WorldWideScience

Sample records for analyzing spatial patterns

  1. Semiparametric Multinomial Ordinal Model to Analyze Spatial Patterns of Child Birth Weight in Nigeria

    Directory of Open Access Journals (Sweden)

    Rasheed A. Adeyemi

    2016-11-01

    Full Text Available Background: Birth weight is an important health parameter for obstetricians and gynaecologists. It is a good health indicator of a child-bearing mother and a strong predictor of infant morbidity and mortality. Methods: This paper utilizes data on 28,647 children born between 2003–2008 obtained from the 2008 Nigeria Demographic and Health Survey (NDHS. For a simple epidemiological convenience, the occurrence of a newborn weight can intuitively be considered to be categorical in nature and the thresholds can be put on a continuous scale. In survey reporting, the mothers frequently estimate their infant’s birth weight and make a classification in ordinal category (low, normal, large instead of actual birth weight. The study fits a multinomial regression model to analyze the relationships between the polytomous response and different kind of covariates in a unified manner. We estimate the fixed effects of bio-social covariates parametrically and the non-linear effect modeled using P-spline. The spatial component was modeled using conditional autoregressive error. A penalized maximum likelihood estimation was performed to estimate the model parameters. Results: We found risk factors that are positively associated with low birth weight, which include multiple birth, short birth interval, death of sibling, childhood diarrhea, fever, mother’s smoking, firewood/dung cooking and poor household. Results further showed that iron syrup supplementation, antenatal attendance, mother literacy and household wealth had significant association with low probability of low birth weight. The finding also showed spatial patterns, which are not captured by the underlying determinants, and we produced probability predictive maps of the spatial residual effects. Conclusions: In addition to the statistical relevance of our method, the generated spatial maps identify highly endemic areas of low birth weight that can assist government agency to channel scarce health

  2. Analyzing spatial patterns linked to the ecology of herbivores and their natural enemies in the soil

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    Raquel eCampos-Herrera

    2013-09-01

    Full Text Available Modern agricultural systems can benefit from the application of concepts and models from applied ecology. When understood, multitrophic interactions among plants, pests, diseases and their natural enemies can be exploited to increase crop production and reduce undesirable environmental impacts. Although the understanding of subterranean ecology is rudimentary compared to the perspective aboveground, technologies today vastly reduce traditional obstacles to studying cryptic communities. Here we emphasize advantages to integrating as much as possible the use of these methods in order to leverage the information gained from studying communities of soil organisms. PCR–based approaches to identify and quantify species (real time qPCR and new generation sequencing greatly expand the ability to investigate food web interactions because there is less need for wide taxonomic expertise within research programs. Improved methods to capture and measure volatiles in the soil atmosphere in situ make it possible to detect and study chemical cues that are critical to communication across trophic levels. The application of SADIE to directly assess rather than infer spatial patterns in belowground agroecosystems has improved the ability to characterize relationships between organisms in space and time. We review selected methodology and use of these tools and describe some of the ways they were integrated to study soil food webs in Florida citrus orchards with the goal of developing new biocontrol approaches.

  3. Utilizing Geographic Information Systems and Spatial Video to Analyze Patterns of Secondhand Smoke Exposure on College Campuses.

    Science.gov (United States)

    Burke, Ryan C; Cinderich, Adam B; Prince, Lillian; Curtis, Andrew

    2015-01-01

    Innovatively apply geographic information system (GIS) software and spatial video cameras to examine hotspots of smoking and secondhand smoke (SHS) exposure on a college campus. Pedestrians on a large public university in the United States. Spatial video cameras mounted on bicycles and GIS software captured and analyzed smoking on campus. Data were collected during times of heavy pedestrian traffic. Hotspot locations with high concentrations of observed smoking were identified. Using this innovative methodology, several hotspots were identified on campus where SHS exposure occurs frequently. These hotspots were in areas of high pedestrian traffic, thus indicating a potential for SHS exposure to many students. This paper demonstrates an innovative application of GIS and spatial video technology to understand outdoor smoking patterns on campus. These techniques can aid in program planning, decision-making, policy development, and enforcement.

  4. Analyzing the causes and spatial pattern of the European 2003 carbon flux anomaly using seven models

    Directory of Open Access Journals (Sweden)

    M. Vetter

    2008-04-01

    Full Text Available Globally, the year 2003 is associated with one of the largest atmospheric CO2 rises on record. In the same year, Europe experienced an anomalously strong flux of CO2 from the land to the atmosphere associated with an exceptionally dry and hot summer in Western and Central Europe. In this study we analyze the magnitude of this carbon flux anomaly and key driving ecosystem processes using simulations of seven terrestrial ecosystem models of different complexity and types (process-oriented and diagnostic. We address the following questions: (1 how large were deviations in the net European carbon flux in 2003 relative to a short-term baseline (1998–2002 and to longer-term variations in annual fluxes (1980 to 2005, (2 which European regions exhibited the largest changes in carbon fluxes during the growing season 2003, and (3 which ecosystem processes controlled the carbon balance anomaly .

    In most models the prominence of 2003 anomaly in carbon fluxes declined with lengthening of the reference period from one year to 16 years. The 2003 anomaly for annual net carbon fluxes ranged between 0.35 and –0.63 Pg C for a reference period of one year and between 0.17 and –0.37 Pg C for a reference period of 16 years for the whole Europe.

    In Western and Central Europe, the anomaly in simulated net ecosystem productivity (NEP over the growing season in 2003 was outside the 1σ variance bound of the carbon flux anomalies for 1980–2005 in all models. The estimated anomaly in net carbon flux ranged between –42 and –158 Tg C for Western Europe and between 24 and –129 Tg C for Central Europe depending on the model used. All models responded to a dipole pattern of the climate anomaly in 2003. In Western and Central Europe NEP was reduced due to heat and drought. In contrast, lower than normal temperatures and higher air humidity decreased NEP over Northeastern Europe. While models agree on the sign of changes in

  5. Analyzing the spatial patterns and drivers of ecosystem services in rapidly urbanizing Taihu Lake Basin of China

    Science.gov (United States)

    Ai, Junyong; Sun, Xiang; Feng, Lan; Li, Yangfan; Zhu, Xiaodong

    2015-09-01

    Quantifying and mapping the distribution patterns of ecosystem services can help to ascertain which services should be protected and where investments should be directed to improve synergies and reduce tradeoffs. Moreover, the indicators of urbanization that affect the provision of ecosystem services must be identified to determine which approach to adopt in formulating policies related to these services. This paper presents a case study that maps the distribution of multiple ecosystem services and analyzes the ways in which they interact. The relationship between the supply of ecosystem services and the socio-economic development in the Taihu Lake Basin of eastern China is also revealed. Results show a significant negative relationship between crop production and tourism income ( pregulating services are also identified through a comparison of the ecosystem services in large and small cities. Regression analysis was used to compare and elucidate the relative significance of the selected urbanization factors to ecosystem services. The results indicate that urbanization level is the most substantial factor inversely correlated with crop production ( R 2 = 0.414) and nutrient retention services ( R 2 = 0.572). Population density is the most important factor that negatively affects carbon sequestration ( R 2 = 0.447). The findings of this study suggest the potential relevance of ecosystem service dynamics to urbanization management and decision making.

  6. Estimating Air Particulate Matter Using MODIS Data and Analyzing Its Spatial and Temporal Pattern over the Yangtze Delta Region

    Directory of Open Access Journals (Sweden)

    Jianhui Xu

    2016-09-01

    Full Text Available The deteriorating air quality in the Yangtze delta region is attracting growing public concern. In this paper, seasonal estimation models of the surface particulate matter (PM were established by using aerosol optical thickness (AOT retrievals from the moderate resolution imaging spectro-radiometer (MODIS on board NASA’s Terra satellite. The change of the regional distribution of the atmospheric mixed layer, relative humidity and meteorological elements have been taken into account in these models. We also used PM mass concentrations of ground measurements to evaluate the estimation accuracy of those models. The results show that model estimation of PM2.5 and PM10 mass concentrations were in good agreement with the ground-based observation of PM mass concentrations (p < 0.01, the R2 value of the PM2.5 concentrations experimental model for four seasons are 0.48, 0.62, 0.61 and 0.52 respectively. The R2 value of PM10 concentrations experimental model for four seasons are 0.57, 0.56, 0.64 and 0.68 respectively. At the same time, spatial and temporal variations of PM2.5 and PM10 mass concentrations were analysed over the Yangtze delta region from 2000 to 2013. The results show that PM2.5 and PM10 show a trend of increase in the Yangtze delta region from 2000 to 2013 and change periodically. The maximum mass concentration of PM2.5 and PM10 was in January–February, and the minimum was in July–August. The highest values of PM2.5 and PM10 mass concentration are in the region of urban agglomeration which is grouped to a delta-shaped region by Shanghai, Hangzhou and Nanjing, while the low values are in the forest far away from the city. PM mass concentration over main cities and rural areas increased gradually year by year, and were increasing more quickly in urban areas than in rural areas.

  7. A bio-inspired spatial patterning circuit.

    Science.gov (United States)

    Chen, Kai-Yuan; Joe, Danial J; Shealy, James B; Land, Bruce R; Shen, Xiling

    2014-01-01

    Lateral Inhibition (LI) is a widely conserved patterning mechanism in biological systems across species. Distinct from better-known Turing patterns, LI depend on cell-cell contact rather than diffusion. We built an in silico genetic circuit model to analyze the dynamic properties of LI. The model revealed that LI amplifies differences between neighboring cells to push them into opposite states, hence forming stable 2-D patterns. Inspired by this insight, we designed and implemented an electronic circuit that recapitulates LI patterning dynamics. This biomimetic system serve as a physical model to elucidate the design principle of generating robust patterning through spatial feedback, regardless of the underlying devices being biological or electrical.

  8. Analyzing block placement errors in SADP patterning

    Science.gov (United States)

    Kobayashi, Shinji; Okada, Soichiro; Shimura, Satoru; Nafus, Kathleen; Fonseca, Carlos; Demand, Marc; Biesemans, Serge; Versluijs, Janko; Ercken, Monique; Foubert, Philippe; Miyazaki, Shinobu

    2016-03-01

    We discuss edge placement errors (EPE) for multi-patterning of Mx critical layers using ArF lithography. Specific focus is placed on the block formation part of the process. While plenty of literature characterization data exist on spacer formation, only limited published data is available on block processes. We analyze the accuracy of placing blocks relative to narrow spacers. Many publications calculate EPE assuming Gaussian distributions for key process variations contributing to EPE. For practical reasons, each contributor is measured on dedicated test structures. In this work, we complement such analysis and directly measure the EPE in product. We perform high density sampling of blocks using CDSEM images and analyze all feature edges of interest. We find that block placement errors can be very different depending on their local design context. Specifically we report on 2 block populations (further called block A and B) which have a 4x different standard deviation. We attribute this to differences in local topography (spacer shape) and interaction with the plasma-etch process design. Block A (on top of the `core space' S1) has excellent EPE uniformity of ~1 nm while block B (on top of `gap space' S2) has degraded EPE control of ~4 nm. Finally, we suggest that the SOC etch process is at the origin on positioning blocks accurately on slim spacers, helping the manufacturability of spacer-based patterning techniques, and helping its extension toward the 5nm node.

  9. Analyzing animal movement patterns using potential functions

    Science.gov (United States)

    H. K. Preisler; A. A. Ager; M. J. Wisdom

    2013-01-01

    The advent of GPS technology has made it possible to study human-wildlife interactions on large landscapes and quantify behavioral responses to recreation and other anthropogenic disturbances at increasingly fine scales. Of particular interest are the potential impacts on habitat use patterns, energetics, and cascading impacts on fecundity and other life history traits...

  10. Analyzing and Predicting Micro-Location Patterns of Software Firms

    Directory of Open Access Journals (Sweden)

    Jan Kinne

    2017-12-01

    Full Text Available While the effects of non-geographic aggregation on statistical inference are well studied in economics, research on the effects of geographic aggregation on regression analysis is rather scarce. This knowledge gap, together with the use of aggregated spatial units in previous firm location studies, results in a lack of understanding of firm location determinants at the microgeographic level. Suitable data for microgeographic location analysis has become available only recently through the emergence of Volunteered Geographic Information (VGI, especially the OpenStreetMap (OSM project, and the increasing availability of official (open geodata. In this paper, we use a comprehensive dataset of three million street-level geocoded firm observations to explore the location pattern of software firms in an Exploratory Spatial Data Analysis (ESDA. Based on the ESDA results, we develop a software firm location prediction model using Poisson regression and OSM data. Our findings offer novel insights into the mode of operation of the Modifiable Areal Unit Problem (MAUP in the context of a microgeographic location analysis: We find that non-aggregated data can be used to detect information on location determinants, which are superimposed when aggregated spatial units are analyzed, and that some findings of previous firm location studies are not robust at the microgeographic level. However, we also conclude that the lack of high-resolution geodata on socio-economic population characteristics causes systematic prediction errors, especially in cities with diverse and segregated populations.

  11. Mapping spatial patterns with morphological image processing

    Science.gov (United States)

    Peter Vogt; Kurt H. Riitters; Christine Estreguil; Jacek Kozak; Timothy G. Wade; James D. Wickham

    2006-01-01

    We use morphological image processing for classifying spatial patterns at the pixel level on binary land-cover maps. Land-cover pattern is classified as 'perforated,' 'edge,' 'patch,' and 'core' with higher spatial precision and thematic accuracy compared to a previous approach based on image convolution, while retaining the...

  12. Spatial patterns of development drive water use

    Science.gov (United States)

    G. M. Sanchez; J. W. Smith; A. Terando; G. Sun; R. K. Meentemeyer

    2018-01-01

    Water availability is becoming more uncertain as human populations grow, cities expand into rural regions and the climate changes. In this study, we examine the functional relationship between water use and the spatial patterns of developed land across the rapidly growing region of the southeastern United States. We quantified the spatial pattern of developed land...

  13. Analysis of Spatial Voting Patterns: An Approach in Political Socialization

    Science.gov (United States)

    Klimasewski, Ted

    1973-01-01

    Passage of the 26th Amendment gave young adults the right to vote. This study attempts to further student understanding of the electoral process by presenting a method for analyzing spatial voting patterns. The spatial emphasis adds another dimension to the temporal and behavioral-structural approaches in studying the American electoral system.…

  14. Keys to analyzing the spatial categories in employment records studies

    Directory of Open Access Journals (Sweden)

    Eugenia Roberti

    2012-01-01

    Full Text Available The aim of this study is to carry out a bibliographical review of the ways in which spatial categories have been approached within poor people's employment record studies. The significance of this research lies on the fact that, even though the perspectives from which the concept of "record" emerges give precedence to the analysis of time and space dimensions, the latter has only been scarcely studied. Within such framework, our paper aims to analyze how the space variable is constructed in various empirical investigations and which contributions are made by the record perspective to space variable studies. To approach the issue, we will focus on those spatial categories of analysis which allow us to discern the new characteristics and consequences underlying the spatial segregation phenomenon. Special emphasis will be given to the neighborhood space

  15. Analyzing Spatial Factors in Crime-inducing Culture in Chaloos

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    Mohammad Hossein Omidi Noghlehbari

    2017-02-01

    Full Text Available Feelings of security in urban areas are one of the qualitative criteria of living space. With the rise in urbanization and increasing abnormal urban behavior, especially offenses, this issue has become of great importance. This study aims to identify and analyze the effects of spatial factors on crime-inducing culture in affluent and non-affluent neighborhoods of Chaloos. The method used in this study is analytical-descriptive and it is practical in terms of objective. In order to study and understand the status of physical-spatial structures of affluent and non-affluent neighborhoods in Chaloos, we used field study method. Data were collected through interview, notes taking and questionnaire. The results indicate that in affluent neighborhoods, all criteria components of spatial differences are above the mean (Mean=3, but in non-affluent neighborhoods, all components are lower than the mean. In addition, there is a significant relationship between criteria components of spatial differences and the formation of crime-inducing culture (except the diagnosis component in the affluent and non-affluent neighborhoods.

  16. Spatial capture-recapture: a promising method for analyzing data collected using artificial cover objects

    Science.gov (United States)

    Sutherland, Chris; Munoz, David; Miller, David A.W.; Grant, Evan H. Campbell

    2016-01-01

    Spatial capture–recapture (SCR) is a relatively recent development in ecological statistics that provides a spatial context for estimating abundance and space use patterns, and improves inference about absolute population density. SCR has been applied to individual encounter data collected noninvasively using methods such as camera traps, hair snares, and scat surveys. Despite the widespread use of capture-based surveys to monitor amphibians and reptiles, there are few applications of SCR in the herpetological literature. We demonstrate the utility of the application of SCR for studies of reptiles and amphibians by analyzing capture–recapture data from Red-Backed Salamanders, Plethodon cinereus, collected using artificial cover boards. Using SCR to analyze spatial encounter histories of marked individuals, we found evidence that density differed little among four sites within the same forest (on average, 1.59 salamanders/m2) and that salamander detection probability peaked in early October (Julian day 278) reflecting expected surface activity patterns of the species. The spatial scale of detectability, a measure of space use, indicates that the home range size for this population of Red-Backed Salamanders in autumn was 16.89 m2. Surveying reptiles and amphibians using artificial cover boards regularly generates spatial encounter history data of known individuals, which can readily be analyzed using SCR methods, providing estimates of absolute density and inference about the spatial scale of habitat use.

  17. West African spatial patterns of economic activities

    DEFF Research Database (Denmark)

    Walther, Olivier; Howard, Allen; Retaillé, Denis

    2015-01-01

    Over the last 30 years, two different bodies of literature developed by both US historians and francophone geographers have moved toward similar conclusions regarding West African economic spatial patterns. Despite their different backgrounds, both the ‘spatial factor’ approach promoted by histor......Over the last 30 years, two different bodies of literature developed by both US historians and francophone geographers have moved toward similar conclusions regarding West African economic spatial patterns. Despite their different backgrounds, both the ‘spatial factor’ approach promoted...... traders, and where their differences lie. Finally, we show how a combined approach can make a significant contribution to the scholarly study of space in West Africa. We argue that continuing dialogue among fields can contribute to a reassessment of development policies....

  18. Generalized pattern spectra sensitive to spatial information

    NARCIS (Netherlands)

    Wilkinson, MHF; Kasturi, R; Laurendeau, D; Suen, C

    2002-01-01

    Morphological pattern spectra computed from granulometrics are frequently used to classify the size classes of details in textures and images. An extension of this technique, which retains information on the spatial distribution of the details in each size class is developed. Algorithms for

  19. Reconstruction of paleoenvironments by analyzing spatial shell orientation

    Science.gov (United States)

    Lukeneder, Susanne; Lukeneder, Alexander; Weber, Gerhard W.; Exner, Ulrike

    2013-04-01

    one side of the shell (transverse axis) was measured (landmark s & c). Spatial orientation was characterized by dip and dip direction of the longitudinal axis, as well as by strike and azimuth of a plane defined by both axes. The exact spatial orientation data was determined for a sample of 699 ammonoids within the bed and statistically analyzed. The results provide a hint on the geodynamic processes (paleocurrents), depositional conditions (allochthonous or autochthonous) and other general information about the ancient environment. The method can be adapted for other mass-occurring fossils and thus represents a good template for studies of topographical paleoenvironmental factors. References: Flügel, E. 2004. Microfacies of carbonate rocks. Analysis, Interpretation and Application. Springer, Berlin Heidelberg New York, p.182. Lukeneder S., Lukeneder A., Harzhauser M., Islamoglu Y., Krystyn L., Lein R. 2012. A delayed carbonate factory breakdown during the Tethyan-wide Carnian Pluvial Episode along the Cimmerian terranes (Taurus, Turkey). Facies 58: 279-296.

  20. Triclustering Georeferenced Time Series for Analyzing Patterns of Intra-Annual Variability in Temperature

    NARCIS (Netherlands)

    Wu, Xiaojing; Zurita-Milla, R.; Izquierdo Verdiguier, E.; Kraak, M.J.

    Clustering is often used to explore patterns in georeferenced time series (GTS). Most clustering studies, however, only analyze GTS from one or two dimension(s) and are not capable of the simultaneous analysis of the data from three dimensions: spatial, temporal, and any third (e.g., attribute)

  1. The spatial patterns of directional phenotypic selection

    KAUST Repository

    Siepielski, Adam M.

    2013-09-12

    Local adaptation, adaptive population divergence and speciation are often expected to result from populations evolving in response to spatial variation in selection. Yet, we lack a comprehensive understanding of the major features that characterise the spatial patterns of selection, namely the extent of variation among populations in the strength and direction of selection. Here, we analyse a data set of spatially replicated studies of directional phenotypic selection from natural populations. The data set includes 60 studies, consisting of 3937 estimates of selection across an average of five populations. We performed meta-analyses to explore features characterising spatial variation in directional selection. We found that selection tends to vary mainly in strength and less in direction among populations. Although differences in the direction of selection occur among populations they do so where selection is often weakest, which may limit the potential for ongoing adaptive population divergence. Overall, we also found that spatial variation in selection appears comparable to temporal (annual) variation in selection within populations; however, several deficiencies in available data currently complicate this comparison. We discuss future research needs to further advance our understanding of spatial variation in selection. © 2013 John Wiley & Sons Ltd/CNRS.

  2. Rapid neurotransmitter uncaging in spatially defined patterns.

    Science.gov (United States)

    Shoham, Shy; O'Connor, Daniel H; Sarkisov, Dmitry V; Wang, Samuel S-H

    2005-11-01

    Light-sensitive 'caged' molecules provide a means of rapidly and noninvasively manipulating biochemical signals with submicron spatial resolution. Here we describe a new optical system for rapid uncaging in arbitrary patterns to emulate complex neural activity. This system uses TeO(2) acousto-optical deflectors to steer an ultraviolet beam rapidly and can uncage at over 20,000 locations per second. The uncaging beam is projected into the focal plane of a two-photon microscope, allowing us to combine patterned uncaging with imaging and electrophysiology. By photolyzing caged neurotransmitter in brain slices we can generate precise, complex activity patterns for dendritic integration. The method can also be used to activate many presynaptic neurons at once. Patterned uncaging opens new vistas in the study of signal integration and plasticity in neuronal circuits and other biological systems.

  3. Inputs and spatial distribution patterns of Cr in Jiaozhou Bay

    Science.gov (United States)

    Yang, Dongfang; Miao, Zhenqing; Huang, Xinmin; Wei, Linzhen; Feng, Ming

    2018-03-01

    Cr pollution in marine bays has been one of the critical environmental issues, and understanding the input and spatial distribution patterns is essential to pollution control. In according to the source strengths of the major pollution sources, the input patterns of pollutants to marine bay include slight, moderate and heavy, and the spatial distribution are corresponding to three block models respectively. This paper analyzed input patterns and distributions of Cr in Jiaozhou Bay, eastern China based on investigation on Cr in surface waters during 1979-1983. Results showed that the input strengths of Cr in Jiaozhou Bay could be classified as moderate input and slight input, and the input strengths were 32.32-112.30 μg L-1 and 4.17-19.76 μg L-1, respectively. The input patterns of Cr included two patterns of moderate input and slight input, and the horizontal distributions could be defined by means of Block Model 2 and Block Model 3, respectively. In case of moderate input pattern via overland runoff, Cr contents were decreasing from the estuaries to the bay mouth, and the distribution pattern was parallel. In case of moderate input pattern via marine current, Cr contents were decreasing from the bay mouth to the bay, and the distribution pattern was parallel to circular. The Block Models were able to reveal the transferring process of various pollutants, and were helpful to understand the distributions of pollutants in marine bay.

  4. Fractal approach in characterization of spatial pattern of soil properties

    Directory of Open Access Journals (Sweden)

    Boško Miloš

    2017-01-01

    Full Text Available The objective of the study was to characterize spatial pattern of soil properties (CaCO3, soil organic carbon, P2O5, K2O, and clay content using fractal concept. Total of 141 top-soil samples (0-30 cm were collected on 1850 ha in karst polje (Petrovo polje, Croatia and analyzed for listed soil properties. The semi-variogram method was used to estimate fractal dimension (D value which was performed from both of isotropic and anisotropic perspective. The D value of soil properties ranged between 1.76 to 1.97, showing a domination of the short-range variations. The SOC and K2O fractal D values 1.79 and 1.76 respectively, exhibited a spatial continuity at the entire analysed range of the scale. The D value for P2O5 (1.97 showed a nearly total absence of the spatial structure at all scales. The CaCO3 and clay content indicated a multifractal behavior mainly attributed to effects of alluviation, differences in geology and its spatial changes and transitions. The results of anisotropic analysis of soil properties pattern have showed strong relations with directions and partial self-similarity over limited ranges of scales defined by scale-break. Finally, our results showed that fractal analysis can be used as a appropriate tool for the characterization of spatial pattern irregularities of soil properties and detection of soil forming factors that cause it.

  5. Spatial pattern of ASG-EUPOS sites

    Science.gov (United States)

    Calka, Beata; Bielecka, Elzbieta; Figurski, Mariusz

    2017-12-01

    The article presents the spatial pattern analysis of the ASG-EUPOS permanent GNSS stations in Poland. Using different methods and tools (nearest neighbour, Riplay's K-function, morphology of Thiessen polygons) we proved that the station distribution model changes within scales. At short distances up to 65 km, which are typical lengths in the network, stations are irregularly dispersed. Increasing this distance to 130 km and over could result in a clustered pattern. The Thiessen polygon area in 72% depends on the level of urbanization, especially coverage of forested and built-up areas as well as the density of the transportation network. The smallest density of the ASG-EUPOS sites is one station over 10,000 sq. km, which is two times more than is stated in the national regulations. The mean distance from ASG-EUPOS location to the nearest station is about 41.5 km.

  6. Emerging spatial patterns in Antarctic prokaryotes.

    Science.gov (United States)

    Chong, Chun-Wie; Pearce, David A; Convey, Peter

    2015-01-01

    . Based on our synthesis, it is clear that spatial patterns of Antarctic prokaryotes can be unique at local scales, while the limited evidence available to date supports the group exhibiting overall regional biogeographical patterns similar to the eukaryotes. We further consider the applicability of the concept of "functional redundancy" for the Antarctic microbial community and highlight the requirements for proper consideration of their important and distinctive roles in Antarctic terrestrial ecosystems.

  7. Spectral feature classification and spatial pattern recognition

    Science.gov (United States)

    Sivertson, W. E., Jr.; Wilson, R. G.

    1979-01-01

    This paper introduces a spatial pattern recognition processing concept involving the use of spectral feature classification technology and coherent optical correlation. The concept defines a hybrid image processing system incorporating both digital and optical technology. The hybrid instrument provides simplified pseudopattern images as functions of pixel classification from information embedded within a real-scene image. These pseudoimages become simplified inputs to an optical correlator for use in a subsequent pattern identification decision useful in executing landmark pointing, tracking, or navigating functions. Real-time classification is proposed as a research tool for exploring ways to enhance input signal-to-noise ratio as an aid in improving optical correlation. The approach can be explored with developing technology, including a current NASA Langley Research Center technology plan that involves a series of related Shuttle-borne experiments. A first-planned experiment, Feature Identification and Location Experiment (FILE), is undergoing final ground testing, and is scheduled for flight on the NASA Shuttle (STS2/flight OSTA-1) in 1980. FILE will evaluate a technique for autonomously classifying earth features into the four categories: bare land; water; vegetation; and clouds, snow, or ice.

  8. Spatial patterns in accretion on barrier-island salt marshes

    NARCIS (Netherlands)

    Groot, de A.V.; Veeneklaas, R.M.; Kuijper, D.P.J.; Bakker, J.P.

    2011-01-01

    On minerogenic barrier-island salt marshes, sedimentation is spatially heterogeneous. Although the main forcing factors for sedimentation are known, much less is known about the characteristic sizes of this spatial patterning. Such patterning gives information on the spatial component of salt-marsh

  9. Spatial patterns of recreational impact on experimental campsites

    Science.gov (United States)

    David N. Cole; Christopher A. Monz

    2004-01-01

    Management of camping impacts in protected areas worldwide is limited by inadequate understanding of spatial patterns of impact and attention to spatial management strategies. Spatial patterns of campsite impact were studied in two subalpine plant communities in the Wind River Mountains, Wyoming, USA (a forest and a meadow). Response to chronic disturbance and recovery...

  10. Capturing and analyzing wheelchair maneuvering patterns with mobile cloud computing.

    Science.gov (United States)

    Fu, Jicheng; Hao, Wei; White, Travis; Yan, Yuqing; Jones, Maria; Jan, Yih-Kuen

    2013-01-01

    Power wheelchairs have been widely used to provide independent mobility to people with disabilities. Despite great advancements in power wheelchair technology, research shows that wheelchair related accidents occur frequently. To ensure safe maneuverability, capturing wheelchair maneuvering patterns is fundamental to enable other research, such as safe robotic assistance for wheelchair users. In this study, we propose to record, store, and analyze wheelchair maneuvering data by means of mobile cloud computing. Specifically, the accelerometer and gyroscope sensors in smart phones are used to record wheelchair maneuvering data in real-time. Then, the recorded data are periodically transmitted to the cloud for storage and analysis. The analyzed results are then made available to various types of users, such as mobile phone users, traditional desktop users, etc. The combination of mobile computing and cloud computing leverages the advantages of both techniques and extends the smart phone's capabilities of computing and data storage via the Internet. We performed a case study to implement the mobile cloud computing framework using Android smart phones and Google App Engine, a popular cloud computing platform. Experimental results demonstrated the feasibility of the proposed mobile cloud computing framework.

  11. Spatial patterns of seaweed distribution in Malaysia using GIS

    Science.gov (United States)

    Lian, Du Hai; Sim, Jillian Ooi Lean; Fauzi, Rosmadi; Moi, Phang Siew

    2008-10-01

    The objective of this article is to represent spatial patterns of seaweed distribution in Malaysia. Seaweeds have been collected since 1984 along coastlines of 4675 km of peninsular Malaysia, Sabah, and Sarawak. However, there is no seaweed database and they cannot be displayed in a geographic view. Therefore, a database with 805 georeferenced observations was setup and GIS is used to analyze seaweed diversity based on this database. The highest number of observations is 94 which occur along east coastline of peninsular Malaysia. The highest number of species richness is 82 which are also along east coastline of peninsular Malaysia. Rhodophyta has the highest species richness while Chlorophyta has the least species richness.

  12. Fractal approach in characterization of spatial pattern of soil properties

    OpenAIRE

    Boško Miloš; Aleksandra Bensa

    2017-01-01

    The objective of the study was to characterize spatial pattern of soil properties (CaCO3, soil organic carbon, P2O5, K2O, and clay content) using fractal concept. Total of 141 top-soil samples (0-30 cm) were collected on 1850 ha in karst polje (Petrovo polje, Croatia) and analyzed for listed soil properties. The semi-variogram method was used to estimate fractal dimension (D) value which was performed from both of isotropic and anisotropic perspective. The D value of soil properties ranged be...

  13. Understanding Spatiotemporal Patterns of Biking Behavior by Analyzing Massive Bike Sharing Data in Chicago.

    Science.gov (United States)

    Zhou, Xiaolu

    2015-01-01

    The growing number of bike sharing systems (BSS) in many cities largely facilitates biking for transportation and recreation. Most recent bike sharing systems produce time and location specific data, which enables the study of travel behavior and mobility of each individual. However, despite a rapid growth of interest, studies on massive bike sharing data and the underneath travel pattern are still limited. Few studies have explored and visualized spatiotemporal patterns of bike sharing behavior using flow clustering, nor examined the station functional profiles based on over-demand patterns. This study investigated the spatiotemporal biking pattern in Chicago by analyzing massive BSS data from July to December in 2013 and 2014. The BSS in Chicago gained more popularity. About 15.9% more people subscribed to this service. Specifically, we constructed bike flow similarity graph and used fastgreedy algorithm to detect spatial communities of biking flows. By using the proposed methods, we discovered unique travel patterns on weekdays and weekends as well as different travel trends for customers and subscribers from the noisy massive amount data. In addition, we also examined the temporal demands for bikes and docks using hierarchical clustering method. Results demonstrated the modeled over-demand patterns in Chicago. This study contributes to offer better knowledge of biking flow patterns, which was difficult to obtain using traditional methods. Given the trend of increasing popularity of the BSS and data openness in different cities, methods used in this study can extend to examine the biking patterns and BSS functionality in different cities.

  14. Spatial and temporal emergence pattern of Lyme disease in Virginia.

    Science.gov (United States)

    Li, Jie; Kolivras, Korine N; Hong, Yili; Duan, Yuanyuan; Seukep, Sara E; Prisley, Stephen P; Campbell, James B; Gaines, David N

    2014-12-01

    The emergence of infectious diseases over the past several decades has highlighted the need to better understand epidemics and prepare for the spread of diseases into new areas. As these diseases expand their geographic range, cases are recorded at different geographic locations over time, making the analysis and prediction of this expansion complicated. In this study, we analyze spatial patterns of the disease using a statistical smoothing analysis based on areal (census tract level) count data of Lyme disease cases in Virginia from 1998 to 2011. We also use space and space-time scan statistics to reveal the presence of clusters in the spatial and spatiotemporal distribution of Lyme disease. Our results confirm and quantify the continued emergence of Lyme disease to the south and west in states along the eastern coast of the United States. The results also highlight areas where education and surveillance needs are highest. © The American Society of Tropical Medicine and Hygiene.

  15. Spatial patterns of zooplankton distribution and abundance in ...

    African Journals Online (AJOL)

    Spatial patterns and abundance of zooplankton in aquatic habitats are important determinants for production of fish species, invertebrates and availability of phytoplankton. Weekly monitoring for zooplankton abundance was conducted in Shirati Bay, Lake Victoria, to explore their spatial patterns in relation to phytoplankton, ...

  16. Integrating spatial and numerical structure in mathematical patterning

    Science.gov (United States)

    Ni’mah, K.; Purwanto; Irawan, E. B.; Hidayanto, E.

    2018-03-01

    This paper reports a study monitoring the integrating spatial and numerical structure in mathematical patterning skills of 30 students grade 7th of junior high school. The purpose of this research is to clarify the processes by which learners construct new knowledge in mathematical patterning. Findings indicate that: (1) students are unable to organize the structure of spatial and numerical, (2) students were only able to organize the spatial structure, but the numerical structure is still incorrect, (3) students were only able to organize numerical structure, but its spatial structure is still incorrect, (4) students were able to organize both of the spatial and numerical structure.

  17. Competitive STDP Learning of Overlapping Spatial Patterns.

    Science.gov (United States)

    Krunglevicius, Dalius

    2015-08-01

    Spike-timing-dependent plasticity (STDP) is a set of Hebbian learning rules firmly based on biological evidence. It has been demonstrated that one of the STDP learning rules is suited for learning spatiotemporal patterns. When multiple neurons are organized in a simple competitive spiking neural network, this network is capable of learning multiple distinct patterns. If patterns overlap significantly (i.e., patterns are mutually inclusive), however, competition would not preclude trained neuron's responding to a new pattern and adjusting synaptic weights accordingly. This letter presents a simple neural network that combines vertical inhibition and Euclidean distance-dependent synaptic strength factor. This approach helps to solve the problem of pattern size-dependent parameter optimality and significantly reduces the probability of a neuron's forgetting an already learned pattern. For demonstration purposes, the network was trained for the first ten letters of the Braille alphabet.

  18. Evaluating spatial patterns in hydrological modelling

    DEFF Research Database (Denmark)

    Koch, Julian

    is not fully exploited by current modelling frameworks due to the lack of suitable spatial performance metrics. Furthermore, the traditional model evaluation using discharge is found unsuitable to lay confidence on the predicted catchment inherent spatial variability of hydrological processes in a fully...... the contiguous United Sates (10^6 km2). To this end, the thesis at hand applies a set of spatial performance metrics on various hydrological variables, namely land-surface-temperature (LST), evapotranspiration (ET) and soil moisture. The inspiration for the applied metrics is found in related fields...

  19. Spatial Pattern of Standing Timber Value across the Brazilian Amazon

    OpenAIRE

    Ahmed, Sadia E.; Ewers, Robert M.

    2012-01-01

    The Amazon is a globally important system, providing a host of ecosystem services from climate regulation to food sources. It is also home to a quarter of all global diversity. Large swathes of forest are removed each year, and many models have attempted to predict the spatial patterns of this forest loss. The spatial patterns of deforestation are determined largely by the patterns of roads that open access to frontier areas and expansion of the road network in the Amazon is largely determine...

  20. Optical pattern recognition via adaptive spatial homodyne detection.

    Science.gov (United States)

    Hsu, Magnus T L; Knittel, Joachim; Morizur, Jean-Francois; Bachor, Hans-A; Bowen, Warwick P

    2010-12-01

    We present an experimental demonstration of an optical pattern recognition scheme based on spatial homodyne detection. Our scheme is adaptive, all-optical, utilizes a single-element photo-detector, and provides a single parameter readout to quantify the efficacy of pattern recognition, thereby allowing very fast pattern recognition speeds. The spatial homodyne detector was applied to the identification of one- and two-dimensional phase profiles.

  1. Application of a clustering-remote sensing method in analyzing security patterns

    Science.gov (United States)

    López-Caloca, Alejandra; Martínez-Viveros, Elvia; Chapela-Castañares, José Ignacio

    2009-04-01

    In Mexican academic and government circles, research on criminal spatial behavior has been neglected. Only recently has there been an interest in criminal data geo-reference. However, more sophisticated spatial analyses models are needed to disclose spatial patterns of crime and pinpoint their changes overtime. The main use of these models lies in supporting policy making and strategic intelligence. In this paper we present a model for finding patterns associated with crime. It is based on a fuzzy logic algorithm which finds the best fit within cluster numbers and shapes of groupings. We describe the methodology for building the model and its validation. The model was applied to annual data for types of felonies from 2005 to 2006 in the Mexican city of Hermosillo. The results are visualized as a standard deviational ellipse computed for the points identified to be a "cluster". These areas indicate a high to low demand for public security, and they were cross-related to urban structure analyzed by SPOT images and statistical data such as population, poverty levels, urbanization, and available services. The fusion of the model results with other geospatial data allows detecting obstacles and opportunities for crime commission in specific high risk zones and guide police activities and criminal investigations.

  2. A sequential point process model and Bayesian inference for spatial point patterns with linear structures

    DEFF Research Database (Denmark)

    Møller, Jesper; Rasmussen, Jakob Gulddahl

    We introduce a flexible spatial point process model for spatial point patterns exhibiting linear structures, without incorporating a latent line process. The model is given by an underlying sequential point process model, i.e. each new point is generated given the previous points. Under this model...... points is such that the dependent cluster point is likely to occur closely to a previous cluster point. We demonstrate the flexibility of the model for producing point patterns with linear structures, and propose to use the model as the likelihood in a Bayesian setting when analyzing a spatial point...... pattern exhibiting linear structures but where the exact mechanism responsible for the formations of lines is unknown. We illustrate this methodology by analyzing two spatial point pattern data sets (locations of bronze age graves in Denmark and locations of mountain tops in Spain) without knowing which...

  3. Analyzing seasonal patterns of wildfire exposure factors in Sardinia, Italy

    Science.gov (United States)

    Michele Salis; Alan A. Ager; Fermin J. Alcasena; Bachisio Arca; Mark A. Finney; Grazia Pellizzaro; Donatella Spano

    2015-01-01

    In this paper, we applied landscape scale wildfire simulation modeling to explore the spatiotemporal patterns of wildfire likelihood and intensity in the island of Sardinia (Italy). We also performed wildfire exposure analysis for selected highly valued resources on the island to identify areas characterized by high risk. We observed substantial variation in burn...

  4. [Spatial patterns in communities of aquatic macroinvertebrates of Argentinean Puna].

    Science.gov (United States)

    Nieto, Carolina; Malizia, Agustina; Carilla, Julieta; Izquierdo, Andrea; Rodríguez, José; Cuello, Soledad; Zannier, Martín; Grau, H Ricardo

    2016-06-01

    Spatial patterns in communities of aquatic macroinvertebrates of Argentinean Puna. The macroinvertebrates are a vital component of freshwater ecosystems as they contribute to the process of organic matter while serving as food for other organisms such as fish and amphibians. Unfortunately, the knowledge of the aquatic diversity is poor in the high Andean systems (between 3 200 and 5 200 m.a.s.l. and rainfall below 300 mm per year), especially in the Argentinean peatbogs, a fact which has made difficult the interpretation of spatial patterns on a regional scale. The present study aimed to describe the composition of aquatic macroinvertebrates in seven peatbogs in the Argentinean Puna, and to analyze for the first time their spatial patterns. For this, we studied the relationship of these organisms with the environment, and obtained information about the surrounding vegetation and water physico-chemical characteristics. A total of 3 131 specimens of aquatic macroinvertebrates were collected, representing 25 taxa belonging to 22 families and 24 genera. In addition, 62 species of vascular plants were recorded, belonging to 20 families. The most abundant life form were the tufted grasses, followed by cushions. By using an NMDS (Non-Metrical Multidimensional Scaling) statistical analysis, the sampling sites were ordered in each peatbog as follows. The peatbogs located furthest West and South with higher water temperature were grouped on axis 1, whereas those with higher conductivity, whole water dissolved solids and salt concentration were grouped on axis 2. The water temperature was higher than air temperature at all times, and we found no association between temperature and altitude. The altitude had no correlation with the abundance of macroinvertebrates or with plant richness. Life forms such as scattered graminoids, trailing and prostrate herbs (in many cases they get into the channel) and aquatic plants were more abundant in peatbogs 4, 5 and 7 and they had a

  5. Understanding Spatiotemporal Patterns of Biking Behavior by Analyzing Massive Bike Sharing Data in Chicago.

    Directory of Open Access Journals (Sweden)

    Xiaolu Zhou

    Full Text Available The growing number of bike sharing systems (BSS in many cities largely facilitates biking for transportation and recreation. Most recent bike sharing systems produce time and location specific data, which enables the study of travel behavior and mobility of each individual. However, despite a rapid growth of interest, studies on massive bike sharing data and the underneath travel pattern are still limited. Few studies have explored and visualized spatiotemporal patterns of bike sharing behavior using flow clustering, nor examined the station functional profiles based on over-demand patterns. This study investigated the spatiotemporal biking pattern in Chicago by analyzing massive BSS data from July to December in 2013 and 2014. The BSS in Chicago gained more popularity. About 15.9% more people subscribed to this service. Specifically, we constructed bike flow similarity graph and used fastgreedy algorithm to detect spatial communities of biking flows. By using the proposed methods, we discovered unique travel patterns on weekdays and weekends as well as different travel trends for customers and subscribers from the noisy massive amount data. In addition, we also examined the temporal demands for bikes and docks using hierarchical clustering method. Results demonstrated the modeled over-demand patterns in Chicago. This study contributes to offer better knowledge of biking flow patterns, which was difficult to obtain using traditional methods. Given the trend of increasing popularity of the BSS and data openness in different cities, methods used in this study can extend to examine the biking patterns and BSS functionality in different cities.

  6. A geostatistical approach for describing spatial pattern in stream networks

    Science.gov (United States)

    Ganio, L.M.; Torgersen, C.E.; Gresswell, R.E.

    2005-01-01

    The shape and configuration of branched networks influence ecological patterns and processes. Recent investigations of network influences in riverine ecology stress the need to quantify spatial structure not only in a two-dimensional plane, but also in networks. An initial step in understanding data from stream networks is discerning non-random patterns along the network. On the other hand, data collected in the network may be spatially autocorrelated and thus not suitable for traditional statistical analyses. Here we provide a method that uses commercially available software to construct an empirical variogram to describe spatial pattern in the relative abundance of coastal cutthroat trout in headwater stream networks. We describe the mathematical and practical considerations involved in calculating a variogram using a non-Euclidean distance metric to incorporate the network pathway structure in the analysis of spatial variability, and use a non-parametric technique to ascertain if the pattern in the empirical variogram is non-random.

  7. Describing spatial pattern in stream networks: A practical approach

    Science.gov (United States)

    Ganio, L.M.; Torgersen, C.E.; Gresswell, R.E.

    2005-01-01

    The shape and configuration of branched networks influence ecological patterns and processes. Recent investigations of network influences in riverine ecology stress the need to quantify spatial structure not only in a two-dimensional plane, but also in networks. An initial step in understanding data from stream networks is discerning non-random patterns along the network. On the other hand, data collected in the network may be spatially autocorrelated and thus not suitable for traditional statistical analyses. Here we provide a method that uses commercially available software to construct an empirical variogram to describe spatial pattern in the relative abundance of coastal cutthroat trout in headwater stream networks. We describe the mathematical and practical considerations involved in calculating a variogram using a non-Euclidean distance metric to incorporate the network pathway structure in the analysis of spatial variability, and use a non-parametric technique to ascertain if the pattern in the empirical variogram is non-random.

  8. Analyzing the Influence of Neighborhood Development Pattern on Modal Choice

    Directory of Open Access Journals (Sweden)

    Ali Soltani

    2017-01-01

    Full Text Available Although several studies have been undertaken on the association between built environmental characteristics and travel patterns in western societies, the impacts of the local built environment on individuals’ travel behavior considering the specific conditions of developing nations have remained largely unknown. Thus, this paper investigates the travel behavior effects of local planning and design in three residential neighborhoods of Shiraz, a city in the southwest of Iran. The data on land use and built environment characteristics were extracted primarily from an existing digital map and GIS, whereas the data on individuals’ socioeconomics and their daily travel behavior were purposefully collected using a field questionnaire survey (n=393. A nested logit model (NLM based on the microeconomic utility concept was then applied to discover the impacts of personal characteristics and built environment factors on the choice mode of the individuals. The results and the associated policy implications can be helpful in defining a strategic agenda for neighborhood design and planning.

  9. Spatial patterns of an endemic Mediterranean palm recolonizing old fields

    OpenAIRE

    J?come?Flores, Miguel E.; Delibes, Miguel; Wiegand, Thorsten; Fedriani, Jos? M.

    2016-01-01

    Abstract Throughout Europe, increased levels of land abandonment lead to (re)colonization of old lands by forests and shrublands. Very little is known about the spatial pattern of plants recolonizing such old fields. We mapped in two 21?22?ha plots, located in the Do?ana National Park (Spain), all adult individuals of the endozoochorous dwarf palm Chamaerops humilis L. and determined their sex and sizes. We used techniques of spatial point pattern analysis (SPPA) to precisely quantify the spa...

  10. Spatial pattern of standing timber value across the Brazilian Amazon.

    Directory of Open Access Journals (Sweden)

    Sadia E Ahmed

    Full Text Available The Amazon is a globally important system, providing a host of ecosystem services from climate regulation to food sources. It is also home to a quarter of all global diversity. Large swathes of forest are removed each year, and many models have attempted to predict the spatial patterns of this forest loss. The spatial patterns of deforestation are determined largely by the patterns of roads that open access to frontier areas and expansion of the road network in the Amazon is largely determined by profit seeking logging activities. Here we present predictions for the spatial distribution of standing value of timber across the Amazon. We show that the patterns of timber value reflect large-scale ecological gradients, determining the spatial distribution of functional traits of trees which are, in turn, correlated with timber values. We expect that understanding the spatial patterns of timber value across the Amazon will aid predictions of logging movements and thus predictions of potential future road developments. These predictions in turn will be of great use in estimating the spatial patterns of deforestation in this globally important biome.

  11. Spatial pattern of standing timber value across the Brazilian Amazon.

    Science.gov (United States)

    Ahmed, Sadia E; Ewers, Robert M

    2012-01-01

    The Amazon is a globally important system, providing a host of ecosystem services from climate regulation to food sources. It is also home to a quarter of all global diversity. Large swathes of forest are removed each year, and many models have attempted to predict the spatial patterns of this forest loss. The spatial patterns of deforestation are determined largely by the patterns of roads that open access to frontier areas and expansion of the road network in the Amazon is largely determined by profit seeking logging activities. Here we present predictions for the spatial distribution of standing value of timber across the Amazon. We show that the patterns of timber value reflect large-scale ecological gradients, determining the spatial distribution of functional traits of trees which are, in turn, correlated with timber values. We expect that understanding the spatial patterns of timber value across the Amazon will aid predictions of logging movements and thus predictions of potential future road developments. These predictions in turn will be of great use in estimating the spatial patterns of deforestation in this globally important biome.

  12. Spatial patterns of species diversity in Kenya

    NARCIS (Netherlands)

    Oindo, B.O.

    2001-01-01

    The most striking feature of Earth is the existence of life and the most striking feature of life is its diversity. Explaining patterns of species diversity is one of the most complex problems in ecology. This is because diversity is usually the outcome of many contributing factors whose relative

  13. Multi-spatial analysis of aeolian dune-field patterns

    Science.gov (United States)

    Ewing, Ryan C.; McDonald, George D.; Hayes, Alex G.

    2015-07-01

    Aeolian dune-fields are composed of different spatial scales of bedform patterns that respond to changes in environmental boundary conditions over a wide range of time scales. This study examines how variations in spatial scales of dune and ripple patterns found within dune fields are used in environmental reconstructions on Earth, Mars and Titan. Within a single bedform type, different spatial scales of bedforms emerge as a pattern evolves from an initial state into a well-organized pattern, such as with the transition from protodunes to dunes. Additionally, different types of bedforms, such as ripples, coarse-grained ripples and dunes, coexist at different spatial scales within a dune-field. Analysis of dune-field patterns at the intersection of different scales and types of bedforms at different stages of development provides a more comprehensive record of sediment supply and wind regime than analysis of a single scale and type of bedform. Interpretations of environmental conditions from any scale of bedform, however, are limited to environmental signals associated with the response time of that bedform. Large-scale dune-field patterns integrate signals over long-term climate cycles and reveal little about short-term variations in wind or sediment supply. Wind ripples respond instantly to changing conditions, but reveal little about longer-term variations in wind or sediment supply. Recognizing the response time scales across different spatial scales of bedforms maximizes environmental interpretations from dune-field patterns.

  14. Emerging spatial patterns in Antarctic prokaryotes

    OpenAIRE

    Chong, Chun-Wie; Pearce, David A.; Convey, Peter

    2015-01-01

    Recent advances in knowledge of patterns of biogeography in terrestrial eukaryotic organisms have led to a fundamental paradigm shift in understanding of the controls and history of life on land in Antarctica, and its interactions over the long term with the glaciological and geological processes that have shaped the continent. However, while it has long been recognized that the terrestrial ecosystems of Antarctica are dominated by microbes and their processes, knowledge of microbial diversit...

  15. Emerging spatial patterns in Antarctic prokaryotes

    Directory of Open Access Journals (Sweden)

    Chun Wie eChong

    2015-09-01

    Full Text Available Recent advances in knowledge of patterns of biogeography in terrestrial eukaryotic organisms have led to a fundamental paradigm shift in understanding of the controls and history of life on land in Antarctica, and its interactions over the long term with the glaciological and geological processes that have shaped the continent. However, while it has long been recognized that the terrestrial ecosystems of Antarctica are dominated by microbes and their processes, knowledge of microbial diversity and distributions has lagged far behind that of the macroscopic eukaryote organisms. Increasing human contact with and activity in the continent is leading to risks of biological contamination and change in a region whose isolation has protected it for millions of years at least; these risks may be particularly acute for microbial communities which have, as yet, received scant recognition and attention. Even a matter apparently as straightforward as Protected Area designation in Antarctica requires robust biodiversity data which, in most parts of the continent, remain almost completely unavailable. A range of important contributing factors mean that it is now timely to reconsider the state of knowledge of Antarctic terrestrial prokaryotes. Rapid advances in molecular biological approaches are increasingly demonstrating that bacterial diversity in Antarctica may be far greater than previously thought, and that there is overlap in the environmental controls affecting both Antarctic prokaryotic and eukaryotic communities. Bacterial dispersal mechanisms and colonization patterns remain largely unaddressed, although evidence for regional evolutionary differentiation is rapidly accruing and, with this, there is increasing appreciation of patterns in regional bacterial biogeography in this large part of the globe. In this review, we set out to describe the state of knowledge of Antarctic prokaryote diversity patterns, drawing analogy with those of eukaryote

  16. The Application of Spatial Pattern Analysis in High School Level ...

    African Journals Online (AJOL)

    Geography is a vital subject of the school curriculum which is creative, practical and intellectually stimulating. It tries to identify features on the field, their spatial pattern as well as give explanations to process which have generated the observed distributional patterns their location and provide scientific explanation for the ...

  17. Landscape Metrics to Predict Soil Spatial Patterns

    Science.gov (United States)

    Gillin, C. P.; McGuire, K. J.; Bailey, S.; Prisley, S.

    2012-12-01

    Recent literature has advocated the application of hydropedology, or the integration of hydrology and pedology, to better understand hydrologic flowpaths and soil spatial heterogeneity in a landscape. Hydropedology can be used to describe soil units affected by distinct topography, geology, and hydrology. Such a method has not been applied to digital soil mapping in the context of spatial variations in hydrological and biogeochemical processes. The purpose of this study is to use field observations of soil morphology, geospatial information technology, and a multinomial logistic regression model to predict the distribution of five hydropedological units (HPUs) across a 41-hectare forested headwater catchment in New England. Each HPU reflects varying degrees of lateral flow influence on soil development. Ninety-six soil characterization pits were located throughout the watershed, and HPU type was identified at each pit based on the presence and thickness of genetic soil horizons. Digital terrain analysis was conducted using ArcGIS and SAGA software to compute topographic and landscape metrics. Results indicate that each HPU occurs under specific topographic settings that influence subsurface hydrologic conditions. Among the most important landscape metrics are distance from stream, distance from bedrock outcrop, upslope accumulated area, the topographic wetness index, the downslope index, and curvature. Our project is unique in that it delineates high resolution soil units using a process-based morphological approach rather than a traditional taxonomical method taken by conventional soil surveys. Hydropedological predictor models can be a valuable tool for informing forest and land management decisions, water quality planning, soil carbon accounting, and understanding subsurface hydrologic dynamics. They can also be readily calibrated for regions of differing geology, topography, and climate regimes.

  18. Balancing geo-privacy and spatial patterns in epidemiological studies

    Directory of Open Access Journals (Sweden)

    Chien-Chou Chen

    2017-11-01

    Full Text Available To balance the protection of geo-privacy and the accuracy of spatial patterns, we developed a geo-spatial tool (GeoMasker intended to mask the residential locations of patients or cases in a geographic information system (GIS. To elucidate the effects of geo-masking parameters, we applied 2010 dengue epidemic data from Taiwan testing the tool’s performance in an empirical situation. The similarity of pre- and post-spatial patterns was measured by D statistics under a 95% confidence interval. In the empirical study, different magnitudes of anonymisation (estimated Kanonymity ≥10 and 100 were achieved and different degrees of agreement on the pre- and post-patterns were evaluated. The application is beneficial for public health workers and researchers when processing data with individuals’ spatial information.

  19. Wavenumber locking and pattern formation in spatially forced systems

    International Nuclear Information System (INIS)

    Manor, Rotem; Meron, Ehud; Hagberg, Aric

    2009-01-01

    We study wavenumber locking and pattern formation resulting from weak spatially periodic one-dimensional forcing of two-dimensional systems. We consider systems that produce stationary or traveling stripe patterns when unforced and apply forcing aligned with the stripes. Forcing at close to twice the pattern wavenumber selects, stabilizes, or creates resonant stripes locked at half the forcing wavenumber. If the mismatch between the forcing and pattern wavenumber is high we find that the pattern still locks but develops a wave vector component perpendicular to the forcing direction and forms rectangular and oblique patterns. When the unforced system supports traveling waves, resonant rectangular patterns remain stationary but oblique patterns travel in a direction orthogonal to the traveling waves.

  20. Stand dynamics, spatial pattern and site quality in Austrocedrus chilensis forests in Patagonia, Argentina

    Directory of Open Access Journals (Sweden)

    S.L. Burns

    2013-07-01

    Full Text Available Aim of study: The objective of this study was to analyze the stand structure and spatial pattern of two A. chilensis stands with contrasting soil conditions and different site qualities in order to explore if these differences lead to patterns similar to the ones observed under different precipitation conditions.Area of study: The study was carried out in two stands located near the city of El Bolsón (41° 56’S - 71° 33’ W, Rio Negro, Argentina.Material and Methods: We evaluated age difference between canopy strata (upper and lower in two stands with different site qualities by means of a Mann-Whitney test. Dead individuals by diameter class were compared by means of a chi square test. Spatial distribution pattern was analyzed using the pair-correlation function and the mark-correlation function.Main results: Both sites exhibited a random spatial distribution of A. chilensis but different processes seem to underlie the patterns. In the low-quality site facilitation and continuous establishment led to a transient clumped spatial pattern. Mortality mediated by competition occurred mainly on small trees resulting in the current random pattern. On the other hand, spatial pattern in the high-quality site does not reflect a facilitation mediated recruitment. The upper strata established synchronously and subsequent regeneration was episodic.Research highlights: The results show that the differences in site quality may lead to different establishment spatial patterns, showing the importance of facilitation processes in sites with drier soil conditions and lower quality, although results may be site specific, due to the lack of replications.Keywords: Spatial analysis; regeneration; mortality; competition; facilitation.Abbreviations used:  LQ: low-quality site; HQ: high-quality site.

  1. Spatial patterns in vegetation fires in the Indian region.

    Science.gov (United States)

    Vadrevu, Krishna Prasad; Badarinath, K V S; Anuradha, Eaturu

    2008-12-01

    In this study, we used fire count datasets derived from Along Track Scanning Radiometer (ATSR) satellite to characterize spatial patterns in fire occurrences across highly diverse geographical, vegetation and topographic gradients in the Indian region. For characterizing the spatial patterns of fire occurrences, observed fire point patterns were tested against the hypothesis of a complete spatial random (CSR) pattern using three different techniques, the quadrat analysis, nearest neighbor analysis and Ripley's K function. Hierarchical nearest neighboring technique was used to depict the 'hotspots' of fire incidents. Of the different states, highest fire counts were recorded in Madhya Pradesh (14.77%) followed by Gujarat (10.86%), Maharastra (9.92%), Mizoram (7.66%), Jharkhand (6.41%), etc. With respect to the vegetation categories, highest number of fires were recorded in agricultural regions (40.26%) followed by tropical moist deciduous vegetation (12.72), dry deciduous vegetation (11.40%), abandoned slash and burn secondary forests (9.04%), tropical montane forests (8.07%) followed by others. Analysis of fire counts based on elevation and slope range suggested that maximum number of fires occurred in low and medium elevation types and in very low to low-slope categories. Results from three different spatial techniques for spatial pattern suggested clustered pattern in fire events compared to CSR. Most importantly, results from Ripley's K statistic suggested that fire events are highly clustered at a lag-distance of 125 miles. Hierarchical nearest neighboring clustering technique identified significant clusters of fire 'hotspots' in different states in northeast and central India. The implications of these results in fire management and mitigation were discussed. Also, this study highlights the potential of spatial point pattern statistics in environmental monitoring and assessment studies with special reference to fire events in the Indian region.

  2. Spatial pattern evaluation of a calibrated national hydrological model - a remote-sensing-based diagnostic approach

    Science.gov (United States)

    Mendiguren, Gorka; Koch, Julian; Stisen, Simon

    2017-11-01

    Distributed hydrological models are traditionally evaluated against discharge stations, emphasizing the temporal and neglecting the spatial component of a model. The present study widens the traditional paradigm by highlighting spatial patterns of evapotranspiration (ET), a key variable at the land-atmosphere interface, obtained from two different approaches at the national scale of Denmark. The first approach is based on a national water resources model (DK-model), using the MIKE-SHE model code, and the second approach utilizes a two-source energy balance model (TSEB) driven mainly by satellite remote sensing data. Ideally, the hydrological model simulation and remote-sensing-based approach should present similar spatial patterns and driving mechanisms of ET. However, the spatial comparison showed that the differences are significant and indicate insufficient spatial pattern performance of the hydrological model.The differences in spatial patterns can partly be explained by the fact that the hydrological model is configured to run in six domains that are calibrated independently from each other, as it is often the case for large-scale multi-basin calibrations. Furthermore, the model incorporates predefined temporal dynamics of leaf area index (LAI), root depth (RD) and crop coefficient (Kc) for each land cover type. This zonal approach of model parameterization ignores the spatiotemporal complexity of the natural system. To overcome this limitation, this study features a modified version of the DK-model in which LAI, RD and Kc are empirically derived using remote sensing data and detailed soil property maps in order to generate a higher degree of spatiotemporal variability and spatial consistency between the six domains. The effects of these changes are analyzed by using empirical orthogonal function (EOF) analysis to evaluate spatial patterns. The EOF analysis shows that including remote-sensing-derived LAI, RD and Kc in the distributed hydrological model adds

  3. Design patterns for instructional materials that foster proficiency at analyzing and interpreting complex geoscience data

    Science.gov (United States)

    Kastens, K. A.; Krumhansl, R.

    2016-12-01

    The Next Generation Science Standards incorporate a stronger emphasis on having students work with data than did prior standards. This emphasis is most obvious in Practice 4: Analyzing and Interpreting Data, but also permeates performance expectations built on Practice 2 when students test models, Practice 6 when students construct explanations, and Practice 7 when student test claims with evidence. To support curriculum developers who wish to guide high school students towards more sophisticated engagement with complex data, we analyzed a well-regarded body of instructional materials designed for use in introductory college courses (http://serc.carleton.edu/integrate/teaching_materials/). Our analysis sought design patterns that can be reused for a variety of topics at the high school or college level. We found five such patterns, each of which was used in at least half of the modules analyzed. We describe each pattern, provide an example, and hypothesize a theory of action that could explain how the sequence of activities leverages known perceptual, cognitive and/or social processes to foster learning from and about data. In order from most to least frequent, the observed design patterns are as follows: In Data Puzzles, students respond to guiding questions about high-value snippets of data pre-selected and sequenced by the curriculum developer to lead to an Aha! inference. In Pooling Data to See the Big Picture, small groups analyze different instances of analogous phenomenon (e.g. different hurricanes, or different divergent plate boundaries) and pool their insights to extract the commonalities that constitute the essence of that phenomenon. In Make a Decision or Recommendation, students combine geoscience data with other factors (such as economic or environmental justice concerns) to make a decision or recommendation about a human or societal action. In Predict-Observe-Explain, students make a prediction about what the Earth will look like under conditions

  4. Spatial Pattern Analysis of Heavy Metals in Beijing Agricultural Soils Based on Spatial Autocorrelation Statistics

    Science.gov (United States)

    Huo, Xiao-Ni; Zhang, Wei-Wei; Sun, Dan-Feng; Li, Hong; Zhou, Lian-Di; Li, Bao-Guo

    2011-01-01

    This study explored the spatial pattern of heavy metals in Beijing agricultural soils using Moran’s I statistic of spatial autocorrelation. The global Moran’s I result showed that the spatial dependence of Cr, Ni, Zn, and Hg changed with different spatial weight matrixes, and they had significant and positive global spatial correlations based on distance weight. The spatial dependence of the four metals was scale-dependent on distance, but these scale effects existed within a threshold distance of 13 km, 32 km, 50 km, and 29 km, respectively for Cr, Ni, Zn, and Hg. The maximal spatial positive correlation range was 57 km, 70 km, 57 km, and 55 km for Cr, Ni, Zn, and Hg, respectively and these were not affected by sampling density. Local spatial autocorrelation analysis detected the locations of spatial clusters and spatial outliers and revealed that the pollution of these four metals occurred in significant High-high spatial clusters, Low-high, or even High-low spatial outliers. Thus, three major areas were identified and should be receiving more attention: the first was the northeast region of Beijing, where Cr, Zn, Ni, and Hg had significant increases. The second was the southeast region of Beijing where wastewater irrigation had strongly changed the content of metals, particularly of Cr and Zn, in soils. The third area was the urban fringe around city, where Hg showed a significant increase. PMID:21776217

  5. Spatial patterns and associations between species belonging to four genera of the Lauraceae family.

    Directory of Open Access Journals (Sweden)

    Lin Li

    Full Text Available Spatial distribution pattern of biological related species present unique opportunities and challenges to explain species coexistence. In this study, we explored the spatial distributions and associations among congeneric species at both the species and genus levels to explain their coexistence through examining the similarities and differences at these two levels. We first used DNA and cluster analysis to confirmed the relative relationship of eight species within a 20 ha subtropical forest in southern China. We compared Diameter at breast height (DBH classes, aggregation intensities and spatial patterns, associations, and distributions of four closely related species pairs to reveal similarities and differences at the species and genus levels. These comparisons provided insight into the mechanisms of coexistence of these congeners. O-ring statistics were used to measure spatial patterns of species. Ω0-10, the mean conspecific density within 10 m of a tree, was used as a measure of the intensity of aggregation of a species, and g-function was used to analyze spatial associations. Our results suggested that spatial aggregations were common, but the differences between spatial patterns were reduced at the genus level. Aggregation intensity clearly reduced at the genus level. Negative association frequencies decreased at the genus level, such that independent association was commonplace among all four genera. Relationships between more closely related species appeared to be more competitive at both the species and genus levels. The importance of competition on interactions is most likely influenced by similarity in lifestyle, and the habitat diversity within the species' distribution areas. Relatives with different lifestyles likely produce different distribution patterns through different interaction process. In order to fully understand the mechanisms generating spatial distributions of coexisting siblings, further research is required to

  6. Implications of Spatial Pattern of Social Infrastructure Stock in the ...

    African Journals Online (AJOL)

    ... study examines the levels of stock of social infrastructure and the spatial pattern of development in rural areas of Akwa Ibom State. Empirical and theoretical approaches were employed in the investigation and data on 21 social indicator variables/surrogates were collected from 50 villages in the state using questionnaire, ...

  7. The effect of spatial planning patterns on distribution of pedestrians ...

    African Journals Online (AJOL)

    Abstract. This study focuses on public spaces of residential neighbourhoods in the City of Nairobi. It establishes various spatial characteristics, hence patterns, that have a bearing on the distribution of pedestrians therein. A higher encounter rate of pedestrians is a desirable public space quality given that the higher degree ...

  8. Spatial patterns and determinants of fertility levels among women of ...

    African Journals Online (AJOL)

    Background: Despite aggressive measures to control the population in Nigeria, the population of Nigeria still remains worrisome. Increased birth rates have significantly contributed to Nigeria being referred to as the most populous country in Africa. This study analyses spatial patterns and contributory factors to fertility levels ...

  9. Spatial patterns of encroaching shrub species under different ...

    African Journals Online (AJOL)

    ... in Middelburg (Eastern Cape, South Africa) coexist and partition space under different grazing regimes (viz. continuous rest, and continuous, summer and winter grazing). We used point-pattern analysis to assess the spatial ecology of these species. We also used an index of integration (mingling index), where low values ...

  10. Development of Spatial Distribution Patterns by Biofilm Cells

    DEFF Research Database (Denmark)

    Haagensen, Janus Anders Juul; Hansen, Susse Kirkelund; Bak Christensen, Bjarke

    2015-01-01

    Confined spatial patterns of microbial distribution are prevalent in nature, such as in microbial mats, soil communities, and water stream biofilms. The symbiotic two-species consortium of Pseudomonas putida and Acinetobacter sp. C6, originally isolated from a creosote-polluted aquifer, has evolved...

  11. A Spatial Analysis of Population Distribution and Housing Patterns ...

    African Journals Online (AJOL)

    ... administered using the stratified randomsampling technique. The study area was divided into three major zones based on existing quarters in Abraka. The Pearson product moment correlation was used to measure the strength of the relationship between the spatial patterns of population and housing in Abraka. Solutions ...

  12. Spatial pattern of diarrhea based on regional economic and environment by spatial autoregressive model

    Science.gov (United States)

    Bekti, Rokhana Dwi; Nurhadiyanti, Gita; Irwansyah, Edy

    2014-10-01

    The diarrhea case pattern information, especially for toddler, is very important. It is used to show the distribution of diarrhea in every region, relationship among that locations, and regional economic characteristic or environmental behavior. So, this research uses spatial pattern to perform them. This method includes: Moran's I, Spatial Autoregressive Models (SAR), and Local Indicator of Spatial Autocorrelation (LISA). It uses sample from 23 sub districts of Bekasi Regency, West Java, Indonesia. Diarrhea case, regional economic, and environmental behavior of households have a spatial relationship among sub district. SAR shows that the percentage of Regional Gross Domestic Product is significantly effect on diarrhea at α = 10%. Therefore illiteracy and health center facilities are significant at α = 5%. With LISA test, sub districts in southern Bekasi have high dependencies with Cikarang Selatan, Serang Baru, and Setu. This research also builds development application that is based on java and R to support data analysis.

  13. 1986 wet deposition temporal and spatial patterns in North America

    Energy Technology Data Exchange (ETDEWEB)

    Olsen, A.R.

    1989-07-01

    The focus of this report is on North American wet deposition temporal patterns from 1979 to 1986 and spatial patterns for 1986. The report provides statistical distribution summaries of annual precipitation-weighted average concentration and annual deposition for nine ion species: hydrogen, sulfate, nitrate, ammonium, calcium, chloride, sodium, potassium, and magnesium. The data in the report are from the Acid Depositing System (ADS) for the statistical reporting of North American deposition data. Isopleth maps, based on surface estimation using kriging, display concentration and deposition spatial patterns of pH, hydrogen, sulfate, nitrate, ammonium, and calcium ion species for 1986 annual, winter, and summer periods. The temporal pattern analyses use a subset of 30 sites over an 8-year (1979-1986) period and an expanded subset of 137 sites with greater spatial coverage over a 5-year (1982-1986) period. The 8-year period represents the longest period with wet deposition monitoring data unavailable that has a sufficient number of sites with data of known quality to allow a descriptive summary of annual temporal patterns. 19 refs., 105 figs., 29 tabs.

  14. Achieving pattern uniformity in plasmonic lithography by spatial frequency selection

    Science.gov (United States)

    Liang, Gaofeng; Chen, Xi; Zhao, Qing; Guo, L. Jay

    2018-01-01

    The effects of the surface roughness of thin films and defects on photomasks are investigated in two representative plasmonic lithography systems: thin silver film-based superlens and multilayer-based hyperbolic metamaterial (HMM). Superlens can replicate arbitrary patterns because of its broad evanescent wave passband, which also makes it inherently vulnerable to the roughness of the thin film and imperfections of the mask. On the other hand, the HMM system has spatial frequency filtering characteristics and its pattern formation is based on interference, producing uniform and stable periodic patterns. In this work, we show that the HMM system is more immune to such imperfections due to its function of spatial frequency selection. The analyses are further verified by an interference lithography system incorporating the photoresist layer as an optical waveguide to improve the aspect ratio of the pattern. It is concluded that a system capable of spatial frequency selection is a powerful method to produce deep-subwavelength periodic patterns with high degree of uniformity and fidelity.

