns, providing examples over a wide range of scales and structural settings. Five papers describe new methods and improvements of existing techniques to quantify spatial arrangement. One study unravels the time evolution of opening-mode fracture spatial arrangement, which are data needed to compare natural patterns with progressive fracture growth in kinematic and mechanical models. Three papers investigate the role of evolving diagenesis in localizing fractures by mechanical stratigraphy and nine discuss opening-mode fracture spatial arrangement. Two papers show the relevance of complex cluster patterns to unconventional reservoirs through examples of fractures in tight gas sandstone horizontal wells, and a study of fracture arrangement in shale. Four papers demonstrate the roles of folds in fracture localization and the development spatial patterns. One paper models along-fault friction and fluid pressure and their effects on fault-related fracture arrangement. Contributions address deformation band patterns in carbonate rocks and fault size and arrangement above a detachment fault. Three papers describe fault and fracture arrangements in basement terrains, and three document fracture patterns in shale. This collection of papers points toward improvement in field methods, continuing improvements in computer-based data analysis and creation of synthetic fracture patterns, and opportunities for further understanding fault and fracture attributes in

  8. Spatial-temporal changes of maximum and minimum temperatures in the Wei River Basin, China: Changing patterns, causes and implications

    Science.gov (United States)

    Liu, Saiyan; Huang, Shengzhi; Xie, Yangyang; Huang, Qiang; Leng, Guoyong; Hou, Beibei; Zhang, Ying; Wei, Xiu

    2018-05-01

    Due to the important role of temperature in the global climate system and energy cycles, it is important to investigate the spatial-temporal change patterns, causes and implications of annual maximum (Tmax) and minimum (Tmin) temperatures. In this study, the Cloud model were adopted to fully and accurately analyze the changing patterns of annual Tmax and Tmin from 1958 to 2008 by quantifying their mean, uniformity, and stability in the Wei River Basin (WRB), a typical arid and semi-arid region in China. Additionally, the cross wavelet analysis was applied to explore the correlations among annual Tmax and Tmin and the yearly sunspots number, Arctic Oscillation, Pacific Decadal Oscillation, and soil moisture with an aim to determine possible causes of annual Tmax and Tmin variations. Furthermore, temperature-related impacts on vegetation cover and precipitation extremes were also examined. Results indicated that: (1) the WRB is characterized by increasing trends in annual Tmax and Tmin, with a more evident increasing trend in annual Tmin, which has a higher dispersion degree and is less uniform and stable than annual Tmax; (2) the asymmetric variations of Tmax and Tmin can be generally explained by the stronger effects of solar activity (primarily), large-scale atmospheric circulation patterns, and soil moisture on annual Tmin than on annual Tmax; and (3) increasing annual Tmax and Tmin have exerted strong influences on local precipitation extremes, in terms of their duration, intensity, and frequency in the WRB. This study presents new analyses of Tmax and Tmin in the WRB, and the findings may help guide regional agricultural production and water resources management.

  9. Context-aware pattern discovery for moving object trajectories

    Science.gov (United States)

    Sharif, Mohammad; Asghar Alesheikh, Ali; Kaffash Charandabi, Neda

    2018-05-01

    Movement of point objects are highly sensitive to the underlying situations and conditions during the movement, which are known as contexts. Analyzing movement patterns, while accounting the contextual information, helps to better understand how point objects behave in various contexts and how contexts affect their trajectories. One potential solution for discovering moving objects patterns is analyzing the similarities of their trajectories. This article, therefore, contextualizes the similarity measure of trajectories by not only their spatial footprints but also a notion of internal and external contexts. The dynamic time warping (DTW) method is employed to assess the multi-dimensional similarities of trajectories. Then, the results of similarity searches are utilized in discovering the relative movement patterns of the moving point objects. Several experiments are conducted on real datasets that were obtained from commercial airplanes and the weather information during the flights. The results yielded the robustness of DTW method in quantifying the commonalities of trajectories and discovering movement patterns with 80 % accuracy. Moreover, the results revealed the importance of exploiting contextual information because it can enhance and restrict movements.

  10. Spatial distribution of 12 class B notifiable infectious diseases in China: A retrospective study.

    Science.gov (United States)

    Zhu, Bin; Fu, Yang; Liu, Jinlin; Mao, Ying

    2018-01-01

    China is the largest developing country with a relatively developed public health system. To further prevent and eliminate the spread of infectious diseases, China has listed 39 notifiable infectious diseases characterized by wide prevalence or great harm, and classified them into classes A, B, and C, with severity decreasing across classes. Class A diseases have been almost eradicated in China, thus making class B diseases a priority in infectious disease prevention and control. In this retrospective study, we analyze the spatial distribution patterns of 12 class B notifiable infectious diseases that remain active all over China. Global and local Moran's I and corresponding graphic tools are adopted to explore and visualize the global and local spatial distribution of the incidence of the selected epidemics, respectively. Inter-correlations of clustering patterns of each pair of diseases and a cumulative summary of the high/low cluster frequency of the provincial units are also provided by means of figures and maps. Of the 12 most commonly notifiable class B infectious diseases, viral hepatitis and tuberculosis show high incidence rates and account for more than half of the reported cases. Almost all the diseases, except pertussis, exhibit positive spatial autocorrelation at the provincial level. All diseases feature varying spatial concentrations. Nevertheless, associations exist between spatial distribution patterns, with some provincial units displaying the same type of cluster features for two or more infectious diseases. Overall, high-low (unit with high incidence surrounded by units with high incidence, the same below) and high-high spatial cluster areas tend to be prevalent in the provincial units located in western and southwest China, whereas low-low and low-high spatial cluster areas abound in provincial units in north and east China. Despite the various distribution patterns of 12 class B notifiable infectious diseases, certain similarities between

  11. Mistletoe effects on Scots pine decline following drought events: insights from within-tree spatial patterns, growth and carbohydrates.

