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Sample records for analysis structural dynamics

  1. Dynamic analysis of embedded structures

    International Nuclear Information System (INIS)

    Kausel, E.; Whitman, R.V.; Morray, J.P.

    1977-01-01

    The paper presents simplified rules to account for embeddment and soil layering in the soil-structure interaction problem, to be used in dynamic analysis. The relationship between the spring method, and a direct solution (in which both soil and structure are modeled with finite elements and linear members) is first presented. It is shown that for consistency of the results with the two solution methods the spring method should be performed in the following three steps: 1. Determination of the motion of the massless foundation (having the same shape as the actual one) when subjected to the same input motion as the direct solution. 2. Determination of the frequency dependent subgrade stiffness for the relevant degrees of freedom. 3. Computations of the response of the real structure supported on frequency dependent soil springs and subjected at the base of these springs to the motion computed in step 1. The first two steps require, in general, finite element methods, which would make the procedure not attractive. It is shown in the paper, however, that excellent approximations can be obtained, on the basis of 1-dimensional wave propagation theory for the solution of step 1, and correction factors modifying for embeddment the corresponding springs of a surface footing on a layered stratum, for the solution of step 2. (Auth.)

  2. Dynamic analysis and design of offshore structures

    CERN Document Server

    Chandrasekaran, Srinivasan

    2015-01-01

    This book  attempts to provide readers with an overall idea of various types of offshore platform geometries. It covers the various environmental loads encountered by these structures, a detailed description of the fundamentals of structural dynamics in a class-room style, estimate of damping in offshore structures and their applications in the preliminary analysis and design. Basic concepts of structural dynamics are emphasized through simple illustrative examples and exercises. Design methodologies and guidelines, which are FORM based concepts are explained through a few applied example structures. Each chapter also has tutorials and exercises for self-learning. A dedicated chapter on stochastic dynamics will help the students to extend the basic concepts of structural dynamics to this advanced domain of research. Hydrodynamic response of offshore structures with perforated members is one of the recent research applications, which is found to be one of the effective manner of retrofitting offshore structur...

  3. Structural Dynamics and Data Analysis

    Science.gov (United States)

    Luthman, Briana L.

    2013-01-01

    This project consists of two parts, the first will be the post-flight analysis of data from a Delta IV launch vehicle, and the second will be a Finite Element Analysis of a CubeSat. Shock and vibration data was collected on WGS-5 (Wideband Global SATCOM- 5) which was launched on a Delta IV launch vehicle. Using CAM (CAlculation with Matrices) software, the data is to be plotted into Time History, Shock Response Spectrum, and SPL (Sound Pressure Level) curves. In this format the data is to be reviewed and compared to flight instrumentation data from previous flights of the same launch vehicle. This is done to ensure the current mission environments, such as shock, random vibration, and acoustics, are not out of family with existing flight experience. In family means the peaks on the SRS curve for WGS-5 are similar to the peaks from the previous flights and there are no major outliers. The curves from the data will then be compiled into a useful format so that is can be peer reviewed then presented before an engineering review board if required. Also, the reviewed data will be uploaded to the Engineering Review Board Information System (ERBIS) to archive. The second part of this project is conducting Finite Element Analysis of a CubeSat. In 2010, Merritt Island High School partnered with NASA to design, build and launch a CubeSat. The team is now called StangSat in honor of their mascot, the mustang. Over the past few years, the StangSat team has built a satellite and has now been manifested for flight on a SpaceX Falcon 9 launch in 2014. To prepare for the final launch, a test flight was conducted in Mojave, California. StangSat was launched on a Prospector 18D, a high altitude rocket made by Garvey Spacecraft Corporation, along with their sister satellite CP9 built by California Polytechnic University. However, StangSat was damaged during an off nominal landing and this project will give beneficial insights into what loads the CubeSat experienced during the crash

  4. Structural dynamic analysis of nuclear power plants

    International Nuclear Information System (INIS)

    Halbritter, A.L.; Koishi, N.; Prates, C.L.M.

    1986-01-01

    One of the most important items to be considered in order to guarantee the safety conditions of a Nuclear Power Plant is the design of the civil structures, the electrical and mechanical components and piping system taking into account non-conventional loading cases, e.g. earthquakes and explosions pressure waves. The general procedures used in the structural dynamic analysis of Nuclear Power Plants are presented, specially for seismic and explosion loads. (Author) [pt

  5. Structural dynamic analysis of turbine blade

    Science.gov (United States)

    Antony, A. Daniel; Gopalsamy, M.; Viswanadh, Chaparala B. V.; Krishnaraj, R.

    2017-10-01

    In any gas turbine design cycle, blade design is a crucial element which needs maximum attention to meet the aerodynamic performance, structural safety margins, manufacturing feasibility, material availability etc. In present day gas turbine engines, most of the failures occur during engine development test and in-service, in rotor and stator blades due to fatigue and resonance failures. To address this issue, an extensive structural dynamic analysis is carried out to predict the natural frequencies and mode shapes using FE methods. Using the dynamics characteristics, the Campbell diagram is constructed to study the possibility of resonance at various operating speeds. In this work, the feasibility of using composite material in place of titanium alloy from the structural dynamics point of view. This is being attempted in a Low-pressure compressor where the temperatures are relatively low and fixed with the casings. The analysis will be carried out using FE method for different composite material with different lamina orientations chosen through the survey. This study will focus on the sensitivity of blade mode shapes to different laminae orientations, which will be used to alter the natural frequency and tailor the mode shapes. Campbell diagrams of existing titanium alloy are compared with the composite materials with different laminae at all critical operating conditions. The existing manufacturing methods and the proven techniques for blade profiles will also be discussed in this report.