  15. The Spatial Patterns of Dairy Farming In Molise

    Directory of Open Access Journals (Sweden)

    Ievoli Corrado

    2017-12-01

    Full Text Available The greater market orientation of European dairy production, caused by the end of quota regime, is likely to have consequences on less favoured areas, where breeding of dairy cattle plays both a crucial socio-economic and environmental role. Within this new framework, endogenous factors determining spatial reorganisation of the sector are becoming of increasing relevance. Based on these considerations, this study analyses the impact of the three broader classes of location determinants suggested by economic theory - factor endowment, market potential, and spatial agglomeration externalities - on the spatial pattern of milk production in Molise, a rural region in the south of Italy. Milk production is measured in term of dairy cows per hectare. The truncated distribution of this variable and its high degree of spatial autocorrelation prompted us to apply a Spatial Autoregressive Tobit model. Estimation results reveal that all three categories have a positive effect on the location of milk production, even if the influence of factor endowment (intended as forage area, and market potential (measured in term of proximity of dairy companies is quite limited. On the contrary, the impact of spatial externalities (related variety on the regional localisation of milk production is strongly significant. These results cast some doubts on the current measures of intervention and might suggest a new policy framework both at firm and spatial level

  16. Modelling spatial patterns of urban growth in Africa

    Science.gov (United States)

    Linard, Catherine; Tatem, Andrew J.; Gilbert, Marius

    2013-01-01

    The population of Africa is predicted to double over the next 40 years, driving exceptionally high urban expansion rates that will induce significant socio-economic, environmental and health changes. In order to prepare for these changes, it is important to better understand urban growth dynamics in Africa and better predict the spatial pattern of rural-urban conversions. Previous work on urban expansion has been carried out at the city level or at the global level with a relatively coarse 5–10 km resolution. The main objective of the present paper was to develop a modelling approach at an intermediate scale in order to identify factors that influence spatial patterns of urban expansion in Africa. Boosted Regression Tree models were developed to predict the spatial pattern of rural-urban conversions in every large African city. Urban change data between circa 1990 and circa 2000 available for 20 large cities across Africa were used as training data. Results showed that the urban land in a 1 km neighbourhood and the accessibility to the city centre were the most influential variables. Results obtained were generally more accurate than results obtained using a distance-based urban expansion model and showed that the spatial pattern of small, compact and fast growing cities were easier to simulate than cities with lower population densities and a lower growth rate. The simulation method developed here will allow the production of spatially detailed urban expansion forecasts for 2020 and 2025 for Africa, data that are increasingly required by global change modellers. PMID:25152552

  17. Spatial implications of covariate adjustment on patterns of risk

    DEFF Research Database (Denmark)

    Sabel, Clive Eric; Wilson, Jeff Gaines; Kingham, Simon

    2007-01-01

    localised factors that influence the exposure-response relationship. This paper examines the spatial patterns of relative risk and clusters of hospitalisations based on an illustrative small-area example from Christchurch, New Zealand. A four-stage test of the spatial relocation effects of covariate...... adjustment was performed. First, relative risks for respiratory hospitalisations from 1999 to 2004 at the census area unit level were adjusted for age and sex. In three subsequent tests, admissions were adjusted for annual exposure to particulate matter less than 10?m in diameter (PM10...

  18. Behavioral states may be associated with distinct spatial patterns in electrocorticogram.

    Science.gov (United States)

    Panagiotides, Heracles; Freeman, Walter J; Holmes, Mark D; Pantazis, Dimitrios

    2011-03-01

    To determine if behavioral states are associated with unique spatial electrocorticographic (ECoG) patterns, we obtained recordings with a microgrid electrode array applied to the cortical surface of a human subject. The array was constructed with the intent of extracting maximal spatial information by optimizing interelectrode distances. A 34-year-old patient with intractable epilepsy underwent intracranial ECoG monitoring after standard methods failed to reveal localization of seizures. During the 8-day period of invasive recording, in addition to standard clinical electrodes a square 1 × 1 cm microgrid array with 64 electrodes (1.25 mm separation) was placed on the right inferior temporal gyrus. Careful review of video recordings identified four extended naturalistic behaviors: reading, conversing on the telephone, looking at photographs, and face-to-face interactions. ECoG activity recorded with the microgrid that corresponded to these behaviors was collected and ECoG spatial patterns were analyzed. During periods of ECoG selected for analysis, no electrographic seizures or epileptiform patterns were present. Moments of maximal spatial variance are shown to cluster by behavior. Comparisons between conditions using a permutation test reveal significantly different spatial patterns for each behavior. We conclude that ECoG recordings obtained on the cortical surface with optimal high spatial frequency resolution reveal distinct local spatial patterns that reflect different behavioral states, and we predict that similar patterns will be found in many if not most cortical areas on which a microgrid is placed.

  19. Environmental controls on multiscale spatial patterns of salt marsh vegetation

    DEFF Research Database (Denmark)

    Kim, Daehyun; Cairns, David; Bartholdy, Jesper

    2010-01-01

    In coastal environments, biogeographic patterns are generally influenced by surface elevation and horizontal distance from sea water. However, it is still unclear whether these major topographic factors are significant controls of vegetation patterns across spatial scales at which different...... physical processes operate. This study investigated such a topography-vegetation relationship in a Danish salt marsh, focusing upon two scales: a macro-scale (ca. 500 m) across the marsh platform, encompassing seaward and landward areas, and a meso-scale ( ca. 25 m) across tidal creeks. While long-term sea......-level variation and grazing influenced the macro-scale pattern, short-term fluvial-geomorphic processes drove the meso-scale pattern. Despite these different underlying processes, similar floristic gradient structures between the two scales were identified by nonmetric multidimensional scaling. The gradient...

  20. Spatial pattern formation induced by Gaussian white noise.

    Science.gov (United States)

    Scarsoglio, Stefania; Laio, Francesco; D'Odorico, Paolo; Ridolfi, Luca

    2011-02-01

    The ability of Gaussian noise to induce ordered states in dynamical systems is here presented in an overview of the main stochastic mechanisms able to generate spatial patterns. These mechanisms involve: (i) a deterministic local dynamics term, accounting for the local rate of variation of the field variable, (ii) a noise component (additive or multiplicative) accounting for the unavoidable environmental disturbances, and (iii) a linear spatial coupling component, which provides spatial coherence and takes into account diffusion mechanisms. We investigate these dynamics using analytical tools, such as mean-field theory, linear stability analysis and structure function analysis, and use numerical simulations to confirm these analytical results. Copyright © 2010 Elsevier Inc. All rights reserved.

  1. Variable gene dispersal conditions and spatial deforestation patterns can interact to affect tropical tree conservation outcomes.

    Directory of Open Access Journals (Sweden)

    Yamini Kashimshetty

    Full Text Available Tropical lowland rain forest (TLRF biodiversity is under threat from anthropogenic factors including deforestation which creates forest fragments of different sizes that can further undergo various internal patterns of logging. Such interventions can modify previous equilibrium abundance and spatial distribution patterns of offspring recruitment and/or pollen dispersal. Little is known about how these aspects of deforestation and fragmentation might synergistically affect TLRF tree recovery demographics and population genetics in newly formed forest fragments. To investigate these TLRF anthropogenic disturbance processes we used the computer program NEWGARDEN (NG, which models spatially-explicit, individual-based plant populations, to simulate 10% deforestation in six different spatial logging patterns for the plant functional type of a long-lived TLRF canopy tree species. Further, each logging pattern was analyzed under nine varying patterns of offspring versus pollen dispersal distances that could have arisen post-fragmentation. Results indicated that gene dispersal condition (especially via offspring had a greater effect on population growth and genetic diversity retention (explaining 98.5% and 88.8% of the variance respectively than spatial logging pattern (0.2% and 4.7% respectively, with 'Near' distance dispersal maximizing population growth and genetic diversity relative to distant dispersal. Within logged regions of the fragment, deforestation patterns closer to fragment borders more often exhibited lower population recovery rates and founding genetic diversity retention relative to more centrally located logging. These results suggest newly isolated fragments have populations that are more sensitive to the way in which their offspring and pollen dispersers are affected than the spatial pattern in which subsequent logging occurs, and that large variation in the recovery rates of different TLRF tree species attributable to altered gene

  2. Variable gene dispersal conditions and spatial deforestation patterns can interact to affect tropical tree conservation outcomes.

    Science.gov (United States)

    Kashimshetty, Yamini; Pelikan, Stephan; Rogstad, Steven H

    2015-01-01

    Tropical lowland rain forest (TLRF) biodiversity is under threat from anthropogenic factors including deforestation which creates forest fragments of different sizes that can further undergo various internal patterns of logging. Such interventions can modify previous equilibrium abundance and spatial distribution patterns of offspring recruitment and/or pollen dispersal. Little is known about how these aspects of deforestation and fragmentation might synergistically affect TLRF tree recovery demographics and population genetics in newly formed forest fragments. To investigate these TLRF anthropogenic disturbance processes we used the computer program NEWGARDEN (NG), which models spatially-explicit, individual-based plant populations, to simulate 10% deforestation in six different spatial logging patterns for the plant functional type of a long-lived TLRF canopy tree species. Further, each logging pattern was analyzed under nine varying patterns of offspring versus pollen dispersal distances that could have arisen post-fragmentation. Results indicated that gene dispersal condition (especially via offspring) had a greater effect on population growth and genetic diversity retention (explaining 98.5% and 88.8% of the variance respectively) than spatial logging pattern (0.2% and 4.7% respectively), with 'Near' distance dispersal maximizing population growth and genetic diversity relative to distant dispersal. Within logged regions of the fragment, deforestation patterns closer to fragment borders more often exhibited lower population recovery rates and founding genetic diversity retention relative to more centrally located logging. These results suggest newly isolated fragments have populations that are more sensitive to the way in which their offspring and pollen dispersers are affected than the spatial pattern in which subsequent logging occurs, and that large variation in the recovery rates of different TLRF tree species attributable to altered gene dispersal

  3. Identifying, characterizing and predicting spatial patterns of lacustrine groundwater discharge

    Directory of Open Access Journals (Sweden)

    C. Tecklenburg

    2017-10-01

    Full Text Available Lacustrine groundwater discharge (LGD can significantly affect lake water balances and lake water quality. However, quantifying LGD and its spatial patterns is challenging because of the large spatial extent of the aquifer–lake interface and pronounced spatial variability. This is the first experimental study to specifically study these larger-scale patterns with sufficient spatial resolution to systematically investigate how landscape and local characteristics affect the spatial variability in LGD. We measured vertical temperature profiles around a 0.49 km2 lake in northeastern Germany with a needle thermistor, which has the advantage of allowing for rapid (manual measurements and thus, when used in a survey, high spatial coverage and resolution. Groundwater inflow rates were then estimated using the heat transport equation. These near-shore temperature profiles were complemented with sediment temperature measurements with a fibre-optic cable along six transects from shoreline to shoreline and radon measurements of lake water samples to qualitatively identify LGD patterns in the offshore part of the lake. As the hydrogeology of the catchment is sufficiently homogeneous (sandy sediments of a glacial outwash plain; no bedrock control to avoid patterns being dominated by geological discontinuities, we were able to test the common assumptions that spatial patterns of LGD are mainly controlled by sediment characteristics and the groundwater flow field. We also tested the assumption that topographic gradients can be used as a proxy for gradients of the groundwater flow field. Thanks to the extensive data set, these tests could be carried out in a nested design, considering both small- and large-scale variability in LGD. We found that LGD was concentrated in the near-shore area, but alongshore variability was high, with specific regions of higher rates and higher spatial variability. Median inflow rates were 44 L m−2 d−1 with

  4. Identifying, characterizing and predicting spatial patterns of lacustrine groundwater discharge

    Science.gov (United States)

    Tecklenburg, Christina; Blume, Theresa

    2017-10-01

    Lacustrine groundwater discharge (LGD) can significantly affect lake water balances and lake water quality. However, quantifying LGD and its spatial patterns is challenging because of the large spatial extent of the aquifer-lake interface and pronounced spatial variability. This is the first experimental study to specifically study these larger-scale patterns with sufficient spatial resolution to systematically investigate how landscape and local characteristics affect the spatial variability in LGD. We measured vertical temperature profiles around a 0.49 km2 lake in northeastern Germany with a needle thermistor, which has the advantage of allowing for rapid (manual) measurements and thus, when used in a survey, high spatial coverage and resolution. Groundwater inflow rates were then estimated using the heat transport equation. These near-shore temperature profiles were complemented with sediment temperature measurements with a fibre-optic cable along six transects from shoreline to shoreline and radon measurements of lake water samples to qualitatively identify LGD patterns in the offshore part of the lake. As the hydrogeology of the catchment is sufficiently homogeneous (sandy sediments of a glacial outwash plain; no bedrock control) to avoid patterns being dominated by geological discontinuities, we were able to test the common assumptions that spatial patterns of LGD are mainly controlled by sediment characteristics and the groundwater flow field. We also tested the assumption that topographic gradients can be used as a proxy for gradients of the groundwater flow field. Thanks to the extensive data set, these tests could be carried out in a nested design, considering both small- and large-scale variability in LGD. We found that LGD was concentrated in the near-shore area, but alongshore variability was high, with specific regions of higher rates and higher spatial variability. Median inflow rates were 44 L m-2 d-1 with maximum rates in certain locations going

  5. Analyzing spatial and temporal trends in Aboveground Biomass within the Acadian New England Forests using the complete Landsat Archive

    Science.gov (United States)

    Kilbride, J. B.; Fraver, S.; Ayrey, E.; Weiskittel, A.; Braaten, J.; Hughes, J. M.; Hayes, D. J.

    2017-12-01

    Forests within the New England states and Canadian Maritime provinces, here described as the Acadian New England (ANE) forests, have undergone substantial disturbances due to insect, fire, and anthropogenic factors. Through repeated satellite observations captures by USGS's Landsat program, 45 years of disturbance information can be incorporated into modeling efforts to better understand the spatial and temporal trends in forest above ground biomass (AGB). Using Google's Earth Engine, annual mosaics were developed for the ANE study area and then disturbance and recovery metrics were developed using the temporal segmentation algorithm VeRDET. Normalization procedures were developed to incorporate the Landsat Multispectral Scanner (MSS, 1972 - 1985) data alongside the modern era of Landsat Thematic Mapper (TM, 1984-2013), Enhanced Thematic Mapper plus (ETM+, 1999 - present), and Operational Land Imager (OLI, 2013- present) data products. This has enabled the creation of a dataset with an unprecedented spatial and temporal view of forest landscape change. Model training was performed using was the Forest Inventory Analysis (FIA) and New Brunswick Permanent Sample Plot data datasets. Modeling was performed using parametric techniques such as mixed effects models and non-parametric techniques such as k-NN imputation and generalized boosted regression. We compare the biomass estimate and model accuracy to other inventory and modeling studies produced within this study area. The spatial and temporal patterns of stock changes are analyzed against resource policy, land ownership changes, and forest management.

  6. Spatial patterns of cyanobacterial mat growth on sand ripples

    Science.gov (United States)

    Mariotti, G.; Klepac-Ceraj, V.; Perron, J. T.; Bosak, T.

    2016-02-01

    Photosynthetic microbial mats produce organic matter, cycle nutrients, bind pollutants and stabilize sediment in sandy marine environments. Here, we investigate the influence of bedforms and wave motion on the growth rate, composition and spatial variability of microbial mats by growing cyanobacterial mats on a rippled bed of carbonate sand in a wave tank. The tank was forced with an oscillatory flow with velocities below the threshold for sediment motion yet able to induce a porewater flow within the sediment. Different spatial patterns developed in mats depending on the initial biochemistry of the water medium. When growing in a medium rich in nitrogen, phosphorous and micronutrients, mats grew faster on ripple troughs than on ripple crests. After two months, mats covered the bed surface uniformly, and the microbial communities on the crests and in the troughs had similar compositions. Differences in bed shear stress and nutrient availability between crests and troughs were not able to explain the faster growth in the troughs. We hypothesize that this growth pattern is due to a "strainer" effect, i.e. the suspended bacteria from the inoculum were preferentially delivered to troughs by the wave-induced porewater flow. In the experiments initiated in a medium previously used up by a microbial mat and thus depleted in nutrients, mats grew preferentially on the ripple crests. This spatial pattern persisted for nearly two years, and the microbial composition on troughs and crests was different. We attribute this pattern to the upwelling of porewater in the crests, which increased the delivery of nutrients from sediment to the cyanobacteria on the bed surface. Thus, the macroscopic patterns formed by photosynthetic microbial mats on sand ripples may be used to infer whether mats are nutrient-limited and whether they are recently colonized or older than a month.

  7. Spatial Pattern, Transportation and Air Quality Nexus: The Case of Iskandar Malaysia

    Directory of Open Access Journals (Sweden)

    Azalia Mohd Yusop

    2016-09-01

    Full Text Available Spatial pattern, transportation, and air quality are three development entities which significantly affecting one another. This nexus exhibits the urbanization imprint accouter transportation generating air pollution as a reflection of spatial distribution. The integration among them is a vital part of development as it affects the societal living environment. It provides unfavorable air quality and directly cause health problems. The developing region of Iskandar Malaysia exhibits huge spatial distribution transformation accompanied by large percentage of urbanization rate, but seems less integration of land use and transportation planning which causes the exaggeration of air pollution. We carry out the research on the nexus of spatial distribution, transportation and air quality in Iskandar Malaysia by analyzing and evaluating the interconnectivity of these three entities. The spatial analysis and evaluation on the land use development pattern and spatial policy shows that the Iskandar development region are growing in the polycentric manners, where the spatial development policy drives the distributional growth of new sub-centers. We undertook a household-based travel survey that reveals the poly-centricity reflected by the de-concentration of workplaces which shifted from the single point towards multiple centers. On the other hand, this phenomenon has created a distributional traffic pattern amid the high dependency on the private vehicles of the citizens in Iskandar Malaysia. With a predominantly fossil fuel consuming vehicles, this has generated air pollution. Based on the traffic survey and the dependency of the citizens on private cars for their daily mobility, the concentration of air pollution is seemingly at risk. This research reflects that Iskandar Malaysia development region currently undergoes towards polycentric development with some new urban centers. We found that land use and transportation planning policies require serious

  8. spsann - optimization of sample patterns using spatial simulated annealing

    Science.gov (United States)

    Samuel-Rosa, Alessandro; Heuvelink, Gerard; Vasques, Gustavo; Anjos, Lúcia

    2015-04-01

    There are many algorithms and computer programs to optimize sample patterns, some private and others publicly available. A few have only been presented in scientific articles and text books. This dispersion and somewhat poor availability is holds back to their wider adoption and further development. We introduce spsann, a new R-package for the optimization of sample patterns using spatial simulated annealing. R is the most popular environment for data processing and analysis. Spatial simulated annealing is a well known method with widespread use to solve optimization problems in the soil and geo-sciences. This is mainly due to its robustness against local optima and easiness of implementation. spsann offers many optimizing criteria for sampling for variogram estimation (number of points or point-pairs per lag distance class - PPL), trend estimation (association/correlation and marginal distribution of the covariates - ACDC), and spatial interpolation (mean squared shortest distance - MSSD). spsann also includes the mean or maximum universal kriging variance (MUKV) as an optimizing criterion, which is used when the model of spatial variation is known. PPL, ACDC and MSSD were combined (PAN) for sampling when we are ignorant about the model of spatial variation. spsann solves this multi-objective optimization problem scaling the objective function values using their maximum absolute value or the mean value computed over 1000 random samples. Scaled values are aggregated using the weighted sum method. A graphical display allows to follow how the sample pattern is being perturbed during the optimization, as well as the evolution of its energy state. It is possible to start perturbing many points and exponentially reduce the number of perturbed points. The maximum perturbation distance reduces linearly with the number of iterations. The acceptance probability also reduces exponentially with the number of iterations. R is memory hungry and spatial simulated annealing is a

  9. Spatial Patterns of Soil Organic Carbon and Total Nitrogen in Mesquite Coppice Dunes

    Science.gov (United States)

    Ebbs, L. M.; Throop, H. L.

    2008-12-01

    Woody encroachment, an increase in woody plant abundance in formerly grass-dominated ecosystems, has occurred in semi-arid and arid systems worldwide over the past century. Woody encroachment has emerged as a potentially important, but highly uncertain, component of the North American carbon sink. The effects of woody plant encroachment on soil organic carbon (SOC) and total nitrogen (TN) relative to Prosopis velutina have been explored in the Sonoran Desert, where strong spatial patterns in SOC and TN based on shrub size and subcanopy location exist. Encroachment of Prosopis glandulosa in sandy soils in the Chihuahuan Desert leads to coppice dune formation. We applied spatially-intensive soil sampling methods around P. glandulosa dunes in the Chihuahuan Desert to see how spatial patterns differed from patterns in the Sonoran Desert, where dunes do not form. Approximately 15 soil cores were taken from within and around each of 13 dunes and analyzed for bulk density, SOC, and TN. The aboveground biomass of P. glandulosa in coppice dunes was also collected for a comparison of aboveground biomass and SOC pools. Intercanopy soils had greater bulk density than soils within dunes (Pglandulosa coppice dunes does not require information on individual dune size or spatial position. The differences in SOC and TN accumulation patterns beneath P. velutina and P. glandulosa may result from differences in shrub morphology and its consequences for patterns of aeolian erosion and deposition.

  10. Spatial patterns of plastic debris along Estuarine shorelines.

    Science.gov (United States)

    Browne, Mark A; Galloway, Tamara S; Thompson, Richard C

    2010-05-01

    The human population generates vast quantities of waste material. Macro (>1 mm) and microscopic (plastic debris represent a substantial contamination problem. Here, we test hypotheses about the influence of wind and depositional regime on spatial patterns of micro- and macro-plastic debris within the Tamar Estuary, UK. Debris was identified to the type of polymer using Fourier-transform infrared spectroscopy (FT-IR) and categorized according to density. In terms of abundance, microplastic accounted for 65% of debris recorded and mainly comprised polyvinylchloride, polyester, and polyamide. Generally, there were greater quantities of plastic at downwind sites. For macroplastic, there were clear patterns of distribution for less dense items, while for microplastic debris, clear patterns were for denser material. Small particles of sediment and plastic are both likely to settle slowly from the water-column and are likely to be transported by the flow of water and be deposited in areas where the movements of water are slower. There was, however, no relationship between the abundance of microplastic and the proportion of clay in sediments from the strandline. These results illustrate how FT-IR spectroscopy can be used to identify the different types of plastic and in this case was used to indicate spatial patterns, demonstrating habitats that are downwind acting as potential sinks for the accumulation of debris.

  11. Rethinking efficiency in acute care nursing units: analyzing nursing unit layouts for improved spatial flow.

    Science.gov (United States)

    Zadeh, Rana Sagha; Shepley, Mardelle McCuskey; Waggener, Laurie Tranchina

    2012-01-01

    This paper introduces a new design tool to increase efficiency in acute care settings. This visual tool facilitates matching spatial flow with caregivers' workflow to reduce waste and redundancies, as recommended by Lean thinking. Providing work environments that protect caregivers from fatigue, interruptions, and redundancies can contribute to quality patient care. By studying the Guidelines for Design and Construction of Health Care Facilities and reviewing the literature, the authors identified the main clinical spaces supporting nursing care and their important linkages. Space syntax, a diagrammatic analysis of relationships, was used to decode spatial relationships among the clinical spaces in five case studies. The movement distributions were measured and possible conflicts with focus-demanding tasks, such as noise and interruptions, were identified. The information was summarized in a visual diagram providing the "syntactic anatomy" of the most important work spaces. The main clinical spaces were the following: (1) patient corridor; (2) nurses' station; (3) medication area; (4) clean room; (5) soiled room; (6) physicians' dictation area; (7) report room; (8) restricted nourishment area; (9) equipment storage; and (10) unrestricted nourishment area. The report room, nourishment area, and physician workspace showed strong linkages to the patient corridor and nurses' station, although such spaces were not clearly discussed in the design guidelines. The most caregiver movement occurs in the patient corridor and nurses' station. These areas pose the greatest possibility of interruptions by persons. The results were translated into a visual design efficiency checklist. Illustrating the spatial order of the support spaces-and comparing that to use patterns-enables designers to reduce the movement sequences nurses undertake when accessing resources and identify where the flow is disrupted by "displaced" functions.

  12. Spatial pattern of agricultural land conversion in West Java Province

    Science.gov (United States)

    Maryati, S.; Humaira, A. N. S.; Pratiwi, F.

    2018-03-01

    Population growth has an implication on increasing demand for land. The demand for built-up area is filled by land conversion, mostly from agricultural land. On the other hand, population growth requires an increase in food production as well as land for agriculture. Conversion of agricultural land can threaten the availability and food security. The purpose of this study is to identify the spatial pattern of changes in agricultural land in West Java Province as input to improve food security condition in this province. Descriptive statistics and spatial analysis were used to analyse the area of agricultural land, conversion of agricultural land, and spatial pattern of changes in agricultural land in West Java Province. The data used is time series data in the period of 2005-2014. The result of analysis shows that there are still areas with a high percentage of agricultural land in West Java Province. The rate of conversion of agricultural land varies widely. Cities or regions with very high land conversion rate tend to concentrate in metropolitan areas.

  13. A state-and-transition model of Iberian dehesas based on spatial patterns

    Directory of Open Access Journals (Sweden)

    Jesús Caballero

    2015-08-01

    Full Text Available Aim of study: In this study a process based on a Geographic Information System (GIS is proposed as a tool for analyzing the spatial structure of the Mediterranean dehesa ecosystem. Area of study: Western Peninsular Spain. Material and methods: The method allows a semi-quantitative “state and transitions” (S&T net that provides original information derived from spatial patterns that cannot be obtained by other means. Main results: This GIS analysis also supplies a spatial basis which complements the conceptual framework of vegetation series successional proposals. Moreover, the proposed method can be a useful tool for understanding landscape changes. Research highlights: Our work proposes not only a descriptive model but also a methodology based on spatial metrics and topological relationships.

  14. An Adaptive Method for Mining Hierarchical Spatial Co-location Patterns

    Directory of Open Access Journals (Sweden)

    CAI Jiannan

    2016-04-01

    Full Text Available Mining spatial co-location patterns plays a key role in spatial data mining. Spatial co-location patterns refer to subsets of features whose objects are frequently located in close geographic proximity. Due to spatial heterogeneity, spatial co-location patterns are usually not the same across geographic space. However, existing methods are mainly designed to discover global spatial co-location patterns, and not suitable for detecting regional spatial co-location patterns. On that account, an adaptive method for mining hierarchical spatial co-location patterns is proposed in this paper. Firstly, global spatial co-location patterns are detected and other non-prevalent co-location patterns are identified as candidate regional co-location patterns. Then, for each candidate pattern, adaptive spatial clustering method is used to delineate localities of that pattern in the study area, and participation ratio is utilized to measure the prevalence of the candidate co-location pattern. Finally, an overlap operation is developed to deduce localities of (k+1-size co-location patterns from localities of k-size co-location patterns. Experiments on both simulated and real-life datasets show that the proposed method is effective for detecting hierarchical spatial co-location patterns.

  15. Retrieval of Spatial Join Pattern Instances from Sensor Networks

    DEFF Research Database (Denmark)

    Yiu, Man Lung; Mamoulis, Nikos; Bakiras, Spiridon

    2009-01-01

    We study the continuous evaluation of spatial join queries and extensions thereof, defined by interesting combinations of sensor readings (events) that co-occur in a spatial neighborhood. An example of such a pattern is "a high temperature reading in the vicinity of at least four high-pressure re...... for sensing, and network topology. Finally, we experimentally compare the effectiveness of the proposed solutions on an experimental platform that emulates real sensor networks.......-pressure readings". We devise protocols for `in-network' evaluation of this class of queries, aiming at the minimization of power consumption. In addition, we develop cost models that suggest the appropriateness of each protocol, based on various factors, including selectivity of query elements, energy requirements...

  16. Spatial patterns of ENSO's interannual influences on lilacs vary with time and periodicity

    Science.gov (United States)

    Fu, Congsheng; Ji, Zhenming; Wei, Zhongwang

    2017-04-01

    The influences of solar activity and large-scale climate modes (e.g. the El Niño/Southern Oscillation - 'ENSO') have been identified in many geophysical processes. However, few studies have attempted to investigate the frequency characteristics and corresponding spatial patterns of the interannual influence of either solar activity or large-scale climate modes on phenology. In this study, the influences of solar activity (represented by sunspot number 'SSN') and ENSO on the first leaf and bloom dates of the common lilac and cloned lilac in the United States were analyzed for time series spanning ≥ 33 years using the wavelet coherence method. The spatial patterns in the influence of ENSO on the first leaf and bloom dates were investigated for different times and periodicities, using time series of ≥ 20 years. The combined influences of solar activity and ENSO on the first leaf and bloom dates of lilacs were identified for most of the stations with records spanning ≥ 33 years. In the 11-year band, both increasing solar activity (SSN) and El Niño caused delays in the first leaf and bloom events of the cloned lilac during the 1980s in the northeastern United States. The frequency characteristics and the spatial patterns of the influence of ENSO on the first leaf day and first bloom day were essentially consistent, and such spatial patterns vary with time and periodicity.

  17. Small regulatory RNAs may sharpen spatial expression patterns.

    Directory of Open Access Journals (Sweden)

    Erel Levine

    2007-11-01

    Full Text Available The precise establishment of gene expression patterns is a crucial step in development. Formation of a sharp boundary between high and low spatial expression domains requires a genetic mechanism that exhibits sensitivity, yet is robust to fluctuations, a demand that may not be easily achieved by morphogens alone. Recently, it has been demonstrated that small RNAs (and, in particular, microRNAs play many roles in embryonic development. Whereas some RNAs are essential for embryogenesis, others are limited to fine-tuning a predetermined gene expression pattern. Here, we explore the possibility that small RNAs participate in sharpening a gene expression profile that was crudely established by a morphogen. To this end, we study a model in which small RNAs interact with a target gene and diffusively move from cell to cell. Though diffusion generally smoothens spatial expression patterns, we find that intercellular mobility of small RNAs is actually critical in sharpening the interface between target expression domains in a robust manner. This sharpening occurs as small RNAs diffuse into regions of low mRNA expression and eliminate target molecules therein, but cannot affect regions of high mRNA levels. We discuss the applicability of our results, as examples, to the case of leaf polarity establishment in maize and Hox patterning in the early Drosophila embryo. Our findings point out the functional significance of some mechanistic properties, such as mobility of small RNAs and the irreversibility of their interactions. These properties are yet to be established directly for most classes of small RNAs. An indirect yet simple experimental test of the proposed mechanism is suggested in some detail.

  18. Tree invasion of a montane meadow complex: temporal trends, spatial patterns, and biotic interactions

    Science.gov (United States)

    Charles B. Halpern; Joseph A. Antos; Janine M. Rice; Ryan D. Haugo; Nicole L. Lang

    2010-01-01

    We combined spatial point pattern analysis, population age structures, and a time-series of stem maps to quantify spatial and temporal patterns of conifer invasion over a 200-yr period in three plots totaling 4 ha. In combination, spatial and temporal patterns of establishment suggest an invasion process shaped by biotic interactions, with facilitation promoting...

  19. Multitemporal spatial pattern analysis of Tulum's tropical coastal landscape

    Science.gov (United States)

    Ramírez-Forero, Sandra Carolina; López-Caloca, Alejandra; Silván-Cárdenas, José Luis

    2011-11-01

    The tropical coastal landscape of Tulum in Quintana Roo, Mexico has a high ecological, economical, social and cultural value, it provides environmental and tourism services at global, national, regional and local levels. The landscape of the area is heterogeneous and presents random fragmentation patterns. In recent years, tourist services of the region has been increased promoting an accelerate expansion of hotels, transportation and recreation infrastructure altering the complex landscape. It is important to understand the environmental dynamics through temporal changes on the spatial patterns and to propose a better management of this ecological area to the authorities. This paper addresses a multi-temporal analysis of land cover changes from 1993 to 2000 in Tulum using Thematic Mapper data acquired by Landsat-5. Two independent methodologies were applied for the analysis of changes in the landscape and for the definition of fragmentation patterns. First, an Iteratively Multivariate Alteration Detection (IR-MAD) algorithm was used to detect and localize land cover change/no-change areas. Second, the post-classification change detection evaluated using the Support Vector Machine (SVM) algorithm. Landscape metrics were calculated from the results of IR-MAD and SVM. The analysis of the metrics indicated, among other things, a higher fragmentation pattern along roadways.

  20. Filter bank common spatial patterns in mental workload estimation.

    Science.gov (United States)

    Arvaneh, Mahnaz; Umilta, Alberto; Robertson, Ian H

    2015-01-01

    EEG-based workload estimation technology provides a real time means of assessing mental workload. Such technology can effectively enhance the performance of the human-machine interaction and the learning process. When designing workload estimation algorithms, a crucial signal processing component is the feature extraction step. Despite several studies on this field, the spatial properties of the EEG signals were mostly neglected. Since EEG inherently has a poor spacial resolution, features extracted individually from each EEG channel may not be sufficiently efficient. This problem becomes more pronounced when we use low-cost but convenient EEG sensors with limited stability which is the case in practical scenarios. To address this issue, in this paper, we introduce a filter bank common spatial patterns algorithm combined with a feature selection method to extract spatio-spectral features discriminating different mental workload levels. To evaluate the proposed algorithm, we carry out a comparative analysis between two representative types of working memory tasks using data recorded from an Emotiv EPOC headset which is a mobile low-cost EEG recording device. The experimental results showed that the proposed spatial filtering algorithm outperformed the state-of-the algorithms in terms of the classification accuracy.

  1. Exploring the Ecological Coherence between the Spatial and Temporal Patterns of Bacterioplankton in Boreal Lakes

    Directory of Open Access Journals (Sweden)

    Juan Pablo Niño-García

    2017-04-01

    Full Text Available One of the major contemporary challenges in microbial ecology has been to discriminate the reactive core from the random, unreactive components of bacterial communities. In previous work we used the spatial abundance distributions of bacterioplankton across boreal lakes of Québec to group taxa into four distinct categories that reflect either hydrology-mediated dispersal along the aquatic network or environmental selection mechanisms within lakes. Here, we test whether this categorization derived from the spatial distribution of taxa is maintained over time, by analyzing the temporal dynamics of the operational taxonomic units (OTUs within those spatially derived categories along an annual cycle in the oligotrophic lake Croche (Québec, Canada, and assessing the coherence in the patterns of abundance, occurrence, and environmental range of these OTUs over space and time. We report that the temporal dynamics of most taxa within a single lake are largely coherent with those derived from their spatial distribution over large spatial scales, suggesting that these properties must be intrinsic of particular taxa. We also identified a set of rare taxa cataloged as having a random occupancy based on their spatial distribution, but which showed clear seasonality and abundance peaks along the year, yet these comprised a very small fraction of the total rare OTUs. We conclude that the presence of most rare bacterioplankton taxa in boreal lakes is random, since both their temporal and spatial dynamics suggest links to passive downstream transport and persistence in freshwater networks, rather than environmental selection.

  2. Exploring the Ecological Coherence between the Spatial and Temporal Patterns of Bacterioplankton in Boreal Lakes.

    Science.gov (United States)

    Niño-García, Juan Pablo; Ruiz-González, Clara; Del Giorgio, Paul A

    2017-01-01

    One of the major contemporary challenges in microbial ecology has been to discriminate the reactive core from the random, unreactive components of bacterial communities. In previous work we used the spatial abundance distributions of bacterioplankton across boreal lakes of Québec to group taxa into four distinct categories that reflect either hydrology-mediated dispersal along the aquatic network or environmental selection mechanisms within lakes. Here, we test whether this categorization derived from the spatial distribution of taxa is maintained over time, by analyzing the temporal dynamics of the operational taxonomic units (OTUs) within those spatially derived categories along an annual cycle in the oligotrophic lake Croche (Québec, Canada), and assessing the coherence in the patterns of abundance, occurrence, and environmental range of these OTUs over space and time. We report that the temporal dynamics of most taxa within a single lake are largely coherent with those derived from their spatial distribution over large spatial scales, suggesting that these properties must be intrinsic of particular taxa. We also identified a set of rare taxa cataloged as having a random occupancy based on their spatial distribution, but which showed clear seasonality and abundance peaks along the year, yet these comprised a very small fraction of the total rare OTUs. We conclude that the presence of most rare bacterioplankton taxa in boreal lakes is random, since both their temporal and spatial dynamics suggest links to passive downstream transport and persistence in freshwater networks, rather than environmental selection.

  3. Using Unmanned Aerial Vehicles (UAV to Quantify Spatial Gap Patterns in Forests

    Directory of Open Access Journals (Sweden)

    Stephan Getzin

    2014-07-01

    Full Text Available Gap distributions in forests reflect the spatial impact of man-made tree harvesting or naturally-induced patterns of tree death being caused by windthrow, inter-tree competition, disease or senescence. Gap sizes can vary from large (>100 m2 to small (<10 m2, and they may have contrasting spatial patterns, such as being aggregated or regularly distributed. However, very small gaps cannot easily be recorded with conventional aerial or satellite images, which calls for new and cost-effective methodologies of forest monitoring. Here, we used an unmanned aerial vehicle (UAV and very high-resolution images to record the gaps in 10 temperate managed and unmanaged forests in two regions of Germany. All gaps were extracted for 1-ha study plots and subsequently analyzed with spatially-explicit statistics, such as the conventional pair correlation function (PCF, the polygon-based PCF and the mark correlation function. Gap-size frequency was dominated by small gaps of an area <5 m2, which were particularly frequent in unmanaged forests. We found that gap distances showed a variety of patterns. However, the polygon-based PCF was a better descriptor of patterns than the conventional PCF, because it showed randomness or aggregation for cases when the conventional PCF showed small-scale regularity; albeit, the latter was only a mathematical artifact. The mark correlation function revealed that gap areas were in half of the cases negatively correlated and in the other half independent. Negative size correlations may likely be the result of single-tree harvesting or of repeated gap formation, which both lead to nearby small gaps. Here, we emphasize the usefulness of UAV to record forest gaps of a very small size. These small gaps may originate from repeated gap-creating disturbances, and their spatial patterns should be monitored with spatially-explicit statistics at recurring intervals in order to further insights into forest dynamics.

  4. How spatial heterogeneity of cover affects patterns of shrub encroachment into mesic grasslands.

    Directory of Open Access Journals (Sweden)

    Francesc Montané

    Full Text Available We used a multi-method approach to analyze the spatial patterns of shrubs and cover types (plant species, litter or bare soil in grassland-shrubland ecotones. This approach allows us to assess how fine-scale spatial heterogeneity of cover types affects the patterns of Cytisus balansae shrub encroachment into mesic mountain grasslands (Catalan Pyrenees, Spain. Spatial patterns and the spatial associations between juvenile shrubs and different cover types were assessed in mesic grasslands dominated by species with different palatabilities (palatable grass Festuca nigrescens and unpalatable grass Festuca eskia. A new index, called RISES ("Relative Index of Shrub Encroachment Susceptibility", was proposed to calculate the chances of shrub encroachment into a given grassland, combining the magnitude of the spatial associations and the surface area for each cover type. Overall, juveniles showed positive associations with palatable F. nigrescens and negative associations with unpalatable F. eskia, although these associations shifted with shrub development stage. In F. eskia grasslands, bare soil showed a low scale of pattern and positive associations with juveniles. Although the highest RISES values were found in F. nigrescens plots, the number of juvenile Cytisus was similar in both types of grasslands. However, F. nigrescens grasslands showed the greatest number of juveniles in early development stage (i.e. height30 cm. We concluded that in F. eskia grasslands, where establishment may be constrained by the dominant cover type, the low scale of pattern on bare soil may result in higher chances of shrub establishment and survival. In contrast, although grasslands dominated by the palatable F. nigrescens may be more susceptible to shrub establishment; current grazing rates may reduce juvenile survival.

  5. Spatially Analyzing the Inequity of the Hong Kong Urban Heat Island by Socio-Demographic Characteristics.

    Science.gov (United States)

    Wong, Man Sing; Peng, Fen; Zou, Bin; Shi, Wen Zhong; Wilson, Gaines J

    2016-03-12

    Recent studies have suggested that some disadvantaged socio-demographic groups face serious environmental-related inequities in Hong Kong due to the rising ambient urban temperatures. Identifying heat-vulnerable groups and locating areas of Surface Urban Heat Island (SUHI) inequities is thus important for prioritizing interventions to mitigate death/illness rates from heat. This study addresses this problem by integrating methods of remote sensing retrieval, logistic regression modelling, and spatial autocorrelation. In this process, the SUHI effect was first estimated from the Land Surface Temperature (LST) derived from a Landsat image. With the scale assimilated to the SUHI and socio-demographic data, a logistic regression model was consequently adopted to ascertain their relationships based on Hong Kong Tertiary Planning Units (TPUs). Lastly, inequity "hotspots" were derived using spatial autocorrelation methods. Results show that disadvantaged socio-demographic groups were significantly more prone to be exposed to an intense SUHI effect: over half of 287 TPUs characterized by age groups of 60+ years, secondary and matriculation education attainment, widowed, divorced and separated, low and middle incomes, and certain occupation groups of workers, have significant Odds Ratios (ORs) larger than 1.2. It can be concluded that a clustering analysis stratified by age, income, educational attainment, marital status, and occupation is an effective way to detect the inequity hotspots of SUHI exposure. Additionally, inequities explored using income, marital status and occupation factors were more significant than the age and educational attainment in these areas. The derived maps and model can be further analyzed in urban/city planning, in order to mitigate the physical and social causes of the SUHI effect.

  6. Spatially Analyzing the Inequity of the Hong Kong Urban Heat Island by Socio-Demographic Characteristics

    Directory of Open Access Journals (Sweden)

    Man Sing Wong

    2016-03-01

    Full Text Available Recent studies have suggested that some disadvantaged socio-demographic groups face serious environmental-related inequities in Hong Kong due to the rising ambient urban temperatures. Identifying heat-vulnerable groups and locating areas of Surface Urban Heat Island (SUHI inequities is thus important for prioritizing interventions to mitigate death/illness rates from heat. This study addresses this problem by integrating methods of remote sensing retrieval, logistic regression modelling, and spatial autocorrelation. In this process, the SUHI effect was first estimated from the Land Surface Temperature (LST derived from a Landsat image. With the scale assimilated to the SUHI and socio-demographic data, a logistic regression model was consequently adopted to ascertain their relationships based on Hong Kong Tertiary Planning Units (TPUs. Lastly, inequity “hotspots” were derived using spatial autocorrelation methods. Results show that disadvantaged socio-demographic groups were significantly more prone to be exposed to an intense SUHI effect: over half of 287 TPUs characterized by age groups of 60+ years, secondary and matriculation education attainment, widowed, divorced and separated, low and middle incomes, and certain occupation groups of workers, have significant Odds Ratios (ORs larger than 1.2. It can be concluded that a clustering analysis stratified by age, income, educational attainment, marital status, and occupation is an effective way to detect the inequity hotspots of SUHI exposure. Additionally, inequities explored using income, marital status and occupation factors were more significant than the age and educational attainment in these areas. The derived maps and model can be further analyzed in urban/city planning, in order to mitigate the physical and social causes of the SUHI effect.

  7. Hydrogeological controls on spatial patterns of groundwater discharge in peatlands

    Directory of Open Access Journals (Sweden)

    D. K. Hare

    2017-11-01

    Full Text Available Peatland environments provide important ecosystem services including water and carbon storage, nutrient processing and retention, and wildlife habitat. However, these systems and the services they provide have been degraded through historical anthropogenic agricultural conversion and dewatering practices. Effective wetland restoration requires incorporating site hydrology and understanding groundwater discharge spatial patterns. Groundwater discharge maintains wetland ecosystems by providing relatively stable hydrologic conditions, nutrient inputs, and thermal buffering important for ecological structure and function; however, a comprehensive site-specific evaluation is rarely feasible for such resource-constrained projects. An improved process-based understanding of groundwater discharge in peatlands may help guide ecological restoration design without the need for invasive methodologies and detailed site-specific investigation. Here we examine a kettle-hole peatland in southeast Massachusetts historically modified for commercial cranberry farming. During the time of our investigation, a large process-based ecological restoration project was in the assessment and design phases. To gain insight into the drivers of site hydrology, we evaluated the spatial patterning of groundwater discharge and the subsurface structure of the peatland complex using heat-tracing methods and ground-penetrating radar. Our results illustrate that two groundwater discharge processes contribute to the peatland hydrologic system: diffuse lower-flux marginal matrix seepage and discrete higher-flux preferential-flow-path seepage. Both types of groundwater discharge develop through interactions with subsurface peatland basin structure, often where the basin slope is at a high angle to the regional groundwater gradient. These field observations indicate strong correlation between subsurface structures and surficial groundwater discharge. Understanding these general patterns

  8. Hydrogeological controls on spatial patterns of groundwater discharge in peatlands

    Science.gov (United States)

    Hare, Danielle K.; Boutt, David F.; Clement, William P.; Hatch, Christine E.; Davenport, Glorianna; Hackman, Alex

    2017-11-01

    Peatland environments provide important ecosystem services including water and carbon storage, nutrient processing and retention, and wildlife habitat. However, these systems and the services they provide have been degraded through historical anthropogenic agricultural conversion and dewatering practices. Effective wetland restoration requires incorporating site hydrology and understanding groundwater discharge spatial patterns. Groundwater discharge maintains wetland ecosystems by providing relatively stable hydrologic conditions, nutrient inputs, and thermal buffering important for ecological structure and function; however, a comprehensive site-specific evaluation is rarely feasible for such resource-constrained projects. An improved process-based understanding of groundwater discharge in peatlands may help guide ecological restoration design without the need for invasive methodologies and detailed site-specific investigation. Here we examine a kettle-hole peatland in southeast Massachusetts historically modified for commercial cranberry farming. During the time of our investigation, a large process-based ecological restoration project was in the assessment and design phases. To gain insight into the drivers of site hydrology, we evaluated the spatial patterning of groundwater discharge and the subsurface structure of the peatland complex using heat-tracing methods and ground-penetrating radar. Our results illustrate that two groundwater discharge processes contribute to the peatland hydrologic system: diffuse lower-flux marginal matrix seepage and discrete higher-flux preferential-flow-path seepage. Both types of groundwater discharge develop through interactions with subsurface peatland basin structure, often where the basin slope is at a high angle to the regional groundwater gradient. These field observations indicate strong correlation between subsurface structures and surficial groundwater discharge. Understanding these general patterns may allow resource

  9. Neighborhood Landscape Spatial Patterns and Land Surface Temperature: An Empirical Study on Single-Family Residential Areas in Austin, Texas

    Science.gov (United States)

    Kim, Jun-Hyun; Gu, Donghwan; Sohn, Wonmin; Kil, Sung-Ho; Kim, Hwanyong; Lee, Dong-Kun

    2016-01-01

    Rapid urbanization has accelerated land use and land cover changes, and generated the urban heat island effect (UHI). Previous studies have reported positive effects of neighborhood landscapes on mitigating urban surface temperatures. However, the influence of neighborhood landscape spatial patterns on enhancing cooling effects has not yet been fully investigated. The main objective of this study was to assess the relationships between neighborhood landscape spatial patterns and land surface temperatures (LST) by using multi-regression models considering spatial autocorrelation issues. To measure the influence of neighborhood landscape spatial patterns on LST, this study analyzed neighborhood environments of 15,862 single-family houses in Austin, Texas, USA. Using aerial photos, geographic information systems (GIS), and remote sensing, FRAGSTATS was employed to calculate values of several landscape indices used to measure neighborhood landscape spatial patterns. After controlling for the spatial autocorrelation effect, results showed that larger and better-connected landscape spatial patterns were positively correlated with lower LST values in neighborhoods, while more fragmented and isolated neighborhood landscape patterns were negatively related to the reduction of LST. PMID:27598186

  10. Neighborhood Landscape Spatial Patterns and Land Surface Temperature: An Empirical Study on Single-Family Residential Areas in Austin, Texas

    Directory of Open Access Journals (Sweden)

    Jun-Hyun Kim

    2016-09-01

    Full Text Available Rapid urbanization has accelerated land use and land cover changes, and generated the urban heat island effect (UHI. Previous studies have reported positive effects of neighborhood landscapes on mitigating urban surface temperatures. However, the influence of neighborhood landscape spatial patterns on enhancing cooling effects has not yet been fully investigated. The main objective of this study was to assess the relationships between neighborhood landscape spatial patterns and land surface temperatures (LST by using multi-regression models considering spatial autocorrelation issues. To measure the influence of neighborhood landscape spatial patterns on LST, this study analyzed neighborhood environments of 15,862 single-family houses in Austin, Texas, USA. Using aerial photos, geographic information systems (GIS, and remote sensing, FRAGSTATS was employed to calculate values of several landscape indices used to measure neighborhood landscape spatial patterns. After controlling for the spatial autocorrelation effect, results showed that larger and better-connected landscape spatial patterns were positively correlated with lower LST values in neighborhoods, while more fragmented and isolated neighborhood landscape patterns were negatively related to the reduction of LST.

  11. Neighborhood Landscape Spatial Patterns and Land Surface Temperature: An Empirical Study on Single-Family Residential Areas in Austin, Texas.

    Science.gov (United States)

    Kim, Jun-Hyun; Gu, Donghwan; Sohn, Wonmin; Kil, Sung-Ho; Kim, Hwanyong; Lee, Dong-Kun

    2016-09-02

    Rapid urbanization has accelerated land use and land cover changes, and generated the urban heat island effect (UHI). Previous studies have reported positive effects of neighborhood landscapes on mitigating urban surface temperatures. However, the influence of neighborhood landscape spatial patterns on enhancing cooling effects has not yet been fully investigated. The main objective of this study was to assess the relationships between neighborhood landscape spatial patterns and land surface temperatures (LST) by using multi-regression models considering spatial autocorrelation issues. To measure the influence of neighborhood landscape spatial patterns on LST, this study analyzed neighborhood environments of 15,862 single-family houses in Austin, Texas, USA. Using aerial photos, geographic information systems (GIS), and remote sensing, FRAGSTATS was employed to calculate values of several landscape indices used to measure neighborhood landscape spatial patterns. After controlling for the spatial autocorrelation effect, results showed that larger and better-connected landscape spatial patterns were positively correlated with lower LST values in neighborhoods, while more fragmented and isolated neighborhood landscape patterns were negatively related to the reduction of LST.

  12. Attention modulates visual-tactile interaction in spatial pattern matching.

    Directory of Open Access Journals (Sweden)

    Florian Göschl

    Full Text Available Factors influencing crossmodal interactions are manifold and operate in a stimulus-driven, bottom-up fashion, as well as via top-down control. Here, we evaluate the interplay of stimulus congruence and attention in a visual-tactile task. To this end, we used a matching paradigm requiring the identification of spatial patterns that were concurrently presented visually on a computer screen and haptically to the fingertips by means of a Braille stimulator. Stimulation in our paradigm was always bimodal with only the allocation of attention being manipulated between conditions. In separate blocks of the experiment, participants were instructed to (a focus on a single modality to detect a specific target pattern, (b pay attention to both modalities to detect a specific target pattern, or (c to explicitly evaluate if the patterns in both modalities were congruent or not. For visual as well as tactile targets, congruent stimulus pairs led to quicker and more accurate detection compared to incongruent stimulation. This congruence facilitation effect was more prominent under divided attention. Incongruent stimulation led to behavioral decrements under divided attention as compared to selectively attending a single sensory channel. Additionally, when participants were asked to evaluate congruence explicitly, congruent stimulation was associated with better performance than incongruent stimulation. Our results extend previous findings from audiovisual studies, showing that stimulus congruence also resulted in behavioral improvements in visuotactile pattern matching. The interplay of stimulus processing and attentional control seems to be organized in a highly flexible fashion, with the integration of signals depending on both bottom-up and top-down factors, rather than occurring in an 'all-or-nothing' manner.

  13. Advanced Degrees of Debt: Analyzing the Patterns and Determinants of Graduate Student Borrowing

    Science.gov (United States)

    Belasco, Andrew S.; Trivette, Michael J.; Webber, Karen L.

    2014-01-01

    Despite record student debt and the growing importance of graduate education, little is known about what drives graduate student borrowing. In response to that research gap, this study draws on several national data sources to analyze the patterns and predictors of education-related debt among graduate students specifically. Adjusted Wald tests…

  14. Analysis of Spatial Pattern among Grasshopper and Vegetation in Heihe based on GIS

    Science.gov (United States)

    Zhou, Wei; Wang, KeMing; Zhao, Chengzhang; Zhang, Qi-peng

    Geostatistics was used to analyze the grasshopper and dominant plants population spatial pattern and their relationship in the upper reaches of Heihe River under GIS platform. The results showed that the plants and grasshoppers populations have strong spatial correlation in study area. The Semivariogram curve of Chorthippus brunneus huabeiensis, Filchnerella, Aneurolepidium dasystanchys and Artemisia dalailamae is spherical model, Gomphocerus licenti and Stipa krylovii's Semivariogram curve is exponential and Gaussian model respectively, and their spatial autocorrelation scope is 10.8, 11.3, 11.5, 12.4, 23.5 and 59.7 meters respectively. Stipa krylovii and Artemisia dalailamae spatial distribution was patchy, Aneurolepidium dasystanchys showed flaky distribution; Gomphocerus licenti and Chorthippus brunneus huabeiensis mainly located in southeast areas with high coverage of Stipa krylovii and Aneurolepidium dasystanchys. Filchnerella nearly located in North areas with high coverage of Artemisia dalailamae, but were rarely found in south and east areas. The effects of different plants coverage on grasshopper abundance are significantly different. Filchnerella abundance and Artemisia dalailamae coverage showed significantly positive correlation, Chorthippus brunneus huabeiensis and Gomphocerus licenti positively correlated with Aneurolepidium dasystanchys and Stipa krylovii. Grasshopper spatial patterns and occurrence numbers are both influenced by grasshopper biological characteristics and plant community composition, which reflected complex coupled relation between grasshopper and plant.

  15. Integrating Spatial and Attribute Characteristics of Extended Voronoi Diagrams in Spatial Patterning Research: A Case Study of Wuhan City in China

    Directory of Open Access Journals (Sweden)

    Zuohua Miao

    2016-07-01

    Full Text Available Rapid urbanization has caused numerous problems, and the urban spatial structure has been a hot topic in sustainable development management. Urban spatial structure is affected by a series of factors. Thus, the research model should synthetically consider the spatial and non-spatial relationship of every element. Here, we propose an extended Voronoi diagram for exploring the urban land spatial pattern. In essence, we first used a principal component analysis method to construct attribute evaluation indicators and obtained the attribute distance for each indicator. Second, we integrated spatial and attribute distances to extend the comparison distance for Voronoi diagrams, and then, we constructed the Voronoi aggregative homogeneous map of the study area. Finally, we make a spatial autocorrelation analysis by using GeoDA and SPSS software. Results show that: (1 the residential land cover aggregation is not significant, but spatial diffusion is obvious; (2 the commercial land cover aggregation is considerable; and (3 the spatial agglomeration degree of the industrial land cover is increased and mainly located in urban fringes. According to the neo-Marxist theory, we briefly analyzed the driving forces for shaping the urban spatial structure. To summarize, our approach yields important insights into the urban spatial structure characterized by attribute similarity with geospatial proximity, which contributes to a better understanding of the urban growth mechanism. In addition, it explicitly identifies ongoing urban transformations, potentially supporting the planning for sustainable urban land use and protection.

  16. Disturbance History,Spatial Variability, and Patterns of Biodiversity

    Science.gov (United States)

    Bendix, J.; Wiley, J. J.; Commons, M.

    2012-12-01

    The intermediate disturbance hypothesis predicts that species diversity will be maximized in environments experiencing intermediate intensity disturbance, after an intermediate timespan. Because many landscapes comprise mosaics with complex disturbance histories, the theory implies that each patch in those mosaics should have a distinct level of diversity reflecting combined impact of the magnitude of disturbance and the time since it occurred. We modeled the changing patterns of species richness across a landscape experiencing varied scenarios of simulated disturbance. Model outputs show that individual landscape patches have highly variable species richness through time, with the details reflecting the timing, intensity and sequence of their disturbance history. When the results are mapped across the landscape, the resulting temporal and spatial complexity illustrates both the contingent nature of diversity and the danger of generalizing about the impacts of disturbance.

  17. Combining evolutionary game theory and network theory to analyze human cooperation patterns

    International Nuclear Information System (INIS)

    Scatà, Marialisa; Di Stefano, Alessandro; La Corte, Aurelio; Liò, Pietro; Catania, Emanuele; Guardo, Ermanno; Pagano, Salvatore

    2016-01-01

    Highlights: • We investigate the evolutionary dynamics of human cooperation in a social network. • We introduce the concepts of “Critical Mass”, centrality measure and homophily. • The emergence of cooperation is affected by the spatial choice of the “Critical Mass”. • Our findings show that homophily speeds up the convergence towards cooperation. • Centrality and “Critical Mass” spatial choice partially offset the impact of homophily. - Abstract: As natural systems continuously evolve, the human cooperation dilemma represents an increasingly more challenging question. Humans cooperate in natural and social systems, but how it happens and what are the mechanisms which rule the emergence of cooperation, represent an open and fascinating issue. In this work, we investigate the evolution of cooperation through the analysis of the evolutionary dynamics of behaviours within the social network, where nodes can choose to cooperate or defect following the classical social dilemmas represented by Prisoner’s Dilemma and Snowdrift games. To this aim, we introduce a sociological concept and statistical estimator, “Critical Mass”, to detect the minimum initial seed of cooperators able to trigger the diffusion process, and the centrality measure to select within the social network. Selecting different spatial configurations of the Critical Mass nodes, we highlight how the emergence of cooperation can be influenced by this spatial choice of the initial core in the network. Moreover, we target to shed light how the concept of homophily, a social shaping factor for which “birds of a feather flock together”, can affect the evolutionary process. Our findings show that homophily allows speeding up the diffusion process and make quicker the convergence towards human cooperation, while centrality measure and thus the Critical Mass selection, play a key role in the evolution showing how the spatial configurations can create some hidden patterns, partially

  18. Impact of Spatial Pumping Patterns on Groundwater Management

    Science.gov (United States)

    Yin, J.; Tsai, F. T. C.

    2017-12-01

    Challenges exist to manage groundwater resources while maintaining a balance between groundwater quantity and quality because of anthropogenic pumping activities as well as complex subsurface environment. In this study, to address the impact of spatial pumping pattern on groundwater management, a mixed integer nonlinear multi-objective model is formulated by integrating three objectives within a management framework to: (i) maximize total groundwater withdrawal from potential wells; (ii) minimize total electricity cost for well pumps; and (iii) attain groundwater level at selected monitoring locations as close as possible to the target level. Binary variables are used in the groundwater management model to control the operative status of pumping wells. The NSGA-II is linked with MODFLOW to solve the multi-objective problem. The proposed method is applied to a groundwater management problem in the complex Baton Rouge aquifer system, southeastern Louisiana. Results show that (a) non-dominated trade-off solutions under various spatial distributions of active pumping wells can be achieved. Each solution is optimal with regard to its corresponding objectives; (b) operative status, locations and pumping rates of pumping wells are significant to influence the distribution of hydraulic head, which in turn influence the optimization results; (c) A wide range of optimal solutions is obtained such that decision makers can select the most appropriate solution through negotiation with different stakeholders. This technique is beneficial to finding out the optimal extent to which three objectives including water supply concern, energy concern and subsidence concern can be balanced.

  19. Spatial patterns of drought persistence in East China

    Science.gov (United States)

    Meng, L.; Ford, T.

    2017-12-01

    East China has experienced a number of severe droughts in recent decades. Understanding the characteristics of droughts and their persistence will provide operational guidelines for water resource management and agricultural production. This study uses a logistic regression model to measure the probability of drought occurrence in the current season given the previous season's Standardized Precipitation Index (SPI) and Southern Oscillation Index (SOI) as well as drought persistence. Results reveal large spatial and seasonal variations in the relationship between the previous season's SPI and the drought occurrence probability in a given season. The drought persistence averaged over the entire study area for all the four seasons is approximately 34% with large variations from season to season and from region to region. The East and Northeast regions have the largest summer drought persistence ( 40%) and lowest fall drought persistence ( 28%). The spatial pattern in winter and spring drought persistence is dissimilar with stronger winter and weaker spring drought persistence in the Southwest and Northeast relative to other regions. Logistic regression analysis indicates a stronger negative relationship in summer-to-fall (or between fall drought occurrence and summer SPI) than other inter-season relationships. This study demonstrates that the impact of previous season SPI and SOI on current season drought varies substantially from region to region and from season to season. This study also shows stronger drought persistence in summer than in other seasons. In other words, the probability of fall drought occurrence is closely related to summer moisture conditions in the East China.

  20. How can mental maps, applied to the coast environment, help in collecting and analyzing spatial representations?

    Directory of Open Access Journals (Sweden)

    Servane Gueben-Venière

    2011-09-01

    Full Text Available Après avoir été principalement utilisées en géographie urbaine, puis quelque peu mises de côté par les géographes, les cartes mentales font désormais l’objet d’un regain d’intérêt, en particulier dans le champ de la géographie de l’environnement. Appliquées à l’espace littoral et employées en complément de l’entretien, elles se révèlent être non seulement un bon outil de recueil des représentations spatiales, mais aussi une aide précieuse pour leur analyse. Cet article s’appuie sur l’exemple de l’utilisation des cartes mentales dans le poster scientifique Des ingénieurs de plus en plus « verts ». Évolution du regard des ingénieurs en charge de la gestion du littoral néerlandais, lauréat du concours organisé par le forum de l’École Doctorale de Géographie de Paris de 2011.After having been mainly used in urban geography, then cast aside by the geographers, mental maps are now the object of renewed interest, particularly in the field of environmental geography. Applied to the coast, and used as a supplement to the interview, these maps are not only of great assistance in collecting spatial representations, but also helpful in analyzing them. This article uses the example of the integration of mental maps in the scientific poster “Des ingénieurs de plus en plus “verts”. Évolution du regard des ingénieurs en charge de la gestion du littoral néerlandais”(Engineers are ‘greener and greener’. Evolution of the thinking of engineers in charge of Dutch coastal management., prize-winner of the competition organized by the Paris Doctoral School of Geography Forum in 2011.

  1. Spatial Patterns of NLCD Land Cover Change Thematic Accuracy (2001 - 2011)

    Science.gov (United States)

    Research on spatial non-stationarity of land cover classification accuracy has been ongoing for over two decades. We extend the understanding of thematic map accuracy spatial patterns by: 1) quantifying spatial patterns of map-reference agreement for class-specific land cover c...

  2. VPA: an R tool for analyzing sequencing variants with user-specified frequency pattern

    Directory of Open Access Journals (Sweden)

    Hu Qiang

    2012-01-01

    Full Text Available Abstract Background The massive amounts of genetic variant generated by the next generation sequencing systems demand the development of effective computational tools for variant prioritization. Findings VPA (Variant Pattern Analyzer is an R tool for prioritizing variants with specified frequency pattern from multiple study subjects in next-generation sequencing study. The tool starts from individual files of variant and sequence calls and extract variants with user-specified frequency pattern across the study subjects of interest. Several position level quality criteria can be incorporated into the variant extraction. It can be used in studies with matched pair design as well as studies with multiple groups of subjects. Conclusions VPA can be used as an automatic pipeline to prioritize variants for further functional exploration and hypothesis generation. The package is implemented in the R language and is freely available from http://vpa.r-forge.r-project.org.

  3. Spatial and temporal patterns of global onshore wind speed distribution

    International Nuclear Information System (INIS)

    Zhou, Yuyu; Smith, Steven J

    2013-01-01

    Wind power, a renewable energy source, can play an important role in electrical energy generation. Information regarding wind energy potential is important both for energy related modeling and for decision-making in the policy community. While wind speed datasets with high spatial and temporal resolution are often ultimately used for detailed planning, simpler assumptions are often used in analysis work. An accurate representation of the wind speed frequency distribution is needed in order to properly characterize wind energy potential. Using a power density method, this study estimated global variation in wind parameters as fitted to a Weibull density function using NCEP/climate forecast system reanalysis (CFSR) data over land areas. The Weibull distribution performs well in fitting the time series wind speed data at most locations according to R 2 , root mean square error, and power density error. The wind speed frequency distribution, as represented by the Weibull k parameter, exhibits a large amount of spatial variation, a regionally varying amount of seasonal variation, and relatively low decadal variation. We also analyzed the potential error in wind power estimation when a commonly assumed Rayleigh distribution (Weibull k = 2) is used. We find that the assumption of the same Weibull parameter across large regions can result in non-negligible errors. While large-scale wind speed data are often presented in the form of mean wind speeds, these results highlight the need to also provide information on the wind speed frequency distribution. (letter)

  4. Spatial Pattern and Regional Relevance Analysis of the Maritime Silk Road Shipping Network

    Directory of Open Access Journals (Sweden)

    Naixia Mou

    2018-03-01

    Full Text Available Under the strategy of “One Belt and One Road”, this paper explores the spatial pattern and the status quo of regional trade relevance of the Maritime Silk Road shipping network. Based on complex network theory, a topological structure map of shipping networks for containers, tankers, and bulk carriers was constructed, and the spatial characteristics of shipping networks were analyzed. Using the mode of spatial arrangement and the Herfindahl–Hirschman Index, this paper further analyzes the traffic flow pattern of regional trade of three kinds of goods. It is shown that the shipping network of containers, tankers and bulk carriers are unevenly distributed and have regional agglomeration phenomena. There is a strong correlation between the interior of the region and the adjacent areas, and the port competition is fierce. Among them, the container ships network is the most competitive in the region, while the competitiveness of the tankers network is relatively the lowest. The inter-regional correlation is weak, and a few transit hub ports have obvious competitive advantages. The ports in Northeast Asia and Southeast Asia are the most significant. The research results combined with the Maritime Silk Road policy can provide reference for port construction, route optimization, and coordinated development of regional trade, which will help to save time and cost of marine transportation, reduce energy consumption, and promote the sustainable development of marine environment and regional trade on the Maritime Silk Road.

  5. [Analysis on instantaneous spatial pattern of thermal force field in Harbin].

    Science.gov (United States)

    Zhu, Ning; Wang, Cheng; Zhou, Hongze; Li, Min

    2003-11-01

    The spatial pattern of urban thermal force field is not only the dominant content in assessing city ecological environment, but also an important base for city green system planning. The status of spatial pattern of thermal force field in Harbin was analyzed with RS and GIS techniques. Based on the instantaneous radiation temperature of the land surfaces in the city when the TM image was sensed remotely, all the patches were divided into 3 levels, i.e., low radiation temperature ( 28 degrees C) were uneven in their areas. The biggest area in these patches was 1489 hm2, and the smallest one was 0.72 hm2. The proportion of the patches with an area less than 1 hm2, between 1-5 hm2, and more than 5 hm2 was 95.02%, 3.46%, and 1.58%, respectively. There were 3 types of spatial patterns of the super-thermal radiation patches, i.e., round form (the average radiation temperature was 30.8 degrees C), ring form (the average radiation temperature was 27 degrees C), and pieces form (the average radiation temperature was 24.7 degrees C). Daowai District and Daoli District were round form, districts along the ring routes of railway in the city were ring form, and Nangang District and Dongli District were pieces form. Some advices to resolve the problem of 'heat island effect' influenced by the factors including greenland covering rate, greenland area and building dimension were discussed.

  6. Spatial pattern of soil and soybean crop: an assessment using digital mapping techniques

    Science.gov (United States)

    Castro Franco, Mauricio; Cordoba, Mariano; Costa, Jose Luis; Aparicio, Virginia; Domenech, Marisa

    2017-04-01

    The aim of this study was to analyze the relationships among spatial patterns of soil properties and soybean crop. The study was carried out in three provinces of Argentina: (i) Buenos Aires (BA), (ii) Entre Rios (ER) and (iii) Cordoba (COR). In each province, 2 agricultural fields were selected. Ancillary information related to soil forming factors in each field was gathered, for example apparent electrical conductivity (ECa), NDVI and yield maps. We used principal component spatial analysis (MULTISPATI-PCA) to delimit zones for soil type by field. To zonal validation, 4 sampling sites were located in which we collected soil samples, grain yield and soybean crop quality. Random Forest (RF) was used to determine the importance of soil properties over soybean crop properties. For comparing soil properties in each zone between fields, a mix lineal model and ANOVA were adjusted. Our results suggest that MULTISPATI-PCA was efficient to delimit zones for soil type. Relationships between soil properties and crop yield were examined and understood. However, it did not occur with crop quality patterns. Topography did not prove to be an accurate indicator of spatial pattern relations of soil properties and crop, whereas ECa, yield maps and NDVI proved to be effective indicators. Grains m-2 and NDVI were affected homogeneously and were showed spatial correspondence according to soil limitations. Percentage of protein did not show spatial correspondence with delimitated zones in saline soils, particularly in ER. In such fields, Om and pH were important for percentage of protein. It was evidenced that a direct relation exists between complex relationship of soil and crop properties and soil degradation.

  7. Quantifying Forest Spatial Pattern Trends at Multiple Extents: An Approach to Detect Significant Changes at Different Scales

    Directory of Open Access Journals (Sweden)

    Ludovico Frate

    2014-09-01

    Full Text Available We propose a procedure to detect significant changes in forest spatial patterns and relevant scales. Our approach consists of four sequential steps. First, based on a series of multi-temporal forest maps, a set of geographic windows of increasing extents are extracted. Second, for each extent and date, specific stochastic simulations that replicate real-world spatial pattern characteristics are run. Third, by computing pattern metrics on both simulated and real maps, their empirical distributions and confidence intervals are derived. Finally, multi-temporal scalograms are built for each metric. Based on cover maps (1954, 2011 with a resolution of 10 m we analyze forest pattern changes in a central Apennines (Italy reserve at multiple spatial extents (128, 256 and 512 pixels. We identify three types of multi-temporal scalograms, depending on pattern metric behaviors, describing different dynamics of natural reforestation process. The statistical distribution and variability of pattern metrics at multiple extents offers a new and powerful tool to detect forest variations over time. Similar procedures can (i help to identify significant changes in spatial patterns and provide the bases to relate them to landscape processes; (ii minimize the bias when comparing pattern metrics at a single extent and (iii be extended to other landscapes and scales.