    Science.gov (United States)

    Sangüesa-Barreda, Gabriel; Linares, Juan Carlos; Camarero, J Julio

    2012-05-01

    Forest decline has been attributed to the interaction of several stressors including biotic factors such as mistletoes and climate-induced drought stress. However, few data exist on how mistletoes are spatially arranged within trees and how this spatial pattern is related to changes in radial growth, responses to drought stress and carbon use. We used dendrochronology to quantify how mistletoe (Viscum album L.) infestation and drought stress affected long-term growth patterns in Pinus sylvestris L. at different heights. Basal area increment (BAI) trends and comparisons between trees of three different infestation degrees (without mistletoe, ID1; moderately infested trees, ID2; and severely infested trees, ID3) were performed using linear mixed-effects models. To identify the main climatic drivers of tree growth tree-ring widths were converted into indexed chronologies and related to climate data using correlation functions. We performed spatial analyses of the 3D distribution of mistletoe individuals and their ages within the crowns of three severely infested pines to describe their patterns. Lastly, we quantified carbohydrate and nitrogen concentrations in needles and sapwood of branches from severely infested trees and from trees without mistletoe. Mistletoe individuals formed strongly clustered groups of similar age within tree crowns and their age increased towards the crown apex. Mistletoe infestation negatively impacted growth but this effect was stronger near the tree apex than in the rest of sampled heights, causing an average loss of 64% in BAI (loss of BAI was ∼51% at 1.3 m or near the tree base). We found that BAI of severely infested trees and moderately or non-infested trees diverged since 2001 and such divergence was magnified by drought. Infested trees had lower concentrations of soluble sugars in their needles than non-infested ones. We conclude that mistletoe infestation causes growth decline and increases the sensitivity of trees to drought

  12. Spatial patterns in gravel habitats and communities in the central and eastern English Channel

    Science.gov (United States)

    Coggan, Roger; Barrio Froján, Christopher R. S.; Diesing, Markus; Aldridge, John

    2012-10-01

    The distribution of sediment type and benthic communities in the central and eastern English Channel is shown to be polarised around a distinctive local hydrodynamic feature. The seabed in the region includes an extensive area of gravel substrate which is both an important habitat for benthic marine fauna and a valuable source of material for the marine aggregate industry. Effective management of the area is predicated on an understanding of whether it represents a single homogeneous unit, or several different units that may need to be managed in different ways. The aim of this study was to provide information that would inform such management decisions. Spatial patterns in gravel habitats and communities were studied by investigating the physical environment through modelled and empirical data, and the distribution of infauna and epifauna along an east-west trending transect. A common spatial pattern was observed in both physical and biological parameters, but rather than indicating a simple longitudinal gradient, there was a distinct polarisation around a central feature, a bedload parting (BLP) zone situated between the Isle of Wight and Cotentin peninsula. Sediments and communities at the eastern and western ends of the transect were more similar to each other than to those in the middle. The strong hydrodynamic regime in the BLP area controls sediment distribution, transporting finer material, mainly sand, away from the mid transect area. The pattern in sand content of the substrate mirrors the magnitude of the potential bedload transport, which is complex in this region due to the interplay between the M2 and M4 tidal constituents and produced a series of erosional and depositional zones. The structure of benthic communities reflected the local substrate and hydrodynamic conditions, with sponges observed among the stable substrates and stronger currents that characterised the mid transect area, while infauna became more diverse towards the ends of the

  13. High cell density suppresses BMP4-induced differentiation of human pluripotent stem cells to produce macroscopic spatial patterning in a unidirectional perfusion culture chamber.

    Science.gov (United States)

    Tashiro, Shota; Le, Minh Nguyen Tuyet; Kusama, Yuta; Nakatani, Eri; Suga, Mika; Furue, Miho K; Satoh, Taku; Sugiura, Shinji; Kanamori, Toshiyuki; Ohnuma, Kiyoshi

    2018-04-19

    Spatial pattern formation is a critical step in embryogenesis. Bone morphogenetic protein 4 (BMP4) and its inhibitors are major factors for the formation of spatial patterns during embryogenesis. However, spatial patterning of the human embryo is unclear because of ethical issues and isotropic culture environments resulting from conventional culture dishes. Here, we utilized human pluripotent stem cells (hiPSCs) and a simple anisotropic (unidirectional perfusion) culture chamber, which creates unidirectional conditions, to measure the cell community effect. The influence of cell density on BMP4-induced differentiation was explored during static culture using a conventional culture dish. Immunostaining of the early differentiation marker SSEA-1 and the mesendoderm marker BRACHYURY revealed that high cell density suppressed differentiation, with small clusters of differentiated and undifferentiated cells formed. Addition of five-fold higher concentration of BMP4 showed similar results, suggesting that suppression was not caused by depletion of BMP4 but rather by high cell density. Quantitative RT-PCR array analysis showed that BMP4 induced multi-lineage differentiation, which was also suppressed under high-density conditions. We fabricated an elongated perfusion culture chamber, in which proteins were transported unidirectionally, and hiPSCs were cultured with BMP4. At low density, the expression was the same throughout the chamber. However, at high density, SSEA-1 and BRACHYURY were expressed only in upstream cells, suggesting that some autocrine/paracrine factors inhibited the action of BMP4 in downstream cells to form the spatial pattern. Human iPSCs cultured in a perfusion culture chamber might be useful for studying in vitro macroscopic pattern formation in human embryogenesis. Copyright © 2018 The Society for Biotechnology, Japan. Published by Elsevier B.V. All rights reserved.