  6. DYNAMIC AND STRUCTURAL ANALYSIS OF TANGIBLE ASSETS

    Directory of Open Access Journals (Sweden)

    ECOBICI MIHAELA LOREDANA

    2016-12-01

    Full Text Available Any company’s economic activity uses material resources in order to achieve the business objective. These consist of two categories of assets: fixed assets, especially the tangible and current assets and their efficient use and operation are some of the most important conditions for the smooth running of the production of a company. Tangible assets constitute the basic assets that any company can use over a period of 1 year and more and contribute to the production of goods, execution of works and provision of services, or they may be used for administrative purposes. Research and conslusions concerning this issue have resulted in the premises of a successful production activity of the company, in which the role, the importance and the effectiveness of the use of fixed assets will always constitute the basis for a obtaining satisfactory performance. The purpose of this article is the approach and illustration of the use of fixed assets, taking into consideration the following aspects: the structural and the dynamic analysis, as well as the analysis of the influence of the components of fixed assets.

  7. Uncertain structural dynamics of aircraft panels and fuzzy structures analysis

    Science.gov (United States)

    Sparrow, Victor W.; Buehrle, Ralph D.

    2002-11-01

    Aircraft fuselage panels, seemingly simple structures, are actually complex because of the uncertainty of the attachments of the frame stiffeners and longitudinal stringers. It is clearly important to understand the dynamics of these panels because of the subsequent radiation into the passenger cabin, even when complete information is not available for all portions of the finite-element model. Over the last few years a fuzzy structures analysis (FSA) approach has been undertaken at Penn State and NASA Langley to quantify the uncertainty in modeling aircraft panels. A new MSC.Nastran [MSC.Software Corp. (Santa Ana, CA)] Direct Matrix Abstraction Program (DMAP) code was written and tested [AIAA paper 2001-1320, 42nd AIAA/ASME/ASCE/AHS/ASC Structures, Structural Dynamics, and Materials Conf., Seattle, WA, 16 April 2001] and was applied to simple fuselage panel models [J. Acoust. Soc. Am. 109, 2410(A) (2001)]. Recently the work has focused on understanding the dynamics of a realistic aluminum fuselage panel, typical of today's aircraft construction. This presentation will provide an overview of the research and recent results will be given for the fuselage panel. Comparison between experiments and the FSA results will be shown for different fuzzy input parameters. [Work supported by NASA Research Cooperative Agreement NCC-1-382.

  8. Finite Element Vibration and Dynamic Response Analysis of Engineering Structures

    Directory of Open Access Journals (Sweden)

    Jaroslav Mackerle

    2000-01-01

    Full Text Available This bibliography lists references to papers, conference proceedings, and theses/dissertations dealing with finite element vibration and dynamic response analysis of engineering structures that were published from 1994 to 1998. It contains 539 citations. The following types of structures are included: basic structural systems; ground structures; ocean and coastal structures; mobile structures; and containment structures.

  9. Discretization model for nonlinear dynamic analysis of three dimensional structures

    International Nuclear Information System (INIS)

    Hayashi, Y.

    1982-12-01

    A discretization model for nonlinear dynamic analysis of three dimensional structures is presented. The discretization is achieved through a three dimensional spring-mass system and the dynamic response obtained by direct integration of the equations of motion using central diferences. First the viability of the model is verified through the analysis of homogeneous linear structures and then its performance in the analysis of structures subjected to impulsive or impact loads, taking into account both geometrical and physical nonlinearities is evaluated. (Author) [pt

  10. Modal analysis application for dynamic characterization of simple structures

    International Nuclear Information System (INIS)

    Pastorini, A.J.; Belinco, C.G.

    1987-01-01

    The knowledge of the dynamic characteristics of a structure helps to foresee the vibrating behaviour under operating conditions. The modal analysis techniques offer a method to perform the dynamic characterization of a studied structure from the vibration modes of such structure. A hammer provided with a loaded cell to excite a wide frequency band and accelerometer and, on the basis of a measurement of the transfer function at different points, various simple structures were given with a dynamic structures analysis (of the type of Fourier's rapidly transformation) and the results were compared with those obtained by other methods. Different fields where these techniques are applied, are also enumerated. (Author)

  11. Wheat yield dynamics: a structural econometric analysis.

    Science.gov (United States)

    Sahin, Afsin; Akdi, Yilmaz; Arslan, Fahrettin

    2007-10-15

    In this study we initially have tried to explore the wheat situation in Turkey, which has a small-open economy and in the member countries of European Union (EU). We have observed that increasing the wheat yield is fundamental to obtain comparative advantage among countries by depressing domestic prices. Also the changing structure of supporting schemes in Turkey makes it necessary to increase its wheat yield level. For this purpose, we have used available data to determine the dynamics of wheat yield by Ordinary Least Square Regression methods. In order to find out whether there is a linear relationship among these series we have checked each series whether they are integrated at the same order or not. Consequently, we have pointed out that fertilizer usage and precipitation level are substantial inputs for producing high wheat yield. Furthermore, in respect for our model, fertilizer usage affects wheat yield more than precipitation level.