  8. Spatial patterns of two co-occurring savanna and forest tree species in a dense fire-protected savanna fragment

    Directory of Open Access Journals (Sweden)

    Rafael Carvalho da Costa

    Full Text Available ABSTRACT Savanna-forest transition under fire-exclusion could be explained by differential competitive performance of savanna and forest species under shading/fire-exclusion. Aiming to understand strategies related to either habitat affinity, we investigated spatial patterns of a savanna and a forest species in a fire-protected savanna. We predicted that: savanna species would have lower abundance than the forest species due to a restriction in the number of open microsites; segregation of size classes and a trend from clumping to regularity with size for forest species due to absence of microsite limitation and intra-specifc competition; and spatial association and increasing clustering with size for savanna species due to microsite limitation. To test these predictions, we described spatial patterns of plants in two size classes in three plots of 0.5 ha. We analyzed spatial patterns and associations of size classes using SADIE methodology. Different from what we expected, both species were more abundant among the studied plots and exhibited an increasing aggregation from small to large size classes. We also found a positive spatial association between size classes of both. These results suggest that both savanna and forest species produce similar spatial patterns independently of habitat affinity. We discuss the possible processes responsible for the observed patterns.

  9. The Dominance of Spatial Memory over Color or Form in 3- to 5-Year-Olds' Pattern Reconstructions.

    Science.gov (United States)

    Cocking, Rodney R.

    The relative importance of spatial-position as a memory aid in a block pattern reproduction task was investigated by analyzing the object-selection and object-placement strategies of 69 nursery school children. Subjects were given a task modeled on Piaget's assessment of Static Reproductive Images and Action that had been modified into a…

  10. ANALYSIS OF SPATIAL PATTERN AND INFLUENCING FACTORS OF E-COMMERCE

    OpenAIRE

    Y. Zhang; J. Chen; S. Zhang

    2017-01-01

    This paper aims to study the relationship between e-commerce development and geographical characteristics using data of e-commerce, economy, Internet, express delivery and population from 2011 to 2015. Moran’s I model and GWR model are applied to analyze the spatial pattern of E-commerce and its influencing factors. There is a growth trend of e-commerce from west to east, and it is obvious to see that e-commerce development has a space-time clustering, especially around the Yangtze R...

  11. Seeing shapes in seemingly random spatial patterns: Fractal analysis of Rorschach inkblots

    Science.gov (United States)

    Taylor, R. P.; Martin, T. P.; Montgomery, R. D.; Smith, J. H.; Micolich, A. P.; Boydston, C.; Scannell, B. C.; Fairbanks, M. S.; Spehar, B.

    2017-01-01

    Rorschach inkblots have had a striking impact on the worlds of art and science because of the remarkable variety of associations with recognizable and namable objects they induce. Originally adopted as a projective psychological tool to probe mental health, psychologists and artists have more recently interpreted the variety of induced images simply as a signature of the observers’ creativity. Here we analyze the relationship between the spatial scaling parameters of the inkblot patterns and the number of induced associations, and suggest that the perceived images are induced by the fractal characteristics of the blot edges. We discuss how this relationship explains the frequent observation of images in natural scenery. PMID:28196082

  12. Ionospheric total electron content: Spatial patterns of variability

    Science.gov (United States)

    Lean, J. L.; Meier, R. R.; Picone, J. M.; Sassi, F.; Emmert, J. T.; Richards, P. G.

    2016-10-01

    The distinctive spatial patterns of the ionosphere's total electron content (TEC) response to solar, seasonal, diurnal, and geomagnetic influences are determined across the globe using a new statistical model constructed from 2-hourly TEC observations from 1998 to 2015. The model combines representations of the physical solar EUV photon and geomagnetic activity drivers with solar-modulated sinusoidal parameterizations of four seasonal cycles and solar-modulated and seasonally modulated parameterizations of three diurnal cycles. The average absolute residual of the data-model differences is 2.1 total electron content unit, 1 TECU = 1016 el m-2 (TECU) (9%) and the root-mean-square error is 3.5 TECU (15%). Solar and geomagnetic variability, the semiannual oscillation and the diurnal and semidiurnal oscillations all impact TEC most at low magnetic latitudes where TEC itself maximizes, with differing degrees of longitudinal inhomogeneity. In contrast, the annual oscillation manifests primarily in the Southern Hemisphere with maximum amplitude over midlatitude South America, extending to higher southern latitudes in the vicinity of the Weddell Sea. Nighttime TEC levels in the vicinity of the Weddell Sea exceed daytime levels every year in Southern Hemisphere summer as a consequence of the modulation of the diurnal oscillations by the seasonal oscillations. The anomaly, which is present at all phases of the solar cycle, commences sooner and ends later under solar minimum conditions. The model minus data residuals maximize at tropical magnetic latitudes in four geographical regions similar to the ionosphere pattern generated by lower atmospheric meteorology. Enhanced residuals at northern midlatitudes during winter are consistent with an influence of atmospheric gravity waves.

  13. Spatial scale drives patterns in soil bacterial diversity: Spatial scale drives soil diversity

    Energy Technology Data Exchange (ETDEWEB)

    O' Brien, Sarah L. [Biosciences Division, Argonne National Laboratory, 9700 S. Cass Ave. Argonne IL 60439 USA; Gibbons, Sean M. [Biosciences Division, Argonne National Laboratory, 9700 S. Cass Ave. Argonne IL 60439 USA; Graduate Program in Biophysical Sciences, University of Chicago, 929 E. 57th St. Chicago IL 60637 USA; Owens, Sarah M. [Biosciences Division, Argonne National Laboratory, 9700 S. Cass Ave. Argonne IL 60439 USA; Computation Institute, University of Chicago, Chicago IL 60637 USA; Hampton-Marcell, Jarrad [Biosciences Division, Argonne National Laboratory, 9700 S. Cass Ave. Argonne IL 60439 USA; Department of Ecology and Evolution, Department of Surgery, University of Chicago, 1101 E. 57th St. Chicago IL 606037 USA; Johnston, Eric R. [Biosciences Division, Argonne National Laboratory, 9700 S. Cass Ave. Argonne IL 60439 USA; Jastrow, Julie D. [Biosciences Division, Argonne National Laboratory, 9700 S. Cass Ave. Argonne IL 60439 USA; Gilbert, Jack A. [Biosciences Division, Argonne National Laboratory, 9700 S. Cass Ave. Argonne IL 60439 USA; Department of Ecology and Evolution, Department of Surgery, University of Chicago, 1101 E. 57th St. Chicago IL 606037 USA; Marine Biological Laboratory, 7 MBL Street Woods Hole MA 02543 USA; College of Environmental and Resource Sciences, Zhejiang University, Hangzhou 310058 China; Meyer, Folker [Biosciences Division, Argonne National Laboratory, 9700 S. Cass Ave. Argonne IL 60439 USA; Computation Institute, University of Chicago, Chicago IL 60637 USA; Antonopoulos, Dionysios A. [Biosciences Division, Argonne National Laboratory, 9700 S. Cass Ave. Argonne IL 60439 USA

    2016-03-21

    Soil microbial communities are essential for ecosystem function, but linking community composition to biogeochemical processes is challenging because of high microbial diversity and large spatial variability of most soil characteristics. We investigated soil bacterial community structure in a switchgrass stand planted on soil with a history of grassland vegetation at high spatial resolution to determine whether biogeographic trends occurred at the centimeter scale. Moreover, we tested whether such heterogeneity, if present, influenced community structure within or among ecosystems. Pronounced heterogeneity was observed at centimeter scales, with abrupt changes in relative abundance of phyla from sample to sample. At the ecosystem scale (> 10 m), however, bacterial community composition and structure were subtly, but significantly, altered by fertilization, with higher alpha diversity in fertilized plots. Moreover, by comparing these data with data from 1772 soils from the Earth Microbiome Project, it was found that 20% diverse globally sourced soil samples, while grassland soils shared approximately 40% of their operational taxonomic units with the current study. By spanning several orders of magnitude, the analysis suggested that extreme patchiness characterized community structure at smaller scales but that coherent patterns emerged at larger length scales.

  14. Spatial, Temporal and Spatio-Temporal Patterns of Maritime Piracy.

    Science.gov (United States)

    Marchione, Elio; Johnson, Shane D

    2013-11-01

    To examine patterns in the timing and location of incidents of maritime piracy to see whether, like many urban crimes, attacks cluster in space and time. Data for all incidents of maritime piracy worldwide recorded by the National Geospatial Intelligence Agency are analyzed using time-series models and methods originally developed to detect disease contagion. At the macro level, analyses suggest that incidents of pirate attacks are concentrated in five subregions of the earth's oceans and that the time series for these different subregions differ. At the micro level, analyses suggest that for the last 16 years (or more), pirate attacks appear to cluster in space and time suggesting that patterns are not static but are also not random. Much like other types of crime, pirate attacks cluster in space, and following an attack at one location the risk of others at the same location or nearby is temporarily elevated. The identification of such regularities has implications for the understanding of maritime piracy and for predicting the future locations of attacks.

  15. Speckle and fringe dynamics in imagingspeckle-pattern interferometry for spatial-filtering velocimetry

    DEFF Research Database (Denmark)

    Jakobsen, Michael Linde; Iversen, Theis F. Q.; Yura, Harold T.

    2011-01-01

    This paper analyzes the dynamics of laser speckles and fringes, formed in an imaging-speckle-pattern interferometer with the purpose of sensing linear three-dimensional motion and out-of-plane components of rotation in real time, using optical spatial-filtering-velocimetry techniques. The ensemble......-average definition of the cross-correlation function is applied to the intensity distributions, obtained in the observation plane at two positions of the object. The theoretical analysis provides a description for the dynamics of both the speckles and the fringes. The analysis reveals that both the magnitude...... and direction of all three linear displacement components of the object movement can be determined. Simultaneously, out-ofplane rotation of the object including the corresponding directions can be determined from the spatial gradient of the in-plane fringe motion throughout the observation plane. The theory...

  16. Tools to Analyze Morphology and Spatially Mapped Molecular Data | Informatics Technology for Cancer Research (ITCR)

    Science.gov (United States)

    This project is to develop, deploy, and disseminate a suite of open source tools and integrated informatics platform that will facilitate multi-scale, correlative analyses of high resolution whole slide tissue image data, spatially mapped genetics and molecular data for cancer research. This platform will play an essential role in supporting studies of tumor initiation, development, heterogeneity, invasion, and metastasis.

  17. Spatial and temporal patterns of eastern Australia subtropical coral communities.

    Directory of Open Access Journals (Sweden)

    Steven J Dalton

    Full Text Available Despite increases in the frequency and intensity of disturbances on coral reefs over the past few decades, the response of subtropical coral assemblages to climate change is poorly understood. To address this knowledge gap on Australian reefs and provide a baseline for future comparisons, we quantified spatial (10-100's of kilometres and temporal (decadal patterns of benthic assemblages across a latitudinal gradient along the east Australian coastline (23.5° S to 31.5° S. Benthic community composition was quantified at six locations from the southern Great Barrier Reef, Queensland (Heron Reef, 23.5° S, 152° E to northern New South Wales (31° S, 153.1° E and at Lord Howe Island (31.5° S, 159.1° E. Our results indicate significant latitudinal differences in benthic assemblages, while community composition at some sites was more similar to those hundreds of kilometres away than to that of neighbouring reefs. A general trend was observed with decreasing cover of Acroporidae with increasing latitude, corresponding with an increasing cover of Pocilloporidae and Dendrophylliidae. Heron Reef comprised a high proportion of Acropora corals (43% total coral cover and coralline algae (44%. In contrast, high-latitude reefs were dominated by mixed coral assemblages (0-52% and high macroalgal cover (16-27%. Decadal comparisons of high-latitude reefs showed regional stability of benthic assemblages (9 out of 11 assemblages remained stable at > 75% similarity, during a period of warming oceans (0.15-0.24°C per decade. Such temporal stability suggests that eastern Australian subtropical communities may be more resistant than tropical reef communities that have experienced assembly shifts caused by perturbations associated with recent global climate change. Despite the clear differences in the structure of coral assemblages evident in our spatial surveys, we suggest that the temporal stability of high-latitude reefs may provide a limited refuge for

  18. Method for determining the spatial position of the shoulder with ultrasound-based motion analyzer.

    Science.gov (United States)

    Illyés, Arpád; Kiss, Rita M

    2006-02-01

    Several methods have been developed recently for the analysis of the spatial motion of the scapula and the arm, whereby the spatial position of shoulder bones is determined in static conditions by interrupting motion. The authors have developed a 3D motion analysis method recording scapular motion in progress with appropriate accuracy in the course of arm movements of various degrees. The objective of this study is to explore the applicability of the method developed, as well as to compare it with and verify it by other methods developed earlier. The position and displacements of shoulder bones were determined on 30 shoulders of 15 healthy people. The newly developed measurement method is based on the mechanical basic principle stating that the position and motion of a rigid body -- in this case, the bones (segments) forming the shoulder joint -- can be calculated at any moment from the spatial coordinates of three points of a segment and any changes thereof in the course of motion. Ultrasound-based triplets providing the three points (fundamental points) by a segment as required for measurement were fixed on the sternum (modeling the trunk), the clavicle, the acromion (modeling the scapula), the upper arm, and the lower arm. The position of the sixteen anatomical points involved in the study were determined by an ultrasound-based pointer in the local coordinate system specified by the fundamental points before starting measurements. The ZEBRIS ultrasound-based motion analysis system was used for measuring the spatial coordinates of triplets in the course of continuous motion. The spatial coordinates of the designated anatomical points can be calculated by the method of triangulation. The method was calibrated by a ZEBRIS mapping (3DCAD) software commercially available, and the measurement error rate of the method was determined by statistical calculations. On the basis of calibration and error calculations it could be established that the accuracy and the

  19. Spatial coherence resonance and spatial pattern transition induced by the decrease of inhibitory effect in a neuronal network

    Science.gov (United States)

    Tao, Ye; Gu, Huaguang; Ding, Xueli

    2017-10-01

    Spiral waves were observed in the biological experiment on rat brain cortex with the application of carbachol and bicuculline which can block inhibitory coupling from interneurons to pyramidal neurons. To simulate the experimental spiral waves, a two-dimensional neuronal network composed of pyramidal neurons and inhibitory interneurons was built. By decreasing the percentage of active inhibitory interneurons, the random-like spatial patterns change to spiral waves and to random-like spatial patterns or nearly synchronous behaviors. The spiral waves appear at a low percentage of inhibitory interneurons, which matches the experimental condition that inhibitory couplings of the interneurons were blocked. The spiral waves exhibit a higher order or signal-to-noise ratio (SNR) characterized by spatial structure function than both random-like spatial patterns and nearly synchronous behaviors, which shows that changes of the percentage of active inhibitory interneurons can induce spatial coherence resonance-like behaviors. In addition, the relationship between the coherence degree and the spatial structures of the spiral waves is identified. The results not only present a possible and reasonable interpretation to the spiral waves observed in the biological experiment on the brain cortex with disinhibition, but also reveal that the spiral waves exhibit more ordered degree in spatial patterns.

  20. Study of Spatial Pattern of Indicator Plant Species in Ecological Species Groups (Case Study: Manesht Protected Area, Ilam Province

    Directory of Open Access Journals (Sweden)

    M. Heydari

    2016-12-01

    Full Text Available The key factor in understanding the forest ecosystems is forest structure. Spatial arrangement and location of trees are both one of the main components of forest stand structure. This study was carried out in Manesht protected area, Ilam province. In order to determine the ecological groups and spatial patterns of indicator species, we used fixed-area plots method. For data collection, 125 square sampling plots with an area of 400 m2 were selected based on a systematically random method. The plants were classified using TWINSPAN analysis and then spatial pattern was analyzed by indices of ratio of average to variance, Morisata and standardized Morisata. Four ecological groups were specified and all dispersion indices showed clumped pattern for indicator species of the ecological groups. The results of this study could provide useful information to describe the sustainability of this valuable ecosystem and monitoring protective and rehabilitative practices.

  1. Similarities in the Spatial Pattern of the Surface Flux Response to Present-Day Greenhouse Gases and Aerosols

    Science.gov (United States)

    Persad, G.; Ming, Y.; Ramaswamy, V.

    2014-12-01

    Recent studies suggest that present-day greenhouse gases (GHGs) and aerosols can produce remarkably similar patterns of climate response in fully coupled general circulation model (GCM) simulations, despite having significantly different spatial patterns of top-of-atmosphere (TOA) forcing. However, there is little understanding of the mechanisms of ocean-atmosphere interaction that could lead to the response pattern formation. Surface flux perturbations are a crucial pathway by which TOA forcing is communicated to the ocean, and may be a vital link in explaining the spatial similarities in the fully coupled responses to disparate TOA forcing patterns—a phenomenon with implications for detection and attribution, as well as the climate sensitivity to different forcers. We analyze the surface energy budget response to present-day aerosols versus GHGs in single forcing, fixed SST, atmospheric GCM experiments to identify mechanisms for response pattern formation via surface flux perturbations. We find that, although the TOA forcing spatial patterns of GHGs and aerosols are largely uncorrelated, their surface radiative and heat flux patterns are significantly anti-correlated. Furthermore, this anti-correlation is largely explained by similar (but sign-reversed) spatial patterns of surface latent and sensible heat flux response to the two forcers, particularly over the winter-hemisphere extratropical oceans. These are, in turn, driven by spatially similar perturbations in surface winds from changes in mean tropical and midlatitude circulation. These results suggest that the mean atmospheric circulation, which has many anti-symmetric responses to GHG and aerosol forcings, is an efficient homogenizer of spatial patterns in the surface heat flux response to heterogeneous TOA forcings, creating an atmosphere-only pathway for similarities in the fully coupled response.

  2. Pattern formation through spatial interactions in a modified Daisyworld model

    Science.gov (United States)

    Alberti, Tommaso; Primavera, Leonardo; Lepreti, Fabio; Vecchio, Antonio; Carbone, Vincenzo

    2015-04-01

    The Daisyworld model is based on a hypothetical planet, like the Earth, which receives the radiant energy coming from a Sun-like star, and populated by two kinds of identical plants differing by their colour: white daisies reflecting light and black daisies absorbing light. The interactions and feedbacks between the collective biota of the planet and the incoming radiation form a self-regulating system where the conditions for life are maintained. We investigate a modified version of the Daisyworld model where a spatial dependency on latitude is introduced, and both a variable heat diffusivity along latitude and a simple greenhouse model are included. We show that the spatial interactions between the variables of the system can generate some equilibrium patterns which can locally stabilize the coexistence of the two vegetation types. The feedback on albedo is able to generate new equilibrium solutions which can efficiently self-regulate the planet climate, even for values of the solar luminosity relatively far from the current Earth conditions. The extension to spatial Daisyworld gives room to the possibility of inhomogeneous solar forcing in a curved planet, with explicit differences between poles and equator and the direct use of the heat diffusion equation. As a first approach, to describe a spherical planet, we consider the temperature T(θ,t) and the surface coverage as depending only on time and on latitude θ (-90° ≤ θ ≤ 90°). A second step is the introduction of the greenhouse effect in the model, the process by which outgoing infrared radiation is partly screened by greenhouse gases. This effect can be described by relaxing the black-body radiation hypothesis and by introducing a grayness function g(T) in the heat equation. As a third step, we consider a latitude dependence of the Earth's conductivity, χ = χ(θ). Considering these terms, using spherical coordinates and symmetry with respect to θ, the modified Daisyworld equations reduce to the

  3. Spatial Patterns in Biofilm Diversity across Hierarchical Levels of River-Floodplain Landscapes.

    Directory of Open Access Journals (Sweden)

    Marc Peipoch

    Full Text Available River-floodplain systems are among the most diverse and productive ecosystems, but the effects of biophysical complexity at multiple scales on microbial biodiversity have not been studied. Here, we investigated how the hierarchical organization of river systems (i.e., region, floodplain, zone, habitats, and microhabitats influences epilithic biofilm community assemblage patterns by characterizing microbial communities using 16S rRNA gene sequence data and analyzing bacterial species distribution across local and regional scales. Results indicate that regional and local environmental filters concurrently sort bacterial species, suggesting that spatial configuration of epilithic biofilms resembles patterns of larger organisms in floodplain ecosystems. Along the hierarchical organization of fluvial systems, floodplains constitute a vector of maximum environmental heterogeneity and consequently act as a major landscape filter for biofilm species. Thus, river basins and associated floodplains may simply reflect very large scale 'patches' within which environmental conditions select for community composition of epilithic biofilms.

  4. OpenMSI Arrayed Analysis Toolkit: Analyzing Spatially Defined Samples Using Mass Spectrometry Imaging

    DEFF Research Database (Denmark)

    de Raad, Markus; de Rond, Tristan; Rübel, Oliver

    2017-01-01

    ://openmsinersc.gov), a platform for storing, sharing, and analyzing MSI data. By using a web-based python notebook (Jupyter), OMAAT is accessible to anyone without programming experience yet allows experienced users to leverage all features. OMAAT was :evaluated by analyzing an MSI data set of a high-throughput glycoside...

  5. Basic Characteristics and Spatial Patterns of Pseudo-Settlements--Taking Dalian as An Example.

    Science.gov (United States)

    Gao, Jiaji; Zhang, Yingjia; Li, Xueming

    2016-01-20

    A person's living behavior patterns are closely related to three types of settlements: real-life settlements, imagined settlements, and pseudo-settlements. The term "pseudo-settlement" (PS) refers to the places that are selectively recorded and represented after the mass media chose and restructure the residence information. As the mass media rapidly develops and people's way of obtaining information gradually change, PS has already become one of the main ways for people to recognize and understand real-life settlements, as well as describe their impressions of imagined settlements. PS also has a profound impact on tourism, employment, investment, migration, real estate development, etc. Thus, the study of PSs has important theoretical and practical significance. This paper proposes to put forward residential quarters where the mass media is displayed as the object of study and establishes the pseudo-settlement index system of Dalian in and elaborate analysis of the concept of PSs. From three aspects, including pseudo-buildings, pseudo-districts and pseudo-culture, this paper uses the ArcGIS 10.0 kernel density (spacial analyst) to analyze and interpret the basic characteristics and spatial patterns of 14 elements of the PS in Dalian. Through systemic clustering analysis, it identifies eight major types of PSs in Dalian. Then it systematically elaborates current situations and characteristics of the spatial pattern of PSs in Dalian, namely: regionally concentrated, widely scattered and blank spaces without pseudo-settlements. Finally, this paper discusses the mechanism of formation of PSs in Dalian.

  6. Patterns of coexistence of two species of freshwater turtles are affected by spatial scale

    DEFF Research Database (Denmark)

    Segurado, P.; Kunin, W.E.; Filipe, A.F.

    2012-01-01

    such inferences remains elusive. For example, would inferences of biotic interactions from broad-scale patterns of coexistence provide a surrogate for patterns at finer spatial scales? In this paper we examine how the spatial and environmental association between two closely related species of freshwater turtles...

  7. HIV/AIDS in Oyo State, Nigeria: analysis of spatial pattern of ...

    African Journals Online (AJOL)

    In Nigeria, the current prevalent rate shows that it is higher in River state. A number of factors are responsible for the spatial variability. This study explored the spatial variability or spatial pattern of prevalence in Oyo state, Nigeria. The five zones constitute the component part of Oyo state in the western part of Nigeria.

  8. Spatial patterns of distribution and abundance of Harrisia portoricensis, an endangered Caribbean cactus

    Science.gov (United States)

    J. Rojas-Sandoval; E. J. Melendez-Ackerman; NO-VALUE

    2013-01-01

    Aims The spatial distribution of biotic and abiotic factors may play a dominant role in determining the distribution and abundance of plants in arid and semiarid environments. In this study, we evaluated how spatial patterns of microhabitat variables and the degree of spatial dependence of these variables influence the distribution and abundance of the endangered...

  9. Analyzing the Effects of Spatial Interaction among City Clusters on Urban Growth—Case of Wuhan Urban Agglomeration

    Directory of Open Access Journals (Sweden)

    Ronghui Tan

    2016-08-01

    Full Text Available For the past two decades, China’s urbanization has attracted increasing attention from scholars around the world. Numerous insightful studies have attempted to determine the socioeconomic causes of the rapid urban growth in Chinese cities. However, most of these studies regarded each city as a single entity, with few considering inter-city relationships. The present study uses a gravity-based model to measure the spatial interaction among city clusters in the Wuhan urban agglomeration (WUA, which is one of China’s most rapidly urbanizing regions. The effects of spatial interaction on urban growth area were also analyzed. Empirical results indicate that, similar to urban population or employment in secondary and tertiary industries in the WUA from 2000 to 2005, the spatial interaction among city clusters is one of the main drivers of urban growth. In fact, this study finds the effects of spatial interaction as the only socioeconomic factor that affected the spatial expansion from 2005 to 2010. This finding suggests that population migration and information and commodity flows showed greater influence than the socioeconomic drivers of each city did on promoting urbanization in the WUA during this period. We thus argue that spatial interaction among city clusters should be a consideration in future regional planning.

  10. Broad-scale spatial pattern of forest landscape types in the Guiana Shield

    Science.gov (United States)

    Gond, Valéry; Freycon, Vincent; Molino, Jean-François; Brunaux, Olivier; Ingrassia, Florent; Joubert, Pierre; Pekel, Jean-François; Prévost, Marie-Françoise; Thierron, Viviane; Trombe, Pierre-Julien; Sabatier, Daniel

    2011-06-01

    Detecting broad scale spatial patterns across the South American rainforest biome is still a major challenge. Although several countries do possess their own, more or less detailed land-cover map, these are based on classifications that appear largely discordant from a country to another. Up to now, continental scale remote sensing studies failed to fill this gap. They mostly result in crude representations of the rainforest biome as a single, uniform vegetation class, in contrast with open vegetations. A few studies identified broad scale spatial patterns, but only when they managed to map a particular forest characteristic such as biomass. The main objective of this study is to identify, characterize and map distinct forest landscape types within the evergreen lowland rainforest at the sub-continental scale of the Guiana Shield (north-east tropical South-America 10° North-2° South; 66° West-50° West). This study is based on the analysis of a 1-year daily data set (from January 1st to December 31st, 2000) from the VEGETATION sensor onboard the SPOT-4 satellite (1-km spatial resolution). We interpreted remotely sensed landscape classes (RSLC) from field and high resolution remote sensing data of 21 sites in French Guiana. We cross-analyzed remote sensing data, field observations and environmental data using multivariate analysis. We obtained 33 remotely sensed landscape classes (RSLC) among which five forest-RSLC representing 78% of the forested area. The latter were classified as different broad forest landscape types according to a gradient of canopy openness. Their mapping revealed a new and meaningful broad-scale spatial pattern of forest landscape types. At the scale of the Guiana Shield, we observed a spatial patterns similarity between climatic and forest landscape types. The two most open forest-RSLCs were observed mainly within the north-west to south-east dry belt. The three other forest-RSLCs were observed in wetter and less anthropized areas

  11. Recommendation Systems for Geoscience Data Portals Built by Analyzing Usage Patterns

    Science.gov (United States)

    Crosby, C.; Nandigam, V.; Baru, C.

    2009-04-01

    selections. However, this paradigm has not yet been explored for geoscience data portals. In this presentation we will present an initial analysis of user interaction and access statistics for the GEON OpenTopography LiDAR data distribution and processing system to illustrate what they reveal about user's spatial and temporal data access patterns, data processing parameter selections, and pathways through the data portal. We also demonstrate what these usage statistics can illustrate about aspects of the data sets that are of greatest interest. Finally, we explore how these usage statistics could be used to improve the user's experience in the data portal and to optimize how data access interfaces and tools are designed and implemented.

  12. Historical Patterns and Drivers of Spatial Changes in Recreational Fishing Activity in Puget Sound, Washington.

    Directory of Open Access Journals (Sweden)

    Anne H Beaudreau

    Full Text Available Small-scale fisheries are the primary users of many coastal fish stocks; yet, spatial and temporal patterns of recreational and subsistence fishing in coastal marine ecosystems are poorly documented. Knowledge about the spatial distribution of fishing activities can inform place-based management that balances species conservation with opportunities for recreation and subsistence. We used a participatory mapping approach to document changes in spatial fishing patterns of 80 boat-based recreational anglers from 1950 to 2010 in Puget Sound, Washington, USA. Hand-drawn fishing areas for salmon, rockfishes, flatfishes, and crabs were digitized and analyzed in a Geographic Information System. We found that recreational fishing has spanned the majority of Puget Sound since the 1950s, with the heaviest use limited to small areas of central and northern Puget Sound. People are still fishing in the same places they were decades ago, with relatively little change in specific locations despite widespread declines in salmon and bottomfish populations during the second half of the 20th century. While the location of core fishing areas remained consistent, the size of those areas and intensity of use changed over time. The size of fishing areas increased through the 2000s for salmon but declined after the 1970s and 1980s for rockfishes, flatfishes, and crabs. Our results suggest that the spatial extent of recreational bottomfishing increased after the 1960s, when the availability of motorized vessels and advanced fish-finding technologies allowed anglers to expand their scope beyond localized angling from piers and boathouses. Respondents offered a wide range of reasons for shifts in fishing areas over time, reflecting substantial individual variation in motivations and behaviors. Changes in fishing areas were most commonly attributed to changes in residence and declines in target species and least tied to fishery regulations, despite the implementation of at

  13. Historical Patterns and Drivers of Spatial Changes in Recreational Fishing Activity in Puget Sound, Washington

    Science.gov (United States)

    Beaudreau, Anne H.; Whitney, Emily J.

    2016-01-01

    Small-scale fisheries are the primary users of many coastal fish stocks; yet, spatial and temporal patterns of recreational and subsistence fishing in coastal marine ecosystems are poorly documented. Knowledge about the spatial distribution of fishing activities can inform place-based management that balances species conservation with opportunities for recreation and subsistence. We used a participatory mapping approach to document changes in spatial fishing patterns of 80 boat-based recreational anglers from 1950 to 2010 in Puget Sound, Washington, USA. Hand-drawn fishing areas for salmon, rockfishes, flatfishes, and crabs were digitized and analyzed in a Geographic Information System. We found that recreational fishing has spanned the majority of Puget Sound since the 1950s, with the heaviest use limited to small areas of central and northern Puget Sound. People are still fishing in the same places they were decades ago, with relatively little change in specific locations despite widespread declines in salmon and bottomfish populations during the second half of the 20th century. While the location of core fishing areas remained consistent, the size of those areas and intensity of use changed over time. The size of fishing areas increased through the 2000s for salmon but declined after the 1970s and 1980s for rockfishes, flatfishes, and crabs. Our results suggest that the spatial extent of recreational bottomfishing increased after the 1960s, when the availability of motorized vessels and advanced fish-finding technologies allowed anglers to expand their scope beyond localized angling from piers and boathouses. Respondents offered a wide range of reasons for shifts in fishing areas over time, reflecting substantial individual variation in motivations and behaviors. Changes in fishing areas were most commonly attributed to changes in residence and declines in target species and least tied to fishery regulations, despite the implementation of at least 25 marine

  14. Spatial patterns of schistosomiasis in Burkina Faso: relevance of human mobility and water resources development

    Science.gov (United States)

    Perez-Saez, Javier; Bertuzzo, Enrico; Frohelich, Jean-Marc; Mande, Theophile; Ceperley, Natalie; Sou, Mariam; Yacouba, Hamma; Maiga, Hamadou; Sokolow, Susanne; De Leo, Giulio; Casagrandi, Renato; Gatto, Marino; Mari, Lorenzo; Rinaldo, Andrea

    2015-04-01

    We study the spatial geography of schistosomiasis in the african context of Burkina Faso by means of a spatially explicit model of disease dynamics and spread. The relevance of our work lies in its ability to describe quantitatively a geographic stratification of the disease burden capable of reproducing important spatial differences, and drivers/controls of disease spread. Among the latters, we consider specifically the development and management of water resources which have been singled out empirically as an important risk factor for schistosomiasis. The model includes remotely acquired and objectively manipulated information on the distributions of population, infrastructure, elevation and climatic drivers. It also includes a general description of human mobility and addresses a first-order characterization of the ecology of the intermediate host of the parasite causing the disease based on maximum entropy learning of relevant environmenal covariates. Spatial patterns of the disease were analyzed about their disease-free equilibrium by proper extraction and mapping of suitable eigenvectors of the Jacobian matrix subsuming all stability properties of the system. Human mobility was found to be a primary control of both pathogen invasion success and of the overall distribution of disease burden. The effects of water resources development were studied by accounting for the (prior and posterior) average distances of human settlements from water bodies that may serve as suitable habitats to the intermediate host of the parasite. Water developments, in combination with human mobility, were quantitatively related to disease spread into regions previously nearly disease-free and to large-scale empirical incidence patterns. We concluded that while the model still needs refinements based on field and epidemiological evidence, the framework proposed provides a powerful tool for large-scale, long-term public health planning and management of schistosomiasis.

  15. Pattern-mixture models for analyzing normal outcome data with proxy respondents.

    Science.gov (United States)

    Shardell, Michelle; Hicks, Gregory E; Miller, Ram R; Langenberg, Patricia; Magaziner, Jay

    2010-06-30

    Studies of older adults often involve interview questions regarding subjective constructs such as perceived disability. In some studies, when subjects are unable (e.g. due to cognitive impairment) or unwilling to respond to these questions, proxies (e.g. relatives or other care givers) are recruited to provide responses in place of the subject. Proxies are usually not approached to respond on behalf of subjects who respond for themselves; thus, for each subject, data from only one of the subject or proxy are available. Typically, proxy responses are simply substituted for missing subject responses, and standard complete-data analyses are performed. However, this approach may introduce measurement error and produce biased parameter estimates. In this paper, we propose using pattern-mixture models that relate non-identifiable parameters to identifiable parameters to analyze data with proxy respondents. We posit three interpretable pattern-mixture restrictions to be used with proxy data, and we propose estimation procedures using maximum likelihood and multiple imputation. The methods are applied to a cohort of elderly hip-fracture patients. (c) 2010 John Wiley & Sons, Ltd.

  16. Spatial and seasonal patterns of European short-snouted seahorse ...

    African Journals Online (AJOL)

    North-East Atlantic), determining the spatial and seasonal abundance, population structure and physical appearance of European short-snouted seahorse Hippocampus hippocampus. Animals were surveyed off Gran Canaria Island in two ...

  17. Handedness and spatial ability: differential patterns of relationships.

    Science.gov (United States)

    Reio, Thomas G; Czarnolewski, Mark; Eliot, John

    2004-07-01

    The purpose of this exploratory study was to add to our understanding of hemispheric specialisation by examining the relationships between functional laterality (as measured by handedness, eyedness, earedness, and footedness) and spatial tests. A total of 55 males and 170 females were tested for laterality preferences and spatial test performance using a range of six spatial tests. There was a statistically significant relationship between each of the laterality measures employed, with handedness and footedness demonstrating the most robust association. Multiple regression analyses highlighted that once potential confounds were statistically controlled (age, sex, and other types of functional laterality), 3-D rotation/visualisation and speeded visual exploration task performance showed small, but significant, relations with a tendency towards left-handedness over right-handedness in total and secondary (two-handed) scale scores. Flexibility of closure performance was associated with a tendency towards left-handedness in the total and one-handed scale scores. Spatial location memory was the lone spatial ability relating with a tendency towards right-handedness. Overall, these findings offer new insights into the interplay of handedness with alternative measures of laterality as well as with spatial abilities.

  18. Ecotracer: analyzing concentration of contaminants and radioisotopes in an aquatic spatial-dynamic food web model.

    Science.gov (United States)

    Walters, William J; Christensen, Villy

    2018-01-01

    Ecotracer is a tool in the Ecopath with Ecosim (EwE) software package used to simulate and analyze the transport of contaminants such as methylmercury or radiocesium through aquatic food webs. Ecotracer solves the contaminant dynamic equations simultaneously with the biomass dynamic equations in Ecosim/Ecospace. In this paper, we give a detailed description of the Ecotracer module and analyze the performance on two problems of differing complexity. Ecotracer was modified from previous versions to more accurately model contaminant excretion, and new numerical integration algorithms were implemented to increase accuracy and robustness. To test the mathematical robustness of the computational algorithm, Ecotracer was tested on a simple problem for which we know an analytical solution. These results demonstrated the effectiveness of the program numerics. A much more complex model, the release of the cesium radionuclide 137 Cs from the Fukushima Dai-ichi nuclear accident, was also modeled and analyzed. A comparison of the Ecotracer results to sampled 137 Cs measurements in the coastal ocean area around Fukushima show the promise of the tool but also highlight some important limitations. Copyright © 2017 Elsevier Ltd. All rights reserved.

  19. Identification of two-phase flow pattern by using specific spatial frequency of differential pressure signal

    International Nuclear Information System (INIS)

    Han Bin; Tong Yunxian; Wu Shaorong

    1992-11-01

    It is a classical method by using analysis of differential pressure fluctuation signal to identify two-phase flow pattern. The method which uses trait peak in the frequency-domain will result confusion between bubble flow and intermittent flow due to the influence of gas speed. Considering the spatial geometric significance of two-phase slow patterns and using the differential pressure gauge as a sensor, the Strouhal number 'Sr' is taken as the basis for distinguishing flow patterns. Using Strouhal number 'Sr' to identify flow pattern has clear physical meaning. The experimental results using the spatial analytical technique to measure the flow pattern are also given

  20. Experimental Investigation of Spatially-Periodic Scalar Patterns in an Inline Mixer

    Science.gov (United States)

    Baskan, Ozge; Speetjens, Michel F. M.; Clercx, Herman J. H.

    2015-11-01

    Spatially persisting patterns with exponentially decaying intensities form during the downstream evolution of passive scalars in three-dimensional (3D) spatially periodic flows due to the coupled effect of the chaotic nature of the flow and the diffusivity of the material. This has been investigated in many computational and theoretical studies on 3D spatially-periodic flow fields. However, in the limit of zero-diffusivity, the evolution of the scalar fields results in more detailed structures that can only be captured by experiments due to limitations in the computational tools. Our study employs the-state-of-the-art experimental methods to analyze the evolution of 3D advective scalar field in a representative inline mixer, called Quatro static mixer. The experimental setup consists of an optically accessible test section with transparent internal elements, accommodating a pressure-driven pipe flow and equipped with 3D Laser-Induced Fluorescence. The results reveal that the continuous process of stretching and folding of material creates finer structures as the flow progresses, which is an indicator of chaotic advection and the experiments outperform the simulations by revealing far greater level of detail.

  1. A novel spatial performance metric for robust pattern optimization of distributed hydrological models

    Science.gov (United States)

    Stisen, S.; Demirel, C.; Koch, J.

    2017-12-01

    Evaluation of performance is an integral part of model development and calibration as well as it is of paramount importance when communicating modelling results to stakeholders and the scientific community. There exists a comprehensive and well tested toolbox of metrics to assess temporal model performance in the hydrological modelling community. On the contrary, the experience to evaluate spatial performance is not corresponding to the grand availability of spatial observations readily available and to the sophisticate model codes simulating the spatial variability of complex hydrological processes. This study aims at making a contribution towards advancing spatial pattern oriented model evaluation for distributed hydrological models. This is achieved by introducing a novel spatial performance metric which provides robust pattern performance during model calibration. The promoted SPAtial EFficiency (spaef) metric reflects three equally weighted components: correlation, coefficient of variation and histogram overlap. This multi-component approach is necessary in order to adequately compare spatial patterns. spaef, its three components individually and two alternative spatial performance metrics, i.e. connectivity analysis and fractions skill score, are tested in a spatial pattern oriented model calibration of a catchment model in Denmark. The calibration is constrained by a remote sensing based spatial pattern of evapotranspiration and discharge timeseries at two stations. Our results stress that stand-alone metrics tend to fail to provide holistic pattern information to the optimizer which underlines the importance of multi-component metrics. The three spaef components are independent which allows them to complement each other in a meaningful way. This study promotes the use of bias insensitive metrics which allow comparing variables which are related but may differ in unit in order to optimally exploit spatial observations made available by remote sensing

  2. Large-scale spatial patterns within soft-bottom epibenthic ...

    African Journals Online (AJOL)

    Knowledge of benthic invertebrate biodiversity and distribution patterns over the continental shelf of South Africa is poor and this is hampering efforts to design a network of marine protected areas aimed at conserving regional benthic biota. We analysed invertebrate biodiversity patterns within the offshore benthos along the ...

  3. Spatial pattern of Baccharis platypoda shrub as determined by sex and life stages

    Science.gov (United States)

    Fonseca, Darliana da Costa; de Oliveira, Marcio Leles Romarco; Pereira, Israel Marinho; Gonzaga, Anne Priscila Dias; de Moura, Cristiane Coelho; Machado, Evandro Luiz Mendonça

    2017-11-01

    Spatial patterns of dioecious species can be determined by their nutritional requirements and intraspecific competition, apart from being a response to environmental heterogeneity. The aim of the study was to evaluate the spatial pattern of populations of a dioecious shrub reporting to sex and reproductive stage patterns of individuals. Sampling was carried out in three areas located in the meridional portion of Serra do Espinhaço, where in individuals of the studied species were mapped. The spatial pattern was determined through O-ring analysis and Ripley's K-function and the distribution of individuals' frequencies was verified through x2 test. Populations in two areas showed an aggregate spatial pattern tending towards random or uniform according to the observed scale. Male and female adults presented an aggregate pattern at smaller scales, while random and uniform patterns were verified above 20 m for individuals of both sexes of the areas A2 and A3. Young individuals presented an aggregate pattern in all areas and spatial independence in relation to adult individuals, especially female plants. The interactions between individuals of both genders presented spatial independence with respect to spatial distribution. Baccharis platypoda showed characteristics in accordance with the spatial distribution of savannic and dioecious species, whereas the population was aggregated tending towards random at greater spatial scales. Young individuals showed an aggregated pattern at different scales compared to adults, without positive association between them. Female and male adult individuals presented similar characteristics, confirming that adult individuals at greater scales are randomly distributed despite their distinct preferences for environments with moisture variation.

  4. Taxonomical and ecological characteristics of the desmids placoderms in reservoir: analyzing the spatial and temporal distribution

    Directory of Open Access Journals (Sweden)

    Sirlene Aparecida Felisberto

    2014-12-01

    Full Text Available AIM: This study aimed to evaluate the influence of river-dam axis and abiotic factors on the composition of Closteriaceae, Gonatozygaceae, Mesotaeniaceae and Peniaceae in a tropical reservoir METHODS: Water samples for physical, chemical and periphyton analysis were collected in April and August 2002 in different regions along the axis of the river-dam of Rosana Reservoir, River Basin Paranapanema. The substrates collected, always in the litoranea region, were petioles of Eichhornia azurea (Swartz Kunth. To examine the relationship of abiotic variables with reservoir zones and between the floristic composition of desmids, we used principal component analysis (PCA and canonical correspondence analysis (CCA RESULTS: The results of the PCA explained 81.3% of the total variability in the first two axes. In the first axis, the variables of conductivity, water temperature and the pH were related to the sampling regions of April with higher values, while for the month of August, nitrate, total phosphorus and dissolved oxygen showed higher values. We identified 20 taxa, distributed in the genera Closterium (14, Gonatozygon (4, Netrium (1 and Penium (1. Spatially, the higher taxa were recorded in the lacustrine region for both collection periods. The canonical correspondence analysis (CCA summarized 62.2% of total data variability of taxa in the first two axes, and in August, Closterium incurvum Brébisson, C. cornu Ehrenberg ex Ralfs and Gonatozygon monotaenium De Bary, were related to higher values of turbidity and nitrate to the lacustrine and intermediate regions CONCLUSION: Thus, the formation of groups was due to the regions along the longitudinal axis, then the seasonal period, which must be related to the low current velocity, the higher values of temperature and the water transparency, especially in late summer

  5. A word-count approach to analyze linguistic patterns in the reflective writings of medical students

    Science.gov (United States)

    Lin, Chi-Wei; Lin, Meei-Ju; Wen, Chin-Chen; Chu, Shao-Yin

    2016-01-01

    Background Teaching reflection and administering reflective writing assignments to students are widely practiced and discussed in medical education and health professional education. However, little is known about how medical students use language to construct their narratives. Exploring students’ linguistic patterns in their reflective writings can facilitate understanding the scope and facets of their reflections and their representational or communication approaches to share their experiences. Moreover, research findings regarding gender differences in language use are inconsistent. Therefore, we attempted to examine how females and males differ in their use of words in reflective writing within our research circumstance to detect the unique and gender-specific approaches to learning and their applications. Methods We analyzed the linguistic profiles of psychological process categories in the reflective writings of medical students and examined the difference in word usage between male and female medical students. During the first year of a clinical rotation, 60 fifth-year medical students wrote reflective narratives regarding pediatric patients and the psychosocial challenges faced by the patients and their family members. The narratives were analyzed using the Chinese version of Linguistic Inquiry and Word Count (CLIWC), a text analysis software program. Multivariate procedures were applied for statistical analysis. Results Cognitive words were most pervasive, averaging 22.16%, whereas perceptual words (2.86%) were least pervasive. Female students used more words related to positive emotions and sadness than did male students. The male students exceeded the female students only in the space category. The major limitation of this study is that CLIWC cannot directly acquire contextual text meanings; therefore, depending on the research topic, further qualitative study of the given texts might be necessary. Conclusions To enhance students’ empathy toward the

  6. A word-count approach to analyze linguistic patterns in the reflective writings of medical students

    Directory of Open Access Journals (Sweden)

    Chi-Wei Lin

    2016-02-01

    Full Text Available Background: Teaching reflection and administering reflective writing assignments to students are widely practiced and discussed in medical education and health professional education. However, little is known about how medical students use language to construct their narratives. Exploring students’ linguistic patterns in their reflective writings can facilitate understanding the scope and facets of their reflections and their representational or communication approaches to share their experiences. Moreover, research findings regarding gender differences in language use are inconsistent. Therefore, we attempted to examine how females and males differ in their use of words in reflective writing within our research circumstance to detect the unique and gender-specific approaches to learning and their applications. Methods: We analyzed the linguistic profiles of psychological process categories in the reflective writings of medical students and examined the difference in word usage between male and female medical students. During the first year of a clinical rotation, 60 fifth-year medical students wrote reflective narratives regarding pediatric patients and the psychosocial challenges faced by the patients and their family members. The narratives were analyzed using the Chinese version of Linguistic Inquiry and Word Count (CLIWC, a text analysis software program. Multivariate procedures were applied for statistical analysis. Results: Cognitive words were most pervasive, averaging 22.16%, whereas perceptual words (2.86% were least pervasive. Female students used more words related to positive emotions and sadness than did male students. The male students exceeded the female students only in the space category. The major limitation of this study is that CLIWC cannot directly acquire contextual text meanings; therefore, depending on the research topic, further qualitative study of the given texts might be necessary. Conclusions: To enhance students

  7. Exploring spatial patterns and hotspots of diarrhea in Chiang Mai, Thailand

    Directory of Open Access Journals (Sweden)

    Tripathi Nitin K

    2009-06-01

    Full Text Available Abstract Background Diarrhea is a major public health problem in Thailand. The Ministry of Public Health, Thailand, has been trying to monitor and control this disease for many years. The methodology and the results from this study could be useful for public health officers to develop a system to monitor and prevent diarrhea outbreaks. Methods The objective of this study was to analyse the epidemic outbreak patterns of diarrhea in Chiang Mai province, Northern Thailand, in terms of their geographical distributions and hotspot identification. The data of patients with diarrhea at village level and the 2001–2006 population censuses were collected to achieve the objective. Spatial analysis, using geographic information systems (GIS and other methods, was used to uncover the hidden phenomena from the data. In the data analysis section, spatial statistics such as quadrant analysis (QA, nearest neighbour analysis (NNA, and spatial autocorrelation analysis (SAA, were used to identify the spatial patterns of diarrhea in Chiang Mai province. In addition, local indicators of spatial association (LISA and kernel density (KD estimation were used to detect diarrhea hotspots using data at village level. Results The hotspot maps produced by the LISA and KD techniques showed spatial trend patterns of diarrhea diffusion. Villages in the middle and northern regions revealed higher incidences. Also, the spatial patterns of diarrhea during the years 2001 and 2006 were found to represent spatially clustered patterns, both at global and local scales. Conclusion Spatial analysis methods in GIS revealed the spatial patterns and hotspots of diarrhea in Chiang Mai province from the year 2001 to 2006. To implement specific and geographically appropriate public health risk-reduction programs, the use of such spatial analysis tools may become an integral component in the epidemiologic description, analysis, and risk assessment of diarrhea.

  8. Geometric anisotropic spatial point pattern analysis and Cox processes

    DEFF Research Database (Denmark)

    Møller, Jesper; Toftaker, Håkon

    . In particular we study Cox process models with an elliptical pair correlation function, including shot noise Cox processes and log Gaussian Cox processes, and we develop estimation procedures using summary statistics and Bayesian methods. Our methodology is illustrated on real and synthetic datasets of spatial...

  9. Simulating the influence of crop spatial patterns on canola yield

    DEFF Research Database (Denmark)

    Griepentrog, H.W.; Nielsen, J.; Olsen, Jannie Maj

    2011-01-01

    The current non-uniform crop spatial distributions of individual cereal plants and widerspaced row crops like maize and sugar beet can limit crop performance because of nonoptimal resource utilization. The aim of the present study was to investigate the potential influence of two-dimensional crop...

  10. First contact distributions for spatial patterns: regularity and estimation

    NARCIS (Netherlands)

    Hansen, M.B.; Baddeley, A.J.; Gill, R.D.

    1999-01-01

    For applications in spatial statistics an important property of a random set X in Rk is its rst contact distribution This is the distribution of the distance from a xed point to the nearest point of X where distance is measured using scalar dilations of a xed test set B We show that if B is convex

  11. Spatial and temporal dynamics of land use pattern response to ...

    African Journals Online (AJOL)

    Urban settlements account for only two percent of the Earth's land surface. However, over half of the world's population resides in cities (United Nations, 2001). The quantitative evidences presented here showed that there were drastic changes in the temporal and spatial dynamics of land use/land cover. As an overall ...

  12. Analysis of spatial pattern of settlements in the federal capital ...

    African Journals Online (AJOL)

    Human settlements are important, seemingly static but dynamic, features of the cultural landscape that have attracted several studies due to the important role they play in human life. This paper examined the spatial distribution of settlements in the Federal Capital Territory (FCT) of Nigeria. The analysis uses vector based ...

  13. Modeling spatial pattern of deforestation using GIS and logistic ...

    African Journals Online (AJOL)

    This study aimed to predict spatial distribution of deforestation and detects factors influencing forest degradation of Northern forests of Ilam province. For this purpose, effects of six factors including distance from road and settlement areas, forest fragmentation index, elevation, slope and distance from the forest edge on the ...

  14. Analyzing Architecture Patterns for Enterprise-level, multi-mission Data Systems

    Science.gov (United States)

    Pfister, R.; Burnett, M.

    2008-12-01

    There are a number of agencies and institutions who, as part of their business processes, store and manage large amounts of science-related data resources. These organizations are challenged with collecting, processing, archiving, providing access to, and distributing that data. The Data Systems are tuned to meet their organization's responsibilities and work within the policies and governance mechanisms of those organizations. While serving different kinds of data, and targeting different user communities and supporting different business processes, these systems are all facing similar problems. This paper presents an approach for the analysis of the underlying architectures of these Data Systems. This approach is based on the development of a common way to describe the drivers, influences and characteristics of enterprise-level data systems. With the establishment of a common language for describing this pattern, we propose a survey where information describing these myriad solutions can be captured and analyzed. With this analysis, the community can identify common trends in enterprise-level architectures for science Data Systems, identify the strengths and weaknesses of alternatives, and establish a platform for the analysis of alternative architectures for future Data Systems.

  15. Analyzing crack development pattern of masonry structure in seismic oscillation by digital photography

    Science.gov (United States)

    Zhang, Guojian; Yu, Chengxin; Ding, Xinhua

    2018-01-01

    In this study, digital photography is used to monitor the instantaneous deformation of a masonry wall in seismic oscillation. In order to obtain higher measurement accuracy, the image matching-time baseline parallax method (IM-TBPM) is used to correct errors caused by the change of intrinsic and extrinsic parameters of digital cameras. Results show that the average errors of control point C5 are 0.79mm, 0.44mm and 0.96mm in X, Z and comprehensive direction, respectively. The average errors of control point C6 are 0.49mm, 0.44mm and 0.71mm in X, Z and comprehensive direction, respectively. These suggest that IM-TBPM can meet the accuracy requirements of instantaneous deformation monitoring. In seismic oscillation the middle to lower of the masonry wall develops cracks firstly. Then the shear failure occurs on the middle of masonry wall. This study provides technical basis for analyzing the crack development pattern of masonry structure in seismic oscillation and have significant implications for improved construction of masonry structures in earthquake prone areas.

  16. Is Reading Instruction Evidence-Based? Analyzing Teaching Practices Using T-Patterns

    Directory of Open Access Journals (Sweden)

    Natalia Suárez

    2018-02-01

    Full Text Available The main goal of this study was to analyze whether primary teachers use evidence-based reading instruction for primary-grade readers. The study sample consisted of six teachers whose teaching was recorded. The observation instrument used was developed ad hoc for this study. The recording instrument used was Match Vision Studio. The data analysis was performed using SAS, GT version 2.0 E, and THEME. The results indicated that the teaching practices used most frequently and for the longest duration were: feedback (i.e., correcting the student when reading; fluency (i.e., individual and group reading, both out loud and silently, with and without intonation; literal or inference comprehension exercises (i.e., summarizing, asking questions; and use of educational resources (i.e., stories, songs, poems. Later, we conducted analyses of T-Patterns that showed the sequence of instruction in detail. We can conclude that <50% of the teaching practices used by the majority of teachers were based on the recommendations of the National Reading Panel (NRP. Only one teacher followed best practices. The same was the case for instructional time spent on the five essential components of reading, with the exception of teacher E., who dedicated 70.31% of class time implementing best practices. Teaching practices (i.e., learners' activities designed and implemented to exercise and master alphabetic knowledge and phonological awareness skills were used less frequently in the classroom.

  17. Is Reading Instruction Evidence-Based? Analyzing Teaching Practices Using T-Patterns.

    Science.gov (United States)

    Suárez, Natalia; Sánchez, Carmen R; Jiménez, Juan E; Anguera, M Teresa

    2018-01-01

    The main goal of this study was to analyze whether primary teachers use evidence-based reading instruction for primary-grade readers. The study sample consisted of six teachers whose teaching was recorded. The observation instrument used was developed ad hoc for this study. The recording instrument used was Match Vision Studio. The data analysis was performed using SAS, GT version 2.0 E, and THEME. The results indicated that the teaching practices used most frequently and for the longest duration were: feedback (i.e., correcting the student when reading); fluency (i.e., individual and group reading, both out loud and silently, with and without intonation); literal or inference comprehension exercises (i.e., summarizing, asking questions); and use of educational resources (i.e., stories, songs, poems). Later, we conducted analyses of T-Patterns that showed the sequence of instruction in detail. We can conclude that teaching practices used by the majority of teachers were based on the recommendations of the National Reading Panel (NRP). Only one teacher followed best practices. The same was the case for instructional time spent on the five essential components of reading, with the exception of teacher E., who dedicated 70.31% of class time implementing best practices. Teaching practices (i.e., learners' activities) designed and implemented to exercise and master alphabetic knowledge and phonological awareness skills were used less frequently in the classroom.

  18. Analyzing spatial clustering and the spatiotemporal nature and trends of HIV/AIDS prevalence using GIS: the case of Malawi, 1994-2010.

    Science.gov (United States)

    Zulu, Leo C; Kalipeni, Ezekiel; Johannes, Eliza

    2014-05-23

    Although local spatiotemporal analysis can improve understanding of geographic variation of the HIV epidemic, its drivers, and the search for targeted interventions, it is limited in sub-Saharan Africa. Despite recent declines, Malawi's estimated 10.0% HIV prevalence (2011) remained among the highest globally. Using data on pregnant women in Malawi, this study 1) examines spatiotemporal trends in HIV prevalence 1994-2010, and 2) for 2010, identifies and maps the spatial variation/clustering of factors associated with HIV prevalence at district level. Inverse distance weighting was used within ArcGIS Geographic Information Systems (GIS) software to generate continuous surfaces of HIV prevalence from point data (1994, 1996, 1999, 2001, 2003, 2005, 2007, and 2010) obtained from surveillance antenatal clinics. From the surfaces prevalence estimates were extracted at district level and the results mapped nationally. Spatial dependency (autocorrelation) and clustering of HIV prevalence were also analyzed. Correlation and multiple regression analyses were used to identify factors associated with HIV prevalence for 2010 and their spatial variation/clustering mapped and compared to HIV clustering. Analysis revealed wide spatial variation in HIV prevalence at regional, urban/rural, district and sub-district levels. However, prevalence was spatially leveling out within and across 'sub-epidemics' while declining significantly after 1999. Prevalence exhibited statistically significant spatial dependence nationally following initial (1995-1999) localized, patchy low/high patterns as the epidemic spread rapidly. Locally, HIV "hotspots" clustered among eleven southern districts/cities while a "coldspot" captured configurations of six central region districts. Preliminary multiple regression of 2010 HIV prevalence produced a model with four significant explanatory factors (adjusted R2 = 0.688): mean distance to main roads, mean travel time to nearest transport, percentage that had

  19. Analyzing Spatial Behavior of Backcountry Skiers in Mountain Protected Areas Combining GPS Tracking and Graph Theory

    Directory of Open Access Journals (Sweden)

    Karolina Taczanowska

    2017-12-01

    Full Text Available Mountain protected areas (PAs aim to preserve vulnerable environments and at the same time encourage numerous outdoor leisure activities. Understanding the way people use natural environments is crucial to balance the needs of visitors and site capacities. This study aims to develop an approach to evaluate the structure and use of designated skiing zones in PAs combining Global Positioning System (GPS tracking and analytical methods based on graph theory. The study is based on empirical data (n = 609 GPS tracks of backcountry skiers collected in Tatra National Park (TNP, Poland. The physical structure of the entire skiing zones system has been simplified into a graph structure (structural network; undirected graph. In a second step, the actual use of the area by skiers (functional network; directed graph was analyzed using a graph-theoretic approach. Network coherence (connectivity indices: β, γ, α, movement directions at path segments, and relative importance of network nodes (node centrality measures: degree, betweenness, closeness, and proximity prestige were calculated. The system of designated backcountry skiing zones was not evenly used by the visitors. Therefore, the calculated parameters differ significantly between the structural and the functional network. In particular, measures related to the actually used trails are of high importance from the management point of view. Information about the most important node locations can be used for planning sign-posts, on-site maps, interpretative boards, or other tourist infrastructure.

  20. Urban Landscape Spatial Pattern Estimation of Cities in Shandong Province Using Nighttime Luminosity Data

    Science.gov (United States)

    Fan, J.; He, H.; Hu, T.; Li, G.; Gao, H.; Zhao, X.

    2017-09-01

    China's cities have been undergoing rapid and intense urbanization processes in the past few decades. Shandong is a coastal province which is located in East China with big economy and population scales, and which also plays an important role in the rapid process of China's modernization. The DMSP/OLS dataset has been widely used for the urban development assessments in long time-series and large spatial scales situations. In this paper, we used a time series of nighttime light data to estimate the landscape spatial pattern changes of cities in Shandong province from 1994 to 2012. Nine landscape metrics were calculated and analyzed to figure out the spatial patterns of urban area developments of the cities in Shandong province. The landscape metrics include the number of patches (NP), the landscape total area (TA), the aggregation index (AI), the largest patch index (LPI), the mean patch area (AREA_MN), the landscape shape index (LSI), the total edge length (TE), the edge density (ED), and the mean radius of gyration (GYRATE_MN). The experimental results reveal that, in 1994-2012, the total urban area of cities in Shandong province expanded for 1.17 times, the average urban area increased by about 93.00%, the average annual growth rate of the TE metric is 2.67 %, while the ED metric decreased about 1.44 % annually. Bigger cities in this area show relative slower urbanization development processes, such as Jinan and Qingdao. Coastal cities represented much more rapid expansion velocities than inland cities. In the middle area of Shandong province, the connectivity between developed urban areas was constantly increased.

  1. URBAN LANDSCAPE SPATIAL PATTERN ESTIMATION OF CITIES IN SHANDONG PROVINCE USING NIGHTTIME LUMINOSITY DATA

    Directory of Open Access Journals (Sweden)

    J. Fan

    2017-09-01

    Full Text Available China’s cities have been undergoing rapid and intense urbanization processes in the past few decades. Shandong is a coastal province which is located in East China with big economy and population scales, and which also plays an important role in the rapid process of China’s modernization. The DMSP/OLS dataset has been widely used for the urban development assessments in long time-series and large spatial scales situations. In this paper, we used a time series of nighttime light data to estimate the landscape spatial pattern changes of cities in Shandong province from 1994 to 2012. Nine landscape metrics were calculated and analyzed to figure out the spatial patterns of urban area developments of the cities in Shandong province. The landscape metrics include the number of patches (NP, the landscape total area (TA, the aggregation index (AI, the largest patch index (LPI, the mean patch area (AREA_MN, the landscape shape index (LSI, the total edge length (TE, the edge density (ED, and the mean radius of gyration (GYRATE_MN. The experimental results reveal that, in 1994–2012, the total urban area of cities in Shandong province expanded for 1.17 times, the average urban area increased by about 93.00%, the average annual growth rate of the TE metric is 2.67 %, while the ED metric decreased about 1.44 % annually. Bigger cities in this area show relative slower urbanization development processes, such as Jinan and Qingdao. Coastal cities represented much more rapid expansion velocities than inland cities. In the middle area of Shandong province, the connectivity between developed urban areas was constantly increased.

  2. Freshwater fish's spatial patterns in isolated water springs in North-eastern Mexico.

    Science.gov (United States)

    Palacio-Núñez, Jorge; Verdú, José R; Numa, Catherine; Jiménez-García, Daniel; Olmos Oropeza, Genaro; Galante, Eduardo

    2010-03-01

    The Media Luna lake-spring was selected as representative of all thermal or no thermal springs in the zone of Valley of Rioverde, a semi-arid vegetation in the North-eastern of Mexico. This system is inhabited by 11 fish species, of which six are native. Four of the native species are endemic to the region and threatened due to touristic pressure and to the introduction of exotic species. The objectives were to determine the characteristics that influence the spatial distribution of the fish species, to analyze their spatial distribution patterns, and to describe the relationships between the different species. The general aim was to establish some basis for the conservation of these fish communities and their habitat. Several sessions were initiated in 1992 through direct observation. Later, between 1998 and 1999 five systematically seasonal sampling sessions were conducted (54 subaquatic transects/session). Finally, the data was updated by sampling in summer 2002 and winter 2006. Through the analysis was performed only for endemics of the region, like Ataeniobius toweri Meek, Cualac tessellatus Miller, Cichlasoma bartoni Bean and C. labridens Pellegrin, in at least one life stage, showed correlation with habitat variables or with other species. For these species, patterns of spatial aggregation and association with other species were observed. These results show a certain degree of specialization of endemic species to some microhabitat characteristics, as well as a significant interaction with other native species which they coexist. In addition, some significant relations between endemic and alien species suggest an antagonist relation. Management actions focused in the touristic use of the spring represent the main threat for these species, followed by an adequate management of exotic species. This study provides basis for future responsible management of these wetlands, where tourism and conservation can be combined.

  3. Analyzing Local Spatio-Temporal Patterns of Police Calls-for-Service Using Bayesian Integrated Nested Laplace Approximation

    Directory of Open Access Journals (Sweden)

    Hui Luan

    2016-09-01

    Full Text Available This research investigates spatio-temporal patterns of police calls-for-service in the Region of Waterloo, Canada, at a fine spatial and temporal resolution. Modeling was implemented via Bayesian Integrated Nested Laplace Approximation (INLA. Temporal patterns for two-hour time periods, spatial patterns at the small-area scale, and space-time interaction (i.e., unusual departures from overall spatial and temporal patterns were estimated. Temporally, calls-for-service were found to be lowest in the early morning (02:00–03:59 and highest in the evening (20:00–21:59, while high levels of calls-for-service were spatially located in central business areas and in areas characterized by major roadways, universities, and shopping centres. Space-time interaction was observed to be geographically dispersed during daytime hours but concentrated in central business areas during evening hours. Interpreted through the routine activity theory, results are discussed with respect to law enforcement resource demand and allocation, and the advantages of modeling spatio-temporal datasets with Bayesian INLA methods are highlighted.

  4. Investigating Spatial Patterns of Persistent Scatterer Interferometry Point Targets and Landslide Occurrences in the Arno River Basin

    Directory of Open Access Journals (Sweden)

    Ping Lu

    2014-07-01

    Full Text Available Persistent Scatterer Interferometry (PSI has been widely used for landslide studies in recent years. This paper investigated the spatial patterns of PSI point targets and landslide occurrences in the Arno River basin in Central Italy. The main purpose is to analyze whether spatial patterns of Persistent Scatterers (PS can be recognized as indicators of landslide occurrences throughout the whole basin. The bivariate K-function was employed to assess spatial relationships between PS and landslides. The PSI point targets were acquired from almost 4 years (from March 2003 to January 2007 of RADARSAT-1 images. The landslide inventory was collected from 15 years (from 1992–2007 of surveying and mapping data, mainly including remote sensing data, topographic maps and field investigations. The proposed approach is able to assess spatial patterns between a variety of PS and landslides, in particular, to understand if PSI point targets are spatially clustered (spatial attraction or randomly distributed (spatial independency on various types of landslides across the basin. Additionally, the degree and scale distances of PS clustering on a variety of landslides can be characterized. The results rejected the null hypothesis that PSI point targets appear to cluster similarly on four types of landslides (slides, flows, falls and creeps in the Arno River basin. Significant influence of PS velocities and acquisition orbits can be noticed on detecting landslides with different states of activities. Despite that the assessment may be influenced by the quality of landslide inventory and Synthetic Aperture Radar (SAR images, the proposed approach is expected to provide guidelines for studies trying to detect and investigate landslide occurrences at a regional scale through spatial statistical analysis of PS, for which an advanced understanding of the impact of scale distances on landslide clustering is fundamentally needed.

  5. Interaction of valleys and circulation patterns (CPs on spatial precipitation patterns in southern Germany

    Directory of Open Access Journals (Sweden)

    M. Liu

    2013-11-01

    Full Text Available Topography exerts influence on the spatial precipitation distribution over different scales, known typically at the large scale as the orographic effect, and at the small scale as the wind-drift rainfall (WDR effect. At the intermediate scale (1~10 km, which is characterized by secondary mountain valleys, topography also demonstrates some effect on the precipitation pattern. This paper investigates such intermediate-scale topographic effects on precipitation patterns, focusing on narrow-steep valleys in the complex terrain of southern Germany, based on the daily observations over a 48 yr period (1960~2007 from a high-density rain-gauge network covering two sub-areas, Baden-Wuerttemberg (BW and Bavaria (BY. Precipitation data at the valley and non-valley stations are compared under consideration of the daily general circulation patterns (CPs classified by a fuzzy rule-based algorithm. Scatter plots of precipitation against elevation demonstrate a different behavior of valley stations comparing to non-valley stations. A detailed study of the precipitation time series for selected station triplets, each consisting of a valley station, a mountain station and an open station have been investigated by statistical analysis with the Kolmogorov–Smirnov (KS test supplemented by the One-way analysis of variance (One-way ANOVA and a graphical comparison of the mean precipitation amounts. The results show an interaction of valley orientation and the direction of the CPs at the intermediate scale, i.e. when the valley is shielded from the CP which carries the precipitation, the precipitation amount within the valley is comparable to that on the mountain crest, and both larger than the precipitation at the open station. When the valley is open to the CP, the precipitation within the valley is similar to the open station but much less than that on the mountain. Such phenomenon where the precipitation is "blind" to the valleys at the intermediate scale

  6. Spatial and temporal patterns of stranded intertidal marine debris: is there a picture of global change?

    Science.gov (United States)

    Browne, Mark Anthony; Chapman, M Gee; Thompson, Richard C; Amaral Zettler, Linda A; Jambeck, Jenna; Mallos, Nicholas J

    2015-06-16

    Floating and stranded marine debris is widespread. Increasing sea levels and altered rainfall, solar radiation, wind speed, waves, and oceanic currents associated with climatic change are likely to transfer more debris from coastal cities into marine and coastal habitats. Marine debris causes economic and ecological impacts, but understanding the scope of these requires quantitative information on spatial patterns and trends in the amounts and types of debris at a global scale. There are very few large-scale programs to measure debris, but many peer-reviewed and published scientific studies of marine debris describe local patterns. Unfortunately, methods of defining debris, sampling, and interpreting patterns in space or time vary considerably among studies, yet if data could be synthesized across studies, a global picture of the problem may be avaliable. We analyzed 104 published scientific papers on marine debris in order to determine how to evaluate this. Although many studies were well designed to answer specific questions, definitions of what constitutes marine debris, the methods used to measure, and the scale of the scope of the studies means that no general picture can emerge from this wealth of data. These problems are detailed to guide future studies and guidelines provided to enable the collection of more comparable data to better manage this growing problem.