  14. Interaction of valleys and circulation patterns (CPs on spatial precipitation patterns in southern Germany

    Directory of Open Access Journals (Sweden)

    M. Liu

    2013-11-01

    Full Text Available Topography exerts influence on the spatial precipitation distribution over different scales, known typically at the large scale as the orographic effect, and at the small scale as the wind-drift rainfall (WDR effect. At the intermediate scale (1~10 km, which is characterized by secondary mountain valleys, topography also demonstrates some effect on the precipitation pattern. This paper investigates such intermediate-scale topographic effects on precipitation patterns, focusing on narrow-steep valleys in the complex terrain of southern Germany, based on the daily observations over a 48 yr period (1960~2007 from a high-density rain-gauge network covering two sub-areas, Baden-Wuerttemberg (BW and Bavaria (BY. Precipitation data at the valley and non-valley stations are compared under consideration of the daily general circulation patterns (CPs classified by a fuzzy rule-based algorithm. Scatter plots of precipitation against elevation demonstrate a different behavior of valley stations comparing to non-valley stations. A detailed study of the precipitation time series for selected station triplets, each consisting of a valley station, a mountain station and an open station have been investigated by statistical analysis with the Kolmogorov–Smirnov (KS test supplemented by the One-way analysis of variance (One-way ANOVA and a graphical comparison of the mean precipitation amounts. The results show an interaction of valley orientation and the direction of the CPs at the intermediate scale, i.e. when the valley is shielded from the CP which carries the precipitation, the precipitation amount within the valley is comparable to that on the mountain crest, and both larger than the precipitation at the open station. When the valley is open to the CP, the precipitation within the valley is similar to the open station but much less than that on the mountain. Such phenomenon where the precipitation is "blind" to the valleys at the intermediate scale

  15. Effects of nitrogen on temporal and spatial patterns of nitrate in streams and soil solution of a central hardwood forest

    Science.gov (United States)

    Frank S. Gilliam; Mary Beth. Adams

    2011-01-01

    This study examined changes in stream and soil water NO3- and their relationship to temporal and spatial patterns of NO3- in soil solution of watersheds at the Fernow Experimental Forest, West Virginia. Following tenfold increases in stream NO3

  16. Spatial and temporal patterns of global onshore wind speed distribution

    International Nuclear Information System (INIS)

    Zhou, Yuyu; Smith, Steven J

    2013-01-01

    Wind power, a renewable energy source, can play an important role in electrical energy generation. Information regarding wind energy potential is important both for energy related modeling and for decision-making in the policy community. While wind speed datasets with high spatial and temporal resolution are often ultimately used for detailed planning, simpler assumptions are often used in analysis work. An accurate representation of the wind speed frequency distribution is needed in order to properly characterize wind energy potential. Using a power density method, this study estimated global variation in wind parameters as fitted to a Weibull density function using NCEP/climate forecast system reanalysis (CFSR) data over land areas. The Weibull distribution performs well in fitting the time series wind speed data at most locations according to R 2 , root mean square error, and power density error. The wind speed frequency distribution, as represented by the Weibull k parameter, exhibits a large amount of spatial variation, a regionally varying amount of seasonal variation, and relatively low decadal variation. We also analyzed the potential error in wind power estimation when a commonly assumed Rayleigh distribution (Weibull k = 2) is used. We find that the assumption of the same Weibull parameter across large regions can result in non-negligible errors. While large-scale wind speed data are often presented in the form of mean wind speeds, these results highlight the need to also provide information on the wind speed frequency distribution. (letter)

  17. Spatial Memory for Patterns of Taps on the Fingers.

    Science.gov (United States)

    Markel, Paul D

    2015-01-01

    Ongoing development of haptic technology has the potential to provide significant improvement in safety and performance in demanding environments where vision and hearing are compromised. Research regarding the cognitive psychology of touch is lacking and could be beneficial in the development of expectations about human performance for the refinement and implementation of haptic technology. This study examines haptic-spatial memory using a novel assessment method based on finger anatomy. In addition, evidence is presented for a serial-position effect for haptic-spatial memory that is analogous to the classic serial-position effect demonstrated in the verbal recall of word lists. Finally, haptic-spatial memory is compared with short- and long-term memory for visual-spatial tasks.

  18. Understanding the effects of predictability, duration, and spatial pattern of drying on benthic invertebrate assemblages in two contrasting intermittent streams

    Science.gov (United States)

    von Schiller, Daniel; Barberá, Gonzalo G.; Díaz, Angela M.; Arce, Maria Isabel; del Campo, Rubén; Tockner, Klement

    2018-01-01

    In the present study, we examined the effects of different drying conditions on the composition, structure and function of benthic invertebrate assemblages. We approached this objective by comparing invertebrate assemblages in perennial and intermittent sites along two intermittent Mediterranean streams with contrasting predictability, duration, and spatial patterns of drying: Fuirosos (high predictability, short duration, downstream drying pattern) and Rogativa (low predictability, long duration, patchy drying pattern). Specifically, we quantified the contribution of individual taxa to those differences, the degree of nestedness, and shifts in the composition, structure and function of benthic invertebrate assemblages along flow intermittence gradients. We observed greater effects of drying on the benthic invertebrate composition in Fuirosos than in Rogativa, resulting in a higher dissimilarity of assemblages between perennial and intermittent sites, as well as a lower degree of nestedness. Furthermore, a higher number of biotic metrics related to richness, abundance and biological traits were significantly different between perennial and intermittent sites in Fuirosos, despite a shorter dry period compared to Rogativa. At the same time, slightly different responses were detected during post-drying (autumn) than pre-drying (spring) conditions in this stream. In Rogativa, shifts in benthic invertebrate assemblages along increasing gradients of flow intermittence were found for three metrics (Ephemeroptera, Plecoptera and Trichoptera (EPT) and Odonata, Coleoptera and Heteroptera (OCH) abundances and aerial active dispersal. Furthermore, we demonstrated that combined gradients of dry period duration and distance to nearest perennial reach can generate complex, and different, responses of benthic invertebrate assemblages, depending on the flow intermittence metric. Our study advances the notion that special attention should be paid to the predictability, duration and

  19. Spatial patterns of fetal loss and infant death in an arsenic-affected area in Bangladesh

    Directory of Open Access Journals (Sweden)