  12. Structural dynamics in fast reactor accident analysis

    International Nuclear Information System (INIS)

    Fistedis, S.H.

    1975-01-01

    Analyses and codes are under development combining the hydrodynamics and solid mechanics (and more recently the bubble dynamics) phenomena to gage the stresses, strains, and deformations of important primary components, as well as the overall adequacy of primary and secondary containments. An arbitrary partition of the structural components treated evolves into (1) a core mechanics effort; and (2) a primary system and containment program. The primary system and containment program treats the structural response of components beyond the core, starting with the core barrel. Combined hydrodynamics-solid mechanics codes provide transient stresses and strains and final deformations for components such as the reactor vessel, reactor cover, cover holddown bolts, as well as the pulses for which the primary piping system is to be analyzed. Both, Lagrangian and Eulerian two-dimensional codes are under development, which provide greater accuracy and longer durations for the treatment of HCDA. The codes are being augmented with bubble migration capability pertaining to the latter stages of the HCDA, after slug impact. Recent developments involve the adaptation of the 2-D Eulerian primary system code to the 2-D elastic-plastic treatment of primary piping. Pulses are provided at the vessel-primary piping interfaces of the inlet and outlet nozzles, calculation includes the elbows and pressure drops along the components of the primary piping system. Recent improvements to the primary containment codes include introduction of bending strength in materials, Langrangian mesh regularization techniques, and treatment of energy absorbing materials for the slug impact. Another development involves the combination of a 2-D finite element code for the reactor cover with the hydrodynamic containment code

  13. Dynamic Behavior Analysis via Structured Rank Minimization

    NARCIS (Netherlands)

    Georgakis, Christos; Panagakis, Yannis; Pantic, Maja

    2017-01-01

    Human behavior and affect is inherently a dynamic phenomenon involving temporal evolution of patterns manifested through a multiplicity of non-verbal behavioral cues including facial expressions, body postures and gestures, and vocal outbursts. A natural assumption for human behavior modeling is

  14. Structural Dynamics

    International Nuclear Information System (INIS)

    Kim, Du Gi

    2005-08-01

    This book introduces summary of structural dynamics, the reason of learning of structural dynamics, single-degree of freedom system, simple harmonic vibration and application, numerical analysis method, such as time domain and frequency domain and nonlinear system, multi-degree of freedom system random vibration over discrete distribution, continuous distribution and extreme value distribution, circumstance vibration, earth quake vibration, including input earthquake, and earthquake-resistant design and capacity spectrum method, wind oscillation wave vibration, vibration control and maintenance control.

  15. Dynamic characteristics analysis of deployable space structures considering joint clearance

    Science.gov (United States)

    Li, Tuanjie; Guo, Jian; Cao, Yuyan

    2011-04-01

    The clearance in joints influences the dynamic stability and the performance of deployable space structures (DSS). A virtual experimental modal analysis (VEMA) method is proposed to deal with the effects of joint clearance and link flexibility on the dynamic characteristics of the DSS in this paper. The focus is on the finite element modeling of the clearance joint, VEMA and the modal parameters identification of the DSS. The finite element models (FEM) of the clearance joint and the deployable structure are established in ANSYS. The transient dynamic analysis is conducted to provide the time history data of excitation and response for the VEMA. The fast Fourier transform (FFT) technique is used to transform the data from time domain to frequency domain. The frequency response function is calculated to identify the modal parameters of the deployable structure. Experimental verification is provided to indicate the VEMA method is both a cost and time efficient approach to obtain the dynamic characteristics of the DSS. Finally, we analyze the effects of clearance size and gravity on the dynamic characteristics of the DSS. The analysis results indicate that the joint clearance and gravity strongly influence the dynamic characteristics of the DSS.

  16. The ABRAVIBE toolbox for teaching vibration analysis and structural dynamics

    DEFF Research Database (Denmark)

    Brandt, A.

    2013-01-01

    Vibration analysis is a subject where students often find it hard to comprehend the fundamental theory. The fact that we have, in general, almost no intuition for dynamic phenomena, means that students need to explore various dynamic phenomena in order to grasp the subject. For this reason......, a MATLAB toolbox (the ABRAVIBE toolbox) has been developed as an accompanying toolbox for the recent book "Noise and Vibration Analysis" by the author. This free, open software, published under GNU Public License, can be used with GNU Octave, if an entirely free software platform is wanted, with a few......). In this paper, an overview of the functionality is given and recommended use in teaching is discussed. It is also shown how the toolbox can be used for general vibration analysis using data from multichannel measurements. Finally, some laboratory exercises for structural dynamics teaching are discussed...

  17. Musical structure analysis using similarity matrix and dynamic programming

    Science.gov (United States)

    Shiu, Yu; Jeong, Hong; Kuo, C.-C. Jay

    2005-10-01

    Automatic music segmentation and structure analysis from audio waveforms based on a three-level hierarchy is examined in this research, where the three-level hierarchy includes notes, measures and parts. The pitch class profile (PCP) feature is first extracted at the note level. Then, a similarity matrix is constructed at the measure level, where a dynamic time warping (DTW) technique is used to enhance the similarity computation by taking the temporal distortion of similar audio segments into account. By processing the similarity matrix, we can obtain a coarse-grain music segmentation result. Finally, dynamic programming is applied to the coarse-grain segments so that a song can be decomposed into several major parts such as intro, verse, chorus, bridge and outro. The performance of the proposed music structure analysis system is demonstrated for pop and rock music.