  7. Using spatial patterns in illegal wildlife uses to reveal connections between subsistence hunting and trade.

    Science.gov (United States)

    Sánchez-Mercado, Ada; Asmüssen, Marianne; Rodríguez-Clark, Kathryn M; Rodríguez, Jon Paul; Jedrzejewski, Wlodzimierz

    2016-12-01

    Although most often considered independently, subsistence hunting, domestic trade, and international trade as components of illegal wildlife use (IWU) may be spatially correlated. Understanding how and where subsistence and commercial uses may co-occur has important implications for the design and implementation of effective conservation actions. We analyzed patterns in the joint geographical distribution of illegal commercial and subsistence use of multiple wildlife species in Venezuela and evaluated whether available data were sufficient to provide accurate estimates of the magnitude, scope, and detectability of IWU. We compiled records of illegal subsistence hunting and trade from several sources and fitted a random-forest classification model to predict the spatial distribution of IWUs. From 1969 to 2014, 404 species and 8,340,921 specimens were involved in IWU, for a mean extraction rate of 185,354 individuals/year. Birds were the most speciose group involved (248 spp.), but reptiles had the highest extraction rates (126,414 individuals/year vs. 3,133 individuals/year for birds). Eighty-eight percent of international trade records spatially overlapped with domestic trade, especially in the north and along the coast but also in western inland areas. The distribution of domestic trade was broadly distributed along roads, suggesting that domestic trade does not depend on large markets in cities. Seventeen percent of domestic trade records overlapped with subsistence hunting, but the spatial distribution of this overlap covered a much larger area than between commercial uses. Domestic trade seems to respond to demand from rural more than urban communities. Our approach will be useful for understanding how IWU works at national scales in other parts of the world. © 2016 Society for Conservation Biology.

  8. Shifting patterns of Aedes aegypti fine scale spatial clustering in Iquitos, Peru.

    Directory of Open Access Journals (Sweden)

    Genevieve LaCon

    2014-08-01

    Full Text Available Empiric evidence shows that Aedes aegypti abundance is spatially heterogeneous and that some areas and larval habitats produce more mosquitoes than others. There is a knowledge gap, however, with regards to the temporal persistence of such Ae. aegypti abundance hotspots. In this study, we used a longitudinal entomologic dataset from the city of Iquitos, Peru, to (1 quantify the spatial clustering patterns of adult Ae. aegypti and pupae counts per house, (2 determine overlap between clusters, (3 quantify the temporal stability of clusters over nine entomologic surveys spaced four months apart, and (4 quantify the extent of clustering at the household and neighborhood levels.Data from 13,662 household entomological visits performed in two Iquitos neighborhoods differing in Ae. aegypti abundance and dengue virus transmission was analyzed using global and local spatial statistics. The location and extent of Ae. aegypti pupae and adult hotspots (i.e., small groups of houses with significantly [p<0.05] high mosquito abundance were calculated for each of the 9 entomologic surveys. The extent of clustering was used to quantify the probability of finding spatially correlated populations. Our analyses indicate that Ae. aegypti distribution was highly focal (most clusters do not extend beyond 30 meters and that hotspots of high vector abundance were common on every survey date, but they were temporally unstable over the period of study.Our findings have implications for understanding Ae. aegypti distribution and for the design of surveillance and control activities relying on household-level data. In settings like Iquitos, where there is a relatively low percentage of Ae. aegypti in permanent water-holding containers, identifying and targeting key premises will be significantly challenged by shifting hotspots of Ae. aegypti infestation. Focusing efforts in large geographic areas with historically high levels of transmission may be more effective than

  9. Variability of fMRI-response patterns at different spatial observation scales.

    Science.gov (United States)

    Ball, Tonio; Breckel, Thomas P K; Mutschler, Isabella; Aertsen, Ad; Schulze-Bonhage, Andreas; Hennig, Jürgen; Speck, Oliver

    2012-05-01

    Functional organization units of the cerebral cortex exist over a wide range of spatial scales, from local circuits to entire cortical areas. In the last decades, scale-space representations of neuroimaging data suited to probe the multi-scale nature of cortical functional organization have been introduced and methodologically elaborated. For this purpose, responses are statistically detected over a range of spatial scales using a family of Gaussian filters, with small filters being related to fine and large filters-to coarse spatial scales. The goal of the present study was to investigate the degree of variability of fMRI-response patterns over a broad range of observation scales. To this aim, the same fMRI data set obtained from 18 subjects during a visuomotor task was analyzed with a range of filters from 4- to 16-mm full width at half-maximum (FWHM). We found substantial observation-scale-related variability. For example, using filter widths of 6- to 8-mm FWHM, in the group-level results, significant responses in the right secondary visual but not in the primary visual cortex were detected. However, when larger filters were used, the responses in the right primary visual cortex reached significance. Often, responses in probabilistically defined areas were significant when both small and large filters, but not intermediate filter widths were applied. This suggests that brain responses can be organized in local clusters of multiple distinct activation foci. Our findings illustrate the potential of multi-scale fMRI analysis to reveal novel features in the spatial organization of human brain responses. Copyright © 2011 Wiley-Liss, Inc.

  10. Shifting Patterns of Aedes aegypti Fine Scale Spatial Clustering in Iquitos, Peru

    Science.gov (United States)

    LaCon, Genevieve; Morrison, Amy C.; Astete, Helvio; Stoddard, Steven T.; Paz-Soldan, Valerie A.; Elder, John P.; Halsey, Eric S.; Scott, Thomas W.; Kitron, Uriel; Vazquez-Prokopec, Gonzalo M.

    2014-01-01

    Background Empiric evidence shows that Aedes aegypti abundance is spatially heterogeneous and that some areas and larval habitats produce more mosquitoes than others. There is a knowledge gap, however, with regards to the temporal persistence of such Ae. aegypti abundance hotspots. In this study, we used a longitudinal entomologic dataset from the city of Iquitos, Peru, to (1) quantify the spatial clustering patterns of adult Ae. aegypti and pupae counts per house, (2) determine overlap between clusters, (3) quantify the temporal stability of clusters over nine entomologic surveys spaced four months apart, and (4) quantify the extent of clustering at the household and neighborhood levels. Methodologies/Principal Findings Data from 13,662 household entomological visits performed in two Iquitos neighborhoods differing in Ae. aegypti abundance and dengue virus transmission was analyzed using global and local spatial statistics. The location and extent of Ae. aegypti pupae and adult hotspots (i.e., small groups of houses with significantly [p<0.05] high mosquito abundance) were calculated for each of the 9 entomologic surveys. The extent of clustering was used to quantify the probability of finding spatially correlated populations. Our analyses indicate that Ae. aegypti distribution was highly focal (most clusters do not extend beyond 30 meters) and that hotspots of high vector abundance were common on every survey date, but they were temporally unstable over the period of study. Conclusions/Significance Our findings have implications for understanding Ae. aegypti distribution and for the design of surveillance and control activities relying on household-level data. In settings like Iquitos, where there is a relatively low percentage of Ae. aegypti in permanent water-holding containers, identifying and targeting key premises will be significantly challenged by shifting hotspots of Ae. aegypti infestation. Focusing efforts in large geographic areas with historically

  11. Pattern of Spatial Distribution and Temporal Variation of Atmospheric Pollutants during 2013 in Shenzhen, China

    Directory of Open Access Journals (Sweden)

    Xiaolin Xia

    2016-12-01

    Full Text Available Air pollution caused by atmospheric particulate and gaseous pollutants has drawn broad public concern globally. In this paper, the spatial-temporal distributions of major air pollutants in Shenzhen from March 2013 to February 2014 are discussed. In this study, ground-site monitoring data from 19 monitoring sites was used and spatial interpolation and spatial autocorrelation methods were applied to analyze both spatial and temporal characteristics of air pollutants in Shenzhen City. During the study period, the daily average concentrations of Particulate Matter (PM10 and PM2.5 ranged from 16–189 μg/m3 and 10–136 μg/m3, respectively, with 13 and 44 over-limit days, indicating that particulate matter was the primary air pollutant in Shenzhen. The highest PM occupation in the polluted air was observed in winter, indicating that fine particulate pollution was most serious in winter. Meanwhile, seasonal agglomeration patterns for six kinds of air pollutants showed that Guangming, Baoan, Nanshan, and the northern part of Longgang were the most polluted areas and PMs were their primary air pollutants. In addition, wind scale and rainfall played an important role in dissipating air pollutant in Shenzhen. The wind direction impacted the air pollution level in Shenzhen in multiple ways: the highest concentrations for all air pollutants all occurred on days with a northeast wind; the second highest ones appeared on the days with no wind. The concentrations on days with north-related winds are higher on average than those of days with south-related winds.

  12. On Identifying Useful Patterns to Analyze Products in Retail Transaction Databases

    Science.gov (United States)

    Yun, Unil

    Mining correlated patterns in large transaction databases is one of the essential tasks in data mining since a huge number of patterns are usually mined, but it is hard to find patterns with the correlation. The needed data analysis should be made according to the requirements of the particular real application. In previous mining approaches, patterns with the weak affinity are found even with a high minimum support. In this paper, we suggest weighted support affinity pattern mining in which a new measure, weighted support confidence (ws-confidence) is developed to identify correlated patterns with the weighted support affinity. To efficiently prune the weak affinity patterns, we prove that the ws-confidence measure satisfies the anti-monotone and cross weighted support properties which can be applied to eliminate patterns with dissimilar weighted support levels. Based on the two properties, we develop a weighted support affinity pattern mining algorithm (WSP). The weighted support affinity patterns can be useful to answer the comparative analysis queries such as finding itemsets containing items which give similar total selling expense levels with an acceptable error range α% and detecting item lists with similar levels of total profits. In addition, our performance study shows that WSP is efficient and scalable for mining weighted support affinity patterns.

  13. Basic Characteristics and Spatial Patterns of Pseudo-Settlements—Taking Dalian as An Example

    Science.gov (United States)

    Gao, Jiaji; Zhang, Yingjia; Li, Xueming

    2016-01-01

    A person’s living behavior patterns are closely related to three types of settlements: real-life settlements, imagined settlements, and pseudo-settlements. The term “pseudo-settlement” (PS) refers to the places that are selectively recorded and represented after the mass media chose and restructure the residence information. As the mass media rapidly develops and people’s way of obtaining information gradually change, PS has already become one of the main ways for people to recognize and understand real-life settlements, as well as describe their impressions of imagined settlements. PS also has a profound impact on tourism, employment, investment, migration, real estate development, etc. Thus, the study of PSs has important theoretical and practical significance. This paper proposes to put forward residential quarters where the mass media is displayed as the object of study and establishes the pseudo-settlement index system of Dalian in and elaborate analysis of the concept of PSs. From three aspects, including pseudo-buildings, pseudo-districts and pseudo-culture, this paper uses the ArcGIS 10.0 kernel density (spacial analyst) to analyze and interpret the basic characteristics and spatial patterns of 14 elements of the PS in Dalian. Through systemic clustering analysis, it identifies eight major types of PSs in Dalian. Then it systematically elaborates current situations and characteristics of the spatial pattern of PSs in Dalian, namely: regionally concentrated, widely scattered and blank spaces without pseudo-settlements. Finally, this paper discusses the mechanism of formation of PSs in Dalian. PMID:26805859

  14. Basic Characteristics and Spatial Patterns of Pseudo-Settlements—Taking Dalian as An Example

    Directory of Open Access Journals (Sweden)

    Jiaji Gao

    2016-01-01

    Full Text Available A person’s living behavior patterns are closely related to three types of settlements: real-life settlements, imagined settlements, and pseudo-settlements. The term “pseudo-settlement” (PS refers to the places that are selectively recorded and represented after the mass media chose and restructure the residence information. As the mass media rapidly develops and people’s way of obtaining information gradually change, PS has already become one of the main ways for people to recognize and understand real-life settlements, as well as describe their impressions of imagined settlements. PS also has a profound impact on tourism, employment, investment, migration, real estate development, etc. Thus, the study of PSs has important theoretical and practical significance. This paper proposes to put forward residential quarters where the mass media is displayed as the object of study and establishes the pseudo-settlement index system of Dalian in and elaborate analysis of the concept of PSs. From three aspects, including pseudo-buildings, pseudo-districts and pseudo-culture, this paper uses the ArcGIS 10.0 kernel density (spacial analyst to analyze and interpret the basic characteristics and spatial patterns of 14 elements of the PS in Dalian. Through systemic clustering analysis, it identifies eight major types of PSs in Dalian. Then it systematically elaborates current situations and characteristics of the spatial pattern of PSs in Dalian, namely: regionally concentrated, widely scattered and blank spaces without pseudo-settlements. Finally, this paper discusses the mechanism of formation of PSs in Dalian.

  15. Temporal trends and spatial patterns in nutrient export along the Mississippi River and its Tributaries

    Science.gov (United States)

    Stewart, B.; Li, L.

    2017-12-01

    The Mississippi River, the largest river in the U. S., exports excessive nutrients from the land to the sea, causing the problem of hypoxia in the Gulf of Mexico. In this research, we examined nutrient export along the Mississippi River and its tributaries to understand its trends and patterns and to identify the major factors contributing to these trends. We examined nutrient data from 1950 - 2017 for four sites along the Mississippi River and four tributary sites from the U. S. Geological Survey. The species included: total nitrogen, organic nitrogen, ammonia, nitrate, orthophosphate, and phosphorous. We analyzed the power law relationship of concentration and discharge, for which the export of nutrient species exhibited several trends. Both nitrogen (N) and phosphorous (P) species exhibited mostly chemodynamic behavior. This is in contrast to previous observations in smaller agricultural land where N and P export was mostly chemostatic with no significant change in concentration as discharge varies, suggesting possible scaling effects at different spatial scales. We also compared the average annual concentration over time at each site. The N concentration decreased from upstream to downstream, likely due to greater agricultural activities in the upstream Mississippi river and possible denitrification along the river. The N concentration also increased with time. The P species, however, fluctuated from site to site with no clear spatial patterns, but consistently exhibited higher concentrations at upstream sites with greater agricultural activities. The P species also fluctuated over time, likely due to patterns in discharge and agricultural activities. The results of this research can be further explored by calculating the total export of nutrients into the Gulf of Mexico to determine limits and drivers of nutrient export for better water management, thus helping prevent hypoxia and eutrophication within the Mississippi River basin.

  16. Spatial pattern and its changes of grain production using GIS

    Science.gov (United States)

    Wu, Jianzhai; Shen, Chen; Zhang, Jianhua; Zhou, Xiangyang; Han, Shuqing

    2018-02-01

    Aiming to provide the support for maintaining grain security in China, we discussed the spatial distribution of China’s grain production and its changes in 1980-2013 using GIS spatial analysis method based on statistics data. The results show that regional differences of food production in China is obvious, and characterized as “up in south, low in north”on the north-south direction and “low in center, high in both sides “on the east-west direction. From 1980 to 2013, the concentration degree of grain production improved, and the output significantly concentrated to the northern and central regions. The regions with the rapid increase in grain yield are almost located in the Midwest China, and the northern China has also made a significant increase.

  17. Spatial patterns of heavy metal contamination by urbanization

    Science.gov (United States)

    Delbecque, Nele; Verdoodt, Ann

    2015-04-01

    Source identification is an important step towards predictive models of urban heavy metal (HM) contamination. This study assesses the spatial distribution of enrichment of eight HMs (As, Cd, Cr, Cu, Hg, Ni, Pb and Zn) in the city of Ghent (156.18 km2; Belgium). A database with HM concentrations measured in the topsoil at 2138 point observations was collected from the Public Waste Agency of Flanders. The degree of anthropogenic HM enrichment was quantified using an urban pollution index (PI). Enrichment of HMs showed high variations throughout the study area due to manifold anthropogenic sources. Topsoil in Ghent was especially enriched with Cu, Ni, Pb and Zn, with median PI's of 1.91, 1.74, 2.12 and 2.02 respectively. Contrastingly, As, Cd, Hg, Cr generally did not exceed expected background concentrations, with median PI values agriculture, park and recreation, residential zones, harbor and industry) generally revealed high enrichment of Cu, Ni, Pb and Zn in residential areas linked to housing and traffic, but proved unsatisfactory to capture major trends in urban spatial HM distributions. Moreover, an important control of industrial and traffic emissions is suggested for Ni, Cu, Pb and Zn. Industrial non-airborne point source contaminations were mainly historical, rather than linked to current industrial activities. Results indicated that urban-rural gradients or current land use stratification approaches are inadequate to predict spatial HM distributions in cities with a long history of industrialization.

  18. The impact of spatial resolution on resolving spatial precipitation patterns in the Himalayas

    NARCIS (Netherlands)

    Bonekamp, P.N.J.; Collier, S.E.; Immerzeel, W.W.

    2017-01-01

    Frequently used gridded meteorological datasets poorly represent precipitation in the Himalaya due to their relatively low spatial resolution and the associated coarse representation of the complex topography. Dynamical downscaling using high-resolution atmospheric models may improve the accuracy

  19. The impact of spatial resolution on resolving spatial precipitation patterns in the Himalayas

    OpenAIRE

    Bonekamp, P.N.J.; Collier, S.E.; Immerzeel, W.W.

    2017-01-01

    Frequently used gridded meteorological datasets poorly represent precipitation in the Himalaya due to their relatively low spatial resolution and the associated coarse representation of the complex topography. Dynamical downscaling using high-resolution atmospheric models may improve the accuracy and quality of the precipitation fields, as simulations at higher spatial resolution are more capable of resolving the interaction between the topography and the atmosphere. However, most physics par...

  20. Spatial Pattern Determination of Biodiversity Threats at Landscape Level (Case Study: Golestan Province)

    OpenAIRE

    R. Mirzaei; A. Esmaili-Sari; M. R. Hemami; H. R. Rezaei

    2015-01-01

    Mapping spatial patterns of potential biodiversity threats is one of the important steps for effective conservation planning and activities. To determine the spatial patterns of threats in Golestan province, 12 criteria in four main groups including structural (fractal coefficient of perimeter, circularity ratio of area, average slope), compositional aspects of biodiversity (presence of species at risk), non-biological threats (distance to city, distance to village, distance to road, distance...

  1. Examining Spatiotemporal Urbanization Patterns in Kathmandu Valley, Nepal: Remote Sensing and Spatial Metrics Approaches

    OpenAIRE

    Thapa, Rajesh Bahadur; Murayama, Yuji

    2009-01-01

    This paper examines the spatiotemporal pattern of urbanization in Kathmandu Valley using remote sensing and spatial metrics techniques. The study is based on 33-years of time series data compiled from satellite images. Along with new developments within the city fringes and rural villages in the valley, shifts in the natural environment and newly developed socioeconomic strains between residents are emerging. A highly dynamic spatial pattern of urbanization is observed in the valley. Urban bu...

  2. MODELING SPATIAL TREE PATTERNS IN THE TAPAJÓS FOREST USING INTERFEROMETRIC HEIGHT

    Directory of Open Access Journals (Sweden)

    João R. dos Santos

    2005-04-01

    Full Text Available The spatial distribution of very large trees in primary Amazon forest is extracted from a digital model of interferometric forest height by an approach of local maximum filtering. The spatial point patterns of very large trees are modeled by a series of Markov point process models. Spatial distribution is regular, and interaction decreases with distance; very large trees are shown to exert repulsive interaction with their neighboring very large trees.

  3. Macroecological factors shape local-scale spatial patterns in agriculturalist settlements.

    Science.gov (United States)

    Tao, Tingting; Abades, Sebastián; Teng, Shuqing; Huang, Zheng Y X; Reino, Luís; Chen, Bin J W; Zhang, Yong; Xu, Chi; Svenning, Jens-Christian

    2017-11-15

    Macro-scale patterns of human systems ranging from population distribution to linguistic diversity have attracted recent attention, giving rise to the suggestion that macroecological rules shape the assembly of human societies. However, in which aspects the geography of our own species is shaped by macroecological factors remains poorly understood. Here, we provide a first demonstration that macroecological factors shape strong local-scale spatial patterns in human settlement systems, through an analysis of spatial patterns in agriculturalist settlements in eastern mainland China based on high-resolution Google Earth images. We used spatial point pattern analysis to show that settlement spatial patterns are characterized by over-dispersion at fine spatial scales (0.05-1.4 km), consistent with territory segregation, and clumping at coarser spatial scales beyond the over-dispersion signals, indicating territorial clustering. Statistical modelling shows that, at macroscales, potential evapotranspiration and topographic heterogeneity have negative effects on territory size, but positive effects on territorial clustering. These relationships are in line with predictions from territory theory for hunter-gatherers as well as for many animal species. Our results help to disentangle the complex interactions between intrinsic spatial processes in agriculturalist societies and external forcing by macroecological factors. While one may speculate that humans can escape ecological constraints because of unique abilities for environmental modification and globalized resource transportation, our work highlights that universal macroecological principles still shape the geography of current human agricultural societies. © 2017 The Author(s).

  4. Moving beyond abundance distributions: neutral theory and spatial patterns in a tropical forest.

    Science.gov (United States)

    May, Felix; Huth, Andreas; Wiegand, Thorsten

    2015-03-07

    Assessing the relative importance of different processes that determine the spatial distribution of species and the dynamics in highly diverse plant communities remains a challenging question in ecology. Previous modelling approaches often focused on single aggregated forest diversity patterns that convey limited information on the underlying dynamic processes. Here, we use recent advances in inference for stochastic simulation models to evaluate the ability of a spatially explicit and spatially continuous neutral model to quantitatively predict six spatial and non-spatial patterns observed at the 50 ha tropical forest plot on Barro Colorado Island, Panama. The patterns capture different aspects of forest dynamics and biodiversity structure, such as annual mortality rate, species richness, species abundance distribution, beta-diversity and the species-area relationship (SAR). The model correctly predicted each pattern independently and up to five patterns simultaneously. However, the model was unable to match the SAR and beta-diversity simultaneously. Our study moves previous theory towards a dynamic spatial theory of biodiversity and demonstrates the value of spatial data to identify ecological processes. This opens up new avenues to evaluate the consequences of additional process for community assembly and dynamics.

  5. Pattern and spatial distribution of plague in Lushoto, north-eastern ...

    African Journals Online (AJOL)

    A review of plague records from 1986 to 2002 and household interviews were carried out in the plague endemic villages to establish a pattern and spatial distribution of the disease in Lushoto district, Tanzania. Spatial data of households and village centres were collected and mapped using a hand held Global Positioning ...

  6. First insights on spatial and temporal distribution patterns of ...

    African Journals Online (AJOL)

    Our findings will be useful for the development of strategic sustained management plans by providing baseline information on humpback whale distribution at an important but poorly documented breeding site. Keywords: habitat use, Indian Ocean, Megaptera novaeangliae, phenology, seasonality pattern, social groups ...

  7. Spatial patterns in Mastomys natalensis in Tanzania (Rodentia, Muridae)

    DEFF Research Database (Denmark)

    Leirs, Herwig; Verheyen, Walter; Verhagen, Ron

    1996-01-01

    We investigated habitat preference, dispersal and movement patterns of Mastomys natalensis in fallow land and maize fields in Tanzania. During periods of low densities, the animals seemed to avoid open spaces and were concentrated in areas with rich vegetation cover. A high turn-over rate, even i...

  8. Bistability and regular spatial patterns in arid ecosystems.

    NARCIS (Netherlands)

    Kéfi, S.; Eppinga, M.B.; Ruiter, de P.C.; Rietkerk, M.

    2010-01-01

    A variety of patterns observed in ecosystems can be explained by resource–concentration mechanisms. A resource–concentration mechanism occurs when organisms increase the lateral flow of a resource toward them, leading to a local concentration of this resource and to its depletion from areas farther

  9. Spatial dependence of polycrystalline FTO’s conductance analyzed by conductive atomic force microscope (C-AFM)

    Energy Technology Data Exchange (ETDEWEB)

    Peixoto, Alexandre Pessoa; Costa, J. C. da [Department of Electrical Engineering, University of Brasília, Campus Universitário Darcy Ribeiro, Asa Norte, PO Box 4386, Brasília - DF, 70919-970 (Brazil)

    2014-05-15

    Fluorine-doped Tin oxide (FTO) is a highly transparent, electrically conductive polycrystalline material frequently used as an electrode in organic solar cells and optical-electronic devices [1–2]. In this work a spatial analysis of the conductive behavior of FTO was carried out by Conductive-mode Atomic Force Microscopy (C-AFM). Rare highly oriented grains sample give us an opportunity to analyze the top portion of polycrystalline FTO and compare with the border one. It is shown that the current flow essentially takes place through the polycrystalline edge at grain boundaries.

  10. The spatial patterns of beta/A4 deposit subtypes in Down's syndrome.

    Science.gov (United States)

    Amstrong, R A

    1994-01-01

    The spatial patterns of diffuse, primitive and classic beta/A4 deposits were studied in coronal sections of the hippocampus and adjacent gyri in 11 cases of Down's syndrome (DS) varying in age from 38 to 67 years. The objectives of the study were first, to compare the spatial patterns of beta/A4 deposits revealed in DS with those reported in cases of Alzheimer's disease (AD) and second, to study how the spatial patterns of beta/A4 deposits may develop in the tissue. The spatial patterns revealed in DS exhibited a number of similarities with those reported in AD: (1) the range and frequency of the different types of spatial pattern revealed were similar, (2) beta/A4 deposits occurred in clusters and in many cortical tissues, the clusters were distributed in a regular pattern parallel to the pia, (3) the clusters of diffuse and primitive beta/A4 deposits occurred in an alternating pattern along the cortex, and (4) the clusters of classic beta/A4 deposits were not correlated with the clusters of the diffuse and primitive deposits. Primitive deposits may develop from the diffuse deposits in regions of the cortex where extracellular paired helical filaments were formed. However, clusters of the classic beta/A4 deposits, which are formed in older cases, appear to develop independently of the diffuse and primitive deposits.

  11. Spatial and demographic patterns of Cholera in Ashanti region - Ghana

    Directory of Open Access Journals (Sweden)

    Duker Alfred A

    2008-08-01

    Full Text Available Abstract Background Cholera has claimed many lives throughout history and it continues to be a global threat, especially in countries in Africa. The disease is listed as one of three internationally quarantinable diseases by the World Health organization, along with plague and yellow fever. Between 1999 and 2005, Africa alone accounted for about 90% of over 1 million reported cholera cases worldwide. In Ghana, there have been over 27000 reported cases since 1999. In one of the affected regions in Ghana, Ashanti region, massive outbreaks and high incidences of cholera have predominated in urban and overcrowded communities. Results A GIS based spatial analysis and statistical analysis, carried out to determine clustering of cholera, showed that high cholera rates are clustered around Kumasi Metropolis (the central part of the region, with Moran's Index = 0.271 and P Chi square for trend analysis reflected a direct spatial relationship between cholera and urbanization (χ2 = 2995.5, P χ2 = 1757.2, P χ2 = 831.38, P Conclusion The results suggest that high urbanization, high overcrowding, and neighborhood with Kumasi Metropolis are the most important predictors of cholera in Ashanti region.

  12. An Application of Sq Variation Spatial Patterns on Diurnal Variation Correction in Marine Magnetic Survey

    Science.gov (United States)

    Pan, X.; Yao, C.; Zheng, Y.; Li, Z.

    2017-12-01

    In the case of marine magnetic survey, especially in remote sea, it is hard to set a base-station (magnetometers in buoys or seabed) recording temporal variations of geomagnetic field simultaneously for diurnal variation correction. Available methods make numerical calculation, such as geographical interpolation and weighted average, by using simultaneous observations in land to get these inaccessible variations. However, as a result of ignoring the underlying physical mechanism, these numerical methods are always with substantial errors and limited applicable in sea area close to land. On the other hand, solar-quiet (Sq) daily variation, the main part of diurnal variation, is known to be generated by Sq current system in the E-region of ionosphere and has significant spatial patterns. On this basis, we collected massive geomagnetic data from geomagnetic observatories in China and got applicable patterns by analyzing Sq variations extracted from these data. The difference between the Sq variation curves of two stations in north and south side of Sq current respectively is Gaussian distributed over time. Taking this pattern into account, we choose Sq variation curve of the most south station as a base curve and fitted differences between curves of other stations and it by Gaussian functions. Then, an empirical model of latitude and longitude is obtained by regression analyzed coefficients of those Gaussian functions. After putting latitude and longitude of a position into this empirical model and adding the result curve to base curve, a Sq variation prediction of this position is achieved. The test result of this new method is much better than those numerical methods above: in the mid-low latitude, the prediction is effective in a much wider range of 20 degrees longitude and with remarkable lower errors.

  13. Spatial point pattern analysis of human settlements and geographical associations in eastern coastal China - a case study.

    Science.gov (United States)

    Zhang, Zhonghao; Xiao, Rui; Shortridge, Ashton; Wu, Jiaping

    2014-03-10

    Understanding the spatial point pattern of human settlements and their geographical associations are important for understanding the drivers of land use and land cover change and the relationship between environmental and ecological processes on one hand and cultures and lifestyles on the other. In this study, a Geographic Information System (GIS) approach, Ripley's K function and Monte Carlo simulation were used to investigate human settlement point patterns. Remotely sensed tools and regression models were employed to identify the effects of geographical determinants on settlement locations in the Wen-Tai region of eastern coastal China. Results indicated that human settlements displayed regular-random-cluster patterns from small to big scale. Most settlements located on the coastal plain presented either regular or random patterns, while those in hilly areas exhibited a clustered pattern. Moreover, clustered settlements were preferentially located at higher elevations with steeper slopes and south facing aspects than random or regular settlements. Regression showed that influences of topographic factors (elevation, slope and aspect) on settlement locations were stronger across hilly regions. This study demonstrated a new approach to analyzing the spatial patterns of human settlements from a wide geographical prospective. We argue that the spatial point patterns of settlements, in addition to the characteristics of human settlements, such as area, density and shape, should be taken into consideration in the future, and land planners and decision makers should pay more attention to city planning and management. Conceptual and methodological bridges linking settlement patterns to regional and site-specific geographical characteristics will be a key to human settlement studies and planning.

  14. Spatial Point Pattern Analysis of Human Settlements and Geographical Associations in Eastern Coastal China — A Case Study

    Science.gov (United States)

    Zhang, Zhonghao; Xiao, Rui; Shortridge, Ashton; Wu, Jiaping

    2014-01-01

    Understanding the spatial point pattern of human settlements and their geographical associations are important for understanding the drivers of land use and land cover change and the relationship between environmental and ecological processes on one hand and cultures and lifestyles on the other. In this study, a Geographic Information System (GIS) approach, Ripley’s K function and Monte Carlo simulation were used to investigate human settlement point patterns. Remotely sensed tools and regression models were employed to identify the effects of geographical determinants on settlement locations in the Wen-Tai region of eastern coastal China. Results indicated that human settlements displayed regular-random-cluster patterns from small to big scale. Most settlements located on the coastal plain presented either regular or random patterns, while those in hilly areas exhibited a clustered pattern. Moreover, clustered settlements were preferentially located at higher elevations with steeper slopes and south facing aspects than random or regular settlements. Regression showed that influences of topographic factors (elevation, slope and aspect) on settlement locations were stronger across hilly regions. This study demonstrated a new approach to analyzing the spatial patterns of human settlements from a wide geographical prospective. We argue that the spatial point patterns of settlements, in addition to the characteristics of human settlements, such as area, density and shape, should be taken into consideration in the future, and land planners and decision makers should pay more attention to city planning and management. Conceptual and methodological bridges linking settlement patterns to regional and site-specific geographical characteristics will be a key to human settlement studies and planning. PMID:24619117

  15. Spatial Point Pattern Analysis of Human Settlements and Geographical Associations in Eastern Coastal China — A Case Study

    Directory of Open Access Journals (Sweden)

    Zhonghao Zhang

    2014-03-01

    Full Text Available Understanding the spatial point pattern of human settlements and their geographical associations are important for understanding the drivers of land use and land cover change and the relationship between environmental and ecological processes on one hand and cultures and lifestyles on the other. In this study, a Geographic Information System (GIS approach, Ripley’s K function and Monte Carlo simulation were used to investigate human settlement point patterns. Remotely sensed tools and regression models were employed to identify the effects of geographical determinants on settlement locations in the Wen-Tai region of eastern coastal China. Results indicated that human settlements displayed regular-random-cluster patterns from small to big scale. Most settlements located on the coastal plain presented either regular or random patterns, while those in hilly areas exhibited a clustered pattern. Moreover, clustered settlements were preferentially located at higher elevations with steeper slopes and south facing aspects than random or regular settlements. Regression showed that influences of topographic factors (elevation, slope and aspect on settlement locations were stronger across hilly regions. This study demonstrated a new approach to analyzing the spatial patterns of human settlements from a wide geographical prospective. We argue that the spatial point patterns of settlements, in addition to the characteristics of human settlements, such as area, density and shape, should be taken into consideration in the future, and land planners and decision makers should pay more attention to city planning and management. Conceptual and methodological bridges linking settlement patterns to regional and site-specific geographical characteristics will be a key to human settlement studies and planning.

  16. Testing the spatial significance of weed patterns in arable land using Mead's test

    NARCIS (Netherlands)

    Heijting, S.; Werf, van der W.; Kruijer, W.T.; Stein, A.

    2007-01-01

    There is a need in weed science for statistical tests for patchiness and spatial pattern. The objective of this study was to investigate the performance of Mead¿s test for detecting patterns in synthetic data and in real weed counts made in maize, and making a first assessment of its applicability

  17. Testing the spatial significance of weed patterns in arable land using Mead's test

    NARCIS (Netherlands)

    Heijting, S.; van der Werf, W.; Kruijer, W.T.; Stein, A.

    2007-01-01

    There is a need in weed science for statistical tests for patchiness and spatial pattern. The objective of this study was to investigate the performance of Mead's test for detecting patterns in synthetic data and in real weed counts made in maize, and making a first assessment of its applicability

  18. Phase separation explains a new class of self-organized spatial patterns in ecological systems

    NARCIS (Netherlands)

    Liu, Q.X.; Doelman, A.; Rottschäfer, V.; de Jager, M.; Herman, P.M.J.; Rietkerk, M.; van de Koppel, J.

    2013-01-01

    The origin of regular spatial patterns in ecological systems has long fascinated researchers. Turing's activator-inhibitor principle is considered the central paradigm to explain such patterns. According to this principle, local activation combined with long-range inhibition of growth and survival

  19. Long-term mortality rates and spatial patterns in an old-growth forest

    Science.gov (United States)

    Emily J. Silver; Shawn Fraver; Anthony W. D' Amato; Tuomas Aakala; Brian J. Palik

    2013-01-01

    Understanding natural mortality patterns and processes of forest tree species is increasingly important given projected changes in mortality owing to global change. With this need in mind, the rate and spatial pattern of mortality was assessed over an 89-year period in a natural-origin Pinus resinosa (Aiton)-dominated system to assess these processes...

  20. Evolution of Canada’s Boreal Forest Spatial Patterns as Seen from Space

    Science.gov (United States)

    Pickell, Paul D.; Coops, Nicholas C.; Gergel, Sarah E.; Andison, David W.; Marshall, Peter L.

    2016-01-01

    Understanding the development of landscape patterns over broad spatial and temporal scales is a major contribution to ecological sciences and is a critical area of research for forested land management. Boreal forests represent an excellent case study for such research because these forests have undergone significant changes over recent decades. We analyzed the temporal trends of four widely-used landscape pattern indices for boreal forests of Canada: forest cover, largest forest patch index, forest edge density, and core (interior) forest cover. The indices were computed over landscape extents ranging from 5,000 ha (n = 18,185) to 50,000 ha (n = 1,662) and across nine major ecozones of Canada. We used 26 years of Landsat satellite imagery to derive annualized trends of the landscape pattern indices. The largest declines in forest cover, largest forest patch index, and core forest cover were observed in the Boreal Shield, Boreal Plain, and Boreal Cordillera ecozones. Forest edge density increased at all landscape extents for all ecozones. Rapidly changing landscapes, defined as the 90th percentile of forest cover change, were among the most forested initially and were characterized by four times greater decrease in largest forest patch index, three times greater increase in forest edge density, and four times greater decrease in core forest cover compared with all 50,000 ha landscapes. Moreover, approximately 18% of all 50,000 ha landscapes did not change due to a lack of disturbance. The pattern database results provide important context for forest management agencies committed to implementing ecosystem-based management strategies. PMID:27383055

  1. Crop yield response to climate change varies with crop spatial distribution pattern.

    Science.gov (United States)

    Leng, Guoyong; Huang, Maoyi

    2017-05-03

    The linkage between crop yield and climate variability has been confirmed in numerous studies using statistical approaches. A crucial assumption in these studies is that crop spatial distribution pattern is constant over time. Here, we explore how changes in county-level corn spatial distribution pattern modulate the response of its yields to climate change at the state level over the Contiguous United States. Our results show that corn yield response to climate change varies with crop spatial distribution pattern, with distinct impacts on the magnitude and even the direction at the state level. Corn yield is predicted to decrease by 20~40% by 2050 s when considering crop spatial distribution pattern changes, which is 6~12% less than the estimates with fixed cropping pattern. The beneficial effects are mainly achieved by reducing the negative impacts of daily maximum temperature and strengthening the positive impacts of precipitation. Our results indicate that previous empirical studies could be biased in assessing climate change impacts by ignoring the changes in crop spatial distribution pattern. This has great implications for understanding the increasing debates on whether climate change will be a net gain or loss for regional agriculture.

  2. Fragmentation patterns of evergreen oak woodlands in Southwestern Iberia: identifying key spatial indicators.

    Science.gov (United States)

    Costa, Augusta; Madeira, Manuel; Lima Santos, José; Plieninger, Tobias; Seixas, Júlia

    2014-01-15

    Mediterranean evergreen oak woodlands (composed of Quercus suber L. and Quercus rotundifolia Lam.) are becoming increasingly fragmented in the human-modified landscapes of Southwestern Portugal and Spain. Previous studies have largely neglected to assess the spatial changes of oak woodlands in relation to their surrounding landscape matrix, and to characterize and quantify woodland boundaries and edges. The present study aims to fill this gap by analyzing fragmentation patterns of oak woodlands over a 50-year period (1958-2007) in three landscapes. Using archived aerial imagery from 1958, 1995 and 2007, for two consecutive periods (1958-1995 and 1995-2007), we calculated a set of landscape metrics to compare woodland fragmentation over time. Our results indicated a continuous woodland fragmentation characterized by their edge dynamics. From 1958 to 2007, the replacement of open farmland by shrubland and by new afforestation areas in the oak woodland landscape surrounding matrix, led to the highest values for edge contrast length trends of 5.0 and 12.3, respectively. Linear discriminant analysis was performed to delineate fragmented woodland structures and identify metric variables that characterize woodland spatial configuration. The edge contrast length with open farmland showed a strong correlation with F1 (correlations ranging between 0.55 and 0.98) and may be used as a proxy for oak woodland mixedness in landscape matrix. The edge dynamics of oak woodlands may result in different patterns of oak recruitment and therefore, its study may be helpful in highlighting future baselines for the sustainable management of oak woodlands. Copyright © 2013 Elsevier Ltd. All rights reserved.

  3. [Spatial pattern analysis and associations of Quercus aquifolioides population at different growth stages in Southeast Tibet, China].

    Science.gov (United States)

    Shen, Zhi-qiang; Hua, Min; Dan, Qu; Lu, Jie; Fang, Jiang-ping

    2016-02-01

    This article analyzed the spatial pattern and its correlation of Quercus aquifolioides, Southeast Tibet at different growing stages by using Ripley' s L function in the method of point pattern, analysis. The results showed the diameter structure of Q. aquifolioides population in Southeast Tibet followed a 'single peak' shape and the saplings and medium trees predominated in number in the whole population. The population had a high regeneration rate and was of increase type. In the growth process of Q. aquifolioides from saplings to large trees, saplings and medium trees showed aggregation distribution at.small scale, while large trees showed basically random distribution at whole scale. There was significant correlation between saplings with medium or large trees at small scale, however, there was no correlation between medium and large trees. In the growth process of Q. aquifolioides population from saplings, medium trees to large trees, its spatial pattern developed from aggregative distribution to random distribution. The natural regeneration of Q. aquifolioides population was affected not only by interspecific competition, but also by intraspecific competition. In the similar natural environment, the most important factors affecting the spatial pattern of Q. aquifoioides population were its own biological and ecological characteristics.

  4. Spatial pattern formation and intraspecific competition of anabasis aphylla l. population in the diluvial fan of junggar basin, nw china

    International Nuclear Information System (INIS)

    Wang, M.; Li, Y.Y.; Niu, P.X.

    2015-01-01

    Using conventional nearest neighbour analysis and Ripley's L-function, the goal of this study was to analyze spatial patterns of Anabasis aphylla plants in order to investigate underlying competitive processes that shape the population spatial structure from diluvial fan in Junggar Basin, NW China. We found that the spatial patterns of all growth stages were aggregated in the three study plots, and seedling and juvenile plants were more aggregated than expected by chance. Positive associations among growth stages of A. aphylla population were found at a small scale while negative associations of seedling and juvenile relative to adult plants were shown at a larger scale. The processes such as dispersal, seedling establishment, environmental heterogeneity, plant interactions and disturbance may have acted individually or in concert with other processes to produce the aggregated patterns and competitive relationship. Moreover, these findings suggested that the aggregated distribution and the competitive interaction between A. aphylla plants in the diluvial fan reflected not only in mortality, but also in decreased performance (smaller canopy) that was an important characteristic of drought-enduring plant, thus preventing a regular distribution pattern. (author)

  5. Temporal and spatial patterns of suicides in Stockholm's subway stations.

    Science.gov (United States)

    Uittenbogaard, Adriaan; Ceccato, Vania

    2015-08-01

    This paper investigates the potential temporal and spatial variations of suicides in subway stations in Stockholm, Sweden. The study also assesses whether the variation in suicide rates is related to the station environments by controlling for each station's location and a number of contextual factors using regression models and geographical information systems (GIS). Data on accidents are used as references for the analysis of suicides. Findings show that suicides tend to occur during the day and in the spring. They are concentrated in the main transportation hubs but, interestingly, during off-peak hours. However, the highest rates of suicides per passenger are found in Stockholm's subway stations located in the Southern outskirts. More than half of the variation in suicide rates is associated with stations that have walls between the two sides of the platform but still allow some visibility from passers-by. The surrounding environment and socioeconomic context show little effect on suicide rates, but stations embedded in areas with high drug-related crime rates tend to show higher suicide rates. Copyright © 2015 Elsevier Ltd. All rights reserved.

  6. Natural Human Mobility Patterns and Spatial Spread of Infectious Diseases

    Directory of Open Access Journals (Sweden)

    Vitaly Belik

    2011-08-01

    Full Text Available We investigate a model for spatial epidemics explicitly taking into account bidirectional movements between base and destination locations on individual mobility networks. We provide a systematic analysis of generic dynamical features of the model on regular and complex metapopulation network topologies and show that significant dynamical differences exist to ordinary reaction-diffusion and effective force of infection models. On a lattice we calculate an expression for the velocity of the propagating epidemic front and find that, in contrast to the diffusive systems, our model predicts a saturation of the velocity with an increasing traveling rate. Furthermore, we show that a fully stochastic system exhibits a novel threshold for the attack ratio of an outbreak that is absent in diffusion and force of infection models. These insights not only capture natural features of human mobility relevant for the geographical epidemic spread, they may serve as a starting point for modeling important dynamical processes in human and animal epidemiology, population ecology, biology, and evolution.

  7. Can inducible resistance in plants cause herbivore aggregations? Spatial patterns in an inducible plant/herbivore model

    OpenAIRE

    Anderson, KE; Inouye, BD; Underwood, N

    2015-01-01

    © 2015 by the Ecological Society of America. Many theories regarding the evolution of inducible resistance in plants have an implicit spatial component, but most relevant population dynamic studies ignore spatial dynamics. We examined a spatially explicit model of plant inducible resistance and herbivore population dynamics to explore how realistic features of resistance and herbivore responses influence spatial patterning. Both transient and persistent spatial patterns developed in all model...

  8. Quantifying spatial and temporal patterns of flow intermittency using spatially contiguous runoff data

    Science.gov (United States)

    Yu (于松延), Songyan; Bond, Nick R.; Bunn, Stuart E.; Xu, Zongxue; Kennard, Mark J.

    2018-04-01

    River channel drying caused by intermittent stream flow is a widely-recognized factor shaping stream ecosystems. There is a strong need to quantify the distribution of intermittent streams across catchments to inform management. However, observational gauge networks provide only point estimates of streamflow variation. Increasingly, this limitation is being overcome through the use of spatially contiguous estimates of the terrestrial water-balance, which can also assist in estimating runoff and streamflow at large-spatial scales. Here we proposed an approach to quantifying spatial and temporal variation in monthly flow intermittency throughout river networks in eastern Australia. We aggregated gridded (5 × 5 km) monthly water-balance data with a hierarchically nested catchment dataset to simulate catchment runoff accumulation throughout river networks from 1900 to 2016. We also predicted zero flow duration for the entire river network by developing a robust predictive model relating measured zero flow duration (% months) to environmental predictor variables (based on 43 stream gauges). We then combined these datasets by using the predicted zero flow duration from the regression model to determine appropriate 'zero' flow thresholds for the modelled discharge data, which varied spatially across the catchments examined. Finally, based on modelled discharge data and identified actual zero flow thresholds, we derived summary metrics describing flow intermittency across the catchment (mean flow duration and coefficient-of-variation in flow permanence from 1900 to 2016). We also classified the relative degree of flow intermittency annually to characterise temporal variation in flow intermittency. Results showed that the degree of flow intermittency varied substantially across streams in eastern Australia, ranging from perennial streams flowing permanently (11-12 months) to strongly intermittent streams flowing 4 months or less of year. Results also showed that the

  9. Social, Spatial and Legislative Strategy to Shift Urban Mobility Patterns

    Science.gov (United States)

    Branea, Ana-Maria; Gaman, Marius; Badescu, Stefana

    2017-10-01

    A city’s predominant transportation mode is crucial in determining its type of urban tissue. A denser and more compact urban development is generated through pedestrian, bicycle and public transit while car based developments tend to be dispersed, characterized by unsustainable low densities. However, a clear implementation strategy eludes many urban planning practitioners and public administrations, thus highlighting the need for further research. Following an international trend, Timisoara’s mobility strategy over the past two decades, has been to accommodate an ever-increasing number of vehicles on its underdeveloped infrastructure at the expense of green areas, pedestrian lanes and even travel-turned-parking lanes. Despite the latest, slight, shift towards inner city urban development only 11% of the proposed Urban Mobility Strategy’s policies are not centred on cars. Through a 15 criteria analysis of the main means of transportation, pedestrian, bicycle, public transit and car, the authors determined the most sustainable and efficient mode based on the distance - duration relationship as being bicycles, for a city of Timisoara’s size and characteristics. Yet, the city’s infrastructure scored poorly on safety and comfort due to its incoherence and numerous dysfunctionalities. To better illustrate and understand Timisoara’s current state and proposed mobility strategy, the authors undertook a comparative analysis of Timisoara’s and Utrecht’s bike lane infrastructure. Similarities in size and number of inhabitants were only secondary selection criteria compared to Utrecht’s aspiring to model status. The aim of this study is to present the long term, multi-tier implementation strategy proposed to reorient Timisoara’s urban development towards a more compact, sustainable typology. Comprising social-educational, spatial and legislative objectives the strategy aspires to modify local behaviour towards and perception of alternative modes of

  10. The phase interrogation method for optical fiber sensor by analyzing the fork interference pattern

    Science.gov (United States)

    Lv, Riqing; Qiu, Liqiang; Hu, Haifeng; Meng, Lu; Zhang, Yong

    2018-02-01

    The phase interrogation method for optical fiber sensor is proposed based on the fork interference pattern between the orbital angular momentum beam and plane wave. The variation of interference pattern with phase difference between the two light beams is investigated to realize the phase interrogation. By employing principal component analysis method, the features of the interference pattern can be extracted. Moreover, the experimental system is designed to verify the theoretical analysis, as well as feasibility of phase interrogation. In this work, the Mach-Zehnder interferometer was employed to convert the strain applied on sensing fiber to the phase difference between the reference and measuring paths. This interrogation method is also applicable for the measurements of other physical parameters, which can produce the phase delay in optical fiber. The performance of the system can be further improved by employing highlysensitive materials and fiber structures.

  11. Spatial pattern of 2009 dengue distribution in Kuala Lumpur using GIS application.

    Science.gov (United States)

    Aziz, S; Ngui, R; Lim, Y A L; Sholehah, I; Nur Farhana, J; Azizan, A S; Wan Yusoff, W S

    2012-03-01

    In the last few years in Malaysia, dengue fever has increased dramatically and has caused huge public health concerns. The present study aimed to establish a spatial distribution of dengue cases in the city of Kuala Lumpur using a combination of Geographic Information System (GIS) and spatial statistical tools. Collation of data from 1,618 dengue cases in 2009 was obtained from Kuala Lumpur City Hall (DBKL). These data were processed and then converted into GIS format. Information on the average monthly rainfall was also used to correlate with the distribution pattern of dengue cases. To asses the spatial distribution of dengue cases, Average Nearest Neighbor (ANN) Analysis was applied together with spatial analysis with the ESRI ArcGIS V9.3 programme. Results indicated that the distribution of dengue cases in Kuala Lumpur for the year 2009 was spatially clustered with R value less than 1 (R = 0.42; z-scores = - 4.47; p 1) between August and November. In addition, the mean monthly rainfall has not influenced the distribution pattern of the dengue cases. Implementation of control measures is more difficult for dispersed pattern compared to clustered pattern. From this study, it was found that distribution pattern of dengue cases in Kuala Lumpur in 2009 was spatially distributed (dispersed or clustered) rather than cases occurring randomly. It was proven that by using GIS and spatial statistic tools, we can determine the spatial distribution between dengue and population. Utilization of GIS tools is vital in assisting health agencies, epidemiologist, public health officer, town planner and relevant authorities in developing efficient control measures and contingency programmes to effectively combat dengue fever.

  12. Measuring spatial patterns in floodplains: A step towards understanding the complexity of floodplain ecosystems: Chapter 6

    Science.gov (United States)

    Scown, Murray W.; Thoms, Martin C.; DeJager, Nathan R.; Gilvear, David J.; Greenwood, Malcolm T.; Thoms, Martin C.; Wood, Paul J.

    2016-01-01

    Floodplains can be viewed as complex adaptive systems (Levin, 1998) because they are comprised of many different biophysical components, such as morphological features, soil groups and vegetation communities as well as being sites of key biogeochemical processing (Stanford et al., 2005). Interactions and feedbacks among the biophysical components often result in additional phenomena occuring over a range of scales, often in the absence of any controlling factors (sensu Hallet, 1990). This emergence of new biophysical features and rates of processing can lead to alternative stable states which feed back into floodplain adaptive cycles (cf. Hughes, 1997; Stanford et al., 2005). Interactions between different biophysical components, feedbacks, self emergence and scale are all key properties of complex adaptive systems (Levin, 1998; Phillips, 2003; Murray et al., 2014) and therefore will influence the manner in which we study and view spatial patterns. Measuring the spatial patterns of floodplain biophysical components is a prerequisite to examining and understanding these ecosystems as complex adaptive systems. Elucidating relationships between pattern and process, which are intrinsically linked within floodplains (Ward et al., 2002), is dependent upon an understanding of spatial pattern. This knowledge can help river scientists determine the major drivers, controllers and responses of floodplain structure and function, as well as the consequences of altering those drivers and controllers (Hughes and Cass, 1997; Whited et al., 2007). Interactions and feedbacks between physical, chemical and biological components of floodplain ecosystems create and maintain a structurally diverse and dynamic template (Stanford et al., 2005). This template influences subsequent interactions between components that consequently affect system trajectories within floodplains (sensu Bak et al., 1988). Constructing and evaluating models used to predict floodplain ecosystem responses to

  13. Fragility of estimated spatial temperature patterns in climate field reconstructions of the Common Era

    Science.gov (United States)

    Wang, J.; Emile-Geay, J.; Vaccaro, A.; Guillot, D.; Rajaratnam, B.

    2013-12-01

    Climate field reconstructions (CFRs) of the Common Era can provide insight into dynamical causes of low-frequency climate variability. For instance, the Mann et al. [2009] study found that the reconstructed sea-surface temperature difference between the Medieval Climate Anomaly and the Little Ice Age (hereinafter MCA - LIA) is marked by a La-Niña like pattern over the tropical Pacific, and proposed dynamical explanations for this observation. In this talk, we assess the robustness of such spatial patterns. First we examine the impact of the CFR methodology. Starting with the network of Mann et al. [2008] (hereinafter M08), we perform temperature reconstruction using four different CFR techniques: RegEM-TTLS [Schneider, 2001], the Mann et al. [2009] implementation of RegEM-TTLS (hereinafter M09), Canonical Correlation Analysis [Smerdon et al., 2010, CCA] and GraphEM [Guillot et al., in revision]. We find that results are greatly method-dependent even with identical inputs. While the M09 reconstruction displays a La Niña-like pattern over the tropical Pacific for MCA - LIA, CCA gives a neutral pattern, RegEM-TTLS and GraphEM both display El Niño-like pattern but show different amplitudes. Next we assess a given CFR technique's sensitivity to the selection of inputs. Proxies are selected based on the statistical significance of their correlations with HadCRUT3v annual temperature. A multiple hypothesis test [Ventura et al., 2004] is conducted to preclude spurious correlations. This choice has a large impact on resulting CFRs. In particular, whether the correlation is calculated between local or regional temperature-proxy pairs determines the number of significant records included in the proxy network. This in turn greatly affects the reconstructed spatial patterns and the Northern Hemispheric mean temperature time series with all CFR methods investigated. In order to further analyze CFRs' sensitivities to the abovementioned procedural choices, we assemble an

  14. Dynamic spatial pattern formation in the sea urchin embryo.

    Science.gov (United States)

    Riaz, Syed Shahed; Mackey, Michael C

    2014-02-01

    The spatiotemporal evolution of various proteins during the endo-mesodermal specification of the sea urchin embryo in the form of an expanding torus has been known experimentally for some time, and the regulatory network that controls this dynamic evolution of gene expression has been recently partially clarified. In this paper we construct a relatively simple mathematical model of this process that retains the basic features of the gene network and is able to reproduce the spatiotemporal patterns observed experimentally. We show here that a mathematical model based only on the gene-protein interactions so far reported in the literature predicts the origin of the behaviour to lie on a delayed negative feed-back loop due to the protein Blimp1 on the transcription of its corresponding mRNA. However though consistent with earlier results, this contradicts recent findings, where it has been established that the dynamical evolution of Wnt8 protein is independent of Blimp1. This leads us to offer a modified version of the original model based on observations in similar systems, and some more recent work in the sea urchin, assuming the existence of a mechanism involving inhibitory loop on wnt8 transcription. This hypothesis leads to a better match with the experimental results and suggests that the possibility of the existence of such an interaction in the sea urchin should be explored.

  15. The effects of biome and spatial scale on the Co-occurrence patterns of a group of Namibian beetles

    Science.gov (United States)

    Pitzalis, Monica; Montalto, Francesca; Amore, Valentina; Luiselli, Luca; Bologna, Marco A.

    2017-08-01

    Co-occurrence patterns (studied by C-score, number of checkerboard units, number of species combinations, and V-ratio, and by an empirical Bayes approach developed by Gotelli and Ulrich, 2010) are crucial elements in order to understand assembly rules in ecological communities at both local and spatial scales. In order to explore general assembly rules and the effects of biome and spatial scale on such rules, here we studied a group of beetles (Coleoptera, Meloidae), using Namibia as a case of study. Data were gathered from 186 sampling sites, which allowed collection of 74 different species. We analyzed data at the level of (i) all sampled sites, (ii) all sites stratified by biome (Savannah, Succulent Karoo, Nama Karoo, Desert), and (iii) three randomly selected nested areas with three spatial scales each. Three competing algorithms were used for all analyses: (i) Fixed-Equiprobable, (ii) Fixed-Fixed, and (iii) Fixed-Proportional. In most of the null models we created, co-occurrence indicators revealed a non-random structure in meloid beetle assemblages at the global scale and at the scale of biomes, with species aggregation being much more important than species segregation in determining this non-randomness. At the level of biome, the same non-random organization was uncovered in assemblages from Savannah (where the aggregation pattern was particularly strong) and Succulent Karoo, but not in Desert and Nama Karoo. We conclude that species facilitation and similar niche in endemic species pairs may be particularly important as community drivers in our case of study. This pattern is also consistent with the evidence of a higher species diversity (normalized according to biome surface area) in the two former biomes. Historical patterns were perhaps also important for Succulent Karoo assemblages. Spatial scale had a reduced effect on patterning our data. This is consistent with the general homogeneity of environmental conditions over wide areas in Namibia.

  16. Analyzing the Effects of UAV Mobility Patterns on Data Collection in Wireless Sensor Networks.

    Science.gov (United States)

    Rashed, Sarmad; Soyturk, Mujdat

    2017-02-20

    Sensor nodes in a Wireless Sensor Network (WSN) can be dispersed over a remote sensing area (e.g., the regions that are hardly accessed by human beings). In such kinds of networks, datacollectionbecomesoneofthemajorissues. Getting connected to each sensor node and retrieving the information in time introduces new challenges. Mobile sink usage-especially Unmanned Aerial Vehicles (UAVs)-is the most convenient approach to covering the area and accessing each sensor node in such a large-scale WSN. However, the operation of the UAV depends on some parameters, such as endurance time, altitude, speed, radio type in use, and the path. In this paper, we explore various UAV mobility patterns that follow different paths to sweep the operation area in order to seek the best area coverage with the maximum number of covered nodes in the least amount of time needed by the mobile sink. We also introduce a new metric to formulate the tradeoff between maximizing the covered nodes and minimizing the operation time when choosing the appropriate mobility pattern. A realistic simulation environment is used in order to compare and evaluate the performance of the system. We present the performance results for the explored UAV mobility patterns. The results are very useful to present the tradeoff between maximizing the covered nodes and minimizing the operation time to choose the appropriate mobility pattern.

  17. Stochastic approach to determine spatial patterns of lizard community on a desert island

    Science.gov (United States)

    Venegas-Barrera, Crystian Sadiel; Morales-Bojórquez, Enrique; Arnaud, Gustavo

    2008-05-01

    One of the principal sources of error in identifying spatial arrangements is autocorrelation, since nearby points in space tend to have more similar values than would be expected by random change. When a Markovian approach is used, spatial arrangements can be measured as a transition probability between occupied and empty spaces in samples that are spatially dependent. We applied a model that incorporates first-order Markov chains to analyse spatial arrangement of numerical dominance, richness, and abundance on a lizard community at different spatial and temporal scales. We hypothesized that if a spatial dependence on abundance and richness exists in a diurnal desert community, then the Markov chains can predict the spatial arrangement. We found that each pair of values was dependent only on its immediate predecessor segment. In this sense, we found intergeneric differences at temporal and spatial scales of recurrence estimates. Also, in desert scrub, species show higher spatial aggregation and had lower species richness than at the island level; the inverse pattern occurred on rocky hillsides. At the species level, Uta stansburiana is the most abundant species in desert scrub, while Sauromalus slevini is the most abundant species on rocky hillsides. This report attempts to understand, using Markovian spatial models, the effect of nearby samples on local abundance and richness on different scales and over several seasons.

  18. Patches structure succession based on spatial point pattern features in semi-arid ecosystems of the water-wind erosion crisscross region

    Directory of Open Access Journals (Sweden)

    Hong-Min Hao

    2017-10-01

    Full Text Available Spatial point-pattern analysis can give insights to the underlying processes of patch succession and restoration. It is unclear whether inter-shrub competition determines patch succession. In this paper, we assessed the spatial patterns along patch succession using spatial statistics such as univariate and bivariate O-ring statistics, in the water-wind erosion crisscross region in semi-arid ecosystems of the Loess Plateau. Point pattern analysis results showed that there were no significant difference in three positions of the slope. The small and middle shrub patches were aggregatedly distributed in small spatial scale, meanwhile the large shrub patches were regularly distributed and dead shrub patches were randomly distributed. The small shrub patches were respectively aggregated to the middle and large patches at fine scales. Competition-induced regular distribution or negative relationship becomes obvious when analyzing the shift towards less aggregated perceptible effect of competition, a time component should always be included in spatial pattern-based inference of competition. Our results revealed that regular, clumped and random shrub patch patterns could occur, pending on size of shrub patches, and the shrub patches are distributed in different ways and they can present variant spatial point pattern features along patch size succession.

  19. Spatial uncertainty modeling of fuzzy information in images for pattern classification.

    Directory of Open Access Journals (Sweden)

    Tuan D Pham

    Full Text Available The modeling of the spatial distribution of image properties is important for many pattern recognition problems in science and engineering. Mathematical methods are needed to quantify the variability of this spatial distribution based on which a decision of classification can be made in an optimal sense. However, image properties are often subject to uncertainty due to both incomplete and imprecise information. This paper presents an integrated approach for estimating the spatial uncertainty of vagueness in images using the theory of geostatistics and the calculus of probability measures of fuzzy events. Such a model for the quantification of spatial uncertainty is utilized as a new image feature extraction method, based on which classifiers can be trained to perform the task of pattern recognition. Applications of the proposed algorithm to the classification of various types of image data suggest the usefulness of the proposed uncertainty modeling technique for texture feature extraction.

  20. Spatial patterns of wave energy delivery to coastal cliffs

    Science.gov (United States)

    Dickson, M. E.; Pentney, R.; Alvarez, M.; Malin, P.

    2010-12-01

    Recent studies have shown that wave energy delivery to coastal cliffs can be measured by proxy using arrays of seismometers that detect microseismic ground motion. There is considerable debate concerning the relative roles of subaerial weathering and wave processes in rocky coast evolution. Micro-seismic studies provide an important opportunity to progress understanding, because there have been relatively few quantitative measurements of the response of cliffed coasts to wave action. In this paper we describe new data from a study of sandstone sea-cliffs fronted by 100-150m wide near-horizontal shore platforms north of Auckland, New Zealand. Six seismometers were deployed in a cliff-top array and two seismometers were coupled to bedrock ledges a couple of metres above the cliff toe. An ADCP was deployed seaward of the shore platform to monitor incident wave conditions and two arrays of pressure sensors were deployed on the platform surface to monitor across-shore energy dissipation. The instrumentation enabled high resolution synchronous measurement of wave transformation and associated cliff motion. Data indicate that patterns of impact energy are heavily modulated by tidal conditions and by the characteristics of incident waves. The rock shore platform is nearly horizontal, elevated close to high tide level, and at its seaward edge plunges steeply into water 10-14m deep. Hence, under most conditions waves break against the seaward edge at low tide, and on top of the seaward edge at high tide. Under certain storm-wave conditions a significant portion of energy delivery is transferred to the cliff toe, but most of the time energy delivery is constrained to the seaward edge of the shore platform. These data imply that under most conditions it is more likely that the platform is being destroyed than created. This view presents a challenge to the static equilibrium model of cliff evolution that has dominated thought over the past two decades, and gives new impetus to

  1. Spatial Biodiversity Patterns of Madagascar's Amphibians and Reptiles

    Science.gov (United States)

    Brown, Jason L.; Sillero, Neftali; Glaw, Frank; Bora, Parfait; Vieites, David R.; Vences, Miguel

    2016-01-01

    Madagascar has become a model region for testing hypotheses of species diversification and biogeography, and many studies have focused on its diverse and highly endemic herpetofauna. Here we combine species distribution models of a near-complete set of species of reptiles and amphibians known from the island with body size data and a tabulation of herpetofaunal communities from field surveys, compiled up to 2008. Though taxonomic revisions and novel distributional records arose since compilation, we are confident that the data are appropriate for inferring and comparing biogeographic patterns among these groups of organisms. We observed species richness of both amphibians and reptiles was highest in the humid rainforest biome of eastern Madagascar, but reptiles also show areas of high richness in the dry and subarid western biomes. In several amphibian subclades, especially within the Mantellidae, species richness peaks in the central eastern geographic regions while in reptiles different subclades differ distinctly in their richness centers. A high proportion of clades and subclades of both amphibians and reptiles have a peak of local endemism in the topographically and bioclimatically diverse northern geographic regions. This northern area is roughly delimited by a diagonal spanning from 15.5°S on the east coast to ca. 15.0°S on the west coast. Amphibian diversity is highest at altitudes between 800–1200 m above sea-level whereas reptiles have their highest richness at low elevations, probably reflecting the comparatively large number of species specialized to the extended low-elevation areas in the dry and subarid biomes. We found that the range sizes of both amphibians and reptiles strongly correlated with body size, and differences between the two groups are explained by the larger body sizes of reptiles. However, snakes have larger range sizes than lizards which cannot be readily explained by their larger body sizes alone. Range filling, i.e., the amount

  2. Spatial Biodiversity Patterns of Madagascar's Amphibians and Reptiles.

    Science.gov (United States)

    Brown, Jason L; Sillero, Neftali; Glaw, Frank; Bora, Parfait; Vieites, David R; Vences, Miguel

    2016-01-01

    Madagascar has become a model region for testing hypotheses of species diversification and biogeography, and many studies have focused on its diverse and highly endemic herpetofauna. Here we combine species distribution models of a near-complete set of species of reptiles and amphibians known from the island with body size data and a tabulation of herpetofaunal communities from field surveys, compiled up to 2008. Though taxonomic revisions and novel distributional records arose since compilation, we are confident that the data are appropriate for inferring and comparing biogeographic patterns among these groups of organisms. We observed species richness of both amphibians and reptiles was highest in the humid rainforest biome of eastern Madagascar, but reptiles also show areas of high richness in the dry and subarid western biomes. In several amphibian subclades, especially within the Mantellidae, species richness peaks in the central eastern geographic regions while in reptiles different subclades differ distinctly in their richness centers. A high proportion of clades and subclades of both amphibians and reptiles have a peak of local endemism in the topographically and bioclimatically diverse northern geographic regions. This northern area is roughly delimited by a diagonal spanning from 15.5°S on the east coast to ca. 15.0°S on the west coast. Amphibian diversity is highest at altitudes between 800-1200 m above sea-level whereas reptiles have their highest richness at low elevations, probably reflecting the comparatively large number of species specialized to the extended low-elevation areas in the dry and subarid biomes. We found that the range sizes of both amphibians and reptiles strongly correlated with body size, and differences between the two groups are explained by the larger body sizes of reptiles. However, snakes have larger range sizes than lizards which cannot be readily explained by their larger body sizes alone. Range filling, i.e., the amount of

  3. Spatial Biodiversity Patterns of Madagascar's Amphibians and Reptiles.

    Directory of Open Access Journals (Sweden)

    Jason L Brown

    Full Text Available Madagascar has become a model region for testing hypotheses of species diversification and biogeography, and many studies have focused on its diverse and highly endemic herpetofauna. Here we combine species distribution models of a near-complete set of species of reptiles and amphibians known from the island with body size data and a tabulation of herpetofaunal communities from field surveys, compiled up to 2008. Though taxonomic revisions and novel distributional records arose since compilation, we are confident that the data are appropriate for inferring and comparing biogeographic patterns among these groups of organisms. We observed species richness of both amphibians and reptiles was highest in the humid rainforest biome of eastern Madagascar, but reptiles also show areas of high richness in the dry and subarid western biomes. In several amphibian subclades, especially within the Mantellidae, species richness peaks in the central eastern geographic regions while in reptiles different subclades differ distinctly in their richness centers. A high proportion of clades and subclades of both amphibians and reptiles have a peak of local endemism in the topographically and bioclimatically diverse northern geographic regions. This northern area is roughly delimited by a diagonal spanning from 15.5°S on the east coast to ca. 15.0°S on the west coast. Amphibian diversity is highest at altitudes between 800-1200 m above sea-level whereas reptiles have their highest richness at low elevations, probably reflecting the comparatively large number of species specialized to the extended low-elevation areas in the dry and subarid biomes. We found that the range sizes of both amphibians and reptiles strongly correlated with body size, and differences between the two groups are explained by the larger body sizes of reptiles. However, snakes have larger range sizes than lizards which cannot be readily explained by their larger body sizes alone. Range filling

  4. Analyzing Urban Human Mobility Patterns through a Thematic Model at a Finer Scale

    Directory of Open Access Journals (Sweden)

    Faming Zhang

    2016-06-01

    Full Text Available Taxi trajectories reflect human mobility over a road network. Pick-up and drop-off locations in different time periods represent origins and destinations of trips, respectively, demonstrating the spatiotemporal characteristics of human behavior. Each trip can be viewed as a displacement in the random walk model, and the distribution of extracted trips shows a distance decay effect. To identify the spatial similarity of trips at a finer scale, this paper investigates the distribution of trips through topic modeling techniques. Firstly, trip origins and trip destinations were identified from raw GPS data. Then, different trips were given semantic information, i.e., link identification numbers with a semantic enrichment process. Each taxi trajectory was composed of a series of trip destinations corresponding to the same taxi. Subsequently, each taxi trajectory was analogous to a document consisting of different words, and all taxi’s trajectories could be regarded as document corpora, enabling a semantic analysis of massive trip destinations. Finally, we obtained different trip destination topics reflecting the spatial similarity and regional property of human mobility through LDA topic model training. The effectiveness of this approach was illustrated by a case study using a large dataset of taxi trajectories collected from 2 to 8 June 2014 in Wuhan, China.

  5. Analyzing the Transformation of China’s First Marriage Pattern Using Nuptiality Tables

    Directory of Open Access Journals (Sweden)

    Yan Wei

    2014-03-01

    Full Text Available Using data from several censuses in China, including the newly released 2010 data, this study constructs net nuptiality tables as an analytical instrument to descriptively analyse the shape of China’s first marriage pattern from 1982 to 2010, including the age-specific probabilities of first marriage, the percentage of remaining single by age, and number of years remaining single by age for both males and females. Our analysis reveals that while age-specific probabilities of first marriage have significantly declined for females during the past three decades, such probabilities for males have declined much less. The percentage remaining single below age 30 has increased up to 2010. At age 50 the proportion is 4.6 percent for males, while that for females is just one percent. Patterns of singlehood have also changed at younger ages, with an ever increasing period of singlehood, especially for males.

  6. Spatial patterns of microbial diversity and activity in an aged creosote-contaminated site

    OpenAIRE

    Mukherjee, Shinjini; Juottonen, Heli; Siivonen, Pauli; Lloret Quesada, Cosme; Tuomi, Pirjo; Pulkkinen, Pertti; Yrjälä, Kim

    2014-01-01

    Restoration of polluted sites via in situ bioremediation relies heavily on the indigenous microbes and their activities. Spatial heterogeneity of microbial populations, contaminants and soil chemical parameters on such sites is a major hurdle in optimizing and implementing an appropriate bioremediation regime. We performed a grid-based sampling of an aged creosote-contaminated site followed by geostatistical modelling to illustrate the spatial patterns of microbial diversity and activity and ...