    Streatfield Peter

    2010-10-01

    Full Text Available Abstract Background Arsenic exposure in pregnancy is associated with adverse pregnancy outcome and infant mortality. Knowledge of the spatial characteristics of the outcomes and their possible link to arsenic exposure are important for planning effective mitigation activities. The aim of this study was to identify spatial and spatiotemporal clustering of fetal loss and infant death, and spatial relationships between high and low clusters of fetal loss and infant death rates and high and low clusters of arsenic concentrations in tube-well water used for drinking. Methods Pregnant women from Matlab, Bangladesh, who used tube-well water for drinking while pregnant between 1991 and 2000, were included in this study. In total 29,134 pregnancies were identified. A spatial scan test was used to identify unique non-random spatial and spatiotemporal clusters of fetal loss and infant death using a retrospective spatial and spatiotemporal permutation and Poisson probability models. Results Two significant clusters of fetal loss and infant death were identified and these clusters remained stable after adjustment for covariates. One cluster of higher rates of fetal loss and infant death was in the vicinity of the Meghna River, and the other cluster of lower rates was in the center of Matlab. The average concentration of arsenic in the water differed between these clusters (319 μg/L for the high cluster and 174 μg/L for the low cluster. The spatial patterns of arsenic concentrations in tube-well water were found to be linked with the adverse pregnancy outcome clusters. In the spatiotemporal analysis, only one high fetal loss and infant death cluster was identified in the same high cluster area obtained from purely spatial analysis. However, the cluster was no longer significant after adjustment for the covariates. Conclusion The finding of this study suggests that given the geographical variation in tube-well water contamination, higher fetal loss and

  20. Large-scale spatial distribution patterns of gastropod assemblages in rocky shores.

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    Patricia Miloslavich

    Full Text Available Gastropod assemblages from nearshore rocky habitats were studied over large spatial scales to (1 describe broad-scale patterns in assemblage composition, including patterns by feeding modes, (2 identify latitudinal pattern of biodiversity, i.e., richness and abundance of gastropods and/or regional hotspots, and (3 identify potential environmental and anthropogenic drivers of these assemblages. Gastropods were sampled from 45 sites distributed within 12 Large Marine Ecosystem regions (LME following the NaGISA (Natural Geography in Shore Areas standard protocol (www.nagisa.coml.org. A total of 393 gastropod taxa from 87 families were collected. Eight of these families (9.2% appeared in four or more different LMEs. Among these, the Littorinidae was the most widely distributed (8 LMEs followed by the Trochidae and the Columbellidae (6 LMEs. In all regions, assemblages were dominated by few species, the most diverse and abundant of which were herbivores. No latitudinal gradients were evident in relation to species richness or densities among sampling sites. Highest diversity was found in the Mediterranean and in the Gulf of Alaska, while highest densities were found at different latitudes and represented by few species within one genus (e.g. Afrolittorina in the Agulhas Current, Littorina in the Scotian Shelf, and Lacuna in the Gulf of Alaska. No significant correlation was found between species composition and environmental variables (r≤0.355, p>0.05. Contributing variables to this low correlation included invasive species, inorganic pollution, SST anomalies, and chlorophyll-a anomalies. Despite data limitations in this study which restrict conclusions in a global context, this work represents the first effort to sample gastropod biodiversity on rocky shores using a standardized protocol across a wide scale. Our results will generate more work to build global databases allowing for large-scale diversity comparisons of rocky intertidal assemblages.

  1. Human Mobility Patterns and Cholera Epidemics: a Spatially Explicit Modeling Approach

    Science.gov (United States)

    Mari, L.; Bertuzzo, E.; Righetto, L.; Casagrandi, R.; Gatto, M.; Rodriguez-Iturbe, I.; Rinaldo, A.

    2010-12-01

    Cholera is an acute enteric disease caused by the ingestion of water or food contaminated by the bacterium Vibrio cholerae. Although most infected individuals do not develop severe symptoms, their stool may contain huge quantities of V.~cholerae cells. Therefore, while traveling or commuting, asymptomatic carriers can be responsible for the long-range dissemination of the disease. As a consequence, human mobility is an alternative and efficient driver for the spread of cholera, whose primary propagation pathway is hydrological transport through river networks. We present a multi-layer network model that accounts for the interplay between epidemiological dynamics, hydrological transport and long-distance dissemination of V.~cholerae due to human movement. In particular, building on top of state-of-the-art spatially explicit models for cholera spread through surface waters, we describe human movement and its effects on the propagation of the disease by means of a gravity-model approach borrowed from transportation theory. Gravity-like contact processes have been widely used in epidemiology, because they can satisfactorily depict human movement when data on actual mobility patterns are not available. We test our model against epidemiological data recorded during the cholera outbreak occurred in the KwaZulu-Natal province of South Africa during years 2000--2001. We show that human mobility does actually play an important role in the formation of the spatiotemporal patterns of cholera epidemics. In particular, long-range human movement may determine inter-catchment dissemination of V.~cholerae cells, thus in turn explaining the emergence of epidemic patterns that cannot be produced by hydrological transport alone. We also show that particular attention has to be devoted to study how heterogeneously distributed drinking water supplies and sanitation conditions may affect cholera transmission.

  2. Spatial patterns of soil organic carbon stocks in Estonian arable soils

    Science.gov (United States)

    Suuster, Elsa; Astover, Alar; Kõlli, Raimo; Roostalu, Hugo; Reintam, Endla; Penu, Priit

    2010-05-01

    Soil organic carbon (SOC) determines ecosystem functions, influencing soil fertility, soil physical, chemical and biological properties and crop productivity. Therefore the spatial pattern of SOC stocks and its appropriate management is important at various scales. Due to climate change and the contribution of carbon store in the soils, the national estimates of soil carbon stocks should be determined. Estonian soils have been well studied and mapped at a scale 1:10,000. Previous studies have estimated SOC stocks based on combinations of large groups of Estonian soils and the mean values of the soil profile database, but were not embedded into the geo-referenced databases. These studies have estimated SOC stocks of Estonian arable soils 122.3 Tg. Despite of available soil maps and databases, this information is still very poorly used for spatial soil modelling. The aim of current study is to assess and model spatial pattern of SOC stocks of arable soils on a pilot area Tartu County (area 3089 sq km). Estonian digital soil map and soil monitoring databases are providing a good opportunity to assess SOC stocks at various scales. The qualitative nature of the initial data from a soil map prohibits any straightforward use in modelling. Thus we have used several databases to construct models and linkages between soil properties that can be integrated into soil map. First step was to reorganize the soil map database (44,046 mapping units) so it can be used as an input to modelling. Arable areas were distinguished by a field layer of Agricultural Registers and Information Board, which provides precise information of current land use as it is the basis of paying CAP subsidies. The estimates of SOC content were found by using the arable land evaluation database of Tartu from the Estonian Land Board (comprising 950 sq km and 31,226 fields), where each soil type was assessed separately and average SOC content grouped by texture was derived. SOC content of epipedon varies in