  18. Fluid and structural-dynamic piping system analysis

    International Nuclear Information System (INIS)

    Korthauer, H.J.; Lange, H.; Rychlik, G.

    1993-01-01

    By means of the fluid and structural-dynamic analyses conducted, the cooling system was qualified for all fluid-dynamic processes in normal and anomalous operation and in case of accidents. The boundary conditions assumed by us for the fluid and structural-dynamic analyses were confirmed by the forces and movements measured time for some operating conditions as a function of time. Expensive hardware measures such as additional supports or replacement of Tees were not necessary as we combined the fluid and structural-dynamic analyses and then demonstrated safety of the supports, connected components and some of the piping elements as such. (author)

  19. Dynamic Analysis of Partially Embedded Structures Considering Soil-Structure Interaction in Time Domain

    Directory of Open Access Journals (Sweden)

    Sanaz Mahmoudpour

    2011-01-01

    Full Text Available Analysis and design of structures subjected to arbitrary dynamic loadings especially earthquakes have been studied during past decades. In practice, the effects of soil-structure interaction on the dynamic response of structures are usually neglected. In this study, the effect of soil-structure interaction on the dynamic response of structures has been examined. The substructure method using dynamic stiffness of soil is used to analyze soil-structure system. A coupled model based on finite element method and scaled boundary finite element method is applied. Finite element method is used to analyze the structure, and scaled boundary finite element method is applied in the analysis of unbounded soil region. Due to analytical solution in the radial direction, the radiation condition is satisfied exactly. The material behavior of soil and structure is assumed to be linear. The soil region is considered as a homogeneous half-space. The analysis is performed in time domain. A computer program is prepared to analyze the soil-structure system. Comparing the results with those in literature shows the exactness and competency of the proposed method.

  20. Neighborhood structure effects on the Dynamic response of soil-structure interaction by harmonic analysis

    Directory of Open Access Journals (Sweden)

    Pan Dan-guang

    2015-01-01

    Full Text Available For realizing the variation of structural dynamic characteristics due to neighbor structure in buildings group, the surface structure is idealized as an equivalent single degree of freedom system with rigid base whose site consists of a single homogeneous layer. Based on the model, a equivalent method on the equivalent seismic excitation is proposed. Then, the differences of seismic response and equivalent seismic input between soil - structure interaction (SSI system and structure -soil-structure interaction (SSSI system are investigated by harmonic analysis. The numerical results show that dynamic responses would be underestimated in SSSI system when the forcing frequencies are close to the Natural frequency if the effects of neighborhood structure were ignored. Neighborhood structure would make the translational displacement increase and rocking vibration decrease. When establishing an effective seismic input, it is necessary to consider the impact of inertia interaction.

  1. Shaking of reinforced concrete structures subjected to transient dynamic analysis

    International Nuclear Information System (INIS)

    Rouzaud, Christophe

    2015-01-01

    In the design of nuclear engineering structures security and safety present a crucial aspect. Civil engineering design and the qualification of materials to dynamic loads must consider the accelerations which they undergo. These accelerations could integrate seismic activity and shaking movements consecutive to aircraft impact with higher cut-off frequency. Current methodologies for assessing this shock are based on transient analyses using classical finite element method associated with explicit numerical schemes or projection on modal basis, often linear. In both cases, to represent in meaningful way a medium-frequency content, it should implement a mesh refinement which is hardly compatible with the size of models of the civil engineering structures. In order to extend industrial methodologies used and to allow a better representation of the behavior of the structure in medium-frequency, an approach coupling a temporal and non-linear analysis for shock area with a frequency approach to treatment of shaking with VTCR (Variational Theory of Complex Rays) has been used. The aim is to use the computational efficiency of the implemented strategy, including medium frequency to describe the nuclear structures to aircraft impact. (author)

  2. Structural dynamic analysis with generalized damping models analysis

    CERN Document Server

    Adhikari , Sondipon

    2013-01-01

    Since Lord Rayleigh introduced the idea of viscous damping in his classic work ""The Theory of Sound"" in 1877, it has become standard practice to use this approach in dynamics, covering a wide range of applications from aerospace to civil engineering. However, in the majority of practical cases this approach is adopted more for mathematical convenience than for modeling the physics of vibration damping. Over the past decade, extensive research has been undertaken on more general ""non-viscous"" damping models and vibration of non-viscously damped systems. This book, along with a related book

  3. Fundamentals of structural dynamics

    CERN Document Server

    Craig, Roy R

    2006-01-01

    From theory and fundamentals to the latest advances in computational and experimental modal analysis, this is the definitive, updated reference on structural dynamics.This edition updates Professor Craig's classic introduction to structural dynamics, which has been an invaluable resource for practicing engineers and a textbook for undergraduate and graduate courses in vibrations and/or structural dynamics. Along with comprehensive coverage of structural dynamics fundamentals, finite-element-based computational methods, and dynamic testing methods, this Second Edition includes new and e