  7. Analyzing collaboration networks and developmental patterns of nano-enabled drug delivery (NEDD for brain cancer

    Directory of Open Access Journals (Sweden)

    Ying Huang

    2015-07-01

    Full Text Available The rapid development of new and emerging science & technologies (NESTs brings unprecedented challenges, but also opportunities. In this paper, we use bibliometric and social network analyses, at country, institution, and individual levels, to explore the patterns of scientific networking for a key nano area – nano-enabled drug delivery (NEDD. NEDD has successfully been used clinically to modulate drug release and to target particular diseased tissues. The data for this research come from a global compilation of research publication information on NEDD directed at brain cancer. We derive a family of indicators that address multiple facets of research collaboration and knowledge transfer patterns. Results show that: (1 international cooperation is increasing, but networking characteristics change over time; (2 highly productive institutions also lead in influence, as measured by citation to their work, with American institutes leading; (3 research collaboration is dominated by local relationships, with interesting information available from authorship patterns that go well beyond journal impact factors. Results offer useful technical intelligence to help researchers identify potential collaborators and to help inform R&D management and science & innovation policy for such nanotechnologies.

  8. Impacts from Land Use Pattern on Spatial Distribution of Cultivated Soil Heavy Metal Pollution in Typical Rural-Urban Fringe of Northeast China

    OpenAIRE

    Li, Wenbo; Wang, Dongyan; Wang, Qing; Liu, Shuhan; Zhu, Yuanli; Wu, Wenjun

    2017-01-01

    Under rapid urban sprawl in Northeast China, land conversions are not only encroaching on the quantity of cultivated lands, but also posing a great threat to black soil conservation and food security. This study?s aim is to explore the spatial relationship between comprehensive cultivated soil heavy metal pollution and peri-urban land use patterns in the black soil region. We applied spatial lag regression to analyze the relationship between PLI (pollution load index) and influencing factors ...

  9. Spatial and Temporal Patterns of Land Loss in Mississippi River Delta

    Science.gov (United States)

    Roy, S.; Edmonds, D. A.; Robeson, S. M.; Ortiz, A. C.; Nienhuis, J.

    2017-12-01

    Land loss across the Louisiana coast is predicted to exceed 10,000 km2 by 2100. An estimated 18-24 billion tons of sediment is needed to offset land loss, but available sediment supply from the Mississippi River falls short. As a result, coastal restoration plans must target certain areas, which highlight the importance of understanding the processes and patterns of land loss. In this study, we use remote sensing to investigate and quantify land loss patterns, as well as the corresponding morphology of the land segments that are lost. Using Google Earth Engine, we combined over 10,000 time-series Landsat imagery in the Mississippi River Delta to create twelve, three-year composites from 1983 to 2016. We then spectrally unmixed each pixel into land and water percentages, and create land-water binaries. Stratifying by hydrologic unit code boundaries and local subsidence rates, we analyze the land loss pixels using landscape metrics. Our results show that the total loss from 1983-2016 for our area of interest was 908.02 km2 (loss of 5.84%) and total land area was 6855.63 km2 (49.97 % of total area) in 2016 compared to 7763.65 km2 (44.13%) in 1983 consistent with previous estimates for our study area. Land loss pixels have a low patch density (mean of 4.80 patches/ha) and high aggregation indices (mean of 47.15), which indicates that land-loss pixels tend to clump together. The shape index of these clumped pixels are also low (mean of 2.32), which points towards long, narrow patches and edges. Local indicator of spatial autocorrelation (LISA) areas was applied to determine areas of high positive autocorrelation within the loss pixels which reinforced loss across edges. Based on spatial metrics and subsidence grid based analysis on the temporal pattern of land loss pixels we find that i) land change (both growth and loss pixels) occurs along the marsh, lake and coastal edges rather than inland; ii) subsidence, though positively correlated with landloss, is no longer the

  10. [Explore the spatial and temporal patterns of water pollution in the Yincungang canal of the Lake Taihu basin, China].

    Science.gov (United States)

    Yang, Xiao-Ying; Luo, Xing-Zhang; Zheng, Zheng; Fang, Shu-Bo

    2012-09-01

    Two high-density snap-shot samplings were conducted along the Yincungang canal, one important tributary of the Lake Tai, in April (low flow period) and June (high flow period) of 2010. Geostatistical analysis based on the river network distance was used to analyze the spatial and temporal patterns of the pollutant concentrations along the canal with an emphasis on chemical oxygen demand (COD) and total nitrogen (TN). Study results have indicated: (1) COD and TN concentrations display distinctly different spatial and temporal patterns between the low and high flow periods. COD concentration in June is lower than that in April, while TN concentration has the contrary trend. (2) COD load is relatively constant during the period between the two monitoring periods. The spatial correlation structure of COD is exponential for both April and June, and the change of COD concentration is mainly influenced by hydrological conditions. (3) Nitrogen load from agriculture increased significantly during the period between the two monitoring periods. Large amount of chaotic fertilizing by individual farmers has led to the loss of the spatial correlation among the observed TN concentrations. Hence, changes of TN concentration in June are under the dual influence of agricultural fertilizing and hydrological conditions. In the view of the complex hydrological conditions and serious water pollution in the Lake Taihu region, geostatistical analysis is potentially a useful tool for studying the characteristics of pollutant distribution and making predictions in the region.

  11. Spatial relationships and movement patterns of the air cargo industry in airport regions

    Directory of Open Access Journals (Sweden)

    Petrus J. van V. Coetzee

    2017-05-01

    Full Text Available Background: During the past few years, with the increase in air traffic and the expansion of airports, very few industries had such a large spatial development and movement impact as that of airport-related clusters or airport regions. Although much research was done on the various impacts of the airport industry, very little research was done on the air cargo industry in airport regions. Objectives: This article specifically explored the unique spatial relationships, impacts, trends and movement patterns of the air cargo industry within a typical airport region. Method: The article focused on the OR Tambo International Airport in Gauteng, South Africa, as a case study and was informed by an extensive quantitative spatial and land use analysis and modelling of the study area. Results: The article presented findings and insights on the movement patterns and relationships between (1 the airport facility and (2 the spatial configuration of air cargo industries in the particular airport region. These findings also provided some framework for a possible spatial model and guideline that could assist in steering and managing development and movement patterns in airport regions. Conclusion: The article provided new insights and understanding on the spatial dynamics of airport regions and the air cargo industry, ultimately addressing some gaps in this knowledge field. The article in the end highlighted the need for a different and novel approach to the planning and management of the air cargo industry in airport regions and a basis for further research.

  12. Calibration of a distributed hydrologic model using observed spatial patterns from MODIS data

    Science.gov (United States)

    Demirel, Mehmet C.; González, Gorka M.; Mai, Juliane; Stisen, Simon

    2016-04-01

    Distributed hydrologic models are typically calibrated against streamflow observations at the outlet of the basin. Along with these observations from gauging stations, satellite based estimates offer independent evaluation data such as remotely sensed actual evapotranspiration (aET) and land surface temperature. The primary objective of the study is to compare model calibrations against traditional downstream discharge measurements with calibrations against simulated spatial patterns and combinations of both types of observations. While the discharge based model calibration typically improves the temporal dynamics of the model, it seems to give rise to minimum improvement of the simulated spatial patterns. In contrast, objective functions specifically targeting the spatial pattern performance could potentially increase the spatial model performance. However, most modeling studies, including the model formulations and parameterization, are not designed to actually change the simulated spatial pattern during calibration. This study investigates the potential benefits of incorporating spatial patterns from MODIS data to calibrate the mesoscale hydrologic model (mHM). This model is selected as it allows for a change in the spatial distribution of key soil parameters through the optimization of pedo-transfer function parameters and includes options for using fully distributed daily Leaf Area Index (LAI) values directly as input. In addition the simulated aET can be estimated at a spatial resolution suitable for comparison to the spatial patterns observed with MODIS data. To increase our control on spatial calibration we introduced three additional parameters to the model. These new parameters are part of an empirical equation to the calculate crop coefficient (Kc) from daily LAI maps and used to update potential evapotranspiration (PET) as model inputs. This is done instead of correcting/updating PET with just a uniform (or aspect driven) factor used in the mHM model

  13. Spatial Autocorrelation Patterns of Understory Plant Species in a Subtropical Rainforest at Lanjenchi, Southern Taiwan

    Directory of Open Access Journals (Sweden)

    Su-Wei Fan

    2010-06-01

    Full Text Available Many studies described relationships between plant species and intrinsic or exogenous factors, but few quantified spatial scales of species patterns. In this study, quantitative methods were used to explore the spatial scale of understory species (including resident and transient species, in order to identify the influential factors of species distribution. Resident species (including herbaceous species, climbers and tree ferns < 1 m high were investigated on seven transects, each 5-meter wide and 300-meter long, at Lanjenchi plot in Nanjenshan Reserve, southern Taiwan. Transient species (seedling of canopy, subcanopy and shrub species < 1 cm diameter at breast height were censused in three of the seven transects. The herb coverage and seedling abundance were calculated for each 5 × 5 m quadrat along the transects, and Moran’s I and Galiano’s new local variance (NLV indices were then used to identify the spatial scale of autocorrelation for each species. Patterns of species abundance of understory layer varied among species at fine scale within 50 meters. Resident species showed a higher proportion of significant autocorrelation than the transient species. Species with large size or prolonged fronds or stems tended to show larger scales in autocorrelation. However, dispersal syndromes and fruit types did not relate to any species’ spatial patterns. Several species showed a significant autocorrelation at a 180-meter class which happened to correspond to the local replicates of topographical features in hilltops. The spatial patterns of understory species at Lanjenchi plot are mainly influenced by species’ intrinsic traits and topographical characteristics.

  14. Unraveling landscapes with phytogenic mounds (nebkhas): An exploration of spatial pattern

    Science.gov (United States)

    Quets, Jan J.; Temmerman, Stijn; El-Bana, Magdy I.; Al-Rowaily, Saud L.; Assaeed, Abdulaziz M.; Nijs, Ivan

    2013-05-01

    Phytogenic mounds (nebkhas) often are symptoms of desertification in arid regions. Interactions among nebkhas and between nebkhas and their environment are however poorly examined. To this end, three main hypotheses of nebkha pattern formation were evaluated in this study. These state that nebkha patterns are either shaped by: (i) biologically induced recruitment inhibiting zones, (ii) biologically induced recruitment encouraging zones, or (iii) by the spatial distribution of abiotic factors which are not biologically driven. Contrasting nebkha landscapes were examined: a highly dense New Mexican mesquite (Prosopis glandulosa) and snakeweed (Gutierrezia sarothrae and Gutierrezia microcephala) ecosystem, and a low-density mixed Tamarix aphylla and Calligonum comosum field in central Libya. Spatial second-order statistics of strategically chosen nebkha subpatterns were compared with those of null models in which observed patches were spatially randomized without overlap. Null model deviations were assessed with goodness-of-fit tests, and interpreted in terms of hypothesized mechanisms of nebkha pattern formation. Our results suggest that biologically induced recruitment inhibiting zones surround adult mesquite nebkhas. The configuration of Calligonum and Tamarix nebkhas may be driven by spatial dynamics of abiotic microsites which are not caused by nebkha interactions. Hence we conclude that both biotic and abiotic drivers can shape nebkha spatial patterns.

  15. "Chess-board pattern" spatial modulation of magnetization. Assessment of myocardial function

    DEFF Research Database (Denmark)

    Thomsen, C

    1992-01-01

    . Through spatial modulation of the magnetization the entire image can be labeled in different patterns. Two new pulse sequences are presented, giving a chess-board like spatial modulation. These pulse sequences have several advantages compared with the previously published methods, as the modulation time...... is half that required to obtain a 2-dimensional grid, the area in the image with high signal intensity was significantly larger, and the radiofrequency power deposition was substantially decreased. By labeling the heart at diastole the chess-board pattern tagging of the heart wall could be followed...

  16. Spatial patterns in the distribution of kimberlites: relationship to tectonic processes and lithosphere structure

    DEFF Research Database (Denmark)

    Chemia, Zurab; Artemieva, Irina; Thybo, Hans

    2015-01-01

    weakness zones may control the spatial patterns of kimberlites, but this hypothesis has never been tested by geophysical methods. As the first step in our analysis of tectonic and lithosphere control of kimberlite-type magmatism, we perform a detailed global analysis of the spatial patterns of kimberlites......) that initiate the rise of kimberlite melts through the lithospheric mantle forms the major pipes with characteristic distance ranging from 100 to 300 km and are, apparently controlled, by the past structure of the lithosphere and a "vigor" of lithosphere-mantle interaction....

  17. The study for the Spatial Distribution Pattern of NDVI in the Western of Jilin Province

    Science.gov (United States)

    Yang, Shu-jie; Li, Xiao-dong; Yan, Shou-gang

    2018-02-01

    Using methods of spatial autocorrelation analysis and trend analysis, the paper studies the spatial distribution pattern of NDVI based on the GIMMS NDVI dataset (1998-2008), in Western Jilin. The maximum value for 15d is got through the method of MAX processing. Results show that: the NDVI in growing season shows a rising trend in western Jilin in 1998-2008. In the study area, the NDVI in Western Jilin shows positive spatial autocorrelation in the whole region, but the partial NDVI is apt to scattered distribution, which means the vegetation cover of Western Jilin is generally fragmental.

  18. Patterned-string tasks: relation between fine motor skills and visual-spatial abilities in parrots.

    Science.gov (United States)

    Krasheninnikova, Anastasia

    2013-01-01

    String-pulling and patterned-string tasks are often used to analyse perceptual and cognitive abilities in animals. In addition, the paradigm can be used to test the interrelation between visual-spatial and motor performance. Two Australian parrot species, the galah (Eolophus roseicapilla) and the cockatiel (Nymphicus hollandicus), forage on the ground, but only the galah uses its feet to manipulate food. I used a set of string pulling and patterned-string tasks to test whether usage of the feet during foraging is a prerequisite for solving the vertical string pulling problem. Indeed, the two species used techniques that clearly differed in the extent of beak-foot coordination but did not differ in terms of their success in solving the string pulling task. However, when the visual-spatial skills of the subjects were tested, the galahs outperformed the cockatiels. This supports the hypothesis that the fine motor skills needed for advanced beak-foot coordination may be interrelated with certain visual-spatial abilities needed for solving patterned-string tasks. This pattern was also found within each of the two species on the individual level: higher motor abilities positively correlated with performance in patterned-string tasks. This is the first evidence of an interrelation between visual-spatial and motor abilities in non-mammalian animals.

  19. Patterned-string tasks: relation between fine motor skills and visual-spatial abilities in parrots.

    Directory of Open Access Journals (Sweden)

    Anastasia Krasheninnikova

    Full Text Available String-pulling and patterned-string tasks are often used to analyse perceptual and cognitive abilities in animals. In addition, the paradigm can be used to test the interrelation between visual-spatial and motor performance. Two Australian parrot species, the galah (Eolophus roseicapilla and the cockatiel (Nymphicus hollandicus, forage on the ground, but only the galah uses its feet to manipulate food. I used a set of string pulling and patterned-string tasks to test whether usage of the feet during foraging is a prerequisite for solving the vertical string pulling problem. Indeed, the two species used techniques that clearly differed in the extent of beak-foot coordination but did not differ in terms of their success in solving the string pulling task. However, when the visual-spatial skills of the subjects were tested, the galahs outperformed the cockatiels. This supports the hypothesis that the fine motor skills needed for advanced beak-foot coordination may be interrelated with certain visual-spatial abilities needed for solving patterned-string tasks. This pattern was also found within each of the two species on the individual level: higher motor abilities positively correlated with performance in patterned-string tasks. This is the first evidence of an interrelation between visual-spatial and motor abilities in non-mammalian animals.

  20. A Heat Vulnerability Index: Spatial Patterns of Exposure, Sensitivity and Adaptive Capacity for Santiago de Chile.

    Science.gov (United States)

    Inostroza, Luis; Palme, Massimo; de la Barrera, Francisco

    2016-01-01

    Climate change will worsen the high levels of urban vulnerability in Latin American cities due to specific environmental stressors. Some impacts of climate change, such as high temperatures in urban environments, have not yet been addressed through adaptation strategies, which are based on poorly supported data. These impacts remain outside the scope of urban planning. New spatially explicit approaches that identify highly vulnerable urban areas and include specific adaptation requirements are needed in current urban planning practices to cope with heat hazards. In this paper, a heat vulnerability index is proposed for Santiago, Chile. The index was created using a GIS-based spatial information system and was constructed from spatially explicit indexes for exposure, sensitivity and adaptive capacity levels derived from remote sensing data and socio-economic information assessed via principal component analysis (PCA). The objective of this study is to determine the levels of heat vulnerability at local scales by providing insights into these indexes at the intra city scale. The results reveal a spatial pattern of heat vulnerability with strong variations among individual spatial indexes. While exposure and adaptive capacities depict a clear spatial pattern, sensitivity follows a complex spatial distribution. These conditions change when examining PCA results, showing that sensitivity is more robust than exposure and adaptive capacity. These indexes can be used both for urban planning purposes and for proposing specific policies and measures that can help minimize heat hazards in highly dynamic urban areas. The proposed methodology can be applied to other Latin American cities to support policy making.

  1. Soil erosion spatial distribution patterns of different slopes by using 137Cs tracer

    International Nuclear Information System (INIS)

    Yang Mingyi; Tian Junliang; Liu Puling

    1999-01-01

    The soil erosion spatial patterns of several slopes were studied through measuring 137 Cs in the top layer soil on the different slopes. The results show that all the soil erosion spatial distribution patterns are in fluctuate trend. The soil erosion is more severe in the middle part on the short farmland slope. The erosion pattern of the gully base show violent head ward erosion. Because of the influence of vegetation cover and other factor, the erosion patterns on the gully slopes are complex. The soil erosion differs obviously with the compound slopes of the same slope gradient and slope length. In general, the main factor that influence soil erosion is the change of the micro-landforms in a long period

  2. Different Patterns of Cartilage Mineralization Analyzed by Comparison of Human, Porcine, and Bovine Laryngeal Cartilages.

    Science.gov (United States)

    Claassen, Horst; Schicht, Martin; Fleiner, Bernd; Hillmann, Ralf; Hoogeboom, Sebastian; Tillmann, Bernhard; Paulsen, Friedrich

    2017-06-01

    Laryngeal cartilages undergo a slow ossification process during aging, making them an excellent model for studying cartilage mineralization and ossification processes. Pig laryngeal cartilages are similar to their human counterparts in shape and size, also undergo mineralization, facilitating the study of cartilage mineralization. We investigated the processes of cartilage mineralization and ossification and compared these with the known processes in growth plates. Thyroid cartilages from glutaraldehyde-perfused male minipigs and from domestic pigs were used for X-ray, light microscopic, and transmission electron microscopic analyses. We applied different fixation and postfixation solutions to preserve cell shape, proteoglycans, and membranes. In contrast to the ossifying human thyroid cartilage, predominantly cartilage mineralization was observed in minipig and domestic pig thyroid cartilages. The same subset of chondrocytes responsible for growth plate mineralization is also present in thyroid cartilage mineralization. Besides mineralization mediated by matrix vesicles, a second pattern of cartilage mineralization was observed in thyroid cartilage only. Here, the formation and growth of crystals were closely related to collagen fibrils, which served as guide rails for the expansion of mineralization. It is hypothesized that the second pattern of cartilage mineralization may be similar to a maturation of mineralized cartilage after initial matrix vesicles-mediated cartilage mineralization.

  3. Patterns in the spatial distribution of Peruvian anchovy ( Engraulis ringens) revealed by spatially explicit fishing data

    Science.gov (United States)

    Bertrand, Sophie; Díaz, Erich; Lengaigne, Matthieu

    2008-10-01

    Peruvian anchovy ( Engraulis ringens) stock abundance is tightly driven by the high and unpredictable variability of the Humboldt Current Ecosystem. Management of the fishery therefore cannot rely on mid- or long-term management policy alone but needs to be adaptive at relatively short time scales. Regular acoustic surveys are performed on the stock at intervals of 2 to 4 times a year, but there is a need for more time continuous monitoring indicators to ensure that management can respond at suitable time scales. Existing literature suggests that spatially explicit data on the location of fishing activities could be used as a proxy for target stock distribution. Spatially explicit commercial fishing data could therefore guide adaptive management decisions at shorter time scales than is possible through scientific stock surveys. In this study we therefore aim to (1) estimate the position of fishing operations for the entire fleet of Peruvian anchovy purse-seiners using the Peruvian satellite vessel monitoring system (VMS), and (2) quantify the extent to which the distribution of purse-seine sets describes anchovy distribution. To estimate fishing set positions from vessel tracks derived from VMS data we developed a methodology based on artificial neural networks (ANN) trained on a sample of fishing trips with known fishing set positions (exact fishing positions are known for approximately 1.5% of the fleet from an at-sea observer program). The ANN correctly identified 83% of the real fishing sets and largely outperformed comparative linear models. This network is then used to forecast fishing operations for those trips where no observers were onboard. To quantify the extent to which fishing set distribution was correlated to stock distribution we compared three metrics describing features of the distributions (the mean distance to the coast, the total area of distribution, and a clustering index) for concomitant acoustic survey observations and fishing set positions

  4. A perturbation analysis of a mechanical model for stable spatial patterning in embryology

    Science.gov (United States)

    Bentil, D. E.; Murray, J. D.

    1992-12-01

    We investigate a mechanical cell-traction mechanism that generates stationary spatial patterns. A linear analysis highlights the model's potential for these heterogeneous solutions. We use multiple-scale perturbation techniques to study the evolution of these solutions and compare our solutions with numerical simulations of the model system. We discuss some potential biological applications among which are the formation of ridge patterns, dermatoglyphs, and wound healing.

  5. Spatial patterning and floral synchrony among trillium populations with contrasting histories of herbivory

    Directory of Open Access Journals (Sweden)

    Christopher R. Webster

    2015-02-01

    Full Text Available We investigated the spatial patterning and floral synchrony within and among populations of a non-clonal, forest understory herb, Trillium catesbaei. Two populations of T. catesbaei within Great Smoky Mountains National Park were monitored for five years: Cades Cove (high deer abundance and Whiteoak Sink (low deer abundance. All individuals within each population were mapped during year one and five. Only flowering and single-leaf juveniles were mapped during intervening years. Greater distances between flowering plants (plants currently in flower and substantially lower population densities and smaller patch sizes were observed at Cades Cove versus Whiteoak Sink. However, with the exception of flowering plants, contrasting histories of herbivory did not appear to fundamentally alter the spatial patterning of the T. catesbaei population at Cades Cove, an area with a long and well-documented history of deer overabundance. Regardless of browse history, non-flowering life stages were significantly clustered at all spatial scales examined. Flowering plants were clustered in all years at Whiteoak Sink, but more often randomly distributed at Cades Cove, possibly as a result of their lower abundance. Between years, however, there was a positive spatial association between the locations of flowering plants at both sites. Flowering rate was synchronous between sites, but lagged a year behind favorable spring growing conditions, which likely allowed plants to allocate photosynthate from a favorable year towards flowering the subsequent year. Collectively, our results suggest that chronically high levels of herbivory may be associated with spatial patterning of flowering within populations of a non-clonal plant. They also highlight the persistence of underlying spatial patterns, as evidenced by high levels of spatial clustering among non-flowering individuals, and the pervasive, although muted in a population subjected to chronic herbivory, influence of

  6. Combining satellite data and appropriate objective functions for improved spatial pattern performance of a distributed hydrologic model

    Directory of Open Access Journals (Sweden)

    M. C. Demirel

    2018-02-01

    Full Text Available Satellite-based earth observations offer great opportunities to improve spatial model predictions by means of spatial-pattern-oriented model evaluations. In this study, observed spatial patterns of actual evapotranspiration (AET are utilised for spatial model calibration tailored to target the pattern performance of the model. The proposed calibration framework combines temporally aggregated observed spatial patterns with a new spatial performance metric and a flexible spatial parameterisation scheme. The mesoscale hydrologic model (mHM is used to simulate streamflow and AET and has been selected due to its soil parameter distribution approach based on pedo-transfer functions and the build in multi-scale parameter regionalisation. In addition two new spatial parameter distribution options have been incorporated in the model in order to increase the flexibility of root fraction coefficient and potential evapotranspiration correction parameterisations, based on soil type and vegetation density. These parameterisations are utilised as they are most relevant for simulated AET patterns from the hydrologic model. Due to the fundamental challenges encountered when evaluating spatial pattern performance using standard metrics, we developed a simple but highly discriminative spatial metric, i.e. one comprised of three easily interpretable components measuring co-location, variation and distribution of the spatial data. The study shows that with flexible spatial model parameterisation used in combination with the appropriate objective functions, the simulated spatial patterns of actual evapotranspiration become substantially more similar to the satellite-based estimates. Overall 26 parameters are identified for calibration through a sequential screening approach based on a combination of streamflow and spatial pattern metrics. The robustness of the calibrations is tested using an ensemble of nine calibrations based on different seed numbers using the

  7. Combining satellite data and appropriate objective functions for improved spatial pattern performance of a distributed hydrologic model

    Science.gov (United States)

    Demirel, Mehmet C.; Mai, Juliane; Mendiguren, Gorka; Koch, Julian; Samaniego, Luis; Stisen, Simon

    2018-02-01

    Satellite-based earth observations offer great opportunities to improve spatial model predictions by means of spatial-pattern-oriented model evaluations. In this study, observed spatial patterns of actual evapotranspiration (AET) are utilised for spatial model calibration tailored to target the pattern performance of the model. The proposed calibration framework combines temporally aggregated observed spatial patterns with a new spatial performance metric and a flexible spatial parameterisation scheme. The mesoscale hydrologic model (mHM) is used to simulate streamflow and AET and has been selected due to its soil parameter distribution approach based on pedo-transfer functions and the build in multi-scale parameter regionalisation. In addition two new spatial parameter distribution options have been incorporated in the model in order to increase the flexibility of root fraction coefficient and potential evapotranspiration correction parameterisations, based on soil type and vegetation density. These parameterisations are utilised as they are most relevant for simulated AET patterns from the hydrologic model. Due to the fundamental challenges encountered when evaluating spatial pattern performance using standard metrics, we developed a simple but highly discriminative spatial metric, i.e. one comprised of three easily interpretable components measuring co-location, variation and distribution of the spatial data. The study shows that with flexible spatial model parameterisation used in combination with the appropriate objective functions, the simulated spatial patterns of actual evapotranspiration become substantially more similar to the satellite-based estimates. Overall 26 parameters are identified for calibration through a sequential screening approach based on a combination of streamflow and spatial pattern metrics. The robustness of the calibrations is tested using an ensemble of nine calibrations based on different seed numbers using the shuffled complex

  8. On the spatial pattern of semi-annual signals present in GRACE gravity fields

    Science.gov (United States)

    Naeimi, M.; Mueller, J.

    2009-04-01

    GRACE monthly solutions clearly show mass changes and mass redistribution within the earth. Such variability is due to some known and unknown geophysical and geodynamical processes interacting in the earth system. One way to distinguish between these different sources is to analyze the compound gravity signals in the spectral domain to separate phenomena with different temporal resolutions. Since the launch of GRACE satellites, more than seventy monthly solutions have been released by different processing centers. As the time span of the available data increases, the possibility of significantly detecting signals with extended temporal wavelength will increase, too. In this work, a spectral analysis is performed to the GRACE geoids over the globe and the spatial patterns of some relevant periodicities are shown as well as regions with secular changes. Besides some well known temporal variations like secular changes and annual cycles, our study explicitly shows the existence of semi-annual signals with considerable amplitudes in Nepal and northern India as well as in the Polar Regions. The significance of the signals is discussed and probable explanation will be given as well.

  9. Analysis of Spatial Pattern and Influencing Factors of E-Commerce

    Science.gov (United States)

    Zhang, Y.; Chen, J.; Zhang, S.

    2017-09-01

    This paper aims to study the relationship between e-commerce development and geographical characteristics using data of e-commerce, economy, Internet, express delivery and population from 2011 to 2015. Moran's I model and GWR model are applied to analyze the spatial pattern of E-commerce and its influencing factors. There is a growth trend of e-commerce from west to east, and it is obvious to see that e-commerce development has a space-time clustering, especially around the Yangtze River delta. The comprehensive factors caculated through PCA are described as fundamental social productivity, resident living standard and population sex structure. The first two factors have positive correlation with e-commerce, and the intensity of effect increases yearly. However, the influence of population sex structure on the E-commerce development is not significant. Our results suggest that the clustering of e-commerce has a downward trend and the impact of driving factors on e-commerce is observably distinct from year to year in space.

  10. Hydrologic controls on aperiodic spatial organization of the ridge–slough patterned landscape

    Directory of Open Access Journals (Sweden)

    S. T. Casey

    2016-11-01

    Full Text Available A century of hydrologic modification has altered the physical and biological drivers of landscape processes in the Everglades (Florida, USA. Restoring the ridge–slough patterned landscape, a dominant feature of the historical system, is a priority but requires an understanding of pattern genesis and degradation mechanisms. Physical experiments to evaluate alternative pattern formation mechanisms are limited by the long timescales of peat accumulation and loss, necessitating model-based comparisons, where support for a particular mechanism is based on model replication of extant patterning and trajectories of degradation. However, multiple mechanisms yield a central feature of ridge–slough patterning (patch elongation in the direction of historical flow, limiting the utility of that characteristic for discriminating among alternatives. Using data from vegetation maps, we investigated the statistical features of ridge–slough spatial patterning (ridge density, patch perimeter, elongation, patch size distributions, and spatial periodicity to establish more rigorous criteria for evaluating model performance and to inform controls on pattern variation across the contemporary system. Mean water depth explained significant variation in ridge density, total perimeter, and length : width ratios, illustrating an important pattern response to existing hydrologic gradients. Two independent analyses (2-D periodograms and patch size distributions provide strong evidence against regular patterning, with the landscape exhibiting neither a characteristic wavelength nor a characteristic patch size, both of which are expected under conditions that produce regular patterns. Rather, landscape properties suggest robust scale-free patterning, indicating genesis from the coupled effects of local facilitation and a global negative feedback operating uniformly at the landscape scale. Critically, this challenges widespread invocation of scale-dependent negative

  11. Spatial attraction in migrants' settlement patterns in the city of Catania

    Directory of Open Access Journals (Sweden)

    Angelo Mazza

    2016-07-01

    Full Text Available Background: In broad terms, and apart from ethnic discriminatory rules enforced in some places and at some times, residential segregation may be ascribed both to economic inhomogeneities in the urban space (e.g., in the cost of rents, or in occupation opportunities and to spatial attraction among individuals sharing the same group identity and culture. Objective: Traditional indices of spatial segregation do not distinguish between these two sources of clustering. Furthermore, they typically rely on census tracts, a scale that does not allow for fine-grained analysis. Also, the use of alternative zoning often leads to conflicting results. The aim of this paper is to measure spatial attraction among groups of foreign migrants in Catania (Italy using individual household data. Methods: We apply a version of Ripley's K-function specially conceived for assessing spatial attraction while adjusting for the effects of spatial inhomogeneity. To avoid the risk of confounding the two sources of clustering, spatial inhomogeneity is estimated following a case-control approach. Results: Different parts of the city exhibit different suitabilities for migrants of different nationalities, with groups mainly involved in housekeeping and caregiving being more spread than the ones specialized in peddling and retailing. A significant spatial attraction has been found for Sri Lankan, Mauritians, Senegalese, and Chinese. Conversely, the settlement patterns of Tunisians and Moroccans comply with random allocation. These results seem consistent with the hypothesis of a relevant correlation between chain migration and spatial attraction.

  12. Postfire environmental conditions influence the spatial pattern of regeneration for Pinus ponderosa

    Science.gov (United States)

    V. H. Bonnet; Anna Schoettle; W. D. Shepperd

    2005-01-01

    Regeneration of ponderosa pine after fire depends on the patterns of seed availability and the environmental conditions that define safe sites for seedling establishment. A transect approach was applied in 2002 to determine the spatial distribution of regeneration from unburned to burned areas within the landscape impacted by the Jasper Fire of 2000 in the...

  13. Spatial and seasonal distribution patterns of the ragged-tooth shark ...

    African Journals Online (AJOL)

    Catches from competitive shore-anglers, inshore boatbased anglers and sightings by spearfishers and divers were used to infer the spatial and seasonal movement patterns of young-of-the-year (2.4m TL) ragged-tooth sharks Carcharias taurus along ...

  14. Spatial distribution of seeds and seedlings of two tropical tree species: Is there correspondence between patterns?

    International Nuclear Information System (INIS)

    Parrado Rosselli, Angela

    2007-01-01

    The spatial patterns of seed and seedling distribution relative to parent trees (seed and seedling shadow, respectively) were studied for Dacryodes chimantensis (Burseraceae) and Brosimum utile (Moraceae), two common tree species of terra firme forests of Colombian Amazonia. The general objective was to assess whether the patterns imposed by seed dispersal change or persist in subsequent life stages occurring during the transition from seeds/saplings to adult stages. Seed and seedling shadows on the ground were characterized for each tree species along four 50-m radial transects from the base of the parent tree. Causes of seed and seedling predation as a function of distance to the parent tree were determined, as well as the spatial consistency between life stages. Results showed that seed density of both Dacryodes and Brosimum declined leptokurtically with distance, and it was skewed towards the parent tree. However, seed density was more skewed and leptokurtic in Dacryodes than in Brosimum. The overall trend was maintained in the seedling stage of both species and was positively correlated with the distribution patterns of seeds. Seed and seedling predation were positively correlated with density and negatively correlated with the distance from the parent tree. Factors that could be generating the high consistency between the spatial patterns of seed and seedling distribution are discussed, as well as its implications in the population structure of both species and the debate on the factors that influence the spatial distribution of plant species in tropical rain forests.

  15. Spatial and temporal patterns of cloud cover and fog inundation in coastal California: Ecological implications

    Science.gov (United States)

    Rastogi, Bharat; Williams, A. Park; Fischer, Douglas T.; Iacobellis, Sam F.; McEachern, A. Kathryn; Carvalho, Leila; Jones, Charles Leslie; Baguskas, Sara A.; Still, Christopher J.

    2016-01-01

    The presence of low-lying stratocumulus clouds and fog has been known to modify biophysical and ecological properties in coastal California where forests are frequently shaded by low-lying clouds or immersed in fog during otherwise warm and dry summer months. Summer fog and stratus can ameliorate summer drought stress and enhance soil water budgets, and often have different spatial and temporal patterns. Here we use remote sensing datasets to characterize the spatial and temporal patterns of cloud cover over California’s northern Channel Islands. We found marine stratus to be persistent from May through September across the years 2001-2012. Stratus clouds were both most frequent and had the greatest spatial extent in July. Clouds typically formed in the evening, and dissipated by the following early afternoon. We present a novel method to downscale satellite imagery using atmospheric observations and discriminate patterns of fog from those of stratus and help explain patterns of fog deposition previously studied on the islands. The outcomes of this study contribute significantly to our ability to quantify the occurrence of coastal fog at biologically meaningful spatial and temporal scales that can improve our understanding of cloud-ecosystem interactions, species distributions and coastal ecohydrology.

  16. Temporal and spatial patterns in the abundance of jellyfish in the ...

    African Journals Online (AJOL)

    There has been debate in the literature about whether jellyfish abundance has increased in the northern Benguela upwelling system, or not, over the past five decades and what impact they are having on pelagic fish. Here we review old expedition literature as well as more recent spatial and temporal patterns in distribution ...

  17. Citizen science: A new perspective to advance spatial pattern evaluation in hydrology.

    Science.gov (United States)

    Koch, Julian; Stisen, Simon

    2017-01-01

    Citizen science opens new pathways that can complement traditional scientific practice. Intuition and reasoning often make humans more effective than computer algorithms in various realms of problem solving. In particular, a simple visual comparison of spatial patterns is a task where humans are often considered to be more reliable than computer algorithms. However, in practice, science still largely depends on computer based solutions, which inevitably gives benefits such as speed and the possibility to automatize processes. However, the human vision can be harnessed to evaluate the reliability of algorithms which are tailored to quantify similarity in spatial patterns. We established a citizen science project to employ the human perception to rate similarity and dissimilarity between simulated spatial patterns of several scenarios of a hydrological catchment model. In total, the turnout counts more than 2500 volunteers that provided over 43000 classifications of 1095 individual subjects. We investigate the capability of a set of advanced statistical performance metrics to mimic the human perception to distinguish between similarity and dissimilarity. Results suggest that more complex metrics are not necessarily better at emulating the human perception, but clearly provide auxiliary information that is valuable for model diagnostics. The metrics clearly differ in their ability to unambiguously distinguish between similar and dissimilar patterns which is regarded a key feature of a reliable metric. The obtained dataset can provide an insightful benchmark to the community to test novel spatial metrics.

  18. A descriptive analysis of temporal and spatial patterns of variability in Puget Sound oceanographic properties

    Science.gov (United States)

    Stephanie Moore; Nathan J. Mantua; Jan A. Newton; Mitsuhiro Kawase; Mark J. Warner; Jonathan P. Kellogg

    2008-01-01

    Temporal and spatial patterns of variability in Puget Sound's oceanographic properties are determined using continuous vertical profile data from two long-term monitoring programs; monthly observations at 16 stations from 1993 to 2002, and biannual observations at 40 stations from 1998 to 2003. Climatological monthly means of temperature, salinity, and density...

  19. Spatial optimization of the pattern of fuel management activities and subsequent effects on simulated wildfires

    Science.gov (United States)

    Young-Hwan Kim; Pete Bettinger; Mark Finney

    2009-01-01

    Methods for scheduling forest management activities in a spatial pattern (dispersed, clumped, random, and regular) are presented, with the intent to examine the effects of placement of activities on resulting simulated wildfire behavior. Both operational and fuel reduction management prescriptions are examined, and a heuristic was employed to schedule the activities....

  20. International research to monitor sustainable forest spatial patterns: proceedings of the 2005 IUFRO World Congress symposium

    Science.gov (United States)

    Kurt Riitters; Christine Estreguil

    2007-01-01

    Presentations from the symposium "International Research to Monitor Sustainable Forest Spatial Patterns," which was organized as part of the International Union of Forest Research Organizations (IUFRO) World Congress in August 2005, are summarized in this report. The overall theme of the World Congress was "Forests in the Balance: Linking Tradition and...

  1. Simulation of changes in the spatial pattern of land use in China

    NARCIS (Netherlands)

    Verburg, P.H.; Veldkamp, A.; Fresco, L.O.

    1999-01-01

    This paper presents a model for simulating country-wide changes in the land use pattern of China. It is based upon an empirical analysis of the spatial distribution of land use types in China which takes into account socioeconomic as well as geophysical variables. The empirical analysis indicates

  2. Spatial Activity and Labour Market Patterns: A Connectivity Analysis of Commuting Flows in Germany

    NARCIS (Netherlands)

    Russo, G.; Reggiani, A.; Nijkamp, P.

    2007-01-01

    The spatial activity patterns of firms in a multi-regional system are closely connected with the structure and evolution of regional labour markets. Based on an extensive data set (cross-section) on commuting flows in Germany, this paper aims to identify the relationship between entrepreneurial

  3. Does Encope emarginata (Echinodermata: Echinoidea) affect spatial variation patterns of estuarine subtidal meiofauna and microphytobenthos?

    Science.gov (United States)

    Brustolin, Marco C.; Thomas, Micheli C.; Mafra, Luiz L.; Lana, Paulo da Cunha

    2014-08-01

    Foraging macrofauna, such as the sand dollar Encope emarginata, can modify sediment properties and affect spatial distribution patterns of microphytobenthos and meiobenthos at different spatial scales. We adopted a spatial hierarchical approach composed of five spatial levels (km, 100 s m, 10 s m, 1 s m and cm) to describe variation patterns of microphytobenthos, meiobenthos and sediment variables in shallow subtidal regions in the subtropical Paranaguá Bay (Southern Brazil) with live E. emarginata (LE), dead E. emarginata (only skeletons - (DE), and no E. emarginata (WE). The overall structure of microphytobenthos and meiofauna was always less variable at WE and much of variation at the scale of 100 s m was related to variability within LE and DE, due to foraging activities or to the presence of shell hashes. Likewise, increased variability in chlorophyll-a and phaeopigment contents was observed among locations within LE, although textural parameters of sediment varied mainly at smaller scales. Variations within LE were related to changes on the amount and quality of food as a function of sediment heterogeneity induced by the foraging behavior of sand dollars. We provide strong evidence that top-down effects related to the occurrence of E. emarginata act in synergy with bottom-up structuring related to hydrodynamic processes in determining overall benthic spatial variability. Conversely, species richness is mainly influenced by environmental heterogeneity at small spatial scales (centimeters to meters), which creates a mosaic of microhabitats.

  4. Web-based GIS for spatial pattern detection: application to malaria incidence in Vietnam.

    Science.gov (United States)

    Bui, Thanh Quang; Pham, Hai Minh

    2016-01-01

    There is a great concern on how to build up an interoperable health information system of public health and health information technology within the development of public information and health surveillance programme. Technically, some major issues remain regarding to health data visualization, spatial processing of health data, health information dissemination, data sharing and the access of local communities to health information. In combination with GIS, we propose a technical framework for web-based health data visualization and spatial analysis. Data was collected from open map-servers and geocoded by open data kit package and data geocoding tools. The Web-based system is designed based on Open-source frameworks and libraries. The system provides Web-based analyst tool for pattern detection through three spatial tests: Nearest neighbour, K function, and Spatial Autocorrelation. The result is a web-based GIS, through which end users can detect disease patterns via selecting area, spatial test parameters and contribute to managers and decision makers. The end users can be health practitioners, educators, local communities, health sector authorities and decision makers. This web-based system allows for the improvement of health related services to public sector users as well as citizens in a secure manner. The combination of spatial statistics and web-based GIS can be a solution that helps empower health practitioners in direct and specific intersectional actions, thus provide for better analysis, control and decision-making.

  5. Multisensor analyzer detector (MSAD) for low cost chemical and aerosol detection and pattern fusion

    Science.gov (United States)

    Swanson, David C.; Merdes, Daniel W.; Lysak, Daniel B., Jr.; Curtis, Richard C.; Lang, Derek C.; Mazzara, Andrew F.; Nicholas, Nicholas C.

    2002-08-01

    MSAD is being developed as a low-cost point detection chemical and biological sensor system designed around an information fusion inference engine that also allows additional sensors to be included in the detection process. The MSAD concept is based on probable cause detection of hazardous chemical vapors and aerosols of either chemical or biological composition using a small portable unit containing an embedded computer system and several integrated sensors with complementary capabilities. The configuration currently envisioned includes a Surface-Enhanced Raman Spectroscopy (SERS) sensor of chemical vapors and a detector of respirable aerosols based on Fraunhofer diffraction. Additional sensors employing Ion Mobility Spectrometry (IMS), Surface Acoustic Wave (SAW) detection, Flame Photometric Detection (FPD), and other principles are candidates for integration into the device; also, available commercial detectors implementing IMS, SAW, and FPD will be made accessible to the unit through RS232 ports. Both feature and decision level information fusion is supported using a Continuous Inference Network (CINET) of fuzzy logic. Each class of agents has a unique CINET with information inputs from a number of available sensors. Missing or low confidence sensor information is gracefully blended out of the output confidence for the particular agent. This approach constitutes a plug and play arrangement between the sensors and the information pattern recognition algorithms. We are currently doing simulant testing and developing out CINETs for actual agent testing at Edgewood Chemical and Biological Center (ECBC) later this year.

  6. Analyzing Lifestyle and Consumption Pattern of Hire Groups under Product Service Systems in Taiwan

    Directory of Open Access Journals (Sweden)

    Jui-Che Tu

    2013-01-01

    Full Text Available This study explores the characteristics of rental goods, integrates the green concept in the design and development, and introduces the concept of product service into the rental consumption trend in Taiwan. This study takes the questionnaire survey to collect various opinions of the consumers to rental consumption and also classifies the Taiwanese consumers into five clusters based on the life styles, and the names of clusters are simple financial management cluster, environment and taste cluster, fashionable and flexible cluster, careful purchase cluster, and smart consumption cluster. Finally, conclusions are as follows. (1 The green consumption cognition and attitude of the consumers to the environmental goods can help to master the factor of green consumption property for developing the rental commodities. (2 The market segmentation of the rental consumption market can be enhanced by the variables of available life styles. (3 The applications with product service rental characteristics should take the opinion feedback of the consumers into the sustainable product development conditions and expand the service property of the product. (4 As the cost of cradle-to-cradle recycling pattern is high, the support and promotion of the government can help to construct the business model of product service rental consumption and develop the rental economy.

  7. Bilinear common spatial pattern for single-trial ERP-based rapid serial visual presentation triage.

    Science.gov (United States)

    Yu, K; Shen, K; Shao, S; Ng, W C; Li, X

    2012-08-01

    Common spatial pattern (CSP) analysis is a useful tool for the feature extraction of event-related potentials (ERP). However, CSP is essentially time invariant, and thus unable to exploit the temporal information of ERP. This paper proposes a variant of CSP, namely bilinear common spatial pattern (BCSP), which is capable of accommodating both spatial and temporal information. BCSP generalizes CSP through iteratively optimizing bilinear filters. These bilinear filters constitute a spatio-temporal subspace in which the separation between two conditions is maximized. The method is unique in the sense that it is mathematically intuitive and simple, as all the bilinear filters are obtained by maximizing the power ratio as CSP does. The proposed method was evaluated on 20 subjects' ERP data collected in rapid serial visual presentation triage experiments. The results show that BCSP achieved significantly higher average test accuracy (12.3% higher, p < 0.001).

  8. Spatial statistics detect clustering patterns of kidney diseases in south-eastern Romania

    Directory of Open Access Journals (Sweden)

    Ruben I.

    2016-02-01

    Full Text Available Medical geography was conceptualized almost ten years ago due to its obvious usefulness in epidemiological research. Still, numerous diseases in many regions were neglected in these aspects of research, and the prevalence of kidney diseases in Eastern Europe is such an example. We evaluated the spatial patterns of main kidney diseases in south-eastern Romania, and highlighted the importance of spatial modeling in medical management in Romania. We found two statistically significant hotspots of kidney diseases prevalence. We also found differences in the spatial patterns between categories of diseases. We propose to speed up the process of creating a national database of records on kidney diseases. Offering the researchers access to a national database will allow further epidemiology studies in Romania and finally lead to a better management of medical services.

  9. A Studentized Permutation Test for the Comparison of Spatial Point Patterns

    DEFF Research Database (Denmark)

    Hahn, Ute

    A new test is proposed for the hypothesis that two (or more) observed point patterns are realizations of the same spatial point process model. To this end, the point patterns are divided into disjoint quadrats, on each of which an estimate of Ripley's K-function is calculated. The two groups...... of empirical K-functions are compared by a permutation test using a studentized test statistic. The proposed test performs convincingly in terms of empirical level and power in a simulation study, even for point patterns where the K-function estimates on neighboring subsamples are not strictly exchangeable...

  10. Spatial Pattern of Verticillium dahliae Microsclerotia and Cotton Plants with Wilt Symptoms in Commercial Plantations.

    Directory of Open Access Journals (Sweden)

    Feng Wei

    Full Text Available Spatial patterns of pathogen inoculum in field soils and the resulting patterns of disease may reflect the underlying mechanisms of pathogen dispersal. This knowledge can be used to design more efficient sampling schemes for assessing diseases. Spatial patterns of Verticillium dahliae microsclerotia were characterized in commercial cotton fields through quadrat and point sampling in 1994 and 2013, respectively. Furthermore, cotton plants with wilt symptoms, caused by V. dahliae, were assessed in six commercial cotton fields in 2013. Soil samples were assayed for the density of microsclerotia (expressed as CFU g-1 of soil using a wet-sieving plating method and a real-time quantitative PCR method for the 1994 and 2013 study, respectively. The estimated inoculum threshold for causing wilt development on individual plants varied with the three fields: ca. 1.6 CFU g-1 of soil for one field, and 7.2 CFU g-1 of soil for the other two. Both quadrat and point sampling spatial analyses showed that aggregation of V. dahliae inoculum in soils was usually not detected beyond 1.0 m. Similarly, the spatial patterns of wilted cotton plants indicated that spatial aggregation of diseased plants were only observed below the scale of 1.0 m in six commercial cotton plantations. Therefore, spatial aggregation of both V. dahliae inoculum and cotton plants with wilt symptoms is not likely to be detected above the scale of 1.0 m for most commercial cotton plantations. When designing schemes for assessing wilt inoculum and wilt development, this scale needs to be taken into consideration.

  11. Eigenvector centrality mapping for analyzing connectivity patterns in fMRI data of the human brain.

    Directory of Open Access Journals (Sweden)

    Gabriele Lohmann

    Full Text Available Functional magnetic resonance data acquired in a task-absent condition ("resting state" require new data analysis techniques that do not depend on an activation model. In this work, we introduce an alternative assumption- and parameter-free method based on a particular form of node centrality called eigenvector centrality. Eigenvector centrality attributes a value to each voxel in the brain such that a voxel receives a large value if it is strongly correlated with many other nodes that are themselves central within the network. Google's PageRank algorithm is a variant of eigenvector centrality. Thus far, other centrality measures - in particular "betweenness centrality" - have been applied to fMRI data using a pre-selected set of nodes consisting of several hundred elements. Eigenvector centrality is computationally much more efficient than betweenness centrality and does not require thresholding of similarity values so that it can be applied to thousands of voxels in a region of interest covering the entire cerebrum which would have been infeasible using betweenness centrality. Eigenvector centrality can be used on a variety of different similarity metrics. Here, we present applications based on linear correlations and on spectral coherences between fMRI times series. This latter approach allows us to draw conclusions of connectivity patterns in different spectral bands. We apply this method to fMRI data in task-absent conditions where subjects were in states of hunger or satiety. We show that eigenvector centrality is modulated by the state that the subjects were in. Our analyses demonstrate that eigenvector centrality is a computationally efficient tool for capturing intrinsic neural architecture on a voxel-wise level.

  12. Total ozone patterns over the northern mid-latitudes: spatial correlations, extreme events and dynamical contributions

    Science.gov (United States)

    Rieder, H. E.; Staehelin, J.; Maeder, J. A.; Ribatet, M.; Bodeker, G. E.; Davison, A. C.

    2009-04-01

    Tools from geostatistics and extreme value theory are applied to analyze spatial correlations in total ozone for the northern mid-latitudes. The dataset used in this study is the NIWA combined total ozone dataset (Bodeker et al., 2001; Müller et al., 2008). New tools from extreme value theory (Coles, 2001; Ribatet, 2007) have recently been applied to the world's longest total ozone record from Arosa, Switzerland (e.g. Staehelin 1998a,b), in order to describe extreme events in low and high total ozone (Rieder et al., 200x). Within the current study, patterns in spatial correlation and frequency distributions of extreme events (e.g. ELOs and EHOs) are studied for the northern mid-latitudes. New insights in spatial patterns of total ozone for the northern mid-latitudes are presented. Koch et al. (2005) found that the increase in fast isentropic transport of tropical air to northern mid-latitudes contributed significantly to ozone changes between 1980 and 1989. Within this study the influence of changes in atmospheric dynamics (e.g. tropospheric and lower stratospheric pressure systems) on column ozone over the northern mid-latitudes is analyzed for the time period 1979-2007. References: Bodeker, G.E., J.C. Scott, K. Kreher, and R.L. McKenzie, Global ozone trends in potential vorticity coordinates using TOMS and GOME intercompared against the Dobson network: 1978-1998, J. Geophys. Res., 106 (D19), 23029-23042, 2001. Coles, S.: An Introduction to Statistical Modeling of Extreme Values, Springer Series in Statistics, ISBN:1852334592, Springer, Berlin, 2001. Koch, G., H. Wernli, C. Schwierz, J. Staehelin, and T. Peter (2005), A composite study on the structure and formation of ozone miniholes and minihighs over central Europe, Geophys. Res. Lett., 32, L12810, doi:10.1029/2004GL022062. Müller, R., Grooß, J.-U., Lemmen, C., Heinze, D., Dameris, M., and Bodeker, G.: Simple measures of ozone depletion in the polar stratosphere, Atmos. Chem. Phys., 8, 251-264, 2008. Ribatet

  13. A Multi-scale Method for Mining Significant Spatial Co-location Patterns

    Directory of Open Access Journals (Sweden)

    HE Zhanjun

    2016-11-01

    Full Text Available Spatial co-location patterns discovery aims to detect spatial features whose instances are frequently located in geographic proximity. Such patterns can reveal unknown regularity in geographic phenomena and they are helpful for decision-making. However, due to the little prior knowledge, it is difficult to specify thresholds for neighbor distance and prevalence index.As a result, the outcomes of most algorithms always include insignificant or even erroneous patterns. A pattern-reconstruction-based approach was proposed to discover only significant co-location patterns. Firstly, we introduce a new definition of MNND, which can identify the lower and upper bounds of neighbor distance threshold. Then, a null model was constructed based on the pattern reconstruction. On basis of that, selection of prevalence threshold is replaced by hypothesis testing. Finally, significant colocation patterns were mined at multiple distances and the results were evaluated by the notion of lifetime. The experimental results show that our approach could avoid the subjectivity in determining those thresholds, thereby improving the correctness and robustness.

  14. Using climate, energy, and spatial-based hypotheses to interpret macroecological patterns of North America chelonians

    Science.gov (United States)

    Ennen, Joshua R.; Agha, Mickey; Matamoros, Wilfredo A.; Hazzard, Sarah C.; Lovich, Jeffrey E.

    2016-01-01

    Our study investigates how factors, such as latitude, productivity, and several environmental variables, influence contemporary patterns of the species richness in North American turtles. In particular, we test several hypotheses explaining broad-scale species richness patterns on several species richness data sets: (i) total turtles, (ii) freshwater turtles only, (iii) aquatic turtles, (iv) terrestrial turtles only, (v) Emydidae, and (vi) Kinosternidae. In addition to spatial data, we used a combination of 25 abiotic variables in spatial regression models to predict species richness patterns. Our results provide support for multiple hypotheses related to broad-scale patterns of species richness, and in particular, hypotheses related to climate, productivity, water availability, topography, and latitude. In general, species richness patterns were positively associated with temperature, precipitation, diversity of streams, coefficient of variation of elevation, and net primary productivity. We also found that North America turtles follow the general latitudinal diversity gradient pattern (i.e., increasing species richness towards equator) by exhibiting a negative association with latitude. Because of the incongruent results among our six data sets, our study highlights the importance of considering phylogenetic constraints and guilds when interpreting species richness patterns, especially for taxonomic groups that occupy a myriad of habitats.

  15. A statistical model for spatial patterns of Buruli ulcer in the Amansie West district, Ghana

    Science.gov (United States)

    Duker, Alfred A.; Stein, Alfred; Hale, Martin

    2006-06-01

    Buruli ulcer (BU), a skin ulceration caused by Mycobacterium ulcerans (MU), is the second most widespread mycobacterium infection in Ghana. Its infection pathway is possibly related to the potable and agricultural water supply. This study aims to identify environmental factors that influence infection in a part of Ghana. It examines the significance of contaminated surface drainage channels and groundwater using conditional autoregressive (CAR) statistical modelling. This type of modelling implies that the spatial pattern of BU incidence in one community depends on the influence of the environment in neighbouring communities. Covariates were included to assess the spatial relationship between environmental risk factors and BU incidence in the study area. The study reveals an association between (a) the mean As content of soil and spatial distribution of BU and (b) the distance to sites of gold mining and spatial distribution of BU. We conclude that both arsenic in the natural environment and gold mining influence BU infection.

  16. [Spatial and temporal variation patterns in aquatic macroinvertebrates of Tecocomulco Lake, Hidalgo (México)].

    Science.gov (United States)

    Rico-Sánchez, Axel Eduardo; Rodríguez-Romero, Alexis Joseph; López-López, Eugenia; Sedeño-Díaz, Jacinto Elías

    2014-04-01

    Lake Tecocomulco, Hidalgo, is a relic of the ancient lakes ofAnahuac, important for the conservation of resident and migratory birds. However, the composition of aquatic macroinvertebrates is unknown; this is an important gap in conservation as they play an important role in the food web. This study analyzed the spatial and temporal variations in macroinvertebrate assemblages and their relationship with habitat characteristics. We carried out four monitoring campaigns covering the rainy and dry seasons. The monitoring was conducted at six study sites (four in the littoral zone and two in the middle part of the lake), environmental factors were recorded at each study site, water samples were collected for their physical and chemical analysis and aquatic macroinvertebrates were collected. A principal component analysis (PCA) was used to group study sites based on physical and chemical characteristics. Richness of taxa was analysed with rarefaction. We assessed the importance value index of each taxon (considering their frequency of occurrence and abundance). Similarity analyzes were performed between study sites and similarity of taxa with indices of Jaccard and Bray-Curtis, respectively. We performed a canonical correspondence analysis (CCA) between environmental factors and macroinvertebrate taxa. The PCA showed a marked seasonal variation represented by warm periods, with high values of conductivity, alkalinity, hardness, sulfates, and macronutrients (N and P) and the cold period with low values. We found a total of 26 taxa of aquatic macroinvertebrates and the highest richness was found in August. The Jaccard similarity analysis found differences between the littoral area and the limnetic zone, which differ also in the composition of macrophytes. The littoral zone had the highest taxa richness of macroinvertebrates and macrophytes, while the lowest diversity was found in the offshore zone. The CCA related physicochemical characteristics of the water body with

  17. Spatial patterns of giant sequoia (Sequoiadendron giganteum) in two sequoia groves in Sequoia National Park, California

    Science.gov (United States)

    Stohlgren, Thomas J.

    1993-01-01

    Although Muir Grove and Castle Creek Grove are similar in area, elevation, and number of giant sequoias, various spatial pattern analysis techniques showed that they had dissimilar spatial patterns for similar-sized trees. Two-dimensional and transect two-term local quadrat variance techniques detected general trends in the spatial patterns of different-sized trees, detected multiple-scale patterns within individual size classes, and provided information on the scale and intensity of patches of individual size classes of trees in Muir and Castle Creek groves. In Muir Grove, midsized sequoias (1.5 to 2.4 m DBH classes) had major pattern scales 350–450 m in diameter, whereas the same-sized trees in Castle Creek Grove had pattern scales >1000 m in diameter. Many size classes of trees had minor patches superimposed on larger scale patterns in both groves. There may be different recruitment patterns in core (i.e., central) areas compared with peripheral areas of sequoia groves; core areas of both groves had more small live sequoias and dead sequoias than peripheral areas of the groves. Higher densities of sequoias and, perhaps, more rapid turnover of individuals in core areas may indicate (i) differences in disturbance histories and favorability of microsites in the core and peripheral areas of groves; (ii) different responses to disturbance due to shifts in the species composition of the stand and thus, the relative influences of intra- to inter-specific competition; or (iii) slower growth or lower survivorship rates in marginal habitat (i.e., peripheral areas).

  18. Simple agarose micro-confinement array and machine-learning-based classification for analyzing the patterned differentiation of mesenchymal stem cells.

    Directory of Open Access Journals (Sweden)

    Nobuyuki Tanaka

    Full Text Available The geometrical confinement of small cell colonies gives differential cues to cells sitting at the periphery versus the core. To utilize this effect, for example to create spatially graded differentiation patterns of human mesenchymal stem cells (hMSCs in vitro or to investigate underpinning mechanisms, the confinement needs to be robust for extended time periods. To create highly repeatable micro-fabricated structures for cellular patterning and high-throughput data mining, we employed here a simple casting method to fabricate more than 800 adhesive patches confined by agarose micro-walls. In addition, a machine learning based image processing software was developed (open code to detect the differentiation patterns of the population of hMSCs automatically. Utilizing the agarose walls, the circular patterns of hMSCs were successfully maintained throughout 15 days of cell culture. After staining lipid droplets and alkaline phosphatase as the markers of adipogenic and osteogenic differentiation, respectively, the mega-pixels of RGB color images of hMSCs were processed by the software on a laptop PC within several minutes. The image analysis successfully showed that hMSCs sitting on the more central versus peripheral sections of the adhesive circles showed adipogenic versus osteogenic differentiation as reported previously, indicating the compatibility of patterned agarose walls to conventional microcontact printing. In addition, we found a considerable fraction of undifferentiated cells which are preferentially located at the peripheral part of the adhesive circles, even in differentiation-inducing culture media. In this study, we thus successfully demonstrated a simple framework for analyzing the patterned differentiation of hMSCs in confined microenvironments, which has a range of applications in biology, including stem cell biology.

  19. Patterns of allozyme variation in diploid and tetraploid Centaurea jacea at different spatial scales.

    Science.gov (United States)

    Hardy, O J; Vekemans, X

    2001-05-01

    The extent and spatial patterns of genetic variation at allozyme markers were investigated within and between diploid and autotetraploid knapweeds (Centaurea jacea L. sensu lato, Asteraceae) at contrasted geographic scales: (1) among populations sampled from a diploid-tetraploid contact zone in the northeastern part of the Belgian Ardennes, and (2) within mixed populations from that zone where diploids and tetraploids coexist. Our data were also compared with a published dataset by Sommer (1990) describing allozyme variation in separate diploid and tetraploid knapweeds populations collected throughout Europe. Genetic diversity was higher in tetraploids. In the Belgian Ardennes and within the mixed populations, both cytotypes had similar levels of spatial genetic structure, they were genetically differentiated, and their distributions of allele frequencies were not spatially correlated. In contrast, at the European scale, diploids and tetraploids did not show differentiated gene pools and presented a strong correlation between their patterns of spatial genetic variation. Numerical simulations showed that the striking difference in patterns observed at small and large geographic scales could be accounted for by a combination of (1) isolation by distance within cytotypes; and (2) partial reproductive barriers between cytotypes and/or recurrent formation of tetraploids. We suggest that this may explain the difficulty of the taxonomic treatment of knapweeds and of polyploid complexes in general.

  20. Are neighborhood sociocultural factors influencing the spatial pattern of gonorrhea in North Carolina?

    Science.gov (United States)

    Sullivan, Ashleigh B; Gesink, Dionne C; Brown, Patrick; Zhou, Lutong; Kaufman, Jay S; Fitch, Molly; Serre, Marc L; Miller, William C

    2011-04-01

    To determine if the spatial pattern of gonorrhea observed for North Carolina was influenced by neighborhood-level sociocultural determinants of health, including race/ethnicity. A generalized linear mixed model with spatially correlated random effects was fit to measure the influence of socio-cultural factors on the spatial pattern of gonorrhea reported to the North Carolina State Health Department (January 1, 2005 to March 31, 2008). Neighborhood gonorrhea rates increased as the percent single mothers increased (25th to 75th neighborhood percentile Relative Rate 1.18, 95% CI 1.12, 1.25), and decreased as socioeconomic status increased (Relative Rate 0.89, 95% CI 0.84, 0.95). Increasing numbers of men in neighborhoods with more women than men did not change the gonorrhea rate, but was associated with decreased rates in neighborhoods with more men than women. Living in the mountains was protective for all race/ethnicities. Rurality was associated with decreased rates for Blacks and increased rates for Native Americans outside the mountains. Neighborhood-level sociocultural factors, primarily those indicative of neighborhood deprivation, explained a significant proportion of the spatial pattern of gonorrhea in both urban and rural communities. Race/ethnicity was an important proxy for social and cultural factors not captured by measures of socioeconomic status. Copyright © 2011 Elsevier Inc. All rights reserved.

  1. Mechanism Underlying the Spatial Pattern Formation of Dominant Tree Species in a Natural Secondary Forest.

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    Guodong Jia

    Full Text Available Studying the spatial pattern of plant species may provide significant insights into processes and mechanisms that maintain stand stability. To better understand the dynamics of naturally regenerated secondary forests, univariate and bivariate Ripley's L(r functions were employed to evaluate intra-/interspecific relationships of four dominant tree species (Populus davidiana, Betula platyphylla, Larix gmelinii and Acer mono and to distinguish the underlying mechanism of spatial distribution. The results showed that the distribution of soil, water and nutrients was not fragmented but presented clear gradients. An overall aggregated distribution existed at most distances. No correlation was found between the spatial pattern of soil conditions and that of trees. Both positive and negative intra- and interspecific relationships were found between different DBH classes at various distances. Large trees did not show systematic inhibition of the saplings. By contrast, the inhibition intensified as the height differences increased between the compared pairs. Except for Larix, universal inhibition of saplings by upper layer trees occurred among other species, and this reflected the vertical competition for light. Therefore, we believe that competition for light rather than soil nutrients underlies the mechanism driving the formation of stand spatial pattern in the rocky mountainous areas examined.

  2. INVESTIGATION AND EVALUATION OF SPATIAL PATTERNS IN TABRIZ PARKS USING LANDSCAPE METRICS

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    Ali Majnouni Toutakhane

    2016-01-01

    Full Text Available Nowadays, the green spaces in cities and especially metropolises have adopted a variety of functions. In addition to improving the environmental conditions, they are suitable places for spending free times and mitigating nervous pressures of the machinery life based on their distribution and dispersion in the cities. In this research, in order to study the spatial distribution and composition of the parks and green spaces in Tabriz metropolis, the map of Parks prepared using the digital atlas of Tabriz parks and Arc Map and IDRISI softwares. Then, quantitative information of spatial patterns of Tabriz parks provided using Fragstats software and a selection of landscape metrics including: the area of class, patch density, percentage of landscape, average patch size, average patch area, largest patch index, landscape shape index, average Euclidean distance of the nearest neighborhood and average index of patch shape. Then the spatial distribution, composition, extent and continuity of the parks was evaluated. Overall, only 8.5 percent of the landscape is assigned to the parks, and they are studied in three classes of neighborhood, district and regional parks. Neighborhood parks and green spaces have a better spatial distribution pattern compared to the other classes and the studied metrics showed better results for this class. In contrast, the quantitative results of the metrics calculated for regional parks, showed the most unfavorable spatial status for this class of parks among the three classes studied in Tabriz city.

  3. A Spatial Energy Balance Index to Analyze Geodetic and Seismic Time Series: The Eastern Flank of Mt. Etna Case Study

    Science.gov (United States)

    Cannavo', Flavio; Arena, Alessandra; Mattia, Mario; Monaco, Carmelo

    2013-04-01

    In line with the aim of analyzing multivariate datasets, in this paper we propose a new methodology to merge different types of instrumental data, such as deformation data and seismic data, in order to extract and compare the common information about earthquake cycles. In particular, the development of large Continuously-operating Global Positioning System (CGPS) networks in recent years, has allowed measuring detailed surface deformations, generally used to obtain information on the strain accumulation along fault systems. The challenge is to combine the geodetic information coming from the CGPS networks with the seismic data from the earthquake databases. Here, we propose a Spatial Energy Balance Index (SEBI) which takes into account the accumulated geodetic strain and the seismically-released strain to quantify a balance of the energies, according to the elastic rebound theory. Indeed, a fault, being subjected to force and shift, accumulates energy and slowly deforms until its internal strength is exceeded, then releasing the accumulated energy. The proposed index synthesizes the energy state of an area, revealing possible dynamics of earthquake occurrences. Furthermore, the paper sets out a novel technique for GPS displacement interpolation. The interpolation takes into account the GPS network topology and the topography effects to estimate the continuous displacement field at the surface. The technique is a combination of techniques coming from soft-computing algorithms; in particular, it is based on Cellular Automata and Artificial Neural Networks. The whole process of data interpolation and index setting is mainly data-driven and consists of two steps: the first of model identification and a second step of testing. The proposed approach was applied to the Eastern flank of Mt. Etna (Italy) for the period 2008-2012. Results quantify the energy state of different faults of the Mt. Etna's Eastern flank.

  4. Post-fire spatial patterns of soil nitrogen mineralization and microbial abundance.

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    Erica A H Smithwick

    Full Text Available Stand-replacing fires influence soil nitrogen availability and microbial community composition, which may in turn mediate post-fire successional dynamics and nutrient cycling. However, fires create patchiness at both local and landscape scales and do not result in consistent patterns of ecological dynamics. The objectives of this study were to (1 quantify the spatial structure of microbial communities in forest stands recently affected by stand-replacing fire and (2 determine whether microbial variables aid predictions of in situ net nitrogen mineralization rates in recently burned stands. The study was conducted in lodgepole pine (Pinus contorta var. latifolia and Engelmann spruce/subalpine fir (Picea engelmannii/Abies lasiocarpa forest stands that burned during summer 2000 in Greater Yellowstone (Wyoming, USA. Using a fully probabilistic spatial process model and Bayesian kriging, the spatial structure of microbial lipid abundance and fungi-to-bacteria ratios were found to be spatially structured within plots two years following fire (for most plots, autocorrelation range varied from 1.5 to 10.5 m. Congruence of spatial patterns among microbial variables, in situ net N mineralization, and cover variables was evident. Stepwise regression resulted in significant models of in situ net N mineralization and included variables describing fungal and bacterial abundance, although explained variance was low (R²<0.29. Unraveling complex spatial patterns of nutrient cycling and the biotic factors that regulate it remains challenging but is critical for explaining post-fire ecosystem function, especially in Greater Yellowstone, which is projected to experience increased fire frequencies by mid 21(st Century.