  3. Early Warning Signals of Ecological Transitions: Methods for Spatial Patterns

    Science.gov (United States)

    Brock, William A.; Carpenter, Stephen R.; Ellison, Aaron M.; Livina, Valerie N.; Seekell, David A.; Scheffer, Marten; van Nes, Egbert H.; Dakos, Vasilis

    2014-01-01

    A number of ecosystems can exhibit abrupt shifts between alternative stable states. Because of their important ecological and economic consequences, recent research has focused on devising early warning signals for anticipating such abrupt ecological transitions. In particular, theoretical studies show that changes in spatial characteristics of the system could provide early warnings of approaching transitions. However, the empirical validation of these indicators lag behind their theoretical developments. Here, we summarize a range of currently available spatial early warning signals, suggest potential null models to interpret their trends, and apply them to three simulated spatial data sets of systems undergoing an abrupt transition. In addition to providing a step-by-step methodology for applying these signals to spatial data sets, we propose a statistical toolbox that may be used to help detect approaching transitions in a wide range of spatial data. We hope that our methodology together with the computer codes will stimulate the application and testing of spatial early warning signals on real spatial data. PMID:24658137

  4. Patterns at Multi-Spatial Scales on Tropical Island Stream Insect Assemblages: Gorgona Island Natural National Park, Colombia, Tropical Eastern Pacific

    Directory of Open Access Journals (Sweden)

    Magnolia Longo

    2014-02-01

    Full Text Available Tropical Eastern Pacific island streams (TEPis differ from other neotropical streams in their rainy climate, mixed sedimentary-volcanic geology and faunal composition. Yet, their relationships between environmental characteristics and stream biota remain unexplored. We analyzed the environmental subject at three spatial scales using a fully nested sampling design (6 streams, 2 reaches within each stream, 2 habitats within each reach, and 4 replicates per habitat on Gorgona Island (Colombia. Sampling was carried out in two months with contrasting rainfall during early 2009. We studied the spatial variation of assemblage composition and density along with 27 independent variables within two contrasting rainfall conditions. Five stream-scale variables, two reach-scale variables, and five habitat-scale variables were selected using a Canonical Correspondence Analysis (CCA. A partial CCA showed that the total variance explained was 13.98%, while stream- and habitat-scale variables explained the highest proportion of the variance (5.74 and 5.01%, respectively. Dissolved oxygen (as affected by rainfall, high-density use zone (a management category, and sedimentary geology were the best descriptors of insect assemblages. The two latter descriptors affected fine-scale variables such as total benthic organic matter and gravel substratum, respectively. A Nested ANOVA showed significant differences in total density and richness among streams and habitats, and significant differences between the two sampling months regardless of the spatial scale. The evenness showed a significant stream- and habitat-dependent temporal variability. These results suggested that rainfall regime in Gorgona Island might be a driver of insect assemblage dynamics mediated by water chemistry and substratum properties. Spatial assemblage variability here is greater within habitats (among samples, and a minor fraction occurs at habitat- and stream-scales, while no longitudinal

  5. Reactive Transport of Marcellus Shale Waters in Natural Aquifers: the Role of Mineralogical Compositions and Spatial Distribution Patterns

    Science.gov (United States)

    Cai, Z.; Wen, H.; Li, L.

    2017-12-01

    Accidental release of Marcellus Shale waters (MSW) can release high concentrations of chemicals that can deteriorate groundwater quality. It is important to understand the reactive transport and fate of chemicals from MSW. Natural aquifers typically have complex mineralogical compositions and are heterogeneous with large spatial variation in terms of physical and geochemical properties. To investigate the effects of mineralogical compositions, flow-through experiments and reactive transport modeling were carried out using 3 large columns (5 cm×50 cm, Quartz, Calcite, and Vermiculite). Results indicate calcite immobilizes heavy metals by precipitation and solid solution partitioning (coprecipitation). Vermiculite retards heavy metals through ion exchange. The sorbed chemicals however slowly release back to the groundwater. Na and Ca transport similarly to Br in Qtz and Cal columns however become sorbed in Vrm column during release through ion exchange by 27.8% and 46.5%, respectively and later slowly release back to aqueous phase. To understand the role of mineral spatial patterns, three 2D flow-cell (40 cm×12 cm×1 cm) experiments were carried out. All flow cells have the same clay mass within quartz matrix but different spatial patterns characterized by the relative length of the clay zone ( 0, ¼, ½) of the domain length (L). Results show that in the uniform column, ion exchange dominates and most Ba sorbs to the solid phase, to an extent Ba cannot precipitate out with SO4 as barite. In 1/2-Zone, however, most Ba precipitates as barite. In 1/4-Zone, both ion exchange and mineral precipitation occur. In general, the 1/2-Zone has the smallest ion exchange capacity for other species including Na, Ca, Mg, K and heavy metals (Mn, Cu, Zn, Cd and Pb) as well. Our flow cell experiment emphasizes the importance of mineral spatial patterns in regulating not only reaction rates but also the type of reactions in controlling the reactive transport of MSW chemicals. The

  6. Climate and landscape influence on indicators of lake carbon cycling through spatial patterns in dissolved organic carbon.