  4. Parameter identification for structural dynamics based on interval analysis algorithm

    Science.gov (United States)

    Yang, Chen; Lu, Zixing; Yang, Zhenyu; Liang, Ke

    2018-04-01

    A parameter identification method using interval analysis algorithm for structural dynamics is presented in this paper. The proposed uncertain identification method is investigated by using central difference method and ARMA system. With the help of the fixed memory least square method and matrix inverse lemma, a set-membership identification technology is applied to obtain the best estimation of the identified parameters in a tight and accurate region. To overcome the lack of insufficient statistical description of the uncertain parameters, this paper treats uncertainties as non-probabilistic intervals. As long as we know the bounds of uncertainties, this algorithm can obtain not only the center estimations of parameters, but also the bounds of errors. To improve the efficiency of the proposed method, a time-saving algorithm is presented by recursive formula. At last, to verify the accuracy of the proposed method, two numerical examples are applied and evaluated by three identification criteria respectively.

  5. Application of Incremental Dynamic Analysis (IDA Method for Studying the Dynamic Behavior of Structures During Earthquakes

    Directory of Open Access Journals (Sweden)

    M. Javanpour

    2017-02-01

    Full Text Available Prediction of existing buildings’ vulnerability by future earthquakes is one of the most essential topics in structural engineering. Modeling steel structures is a giant step in determining the damage caused by the earthquake, as such structures are increasingly being used in constructions. Hence, two same-order steel structures with two types of structural systems were selected (coaxial moment frames and moment frame. In most cases, a specific structure needs to satisfy several functional levels. For this purpose, a method is required to determine the input request to the structures under possible earthquakes. Therefore, the Incremental Dynamic Analysis (IDA was preferred to the Push-Over non-linear static method for the analysis and design of the considered steel structures, due its accuracy and effect of higher modes at the same time intervals. OpenSees software was used to perform accurate nonlinear analysis of the steel structure. Two parameters (spectral acceleration and maximum ground acceleration were introduced to the modeled frames to compare the numerical correlations of seismic vulnerability obtained by two statistical methods based on the "log-normal distribution" and "logistics distribution", and finally, the parameters of displacement and drift were assessed after analysis.

  6. Structural dynamics

    CERN Document Server

    Strømmen, Einar N

    2014-01-01

    This book introduces to the theory of structural dynamics, with focus on civil engineering structures that may be described by line-like beam or beam-column type of systems, or by a system of rectangular plates. Throughout this book the mathematical presentation contains a classical analytical description as well as a description in a discrete finite element format, covering the mathematical development from basic assumptions to the final equations ready for practical dynamic response predictions. Solutions are presented in time domain as well as in frequency domain. Structural Dynamics starts off at a basic level and step by step brings the reader up to a level where the necessary safety considerations to wind or horizontal ground motion induced dynamic design problems can be performed. The special theory of the tuned mass damper has been given a comprehensive treatment, as this is a theory not fully covered elsewhere. For the same reason a chapter on the problem of moving loads on beams has been included.

  7. Accuracy of Dynamic and Acoustic Analysis of Lightweight Panel Structures

    DEFF Research Database (Denmark)

    Kirkegaard, Poul Henning; Dickow, Kristoffer Ahrens; Andersen, Lars Vabbersgaard

    2012-01-01

    in such buildings is important. In the lowfrequency range, prediction of sound and vibration in building structures may be achieved by finite-element analysis (FEA). The aim of this paper is to compare the two commercial codes ABAQUS and ANSYS for FEA of an acoustic-structural coupling in a timber lightweight panel...

  8. Dynamic analysis of clustered building structures using substructures methods

    International Nuclear Information System (INIS)

    Leimbach, K.R.; Krutzik, N.J.

    1989-01-01

    The dynamic substructure approach to the building cluster on a common base mat starts with the generation of Ritz-vectors for each building on a rigid foundation. The base mat plus the foundation soil is subjected to kinematic constraint modes, for example constant, linear, quadratic or cubic constraints. These constraint modes are also imposed on the buildings. By enforcing kinematic compatibility of the complete structural system on the basis of the constraint modes a reduced Ritz model of the complete cluster is obtained. This reduced model can now be analyzed by modal time history or response spectrum methods

  9. Structural Modeling and Analysis on Dynamic Characteristics of Antenna Pedestal in Airborne SAR

    Directory of Open Access Journals (Sweden)

    He Li-ping

    2012-06-01

    Full Text Available Finite element modeling and structural dynamic characteristics of antenna pedestal in airborne SAR were studied in this paper. The Finite element model of antenna pedestal in airborne SAR was set up on the basis of structural dynamic theory, then, the key technologies of dynamic simulation were pointed out, and the modal analysis and transient analysis were carried out. Simulation results show that the dynamic characteristics of antenna pedestal in airborne SAR can meet the requirements of servo bandwidth and structural strength. The fast finite element modeling and simulation method proposed in this paper are of great significance to the weight reducing design of antenna pedestal in airborne SAR.

  10. Dynamic analysis of an industrial structure with fluid-structure interaction

    International Nuclear Information System (INIS)

    Sigrist, J.F.