  5. Spatial patterns of microbial diversity and activity in an aged creosote-contaminated site

    Science.gov (United States)

    Mukherjee, Shinjini; Juottonen, Heli; Siivonen, Pauli; Lloret Quesada, Cosme; Tuomi, Pirjo; Pulkkinen, Pertti; Yrjälä, Kim

    2014-01-01

    Restoration of polluted sites via in situ bioremediation relies heavily on the indigenous microbes and their activities. Spatial heterogeneity of microbial populations, contaminants and soil chemical parameters on such sites is a major hurdle in optimizing and implementing an appropriate bioremediation regime. We performed a grid-based sampling of an aged creosote-contaminated site followed by geostatistical modelling to illustrate the spatial patterns of microbial diversity and activity and to relate these patterns to the distribution of pollutants. Spatial distribution of bacterial groups unveiled patterns of niche differentiation regulated by patchy distribution of pollutants and an east-to-west pH gradient at the studied site. Proteobacteria clearly dominated in the hot spots of creosote pollution, whereas the abundance of Actinobacteria, TM7 and Planctomycetes was considerably reduced from the hot spots. The pH preferences of proteobacterial groups dominating in pollution could be recognized by examining the order and family-level responses. Acidobacterial classes came across as generalists in hydrocarbon pollution whose spatial distribution seemed to be regulated solely by the pH gradient. Although the community evenness decreased in the heavily polluted zones, basal respiration and fluorescein diacetate hydrolysis rates were higher, indicating the adaptation of specific indigenous microbial populations to hydrocarbon pollution. Combining the information from the kriged maps of microbial and soil chemistry data provided a comprehensive understanding of the long-term impacts of creosote pollution on the subsurface microbial communities. This study also highlighted the prospect of interpreting taxa-specific spatial patterns and applying them as indicators or proxies for monitoring polluted sites. PMID:25105905

  6. Spatial patterns of microbial diversity and activity in an aged creosote-contaminated site.

    Science.gov (United States)

    Mukherjee, Shinjini; Juottonen, Heli; Siivonen, Pauli; Lloret Quesada, Cosme; Tuomi, Pirjo; Pulkkinen, Pertti; Yrjälä, Kim

    2014-10-01

    Restoration of polluted sites via in situ bioremediation relies heavily on the indigenous microbes and their activities. Spatial heterogeneity of microbial populations, contaminants and soil chemical parameters on such sites is a major hurdle in optimizing and implementing an appropriate bioremediation regime. We performed a grid-based sampling of an aged creosote-contaminated site followed by geostatistical modelling to illustrate the spatial patterns of microbial diversity and activity and to relate these patterns to the distribution of pollutants. Spatial distribution of bacterial groups unveiled patterns of niche differentiation regulated by patchy distribution of pollutants and an east-to-west pH gradient at the studied site. Proteobacteria clearly dominated in the hot spots of creosote pollution, whereas the abundance of Actinobacteria, TM7 and Planctomycetes was considerably reduced from the hot spots. The pH preferences of proteobacterial groups dominating in pollution could be recognized by examining the order and family-level responses. Acidobacterial classes came across as generalists in hydrocarbon pollution whose spatial distribution seemed to be regulated solely by the pH gradient. Although the community evenness decreased in the heavily polluted zones, basal respiration and fluorescein diacetate hydrolysis rates were higher, indicating the adaptation of specific indigenous microbial populations to hydrocarbon pollution. Combining the information from the kriged maps of microbial and soil chemistry data provided a comprehensive understanding of the long-term impacts of creosote pollution on the subsurface microbial communities. This study also highlighted the prospect of interpreting taxa-specific spatial patterns and applying them as indicators or proxies for monitoring polluted sites.

  7. Spatial and temporal patterns of deforestation in Rio Cajarí Extrative Reserve, Amapá, Brazil.

    Science.gov (United States)

    Funi, Claudia; Paese, Adriana

    2012-01-01

    The Rio Cajarí Extractive Reserve (RCER) is a sustainable use protected area located in Southern Amapá state, Brazil. This protected area is home to traditional agro-extractive families, but has been increasingly invaded by commercial agriculture producers. In this work, we test the hypothesis that the RCER implementation has distinctly affected spatial patterns of deforestation and rates of bare soil and secondary forest formation by the social groups occupying the protected area and its surrounding area. Detailed maps of vegetation cover and deforestation were elaborated, based on Landsat TM images from 1991, 1998, 2007 and 2008 and Linear Spectral Mixture Models. Based on an extensive fieldwork, patches were classified according to the agents causing deforestation and characterized with ten explanatory variables. A discriminant function analysis was used to identify homogeneous groups based on the data. Results show increased rates and distinct spatial patterns of deforestation by three groups: extractivists, non traditional commercial agriculture producers, and a less representative group constituted of miners, cattle and timber producers. In all analyzed dates, clearings by the extrativist community presented the highest total area and smaller average sizes and were located in close proximity to villages. Deforestation patches by the non-traditional group were exclusively associated with ombrophilous forests; these presented higher average sizes and proximity indexes, and showed increased aggregation and large cluster formation. No significant differences were observed in deforestation patterns by the three groups inside or outside the reserve.

  8. Understanding the spatial pattern of urban crime: a developing country's perspective

    OpenAIRE

    Umar, F.; Cheshire, J.; Johnson, S.

    2015-01-01

    Much of the published spatial analysis research of crime to date has been focused on Euro-American cities. This paper attempts to provide an insight on how we can better understand the spatial pattern of crime in a typical developing country’s setting. Data were obtained through extensive field mapping, a block environmental inventory (BEI) and a crime victimization survey to generate a GIS-database of the study area. Grid thematic maps (GTM) for different crime types were produced for visual...

  9. Self-Organisation in Spatial Systems-From Fractal Chaos to Regular Patterns and Vice Versa.

    Directory of Open Access Journals (Sweden)

    Michal Banaszak

    Full Text Available This study offers a new perspective on the evolutionary patterns of cities or urban agglomerations. Such developments can range from chaotic to fully ordered. We demonstrate that in a dynamic space of interactive human behaviour cities produce a wealth of gravitational attractors whose size and shape depend on the resistance of space emerging inter alia from transport friction costs. This finding offers original insights into the complex evolution of spatial systems and appears to be consistent with the principles of central place theory known from the spatial sciences and geography. Our approach is dynamic in nature and forms a generalisation of hierarchical principles in geographic space.

  10. Defect Localization Capabilities of a Global Detection Scheme: Spatial Pattern Recognition Using Full-field Vibration Test Data in Plates

    Science.gov (United States)

    Saleeb, A. F.; Prabhu, M.; Arnold, S. M. (Technical Monitor)

    2002-01-01

    Recently, a conceptually simple approach, based on the notion of defect energy in material space has been developed and extensively studied (from the theoretical and computational standpoints). The present study focuses on its evaluation from the viewpoint of damage localization capabilities in case of two-dimensional plates; i.e., spatial pattern recognition on surfaces. To this end, two different experimental modal test results are utilized; i.e., (1) conventional modal testing using (white noise) excitation and accelerometer-type sensors and (2) pattern recognition using Electronic speckle pattern interferometry (ESPI), a full field method capable of analyzing the mechanical vibration of complex structures. Unlike the conventional modal testing technique (using contacting accelerometers), these emerging ESPI technologies operate in a non-contacting mode, can be used even under hazardous conditions with minimal or no presence of noise and can simultaneously provide measurements for both translations and rotations. Results obtained have clearly demonstrated the robustness and versatility of the global NDE scheme developed. The vectorial character of the indices used, which enabled the extraction of distinct patterns for localizing damages proved very useful. In the context of the targeted pattern recognition paradigm, two algorithms were developed for the interrogation of test measurements; i.e., intensity contour maps for the damaged index, and the associated defect energy vector field plots.

  11. Can inducible resistance in plants cause herbivore aggregations? Spatial patterns in an inducible plant/herbivore model.

    Science.gov (United States)

    Anderson, Kurt E; Inouye, Brian D; Underwood, Nora

    2015-10-01

    Many theories regarding the evolution of inducible resistance in plants have an implicit spatial component, but most relevant population dynamic studies ignore spatial dynamics. We examined a spatially explicit model of plant inducible resistance and herbivore population dynamics to explore how realistic features of resistance and herbivore responses influence spatial patterning. Both transient and persistent spatial patterns developed in all models examined, where patterns manifested as wave-like aggregations of herbivores and variation in induction levels. Patterns arose when herbivores moved away from highly induced plants, there was a lag between damage and deployment of induced resistance, and the relationship between herbivore density and strength of the induction response had a sigmoid shape. These mechanisms influenced pattern formation regardless of the assumed functional relationship between resistance and herbivore recruitment and mortality. However, in models where induction affected herbivore mortality, large-scale herbivore population cycles driven by the mortality response often co-occurred with smaller scale spatial patterns driven by herbivore movement. When the mortality effect dominated, however, spatial pattern formation was completely replaced by spatially synchronized herbivore population cycles. Our results present a new type of ecological pattern formation driven by induced trait variation, consumer behavior, and time delays that has broad implications for the community and evolutionary ecology of plant defenses.

  12. Freshwater fish’s spatial patterns in isolated water springs in North-eastern Mexico

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    Jorge Palacio-Núñez

    2010-03-01

    Full Text Available The Media Luna lake-spring was selected as representative of all thermal or no thermal springs in the zone of Valley of Rioverde, a semi-arid vegetation in the North-eastern of Mexico. This system is inhabited by 11 fish species, of which six are native. Four of the native species are endemic to the region and threatened due to touristic pressure and to the introduction of exotic species. The objectives were to determine the characteristics that influence the spatial distribution of the fish species, to analyze their spatial distribution patterns, and to describe the relationships between the different species. The general aim was to establish some basis for the conservation of these fish communities and their habitat. Several sessions were initiated in 1992 through direct observation. Later, between 1998 and 1999 five systematically seasonal sampling sessions were conducted (54 subaquatic transects/session. Finally, the data was updated by sampling in summer 2002 and winter 2006. Through the analysis was performed only for endemics of the region, like Ataeniobius toweri Meek, Cualac tessellatus Miller, Cichlasoma bartoni Bean and C. labridens Pellegrin, in at least one life stage, showed correlation with habitat variables or with other species. For these species, patterns of spatial aggregation and association with other species were observed. These results show a certain degree of specialization of endemic species to some microhabitat characteristics, as well as a significant interaction with other native species which they coexist. In addition, some significant relations between endemic and alien species suggest an antagonist relation. Management actions focused in the touristic use of the spring represent the main threat for these species, followed by an adequate management of exotic species. This study provides basis for future responsible management of these wetlands, where tourism and conservation can be combined. Rev. Biol. Trop. 58 (1

  13. Notifiable Sexually Transmitted Infections in China: Epidemiologic Trends and Spatial Changing Patterns

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    Bin Zhu

    2017-10-01

    Full Text Available Sexually transmitted infections (STIs have become one of the major public health threats to the sustainable development of human beings. Among all of the STIs in China, three are listed as the notifiable infectious diseases, i.e., gonorrhea, syphilis, and HIV/AIDS, which demand more attention. This study aims to detect, describe, and compare the spatial-temporal clustering of these notifiable STIs in China and to relate spatial analysis results to epidemiologic trends during the past decade. A descriptive epidemiology analysis and a spatial autocorrelation analysis (global and local are adopted to study the epidemiologic trends and spatial changing patterns of STIs respectively. The results indicated that there were regional disparities and spatial clusters in the spatial distribution of notifiable STIs in China. However, the incidence rates of the three notifiable STIs displayed relatively different characteristics in epidemiologic trends and the agglomeration level. Overall, the Yangtze River Delta region, the southwestern border area, and some other border regions are the places demanding more attention. In the end, we propose a three-dimensional prevention and control strategy, which focuses on not only the most-at-risk populations, but also the most-at-risk areas and most-at-risk timings. Besides, some measures targeting more than one STI should also be formulated.

  14. Spatially controlled simultaneous patterning of multiple growth factors in three-dimensional hydrogels

    Science.gov (United States)

    Wylie, Ryan G.; Ahsan, Shoeb; Aizawa, Yukie; Maxwell, Karen L.; Morshead, Cindi M.; Shoichet, Molly S.

    2011-10-01

    Three-dimensional (3D) protein-patterned scaffolds provide a more biomimetic environment for cell culture than traditional two-dimensional surfaces, but simultaneous 3D protein patterning has proved difficult. We developed a method to spatially control the immobilization of different growth factors in distinct volumes in 3D hydrogels, and to specifically guide differentiation of stem/progenitor cells therein. Stem-cell differentiation factors sonic hedgehog (SHH) and ciliary neurotrophic factor (CNTF) were simultaneously immobilized using orthogonal physical binding pairs, barnase-barstar and streptavidin-biotin, respectively. Barnase and streptavidin were sequentially immobilized using two-photon chemistry for subsequent concurrent complexation with fusion proteins barstar-SHH and biotin-CNTF, resulting in bioactive 3D patterned hydrogels. The technique should be broadly applicable to the patterning of a wide range of proteins.

  15. Motor imagery EEG classification with optimal subset of wavelet based common spatial pattern and kernel extreme learning machine.

    Science.gov (United States)

    Hyeong-Jun Park; Jongin Kim; Beomjun Min; Boreom Lee

    2017-07-01

    Performance of motor imagery based brain-computer interfaces (MI BCIs) greatly depends on how to extract the features. Various versions of filter-bank based common spatial pattern have been proposed and used in MI BCIs. Filter-bank based common spatial pattern has more number of features compared with original common spatial pattern. As the number of features increases, the MI BCIs using filter-bank based common spatial pattern can face overfitting problems. In this study, we used eigenvector centrality feature selection method, wavelet packet decomposition common spatial pattern, and kernel extreme learning machine to improve the performance of MI BCIs and avoid overfitting problems. Furthermore, the computational speed was improved by using kernel extreme learning machine.

  16. Spatial pattern affects diversity-productivity relationships in experimental meadow communities

    Science.gov (United States)

    Lamošová, Tereza; Doležal, Jiří; Lanta, Vojtěch; Lepš, Jan

    2010-05-01

    Plant species create aggregations of conspecifics as a consequence of limited seed dispersal, clonal growth and heterogeneous environment. Such intraspecific aggregation increases the importance of intraspecific competition relative to interspecific competition which may slow down competitive exclusion and promote species coexistence. To examine how spatial aggregation impacts the functioning of experimental assemblages of varying species richness, eight perennial grassland species of different growth form were grown in random and aggregated patterns in monocultures, two-, four-, and eight-species mixtures. In mixtures with an aggregated pattern, monospecific clumps were interspecifically segregated. Mixed model ANOVA was used to test (i) how the total productivity and productivity of individual species is affected by the number of species in a mixture, and (ii) how these relationships are affected by spatial pattern of sown plants. The main patterns of productivity response to species richness conform to other studies: non-transgressive overyielding is omnipresent (the productivity of mixtures is higher than the average of its constituent species so that the net diversity, selection and complementarity effects are positive), whereas transgressive overyielding is found only in a minority of cases (average of log(overyielding) being close to zero or negative). The theoretical prediction that plants in a random pattern should produce more than in an aggregated pattern (the distances to neighbours are smaller and consequently the competition among neighbours stronger) was confirmed in monocultures of all the eight species. The situation is more complicated in mixtures, probably as a consequence of complicated interplay between interspecific and intraspecific competition. The most productive species ( Achillea, Holcus, Plantago) were competitively superior and increased their relative productivity with mixture richness. The intraspecific competition of these species is

  17. Spatial and Temporal Patterns of Global NDVI Trends: Correlations with Climate and Human Factors

    Directory of Open Access Journals (Sweden)

    Ya Liu

    2015-10-01

    Full Text Available Changes in vegetation activity are driven by multiple natural and anthropogenic factors, which can be reflected by Normalized Difference Vegetation Index (NDVI derived from satellites. In this paper, NDVI trends from 1982 to 2012 are first estimated by the Theil–Sen median slope method to explore their spatial and temporal patterns. Then, the impact of climate variables and human activity on the observed NDVI trends is analyzed. Our results show that on average, NDVI increased by 0.46 × 10−3 per year from 1982 to 2012 globally with decadal variations. For most regions of the world, a greening (increasing–browning (decreasing–greening (G-B-G trend is observed over the periods 1982–2004, 1995–2004, and 2005–2012, respectively. A positive partial correlation of NDVI and temperature is observed in the first period but it decreases and occasionally becomes negative in the following periods, especially in the Humid Temperate and Dry Domain Regions. This suggests a weakened effect of temperature on vegetation growth. Precipitation, on the other hand, is found to have a positive impact on the NDVI trend. This effect becomes stronger in the third period of 1995–2004, especially in the Dry Domain Region. Anthropogenic effects and human activities, derived here from the Human Footprint Dataset and the associated Human Influence Index (HII, have varied impacts on the magnitude (absolute value of the NDVI trends across continents. Significant positive effects are found in Asia, Africa, and Europe, suggesting that intensive human activity could accelerate the change in NDVI and vegetation. A more accurate attribution of vegetation change to specific climatic and anthropogenic factors is instrumental to understand vegetation dynamics and requires further research.

  18. Organic aerosol spatial/temporal patterns: perspectives of measurements and model.

    Science.gov (United States)

    Pun, Betty K; Seigneur, Christian

    2008-10-01

    Ambient measurements from SEARCH and model results from CMAQ-MADRID are analyzed side by side for the southeastern United States to understand the strengths and weaknesses of an air quality model in reproducing key spatial and temporal patterns related to organic aerosol (OA), with inferences regarding secondary organic aerosol (SOA). The model predicts a larger difference in OA concentrations between an urban (JST) and a rural site (YRK) than indicated by measurements. Modeled OA concentrations at JST and YRK are more strongly correlated than measurements. On average, models may understate urban OA emissions, while overstating urban SOA production; measurements indicate that SOA production takes place on the regional scale. Modeled diurnal fluctuations for OA are stronger than measured, due partially to overestimations of the temperature dependence parameters (deltaH(vap)) for SOA in the model. Urban-rural differences in the composition of SOA, inferred from the variations of estimated deltaH(vap), are not properly captured by the model, which does not represent multiple generations of SOA or varied reaction pathways as a function of chemical regimes. Model results are hampered by day-of-the-week and diurnal allocation issues related to EC and OA emissions. Top quintile (20%) afternoon OA concentrations are observed in both warm and cold seasons at the urban site. The frequency of high OA in the cold season is overstated in the model. The model predicts the warm vs cold season frequency of elevated OA episodes better at YRK than at JST, suggesting that regional emissions, chemistry, and transport are better simulated than urban processes.

  19. Primary sensory cortices contain distinguishable spatial patterns of activity for each sense.

    Science.gov (United States)

    Liang, M; Mouraux, A; Hu, L; Iannetti, G D

    2013-01-01

    Whether primary sensory cortices are essentially multisensory or whether they respond to only one sense is an emerging debate in neuroscience. Here we use a multivariate pattern analysis of functional magnetic resonance imaging data in humans to demonstrate that simple and isolated stimuli of one sense elicit distinguishable spatial patterns of neuronal responses, not only in their corresponding primary sensory cortex, but in other primary sensory cortices. These results indicate that primary sensory cortices, traditionally regarded as unisensory, contain unique signatures of other senses and, thereby, prompt a reconsideration of how sensory information is coded in the human brain.

  20. Geo-ecological spatial pattern analysis of the island of Fogo (Cape Verde)

    Science.gov (United States)

    Olehowski, C.; Naumann, S.; Fischer, D.; Siegmund, A.

    2008-12-01

    With its small-scale climatic, floristic and geo-ecological differentiation, the island of Fogo is an optimal research area for understanding semi-arid island ecosystems in the marginal tropics. Because of the high variability in precipitation, the archipelago of Cape Verde has a potentially high ecological vulnerability, which is caused mainly by population growth, intensification of agricultural land use and increasing tourism. In this context, a geo-ecological spatial pattern analysis has been conducted for Fogo, including several types of geo-ecological layers like vegetation, elevation, aspect, soil and geology. The different kinds of spatial patterns that are detected can be used as a first tool to display distinctive levels of ecological vulnerability. These levels could constitute a base for sustainable land use planning and the redevelopment of agricultural strategies.

  1. Measuring floodplain spatial patterns using continuous surface metrics at multiple scales

    Science.gov (United States)

    Scown, Murray W.; Thoms, Martin C.; DeJager, Nathan R.

    2015-01-01

    Interactions between fluvial processes and floodplain ecosystems occur upon a floodplain surface that is often physically complex. Spatial patterns in floodplain topography have only recently been quantified over multiple scales, and discrepancies exist in how floodplain surfaces are perceived to be spatially organised. We measured spatial patterns in floodplain topography for pool 9 of the Upper Mississippi River, USA, using moving window analyses of eight surface metrics applied to a 1 × 1 m2 DEM over multiple scales. The metrics used were Range, SD, Skewness, Kurtosis, CV, SDCURV,Rugosity, and Vol:Area, and window sizes ranged from 10 to 1000 m in radius. Surface metric values were highly variable across the floodplain and revealed a high degree of spatial organisation in floodplain topography. Moran's I correlograms fit to the landscape of each metric at each window size revealed that patchiness existed at nearly all window sizes, but the strength and scale of patchiness changed within window size, suggesting that multiple scales of patchiness and patch structure exist in the topography of this floodplain. Scale thresholds in the spatial patterns were observed, particularly between the 50 and 100 m window sizes for all surface metrics and between the 500 and 750 m window sizes for most metrics. These threshold scales are ~ 15–20% and 150% of the main channel width (1–2% and 10–15% of the floodplain width), respectively. These thresholds may be related to structuring processes operating across distinct scale ranges. By coupling surface metrics, multi-scale analyses, and correlograms, quantifying floodplain topographic complexity is possible in ways that should assist in clarifying how floodplain ecosystems are structured.

  2. Spatial patterns in a base-flow index across the conterminous United States (Invited)

    Science.gov (United States)

    Wolock, D.; Carlisle, D.

    2013-12-01

    Spatial patterns in a base-flow index (BFI)--defined as the estimated percentage of base flow in streamflow--were examined across the conterminous United States. The BFI values were computed by automated hydrograph separation of historical daily streamflow records at about 8000 U.S. Geological Survey streamgages. The goals of the study were to identify the natural factors (such as climate, geology, and topography) as well as the land and water management practices (such as reservoir construction and urban development) that affect base flow. Regional statistical models indicated that spatial variability in BFI values primarily was determined by climatic factors in the western United States and by geologic and soil characteristics in the remainder of the country. Land and water management practices, for the most part, provided limited additional power in explaining spatial variability in BFI values.

  3. Dry limit to photosynthesis and cyanobacterial spatial pattern in the Atacama Desert

    Science.gov (United States)

    Warren-Rhodes, K. A.; Pointing, S. B.; Ewing, S.; Lacap, D.; Gomez-Silva, B.; Amundson, R.; Friedmann, E. I.; McKay, C. P.

    2005-12-01

    Hypolithic autotrophs inhabit translucent rocks in the world`'s most extreme hot and cold deserts. Across a rainfall gradient in the Atacama, we measured a three-fold decline in the molecular diversity of cyanobacterial communities and a drop in their abundance from 28% in relatively wet sites to 0.08% in the driest core. Like plants, hypoliths appear to exhibit traits of self-organized patchiness (aggregated spatial patterns) that tightly correlate with rainfall. Rare cyanobacteria in the core live slowly (3,200 y turnover times) and survive in spatially isolated patches of self-augmented fertility, with the dry limit to their survival occurring at ~Mars but may have existed in rare oases in the past. The spatial distributions of terrestrial desert microbes should be considered in the remote search for life on Mars.

  4. Exploratory Analysis of Spatial-Temporal Patterns of Air Pollution in the City

    Science.gov (United States)

    Champendal, Alexandre; Kanevski, Mikhail; Huguenot, Pierre-Emmanuel; Golay, Jean

    2013-04-01

    Air pollution in the city is an important problem influencing environment, well-being of society, economy, management of urban zones, etc. The problem is extremely difficult due to a very complex distribution of the pollution sources, morphology of the city and dispersion processes leading to multivariate nature of the phenomena and high local spatial-temporal variability. The task of understanding, modelling and prediction of spatial-temporal patterns of air pollution in urban zones is an interesting and challenging topic having many research axes from science-based modelling to geostatistics and data mining. The present research mainly deals with a comprehensive exploratory analysis of spatial-temporal air pollution data using statistical, geostatistical and machine learning tools. This analysis helps to 1) understand and model spatial-temporal correlations using variography, 2) explore the temporal evolution of spatial correlation matrix; 3) analyse and visualize an interconnection between measurement stations using network science tools; 4) quantify the availability and predictability of structured patterns. The real data case study deals with spatial-temporal air pollution data of canton Geneva (2002-2011). Carbon dioxide (NO2) have caught our attention. It has effects on health: nitrogen dioxide can irritate the lungs, effects on plants; NO2 contributes to the phenomenon of acid rain. The negative effects of nitrogen dioxides on plants are reducing the growth, production and pesticide resistance. And finally the effects on materials: nitrogen dioxides increase the corrosion. Well-defined patterns of spatial-temporal correlations were detected. The analysis and visualization of spatial correlation matrix for 91 stations were carried out using the network science tools and high levels of clustering were revealed. Moving Window Correlation Matrix and Spatio-temporal variography methods were applied to define and explore the dynamic of our data. More than just

  5. Spatial patterns of neuronal activity in rat cerebral cortex during non-rapid eye movement sleep

    OpenAIRE

    Wanger, Tim; Wetzel, Wolfram; Scheich, Henning; Ohl, Frank W.; Goldschmidt, Jürgen

    2014-01-01

    It is commonly assumed that cortical activity in non-rapid eye movement sleep (NREMS) is spatially homogeneous on the mesoscopic scale. This is partly due to the limited observational scope of common metabolic or imaging methods in sleep. We used the recently developed technique of thallium-autometallography (TlAMG) to visualize mesoscopic patterns of activity in the sleeping cortex with single-cell resolution. We intravenously injected rats with the lipophilic chelate complex thallium diethy...

  6. Exploring spatial patterns of urban brownfields regeneration: The case of Brno, Czech Republic

    Czech Academy of Sciences Publication Activity Database

    Frantál, Bohumil; Greer-Wootten, B.; Klusáček, Petr; Krejčí, Tomáš; Kunc, Josef; Martinát, Stanislav

    2015-01-01

    Roč. 44, č. 1 (2015), s. 9-18 ISSN 0264-2751 R&D Projects: GA TA ČR(CZ) TD020259 Institutional support: RVO:68145535 Keywords : brownfields * urban renewal * spatial patterns Subject RIV: DE - Earth Magnetism, Geodesy, Geography Impact factor: 2.051, year: 2015 http://dx.doi.org/10.1016/j.cities.2014.12.007

  7. Spatial patterns with memory: tree regeneration after stand-replacing disturbance in Picea abies mountain forests

    Czech Academy of Sciences Publication Activity Database

    Wild, Jan; Kopecký, Martin; Svoboda, M.; Zenáhlíková, J.; Edwards-Jonášová, Magda; Herben, Tomáš

    2014-01-01

    Roč. 25, č. 6 (2014), s. 1327-1340 ISSN 1100-9233 R&D Projects: GA ČR GAP504/10/0843; GA MŽP SP/2D2/111/08 Institutional support: RVO:67985939 ; RVO:67179843 Keywords : bark beetle * spatial pattern * mountain spruce forest Subject RIV: EF - Botanics; EH - Ecology, Behaviour (UEK-B) Impact factor: 3.709, year: 2014

  8. Abnormal Spatial-Temporal Pattern Analysis for Niagara Frontier Border Wait Times

    OpenAIRE

    Zhang, Zhenhua; Lin, Lei

    2017-01-01

    Border crossing delays cause problems like huge economics loss and heavy environmental pollutions. To understand more about the nature of border crossing delay, this study applies a dictionary-based compression algorithm to process the historical Niagara Frontier border wait times data. It can identify the abnormal spatial-temporal patterns for both passenger vehicles and trucks at three bridges connecting US and Canada. Furthermore, it provides a quantitate anomaly score to rank the wait tim...

  9. Spatial pattern of reference evapotranspiration change and its temporal evolution over Southwest China

    Science.gov (United States)

    Sun, Shanlei; Wang, Guojie; Huang, Jin; Mu, Mengyuan; Yan, Guixia; Liu, Chunwei; Gao, Chujie; Li, Xing; Yin, Yixing; Zhang, Fangmin; Zhu, Siguang; Hua, Wenjian

    2017-11-01

    Due to the close relationship of climate change with reference evapotranspiration (ETo), detecting changes in ETo spatial distribution and its temporal evolution at local and regional levels is favorable to comprehensively understand climate change-induced impacts on hydrology and agriculture. In this study, the objective is to identify whether climate change has caused variation of ETo spatial distribution in different analysis periods [i.e., long- (20-year), medium- (10-year), and short-term (5-year)] and to investigate its temporal evolution (namely, when these changes happened) at annual and monthly scales in Southwest China (SWC). First, we estimated ETo values using the United Nations Food and Agriculture Organization (FAO) Penman-Monteith equation, based on historical climate data measured at 269 weather sites during 1973-2012. The analysis of variance (ANOVA) results indicated that the spatial pattern of annual ETo had significantly changed during the past 40 years, particularly in west SWC for the long-term analysis period, and west and southeast SWC in both medium- and short-term periods, which corresponded to the percent area of significant differences which were 21.9, 58.0, and 48.2 %, respectively. For investigating temporal evolution of spatial patterns of annual ETo, Duncan's multiple range test was used, and we found that the most significant changes appeared during 1988-2002 with the significant area of higher than 25.0 %. In addition, for long-, medium-, and short-term analysis periods, the spatial distribution has significantly changed during March, September, November, and December, especially in the corresponding periods of 1988-1997, 1983-1992, 1973-1977, and 1988-2002. All in all, climate change has resulted in significant ETo changes in SWC since the 1970s. Knowledge of climate change-induced spatial distribution of ETo and its temporal evolution would aid in formulating strategies for water resources and agricultural managements.

  10. Spatial diversity patterns of birds in a vegetation mosaic of the Pantanal, Mato Grosso, Brazil

    Directory of Open Access Journals (Sweden)

    Cleiton Adriano Signor

    2011-12-01

    Full Text Available In this contribution we characterize the spatial diversity of bird populations in a heterogeneous landscape with respect to vegetation in the northern Pantanal region of Brazil. The method of additive partitioning of species diversity (γ = α + β was used. Samples were collected in a grid with 30 sampling plots within a 25 km² area (5 x 5 km. A total of 163 bird species were found, comprising 114 resident species and 49 regional migrants. Most species were restricted spatially, with 58% found in a maximum of five sampling plots, while 15% were found in only one plot. The beta diversity comprised 77% of total diversity and was lower for residents than for regional migrants (66% and 88%, respectively. This suggests greater spatial heterogeneity in diversity patterns for regional migrants. Seasonal availability of resources caused by changing water levels as well as anthropogenic influences may also play a role in species diversity patterns by influencing species composition across sampling plots. High beta diversity and species-specific habitat occupancy suggest that conservation and management strategies should be implemented at a regional spatial scale and focus on the conservation of this environmental mosaic.

  11. Field spatial and temporal patterns of soil water content and bulk density changes

    Directory of Open Access Journals (Sweden)

    Timm Luís Carlos

    2006-01-01

    Full Text Available Soil water content (theta and bulk density (rhos greatly influence important soil and plant processes, such as water movement, soil compaction, soil aeration, and plant root system development. Spatial and temporal variability of theta and rhos during different periods of the year and different phases of crops are of fundamental interest. This work involves the characterization of spatial and temporal patterns of theta and rhos during different climatic periods of year, aiming to verify whether there are significant temporal changes in rhos at the soil surface layer when submitted to wetting and drying cycles. The field experiment was carried out in a coffee plantation, Rhodic Kandiudalf soil, clayey texture. Using a neutron/gamma surface probe, theta and rhos were measured meter by meter along a 200 m spatial transect, along an interrow contour line. During the wet period there was no difference of spatial patterns of theta while during the dry period differences were observed, and can be associated to precipitation events. It was also observed that there are rhos temporal changes at the soil surface along the studied period as a consequence of the in situ wetting and drying cycles.

  12. Utilizing Geographic Information Systems (GIS) to analyze geographic and demographic patterns related to forensic case recovery locations in Florida.

    Science.gov (United States)

    Kolpan, Katharine E; Warren, Michael

    2017-12-01

    This paper highlights how Geographic Information Systems (GIS) can be utilized to analyze biases and patterns related to physical and cultural geography in Florida. Using case recovery locations from the C. Addison Pound Human Identification Laboratory (CAPHIL), results indicate that the majority of CAPHIL cases are recovered from urban areas with medium to low population density and low rates of crime. The results also suggest that more accurate record keeping methods would enhance the data. Copyright © 2017 Elsevier B.V. All rights reserved.

  13. [Spatial distribution pattern and allometric growth of three common species on moving sand dunes in Horqin Sandy Land, China].

    Science.gov (United States)

    Jia, Mei-yu; Li, Xue-hua; Oh, Choong-hyeon; Park, Hong-chul; Miao, Chun-ping; Han, Xu

    2015-10-01

    Research on fine scale pattern and characteristics of allometric growth could contribute to better understanding plants' adaptation in moving sandy dunes. The abundance, height and biomass of 3 species Agriophilum aquarrosum, Corispermum candelabrum and Setaria viridis in twenty-eight 1 m x 1 m quadrats of Horqin Sandy Land were identified, mapped and described. The nearest neighbor method and O-ring O(r) function analysis were applied to analyze the spatial patterns. The results showed that the individual spatial pattern was mainly aggregated in 1 m x 1 m quadrat at community level but mainly random at population level. At 0-50 cm individual distance scale, both intraspecific and interspecific relationship were facilitation and aggregated distribution occurred at some scales and varied with increasing plant abundance in 1 m x 1 m quadrat. In 0-40 cm, the aggregated distribution of S. viridis and A. aquarrosum increased obviously; in 10-20 cm, both intraspecific and interspecific aggregation increased; in 10-30 cm, the occurrence possibility of positive correlations between S. viridis and A. aquarrosum, S. viridis and C. candelabrum all increased; in 40-50 cm, the possibility of positive correlations between A. squarrosum and S. viridis, A. squarrosum and C. candelabrum all increased. Research on the three species components indicated that the growth rate of above-ground was faster than that of underground. S. viridis had the highest ratio of under-ground biomass to above-ground biomass but its nutritional organs' biomass ratio was medium. C. candelabrum allocated more biomass to propagative organs and stem, but A. squarrosum allocated more biomass to nutritional organs. Based on the spatial distribution and allometric characteristics, the three common species in moving sand dunes preferred r strategy in their life history.

  14. Spatial Pattern Determination of Biodiversity Threats at Landscape Level (Case Study: Golestan Province

    Directory of Open Access Journals (Sweden)

    R. Mirzaei

    2015-06-01

    Full Text Available Mapping spatial patterns of potential biodiversity threats is one of the important steps for effective conservation planning and activities. To determine the spatial patterns of threats in Golestan province, 12 criteria in four main groups including structural (fractal coefficient of perimeter, circularity ratio of area, average slope, compositional aspects of biodiversity (presence of species at risk, non-biological threats (distance to city, distance to village, distance to road, distance to infrastructure, distance to agricultural land, soil pollution, risk of fire and isolation (Nearest Neighbor Index were used. These data layers were digitized in GIS environment and were weighted through Analytical Hierarchy Process. A weighted linear combination was then used to map the spatial pattern of biodiversity threats in the province. Compositional aspect (0.59, non-biological threats (0.23, isolation (0.11, and structural aspect (0.07 were relatively weighted in the order of importance. Central parts of the province and patches in the northern and southern parts were recognized to be more exposed to biodiversity threats. The central parts of the province were mostly threatened by urban, industrial, road and agricultural development, whereas the northern and southern parts were recognized as areas of conservation importance having a variety of threatened birds.

  15. Analysis of spatial relationships in three dimensions: tools for the study of nerve cell patterning

    Directory of Open Access Journals (Sweden)

    Raven Mary A

    2008-07-01

    Full Text Available Abstract Background Multiple technologies have been brought to bear on understanding the three-dimensional morphology of individual neurons and glia within the brain, but little progress has been made on understanding the rules controlling cellular patterning. We describe new matlab-based software tools, now available to the scientific community, permitting the calculation of spatial statistics associated with 3D point patterns. The analyses are largely derived from the Delaunay tessellation of the field, including the nearest neighbor and Voronoi domain analyses, and from the spatial autocorrelogram. Results Our tools enable the analysis of the spatial relationship between neurons within the central nervous system in 3D, and permit the modeling of these fields based on lattice-like simulations, and on simulations of minimal-distance spacing rules. Here we demonstrate the utility of our analysis methods to discriminate between two different simulated neuronal populations. Conclusion Together, these tools can be used to reveal the presence of nerve cell patterning and to model its foundation, in turn informing on the potential developmental mechanisms that govern its establishment. Furthermore, in conjunction with analyses of dendritic morphology, they can be used to determine the degree of dendritic coverage within a volume of tissue exhibited by mature nerve cells.

  16. Spatial patterns of neuronal activity in rat cerebral cortex during non-rapid eye movement sleep.

    Science.gov (United States)

    Wanger, Tim; Wetzel, Wolfram; Scheich, Henning; Ohl, Frank W; Goldschmidt, Jürgen

    2015-11-01

    It is commonly assumed that cortical activity in non-rapid eye movement sleep (NREMS) is spatially homogeneous on the mesoscopic scale. This is partly due to the limited observational scope of common metabolic or imaging methods in sleep. We used the recently developed technique of thallium-autometallography (TlAMG) to visualize mesoscopic patterns of activity in the sleeping cortex with single-cell resolution. We intravenously injected rats with the lipophilic chelate complex thallium diethyldithiocarbamate (TlDDC) during spontaneously occurring periods of NREMS and mapped the patterns of neuronal uptake of the potassium (K+) probe thallium (Tl+). Using this method, we show that cortical activity patterns are not spatially homogeneous during discrete 5-min episodes of NREMS in unrestrained rats-rather, they are complex and spatially diverse. Along with a relative predominance of infragranular layer activation, we find pronounced differences in metabolic activity of neighboring neuronal assemblies, an observation which lends support to the emerging paradigm that sleep is a distributed process with regulation on the local scale.

  17. Spatial pattern characteristics of water footprint for maize production in Northeast China.

    Science.gov (United States)

    Duan, Peili; Qin, Lijie; Wang, Yeqiao; He, Hongshi

    2016-01-30

    Water footprint (WF) methodology is essential for quantifying total water consumption of crop production and making efficient water management policies. This study calculated the green, blue, grey and total WFs of maize production in Northeast China from 1998 to 2012 and compared the values of the provinces. This study also analyzed the spatial variation and structure characteristics of the WFs at the prefecture level. The annual average WF of maize production was 1029 m(3) per ton, which was 51% green, 21% blue and 28% grey. The WF of maize production was highest in Liaoning Province, moderate in Heilongjiang Province and lowest in Jilin Province. The spatial differences of the WFs calculated for the 36 major maize production prefectures were significant in Northeast China. There was a moderate positive spatial autocorrelation among prefectures that had similar WFs. Local indicator of spatial autocorrelation index (LISA) analysis identified prefectures with higher WFs in the southeast region of Liaoning Province and the southwest region of Heilongjiang Province and prefectures with lower WFs in the middle of Jilin Province. Spatial differences in the WF of maize production were caused mainly by variations in climate conditions, soil quality, irrigation facilities and maize yield. The spatial distribution of WFs can help provide a scientific basis for optimizing maize production distribution and then formulate strategies to reduce the WF of maize production. © 2015 Society of Chemical Industry.

  18. Spatial Distribution Patterns in the Very Rare and Species-Rich Picea chihuahuana Tree Community (Mexico)

    Science.gov (United States)

    Wehenkel, Christian; Brazão-Protázio, João Marcelo; Carrillo-Parra, Artemio; Martínez-Guerrero, José Hugo; Crecente-Campo, Felipe

    2015-01-01

    The very rare Mexican Picea chihuahuana tree community covers an area of no more than 300 ha in the Sierra Madre Occidental. This special tree community has been the subject of several studies aimed at learning more about the genetic structure and ecology of the species and the potential effects of climate change. The spatial distribution of trees is a result of many ecological processes and can affect the degree of competition between neighbouring trees, tree density, variability in size and distribution, regeneration, survival, growth, mortality, crown formation and the biological diversity within forest communities. Numerous scale-dependent measures have been established in order to describe spatial forest structure. The overall aim of most of these studies has been to obtain data to help design preservation and conservation strategies. In this study, we examined the spatial distribution pattern of trees in the P. chihuahuana tree community in 12 localities, in relation to i) tree stand density, ii) diameter distribution (vertical structure), iii) tree species diversity, iv) geographical latitude and v) tree dominance at a fine scale (in 0.25 ha plots), with the aim of obtaining a better understanding of the complex ecosystem processes and biological diversity. Because of the strongly mixed nature of this tree community, which often produces low population densities of each tree species and random tree fall gaps caused by tree death, we expect aggregated patterns in individual Picea chihuahuana trees and in the P. chihuahuana tree community, repulsive Picea patterns to other tree species and repulsive patterns of young to adult trees. Each location was represented by one plot of 50 x 50 m (0.25 ha) established in the centre of the tree community. The findings demonstrate that the hypothesis of aggregated tree pattern is not applicable to the mean pattern measured by Clark-Evans index, Uniform Angle index and Mean Directional index of the uneven-aged P

  19. Linking the spatial patterns of organisms and abiotic factors to ecosystem function and management: insights from semi-arid environments

    Directory of Open Access Journals (Sweden)

    F. T. Maestre

    2006-12-01

    Full Text Available Numerous theoretical and modeling studies have demonstrated the ecological significance of the spatial patterning of organisms on ecosystem functioning and dynamics. However, there is a paucity of empirical evidence that quantitatively shows how changes in the spatial patterns of the organisms forming biotic communities are directly related to ecosystem structure and functioning. In this article, I review a series of experiments and observational studies conducted in semi-arid environments from Spain (degraded calcareous shrubland, steppes dominated by Stipa tenacissima, and gypsum shrublands to: 1 evaluate whether the spatial patterns of the dominant biotic elements in the community are linked to ecosystem structure and functioning, and 2 test if these patterns, and those of abiotic factors, can be used to improve ecosystem restoration. In the semiarid steppes we found a significant positive relationship between the spatial pattern of the perennial plant community and: i the water status of S. tenacissima and ii perennial species richness and diversity. Experimental plantings conducted in these steppes showed that S. tenacissima facilitated the establishment of shrub seedlings, albeit the magnitude and direction of this effect was dependent on rainfall conditions during the first yr after planting. In the gypsum shrubland, a significant, direct relationship between the spatial pattern of the biological soil crusts and surrogates of ecosystem functioning (soil bulk density and respiration was found. In a degraded shrubland with very low vegetation cover, the survival of an introduced population of the shrub Pistacia lentiscus showed marked spatial patterns, which were related to the spatial patterns of soil properties such as soil compaction and sand content. These results provide empirical evidence on the importance of spatial patterns for maintaining ecosystem structure and functioning in semi-arid ecosystems

  20. Patterns of preserved and impaired spatial memory in a case of developmental amnesia

    Directory of Open Access Journals (Sweden)

    R Shayna eRosenbaum

    2015-05-01

    Full Text Available The hippocampus is believed to have evolved to support allocentric spatial representations of environments as well as the details of personal episodes that occur within them, whereas other brain structures are believed to support complementary egocentric spatial representations. Studies of patients with adult-onset lesions lend support to these distinctions for newly encountered places but suggest that with time and/or experience, schematic aspects of environments can exist independent of the hippocampus. Less clear is the quality of spatial memories acquired in individuals with impaired episodic memory in the context of a hippocampal system that did not develop normally. Here we describe a detailed investigation of the integrity of spatial representations of environments navigated repeatedly over many years in the rare case of H.C., a person with congenital absence of the mammillary bodies and abnormal hippocampal and fornix development. H.C. and controls who had extensive experience navigating the residential and downtown areas known to H.C. were tested on mental navigation tasks that assess the identity, location, and spatial relations among landmarks, and the ability to represent routes. H.C. was able to represent distances and directions between familiar landmarks and provide accurate, though inefficient, route descriptions. However, difficulties producing detailed spatial features on maps and accurately ordering more than two landmarks that are in close proximity to one another along a route suggest a spatial representation that includes only coarse, schematic information that lacks coherence and that cannot be used flexibly. This pattern of performance is considered in the context of other areas of preservation and impairment exhibited by H.C. and suggests that the allocentric-egocentric dichotomy with respect to hippocampal and extended hippocampal system function may need to be reconsidered.

  1. Spatial patterns and broad-scale weather cues of beech mast seeding in Europe.

    Science.gov (United States)

    Vacchiano, Giorgio; Hacket-Pain, Andrew; Turco, Marco; Motta, Renzo; Maringer, Janet; Conedera, Marco; Drobyshev, Igor; Ascoli, Davide

    2017-07-01

    Mast seeding is a crucial population process in many tree species, but its spatio-temporal patterns and drivers at the continental scale remain unknown . Using a large dataset (8000 masting observations across Europe for years 1950-2014) we analysed the spatial pattern of masting across the entire geographical range of European beech, how it is influenced by precipitation, temperature and drought, and the temporal and spatial stability of masting-weather correlations. Beech masting exhibited a general distance-dependent synchronicity and a pattern structured in three broad geographical groups consistent with continental climate regimes. Spearman's correlations and logistic regression revealed a general pattern of beech masting correlating negatively with temperature in the summer 2 yr before masting, and positively with summer temperature 1 yr before masting (i.e. 2T model). The temperature difference between the two previous summers (DeltaT model) was also a good predictor. Moving correlation analysis applied to the longest eight chronologies (74-114 yr) revealed stable correlations between temperature and masting, confirming consistency in weather cues across space and time. These results confirm widespread dependency of masting on temperature and lend robustness to the attempts to reconstruct and predict mast years using temperature data. © 2017 The Authors. New Phytologist © 2017 New Phytologist Trust.

  2. Spatial profiling of nuclear receptor transcription patterns over the course of Drosophila development.

    Science.gov (United States)

    Wilk, Ronit; Hu, Jack; Krause, Henry M

    2013-07-08

    Previous work has shown that many of the 18 family members of Drosophila nuclear receptor transcription factors function in a temporal hierarchy to coordinate developmental progression and growth with the rate limiting process of metabolism. To gain further insight into these interactions and processes, we have undertaken a whole-family analysis of nuclear receptor mRNA spatial expression patterns over the entire process of embryogenesis, as well as the 3rd instar wandering larva stage, by using high-resolution fluorescence in situ hybridization. Overall, the patterns of expression are remarkably consistent with previously mapped spatial activity profiles documented during the same time points, with similar hot spots and temporal profiles in endocrine and metabolically important tissues. Among the more remarkable of the findings is that the majority of mRNA expression patterns observed show striking subcellular distributions, indicating potentially critical roles in the control of protein synthesis and subsequent subcellular distributions. These patterns will serve as a useful reference for future studies on the tissue-specific roles and interactions of nuclear receptor proteins, partners, cofactors and ligands.

  3. Comparative analysis on some spatial-domain filters for fringe pattern denoising.

    Science.gov (United States)

    Wang, Haixia; Kemao, Qian

    2011-04-20

    Fringe patterns produced by various optical interferometric techniques encode information such as shape, deformation, and refractive index. Noise affects further processing of the fringe patterns. Denoising is often needed before fringe pattern demodulation. Filtering along the fringe orientation is an effective option. Such filters include coherence enhancing diffusion, spin filtering with curve windows, second-order oriented partial-differential equations, and the regularized quadratic cost function for oriented fringe pattern filtering. These filters are analyzed to establish the relationships among them. Theoretical analysis shows that the four filters are largely equivalent to each other. Quantitative results are given on simulated fringe patterns to validate the theoretical analysis and to compare the performance of these filters. © 2011 Optical Society of America

  4. Analyzing a problem-solution pattern in the transcription of a conversation: suggestions for the ELF classroom

    Directory of Open Access Journals (Sweden)

    Navas Brenes, César A.

    2005-12-01

    Full Text Available This paper analyzes a problem-solution pattern shown in the transcription of a conversation. This analysis is based on a conversation that has been elicited from three native speakers of English. These speakers were given a topic that dealt with the problem of children being constantly exposed to violent video games. As a result, the writer recorded an oral text that contains several elements related to a problem-solution pattern such as the main issue, opinions, personal examples, possible solutions, and the evaluation of these solutions. The writer analyzed this pattern in terms of discourse analysis using idea units from the transcription. Moreover, the writer will point out how appropriate this transcription is for preparing teaching tasks for the EFL classroom. Este artículo analiza el patrón estructural de la solución de un problema evidente en la transcripción de una conversación. El análisis esta basado en un diálogo obtenido de tres hablantes nativos de la lengua inglesa. El autor suministró a dichas personas un tema relacionado con el problema de la exposición de niños al contenido violento de los juegos de video. Como resultado, el escritor obtuvo una grabación del texto oral que contiene varios elementos relacionados con el patrón estructural de la solución de un problema. Algunos de estos elementos son el problema principal, opiniones, ejemplos personales, soluciones viables al problema, y la evaluación de dichas soluciones. El autor analizó algunas líneas de la transcripción con la ayuda de algunos conceptos relacionados con el análisis del discurso. Cabe destacar que el uso de tales trascripciones es muy apropiado en la preparación de actividades para una clase de inglés como lengua extranjera.

  5. Ectomycorrhizal-dominated boreal and tropical forests have distinct fungal communities, but analogous spatial patterns across soil horizons.

    Directory of Open Access Journals (Sweden)

    Krista L McGuire

    Full Text Available Fungi regulate key nutrient cycling processes in many forest ecosystems, but their diversity and distribution within and across ecosystems are poorly understood. Here, we examine the spatial distribution of fungi across a boreal and tropical ecosystem, focusing on ectomycorrhizal fungi. We analyzed fungal community composition across litter (organic horizons and underlying soil horizons (0-20 cm using 454 pyrosequencing and clone library sequencing. In both forests, we found significant clustering of fungal communities by site and soil horizons with analogous patterns detected by both sequencing technologies. Free-living saprotrophic fungi dominated the recently-shed leaf litter and ectomycorrhizal fungi dominated the underlying soil horizons. This vertical pattern of fungal segregation has also been found in temperate and European boreal forests, suggesting that these results apply broadly to ectomycorrhizal-dominated systems, including tropical rain forests. Since ectomycorrhizal and free-living saprotrophic fungi have different influences on soil carbon and nitrogen dynamics, information on the spatial distribution of these functional groups will improve our understanding of forest nutrient cycling.

  6. Using Multi-Temporal Remote Sensing Data to Analyze the Spatio-Temporal Patterns of Dry Season Rice Production in Bangladesh

    Science.gov (United States)

    Shew, A. M.; Ghosh, A.

    2017-10-01

    Remote sensing in the optical domain is widely used in agricultural monitoring; however, such initiatives pose a challenge for developing countries due to a lack of high quality in situ information. Our proposed methodology could help developing countries bridge this gap by demonstrating the potential to quantify patterns of dry season rice production in Bangladesh. To analyze approximately 90,000 km2 of cultivated land in Bangladesh at 30 m spatial resolution, we used two decades of remote sensing data from the Landsat archive and Google Earth Engine (GEE), a cloud-based geospatial data analysis platform built on Google infrastructure and capable of processing petabyte-scale remote sensing data. We reconstructed the seasonal patterns of vegetation indices (VIs) for each pixel using a harmonic time series (HTS) model, which minimizes the effects of missing observations and noise. Next, we combined the seasonality information of VIs with our knowledge of rice cultivation systems in Bangladesh to delineate rice areas in the dry season, which are predominantly hybrid and High Yielding Varieties (HYV). Based on historical Landsat imagery, the harmonic time series of vegetation indices (HTS-VIs) model estimated 4.605 million ha, 3.519 million ha, and 4.021 million ha of rice production for Bangladesh in 2005, 2010, and 2015 respectively. Fine spatial scale information on HYV rice over the last 20 years will greatly improve our understanding of double-cropped rice systems, current status of production, and potential for HYV rice adoption in Bangladesh during the dry season.

  7. Spatial and Time Pattern Distribution of Water Birds Community at Mangrove Ecosystem of Bengawan Solo Estuary - Gresik Regency

    Directory of Open Access Journals (Sweden)

    Sutopo .

    2018-01-01

    Full Text Available Mangrove ecosystem in Bengawan Solo estuary is a part of the essential ecosystem and also as important and endemic birds’ areas. Aim of this study is to analysis the parameter of habitat condition, analysis the different of time and spatial pattern and provide the management strategy for water birds and habitat. Reseach was carry out at January – May, 2017 (two period observation. Methods are used i.e. concentration count, single and unit plot, point count, interview and field observation. Data analyze using chi-square, grid-line point and mark point, beak-type and vegetation analysis. There are 41 (forty one species of water birds (23 migrant species and 17 native species. Chi-square analysis have significance difference both the time and spatial and also type of feed with chi-square values (χ2 hit.(2;0,95 > χ2 tab.(2;0,95. Migrant birds’ occupy the mudflat for feeding and resting ground, while the native birds use pond areas. Common the invertebrate species as feed for migrant like crustace and native birds are tend to feed fish and shrimp. Feeding and resting activities by migrant birds was influence by water-tidal condition. Total of water birds population are 112.100+ individual. Total of mangrove species was identified are 15 (fifteen species, and dominant at three habitus by Avicennia alba.Keywords: Bengawan Solo Estuary, mangrove ecosystem, spatial and time, water birds

  8. Dataset on outdoor behavior-system and spatial-pattern in the third place in cold area-based on the perspective of new energy structure

    Directory of Open Access Journals (Sweden)

    Kai Ren

    2017-02-01

    Full Text Available The data presented in this paper are related to the research article entitled “Exploration of Outdoor Behavior System and Spatial Pattern in the Third Place in Cold Area- based on the perspective of new energy structure” (Ren, 2016 [1]. The dataset was from a field sub-time extended investigation to residents of Power Home Community in Inner Mongolia of China that belongs to cold region of ID area according to Chinese design code for buildings. This filed data provided descriptive statistics about environment-behavior symbiosis system, environment loading, behavior system, spatial demanding and spatial pattern for all kinds of residents (Older, younger, children. The field data set is made publicly available to enable critical or extended analyzes.

  9. Recent growth of conifer species of western North America: Assessing spatial patterns of radial growth trends

    Science.gov (United States)

    McKenzie, D.; Hessl, Amy E.; Peterson, D.L.

    2001-01-01

    We explored spatial patterns of low-frequency variability in radial tree growth among western North American conifer species and identified predictors of the variability in these patterns. Using 185 sites from the International Tree-Ring Data Bank, each of which contained 10a??60 raw ring-width series, we rebuilt two chronologies for each site, using two conservative methods designed to retain any low-frequency variability associated with recent environmental change. We used factor analysis to identify regional low-frequency patterns in site chronologies and estimated the slope of the growth trend since 1850 at each site from a combination of linear regression and time-series techniques. This slope was the response variable in a regression-tree model to predict the effects of environmental gradients and species-level differences on growth trends. Growth patterns at 27 sites from the American Southwest were consistent with quasi-periodic patterns of drought. Either 12 or 32 of the 185 sites demonstrated patterns of increasing growth between 1850 and 1980 A.D., depending on the standardization technique used. Pronounced growth increases were associated with high-elevation sites (above 3000 m) and high-latitude sites in maritime climates. Future research focused on these high-elevation and high-latitude sites should address the precise mechanisms responsible for increased 20th century growth.

  10. Geophysical characterization of soil moisture spatial patterns in a tillage experiment

    Science.gov (United States)

    Martinez, G.; Vanderlinden, K.; Giráldez, J. V.; Muriel, J. L.

    2009-04-01

    Knowledge on the spatial soil moisture pattern can improve the characterisation of the hydrological response of either field-plots or small watersheds. Near-surface geophysical methods, such as electromagnetic induction (EMI), provide a means to map such patterns using non-invasive and non-destructive measurements of the soil apparent electrical conductivity (ECa. In this study ECa was measured using an EMI sensor and used to characterize spatially the hydrologic response of a cropped field to an intense shower. The study site is part of a long-term tillage experiment in Southern Spain in which Conventional Tillage (CT), Direct Drilling (DD) and Minimum Tillage (MT) are being evaluated since 1982. Soil ECa was measured before and after a rain event of 115 mm, near the soil surface and at deeper depth (ECas and ECad, respectively) using the EM38-DD EMI sensor. Simultaneously, elevation data were collected at each sampling point to generate a Digital Elevation Model (DEM). Soil moisture during the first survey was close to permanent wilting point and near field capacity during the second survey. For the first survey, both ECas and ECad, were higher in the CT and MT than in the DD plots. After the rain event, rill erosion appeared only in CT and MT plots were soil was uncovered, matching the drainage lines obtained from the DEM. Apparent electrical conductivity increased all over the field plot with higher increments in the DD plots. These plots showed the highest ECas and ECad values, in contrast to the spatial pattern found during the first sampling. Difference maps obtained from the two ECas and ECad samplings showed a clear difference between DD plots and CT and MT plots due to their distinct hydrologic response. Water infiltration was higher in the soil of the DD plots than in the MT and CT plots, as reflected by their ECad increment. Higher ECa increments were observed in the depressions of the terrain, where water and sediments accumulated. On the contrary, the

  11. [Spatial pattern of soil fertility in Bashan tea garden: a prediction based on environmental auxiliary variables].

    Science.gov (United States)

    Qin, Le-feng; Yang, Chao; Lin, Fen-fang; Yang, Ning; Zheng, Xin-yu; Xu, Hong-wei; Wang, Ke

    2010-12-01

    Taking topographic factors and NDVI as auxiliary variables, and by using regression-kriging method, the spatial variation pattern of soil fertility in Bashan tea garden in the hilly area of Fuyang City was explored. The spatial variability of the soil fertility was mainly attributed to the structural factors such as relative elevation and flat/vertical curvature. The lower the relative elevation, the worse the soil fertility was. The overall soil fertility level was relatively high, and the area with lower soil fertility only accounted for 5% of the total. By using regression-kriging method with relative elevation as auxiliary variable, the prediction accuracy of soil fertility was obviously higher than that by using ordinary kriging method, with the mean error and root mean square error being 0. 028 and 0. 108, respectively. It was suggested that the prediction method used in this paper could fully reflect the effects of environmental variables on soil fertility , improve the prediction accuracy about the spatial pattern of soil fertility, and provide scientific basis for the precise management of tea garden.

  12. A spatial point pattern analysis in Drosophila blastoderm embryos evaluating the potential inheritance of transcriptional states.

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    Feng He

    Full Text Available The Drosophila blastoderm embryo undergoes rapid cycles of nuclear division. This poses a challenge to genes that need to reliably sense the concentrations of morphogen molecules to form desired expression patterns. Here we investigate whether the transcriptional state of hunchback (hb, a target gene directly activated by the morphogenetic protein Bicoid (Bcd, exhibits properties indicative of inheritance between mitotic cycles. To achieve this, we build a dataset of hb transcriptional states at the resolution of individual nuclei in embryos at early cycle 14. We perform a spatial point pattern (SPP analysis to evaluate the spatial relationships among the nuclei that have distinct numbers of hb gene copies undergoing active transcription in snapshots of embryos. Our statistical tests and simulation studies reveal properties of dispersed clustering for nuclei with both or neither copies of hb undergoing active transcription. Modeling of nuclear lineages from cycle 11 to cycle 14 suggests that these two types of nuclei can achieve spatial clustering when, and only when, the transcriptional states are allowed to propagate between mitotic cycles. Our results are consistent with the possibility where the positional information encoded by the Bcd morphogen gradient may not need to be decoded de novo at all mitotic cycles in the Drosophila blastoderm embryo.

  13. [Spatial scale effect of urban land use landscape pattern in Shanghai City].

    Science.gov (United States)

    Xu, Li-Hua; Yue, Wen Ze; Cao, Yu

    2007-12-01

    Based on geographic information system (GIS) and remote sensing (RS) techniques, the landscape classes of urban land use in Shanghai City were extracted from SPOT images with 5 m spatial resolution in 2002, and then, the classified data were applied to quantitatively explore the change patterns of several basic landscape metrics at different scales. The results indicated that landscape metrics were sensitive to grain- and extent variance. Urban landscape pattern was spatially dependent. In other words, different landscape metrics showed different responses to scale. The resolution of 40 m was an intrinsic observing scale for urban landscape in Shanghai City since landscape metrics showed random characteristics while the grain was less than 40 m. The extent of 24 km was a symbol scale in a series of extents, which was consistent with the boundary between urban built-up area and suburban area in Shanghai City. As a result, the extent of 12 km away from urban center would be an intrinsic handle scale for urban landscape in Shanghai City. However, due to the complexity of urban structure and asymmetry of urban spatial expansion, the intrinsic handle scale was not regular extent, and the square with size of 24 km was just an approximate intrinsic extent for Shanghai City.

  14. Very high resolution airborne imagery for characterising spatial and temporal thermal patterns of braided rivers

    Science.gov (United States)

    Wawrzyniak, V.; Piégay, H.; Allemand, P.; Grandjean, P.

    2011-12-01

    At the catchment scale water temperature is influenced by geographical factors, but at the reach scale superficial and groundwater hydrology and channel geometry strongly affect thermal patterns. During the last 30 years, studies have been pointed out the significance and complexity of water exchanges between the channel and the hyporheic and phreatic zones. These surface-subsurface water exchanges influence water temperature patterns. Braided rivers present particular thermal conditions with very high spatial water temperature variability. This high thermal variability is difficult to comprehend using only in situ measurements and so thermal infrared (TIR) remote sensing is particularly suited to assessing the thermal patterns associated with these rivers. The aims of this study are to evaluate temperature patterns of nine braided reaches at very high spatial resolution (~20 cm) and to link temperature and water-body types. We hypothesized that river type has an influence of the spatial patterns of water temperature and that the patterns change through the day. All reaches are located in France, in the Rhône catchment. The nine reaches were selected based on high aquatic habitat diversities and are located in three regional areas: the massif des Écrins, the Rhône valley, and south Alps. They are about 1 km long. We have three distinct temporal approaches. The first one is a multi-site approach which proposes one survey of each site during summers 2010 or 2011. Three reaches were selected for the second phase (a multi-annual analysis and were therefore imaged both in summers 2010 and 2011. The last phase is an intra-day survey of two reaches with several flights at different times of day. This presentation focuses on the last approach with two reaches of the Drôme and Drac Noir rivers. To observe the evolution of the thermal patterns of these two reaches through the day, four flights within a day were realized during summer 2011 for both sites. The Drôme reach

  15. Experimental Investigation of Scalar Patterns in a Spatially Periodic Flow Field

    Science.gov (United States)

    Rajaei, Hadi; Baskan, Ozge; Speetjens, Michel; Clercx, Herman

    2013-11-01

    Spatially persisting patterns that form during the downstream evolution of passive scalars in three-dimensional (3D) spatially periodic flow fields is a fundamental aspect of industrial mixing processes that rely on the static mixing principle. Despite many numerical studies on 3D spatially periodic flow fields, a comprehensive experimental research on the periodic flow field is still scarce. This research focuses on a comparative analysis between laboratory experiments and numerical simulations on the evolution of the periodic flow field and coherent flow structures and concerns the effect of boundary (i.e. inlet) conditions on the periodicity of the flow field in a representative inline mixer consisting of spatially periodic internal elements. The experimental setup is composed of an optically accessible vertical test section with transparent internal elements which is fed by a pressure-driven pipe flow containing tracer particles. The 3D streamlines, hence, the flow field, are measured by 3D Particle-Tracking Velocimetry technique. The streamwise development of the periodicity within few internal elements regardless of the inlet conditions has been proven by preliminary studies.

  16. Spatial variability of soil nitrogen in a hilly valley: Multiscale patterns and affecting factors.

    Science.gov (United States)

    Zhang, Shirong; Xia, Chunlan; Li, Ting; Wu, Chungui; Deng, Ouping; Zhong, Qinmei; Xu, Xiaoxun; Li, Yun; Jia, Yongxia

    2016-09-01

    Estimating the spatial distribution of soil nitrogen at different scales is crucial for improving soil nitrogen use efficiency and controlling nitrogen pollution. We evaluated the spatial variability of soil total nitrogen (TN) and available nitrogen (AN) in the Fujiang River Valley, a typical hilly region composed of low, medium and high hills in the central Sichuan Basin, China. We considered the two N forms at single hill, landscape and valley scales using a combined method of classical statistics, geostatistics and a geographic information system. The spatial patterns and grading areas of soil TN and AN were different among hill types and different scales. The percentages of higher grades of the two nitrogen forms decreased from low, medium to high hills. Hill type was a major factor determining the spatial variability of the two nitrogen forms across multiple scales in the valley. The main effects of general linear models indicated that the key affecting factors of soil TN and AN were hill type and fertilization at the single hill scale, hill type and soil type at the landscape scale, and hill type, slope position, parent material, soil type, land use and fertilization at the valley scale. Thus, the effects of these key factors on the two soil nitrogen forms became more significant with upscaling. Copyright © 2016 Elsevier B.V. All rights reserved.

  17. Spatial and temporal patterns of human Puumala virus (PUUV) infections in Germany.

    Science.gov (United States)

    Cunze, Sarah; Kochmann, Judith; Kuhn, Thomas; Frank, Raphael; Dörge, Dorian D; Klimpel, Sven

    2018-01-01

    Worldwide, the number of recorded human hantavirus infections as well as the number of affected countries is on the rise. In Europe, most human hantavirus infections are caused by the Puumala virus (PUUV), with bank voles ( Myodes glareolus ) as reservoir hosts. Generally, infection outbreaks have been related to environmental conditions, particularly climatic conditions, food supply for the reservoir species and land use. However, although attempts have been made, the insufficient availability of environmental data is often hampering accurate temporal and spatially explicit models of human hantavirus infections. In the present study, dynamics of human PUUV infections between 2001 and 2015 were explored using ArcGIS in order to identify spatio-temporal patterns. Percentage cover of forest area was identified as an important factor for the spatial pattern, whereas beech mast was found explaining temporal patterns of human PUUV infections in Germany. High numbers of infections were recorded in 2007, 2010 and 2012 and areas with highest records were located in Baden-Wuerttemberg (southwest Germany) and North Rhine-Westphalia (western Germany). More reliable data on reservoir host distribution, pathogen verification as well as an increased awareness of physicians are some of the factors that should improve future human infection risk assessments in Germany.

  18. Population ecology of Paepalanthus polyanthus (Bong. Kunth: temporal variation in the pattern of spatial distribution

    Directory of Open Access Journals (Sweden)

    Tânia Tarabini Castellani

    2004-11-01

    Full Text Available The temporal variation in density and pattern of spatial distribution of Paepalanthus polyanthus (BONG. Kunth (Eriocaulaceae were evaluated at a determinate sand dune. This study was carried out over a period of five years, at three permanent plots of 25m2 in a sand dune slack at Joaquina Beach, Florianópolis, SC, Brazil. There were strong density fluctuations throughout these years. In areas 1, 2 and 3, the densities changed from 10.4, 2.2 and 1.8 plants/m2 in December 1986 to 75.8, 11.4 and 45.6 plants/m2 in December 1991. Area 3, situated on an elevated site, presented greater variation in density, with no live plants in December 1989 and 102.2 plants/m2 at the recruitment observed in May 1990. Despite these density fluctuations, the pattern of spatial distribution was always aggregated (Id>1, P<0.05. The greatest Id values occurred in periods of low density and not in those of high density, associated with seedling recruitment. Factors such as high seed production with low dispersal, massive germination in moit years and a comparatively high death rate of seedlings at sites more subject to flooding or more distant from the water table proved themselves able to promote this aggregate pattern and increase it during plant development.

  19. Spatial and temporal patterns of human Puumala virus (PUUV infections in Germany

    Directory of Open Access Journals (Sweden)

    Sarah Cunze

    2018-02-01

    Full Text Available Background Worldwide, the number of recorded human hantavirus infections as well as the number of affected countries is on the rise. In Europe, most human hantavirus infections are caused by the Puumala virus (PUUV, with bank voles (Myodes glareolus as reservoir hosts. Generally, infection outbreaks have been related to environmental conditions, particularly climatic conditions, food supply for the reservoir species and land use. However, although attempts have been made, the insufficient availability of environmental data is often hampering accurate temporal and spatially explicit models of human hantavirus infections. Methods In the present study, dynamics of human PUUV infections between 2001 and 2015 were explored using ArcGIS in order to identify spatio-temporal patterns. Results Percentage cover of forest area was identified as an important factor for the spatial pattern, whereas beech mast was found explaining temporal patterns of human PUUV infections in Germany. High numbers of infections were recorded in 2007, 2010 and 2012 and areas with highest records were located in Baden-Wuerttemberg (southwest Germany and North Rhine-Westphalia (western Germany. Conclusion More reliable data on reservoir host distribution, pathogen verification as well as an increased awareness of physicians are some of the factors that should improve future human infection risk assessments in Germany.

  20. The effects of spatially heterogeneous prey distributions on detection patterns in foraging seabirds.

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    Octavio Miramontes

    Full Text Available Many attempts to relate animal foraging patterns to landscape heterogeneity are focused on the analysis of foragers movements. Resource detection patterns in space and time are not commonly studied, yet they are tightly coupled to landscape properties and add relevant information on foraging behavior. By exploring simple foraging models in unpredictable environments we show that the distribution of intervals between detected prey (detection statistics is mostly determined by the spatial structure of the prey field and essentially distinct from predator displacement statistics. Detections are expected to be Poissonian in uniform random environments for markedly different foraging movements (e.g. Lévy and ballistic. This prediction is supported by data on the time intervals between diving events on short-range foraging seabirds such as the thick-billed murre (Uria lomvia. However, Poissonian detection statistics is not observed in long-range seabirds such as the wandering albatross (Diomedea exulans due to the fractal nature of the prey field, covering a wide range of spatial scales. For this scenario, models of fractal prey fields induce non-Poissonian patterns of detection in good agreement with two albatross data sets. We find that the specific shape of the distribution of time intervals between prey detection is mainly driven by meso and submeso-scale landscape structures and depends little on the forager strategy or behavioral responses.

  1. Simulating spatial patterns of land-use change in Rondonia, Brazil

    International Nuclear Information System (INIS)

    Dale, V.H.; Southworth, F.; O'Neill, R.V.; Rosen, A.

    1992-01-01

    Large scale deforestation in the Brazilian state of Rondonia has resulted from massive colonization and has caused increases in atmospheric CO 2 , soil degradation, loss of extractive resources, and disruption of indigenous populations. A simulation model has been developed that integrates colonization, socioeconomic, and ecological submodels to estimate spatial patterns and rates of deforestation under different immigration policies, land tenure practices, and road development scenarios. It is used to model the socioeconomic causes and ecological impacts of rapid deforestation in Rondonia. The simulation can be used to identify scenarios that might optimize economic and agricultural sustainability or reduce emigration. Spatial analysis of the simulation projections shows that very different patterns of deforestation can result depending on whether soil suitability, distance to market or lot size is the prime factor affecting a colonist's choice of a lot. Projections of the amount and pattern of deforestation under specific scenarios of land-use choice and management can be used to explore the socioeconomic and ecological implications of land-use change

  2. Density, Spatial Pattern and Relief Features of Sacred Sites in Northern Morocco

    Directory of Open Access Journals (Sweden)

    Holger Jäckle

    2013-02-01

    Full Text Available Sacred sites are of conservation value because of their spiritual meaning, as cultural heritage and as remnants of near-natural biotopes in landscapes strongly transformed by man. The vegetation of sacred sites in Morocco was studied recently. Information about their number, spatial pattern or relief position is fragmentary. However, these parameters are important to evaluate their role as refuge for organisms and their representativeness of potential natural vegetation. Therefore, density and spatial pattern of sacred sites on the Tangier Peninsula in NW Morocco were studied based on records on topographic maps and by ground check. Their relief position was examined calculating a logistic regression model based on site-presences and random pseudo-absences. A ground check showed that around 67% of the existing sacred sites are documented in the topographic maps. They occur in the whole study area but are agglomerated around settlements. Although sacred sites occur with preference at elevated sites they can be found in almost all relief positions, thus offering the potential of supporting different types of climax vegetation (climatic climax and pedoclimax. Because of their abundance (around 29 sacred sites / 100 km² and their distribution pattern they could serve as elements of a biotope network in degraded landscapes.