    Science.gov (United States)

    Lapierre, Jean-Francois; Seekell, David A; Del Giorgio, Paul A

    2015-12-01

    Freshwater ecosystems are strongly influenced by both climate and the surrounding landscape, yet the specific pathways connecting climatic and landscape drivers to the functioning of lake ecosystems are poorly understood. Here, we hypothesize that the links that exist between spatial patterns in climate and landscape properties and the spatial variation in lake carbon (C) cycling at regional scales are at least partly mediated by the movement of terrestrial dissolved organic carbon (DOC) in the aquatic component of the landscape. We assembled a set of indicators of lake C cycling (bacterial respiration and production, chlorophyll a, production to respiration ratio, and partial pressure of CO2 ), DOC concentration and composition, and landscape and climate characteristics for 239 temperate and boreal lakes spanning large environmental and geographic gradients across seven regions. There were various degrees of spatial structure in climate and landscape features that were coherent with the regionally structured patterns observed in lake DOC and indicators of C cycling. These different regions aligned well, albeit nonlinearly along a mean annual temperature gradient; whereas there was a considerable statistical effect of climate and landscape properties on lake C cycling, the direct effect was small and the overall effect was almost entirely overlapping with that of DOC concentration and composition. Our results suggest that key climatic and landscape signals are conveyed to lakes in part via the movement of terrestrial DOC to lakes and that DOC acts both as a driver of lake C cycling and as a proxy for other external signals. © 2015 John Wiley & Sons Ltd.

  7. ‘Forced Car Ownership’ in the UK and Germany: Socio-Spatial Patterns and Potential Economic Stress Impacts

    Directory of Open Access Journals (Sweden)

    Giulio Mattioli

    2017-12-01

    Full Text Available The notion of ‘forced car ownership’ (FCO, born out of transport research on UK rural areas, is used to define households who own cars despite limited economic resources. FCO is thought to result in households cutting expenditure on other necessities and/or reducing travel activity to the bare minimum, both of which may result in social exclusion. Social exclusion research, on the other hand, has paid much attention to ‘material deprivation’, i.e., the economic strain and enforced lack of durable goods arising from low income. However, the FCO phenomenon suggests that, among households with limited resources, the enforced possession and use of a durable good can be the cause of material deprivation, economic stress and vulnerability to fuel price increases. In this study, we use 2012 EU ‘Income and Living Conditions’ data (EU-SILC to shed light on FCO in two European countries (UK and Germany. Through secondary data analysis we are able to show: the social and spatial patterns of FCO; key differences between FCO and ‘car deprived’ households; the intensity of social exclusion, material deprivation, and economic strain among FCO households; and overlaps between FCO and economic stress in other life domains (domestic fuel poverty, housing cost overburden. The results also show contrasting spatial patterns of FCO in Germany (higher incidence in rural areas and UK (similar incidence in urban and rural areas, which can be explained in light of the different socio-spatial configurations prevalent in the two countries. We conclude by discussing implications for future research and policy-making.

  8. Coi-wiz: An interactive computer wizard for analyzing cardiac optical signals.

    Science.gov (United States)

    Yuan, Xiaojing; Uyanik, Ilyas; Situ, Ning; Xi, Yutao; Cheng, Jie

    2009-01-01

    A number of revolutionary techniques have been developed for cardiac electrophysiology research to better study the various arrhythmia mechanisms that can enhance ablating strategies for cardiac arrhythmias. Once the three-dimensional high resolution cardiac optical imaging data is acquired, it is time consuming to manually go through them and try to identify the patterns associated with various arrhythmia symptoms. In this paper, we present an interactive computer wizard that helps cardiac electrophysiology researchers to visualize and analyze the high resolution cardiac optical imaging data. The wizard provides a file interface that accommodates different file formats. A series of analysis algorithms output waveforms, activation and action potential maps after spatial and temporal filtering, velocity field and heterogeneity measure. The interactive GUI allows the researcher to identify the region of interest in both the spatial and temporal domain, thus enabling them to study different heart chamber at their choice.

  9. The Association between Land-Use Distribution and Residential Patterns: the Case of Mixed Arab-Jewish Cities in Israel

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    Ran GOLDBLATT

    2014-06-01

    Full Text Available The emergence of GIS and the availability of high resolution geographic data have improved our ability to investigate the residential segregation in cities and to identify the temporal changes of the spatial phenomena. Using GIS, we have quantitatively and visually analyzed the correspondence between land-use distribution and Arab residential patterns and their changes in the period between 1983 and 2008 in five mixed Arab-Jewish Israeli cities. Results show a correspondence between the dynamics of Arab/Jewish residential patterns and the spatial distribution of various land-uses. Arab residential patterns diffused faster towards areas with relatively inferior land-uses than towards areas with more attractive land-uses, in which a gentrification process occurred. Moreover, large-scale non-residential land-uses act as spatial partitions that divide between Arab and Jewish residential areas. Understanding the association between the urban environment and residential patterns can help in formulating an appropriate social and spatial policy concerning planning of land-uses and design of the built environment in mixed cities.

  10. Ichthyoplankton spatial pattern in the inner shelf off Bahía Blanca Estuary, SW Atlantic Ocean

    Science.gov (United States)

    Hoffmeyer, Mónica Susana; Clara, Menéndez María; Florencia, Biancalana; Mabel, Nizovoy Alicia; Ramón, Torres Eduardo

    2009-09-01

    This study focuses on the composition, abundance and distribution of ichthyoplankton in the inner shelf area off Bahía Blanca Estuary on the SW Atlantic Ocean during late spring. Eggs and larvae of Brevoortia aurea, Engraulis anchoita, Parona signata, Sciaenidae spp. - such as Cynoscion guatucupa and Micropogonias furnieri -, and Odontesthes argentinensis were found. Species richness was low probably as a result of season and shallow depths. Ichthyoplankton abundance reached values close to 10 000 per 10 m -3 (eggs) and 4000 per 10 m -3 (larvae) and displayed a spatial distribution pattern with maximum abundance values restricted to a band parallel to the coast. Differences between egg and larval patterns, probably derived from a different displacement and hydrodynamic behavior, were observed. Egg and larvae distribution patterns were found related with spawning areas and to directly depend on salinity and mesozooplankton. The larvae distribution pattern, in particular, was found to inversely depend on particulate organic carbon. In addition, the geographic location of egg and larvae maxima strongly coincided with a saline front reported for this area in springtime, thus suggesting a direct relationship with it.

  11. Variability in modeled cloud feedback tied to differences in the climatological spatial pattern of clouds

    Science.gov (United States)

    Siler, Nicholas; Po-Chedley, Stephen; Bretherton, Christopher S.