    2006-01-01

    The present paper deals with the dynamic analysis of a nuclear reactor subjected to a shock loading with fluid-structure interaction modeling. The general framework of the study is that of linear vibrations, which are investigated for coupled fluid-structure problems. From a methodological point of view, energy deformation and modal mass calculation are exposed for elasto-acoustic systems. From an industrial point of view, the influence of elasto-acoustic coupling effects are highlighted for the studied structure. The dynamic analysis of the coupled system is carried out with various procedures (static, spectral and temporal methods), which are exposed and compared. As a general result, the spectral method is proved to be the most effective for the industrial problem. From the numerical point of view, the discretization procedure is based on a finite element method for the coupled problem, using a displacement and pressure-displacement potential coupled formulation with axi-symmetric representation of the problem unknowns. A finite element code is developed within MATLAB for the specific study, the numerical calculations presented in the paper are used as reference test cases for integration of the (u,p,φ) formulation in the commercial finite element code Ansys. (author)

  11. Dynamic Error Analysis Method for Vibration Shape Reconstruction of Smart FBG Plate Structure

    Directory of Open Access Journals (Sweden)

    Hesheng Zhang

    2016-01-01

    Full Text Available Shape reconstruction of aerospace plate structure is an important issue for safe operation of aerospace vehicles. One way to achieve such reconstruction is by constructing smart fiber Bragg grating (FBG plate structure with discrete distributed FBG sensor arrays using reconstruction algorithms in which error analysis of reconstruction algorithm is a key link. Considering that traditional error analysis methods can only deal with static data, a new dynamic data error analysis method are proposed based on LMS algorithm for shape reconstruction of smart FBG plate structure. Firstly, smart FBG structure and orthogonal curved network based reconstruction method is introduced. Then, a dynamic error analysis model is proposed for dynamic reconstruction error analysis. Thirdly, the parameter identification is done for the proposed dynamic error analysis model based on least mean square (LMS algorithm. Finally, an experimental verification platform is constructed and experimental dynamic reconstruction analysis is done. Experimental results show that the dynamic characteristics of the reconstruction performance for plate structure can be obtained accurately based on the proposed dynamic error analysis method. The proposed method can also be used for other data acquisition systems and data processing systems as a general error analysis method.

  12. Analysis of Dynamic Properties of Piezoelectric Structure under Impact Load

    Directory of Open Access Journals (Sweden)

    Taotao Zhang

    2015-10-01

    Full Text Available An analytical model of the dynamic properties is established for a piezoelectric structure under impact load, without considering noise and perturbations in this paper. Based on the general theory of piezo-elasticity and impact mechanics, the theoretical solutions of the mechanical and electrical fields of the smart structure are obtained with the standing and traveling wave methods, respectively. The comparisons between the two methods have shown that the standing wave method is better for studying long-time response after an impact load. In addition, good agreements are found between the theoretical and the numerical results. To simulate the impact load, both triangle and step pulse loads are used and comparisons are given. Furthermore, the influence of several parameters is discussed so as to provide some advices for practical use. It can be seen that the proposed analytical model would benefit, to some extent, the design and application (especially the airport runway of the related smart devices by taking into account their impact load performance.

  13. [Analysis on age structure and dynamics of Kindonia uniflora populations].

    Science.gov (United States)

    Zhang, Wenhui; Li, Jingxia; Li, Hong; Liu, Xiangjun

    2004-04-01

    Kindonia uniflora is a perennial clone herbaceous plant, and also, a native endangered plant in China. This paper studied its age structure, life table and survivorship curve in different habitats in Taibai mountain area. The results indicated that the age structure and dynamics of K. uniflora populations in the Betula utilis forest at altitude 2500-2700 m, in the Abies fargesii forest at altitude 2700-2900 m, and in the Larix chinensis forest at altitude 2900-3100 m had the similar pattern and developing tendency. The number of younger ramets at 1-2 years old or older than 5 years was less, and the number of ramets at 3-5 years old was the highest in the age structures. The negative values of dx (dead number), qx (mortality rate) and Kx (Killing rate) in the life table showed the increasing rate of the population sizes during the age stage. The survivorship curve of K. uniflora populations in different habitats belonged to Deevey C after 3-5 years old. The mortality rate of populations during 5-10 years stage was higher, and was stable after 10 years old. As for the characters of asexual propagation and clone growth, the rhizomes of the populations were in humus of soil, and developed and expanded as guerilla line style. During growth season, only one leaf grew above ground at every inter-node, and the population growth and development were rarely influenced by external factors. The forest communities, such as Betula utilis, Abies fargesii and Larix chinensis forest, in which K. uniflora populations lived, were at middle or higher mountain, where there were rarely disturbance from human being. Therefore, the habitats for K. uniflora populations to live were relatively stable. As the altitude increased, the disturbances from human being became less, the density of K. uniflora populations increased, the life cycle expanded, the peak of population death delayed, and the population living strategy changed to adapt to the habitats. K. uniflora populations preferred to

  14. A simple model for the dynamic analysis of deteriorating structures

    International Nuclear Information System (INIS)

    Andreaus, U.; Ceradini, G.; D'Asdia, P.