  3. Effects of sampling interval on spatial patterns and statistics of watershed nitrogen concentration

    Science.gov (United States)

    Wu, S.-S.D.; Usery, E.L.; Finn, M.P.; Bosch, D.D.

    2009-01-01

    This study investigates how spatial patterns and statistics of a 30 m resolution, model-simulated, watershed nitrogen concentration surface change with sampling intervals from 30 m to 600 m for every 30 m increase for the Little River Watershed (Georgia, USA). The results indicate that the mean, standard deviation, and variogram sills do not have consistent trends with increasing sampling intervals, whereas the variogram ranges remain constant. A sampling interval smaller than or equal to 90 m is necessary to build a representative variogram. The interpolation accuracy, clustering level, and total hot spot areas show decreasing trends approximating a logarithmic function. The trends correspond to the nitrogen variogram and start to level at a sampling interval of 360 m, which is therefore regarded as a critical spatial scale of the Little River Watershed. Copyright ?? 2009 by Bellwether Publishing, Ltd. All right reserved.

  4. Multisubject Learning for Common Spatial Patterns in Motor-Imagery BCI

    Directory of Open Access Journals (Sweden)

    Dieter Devlaminck

    2011-01-01

    Full Text Available Motor-imagery-based brain-computer interfaces (BCIs commonly use the common spatial pattern filter (CSP as preprocessing step before feature extraction and classification. The CSP method is a supervised algorithm and therefore needs subject-specific training data for calibration, which is very time consuming to collect. In order to reduce the amount of calibration data that is needed for a new subject, one can apply multitask (from now on called multisubject machine learning techniques to the preprocessing phase. Here, the goal of multisubject learning is to learn a spatial filter for a new subject based on its own data and that of other subjects. This paper outlines the details of the multitask CSP algorithm and shows results on two data sets. In certain subjects a clear improvement can be seen, especially when the number of training trials is relatively low.

  5. Modelling Spatial Patterns and Drivers of Wildfires in Honduras Using Remote Sensing and Geographic Information Systems

    Science.gov (United States)

    Valdez Vasquez, M. C.; Chen, C. F.; Chiang, S. H.

    2016-12-01

    Forests in Honduras are one of the most important resources as they provide a wide range of environmental, economic, and social benefits. However, they are endangered as a result of the relentless occurrence of wildfires during the dry season. Despite the knowledge acquired by the population concerning the effects of wildfires, the frequency is increasing, a pattern attributable to the numerous ignition sources linked to human activity. The purpose of this study is to integrate the wildfire occurrences throughout the 2010-2015 period with a series of anthropogenic and non-anthropogenic variables using the random forest algorithm (RF). We use a series of variables that represent the anthropogenic activity, the flammability of vegetation, climatic conditions, and topography. To represent the anthropogenic activity, we included the continuous distances to rivers, roads, and settlements. To characterize the vegetation flammability, we used the normalized difference vegetation index (NDVI) and the normalized multi-band drought index (NMDI) acquired from MODIS surface reflectance data. Additionally, we included the topographical variables elevation, slope, and solar radiation derived from the ASTER global digital elevation model (GDEM V2). To represent the climatic conditions, we employed the land surface temperature (LST) product from the MODIS sensor and the WorldClim precipitation data. We analyzed the explanatory variables through native RF variable importance analysis and jackknife test, and the results revealed that the dry fuel conditions and low precipitation combined with the proximity to non-paved roads were the major drivers of wildfires. Furthermore, we predicted the areas with highest wildfire susceptibility, which are located mainly in the central and eastern regions of the country, within coniferous and mixed forests. Results acquired were validated using the area under the receiver operating characteristic (ROC) curve and the point biserial correlation

  6. Pattern classification of fMRI data: applications for analysis of spatially distributed cortical networks.

    Science.gov (United States)

    Yourganov, Grigori; Schmah, Tanya; Churchill, Nathan W; Berman, Marc G; Grady, Cheryl L; Strother, Stephen C

    2014-08-01

    The field of fMRI data analysis is rapidly growing in sophistication, particularly in the domain of multivariate pattern classification. However, the interaction between the properties of the analytical model and the parameters of the BOLD signal (e.g. signal magnitude, temporal variance and functional connectivity) is still an open problem. We addressed this problem by evaluating a set of pattern classification algorithms on simulated and experimental block-design fMRI data. The set of classifiers consisted of linear and quadratic discriminants, linear support vector machine, and linear and nonlinear Gaussian naive Bayes classifiers. For linear discriminant, we used two methods of regularization: principal component analysis, and ridge regularization. The classifiers were used (1) to classify the volumes according to the behavioral task that was performed by the subject, and (2) to construct spatial maps that indicated the relative contribution of each voxel to classification. Our evaluation metrics were: (1) accuracy of out-of-sample classification and (2) reproducibility of spatial maps. In simulated data sets, we performed an additional evaluation of spatial maps with ROC analysis. We varied the magnitude, temporal variance and connectivity of simulated fMRI signal and identified the optimal classifier for each simulated environment. Overall, the best performers were linear and quadratic discriminants (operating on principal components of the data matrix) and, in some rare situations, a nonlinear Gaussian naïve Bayes classifier. The results from the simulated data were supported by within-subject analysis of experimental fMRI data, collected in a study of aging. This is the first study that systematically characterizes interactions between analysis model and signal parameters (such as magnitude, variance and correlation) on the performance of pattern classifiers for fMRI. Copyright © 2014 Elsevier Inc. All rights reserved.

  7. Scale effects on spatially varying relationships between urban landscape patterns and water quality.

    Science.gov (United States)

    Sun, Yanwei; Guo, Qinghai; Liu, Jian; Wang, Run

    2014-08-01

    Scientific interpretation of the relationships between urban landscape patterns and water quality is important for sustainable urban planning and watershed environmental protection. This study applied the ordinary least squares regression model and the geographically weighted regression model to examine the spatially varying relationships between 12 explanatory variables (including three topographical factors, four land use parameters, and five landscape metrics) and 15 water quality indicators in watersheds of Yundang Lake, Maluan Bay, and Xinglin Bay with varying levels of urbanization in Xiamen City, China. A local and global investigation was carried out at the watershed-level, with 50 and 200 m riparian buffer scales. This study found that topographical features and landscape metrics are the dominant factors of water quality, while land uses are too weak to be considered as a strong influential factor on water quality. Such statistical results may be related with the characteristics of land use compositions in our study area. Water quality variations in the 50 m buffer were dominated by topographical variables. The impact of landscape metrics on water quality gradually strengthen with expanding buffer zones. The strongest relationships are obtained in entire watersheds, rather than in 50 and 200 m buffer zones. Spatially varying relationships and effective buffer zones were verified in this study. Spatially varying relationships between explanatory variables and water quality parameters are more diversified and complex in less urbanized areas than in highly urbanized areas. This study hypothesizes that all these varying relationships may be attributed to the heterogeneity of landscape patterns in different urban regions. Adjustment of landscape patterns in an entire watershed should be the key measure to successfully improving urban lake water quality.

  8. 18O Spatial Patterns of Vein Xylem Water, Leaf Water, and Dry Matter in Cotton Leaves

    Science.gov (United States)

    Gan, Kim Suan; Wong, Suan Chin; Yong, Jean Wan Hong; Farquhar, Graham Douglas

    2002-01-01

    Three leaf water models (two-pool model, Péclet effect, and string-of-lakes) were assessed for their robustness in predicting leaf water enrichment and its spatial heterogeneity. This was achieved by studying the 18O spatial patterns of vein xylem water, leaf water, and dry matter in cotton (Gossypium hirsutum) leaves grown at different humidities using new experimental approaches. Vein xylem water was collected from intact transpiring cotton leaves by pressurizing the roots in a pressure chamber, whereas the isotopic content of leaf water was determined without extracting it from fresh leaves with the aid of a purpose-designed leaf punch. Our results indicate that veins have a significant degree of lateral exchange with highly enriched leaf water. Vein xylem water is thus slightly, but progressively enriched in the direction of water flow. Leaf water enrichment is dependent on the relative distances from major veins, with water from the marginal and intercostal regions more enriched and that next to veins and near the leaf base more depleted than the Craig-Gordon modeled enrichment of water at the sites of evaporation. The spatial pattern of leaf water enrichment varies with humidity, as expected from the string-of-lakes model. This pattern is also reflected in leaf dry matter. All three models are realistic, but none could fully account for all of the facets of leaf water enrichment. Our findings acknowledge the presence of capacitance in the ground tissues of vein ribs and highlight the essential need to incorporate Péclet effects into the string-of-lakes model when applying it to leaves. PMID:12376664

  9. (18)O spatial patterns of vein xylem water, leaf water, and dry matter in cotton leaves.

    Science.gov (United States)

    Gan, Kim Suan; Wong, Suan Chin; Yong, Jean Wan Hong; Farquhar, Graham Douglas

    2002-10-01

    Three leaf water models (two-pool model, Péclet effect, and string-of-lakes) were assessed for their robustness in predicting leaf water enrichment and its spatial heterogeneity. This was achieved by studying the (18)O spatial patterns of vein xylem water, leaf water, and dry matter in cotton (Gossypium hirsutum) leaves grown at different humidities using new experimental approaches. Vein xylem water was collected from intact transpiring cotton leaves by pressurizing the roots in a pressure chamber, whereas the isotopic content of leaf water was determined without extracting it from fresh leaves with the aid of a purpose-designed leaf punch. Our results indicate that veins have a significant degree of lateral exchange with highly enriched leaf water. Vein xylem water is thus slightly, but progressively enriched in the direction of water flow. Leaf water enrichment is dependent on the relative distances from major veins, with water from the marginal and intercostal regions more enriched and that next to veins and near the leaf base more depleted than the Craig-Gordon modeled enrichment of water at the sites of evaporation. The spatial pattern of leaf water enrichment varies with humidity, as expected from the string-of-lakes model. This pattern is also reflected in leaf dry matter. All three models are realistic, but none could fully account for all of the facets of leaf water enrichment. Our findings acknowledge the presence of capacitance in the ground tissues of vein ribs and highlight the essential need to incorporate Péclet effects into the string-of-lakes model when applying it to leaves.

  10. Resilience of the spatial patterning of soil resources in creosote-encroached grassland

    Science.gov (United States)

    Sankey, J. B.; Ravi, S.; Collins, S. L.; Webb, R. H.

    2011-12-01

    Rangelands in arid and semi arid regions across the world are undergoing rapid vegetation shifts in response to complex interactions between climate and anthropogenic factors. These regions are also experiencing more frequent and intense disturbances such as fires and droughts. A comprehensive understanding of the changes in spatial patterning of soil resources accompanying these rapid vegetation changes and disturbances are needed to design sustainable management and conservation strategies. We investigated soil changes and vegetation structure along a shrub-grass transition zone at Sevilleta National Wildlife Refuge (NM, USA). We examined the extent to which fire promotes the redistribution of soil resources that might counter desertification induced by shrub encroachment. We specifically used high resolution digital elevation models of soil microtopography derived from terrestrial LiDAR to examine effects for treatments established 4 years previously in the creosote-encroached, blue and black grama grassland. Treatments were: 1) burned with prescribed fire, 2) unburned - vegetation removed, and 3) unburned - control. We additionally examined plots in adjacent grasslands that were not encroached by shrubs. Results suggest that surface roughness at cm-m length scales was lowest on the burned treatments, intermediate on the vegetation removal treatments, and greatest on the control treatments. Moreover, soil surface roughness had substantially differing spatial patterns in the homogeneous grasslands relative to the shrub-encroached grasslands. This work provides insight into the resilience (i.e., over 4 years of vegetation recovery) of the spatial patterning of soil resources in response to prescribed fire in the shrub-encroached grassland.

  11. Comparison of different statistical modelling approaches for deriving spatial air temperature patterns in an urban environment

    Science.gov (United States)

    Straub, Annette; Beck, Christoph; Breitner, Susanne; Cyrys, Josef; Geruschkat, Uta; Jacobeit, Jucundus; Kühlbach, Benjamin; Kusch, Thomas; Richter, Katja; Schneider, Alexandra; Umminger, Robin; Wolf, Kathrin

    2017-04-01

    Frequently spatial variations of air temperature of considerable magnitude occur within urban areas. They correspond to varying land use/land cover characteristics and vary with season, time of day and synoptic conditions. These temperature differences have an impact on human health and comfort directly by inducing thermal stress as well as indirectly by means of affecting air quality. Therefore, knowledge of the spatial patterns of air temperature in cities and the factors causing them is of great importance, e.g. for urban planners. A multitude of studies have shown statistical modelling to be a suitable tool for generating spatial air temperature patterns. This contribution presents a comparison of different statistical modelling approaches for deriving spatial air temperature patterns in the urban environment of Augsburg, Southern Germany. In Augsburg there exists a measurement network for air temperature and humidity currently comprising 48 stations in the city and its rural surroundings (corporately operated by the Institute of Epidemiology II, Helmholtz Zentrum München, German Research Center for Environmental Health and the Institute of Geography, University of Augsburg). Using different datasets for land surface characteristics (Open Street Map, Urban Atlas) area percentages of different types of land cover were calculated for quadratic buffer zones of different size (25, 50, 100, 250, 500 m) around the stations as well for source regions of advective air flow and used as predictors together with additional variables such as sky view factor, ground level and distance from the city centre. Multiple Linear Regression and Random Forest models for different situations taking into account season, time of day and weather condition were applied utilizing selected subsets of these predictors in order to model spatial distributions of mean hourly and daily air temperature deviations from a rural reference station. Furthermore, the different model setups were

  12. Using an autologistic regression model to identify spatial risk factors and spatial risk patterns of hand, foot and mouth disease (HFMD) in Mainland China

    Science.gov (United States)

    2014-01-01

    Background There have been large-scale outbreaks of hand, foot and mouth disease (HFMD) in Mainland China over the last decade. These events varied greatly across the country. It is necessary to identify the spatial risk factors and spatial distribution patterns of HFMD for public health control and prevention. Climate risk factors associated with HFMD occurrence have been recognized. However, few studies discussed the socio-economic determinants of HFMD risk at a space scale. Methods HFMD records in Mainland China in May 2008 were collected. Both climate and socio-economic factors were selected as potential risk exposures of HFMD. Odds ratio (OR) was used to identify the spatial risk factors. A spatial autologistic regression model was employed to get OR values of each exposures and model the spatial distribution patterns of HFMD risk. Results Results showed that both climate and socio-economic variables were spatial risk factors for HFMD transmission in Mainland China. The statistically significant risk factors are monthly average precipitation (OR = 1.4354), monthly average temperature (OR = 1.379), monthly average wind speed (OR = 1.186), the number of industrial enterprises above designated size (OR = 17.699), the population density (OR = 1.953), and the proportion of student population (OR = 1.286). The spatial autologistic regression model has a good goodness of fit (ROC = 0.817) and prediction accuracy (Correct ratio = 78.45%) of HFMD occurrence. The autologistic regression model also reduces the contribution of the residual term in the ordinary logistic regression model significantly, from 17.25 to 1.25 for the odds ratio. Based on the prediction results of the spatial model, we obtained a map of the probability of HFMD occurrence that shows the spatial distribution pattern and local epidemic risk over Mainland China. Conclusions The autologistic regression model was used to identify spatial risk factors and model spatial risk patterns of HFMD. HFMD

  13. Using an autologistic regression model to identify spatial risk factors and spatial risk patterns of hand, foot and mouth disease (HFMD) in Mainland China.

    Science.gov (United States)

    Bo, Yan-Chen; Song, Chao; Wang, Jin-Feng; Li, Xiao-Wen

    2014-04-14

    There have been large-scale outbreaks of hand, foot and mouth disease (HFMD) in Mainland China over the last decade. These events varied greatly across the country. It is necessary to identify the spatial risk factors and spatial distribution patterns of HFMD for public health control and prevention. Climate risk factors associated with HFMD occurrence have been recognized. However, few studies discussed the socio-economic determinants of HFMD risk at a space scale. HFMD records in Mainland China in May 2008 were collected. Both climate and socio-economic factors were selected as potential risk exposures of HFMD. Odds ratio (OR) was used to identify the spatial risk factors. A spatial autologistic regression model was employed to get OR values of each exposures and model the spatial distribution patterns of HFMD risk. Results showed that both climate and socio-economic variables were spatial risk factors for HFMD transmission in Mainland China. The statistically significant risk factors are monthly average precipitation (OR = 1.4354), monthly average temperature (OR = 1.379), monthly average wind speed (OR = 1.186), the number of industrial enterprises above designated size (OR = 17.699), the population density (OR = 1.953), and the proportion of student population (OR = 1.286). The spatial autologistic regression model has a good goodness of fit (ROC = 0.817) and prediction accuracy (Correct ratio = 78.45%) of HFMD occurrence. The autologistic regression model also reduces the contribution of the residual term in the ordinary logistic regression model significantly, from 17.25 to 1.25 for the odds ratio. Based on the prediction results of the spatial model, we obtained a map of the probability of HFMD occurrence that shows the spatial distribution pattern and local epidemic risk over Mainland China. The autologistic regression model was used to identify spatial risk factors and model spatial risk patterns of HFMD. HFMD occurrences were found to be spatially

  14. Spatial patterns of Bovine Corona Virus and Bovine Respiratory Syncytial Virus in the Swedish beef cattle population

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    Björkman Camilla

    2010-05-01

    Full Text Available Abstract Background Both bovine coronavirus (BCV and bovine respiratory syncytial virus (BRSV infections are currently wide-spread in the Swedish dairy cattle population. Surveys of antibody levels in bulk tank milk have shown very high nationwide prevalences of both BCV and BRSV, with large variations between regions. In the Swedish beef cattle population however, no investigations have yet been performed regarding the prevalence and geographical distribution of BCV and BRSV. A cross-sectional serological survey for BCV and BRSV was carried out in Swedish beef cattle to explore any geographical patterns of these infections. Methods Blood samples were collected from 2,763 animals located in 2,137 herds and analyzed for presence of antibodies to BCV and BRSV. Moran's I was calculated to assess spatial autocorrelation, and identification of geographical cluster was performed using spatial scan statistics. Results Animals detected positive to BCV or BRSV were predominately located in the central-western and some southern parts of Sweden. Moran's I indicated global spatial autocorrelation. BCV and BRSV appeared to be spatially related: two areas in southern Sweden (Skaraborg and Skåne had a significantly higher prevalence of BCV (72.5 and 65.5% respectively; almost the same two areas were identified as being high-prevalence clusters for BRSV (69.2 and 66.8% respectively. An area in south-east Sweden (Kronoberg-Blekinge had lower prevalences for both infections than expected (23.8 and 20.7% for BCV and BRSV respectively. Another area in middle-west Sweden (Värmland-Dalarna had also a lower prevalence for BRSV (7.9%. Areas with beef herd density > 10 per 100 km2 were found to be at significantly higher risk of being part of high-prevalence clusters. Conclusion These results form a basis for further investigations of between-herds dynamics and risk factors for these infections in order to design effective control strategies.

  15. Spatial patterns and secular trends in human leishmaniasis incidence in Morocco between 2003 and 2013.

    Science.gov (United States)

    Sadeq, Mina

    2016-05-11

    Few studies on spatial patterns or secular trends in human leishmanias have been conducted in Morocco. This study aimed to examine spatial patterns and trends associated with the human leishmaniasis incidence rate (HLIR) at the province/prefecture level between 2003 and 2013 in Morocco. Only the available published country data on the HLIR between 2003 and 2013, from the open access files of the Ministry of Health, were used. Secular trends were examined using Kendall's rank correlation. An exploratory spatial data analysis was also conducted to examine the spatial autocorrelation (Global Moran's I and local indicator of spatial association [LISA]), and spatial diffusion at the province/prefecture level. The influence of various covariates (poverty rate, vulnerability rate, population density, and urbanization) on the HLIR was tested via spatial regression (ordinary least squares regression). At the country level, no secular variation was observed. Poisson annual incidence rate estimates were 13 per 100 000 population (95 % CI = 12.9-13.1) for cutaneous leishmaniasis (CL) and 0.4 per 100 000 population (95 % CI = 0.4-0.5) for visceral leishmaniasis (VL). The available data on HLIR were based on combined CL and VL cases, however, as the CL cases totally outnumbered the VL ones, HLIR may be considered as CL incidence rate. At the provincial level, a secular increase in the incidence rate was observed in Al Hoceima (P = 0.008), Taounate (P = 0.04), Larache (P = 0.002), Tétouan (P = 0.0003), Khenifra (P = 0.008), Meknes (P = 0.03), and El Kelaa (P = 0.0007), whereas a secular decrease was observed only in the Chichaoua province (P = 0.006). Even though increased or decreased rate was evident in these provinces, none of them showed clustering of leishmaniasis incidence. Significant spatial clusters of high leishmaniasis incidence were located in the northeastern part of Morocco, while spatial clusters of low leishmaniasis

  16. Using an autologistic regression model to identify spatial risk factors and spatial risk patterns of hand, foot and mouth disease (HFMD) in Mainland China

    OpenAIRE

    Bo, Yan-Chen; Song, Chao; Wang, Jin-Feng; Li, Xiao-Wen

    2014-01-01

    Background There have been large-scale outbreaks of hand, foot and mouth disease (HFMD) in Mainland China over the last decade. These events varied greatly across the country. It is necessary to identify the spatial risk factors and spatial distribution patterns of HFMD for public health control and prevention. Climate risk factors associated with HFMD occurrence have been recognized. However, few studies discussed the socio-economic determinants of HFMD risk at a space scale. Methods HFMD re...

  17. Spatial Pattern of Residential Carbon Dioxide Emissions in a Rapidly Urbanizing Chinese City and Its Mismatch Effect

    Directory of Open Access Journals (Sweden)

    Heli Lu

    2018-03-01

    Full Text Available Cities undergoing rapid urbanization are characterized by quick successions of spatiotemporal patterns, meaning that traditional methods cannot adequately assess carbon emissions from urban residential areas, which prevents the study of spatial mismatch. Therefore, this study utilizes night-time lights to construct a spatial emissions model that enables the analysis of the evolution of emissions patterns in China. The results indicate that, compared to the traditional method, the spatial modeling based on night-time lights reflects the spatial emissions trajectories in a more timely and accurate manner in rapidly urbanizing cities. Additionally, we found a relatively low degree of spatial match between emissions and economic activities, with the former, which are greatly affected by urbanization, having a larger dynamism and instability than the latter. Such spatial mismatch effect illustrates that policy makers should focus on factors beyond economics in order to reduce residential carbon emissions during China’s rapid urbanization process.

  18. Repeated Sleep Restriction in Adolescent Rats Altered Sleep Patterns and Impaired Spatial Learning/Memory Ability

    Science.gov (United States)

    Yang, Su-Rong; Sun, Hui; Huang, Zhi-Li; Yao, Ming-Hui; Qu, Wei-Min

    2012-01-01

    Study Objectives: To investigate possible differences in the effect of repeated sleep restriction (RSR) during adolescence and adulthood on sleep homeostasis and spatial learning and memory ability. Design: The authors examined electroencephalograms of rats as they were subjected to 4-h daily sleep deprivation that continued for 7 consecutive days and assessed the spatial learning and memory by Morris water maze test (WMT). Participants: Adolescent and adult rats. Measurements and Results: Adolescent rats exhibited a similar amount of rapid eye movement (REM) and nonrapid eye movement (NREM) sleep with higher slow wave activity (SWA, 0.5-4 Hz) and fewer episodes and conversions with prolonged durations, indicating they have better sleep quality than adult rats. After RSR, adult rats showed strong rebound of REM sleep by 31% on sleep deprivation day 1; this value was 37% on sleep deprivation day 7 in adolescents compared with 20-h baseline level. On sleep deprivation day 7, SWA in adult and adolescent rats increased by 47% and 33%, and such elevation lasted for 5 h and 7 h, respectively. Furthermore, the authors investigated the effects of 4-h daily sleep deprivation immediately after the water maze training sessions on spatial cognitive performance. Adolescent rats sleep-restricted for 7 days traveled a longer distance to find the hidden platform during the acquisition training and had fewer numbers of platform crossings in the probe trial than those in the control group, something that did not occur in the sleep-deprived adult rats. Conclusions: Repeated sleep restriction (RSR) altered sleep profiles and mildly impaired spatial learning and memory capability in adolescent rats. Citation: Yang SR; Sun H; Huang ZL; Yao MH; Qu WM. Repeated sleep restriction in adolescent rats altered sleep patterns and impaired spatial learning/memory ability. SLEEP 2012;35(6):849-859. PMID:22654204

  19. Sex-biased dispersal patterns depend on the spatial scale in a social rodent

    Science.gov (United States)

    Gauffre, B.; Petit, E.; Brodier, S.; Bretagnolle, V.; Cosson, J. F.

    2009-01-01

    Dispersal is a fundamental process in ecology because it influences the dynamics, genetic structure and persistence of populations. Furthermore, understanding the evolutionary causes of dispersal pattern, particularly when they differ between genders, is still a major question in evolutionary ecology. Using a panel of 10 microsatellite loci, we investigated at different spatial scales the genetic structure and the sex-specific dispersal patterns in the common vole Microtus arvalis, a small colonial mammal. This study was conducted in an intensive agricultural area of western France. Hierarchical FST analyses, relatedness and assignment tests suggested (i) that females are strongly kin-clustered within colonies; (ii) that dispersal is strongly male-biased at a local scale; and (iii) long-distance dispersal is not rare and more balanced between genders. We conclude that males migrate continuously from colony to colony to reproduce, whereas females may disperse just once and would be mainly involved in new colony foundation. PMID:19586945

  20. Spatial and directional control of self-assembled wrinkle patterns by UV light absorption

    Science.gov (United States)

    Kortz, C.; Oesterschulze, E.

    2017-12-01

    Wrinkle formation on surfaces is a phenomenon that is observed in layered systems with a compressed elastic thin capping layer residing on a viscoelastic film. So far, the properties of the viscoelastic material could only be changed replacing it by another material. Here, we propose to use a photosensitive material whose viscoelastic properties, Young's modulus, and glass transition temperature can easily be adjusted by the absorption of UV light. Employing UV lithography masks during the exposure, we gain additionally spatial and directional control of the self-assembled wrinkle pattern formation that relies on a spinodal decomposition process. Inspired by the results on surface wrinkling and its dependence on the intrinsic stress, we also derive a method to avoid wrinkling locally by tailoring the mechanical stress distribution in the layered system choosing UV masks with convex patterns. This is of particular interest in technical applications where the buckling of surfaces is undesirable.

  1. Comparison of tests for spatial heterogeneity on data with global clustering patterns and outliers

    Directory of Open Access Journals (Sweden)

    Hachey Mark

    2009-10-01

    Full Text Available Abstract Background The ability to evaluate geographic heterogeneity of cancer incidence and mortality is important in cancer surveillance. Many statistical methods for evaluating global clustering and local cluster patterns are developed and have been examined by many simulation studies. However, the performance of these methods on two extreme cases (global clustering evaluation and local anomaly (outlier detection has not been thoroughly investigated. Methods We compare methods for global clustering evaluation including Tango's Index, Moran's I, and Oden's I*pop; and cluster detection methods such as local Moran's I and SaTScan elliptic version on simulated count data that mimic global clustering patterns and outliers for cancer cases in the continental United States. We examine the power and precision of the selected methods in the purely spatial analysis. We illustrate Tango's MEET and SaTScan elliptic version on a 1987-2004 HIV and a 1950-1969 lung cancer mortality data in the United States. Results For simulated data with outlier patterns, Tango's MEET, Moran's I and I*pop had powers less than 0.2, and SaTScan had powers around 0.97. For simulated data with global clustering patterns, Tango's MEET and I*pop (with 50% of total population as the maximum search window had powers close to 1. SaTScan had powers around 0.7-0.8 and Moran's I has powers around 0.2-0.3. In the real data example, Tango's MEET indicated the existence of global clustering patterns in both the HIV and lung cancer mortality data. SaTScan found a large cluster for HIV mortality rates, which is consistent with the finding from Tango's MEET. SaTScan also found clusters and outliers in the lung cancer mortality data. Conclusion SaTScan elliptic version is more efficient for outlier detection compared with the other methods evaluated in this article. Tango's MEET and Oden's I*pop perform best in global clustering scenarios among the selected methods. The use of SaTScan for

  2. Morphology and spatial patterns of Macrotermes mounds in the SE Katanga, D.R. Congo

    Science.gov (United States)

    Bazirake Mujinya, Basile; Mees, Florias; Erens, Hans; Baert, Geert; Van Ranst, Eric

    2015-04-01

    The spatial distribution patterns and morphological characteristics of Macrotermes falciger mounds were investigated in the Lubumbashi area, D.R. Congo. Examination of the spatial patterns of M. falciger mounds on high resolution satellite images reveals a mean areal number density of 2.9 ± 0.4 mounds ha-1. The high relative number of inactive mounds in the region, along with their regular distribution pattern, suggests that current termite mound occurrences are largely palaeostructures. Mound positions in the habitat are consistent with intraspecific competition rather than soil and substrate characteristics as controlling factor. Detailed morphological description of five deep termite-mound profiles (~7 m height/depth) shows that carbonate pedofeatures are present in all studied profiles, in contrast to the control soils. They mainly occur in the form of soft powdery masses, nodules and coatings on ped faces, all clearly pedogenic. Carbonate coatings occur mainly between 1 m above the soil surface and 1 m below that level in all mound profiles. Carbonate nodules do show a different distribution pattern at each site. Furthermore, when the studied profiles are considered to represent a toposequence, the stone layer occurs at greater depth in topographically low areas compared to crest and slope positions, which is mainly conditioned by erosion. The clay content of epigeal mounds increases from the summit to the toe slope, which can be largely related to differences in parent material. The Mn-Fe oxide concentrations occurring in all studied termite mound profiles reflect a seasonally high perched water table beneath the mound, which is more pronounced at the lower slope positions.

  3. Exploring the Linkage between Urban Flood Risk and Spatial Patterns in Small Urbanized Catchments of Beijing, China

    Directory of Open Access Journals (Sweden)

    Lei Yao

    2017-02-01

    Full Text Available In the context of global urbanization, urban flood risk in many cities has become a serious environmental issue, threatening the health of residents and the environment. A number of hydrological studies have linked urban flooding issues closely to the spectrum of spatial patterns of urbanization, but relatively little attention has been given to small-scale catchments within the realm of urban systems. This study aims to explore the hydrological effects of small-scaled urbanized catchments assigned with various landscape patterns. Twelve typical residential catchments in Beijing were selected as the study areas. Total Impervious Area (TIA, Directly Connected Impervious Area (DCIA, and a drainage index were used as the catchment spatial metrics. Three scenarios were designed as different spatial arrangement of catchment imperviousness. Runoff variables including total and peak runoff depth (Qt and Qp were simulated by using Strom Water Management Model (SWMM. The relationship between catchment spatial patterns and runoff variables were determined, and the results demonstrated that, spatial patterns have inherent influences on flood risks in small urbanized catchments. Specifically: (1 imperviousness acts as an effective indicator in affecting both Qt and Qp; (2 reducing the number of rainwater inlets appropriately will benefit the catchment peak flow mitigation; (3 different spatial concentrations of impervious surfaces have inherent influences on Qp. These findings provide insights into the role of urban spatial patterns in driving rainfall-runoff processes in small urbanized catchments, which is essential for urban planning and flood management.

  4. Exploring the Linkage between Urban Flood Risk and Spatial Patterns in Small Urbanized Catchments of Beijing, China.

    Science.gov (United States)

    Yao, Lei; Chen, Liding; Wei, Wei

    2017-02-28

    In the context of global urbanization, urban flood risk in many cities has become a serious environmental issue, threatening the health of residents and the environment. A number of hydrological studies have linked urban flooding issues closely to the spectrum of spatial patterns of urbanization, but relatively little attention has been given to small-scale catchments within the realm of urban systems. This study aims to explore the hydrological effects of small-scaled urbanized catchments assigned with various landscape patterns. Twelve typical residential catchments in Beijing were selected as the study areas. Total Impervious Area ( TIA ), Directly Connected Impervious Area ( DCIA ), and a drainage index were used as the catchment spatial metrics. Three scenarios were designed as different spatial arrangement of catchment imperviousness. Runoff variables including total and peak runoff depth ( Q t and Q p ) were simulated by using Strom Water Management Model (SWMM). The relationship between catchment spatial patterns and runoff variables were determined, and the results demonstrated that, spatial patterns have inherent influences on flood risks in small urbanized catchments. Specifically: (1) imperviousness acts as an effective indicator in affecting both Q t and Q p ; (2) reducing the number of rainwater inlets appropriately will benefit the catchment peak flow mitigation; (3) different spatial concentrations of impervious surfaces have inherent influences on Q p . These findings provide insights into the role of urban spatial patterns in driving rainfall-runoff processes in small urbanized catchments, which is essential for urban planning and flood management.

  5. Spatial Patterns of Ischemic Heart Disease in Shenzhen, China: A Bayesian Multi-Disease Modelling Approach to Inform Health Planning Policies.

    Science.gov (United States)

    Du, Qingyun; Zhang, Mingxiao; Li, Yayan; Luan, Hui; Liang, Shi; Ren, Fu

    2016-04-20

    Incorporating the information of hypertension, this paper applies Bayesian multi-disease analysis to model the spatial patterns of Ischemic Heart Disease (IHD) risks. Patterns of harmful alcohol intake (HAI) and overweight/obesity are also modelled as they are common risk factors contributing to both IHD and hypertension. The hospitalization data of IHD and hypertension in 2012 were analyzed with three Bayesian multi-disease models at the sub-district level of Shenzhen. Results revealed that the IHD high-risk cluster shifted slightly north-eastward compared with the IHD Standardized Hospitalization Ratio (SHR). Spatial variations of overweight/obesity and HAI were found to contribute most to the IHD patterns. Identified patterns of IHD risk would benefit IHD integrated prevention. Spatial patterns of overweight/obesity and HAI could supplement the current disease surveillance system by providing information about small-area level risk factors, and thus benefit integrated prevention of related chronic diseases. Middle southern Shenzhen, where high risk of IHD, overweight/obesity, and HAI are present, should be prioritized for interventions, including alcohol control, innovative healthy diet toolkit distribution, insurance system revision, and community-based chronic disease intervention. Related health resource planning is also suggested to focus on these areas first.

  6. Spatial Patterns of Ischemic Heart Disease in Shenzhen, China: A Bayesian Multi-Disease Modelling Approach to Inform Health Planning Policies

    Science.gov (United States)

    Du, Qingyun; Zhang, Mingxiao; Li, Yayan; Luan, Hui; Liang, Shi; Ren, Fu

    2016-01-01

    Incorporating the information of hypertension, this paper applies Bayesian multi-disease analysis to model the spatial patterns of Ischemic Heart Disease (IHD) risks. Patterns of harmful alcohol intake (HAI) and overweight/obesity are also modelled as they are common risk factors contributing to both IHD and hypertension. The hospitalization data of IHD and hypertension in 2012 were analyzed with three Bayesian multi-disease models at the sub-district level of Shenzhen. Results revealed that the IHD high-risk cluster shifted slightly north-eastward compared with the IHD Standardized Hospitalization Ratio (SHR). Spatial variations of overweight/obesity and HAI were found to contribute most to the IHD patterns. Identified patterns of IHD risk would benefit IHD integrated prevention. Spatial patterns of overweight/obesity and HAI could supplement the current disease surveillance system by providing information about small-area level risk factors, and thus benefit integrated prevention of related chronic diseases. Middle southern Shenzhen, where high risk of IHD, overweight/obesity, and HAI are present, should be prioritized for interventions, including alcohol control, innovative healthy diet toolkit distribution, insurance system revision, and community-based chronic disease intervention. Related health resource planning is also suggested to focus on these areas first. PMID:27104551

  7. Spatial Patterns of Ischemic Heart Disease in Shenzhen, China: A Bayesian Multi-Disease Modelling Approach to Inform Health Planning Policies

    Directory of Open Access Journals (Sweden)

    Qingyun Du

    2016-04-01

    Full Text Available Incorporating the information of hypertension, this paper applies Bayesian multi-disease analysis to model the spatial patterns of Ischemic Heart Disease (IHD risks. Patterns of harmful alcohol intake (HAI and overweight/obesity are also modelled as they are common risk factors contributing to both IHD and hypertension. The hospitalization data of IHD and hypertension in 2012 were analyzed with three Bayesian multi-disease models at the sub-district level of Shenzhen. Results revealed that the IHD high-risk cluster shifted slightly north-eastward compared with the IHD Standardized Hospitalization Ratio (SHR. Spatial variations of overweight/obesity and HAI were found to contribute most to the IHD patterns. Identified patterns of IHD risk would benefit IHD integrated prevention. Spatial patterns of overweight/obesity and HAI could supplement the current disease surveillance system by providing information about small-area level risk factors, and thus benefit integrated prevention of related chronic diseases. Middle southern Shenzhen, where high risk of IHD, overweight/obesity, and HAI are present, should be prioritized for interventions, including alcohol control, innovative healthy diet toolkit distribution, insurance system revision, and community-based chronic disease intervention. Related health resource planning is also suggested to focus on these areas first.

  8. Changes in spatial patterns of Caragana stenophylla along a climatic drought gradient on the Inner Mongolian Plateau.

    Science.gov (United States)

    Xie, Li-Na; Guo, Hong-Yu; Gabler, Christopher A; Li, Qing-Fang; Ma, Cheng-Cang

    2015-01-01

    Few studies have investigated the influence of water availability on plant population spatial patterns. We studied changes in the spatial patterns of Caragana stenophylla along a climatic drought gradient within the Inner Mongolian Plateau, China. We examined spatial patterns, seed density, "nurse effects" of shrubs on seedlings, transpiration rates and water use efficiency (WUE) of C. stenophylla across semi-arid, arid, and intensively arid zones. Our results showed that patches of C. stenophylla populations shifted from a random to a clumped spatial pattern towards drier environments. Seed density and seedling survival rate of C. stenophylla decreased from the semi-arid zone to the intensively arid zone. Across the three zones, there were more C. stenophylla seeds and seedlings underneath shrub canopies than outside shrub canopies; and in the intensively arid zone, there were almost no seeds or seedlings outside shrub canopies. Transpiration rates of outer-canopy leaves and WUE of both outer-canopy and inner-canopy leaves increased from the semi-arid zone to the intensively arid zone. In the intensively arid zone, transpiration rates and WUE of inner-canopy leaves were significantly lower and higher, respectively, than those of outer-canopy leaves. We conclude that, as drought stress increased, seed density decreased, seed proportions inside shrubs increased, and "nurse effects" of shrubs on seedlings became more important. These factors, combined with water-saving characteristics associated with clumped spatial patterns, are likely driving the changes in C. stenophylla spatial patterns.

  9. Patterns of Spatial Variation of Assemblages Associated with Intertidal Rocky Shores: A Global Perspective

    Science.gov (United States)

    Cruz-Motta, Juan José; Miloslavich, Patricia; Palomo, Gabriela; Iken, Katrin; Konar, Brenda; Pohle, Gerhard; Trott, Tom; Benedetti-Cecchi, Lisandro; Herrera, César; Hernández, Alejandra; Sardi, Adriana; Bueno, Andrea; Castillo, Julio; Klein, Eduardo; Guerra-Castro, Edlin; Gobin, Judith; Gómez, Diana Isabel; Riosmena-Rodríguez, Rafael; Mead, Angela; Bigatti, Gregorio; Knowlton, Ann; Shirayama, Yoshihisa

    2010-01-01

    Assemblages associated with intertidal rocky shores were examined for large scale distribution patterns with specific emphasis on identifying latitudinal trends of species richness and taxonomic distinctiveness. Seventy-two sites distributed around the globe were evaluated following the standardized sampling protocol of the Census of Marine Life NaGISA project (www.nagisa.coml.org). There were no clear patterns of standardized estimators of species richness along latitudinal gradients or among Large Marine Ecosystems (LMEs); however, a strong latitudinal gradient in taxonomic composition (i.e., proportion of different taxonomic groups in a given sample) was observed. Environmental variables related to natural influences were strongly related to the distribution patterns of the assemblages on the LME scale, particularly photoperiod, sea surface temperature (SST) and rainfall. In contrast, no environmental variables directly associated with human influences (with the exception of the inorganic pollution index) were related to assemblage patterns among LMEs. Correlations of the natural assemblages with either latitudinal gradients or environmental variables were equally strong suggesting that neither neutral models nor models based solely on environmental variables sufficiently explain spatial variation of these assemblages at a global scale. Despite the data shortcomings in this study (e.g., unbalanced sample distribution), we show the importance of generating biological global databases for the use in large-scale diversity comparisons of rocky intertidal assemblages to stimulate continued sampling and analyses. PMID:21179546

  10. Patterns of spatial variation of assemblages associated with intertidal rocky shores: a global perspective.

    Directory of Open Access Journals (Sweden)

    Juan José Cruz-Motta

    2010-12-01

    Full Text Available Assemblages associated with intertidal rocky shores were examined for large scale distribution patterns with specific emphasis on identifying latitudinal trends of species richness and taxonomic distinctiveness. Seventy-two sites distributed around the globe were evaluated following the standardized sampling protocol of the Census of Marine Life NaGISA project (www.nagisa.coml.org. There were no clear patterns of standardized estimators of species richness along latitudinal gradients or among Large Marine Ecosystems (LMEs; however, a strong latitudinal gradient in taxonomic composition (i.e., proportion of different taxonomic groups in a given sample was observed. Environmental variables related to natural influences were strongly related to the distribution patterns of the assemblages on the LME scale, particularly photoperiod, sea surface temperature (SST and rainfall. In contrast, no environmental variables directly associated with human influences (with the exception of the inorganic pollution index were related to assemblage patterns among LMEs. Correlations of the natural assemblages with either latitudinal gradients or environmental variables were equally strong suggesting that neither neutral models nor models based solely on environmental variables sufficiently explain spatial variation of these assemblages at a global scale. Despite the data shortcomings in this study (e.g., unbalanced sample distribution, we show the importance of generating biological global databases for the use in large-scale diversity comparisons of rocky intertidal assemblages to stimulate continued sampling and analyses.

  11. Size matters: point pattern analysis biases the estimation of spatial properties of stomata distribution.

    Science.gov (United States)

    Naulin, Paulette I; Valenzuela, Gerardo; Estay, Sergio A

    2017-03-01

    Stomata distribution is an example of biological patterning. Formal methods used to study stomata patterning are generally based on point-pattern analysis, which assumes that stomata are points and ignores the constraints imposed by size on the placement of neighbors. The inclusion of size in the analysis requires the use of a null model based on finite-size object geometry. In this study, we compare the results obtained by analyzing samples from several species using point and disc null models. The results show that depending on the null model used, there was a 20% reduction in the number of samples classified as uniform; these results suggest that stomata patterning is not as general as currently reported. Some samples changed drastically from being classified as uniform to being classified as clustered. In samples of Arabidopsis thaliana, only the disc model identified clustering at high densities of stomata. This reinforces the importance of selecting an appropriate null model to avoid incorrect inferences about underlying biological mechanisms. Based on the results gathered here, we encourage researchers to abandon point-pattern analysis when studying stomata patterning; more realistic conclusions can be drawn from finite-size object analysis. © 2016 The Authors. New Phytologist © 2016 New Phytologist Trust.

  12. Analyzing key constraints to biogas production from crop residues and manure in the EU—A spatially explicit model

    Science.gov (United States)

    Persson, U. Martin

    2017-01-01

    This paper presents a spatially explicit method for making regional estimates of the potential for biogas production from crop residues and manure, accounting for key technical, biochemical, environmental and economic constraints. Methods for making such estimates are important as biofuels from agricultural residues are receiving increasing policy support from the EU and major biogas producers, such as Germany and Italy, in response to concerns over unintended negative environmental and social impacts of conventional biofuels. This analysis comprises a spatially explicit estimate of crop residue and manure production for the EU at 250 m resolution, and a biogas production model accounting for local constraints such as the sustainable removal of residues, transportation of substrates, and the substrates’ biochemical suitability for anaerobic digestion. In our base scenario, the EU biogas production potential from crop residues and manure is about 0.7 EJ/year, nearly double the current EU production of biogas from agricultural substrates, most of which does not come from residues or manure. An extensive sensitivity analysis of the model shows that the potential could easily be 50% higher or lower, depending on the stringency of economic, technical and biochemical constraints. We find that the potential is particularly sensitive to constraints on the substrate mixtures’ carbon-to-nitrogen ratio and dry matter concentration. Hence, the potential to produce biogas from crop residues and manure in the EU depends to large extent on the possibility to overcome the challenges associated with these substrates, either by complementing them with suitable co-substrates (e.g. household waste and energy crops), or through further development of biogas technology (e.g. pretreatment of substrates and recirculation of effluent). PMID:28141827

  13. Fano lineshapes of 'Peak-tracking chip' spatial profiles analyzed with correlation analysis for bioarray imaging and refractive index sensing

    KAUST Repository

    Bougot-Robin, K.

    2013-05-22

    The asymmetric Fano resonance lineshapes, resulting from interference between background and a resonant scattering, is archetypal in resonant waveguide grating (RWG) reflectivity. Resonant profile shift resulting from a change of refractive index (from fluid medium or biomolecules at the chip surface) is classically used to perform label-free sensing. Lineshapes are sometimes sampled at discretized “detuning” values to relax instrumental demands, the highest reflectivity element giving a coarse resonance estimate. A finer extraction, needed to increase sensor sensitivity, can be obtained using a correlation approach, correlating the sensed signal to a zero-shifted reference signal. Fabrication process is presented leading to discrete Fano profiles. Our findings are illustrated with resonance profiles from silicon nitride RWGs operated at visible wavelengths. We recently demonstrated that direct imaging multi-assay RWGs sensing may be rendered more reliable using “chirped” RWG chips, by varying a RWG structure parameter. Then, the spatial reflectivity profiles of tracks composed of RWGs units with slowly varying filling factor (thus slowly varying resonance condition) are measured under monochromatic conditions. Extracting the resonance location using spatial Fano profiles allows multiplex refractive index based sensing. Discretization and sensitivity are discussed both through simulation and experiment for different filling factor variation, here Δf=0.0222 and Δf=0.0089. This scheme based on a “Peak-tracking chip” demonstrates a new technique for bioarray imaging using a simpler set-up that maintains high performance with cheap lenses, with down to Δn=2×10-5 RIU sensitivity for the highest sampling of Fano lineshapes. © (2013) COPYRIGHT Society of Photo-Optical Instrumentation Engineers (SPIE). Downloading of the abstract is permitted for personal use only.

  14. Analyzing key constraints to biogas production from crop residues and manure in the EU-A spatially explicit model.

    Directory of Open Access Journals (Sweden)

    Rasmus Einarsson

    Full Text Available This paper presents a spatially explicit method for making regional estimates of the potential for biogas production from crop residues and manure, accounting for key technical, biochemical, environmental and economic constraints. Methods for making such estimates are important as biofuels from agricultural residues are receiving increasing policy support from the EU and major biogas producers, such as Germany and Italy, in response to concerns over unintended negative environmental and social impacts of conventional biofuels. This analysis comprises a spatially explicit estimate of crop residue and manure production for the EU at 250 m resolution, and a biogas production model accounting for local constraints such as the sustainable removal of residues, transportation of substrates, and the substrates' biochemical suitability for anaerobic digestion. In our base scenario, the EU biogas production potential from crop residues and manure is about 0.7 EJ/year, nearly double the current EU production of biogas from agricultural substrates, most of which does not come from residues or manure. An extensive sensitivity analysis of the model shows that the potential could easily be 50% higher or lower, depending on the stringency of economic, technical and biochemical constraints. We find that the potential is particularly sensitive to constraints on the substrate mixtures' carbon-to-nitrogen ratio and dry matter concentration. Hence, the potential to produce biogas from crop residues and manure in the EU depends to large extent on the possibility to overcome the challenges associated with these substrates, either by complementing them with suitable co-substrates (e.g. household waste and energy crops, or through further development of biogas technology (e.g. pretreatment of substrates and recirculation of effluent.

  15. Considerations of scale in the analysis of spatial pattern of plant disease epidemics.

    Science.gov (United States)

    Turechek, William W; McRoberts, Neil

    2013-01-01

    Scale is an important but somewhat neglected subject in plant pathology. Scale serves as an abstract concept, providing a framework for organizing observations and theoretical models, and plays a functional role in the organization of ecological communities and physical processes. Rich methodological resources are available to plant pathologists interested in considering either or both aspects of scale in their research. We summarize important concepts in both areas of the literature, particularly as they apply to the spatial pattern of plant disease, and highlight some new results that emphasize the importance of scaling on the emergence of different types of probability distribution in empirical observation. We also highlight the important links between heterogeneity and scale, which are of central importance in plant disease epidemiology and the analysis of spatial pattern. We consider statistical approaches that are available, where actual physical scale is known, and for more conceptual research on hierarchies, where scale plays a more abstract role, particularly for field-based research. For the latter, we highlight methods that plant pathologists could consider to account for the effect of scale in the design of field studies.

  16. Mixed-Severity Fire Fosters Heterogeneous Spatial Patterns of Conifer Regeneration in a Dry Conifer Forest

    Directory of Open Access Journals (Sweden)

    Sparkle L. Malone

    2018-01-01

    Full Text Available We examined spatial patterns of post-fire regenerating conifers in a Colorado, USA, dry conifer forest 11–12 years following the reintroduction of mixed-severity fire. We mapped and measured all post-fire regenerating conifers, as well as all other post-fire regenerating trees and all residual (i.e., surviving trees, in three 4-ha plots following the 2002 Hayman Fire. Residual tree density ranged from 167 to 197 trees ha−1 (TPH, and these trees were clustered at distances up to 30 m. Post-fire regenerating conifers, which ranged in density from 241 to 1036 TPH, were also clustered at distances up to at least 30 m. Moreover, residual tree locations drove post-fire regenerating conifer locations, with the two showing a pattern of repulsion. Topography and post-fire sprouting tree species locations further drove post-fire conifer regeneration locations. These results provide a foundation for anticipating how the reintroduction of mixed-severity fire may affect long-term forest structure, and also yield insights into how historical mixed-severity fire may have regulated the spatially heterogeneous conditions commonly described for pre-settlement dry conifer forests of Colorado and elsewhere.

  17. Detecting spatial patterns with the cumulant function – Part 1: The theory

    Directory of Open Access Journals (Sweden)

    P. Naveau

    2008-02-01

    Full Text Available In climate studies, detecting spatial patterns that largely deviate from the sample mean still remains a statistical challenge. Although a Principal Component Analysis (PCA, or equivalently a Empirical Orthogonal Functions (EOF decomposition, is often applied for this purpose, it provides meaningful results only if the underlying multivariate distribution is Gaussian. Indeed, PCA is based on optimizing second order moments, and the covariance matrix captures the full dependence structure of multivariate Gaussian vectors. Whenever the application at hand can not satisfy this normality hypothesis (e.g. precipitation data, alternatives and/or improvements to PCA have to be developed and studied. To go beyond this second order statistics constraint, that limits the applicability of the PCA, we take advantage of the cumulant function that can produce higher order moments information. The cumulant function, well-known in the statistical literature, allows us to propose a new, simple and fast procedure to identify spatial patterns for non-Gaussian data. Our algorithm consists in maximizing the cumulant function. Three families of multivariate random vectors, for which explicit computations are obtained, are implemented to illustrate our approach. In addition, we show that our algorithm corresponds to selecting the directions along which projected data display the largest spread over the marginal probability density tails.

  18. Variability in modeled cloud feedback tied to differences in the climatological spatial pattern of clouds

    Science.gov (United States)

    Siler, Nicholas; Po-Chedley, Stephen; Bretherton, Christopher S.

    2018-02-01

    Despite the increasing sophistication of climate models, the amount of surface warming expected from a doubling of atmospheric CO_2 (equilibrium climate sensitivity) remains stubbornly uncertain, in part because of differences in how models simulate the change in global albedo due to clouds (the shortwave cloud feedback). Here, model differences in the shortwave cloud feedback are found to be closely related to the spatial pattern of the cloud contribution to albedo (α) in simulations of the current climate: high-feedback models exhibit lower (higher) α in regions of warm (cool) sea-surface temperatures, and therefore predict a larger reduction in global-mean α as temperatures rise and warm regions expand. The spatial pattern of α is found to be strongly predictive (r=0.84) of a model's global cloud feedback, with satellite observations indicating a most-likely value of 0.58± 0.31 Wm^{-2} K^{-1} (90% confidence). This estimate is higher than the model-average cloud feedback of 0.43 Wm^{-2} K^{-1}, with half the range of uncertainty. The observational constraint on climate sensitivity is weaker but still significant, suggesting a likely value of 3.68 ± 1.30 K (90% confidence), which also favors the upper range of model estimates. These results suggest that uncertainty in model estimates of the global cloud feedback may be substantially reduced by ensuring a realistic distribution of clouds between regions of warm and cool SSTs in simulations of the current climate.

  19. Examining Spatiotemporal Urbanization Patterns in Kathmandu Valley, Nepal: Remote Sensing and Spatial Metrics Approaches

    Directory of Open Access Journals (Sweden)

    Rajesh Bahadur Thapa

    2009-09-01

    Full Text Available This paper examines the spatiotemporal pattern of urbanization in Kathmandu Valley using remote sensing and spatial metrics techniques. The study is based on 33-years of time series data compiled from satellite images. Along with new developments within the city fringes and rural villages in the valley, shifts in the natural environment and newly developed socioeconomic strains between residents are emerging. A highly dynamic spatial pattern of urbanization is observed in the valley. Urban built-up areas had a slow trend of growth in the 1960s and 1970s but have grown rapidly since the 1980s. The urbanization process has developed fragmented and heterogeneous land use combinations in the valley. However, the refill type of development process in the city core and immediate fringe areas has shown a decreasing trend in the neighborhood distances between land use patches, and an increasing trend towards physical connectedness, which indicates a higher probability of homogenous landscape development in the upcoming decades.

  20. Spatial patterning and persistence of meltwater on ice shelves and the implications for ice shelf collapse

    Science.gov (United States)

    Robel, A.; MacAyeal, D. R.; Tsai, V. C.; Shean, D. E.

    2017-12-01

    Observations indicate that for at least the last few decades, there has been extensive surface melting over ice shelves in Antarctica. Meltwater either collects in ponds or flows over the surface in streams that discharge to the ocean. The spatial organization and persistence of this meltwater can have a significant influence on the thermomechanical ice shelf state through albedo, turbulent heat exchange, refreezing and hydrofracture. However, as more meltwater forms on Antarctic ice shelves, there is no general theory that predicts the spatial pattern of meltwater ponded on the ice shelf surface and the volume of meltwater runoff to the ocean. Here, we show how dynamical systems tools, such as cellular automata, can be used to calculate the expected distribution of meltwater on ice shelf surfaces. These tools can also be used to explore how ice shelf surface morphology is modified by meltwater albedo and turbulent heating feedbacks. We apply these numerical approaches to new high-resolution digital elevation models for ice shelves in West Antarctica. Additionally, we survey the prospects of developing general rules of meltwater patterning by applying scaling approaches from percolation theory. We conclude by discussing the types of ice shelves that are more likely to cause ice shelf collapse through surface melt-induced hydrofracture or thermomechanical weakening.

  1. Spatial Patterns of Heat-Related Cardiovascular Mortality in the Czech Republic

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    Aleš Urban

    2016-03-01

    Full Text Available The study examines spatial patterns of effects of high temperature extremes on cardiovascular mortality in the Czech Republic at a district level during 1994–2009. Daily baseline mortality for each district was determined using a single location-stratified generalized additive model. Mean relative deviations of mortality from the baseline were calculated on days exceeding the 90th percentile of mean daily temperature in summer, and they were correlated with selected demographic, socioeconomic, and physical-environmental variables for the districts. Groups of districts with similar characteristics were identified according to socioeconomic status and urbanization level in order to provide a more general picture than possible on the district level. We evaluated lagged patterns of excess mortality after hot spell occurrences in: (i urban areas vs. predominantly rural areas; and (ii regions with different overall socioeconomic level. Our findings suggest that climatic conditions, altitude, and urbanization generally affect the spatial distribution of districts with the highest excess cardiovascular mortality, while socioeconomic status did not show a significant effect in the analysis across the Czech Republic as a whole. Only within deprived populations, socioeconomic status played a relevant role as well. After taking into account lagged effects of temperature on excess mortality, we found that the effect of hot spells was significant in highly urbanized regions, while most excess deaths in rural districts may be attributed to harvesting effects.

  2. Understanding the spatial and temporal patterns of copper in-use stocks in China.

    Science.gov (United States)

    Zhang, Ling; Yang, Jiameng; Cai, Zhijian; Yuan, Zengwei

    2015-06-02

    Two approaches are adopted to characterize the comprehensive pattern of the copper in-use stocks in China. The top-down results indicate that both the total amount and the per capita quantity of the stocks have exhibited a significant and increasing trend for the past 60 years, especially since 2000. The top-down results show that the copper stocks increased from a negligible level of less than 1 kg/capita in 1952 to 44 kg/capita in 2012. The total stocks in 2012 are estimated to be 60 Mt by a top-down approach or 48 Mt by a bottom-up calculation. The bottom-up method determines that the largest reservoir is the infrastructure sector, which accounts for approximately 58% of the total stocks. The spatial pattern indicates that the copper in-use stocks are predominately spatially distributed in the eastern regions of China, a feature that is obviously different from the geographical distribution of the primary resources. Analysis on the prospects of stocks shows both the total magnitude and per capita value will continuously increase in the following decade, and enter a relatively stable stage in around 2030, with a maximum value of 106 kg/capita. The results improve the knowledge about closing copper cycles.

  3. Spatial Patterns of Heat-Related Cardiovascular Mortality in the Czech Republic

    Science.gov (United States)

    Urban, Aleš; Burkart, Katrin; Kyselý, Jan; Schuster, Christian; Plavcová, Eva; Hanzlíková, Hana; Štěpánek, Petr; Lakes, Tobia

    2016-01-01

    The study examines spatial patterns of effects of high temperature extremes on cardiovascular mortality in the Czech Republic at a district level during 1994–2009. Daily baseline mortality for each district was determined using a single location-stratified generalized additive model. Mean relative deviations of mortality from the baseline were calculated on days exceeding the 90th percentile of mean daily temperature in summer, and they were correlated with selected demographic, socioeconomic, and physical-environmental variables for the districts. Groups of districts with similar characteristics were identified according to socioeconomic status and urbanization level in order to provide a more general picture than possible on the district level. We evaluated lagged patterns of excess mortality after hot spell occurrences in: (i) urban areas vs. predominantly rural areas; and (ii) regions with different overall socioeconomic level. Our findings suggest that climatic conditions, altitude, and urbanization generally affect the spatial distribution of districts with the highest excess cardiovascular mortality, while socioeconomic status did not show a significant effect in the analysis across the Czech Republic as a whole. Only within deprived populations, socioeconomic status played a relevant role as well. After taking into account lagged effects of temperature on excess mortality, we found that the effect of hot spells was significant in highly urbanized regions, while most excess deaths in rural districts may be attributed to harvesting effects. PMID:26959044

  4. Direct Visualization of Spatial and Temporal Patterns of Antimicrobial Action within Model Oral Biofilms▿

    Science.gov (United States)

    Takenaka, Shoji; Trivedi, Harsh M.; Corbin, Audrey; Pitts, Betsey; Stewart, Philip S.

    2008-01-01

    A microscopic method for noninvasively visualizing the action of an antimicrobial agent inside a biofilm was developed and applied to describe spatial and temporal patterns of mouthrinse activity on model oral biofilms. Three species biofilms of Streptococcus oralis, Streptococcus gordonii, and Actinomyces naeslundii were grown in glass capillary flow cells. Bacterial cells were stained with the fluorogenic esterase substrate Calcien AM (CAM). Loss of green fluorescence upon exposure to an antimicrobial formulation was subsequently imaged by time-lapse confocal laser scanning microscopy. When an antimicrobial mouthrinse containing chlorhexidine digluconate was administered, a gradual loss of green fluorescence was observed that began at the periphery of cell clusters where they adjoined the flowing bulk fluid and progressed inward over a time period of several minutes. Image analysis was performed to quantify a penetration velocity of 4 μm/min. An enzyme-based antimicrobial formulation led to a gradual, continually slowing loss of fluorescence in a pattern that was qualitatively different from the behavior observed with chlorhexidine. Ethanol at 11.6% had little effect on the biofilm. None of these treatments resulted in the removal of biomass from the biofilm. Most methods to measure or visualize antimicrobial action in biofilms are destructive. Spatial information is important because biofilms are known for their structural and physiological heterogeneity. The CAM staining technique has the potential to provide information about the rate of antimicrobial penetration, the presence of tolerant subpopulations, and the extent of biomass removal effected by a treatment. PMID:18223108

  5. Spatial patterns of water quality in Xingu River Basin (Amazonia prior to the Belo Monte dam impoundment

    Directory of Open Access Journals (Sweden)

    JL. Rodrigues-Filho

    Full Text Available Abstract The Xingu River, one of the most important of the Amazon Basin, is characterized by clear and transparent waters that drain a 509.685 km2 watershed with distinct hydrological and ecological conditions and anthropogenic pressures along its course. As in other basins of the Amazon system, studies in the Xingu are scarce. Furthermore, the eminent construction of the Belo Monte for hydropower production, which will alter the environmental conditions in the basin in its lower middle portion, denotes high importance of studies that generate relevant information that may subsidize a more balanced and equitable development in the Amazon region. Thus, the aim of this study was to analyze the water quality in the Xingu River and its tributaries focusing on spatial patterns by the use of multivariate statistical techniques, identifying which water quality parameters were more important for the environmental changes in the watershed. Data sampling were carried out during two complete hydrological cycles in twenty-five sampling stations. The data of twenty seven variables were analyzed by Spearman's correlation coefficients, cluster analysis (CA, and principal component analysis (PCA. The results showed a high auto-correlation between variables (> 0.7. These variables were removed from multivariate analyzes because they provided redundant information about the environment. The CA resulted in the formation of six clusters, which were clearly observed in the PCA and were characterized by different water quality. The statistical results allowed to identify a high spatial variation in the water quality, which were related to specific features of the environment, different uses, influences of anthropogenic activities and geochemical characteristics of the drained basins. It was also demonstrated that most of the sampling stations in the Xingu River basin showed good water quality, due to the absence of local impacts and high power of depuration of the

  6. Modelling spatial patterns of wildfire occurrence in South-Eastern Australia

    Directory of Open Access Journals (Sweden)

    Yang Zhang

    2016-11-01

    Full Text Available This paper describes the development and validation of spatial models for wildfire occurrence at a broad landscape scale. The hotspots databases from the Moderate Resolution Imaging Spectroradiometer (MODIS and logistic regression models are investigated for the comprehensive understanding of environmental and socioeconomic determinants regulating the spatial distribution of wildfires over the 11-year period 2003–2013. The probability of occurrence of at least one fire on a 1 km2 grid cell in a 1,030,000 km2 region located in South-Eastern Australia is studied for the prediction of future fire occurrence. Our research shows that wildfires are most likely to occur in mountainous areas, forests, savannas and lands with high vegetation coverage, and are less likely to occur on grasslands and shrublands. Wildfires also tend to occur in areas near human infrastructures. Environmental variables are strong individual predictors of fire occurrence while socioeconomic variables contribute more to the final model. The influence of environmental and socioeconomic conditions on wildfire occurrence and the spatial patterns of wildfires identified in this study can assist fire managers in implementing appropriate management actions in South-Eastern Australia. This paper also demonstrates the potential of applying the MODIS active fire product in wildfire occurrence studies.

  7. Summer spatial patterning of chukars in relation to free water in Western Utah

    Science.gov (United States)

    Larsen, R.T.; Bissonette, J.A.; Flinders, J.T.; Hooten, M.B.; Wilson, T.L.

    2010-01-01

    Free water is considered important to wildlife in arid regions. In the western United States, thousands of water developments have been built to benefit wildlife in arid landscapes. Agencies and researchers have yet to clearly demonstrate their effectiveness. We combined a spatial analysis of summer chukar (Alectoris chukar) covey locations with dietary composition analysis in western Utah. Our specific objectives were to determine if chukars showed a spatial pattern that suggested association with free water in four study areas and to document summer dietary moisture content in relation to average distance from water. The observed data for the Cedar Mountains study area fell within the middle of the random mean distance to water distribution suggesting no association with free water. The observed mean distance to water for the other three areas was much closer than expected compared to a random spatial process, suggesting the importance of free water to these populations. Dietary moisture content of chukar food items from the Cedar Mountains (59%) was significantly greater (P future ecological research. ?? Springer Science+Business Media B.V. 2009.

  8. Summer spatial patterning of chukars in relation to free water in Western Utah

    Science.gov (United States)

    Larsen, R.T.; Bissonette, J.A.; Flinders, J.T.; Hooten, M.B.; Wilson, T.L.

    2010-01-01

    Free water is considered important to wildlife in arid regions. In the western United States, thousands of water developments have been built to benefit wildlife in arid landscapes. Agencies and researchers have yet to clearly demonstrate their effectiveness. We combined a spatial analysis of summer chukar (Alectoris chukar) covey locations with dietary composition analysis in western Utah. Our specific objectives were to determine if chukars showed a spatial pattern that suggested association with free water in four study areas and to document summer dietary moisture content in relation to average distance from water. The observed data for the Cedar Mountains study area fell within the middle of the random mean distance to water distribution suggesting no association with free water. The observed mean distance to water for the other three areas was much closer than expected compared to a random spatial process, suggesting the importance of free water to these populations. Dietary moisture content of chukar food items from the Cedar Mountains (59%) was significantly greater (P Business Media B.V. 2009.

  9. Simultaneous design of FIR filter banks and spatial patterns for EEG signal classification.

    Science.gov (United States)

    Higashi, Hiroshi; Tanaka, Toshihisa

    2013-04-01

    The spatial weights for electrodes called common spatial pattern (CSP) are known to be effective in EEG signal classification for motor imagery-based brain-computer interface (MI-BCI). To achieve accurate classification in CSP, it is necessary to find frequency bands that relate to brain activities associated with BCI tasks. Several methods that determine such a set of frequency bands have been proposed. However, the existing methods cannot find the multiple frequency bands by using only learning data. To address this problem, we propose discriminative filter bank CSP (DFBCSP) that designs finite impulse response filters and the associated spatial weights by optimizing an objective function which is a natural extension of that of CSP. The optimization is conducted by sequentially and alternatively solving subproblems into which the original problem is divided. By experiments, it is shown that DFBCSP can effectively extract discriminative features for MI-BCI. Moreover, experimental results exhibit that DFBCSP can detect and extract the bands related to brain activities of motor imagery.

  10. Quantifying spatial habitat loss from hydrocarbon development through assessing habitat selection patterns of mule deer.

    Science.gov (United States)

    Northrup, Joseph M; Anderson, Charles R; Wittemyer, George

    2015-11-01

    Extraction of oil and natural gas (hydrocarbons) from shale is increasing rapidly in North America, with documented impacts to native species and ecosystems. With shale oil and gas resources on nearly every continent, this development is set to become a major driver of global land-use change. It is increasingly critical to quantify spatial habitat loss driven by this development to implement effective mitigation strategies and develop habitat offsets. Habitat selection is a fundamental ecological process, influencing both individual fitness and population-level distribution on the landscape. Examinations of habitat selection provide a natural means for understanding spatial impacts. We examined the impact of natural gas development on habitat selection patterns of mule deer on their winter range in Colorado. We fit resource selection functions in a Bayesian hierarchical framework, with habitat availability defined using a movement-based modeling approach. Energy development drove considerable alterations to deer habitat selection patterns, with the most substantial impacts manifested as avoidance of well pads with active drilling to a distance of at least 800 m. Deer displayed more nuanced responses to other infrastructure, avoiding pads with active production and roads to a greater degree during the day than night. In aggregate, these responses equate to alteration of behavior by human development in over 50% of the critical winter range in our study area during the day and over 25% at night. Compared to other regions, the topographic and vegetative diversity in the study area appear to provide refugia that allow deer to behaviorally mediate some of the impacts of development. This study, and the methods we employed, provides a template for quantifying spatial take by industrial activities in natural areas and the results offer guidance for policy makers, mangers, and industry when attempting to mitigate habitat loss due to energy development. © 2015 The Authors

  11. Vegetation Carbon Storage, Spatial Patterns and Response to Altitude in Lancang River Basin, Southwest China

    Directory of Open Access Journals (Sweden)

    Long Chen

    2016-01-01

    Full Text Available Vegetation plays a very important role of carbon (C sinks in the global C cycle. With its complex terrain and diverse vegetation types, the Lancang River Basin (LRB of southwest China has huge C storage capacity. Therefore, understanding the spatial variations and controlling mechanisms of vegetation C storage is important to understand the regional C cycle. In this study, data from a forest inventory and field plots were used to estimate and map vegetation C storage distribution in the LRB, to qualify the quantitative relationships between vegetation C density and altitude at sublot and township scale, and a linear model or polynomial model was used to identify the relationship between C density and altitude at two spatial scales and two statistical scales. The results showed that a total of 300.32 Tg C was stored in the LRB, an important C sink in China. The majority of C storage was contributed by forests, notably oaks. The vegetation C storage exhibited nonlinear variation with latitudinal gradients. Altitude had tremendous influences on spatial patterns of vegetation C storage of three geomorphological types in the LRB. C storage decreased with increasing altitude at both town and sublot scales in the flat river valley (FRV region and the mid-low mountains gorge (MMG region, and first increased then decreased in the alpine gorge (AG region. This revealed that, in southwest China, altitude changes the latitudinal patterns of vegetation C storage; especially in the AG area, C density in the mid-altitude (3100 m area was higher than that of adjacent areas.