    2018-02-01

    Despite the increasing sophistication of climate models, the amount of surface warming expected from a doubling of atmospheric CO_2 (equilibrium climate sensitivity) remains stubbornly uncertain, in part because of differences in how models simulate the change in global albedo due to clouds (the shortwave cloud feedback). Here, model differences in the shortwave cloud feedback are found to be closely related to the spatial pattern of the cloud contribution to albedo (α) in simulations of the current climate: high-feedback models exhibit lower (higher) α in regions of warm (cool) sea-surface temperatures, and therefore predict a larger reduction in global-mean α as temperatures rise and warm regions expand. The spatial pattern of α is found to be strongly predictive (r=0.84) of a model's global cloud feedback, with satellite observations indicating a most-likely value of 0.58± 0.31 Wm^{-2} K^{-1} (90% confidence). This estimate is higher than the model-average cloud feedback of 0.43 Wm^{-2} K^{-1}, with half the range of uncertainty. The observational constraint on climate sensitivity is weaker but still significant, suggesting a likely value of 3.68 ± 1.30 K (90% confidence), which also favors the upper range of model estimates. These results suggest that uncertainty in model estimates of the global cloud feedback may be substantially reduced by ensuring a realistic distribution of clouds between regions of warm and cool SSTs in simulations of the current climate.

  12. Quantifying spatial genetic structuring in mesophotic populations of the precious coral Corallium rubrum.

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    Federica Costantini

    Full Text Available While shallow water red coral populations have been overharvested in the past, nowadays, commercial harvesting shifted its pressure on mesophotic organisms. An understanding of red coral population structure, particularly larval dispersal patterns and connectivity among harvested populations is paramount to the viability of the species. In order to determine patterns of genetic spatial structuring of deep water Corallium rubrum populations, for the first time, colonies found between 58-118 m depth within the Tyrrhenian Sea were collected and analyzed. Ten microsatellite loci and two regions of mitochondrial DNA (mtMSH and mtC were used to quantify patterns of genetic diversity within populations and to define population structuring at spatial scales from tens of metres to hundreds of kilometres. Microsatellites showed heterozygote deficiencies in all populations. Significant levels of genetic differentiation were observed at all investigated spatial scales, suggesting that populations are likely to be isolated. This differentiation may by the results of biological interactions, occurring within a small spatial scale and/or abiotic factors acting at a larger scale. Mitochondrial markers revealed significant genetic structuring at spatial scales greater then 100 km showing the occurrence of a barrier to gene flow between northern and southern Tyrrhenian populations. These findings provide support for the establishment of marine protected areas in the deep sea and off-shore reefs, in order to effectively maintain genetic diversity of mesophotic red coral populations.

  13. Local behavioral rules sustain the cell allocation pattern in the combs of honey bee colonies (Apis mellifera).

    Science.gov (United States)

    Montovan, Kathryn J; Karst, Nathaniel; Jones, Laura E; Seeley, Thomas D

    2013-11-07

    In the beeswax combs of honey bees, the cells of brood, pollen, and honey have a consistent spatial pattern that is sustained throughout the life of a colony. This spatial pattern is believed to emerge from simple behavioral rules that specify how the queen moves, where foragers deposit honey/pollen and how honey/pollen is consumed from cells. Prior work has shown that a set of such rules can explain the formation of the allocation pattern starting from an empty comb. We show that these rules cannot maintain the pattern once the brood start to vacate their cells, and we propose new, biologically realistic rules that better sustain the observed allocation pattern. We analyze the three resulting models by performing hundreds of simulation runs over many gestational periods and a wide range of parameter values. We develop new metrics for pattern assessment and employ them in analyzing pattern retention over each simulation run. Applied to our simulation results, these metrics show alteration of an accepted model for honey/pollen consumption based on local information can stabilize the cell allocation pattern over time. We also show that adding global information, by biasing the queen's movements towards the center of the comb, expands the parameter regime over which pattern retention occurs. © 2013 Published by Elsevier Ltd. All rights reserved.

  14. Definition of spatial patterns of bark beetle Ips typographus (L.) outbreak spreading in Tatra Mountains (Central Europe), using GIS

    Science.gov (United States)

    Rastislav Jakus; Wojciech Grodzki; Marek Jezik; Marcin Jachym

    2003-01-01

    The spread of bark beetle outbreaks in the Tatra Mountains was explored by using both terrestrial and remote sensing techniques. Both approaches have proven to be useful for studying spatial patterns of bark beetle population dynamics. The terrestrial methods were applied on existing forestry databases. Vegetation change analysis (image differentiation), digital...

  15. Daily Access to Sucrose Impairs Aspects of Spatial Memory Tasks Reliant on Pattern Separation and Neural Proliferation in Rats

    Science.gov (United States)

    Reichelt, Amy C.; Morris, Margaret J.; Westbrook, Reginald Frederick

    2016-01-01

    High sugar diets reduce hippocampal neurogenesis, which is required for minimizing interference between memories, a process that involves "pattern separation." We provided rats with 2 h daily access to a sucrose solution for 28 d and assessed their performance on a spatial memory task. Sucrose consuming rats discriminated between objects…

  16. Spatio-temporal patterns of key exploited marine species in the Northwestern Mediterranean Sea.

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    Marie Morfin

    Full Text Available This study analyzes the temporal variability/stability of the spatial distributions of key exploited species in the Gulf of Lions (Northwestern Mediterranean Sea. To do so, we analyzed data from the MEDITS bottom-trawl scientific surveys from 1994 to 2010 at 66 fixed stations and selected 12 key exploited species. We proposed a geostatistical approach to handle zero-inflated and non-stationary distributions and to test for the temporal stability of the spatial structures. Empirical Orthogonal Functions and other descriptors were then applied to investigate the temporal persistence and the characteristics of the spatial patterns. The spatial structure of the distribution (i.e. the pattern of spatial autocorrelation of the 12 key species studied remained highly stable over the time period sampled. The spatial distributions of all species obtained through kriging also appeared to be stable over time, while each species displayed a specific spatial distribution. Furthermore, adults were generally more densely concentrated than juveniles and occupied areas included in the distribution of juveniles. Despite the strong persistence of spatial distributions, we also observed that the area occupied by each species was correlated to its abundance: the more abundant the species, the larger the occupation area. Such a result tends to support MacCall's basin theory, according to which density-dependence responses would drive the expansion of those 12 key species in the Gulf of Lions. Further analyses showed that these species never saturated their habitats, suggesting that they are below their carrying capacity; an assumption in agreement with the overexploitation of several of these species. Finally, the stability of their spatial distributions over time and their potential ability to diffuse outside their main habitats give support to Marine Protected Areas as a potential pertinent management tool.