    1983-01-01

    A simple model exhibiting a multi-linear constitutive law is presented which describes the behaviour of structural members and subassemblages under severe cyclic loading. The proposed model allows for: 1) pinched form of force-displacement diagrams due to, e.g., cracks in reinforced concrete members and masonry panels; 2) slippage effects due to lack of bond of steel bars in reinforced concrete and clearances in steel bolted connections; 3) post-buckling behaviour of subassemblages with unstable members; 4) cumulative damage affecting strength and/or stiffness at low cycle fatigue. The parameters governing the model behaviour have to be estimated on the basis of experimental results. The model is well suitable for analysis under statically applied cyclic displacements and forces, and under earthquake excitation. An X-type bracing system is then worked out where the member behaviour is schematized according to the proposed model. (orig.)

  15. Dynamic Analysis with Fibre Optic Sensors for Structural Health Monitoring

    National Research Council Canada - National Science Library

    Paolozzi, Antonio; Gasbarri, Paolo

    2006-01-01

    Structural Health Monitoring (SHM) is a new frontier of non destructing testing. Often SHM is associated with fibre optic sensors whose signals can be used to identify the structure and consequently its damage...

  16. Sequential Structural and Fluid Dynamics Analysis of Balloon-Expandable Coronary Stents: A Multivariable Statistical Analysis.

    Science.gov (United States)

    Martin, David; Boyle, Fergal

    2015-09-01

    Several clinical studies have identified a strong correlation between neointimal hyperplasia following coronary stent deployment and both stent-induced arterial injury and altered vessel hemodynamics. As such, the sequential structural and fluid dynamics analysis of balloon-expandable stent deployment should provide a comprehensive indication of stent performance. Despite this observation, very few numerical studies of balloon-expandable coronary stents have considered both the mechanical and hemodynamic impact of stent deployment. Furthermore, in the few studies that have considered both phenomena, only a small number of stents have been considered. In this study, a sequential structural and fluid dynamics analysis methodology was employed to compare both the mechanical and hemodynamic impact of six balloon-expandable coronary stents. To investigate the relationship between stent design and performance, several common stent design properties were then identified and the dependence between these properties and both the mechanical and hemodynamic variables of interest was evaluated using statistical measures of correlation. Following the completion of the numerical analyses, stent strut thickness was identified as the only common design property that demonstrated a strong dependence with either the mean equivalent stress predicted in the artery wall or the mean relative residence time predicted on the luminal surface of the artery. These results corroborate the findings of the large-scale ISAR-STEREO clinical studies and highlight the crucial role of strut thickness in coronary stent design. The sequential structural and fluid dynamics analysis methodology and the multivariable statistical treatment of the results described in this study should prove useful in the design of future balloon-expandable coronary stents.

  17. On the use of Stockwell transform in structural dynamic analysis

    Indian Academy of Sciences (India)

    quake records in order to get better understanding of earthquake source, path and site effect. They are also used ... fect spectral resolution are inadequate to understand the variation of frequency in time throug- hout the ... CHB019 stations on Kyoshin Network, Japan are selected to calculate the dynamic character- istics of ...

  18. Static and Dynamic Analysis in Design of Exoskeleton Structure

    Science.gov (United States)

    Ivánkova, Ol’ga; Méri, Dávid; Vojteková, Eva

    2017-10-01

    This paper introduces a numerical experiment of creating the load bearing system of a high rise building. When designing the high-rise building, it is always an important task to find the right proportion between the height of the building and its perceptive width from the various angles of street view. Investigated high rise building in this article was designed according to these criteria. The load bearing structure of the analysed object consists of a reinforced core, plates and steel tubes of an exoskeleton. Eight models of the building were created using the spatial variant of FEM in Scia Engineer Software. Individual models varied in number and dimensions of diagrids in the exoskeleton. In the models, loadings due to the own weight, weight of external glass cladding, and due to the wind according to the Standard, have been considered. The building was loaded by wind load from all four main directions with respect to its shape. Wind load was calculated using the 3D wind generator, which is a part of the Scia Engineer Software. For each model the static analysis was performed. Its most important criterion was the maximum or minimum horizontal displacement (rotation) of the highest point of the building. This displacement was compared with the limit values of the displacement of the analysed high-rise building. By step-by-step adding diagrids and optimizing their dimensions the building model was obtained that complied with the criteria of the Limit Serviceability State. The last model building was assessed also for the Ultimate Limit State. This model was loaded also by seismic loads for comparison with the load due to the wind.

  19. APPLICATION OF AEM IN PROGRESSIVE COLLAPSE DYNAMICS ANALYSIS OF R.C. STRUCTURES

    OpenAIRE

    Osama El-Mahdy; El-Sayed El-Kasaby; Hala Abusafa; Amr El-Gamal

    2018-01-01

    The Finite Element Method (FEM) and the other numerical strategies are viably actualized in linear and non-linear analysis of structures. Recently, a new displacement based on Applied Element Method (AEM) has been developed. It is applicable for static and dynamic for both linear and non-linear analysis of framed and continuum structures. In AEM, the structural member is partitioned into virtual elements connected through normal and shear springs representing stresses and strains of certain p...

  20. Dynamic Analysis of Wind Turbines Including Soil-Structure Interaction

    DEFF Research Database (Denmark)

    Harte, M.; Basu, B.; Nielsen, Søren R.K.