  12. Potential for tree rings to reveal spatial patterns of past drought variability across western Australia

    Science.gov (United States)

    O'Donnell, Alison J.; Cook, Edward R.; Palmer, Jonathan G.; Turney, Chris S. M.; Grierson, Pauline F.

    2018-02-01

    Proxy records have provided major insights into the variability of past climates over long timescales. However, for much of the Southern Hemisphere, the ability to identify spatial patterns of past climatic variability is constrained by the sparse distribution of proxy records. This is particularly true for mainland Australia, where relatively few proxy records are located. Here, we (1) assess the potential to use existing proxy records in the Australasian region—starting with the only two multi-century tree-ring proxies from mainland Australia—to reveal spatial patterns of past hydroclimatic variability across the western third of the continent, and (2) identify strategic locations to target for the development of new proxy records. We show that the two existing tree-ring records allow robust reconstructions of past hydroclimatic variability over spatially broad areas (i.e. > 3° × 3°) in inland north- and south-western Australia. Our results reveal synchronous periods of drought and wet conditions between the inland northern and southern regions of western Australia as well as a generally anti-phase relationship with hydroclimate in eastern Australia over the last two centuries. The inclusion of 174 tree-ring proxy records from Tasmania, New Zealand and Indonesia and a coral record from Queensland did not improve the reconstruction potential over western Australia. However, our findings suggest that the addition of relatively few new proxy records from key locations in western Australia that currently have low reconstruction skill will enable the development of a comprehensive drought atlas for the region, and provide a critical link to the drought atlases of monsoonal Asia and eastern Australia and New Zealand.

  13. Decreased use of spatial pattern separation in contemporary lifestyles may contribute to hippocampal atrophy and diminish mental health.

    Science.gov (United States)

    Birkel, Lindy

    2017-09-01

    The spatial pattern separation process has not yet been proposed as a pivotal neural activity affecting hippocampal volume, a metric of mental health. The dentate gyrus/CA3 region is increasingly implicated in hippocampal atrophy, its putative role in spatial pattern separation appears to be impaired in mental health disorders, and performance on a task indicative of pattern separation correlates with dentate gyrus/CA3 volume. Spatial pattern separation is thought to utilize the heightened neural plasticity of newborn neurons in the dentate gyrus to distinguish highly similar aspects of scene so that these remain distinct in memory rather than lost. The level of such activity associates with BDNF secretion, which may affect neuroplasticity and therefore hippocampal volume. Distinguishing fine-grained aspects of surroundings was likely of great importance during hunting and gathering for survival in nature. However the need to make subtle environmental discriminations is much reduced in modern survival activity. Ancestrally, exploration and utilization of the spatial pattern separation process may have resulted in detection of potential food items, an activity that was likely followed by intensive effort-based reward (EBR) activity to obtain the food. EBR activity and restorative walking in nature demonstrate positive mental health benefits, while their lack indicates negative effects on mental health. Data support the hypothesis that spatial pattern separation activity and neural circuitry are separate from, and may precede, those of EBR as well as restorative walking in nature. Spatial pattern separation therefore represents an additional nature-related neural process whose modern decrease in use may negatively affect mental health. Interventions that increase spatial pattern separation experiences may enhance BDNF secretion, neuroplasticity, hippocampal volume and mental health. Copyright © 2017 Elsevier Ltd. All rights reserved.

  14. A spatial-frequency-temporal optimized feature sparse representation-based classification method for motor imagery EEG pattern recognition.

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    Miao, Minmin; Wang, Aimin; Liu, Feixiang

    2017-09-01

    Effective feature extraction and classification methods are of great importance for motor imagery (MI)-based brain-computer interface (BCI) systems. The common spatial pattern (CSP) algorithm is a widely used feature extraction method for MI-based BCIs. In this work, we propose a novel spatial-frequency-temporal optimized feature sparse representation-based classification method. Optimal channels are selected based on relative entropy criteria. Significant CSP features on frequency-temporal domains are selected automatically to generate a column vector for sparse representation-based classification (SRC). We analyzed the performance of the new method on two public EEG datasets, namely BCI competition III dataset IVa which has five subjects and BCI competition IV dataset IIb which has nine subjects. Compared to the performance offered by the existing SRC method, the proposed method achieves average classification accuracy improvements of 21.568 and 14.38% for BCI competition III dataset IVa and BCI competition IV dataset IIb, respectively. Furthermore, our approach also shows better classification performance when compared to other competing methods for both datasets.

  15. Using a Cellular Automata-Markov Model to Reconstruct Spatial Land-Use Patterns in Zhenlai County, Northeast China

    Directory of Open Access Journals (Sweden)

    Yuanyuan Yang

    2015-05-01

    Full Text Available Decadal to centennial land use and land cover change has been consistently singled out as a key element and an important driver of global environmental change, playing an essential role in balancing energy use. Understanding long-term human-environment interactions requires historical reconstruction of past land use and land cover changes. Most of the existing historical reconstructions have insufficient spatial and thematic detail and do not consider various land change types. In this context, this paper explored the possibility of using a cellular automata-Markov model in 90 m × 90 m spatial resolution to reconstruct historical land use in the 1930s in Zhenlai County, China. Then the three-map comparison methodology was employed to assess the predictive accuracy of the transition modeling. The model could produce backward projections by analyzing land use changes in recent decades, assuming that the present land use pattern is dynamically dependent on the historical one. The reconstruction results indicated that in the 1930s most of the study area was occupied by grasslands, followed by wetlands and arable land, while other land categories occupied relatively small areas. Analysis of the three-map comparison illustrated that the major differences among the three maps have less to do with the simulation model and more to do with the inconsistencies among the land categories during the study period. Different information provided by topographic maps and remote sensing images must be recognized.

  16. Multifractal detrended fluctuation analysis in examining scaling properties of the spatial patterns of soil water storage

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    A. Biswas

    2012-03-01

    Full Text Available Knowledge about the scaling properties of soil water storage is crucial in transferring locally measured fluctuations to larger scales and vice-versa. Studies based on remotely sensed data have shown that the variability in surface soil water has clear scaling properties (i.e., statistically self similar over a wider range of spatial scales. However, the scaling property of soil water storage to a certain depth at a field scale is not well understood. The major challenges in scaling analysis for soil water are the presence of localized trends and nonstationarities in the spatial series. The objective of this study was to characterize scaling properties of soil water storage variability through multifractal detrended fluctuation analysis (MFDFA. A field experiment was conducted in a sub-humid climate at Alvena, Saskatchewan, Canada. A north-south transect of 624-m long was established on a rolling landscape. Soil water storage was monitored weekly between 2002 and 2005 at 104 locations along the transect. The spatial scaling property of the surface 0 to 40 cm depth was characterized using the MFDFA technique for six of the soil water content series (all gravimetrically determined representing soil water storage after snowmelt, rainfall, and evapotranspiration. For the studied transect, scaling properties of soil water storage are different between drier periods and wet periods. It also appears that local controls such as site topography and texture (that dominantly control the pattern during wet states results in multiscaling property. The nonlocal controls such as evapotranspiration results in the reduction of the degree of multiscaling and improvement in the simple scaling. Therefore, the scaling property of soil water storage is a function of both soil moisture status and the spatial extent considered.

  17. Detecting Spatial Patterns of Natural Hazards from the Wikipedia Knowledge Base

    Science.gov (United States)

    Fan, J.; Stewart, K.

    2015-07-01

    The Wikipedia database is a data source of immense richness and variety. Included in this database are thousands of geotagged articles, including, for example, almost real-time updates on current and historic natural hazards. This includes usercontributed information about the location of natural hazards, the extent of the disasters, and many details relating to response, impact, and recovery. In this research, a computational framework is proposed to detect spatial patterns of natural hazards from the Wikipedia database by combining topic modeling methods with spatial analysis techniques. The computation is performed on the Neon Cluster, a high performance-computing cluster at the University of Iowa. This work uses wildfires as the exemplar hazard, but this framework is easily generalizable to other types of hazards, such as hurricanes or flooding. Latent Dirichlet Allocation (LDA) modeling is first employed to train the entire English Wikipedia dump, transforming the database dump into a 500-dimension topic model. Over 230,000 geo-tagged articles are then extracted from the Wikipedia database, spatially covering the contiguous United States. The geo-tagged articles are converted into an LDA topic space based on the topic model, with each article being represented as a weighted multidimension topic vector. By treating each article's topic vector as an observed point in geographic space, a probability surface is calculated for each of the topics. In this work, Wikipedia articles about wildfires are extracted from the Wikipedia database, forming a wildfire corpus and creating a basis for the topic vector analysis. The spatial distribution of wildfire outbreaks in the US is estimated by calculating the weighted sum of the topic probability surfaces using a map algebra approach, and mapped using GIS. To provide an evaluation of the approach, the estimation is compared to wildfire hazard potential maps created by the USDA Forest service.

  18. Impaired spatial pattern separation performance in temporal lobe epilepsy is associated with visuospatial memory deficits and hippocampal volume loss.

    Science.gov (United States)

    Reyes, Anny; Holden, Heather M; Chang, Yu-Hsuan A; Uttarwar, Vedang S; Sheppard, David P; DeFord, Nicole E; DeJesus, Shannon Yandall; Kansal, Leena; Gilbert, Paul E; McDonald, Carrie R

    2018-03-01

    Individuals with chronic temporal lobe epilepsy (TLE) experience episodic memory deficits that may be progressive in nature. These memory decrements have been shown to increase with the extent of hippocampal damage, a hallmark feature of TLE. Pattern separation, a neural computational mechanism thought to play a role in episodic memory formation, has been shown to be negatively affected by aging and in individuals with known hippocampal dysfunction. Despite the link between poor pattern separation performance and episodic memory deficits, behavioral pattern separation has not been examined in patients with TLE. We examined pattern separation performance in a group of 22 patients with medically-refractory TLE and 20 healthy adults, using a task hypothesized to measure spatial pattern separation with graded levels of spatial interference. We found that individuals with TLE showed less efficient spatial pattern separation performance relative to healthy adults. Poorer spatial pattern separation performance in TLE was associated with poorer visuospatial memory, but only under high interference conditions. In addition, left hippocampal atrophy was associated with poor performance in the high interference condition in TLE. These data suggest that episodic memory impairments in patients with chronic, refractory TLE may be partially due to less efficient pattern separation, which likely reflects their underlying hippocampal dysfunction. Copyright © 2018 Elsevier Ltd. All rights reserved.

  19. Spatial and Temporal Microbial Patterns in a Tropical Macrotidal Estuary Subject to Urbanization

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    Mirjam Kaestli

    2017-07-01

    Full Text Available Darwin Harbour in northern Australia is an estuary in the wet-dry tropics subject to increasing urbanization with localized water quality degradation due to increased nutrient loads from urban runoff and treated sewage effluent. Tropical estuaries are poorly studied compared to temperate systems and little is known about the microbial community-level response to nutrients. We aimed to examine the spatial and temporal patterns of the bacterial community and its association with abiotic factors. Since Darwin Harbour is macrotidal with strong seasonal patterns and mixing, we sought to determine if a human impact signal was discernible in the microbiota despite the strong hydrodynamic forces. Adopting a single impact–double reference design, we investigated the bacterial community using next-generation sequencing of the 16S rRNA gene from water and sediment from reference creeks and creeks affected by effluent and urban runoff. Samples were collected over two years during neap and spring tides, in the dry and wet seasons. Temporal drivers, namely seasons and tides had the strongest relationship to the water microbiota, reflecting the macrotidal nature of the estuary and its location in the wet-dry tropics. The neap-tide water microbiota provided the clearest spatial resolution while the sediment microbiota reflected current and past water conditions. Differences in patterns of the microbiota between different parts of the harbor reflected the harbor's complex hydrodynamics and bathymetry. Despite these variations, a microbial signature was discernible relating to specific effluent sources and urban runoff, and the composite of nutrient levels accounted for the major part of the explained variation in the microbiota followed by salinity. Our results confirm an overall good water quality but they also reflect the extent of some hypereutrophic areas. Our results show that the microbiota is a sensitive indicator to assess ecosystem health even in this

  20. Evidence of Territoriality and Species Interactions from Spatial Point-Pattern Analyses of Subarctic-Nesting Geese

    Science.gov (United States)

    Reiter, Matthew E.; Andersen, David E.

    2013-01-01

    Quantifying spatial patterns of bird nests and nest fate provides insights into processes influencing a species’ distribution. At Cape Churchill, Manitoba, Canada, recent declines in breeding Eastern Prairie Population Canada geese (Branta canadensis interior) has coincided with increasing populations of nesting lesser snow geese (Chen caerulescens caerulescens) and Ross’s geese (Chen rossii). We conducted a spatial analysis of point patterns using Canada goose nest locations and nest fate, and lesser snow goose nest locations at two study areas in northern Manitoba with different densities and temporal durations of sympatric nesting Canada and lesser snow geese. Specifically, we assessed (1) whether Canada geese exhibited territoriality and at what scale and nest density; and (2) whether spatial patterns of Canada goose nest fate were associated with the density of nesting lesser snow geese as predicted by the protective-association hypothesis. Between 2001 and 2007, our data suggest that Canada geese were territorial at the scale of nearest neighbors, but were aggregated when considering overall density of conspecifics at slightly broader spatial scales. The spatial distribution of nest fates indicated that lesser snow goose nest proximity and density likely influence Canada goose nest fate. Our analyses of spatial point patterns suggested that continued changes in the distribution and abundance of breeding lesser snow geese on the Hudson Bay Lowlands may have impacts on the reproductive performance of Canada geese, and subsequently the spatial distribution of Canada goose nests. PMID:24312520

  1. PRIMEGENS-v2: genome-wide primer design for analyzing DNA methylation patterns of CpG islands.

    Science.gov (United States)

    Srivastava, Gyan P; Guo, Juyuan; Shi, Huidong; Xu, Dong

    2008-09-01

    DNA methylation plays important roles in biological processes and human diseases, especially cancers. High-throughput bisulfite genomic sequencing based on new generation of sequencers, such as the 454-sequencing system provides an efficient method for analyzing DNA methylation patterns. The successful implementation of this approach depends on the use of primer design software capable of performing genome-wide scan for optimal primers from in silico bisulfite-treated genome sequences. We have developed a method, which fulfills this requirement and conduct primer design for sequences including regions of given promoter CpG islands. The developed method has been implemented using the C and JAVA programming languages. The primer design results were tested in the PCR experiments of 96 selected human DNA sequences containing CpG islands in the promoter regions. The results indicate that this method is efficient and reliable for designing sequence-specific primers. The sequence-specific primer design for DNA meth-ylated sequences including CpG islands has been integrated into the second version of PRIMEGENS as one of the primer design features. The software is freely available for academic use at http://digbio.missouri.edu/primegens/.

  2. Large-area imaging reveals biologically driven non-random spatial patterns of corals at a remote reef

    Science.gov (United States)

    Edwards, Clinton B.; Eynaud, Yoan; Williams, Gareth J.; Pedersen, Nicole E.; Zgliczynski, Brian J.; Gleason, Arthur C. R.; Smith, Jennifer E.; Sandin, Stuart A.

    2017-12-01

    For sessile organisms such as reef-building corals, differences in the degree of dispersion of individuals across a landscape may result from important differences in life-history strategies or may reflect patterns of habitat availability. Descriptions of spatial patterns can thus be useful not only for the identification of key biological and physical mechanisms structuring an ecosystem, but also by providing the data necessary to generate and test ecological theory. Here, we used an in situ imaging technique to create large-area photomosaics of 16 plots at Palmyra Atoll, central Pacific, each covering 100 m2 of benthic habitat. We mapped the location of 44,008 coral colonies and identified each to the lowest taxonomic level possible. Using metrics of spatial dispersion, we tested for departures from spatial randomness. We also used targeted model fitting to explore candidate processes leading to differences in spatial patterns among taxa. Most taxa were clustered and the degree of clustering varied by taxon. A small number of taxa did not significantly depart from randomness and none revealed evidence of spatial uniformity. Importantly, taxa that readily fragment or tolerate stress through partial mortality were more clustered. With little exception, clustering patterns were consistent with models of fragmentation and dispersal limitation. In some taxa, dispersion was linearly related to abundance, suggesting density dependence of spatial patterning. The spatial patterns of stony corals are non-random and reflect fundamental life-history characteristics of the taxa, suggesting that the reef landscape may, in many cases, have important elements of spatial predictability.

  3. Analyses and simulation to spatial pattern of land utilization in Guangzhu City

    Science.gov (United States)

    Zhang, Xin-chang; Zhang, Wen-jiang; Ma, Kun

    2006-10-01

    Based on Landsat TM remote sensing images in 1990 and 2000, we analyses the temporal and spatial pattern Characters of land use in the 1990s in Guangzhou city. We also simulate the scenarios of land-use pattern in 2010 by integrating the Markov process into cellular automata model. The results show that the area of constructions was rapid increasing during the last ten years of the 20th century, at the same time the arable land, woodland and unused land areas were decreasing, the orchard and water areas were rarely changed; In the first ten years of 21st century, land use pattern keep the change trend in the 1990s, land of constructions continue rapid increasing; arable land and unused land areas continue rapid decreasing; woodland, orchard and water areas keep steadily. Research shows that the extent of urban area has increased exponentially in Guangzhou city, no evidences show that the arable land decreasing rate will slow down in the near future. So, it is necessary to enhance the control functions of land use planning and take actives measures to protect arable land.

  4. Patterns of subgrouping and spatial affiliation in a community of mantled howling monkeys (Alouatta palliata).

    Science.gov (United States)

    Bezanson, Michelle; Garber, Paul A; Murphy, John T; Premo, L S

    2008-03-01

    Studies of social affiliation and social spacing offer important insight into the dynamics of subgroup formation and social strategies in living primates. Among the 11 species in the genus Alouatta, mantled howlers (A. palliata) are the only species to consistently form large, stable social groups composed of several adult males and several adult females. In this study, we examine patterns of subgrouping, activity, and partner preferences in a troop of 26-29 wild mantled howling monkeys (including 12-13 marked individuals) inhabiting Isla de Ometepe, Nicaragua. During two study seasons in 2000 and 2001, we simultaneously monitored the size, composition, and activities of individuals in two to three different subgroups. A half-weight association index was used to calculate partner preferences and patterns of spatial association. Results indicate that our howler study troop fragmented into subgroups of 1-20 with subgroups averaging five and six individuals. Subgroup size and membership reflected individual patterns of social affiliation and social tolerance, and in general remained consistent across activities and from year to year. We also found evidence of cliques or social networks of three to four individuals embedded within larger subgroups. A small number of adult males appeared to play an important social role as the nucleus of clique formation. We argue that the persistence of strong male-male and male-female partner preferences in mantled howlers helps to explain the stability of relatively large multimale-multifemale groups.

  5. Geospatial Modeling for Investigating Spatial Pattern and Change Trend of Temperature and Rainfall

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    Md. Abu Syed

    2016-04-01

    Full Text Available Bangladesh has been experiencing increased temperature and change in precipitation regime, which might adversely affect the important ecosystems in the country differentially. The river flows and groundwater recharge over space and time are determined by changes in temperature, evaporation and crucially precipitation. These again have a spatio-temporal dimension. This geospatial modeling research aimed at investigating spatial patterns and changing trends of temperature and rainfall within the geographical boundary of Bangladesh. This would facilitate better understanding the change pattern and their probable impacts on the ecosystem. The southeastern region, which is one of the most important forest ecosystem zones in the country, is experiencing early onset and withdrawal of rain but increasing trends in total rainfall except in the Monsoon season. This means that the region is experiencing a lower number of rainy days. However, total rainfall has not changed significantly. The differential between maximum and minimum showed an increasing trend. This changing pattern in average max and min temperature along with precipitation might cause a situation in which the species that are growing now may shift to suitable habitats elsewhere in the future. Consequently, the biodiversity, watersheds and fisheries, productivity of land, agriculture and food security in the region will be affected by these observed changes in climate.

  6. Spatial Patterns of Fire Recurrence Using Remote Sensing and GIS in the Brazilian Savanna: Serra do Tombador Nature Reserve, Brazil

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    Gabriel Antunes Daldegan

    2014-10-01

    Full Text Available The Cerrado is the second largest biome in Brazil after the Amazon and is the savanna with the highest biodiversity in the world. Serra Tombador Natural Reserve (STNR is the largest private reserve located in Goiás State, and the fourth largest in the Cerrado biome. The present study aimed to map the burnt areas and to describe the spatial patterns of fire recurrence and its interactions with the classes of land-cover that occurred in STNR and its surroundings in the period between 2001 and 2010. Several Landsat TM images acquired around the months of July, August and September, coinciding with the region’s dry season when fire events intensify, were employed to monitor burnt areas. Fire scars were mapped using the supervised Mahalanobis-distance classifier and further refined using expert visual interpretation. Burnt area patterns were described by spatial landscape metrics. The effects of fire on landscape structure were obtained by comparing results among different land-cover classes, and results summarized in terms of fire history and frequencies. During the years covered by the study, 69% of the areas analyzed had fire events. The year with the largest burnt area was 2004, followed by 2001, 2007 and 2010. Thus, the largest fire events occurred in a 3-year cycle, which is compatible with other areas of the Brazilian savanna. The regions with higher annual probabilities of fire recurrence occur in the buffer zone around the park. The year 2004 also had the highest number of burnt area patches (831. In contrast, the burnt area in 2007 showed the most extensive fires with low number of patches (82. The physiognomies that suffered most fires were the native savanna formations. The study also identified areas where fires are frequently recurrent, highlighting priority areas requiring special attention. Thus, the methodology adopted in this study assists in monitoring and recovery of areas affected by fire over time.

  7. Physically-based modeling of topographic effects on spatial evapotranspiration and soil moisture patterns through radiation and wind

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    M. Liu

    2012-02-01

    Full Text Available In this paper, simulations with the Soil Water Atmosphere Plant (SWAP model are performed to quantify the spatial variability of both potential and actual evapotranspiration (ET, and soil moisture content (SMC caused by topography-induced spatial wind and radiation differences. To obtain the spatially distributed ET/SMC patterns, the field scale SWAP model is applied in a distributed way for both pointwise and catchment wide simulations. An adapted radiation model from r.sun and the physically-based meso-scale wind model METRAS PC are applied to obtain the spatial radiation and wind patterns respectively, which show significant spatial variation and correlation with aspect and elevation respectively. Such topographic dependences and spatial variations further propagate to ET/SMC. A strong spatial, seasonal-dependent, scale-relevant intra-catchment variability in daily/annual ET and less variability in SMC can be observed from the numerical experiments. The study concludes that topography has a significant effect on ET/SMC in the humid region where ET is a energy limited rather than water availability limited process. It affects the spatial runoff generation through spatial radiation and wind, therefore should be applied to inform hydrological model development. In addition, the methodology used in the study can serve as a general method for physically-based ET estimation for data sparse regions.

  8. Global patterns in human mitochondrial DNA and Y-chromosome variation caused by spatial instability of the local cultural processes.

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    Vikrant Kumar

    2006-04-01

    Full Text Available Because of the widespread phenomenon of patrilocality, it is hypothesized that Y-chromosome variants tend to be more localized geographically than those of mitochondrial DNA (mtDNA. Empirical evidence confirmatory to this hypothesis was subsequently provided among certain patrilocal and matrilocal groups of Thailand, which conforms to the isolation by distance mode of gene diffusion. However, we expect intuitively that the patterns of genetic variability may not be consistent with the above hypothesis among populations with different social norms governing the institution of marriage, particularly among those that adhere to strict endogamy rules. We test the universality of this hypothesis by analyzing Y-chromosome and mtDNA data in three different sets of Indian populations that follow endogamy rules to varying degrees. Our analysis of the Indian patrilocal and the matrilocal groups is not confirmatory to the sex-specific variation observed among the tribes of Thailand. Our results indicate spatial instability of the impact of different cultural processes on the genetic variability, resulting in the lack of universality of the hypothesized pattern of greater Y-chromosome variation when compared to that of mtDNA among the patrilocal populations.

  9. a Three-Step Spatial-Temporal Clustering Method for Human Activity Pattern Analysis

    Science.gov (United States)

    Huang, W.; Li, S.; Xu, S.

    2016-06-01

    How people move in cities and what they do in various locations at different times form human activity patterns. Human activity pattern plays a key role in in urban planning, traffic forecasting, public health and safety, emergency response, friend recommendation, and so on. Therefore, scholars from different fields, such as social science, geography, transportation, physics and computer science, have made great efforts in modelling and analysing human activity patterns or human mobility patterns. One of the essential tasks in such studies is to find the locations or places where individuals stay to perform some kind of activities before further activity pattern analysis. In the era of Big Data, the emerging of social media along with wearable devices enables human activity data to be collected more easily and efficiently. Furthermore, the dimension of the accessible human activity data has been extended from two to three (space or space-time) to four dimensions (space, time and semantics). More specifically, not only a location and time that people stay and spend are collected, but also what people "say" for in a location at a time can be obtained. The characteristics of these datasets shed new light on the analysis of human mobility, where some of new methodologies should be accordingly developed to handle them. Traditional methods such as neural networks, statistics and clustering have been applied to study human activity patterns using geosocial media data. Among them, clustering methods have been widely used to analyse spatiotemporal patterns. However, to our best knowledge, few of clustering algorithms are specifically developed for handling the datasets that contain spatial, temporal and semantic aspects all together. In this work, we propose a three-step human activity clustering method based on space, time and semantics to fill this gap. One-year Twitter data, posted in Toronto, Canada, is used to test the clustering-based method. The results show that the

  10. A THREE-STEP SPATIAL-TEMPORAL-SEMANTIC CLUSTERING METHOD FOR HUMAN ACTIVITY PATTERN ANALYSIS

    Directory of Open Access Journals (Sweden)

    W. Huang

    2016-06-01

    Full Text Available How people move in cities and what they do in various locations at different times form human activity patterns. Human activity pattern plays a key role in in urban planning, traffic forecasting, public health and safety, emergency response, friend recommendation, and so on. Therefore, scholars from different fields, such as social science, geography, transportation, physics and computer science, have made great efforts in modelling and analysing human activity patterns or human mobility patterns. One of the essential tasks in such studies is to find the locations or places where individuals stay to perform some kind of activities before further activity pattern analysis. In the era of Big Data, the emerging of social media along with wearable devices enables human activity data to be collected more easily and efficiently. Furthermore, the dimension of the accessible human activity data has been extended from two to three (space or space-time to four dimensions (space, time and semantics. More specifically, not only a location and time that people stay and spend are collected, but also what people “say” for in a location at a time can be obtained. The characteristics of these datasets shed new light on the analysis of human mobility, where some of new methodologies should be accordingly developed to handle them. Traditional methods such as neural networks, statistics and clustering have been applied to study human activity patterns using geosocial media data. Among them, clustering methods have been widely used to analyse spatiotemporal patterns. However, to our best knowledge, few of clustering algorithms are specifically developed for handling the datasets that contain spatial, temporal and semantic aspects all together. In this work, we propose a three-step human activity clustering method based on space, time and semantics to fill this gap. One-year Twitter data, posted in Toronto, Canada, is used to test the clustering-based method. The

  11. Spatial Patterns in Herbivory on a Coral Reef Are Influenced by Structural Complexity but Not by Algal Traits

    Science.gov (United States)

    Vergés, Adriana; Vanderklift, Mathew A.; Doropoulos, Christopher; Hyndes, Glenn A.

    2011-01-01

    Background Patterns of herbivory can alter the spatial structure of ecosystems, with important consequences for ecosystem functions and biodiversity. While the factors that drive spatial patterns in herbivory in terrestrial systems are well established, comparatively less is known about what influences the distribution of herbivory in coral reefs. Methodology and Principal Findings We quantified spatial patterns of macroalgal consumption in a cross-section of Ningaloo Reef (Western Australia). We used a combination of descriptive and experimental approaches to assess the influence of multiple macroalgal traits and structural complexity in establishing the observed spatial patterns in macroalgal herbivory, and to identify potential feedback mechanisms between herbivory and macroalgal nutritional quality. Spatial patterns in macroalgal consumption were best explained by differences in structural complexity among habitats. The biomass of herbivorous fish, and rates of herbivory were always greater in the structurally-complex coral-dominated outer reef and reef flat habitats, which were also characterised by high biomass of herbivorous fish, low cover and biomass of macroalgae and the presence of unpalatable algae species. Macroalgal consumption decreased to undetectable levels within 75 m of structurally-complex reef habitat, and algae were most abundant in the structurally-simple lagoon habitats, which were also characterised by the presence of the most palatable algae species. In contrast to terrestrial ecosystems, herbivory patterns were not influenced by the distribution, productivity or nutritional quality of resources (macroalgae), and we found no evidence of a positive feedback between macroalgal consumption and the nitrogen content of algae. Significance This study highlights the importance of seascape-scale patterns in structural complexity in determining spatial patterns of macroalgal consumption by fish. Given the importance of herbivory in maintaining the

  12. Diverse miRNA spatial expression patterns suggest important roles in homeostasis and regeneration in planarians.

    Science.gov (United States)

    González-Estévez, Cristina; Arseni, Varvara; Thambyrajah, Roshana S; Felix, Daniel A; Aboobaker, A Aziz

    2009-01-01

    miRNAs are an important class of non-protein coding small RNAs whose specific functions in animals are rapidly being elucidated. It is clear that miRNAs can play crucial roles in stem cell maintenance, cell fate determination and differentiation. We use planarians, which possess a large population of pluripotent somatic stem cells, as a powerful model system to study many aspects of stem cell biology and regeneration. In particular we wish to investigate the regulatory role miRNAs may have in planarian stem cell self renewal, proliferation and differentiation. Here, we characterized the differential spatial patterns of expression of miRNAs in whole and regenerating planarians by in situ hybridization to nascent miRNA transcripts. These miRNA expression patterns are the first which have been determined for a Lophotrocozoan animal. We have characterized the expression patterns of 42 miRNAs in adult planarians, constituting a complete range of tissue specific expression patterns. We also followed miRNA expression during planarian regeneration. The majority of planarian miRNAs were expressed either in areas where stem cells (neoblasts) are located and/or in the nervous system. Some miRNAs were definitively expressed in stem cells and dividing cells as confirmed by in situ hybridisation after irradiation. We also found miRNAs to be expressed in germ stem cells of the sexual strain. Together, these data suggest an important role for miRNAs in stem cell regulation and in neural cell differentiation in planarians.

  13. PRICE VS QUALITY COMPETITION AND THE SPATIAL PATTERN OF AVERAGE PRICES IN INTERNATIONAL TRADE

    Directory of Open Access Journals (Sweden)

    Mattoscio Nicola

    2012-07-01

    Full Text Available This work investigates the relationship between the average export prices and the distance between the origin and the destination market in international trade. Distance between trading partners obviously stands at the core of I international trade literature and is strictly related with the issue of how countries and firms compete on export markets when transport costs become increasingly stiff. Heterogeneous-Firm Trade (HFT models predict that only most competitive firms are able to export on distant markets, where it is more difficult to recover from freight costs. However, this simple concept does not lead to unambiguous predictions on the spatial pattern of average export f.o.b. prices. \\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\r\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\

  14. Classification of multi-class motor imagery EEG using four band common spatial pattern.

    Science.gov (United States)

    Mahmood, Amama; Zainab, Rida; Ahmad, Rushda Basir; Saeed, Maryam; Kamboh, Awais Mehmood

    2017-07-01

    Brain Computer Interfaces (BCIs) serve as an integration tool between acquired brain signals and external devices. Precise classification of the acquired brain signals with the least misclassification error is an arduous task. Existing techniques for classification of multi-class motor imagery electroencephalogram (EEG) have low accuracy and are computationally inefficient. This paper introduces a classification algorithm, which uses two frequency ranges, mu and beta rythms, for feature extraction using common spatial pattern (CSP) along with support vector machine (SVM) for classification. The technique uses only four frequency bands with no feature reduction and consequently less computational cost. The implementation of this algorithm on BCI competition III dataset IIIa, resulted in the highest classification accuracy in comparison to existing algorithms. A mean accuracy of 85.5 for offline classification has been achieved using this technique.

  15. Surface Topography Guides Morphology and Spatial Patterning of Induced Pluripotent Stem Cell Colonies

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    Giulio Abagnale

    2017-08-01

    Full Text Available The relevance of topographic cues for commitment of induced pluripotent stem cells (iPSCs is largely unknown. In this study, we demonstrate that groove-ridge structures with a periodicity in the submicrometer range induce elongation of iPSC colonies, guide the orientation of apical actin fibers, and direct the polarity of cell division. Elongation of iPSC colonies impacts also on their intrinsic molecular patterning, which seems to be orchestrated from the rim of the colonies. BMP4-induced differentiation is enhanced in elongated colonies, and the submicron grooves impact on the spatial modulation of YAP activity upon induction with this morphogen. Interestingly, TAZ, a YAP paralog, shows distinct cytoskeletal localization in iPSCs. These findings demonstrate that topography can guide orientation and organization of iPSC colonies, which may affect the interaction between mechanosensors and mechanotransducers in iPSCs.

  16. Feature Extraction for BCIs Based on Electromagnetic Source Localization and Multiclass Filter Bank Common Spatial Patterns.

    Science.gov (United States)

    Zaitcev, Aleksandr; Cook, Greg; Wei Liu; Paley, Martyn; Milne, Elizabeth

    2015-08-01

    Brain-Computer Interfaces (BCIs) provide means for communication and control without muscular movement and, therefore, can offer significant clinical benefits. Electrical brain activity recorded by electroencephalography (EEG) can be interpreted into software commands by various classification algorithms according to the descriptive features of the signal. In this paper we propose a novel EEG BCI feature extraction method employing EEG source reconstruction and Filter Bank Common Spatial Patterns (FBCSP) based on Joint Approximate Diagonalization (JAD). The proposed method is evaluated by the commonly used reference EEG dataset yielding an average classification accuracy of 77.1 ± 10.1 %. It is shown that FBCSP feature extraction applied to reconstructed source components outperforms conventional CSP and FBCSP feature extraction methods applied to signals in the sensor domain.

  17. Using multivariate geostatistics to assess patterns of spatial dependence of apparent soil electrical conductivity and selected soil properties.

    Science.gov (United States)

    Siqueira, Glécio Machado; Dafonte, Jorge Dafonte; Valcárcel Armesto, Montserrat; França e Silva, Ênio Farias

    2014-01-01

    The apparent soil electrical conductivity (ECa) was continuously recorded in three successive dates using electromagnetic induction in horizontal (ECa-H) and vertical (ECa-V) dipole modes at a 6 ha plot located in Northwestern Spain. One of the ECa data sets was used to devise an optimized sampling scheme consisting of 40 points. Soil was sampled at the 0.0-0.3 m depth, in these 40 points, and analyzed for sand, silt, and clay content; gravimetric water content; and electrical conductivity of saturated soil paste. Coefficients of correlation between ECa and gravimetric soil water content (0.685 for ECa-V and 0.649 for ECa-H) were higher than those between ECa and clay content (ranging from 0.197 to 0.495, when different ECa recording dates were taken into account). Ordinary and universal kriging have been used to assess the patterns of spatial variability of the ECa data sets recorded at successive dates and the analyzed soil properties. Ordinary and universal cokriging methods have improved the estimation of gravimetric soil water content using the data of ECa as secondary variable with respect to the use of ordinary kriging.

  18. Spatial patterns of preconsolidation pressure and soil moisture along transects in two directions under coffee

    Directory of Open Access Journals (Sweden)

    Ivoney Gontijo

    2011-08-01

    Full Text Available Information on the spatial structure of soil physical and structural properties is needed to evaluate the soil quality. The purpose of this study was to investigate the spatial behavior of preconsolidation pressure and soil moisture in six transects, three selected along and three across coffee rows, at three different sites under different tillage management systems. The study was carried out on a farm, in Patrocinio, state of Minas Gerais, in the Southeast of Brazil (18 º 59 ' 15 '' S; 46 º 56 ' 47 '' W; 934 m asl. The soil type is a typic dystrophic Red Latosol (Acrustox and consists of 780 g kg-1 clay; 110 g kg-1 silt and 110 g kg-1 sand, with an average slope of 3 %. Undisturbed soil cores were sampled at a depth of 0.10-0.13 m, at three different points within the coffee plantation: (a from under the wheel track, where equipment used in farm operations passes; (b in - between tracks and (c under the coffee canopy. Six linear transects were established in the experimental area: three transects along and three across the coffee rows. This way, 161 samples were collected in the transect across the coffee rows, from the three locations, while 117 samples were collected in the direction along the row. The shortest sampling distance in the transect across the row was 4 m, and 0.5 m for the transect along the row. No clear patterns of the preconsolidation pressure values were observed in the 200 m transect. The results of the semivariograms for both variables indicated a high nugget value and short range for the studied parameters of all transects. A cyclic pattern of the parameters was observed for the across-rows transect. An inverse relationship between preconsolidation pressure and soil moisture was clearly observed in the samples from under the track, in both directions.

  19. Spatial patterns and links between microbial community composition and function in cyanobacterial mats

    KAUST Repository

    Alnajjar, Mohammad Ahmad

    2014-08-06

    We imaged reflectance and variable fluorescence in 25 cyanobacterial mats from four distant sites around the globe to assess, at different scales of resolution, spatial variabilities in the physiological parameters characterizing their photosynthetic capacity, including the absorptivity by chlorophyll a (Achl), maximum quantum yield of photosynthesis (Ymax), and light acclimation irradiance (Ik). Generally, these parameters significantly varied within individual mats on a sub-millimeter scale, with about 2-fold higher variability in the vertical than in the horizontal direction. The average vertical profiles of Ymax and Ik decreased with depth in the mat, while Achl exhibited a sub-surface maximum. The within-mat variability was comparable to, but often larger than, the between-sites variability, whereas the within-site variabilities (i.e., between samples from the same site) were generally lowest. When compared based on averaged values of their photosynthetic parameters, mats clustered according to their site of origin. Similar clustering was found when the community composition of the mats\\' cyanobacterial layers were compared by automated ribosomal intergenic spacer analysis (ARISA), indicating a significant link between the microbial community composition and function. Although this link is likely the result of community adaptation to the prevailing site-specific environmental conditions, our present data is insufficient to identify the main factors determining these patterns. Nevertheless, this study demonstrates that the spatial variability in the photosynthetic capacity and light acclimation of benthic phototrophic microbial communities is at least as large on a sub-millimeter scale as it is on a global scale, and suggests that this pattern of variability scaling is similar for the microbial community composition. © 2014 Al-Najjar, Ramette, Kühl, Hamza, Klatt and Polerecky.

  20. A large historical refugium explains spatial patterns of genetic diversity in a Neotropical savanna tree species.

    Science.gov (United States)

    Souza, Helena Augusta Viana E; Collevatti, Rosane Garcia; Lima-Ribeiro, Matheus S; Lemos-Filho, José Pires de; Lovato, Maria Bernadete

    2017-01-01

    The relative role of Pleistocene climate changes in driving the geographic distribution and genetic diversity of South American species is not well known, especially from open biomes such as the Cerrado, the most diverse tropical savanna, encompassing high levels of endemism. Here the effects of Quaternary climatic changes on demographic history, distribution dynamics and genetic diversity of Dimorphandra mollis, an endemic tree species widely distributed in the Cerrado, were investigated. A total of 38 populations covering most of the distribution of D. mollis were analysed using internal transcribed spacer (ITS) sequences and nuclear microsatellite variation [simple sequence repeats (SSRs)]. The framework incorporated statistical phylogeography, coalescent analyses and ecological niche modelling (ENM). Different signatures of Quaternary climatic changes were found for ITS sequences and SSRs corresponding to different time slices. Coalescent analyses revealed large and constant effective population sizes, with high historical connectivity among the populations for ITS sequences and low effective population sizes and gene flow with recent population retraction for SSRs. ENMs indicated a slight geographical range retraction during the Last Glacial Maximum. A large historical refugium across central Brazil was predicted. Spatially explicit analyses showed a spatial cline pattern in genetic diversity related to the paleodistribution of D. mollis and to the centre of its historical refugium. The complex genetic patterns found in D. mollis are the result of a slight geographical range retraction during the Last Glacial Maximum followed by population expansion to the east and south from a large refugium in the central part of the Cerrado. This historical refugium is coincident with an area predicted to be climatically stable under future climate scenarios. The identified refugium should be given high priority in conservation polices to safeguard the evolutionary

  1. Using multilevel spatial models to understand salamander site occupancy patterns after wildfire

    Science.gov (United States)

    Chelgren, Nathan; Adams, Michael J.; Bailey, Larissa L.; Bury, R. Bruce

    2011-01-01

    Studies of the distribution of elusive forest wildlife have suffered from the confounding of true presence with the uncertainty of detection. Occupancy modeling, which incorporates probabilities of species detection conditional on presence, is an emerging approach for reducing observation bias. However, the current likelihood modeling framework is restrictive for handling unexplained sources of variation in the response that may occur when there are dependence structures such as smaller sampling units that are nested within larger sampling units. We used multilevel Bayesian occupancy modeling to handle dependence structures and to partition sources of variation in occupancy of sites by terrestrial salamanders (family Plethodontidae) within and surrounding an earlier wildfire in western Oregon, USA. Comparison of model fit favored a spatial N-mixture model that accounted for variation in salamander abundance over models that were based on binary detection/non-detection data. Though catch per unit effort was higher in burned areas than unburned, there was strong support that this pattern was due to a higher probability of capture for individuals in burned plots. Within the burn, the odds of capturing an individual given it was present were 2.06 times the odds outside the burn, reflecting reduced complexity of ground cover in the burn. There was weak support that true occupancy was lower within the burned area. While the odds of occupancy in the burn were 0.49 times the odds outside the burn among the five species, the magnitude of variation attributed to the burn was small in comparison to variation attributed to other landscape variables and to unexplained, spatially autocorrelated random variation. While ordinary occupancy models may separate the biological pattern of interest from variation in detection probability when all sources of variation are known, the addition of random effects structures for unexplained sources of variation in occupancy and detection

  2. Temporal-Spatial Pattern of Carbon Stocks in Forest Ecosystems in Shaanxi, Northwest China.

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    Gaoyang Cui

    Full Text Available The precise and accurate quantitative evaluation of the temporal and spatial pattern of carbon (C storage in forest ecosystems is critical for understanding the role of forests in the global terrestrial C cycle and is essential for formulating forest management policies to combat climate change. In this study, we examined the C dynamics of forest ecosystems in Shaanxi, northwest China, based on four forest inventories (1989-1993, 1994-1998, 1999-2003, and 2004-2008 and field-sampling measurements (2012. The results indicate that the total C storage of forest ecosystems in Shaanxi increased by approximately 29.3%, from 611.72 Tg in 1993 to 790.75 Tg in 2008, partially as a result of ecological restoration projects. The spatial pattern of C storage in forest ecosystems mainly exhibited a latitude-zonal distribution across the province, increasing from north (high latitude to south (low latitude generally, which signifies the effect of environmental conditions, chiefly water and heat related factors, on forest growth and C sequestration. In addition, different data sources and estimation methods had a significant effect on the results obtained, with the C stocks in 2008 being considerably overestimated (864.55 Tg and slightly underestimated (778.07 Tg when measured using the mean C density method and integrated method, respectively. Overall, our results demonstrated that the forest ecosystem in Shaanxi acted as a C sink over the last few decades. However, further studies should be carried out with a focus on adaption of plants to environmental factors along with forest management for vegetation restoration to maximize the C sequestration potential and to better cope with climate change.

  3. Spatial patterns of malaria in a land reform colonization project, Juruena municipality, Mato Grosso, Brazil

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    Souza-Santos Reinaldo

    2011-06-01

    Full Text Available Abstract Background In Brazil, 99% of malaria cases are concentrated in the Amazon, and malaria's spatial distribution is commonly associated with socio-environmental conditions on a fine landscape scale. In this study, the spatial patterns of malaria and its determinants in a rural settlement of the Brazilian agricultural reform programme called "Vale do Amanhecer" in the northern Mato Grosso state were analysed. Methods In a fine-scaled, exploratory ecological study, geocoded notification forms corresponding to malaria cases from 2005 were compared with spectral indices, such as the Normalized Difference Vegetation Index (NDVI and the third component of the Tasseled Cap Transformation (TC_3 and thematic layers, derived from the visual interpretation of multispectral TM-Landsat 5 imagery and the application of GIS distance operators. Results Of a total of 336 malaria cases, 102 (30.36% were caused by Plasmodium falciparum and 174 (51.79% by Plasmodium vivax. Of all the cases, 37.6% (133 cases were from residents of a unique road. In total, 276 cases were reported for the southern part of the settlement, where the population density is higher, with notification rates higher than 10 cases per household. The local landscape mostly consists of open areas (38.79 km². Training forest occupied 27.34 km² and midsize vegetation 7.01 km². Most domiciles with more than five notified malaria cases were located near areas with high NDVI values. Most domiciles (41.78% and malaria cases (44.94% were concentrated in areas with intermediate values of the TC_3, a spectral index representing surface and vegetation humidity. Conclusions Environmental factors and their alteration are associated with the occurrence and spatial distribution of malaria cases in rural settlements.

  4. Temporal and Spatial Distribution Patterns of Echinoderm Larvae in La Parguera, Puerto Rico

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    Stacey M Williams

    2010-10-01

    Full Text Available This study describes temporal and spatial abundance patterns of echinoderm larvae in La Parguera, Puerto Rico. For the temporal study, larvae were sampled by a series of monthly tows taken with a 64μm mesh net between the new and full moon from April 2005 to July 2006, September 2006 and August 2007. In order to measure spatial variation of echinoderm larval bundances, oblique tows were taken with 64 and 202μm mesh nets at seven different sites within the shelf, at the shelf-edge, and at a nearby oceanic stations during August 2007. Overall, Echinoidea (sea urchin exhibited the highest abundance with a total of 11 921 larvae, representing 52.5% of the total collection. Ophiuroidea (brittle star ranked second in abundance with 45.6% of the total larvae. Holothuroidea (sea cucumber and Asteroidea larvae (sea star accounted for less than 2% of the total echinoderm larval collection. Early larval stages (2-8 day old of Diadema antillarum represented 20% of the total Echinoidea larvae. There was no marked seasonal trend of echinoderm larval abundance; Echinoidea and Ophiuroidea larvae were present in all monthly samples indicating that reproduction occurs year-round. Peak abundances of later-stage Echinoidea larvae were observed during January, July and October and of later-stage Ophiuroidea larvae during June, August and October. The observed peaks of later-stage larval abundances may be indicative of higher recruitment activity during these months. There was a significant difference of echinoderm larval abundance between spatial stations, with higher abundances collected at the shelf-edge. Later-stage (~24 day old D. antillarum larvae were mostly collected at shelf-edge and oceanic locations. In addition, the 64mm mesh net was more efficient for collection of echinoderm larvae than the 202mm mesh net. Rev. Biol. Trop. 58 (Suppl. 3: 81-88. Epub 2010 October 01.

  5. Temporal and spatial distribution patterns of echinoderm larvae in La Parguera, Puerto Rico.

    Science.gov (United States)

    Williams, Stacey M; Jorge, García-Sais

    2010-10-01

    This study describes temporal and spatial abundance patterns of echinoderm larvae in La Parguera, Puerto Rico. For the temporal study, larvae were sampled by a series of monthly tows taken with a 64 microm mesh net between the new and full moon from April 2005 to July 2006, September 2006 and August 2007. In order to measure spatial variation of echinoderm larval abundances, oblique tows were taken with 64 and 202 microm mesh nets at seven different sites within the shelf, at the shelf-edge, and at a nearby oceanic stations during August 2007. Overall, Echinoidea (sea urchin) exhibited the highest abundance with a total of 11 921 larvae, representing 52.5% of the total collection. Ophiuroidea (brittle star) ranked second in abundance with 45.6% of the total larvae. Holothuroidea (sea cucumber) and Asteroidea larvae (sea star) accounted for less than 2% of the total echinoderm larval collection. Early larval stages (2-8 day old) of Diadema antillarum represented 20% of the total Echinoidea larvae. There was no marked seasonal trend of echinoderm larval abundance; Echinoidea and Ophiuroidea larvae were present in all monthly samples indicating that reproduction occurs year-round. Peak abundances of later-stage Echinoidea larvae were observed during January, July and October and of later-stage Ophiuroidea larvae during June, August and October. The observed peaks of later-stage larval abundances may be indicative of higher recruitment activity during these months. There was a significant difference of echinoderm larval abundance between spatial stations, with higher abundances collected at the shelf-edge. Later-stage (approximately 24 day old) D. antillarum larvae were mostly collected at shelf-edge and oceanic locations. In addition, the 64 microm mesh net was more efficient for collection of echinoderm larvae than the 202 microm mesh net.

  6. Spatial-frequency cutoff requirements for pattern recognition in central and peripheral vision.

    Science.gov (United States)

    Kwon, Miyoung; Legge, Gordon E

    2011-09-15

    It is well known that object recognition requires spatial frequencies exceeding some critical cutoff value. People with central scotomas who rely on peripheral vision have substantial difficulty with reading and face recognition. Deficiencies of pattern recognition in peripheral vision, might result in higher cutoff requirements, and may contribute to the functional problems of people with central-field loss. Here we asked about differences in spatial-cutoff requirements in central and peripheral vision for letter and face recognition. The stimuli were the 26 letters of the English alphabet and 26 celebrity faces. Each image was blurred using a low-pass filter in the spatial frequency domain. Critical cutoffs (defined as the minimum low-pass filter cutoff yielding 80% accuracy) were obtained by measuring recognition accuracy as a function of cutoff frequency (in cycles per object). Our data showed that critical cutoffs increased from central to peripheral vision by 20% for letter recognition and by 50% for face recognition. We asked whether these differences could be accounted for by central/peripheral differences in the contrast sensitivity function (CSF). We addressed this question by implementing an ideal-observer model which incorporates empirical CSF measurements and tested the model on letter and face recognition. The success of the model indicates that central/peripheral differences in the cutoff requirements for letter and face recognition can be accounted for by the information content of the stimulus limited by the shape of the human CSF, combined with a source of internal noise and followed by an optimal decision rule. Copyright © 2011 Elsevier Ltd. All rights reserved.

  7. Gain, spatial and temporal noise, pattern, and non-linearity in QWIP focal plane array

    Science.gov (United States)

    Rafol, Don, , Sir

    2008-08-01

    Signal-to-noise ratio (SNR) depends on how the signal is generated above the noise level at the detector. For QWIP (Quantum Well Infrard Photoconductor) photoconductive gain, noise gain and quantum efficiency are important properties that determine the operating parameters in a background-limited operation. At high bias the photoconductive and noise gain becomes comparable, and this allows for the experimental extraction of its value and quantum efficiency. It is important that signal and noise at the detector are the dominant values that determine the SNR of the entire system. In addition, the amplifier gain on Read Out Integrated Circuit (ROIC) is required to be large enough in order for input referred noises from subsequent amplifiers to be insignificant. Temporal and spatial noise limits the performance of the Focal plane Array (FPA). It is assumed that the time-independent noises can be calibrated out using linear two-point non-uniformity correction (NUC). The origin of spatial noise is ROIC's fixed pattern, Cosine4 (aperture effect), dark current, pixel response variation, etc. Unfortunately, gain and offset matrices from a finite time data capture do not represent detector array and ROIC behavior at time scale much larger than the gain and offset data capture time, and therefore 1/f noises can corrupt the images at larger time scale. Thus, an investigation of spatial and temporal noise has shown dependence on the number of frames collected. Non-linearity on some QWIP FPAs makes two-point NUC inapplicable, but it is not observed on some FPAs. The origin of this is not completely understood.

  8. GIS based spatial pattern analysis: Children with Hepatitis A in Turkey.

    Science.gov (United States)

    Dogru, Ahmet Ozgur; David, Ruusa Magano; Ulugtekin, Necla; Goksel, Cigdem; Seker, Dursun Zafer; Sözen, Seval

    2017-07-01

    This study aimed to provide an insight into the geographic distribution of Hepatitis A incidence considering their temporal distribution, spatial patterns, hot spots and clusters identification in three different age-group (0-4, 5-9 and 10-14) in Turkey. Province based tabular data, including monthly numbers of Hepatitis A cases in children, and the populations from 2001 to 2011 were used as the basic input of the study. Time series maps were created using Geographic Information Systems (GIS) to introduce the temporal changes in the morbidity rates of Hepatitis A. The spatial variation of Hepatitis A was measured using Moran's I at the global level and the local indicators of spatial associations (LISAs) Moran's I and Getis-Ord G i *(d) in order to identify influential locations through clusters and hot spots detection of Hepatitis A cases. The morbidity rates in children under the age of 5 were found significantly lower than the other age-groups, whereas the age-group 5-9 revealed the highest morbidity rates in the study area. The morbidity of Hepatitis A was detected very high for the years 2001, and 2005-2007. The identification of the highly vulnerable provinces was conducted using local Moran's I and local Getis-Ord G i *(d). The majority of clusters and hot spots were detected to be agglomerated in the Eastern Mediterranean and South-Eastern Anatolian Regions and Ceyhan, Asi and Southeast part of Firat-Dicle river basins in Turkey. Copyright © 2017 Elsevier Inc. All rights reserved.

  9. Spatial distribution patterns of sheep following manipulation of feeding motivation and food availability.

    Science.gov (United States)

    Freire, R; Swain, D L; Friend, M A

    2012-05-01

    We hypothesised that (i) increased feeding motivation will cause sheep to move further apart as a result of individuals trying to find food and (ii) in conditions of high food availability, sheep will move less and show greater social attraction. The effects of both feeding motivation and food availability on spatial distribution was examined in eight groups of food-deprived (high feeding motivation) and satiated (low feeding motivation) sheep in good or poor food resource plots in a 2 × 2 design. Distance travelled was assessed using Global Positioning System collars, grazing time using scan sampling and social cohesion using proximity collars that record the number and duration of encounters within 4 m. Food-deprived sheep in the good-resource plots grazed the most, whereas satiated sheep in the poor-resource plots grazed the least (P = 0.004). Food deprivation had no significant effect on the number or duration of encounters and feeding motivation appeared to have little effect on spatial distribution. Contrary to expectation, sheep had more encounters (P = 0.04) of a longer total duration (P = 0.02) in poor-resource plots than in good-resource plots, indicating that sheep were showing more social cohesion if food was scarce. Our findings suggest that when food is scarce, animals may come together in an attempt to share information on food availability. However, when a highly preferred food is abundant and well dispersed, they may move apart in order to maximise the intake. It is concluded that the particular details of our experiment, namely the even distribution or absence of a highly preferred food, affected spatial distribution patterns as sheep tried to find this food and maximise the intake.

  10. Spatial and temporal patterns in civil violence: Guatemala, 1977-1986.

    Science.gov (United States)

    Gulden, Timothy R

    2002-03-01

    Civil violence is a complex and often horrific phenomenon whose characteristics have varied by era, setting, and circumstance. Its objective analysis has rarely been feasible at spatial and temporal scales great enough and resolutions fine enough to reveal patterns useful in prevention, intervention, or adjudication. An extraordinary data set simultaneously meeting scale and resolution criteria was collected during conflict in Guatemala from 1977 through 1986. Reported here is its spatial-temporal analysis; reported as well is a putatively novel method for estimating power-law exponents from aggregate data. Analysis showed that the relationship between ethnic mix and killing was smooth yet highly nonlinear, that the temporal texture of killings was rough, and that the distribution of killing-event sizes was dichotomous, with nongenocidal and genocidal conflict periods displaying Zipf and non-Zipf distributions, respectively. These results add statistical support to claims that the Guatemalan military operated under at least two directives with respect to killing and that one of these effected a genocidal campaign against an indigenous people, the Mayans. Implications for group-behavioral modeling, conflict prevention, peace-keeping intervention, human-rights monitoring, and transitional justice are noted.

  11. Analysis on the Changing Spatial Patterns of China's Migration in 1985-2010

    Science.gov (United States)

    Zan, Q.; Bian, Y.

    2014-11-01

    Based on the data of China's fourth, fifth and sixth population census, taking the seven geographical zone as research units, the Changing Spatial Patterns of China's Migration in 1985-2010 is studied by the means of spatial analysis and mathematical statistics. The empirical results show that: (1) The migration population in China was increasing a lot in 1985-2010, and the main part of it is Provincial migration. (2) The total number of migration, immigration and emigration, the relative proportion of inter provincial and provincial migration have been positively correlated to the regional economic development level. (3) The emigrations from Hong Kong, Macao, Taiwan and overseas mainly moved to East and North China. (4) Central and west of China are the main area where people outflowed from, and most migration population moved to south-eastern coastal areas. The migration in Northeast and northwest of China is still relatively small. The main direction of population migration and flowing is from west to east and from north to south.

  12. Spatial pattern of cell geometry and cell-division orientation in zebrafish lens epithelium

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    Toshiaki Mochizuki

    2014-09-01

    Full Text Available Cell proliferation is a key regulator of tissue morphogenesis. We examined cell proliferation and cell division in zebrafish lens epithelium by visualizing cell-cycle phases and nuclear positions, using fluorescent-labeled geminin and histone proteins. Proliferation was low in the anterior region of lens epithelium and higher in the marginal zone anterior to the equator, suggesting that the proliferation zone, called the germinative zone, is formed in zebrafish lens. Interestingly, cell-division orientation was biased longitudinally in the anterior region, shifted from longitudinal to circumferential along the anterior–posterior axis of lens sphere, and was biased circumferentially in the peripheral region. These data suggest that cell-division orientation is spatially regulated in zebrafish lens epithelium. The Hertwig rule indicates that cells tend to divide along their long axes. Orientation of long axes and cell division were biased similarly in zebrafish lens epithelium, suggesting that cell geometry correlates with cell-division orientation. A cell adhesion molecule, E-cadherin, is expressed in lens epithelium. In a zebrafish e-cadherin mutant, the long axes and cell-division orientation were shifted more longitudinally. These data suggest that E-cadherin is required for the spatial pattern of cell geometry and cell-division orientation in zebrafish lens epithelium.

  13. Effects of the distant population density on spatial patterns of demographic dynamics

    Science.gov (United States)

    Tamura, Kohei; Masuda, Naoki

    2017-08-01

    Spatio-temporal patterns of population changes within and across countries have various implications. Different geographical, demographic and econo-societal factors seem to contribute to migratory decisions made by individual inhabitants. Focusing on internal (i.e. domestic) migration, we ask whether individuals may take into account the information on the population density in distant locations to make migratory decisions. We analyse population census data in Japan recorded with a high spatial resolution (i.e. cells of size 500×500 m) for the entirety of the country, and simulate demographic dynamics induced by the gravity model and its variants. We show that, in the census data, the population growth rate in a cell is positively correlated with the population density in nearby cells up to a distance of 20 km as well as that of the focal cell. The ordinary gravity model does not capture this empirical observation. We then show that the empirical observation is better accounted for by extensions of the gravity model such that individuals are assumed to perceive the attractiveness, approximated by the population density, of the source or destination cell of migration as the spatial average over a circle of radius ≈1 km.

  14. Spatial-Temporal Patterns and Controls of Evapotranspiration across the Tibetan Plateau (2000–2012

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    Hao Zhang

    2017-01-01

    Full Text Available Evapotranspiration (ET is a key factor to further our understanding of climate change processes, especially on the Tibetan Plateau, which is sensitive to global change. Herein, the spatial patterns of ET are examined, and the effects of environmental factors on ET at different scales are explored from the years 2000 to 2012. The results indicated that a steady trend in ET was detected over the past decade. Meanwhile, the spatial distribution shows an increase of ET from the northwest to the southeast, and the rate of change in ET is lower in the middle part of the Tibetan Plateau. Besides, the positive effect of radiation on ET existed mainly in the southwest. Based on the environment gradient transects, the ET had positive correlations with temperature (R>0.85, p 0.89, p 0.75, p < 0.0001, but a negative correlation between ET and radiation (R = 0.76, p < 0.0001 was observed. We also found that the relationships between environmental factors and ET differed in the different grassland ecosystems, which indicated that vegetation type is one factor that can affect ET. Generally, the results indicate that ET can serve as a valuable ecological indicator.

  15. Effects of the distant population density on spatial patterns of demographic dynamics.

    Science.gov (United States)

    Tamura, Kohei; Masuda, Naoki

    2017-08-01

    Spatio-temporal patterns of population changes within and across countries have various implications. Different geographical, demographic and econo-societal factors seem to contribute to migratory decisions made by individual inhabitants. Focusing on internal (i.e. domestic) migration, we ask whether individuals may take into account the information on the population density in distant locations to make migratory decisions. We analyse population census data in Japan recorded with a high spatial resolution (i.e. cells of size 500×500  m ) for the entirety of the country, and simulate demographic dynamics induced by the gravity model and its variants. We show that, in the census data, the population growth rate in a cell is positively correlated with the population density in nearby cells up to a distance of 20 km as well as that of the focal cell. The ordinary gravity model does not capture this empirical observation. We then show that the empirical observation is better accounted for by extensions of the gravity model such that individuals are assumed to perceive the attractiveness, approximated by the population density, of the source or destination cell of migration as the spatial average over a circle of radius ≈1 km.

  16. Meandering River Dynamics: Spatial and Temporal Wave Growth and Non-Periodic Wave Patterns

    Science.gov (United States)

    Weiss, S.; Higdon, J.

    2014-12-01

    The evolution of meandering river channels results from interactions amongst turbulent water flow, sediment transport, and channel geometry. Most current physics-based models derive from the meander-morphodynamics equations introduced by Ikeda et al. (1981). Corresponding linear theories have focused almost exclusively on periodic sequences of small-amplitude meanders. Mathematical consideration of the equations shows that boundary conditions must be chosen carefully to yield numerical solutions for a well posed boundary value problem. The numerical algorithms presented in this work yield 2D solutions to the (corrected) Ikeda et al. (1981) equations with second order convergence in both time and space. We explore the characteristics of spatially versus temporally growing waves, as well as the effects of stochastic variations in the upstream boundary condition and in the dimensionless parameter β, which characterizes the strength of secondary flow relative to cross-stream shear. Consideration of the growth patterns for spatially growing waves provides some insight for the design of experimental systems exhibiting self sustaining river meanders.

  17. Spatial patterns of coral survivorship: impacts of adult proximity versus other drivers of localized mortality

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    David A. Gibbs

    2015-11-01

    Full Text Available Species-specific enemies may promote prey coexistence through negative distance- and density-dependent survival of juveniles near conspecific adults. We tested this mechanism by transplanting juvenile-sized fragments of the brooding corals Pocillopora damicornis and Seriatopora hystrix 3, 12, 24 and 182 cm up- and down-current of conspecific adults and monitoring their survival and condition over time. We also characterized the spatial distribution of P. damicornis and S. hystrix within replicate plots on three Fijian reef flats and measured the distribution of small colonies within 2 m of larger colonies of each species. Juvenile-sized transplants exhibited no differences in survivorship as a function of distance from adult P. damicornis or S. hystrix. Additionally, both P. damicornis and S. hystrix were aggregated rather than overdispersed on natural reefs. However, a pattern of juveniles being aggregated near adults while larger (and probably older colonies were not suggests that greater mortality near large adults could occur over longer periods of time or that size-dependent mortality was occurring. While we found minimal evidence of greater mortality of small colonies near adult conspecifics in our transplant experiments, we did document hot-spots of species-specific corallivory. We detected spatially localized and temporally persistent predation on P. damicornis by the territorial triggerfish Balistapus undulatus. This patchy predation did not occur for S. hystrix. This variable selective regime in an otherwise more uniform environment could be one mechanism maintaining diversity of corals on Indo-Pacific reefs.

  18. Spatial analysis of electricity demand patterns in Greece: Application of a GIS-based methodological framework

    Science.gov (United States)

    Tyralis, Hristos; Mamassis, Nikos; Photis, Yorgos N.

    2016-04-01

    We investigate various uses of electricity demand in Greece (agricultural, commercial, domestic, industrial use as well as use for public and municipal authorities and street lightning) and we examine their relation with variables such as population, total area, population density and the Gross Domestic Product. The analysis is performed on data which span from 2008 to 2012 and have annual temporal resolution and spatial resolution down to the level of prefecture. We both visualize the results of the analysis and we perform cluster and outlier analysis using the Anselin local Moran's I statistic as well as hot spot analysis using the Getis-Ord Gi* statistic. The definition of the spatial patterns and relationships of the aforementioned variables in a GIS environment provides meaningful insight and better understanding of the regional development model in Greece and justifies the basis for an energy demand forecasting methodology. Acknowledgement: This research has been partly financed by the European Union (European Social Fund - ESF) and Greek national funds through the Operational Program "Education and Lifelong Learning" of the National Strategic Reference Framework (NSRF) - Research Funding Program: ARISTEIA II: Reinforcement of the interdisciplinary and/ or inter-institutional research and innovation (CRESSENDO project; grant number 5145).

  19. Spatial patterns of epilepsy-related emergency department visits in California

    Directory of Open Access Journals (Sweden)

    Jim E. Banta

    2015-04-01

    Full Text Available Background. Socio-demographic factors are associated with increased emergency department (ED use among patients with epilepsy. However, there has been limited spatial analysis of such visits.Design and methods. California ED visit at the patient ZIP Code level were examined using Kulldorf’s spatial scan statistic to identify clusters of increased risk for epilepsy-related visits. Logistic regression was used to examine the relative importance of patient socio-demographics, Census-based and hospital measures. Results. During 2009-2011 there were 29,715,009 ED visits at 330 hospitals, of which 139,235 (0.5% had epilepsy (International Classification of Disease-9 345.xx as the primary diagnosis. Three large urban clusters of high epilepsy-related ED visits were centred in the cities of Los Angeles, Oakland and Stockton and a large rural clus- ter centred in Kern County. No consistent pattern by age, race/ethnicity, household structure, and income was observed among all clusters. Regression found only the Los Angeles cluster significant after adjusting for other measures. Conclusions. Geospatial analysis within a large and geographically diverse region identified a cluster within its most populous city having an increased risk of ED visits for epilepsy independent of selected socio-demographic and hospital measures. Additional research is necessary to determine whether elevated rates of ED visits represent increased prevalence of epilepsy or an inequitable system of epilepsy care.

  20. Spatially Periodic Activation Patterns of Retrosplenial Cortex Encode Route Sub-spaces and Distance Traveled.

    Science.gov (United States)

    Alexander, Andrew S; Nitz, Douglas A

    2017-06-05

    Traversal of a complicated route is often facilitated by considering it as a set of related sub-spaces. Such compartmentalization processes could occur within retrosplenial cortex, a structure whose neurons simultaneously encode position within routes and other spatial coordinate systems. Here, retrosplenial cortex neurons were recorded as rats traversed a track having recurrent structure at multiple scales. Consistent with a major role in compartmentalization of complex routes, individual retrosplenial cortex (RSC) neurons exhibited periodic activation patterns that repeated across route segments having the same shape. Concurrently, a larger population of RSC neurons exhibited single-cycle periodicity over the full route, effectively defining a framework for encoding of sub-route positions relative to the whole. The same population simultaneously provides a novel metric for distance from each route position to all others. Together, the findings implicate retrosplenial cortex in the extraction of path sub-spaces, the encoding of their spatial relationships to each other, and path integration. Copyright © 2017 Elsevier Ltd. All rights reserved.

  1. The spatial and temporal distributions of arthropods in forest canopies: uniting disparate patterns with hypotheses for specialisation.

    Science.gov (United States)

    Wardhaugh, Carl W

    2014-11-01

    Arguably the majority of species on Earth utilise tropical rainforest canopies, and much progress has been made in describing arboreal assemblages, especially for arthropods. The most commonly described patterns for tropical rainforest insect communities are host specificity, spatial specialisation (predominantly vertical stratification), and temporal changes in abundance (seasonality and circadian rhythms). Here I review the recurrent results with respect to each of these patterns and discuss the evolutionary selective forces that have generated them in an attempt to unite these patterns in a holistic evolutionary framework. I propose that species can be quantified along a generalist-specialist scale not only with respect to host specificity, but also other spatial and temporal distribution patterns, where specialisation is a function of the extent of activity across space and time for particular species. When all of these distribution patterns are viewed through the paradigm of specialisation, hypotheses that have been proposed to explain the evolution of host specificity can also be applied to explain the generation and maintenance of other spatial and temporal distribution patterns. The main driver for most spatial and temporal distribution patterns is resource availability. Generally, the distribution of insects follows that of the resources they exploit, which are spatially stratified and vary temporally in availability. Physiological adaptations are primarily important for host specificity, where nutritional and chemical variation among host plants in particular, but also certain prey species and fungi, influence host range. Physiological tolerances of abiotic conditions are also important for explaining the spatial and temporal distributions of some insect species, especially in drier forest environments where desiccation is an ever-present threat. However, it is likely that for most species in moist tropical rainforests, abiotic conditions are valuable

  2. Spatial and temporal patterns of burned area over Brazilian Cerrado from 2005 to 2015 using remote sensing data

    Science.gov (United States)

    Libonati, Renata; DaCamara, Carlos; Setzer, Alberto

    2016-04-01

    reflectances to discriminate BA. Validation over Cerrado biome indicates that the product is in accordance with BA maps from reference data, making the product suitable for applications in fire emission studies and ecosystem management. The AQM regional database covers the 11-year period 2005-2015 over Cerrado and allows analyzing the overall temporal and spatial distribution patterns of BA for the last decade. The highest monthly mean amount is observed in September, followed by October, and March presents the lowest amount. The most severe year is 2007, followed by 2005 and 2010; 2006 and 2009 are the years with less area burned, followed by 2008. The spatial pattern of BA shows that the north region of Cerrado presents the highest frequency of occurrence. The intra and inter-annual variability of BA over Cerrado are closely related to variability of precipitation but it is worth emphasizing that, despite the major role played by climate conditions, the human factor has also a prominent role on fire dynamics in this region and cannot be disregarded.

  3. Spatial patterns and eco-epidemiological systems – part I: multi-scale spatial modelling of the occurrence of Chagas disease insect vectors

    Directory of Open Access Journals (Sweden)

    Emmanuel Roux

    2011-11-01

    Full Text Available Studies that explicitly and specifically take into account the spatial dimension within the study of eco-epidemiological systems remain rare. Our approach of modelling the spatial and/or tempo