  17. Disentangling endogenous versus exogenous pattern formation in spatial ecology: a case study of the ant Azteca sericeasur in southern Mexico.

    Science.gov (United States)

    Li, Kevin; Vandermeer, John H; Perfecto, Ivette

    2016-05-01

    Spatial patterns in ecology can be described as reflective of environmental heterogeneity (exogenous), or emergent from dynamic relationships between interacting species (endogenous), but few empirical studies focus on the combination. The spatial distribution of the nests of Azteca sericeasur, a keystone tropical arboreal ant, is thought to form endogenous spatial patterns among the shade trees of a coffee plantation through self-regulating interactions with controlling agents (i.e. natural enemies). Using inhomogeneous point process models, we found evidence for both types of processes in the spatial distribution of A. sericeasur. Each year's nest distribution was determined mainly by a density-dependent relationship with the previous year's lagged nest density; but using a novel application of a Thomas cluster process to account for the effects of nest clustering, we found that nest distribution also correlated significantly with tree density in the later years of the study. This coincided with the initiation of agricultural intensification and tree felling on the coffee farm. The emergence of this significant exogenous effect, along with the changing character of the density-dependent effect of lagged nest density, provides clues to the mechanism behind a unique phenomenon observed in the plot, that of an increase in nest population despite resource limitation in nest sites. Our results have implications in coffee agroecological management, as this system provides important biocontrol ecosystem services. Further research is needed, however, to understand the effective scales at which these relationships occur.

  18. Emergence of Distinct Spatial Patterns in Cellular Automata with Inertia: A Phase Transition-Like Behavior

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    Klaus Kramer

    2017-03-01

    Full Text Available We propose a Cellular Automata (CA model in which three ubiquitous and relevant processes in nature are present, namely, spatial competition, distinction between dynamically stronger and weaker agents and the existence of an inner resistance to changes in the actual state S n (=−1,0,+1 of each CA lattice cell n (which we call inertia. Considering ensembles of initial lattices, we study the average properties of the CA final stationary configuration structures resulting from the system time evolution. Assuming the inertia a (proper control parameter, we identify qualitative changes in the CA spatial patterns resembling usual phase transitions. Interestingly, some of the observed features may be associated with continuous transitions (critical phenomena. However, certain quantities seem to present jumps, typical of discontinuous transitions. We argue that these apparent contradictory findings can be attributed to the inertia parameter’s discrete character. Along the work, we also briefly discuss a few potential applications for the present CA formulation.

  19. Participatory Boat Tracking Reveals Spatial Fishing Patterns in an Indonesian Artisanal Fishery

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    Gabriela Navarrete Forero

    2017-12-01

    Full Text Available The Spermonde Archipelago holds one of the largest artisanal fisheries in Indonesia, providing livelihoods for local communities and many other people involved in international trade networks of seafood. High demand and a lack of enforcement of existing fisheries regulations turn into high pressure for the coral reef ecosystem, contributing to its overall degradation. Estimations on the ecological impacts of different levels of fishing pressure, as well as fisheries stock assessments and marine resource management require precise information of the spatial distribution of fishing effort, which involves great uncertainty when only anecdotal information is considered. We explored the feasibility of applying participatory boat tracking to complement fisheries data during the NW monsoon season 2014–2015. We conducted interviews, measured catch landings, and distributed GPS data loggers among hook and line fishermen to identify fishing grounds by gear-dependent patterns of boat movement. Most of the fishing activities involved two gears (octopus bait and trolling line for live groupers and three fishing grounds. The mass of catch landings was dominated by Octopoda (CPUE = 10.1 kg boatday−1 while the most diverse group was the fish family Serranidae, with Plectropomus leopardus being the main target species. In conclusion, boat tracking combined with interviews and catch surveys has proven a useful tool to reduce uncertainty in information on spatial resource use, while allowing a high level of participation by fishermen.

  20. Comparison of Modeling Grassland Degradation with and without Considering Localized Spatial Associations in Vegetation Changing Patterns

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    Yuwei Wang

    2018-01-01

    Full Text Available Grassland ecosystems worldwide are confronted with degradation. It is of great importance to understand long-term trajectory patterns of grassland vegetation by advanced analytical models. This study proposes a new approach called a binary logistic regression model with neighborhood interactions, or BLR-NIs, which is based on binary logistic regression (BLR, but fully considers the spatio-temporally localized spatial associations or characterization of neighborhood interactions (NIs in the patterns of grassland vegetation. The BLR-NIs model was applied to a modeled vegetation degradation of grasslands in the Xilin river basin, Inner Mongolia, China. Residual trend analysis on the normalized difference vegetation index (RESTREND-NDVI, which excluded the climatic impact on vegetation dynamics, was adopted as a preprocessing step to derive three human-induced trajectory patterns (vegetation degradation, vegetation recovery, and no significant change in vegetation during two consecutive periods, T1 (2000–2008 and T2 (2007–2015. Human activities, including livestock grazing intensity and transportation accessibility measured by road network density, were included as explanatory variables for vegetation degradation, which was defined for locations if vegetation recovery or no significant change in vegetation in T1 and vegetation degradation in T2 were observed. Our work compared the results of BLR-NIs and the traditional BLR model that did not consider NIs. The study showed that: (1 both grazing intensity and road density had a positive correlation to vegetation degradation based on the traditional BLR model; (2 only road density was found to positively correlate to vegetation degradation by the BLR-NIs model; NIs appeared to be critical factors to predict vegetation degradation; and (3 including NIs in the BLR model improved the model performance substantially. The study provided evidence for the importance of including localized spatial