    2012-01-01

    blades and includes the effect of centrifugal stiffening due to rotation. The foundation of the structure is modeled as a rigid gravity based foundation with two DOF whose movement is related to the surrounding soil by means of complex impedance functions generated using cone model. Transfer functions...... for displacement of the turbine system are obtained and the modal frequencies of the combined turbine-foundation system are estimated. Simulations are presented for the MDOF turbine structure subjected to wind loading for different soil stiffness conditions. Steady state and turbulent wind loading, developed using...... blade element momentum theory and the Kaimal spectrum, have been considered. Soil stiffness and damping properties acquired from DNV/Risø standards are used as a comparison. The soil-structure interaction is shown to affect the response of the wind turbine. This is examined in terms of the turbine...

  1. Model Reduction in Dynamic Finite Element Analysis of Lightweight Structures

    DEFF Research Database (Denmark)

    Flodén, Ola; Persson, Kent; Sjöström, Anders

    2012-01-01

    The application of wood as a construction material when building multi-storey buildings has many advantages, e.g., light weight, sustainability and low energy consumption during the construction and lifecycle of the building. However, compared to heavy structures, it is a greater challenge to bui...

  2. On the use of Stockwell transform in structural dynamic analysis

    Indian Academy of Sciences (India)

    Wavelet transform has undertaken fast theoretical and application-oriented development in the last two ... earthquake and its application is demonstrated for the nonlinear response of three-story frame structure for the .... a huge number of records in seismology along with the recent big data studies in geophysics, astronomy ...

  3. On a finite dynamic element method for free vibration analysis of structures

    Science.gov (United States)

    Gupta, K. K.

    1976-01-01

    This paper explores the concept of finite dynamic elements involving higher order dynamic correction terms in the associated stiffness and mass matrices. Such matrices are then developed for a rectangular prestressed membrane element. Next, efficient analysis techniques for the eigenproblem solution of the resulting quadratic matrix equations are described in detail. These are followed by suitable numerical examples which indicate that employment of such dynamic elements in conjunction with an efficient quadratic matric solution technique will result in a most significant economy in the free vibration analysis of structures.

  4. On the use of Stockwell transform in structural dynamic analysis

    Indian Academy of Sciences (India)

    Time-frequency analysis of earthquake records using Fourier transform is a fundamental, reliable and useful tool in earthquake engineering and engineering seismology. It will be however no longer functional if the frequency variation is analysed in time domain. Short time Fourier transform is utilized for the same purpose ...

  5. Cryo-electron microscopy for structural analysis of dynamic biological macromolecules.

    Science.gov (United States)

    Murata, Kazuyoshi; Wolf, Matthias

    2018-02-01

    Since the introduction of what became today's standard for cryo-embedding of biological macromolecules at native conditions more than 30years ago, techniques and equipment have been drastically improved and the structure of biomolecules can now be studied at near atomic resolution by cryo-electron microscopy (cryo-EM) while capturing multiple dynamic states. Here we review the recent progress in cryo-EM for structural studies of dynamic biological macromolecules. We provide an overview of the cryo-EM method and introduce contemporary studies to investigate biomolecular structure and dynamics, including examples from the recent literature. Cryo-EM is a powerful tool for the investigation of biological macromolecular structures including analysis of their dynamics by using advanced image-processing algorithms. The method has become even more widely applicable with present-day single particle analysis and electron tomography. The cryo-EM method can be used to determine the three-dimensional structure of biomacromolecules in near native condition at close to atomic resolution, and has the potential to reveal conformations of dynamic molecular complexes. This article is part of a Special Issue entitled "Biophysical Exploration of Dynamical Ordering of Biomolecular Systems" edited by Dr. Koichi Kato. Copyright © 2017 The Authors. Published by Elsevier B.V. All rights reserved.

  6. Dynamic analysis of structures with solid-fluid interaction

    International Nuclear Information System (INIS)

    Nahavandi, A.N.; Pedrido, R.R.; Cloud, R.L.

    1977-01-01

    This study develops a finite element model for interaction between an elastic solid and fluid medium (flow-induced vibrations in nuclear reactor components). Plane triangular finite elements have been used separately for fluid, solid, and solid-fluid continuua and the equivalent mass, damping, and stiffness matrices and interaction load arrays for all elements are derived and assembled into global matrices. The global matrix differential equation of motion developed is solved in time to obtain the pressure and velocity distributions in the fluid, as well as the displacements in the solid. Two independent computer programs are used to obtain the dynamic solution. The first program is a finite element program developed for solid-fluid interaction studies. This program uses the modal superposition technique in which the eigenvalues and eigenvectors for the system are found and used to uncouple the equations. This approach allows an analytic solution in each integration time step. The second program is WECAN finite element program in which a new element library subroutine for solid-fluid interaction was incorporated. This program can employ a NASTRAN direct integration scheme based on a central difference formula for the acceleration and velocity terms and an implicit representation of the displacement term. This reduces the problem to a matrix equation whose right hand side is updated in every time step and is solved by a variation of the Gaussian elimination method known as the wave front technique. Results have been obtained for the case of water, between two flat elastic parallel plates, initially at rest and accelerated suddenly by applying a step pressure. The results obtained from the above-mentioned two independent finite element programs are in full agreement. This verification provides the confidence needed to initiate parametric studies. Both rigid wall (no solid-fluid interaction) and flexible wall (including solid-fluid interaction) cases were examined

  7. Structural analysis of pole assignment and stabilization in dynamic systems

    OpenAIRE

    Şefik, Ayla

    1989-01-01

    Ankara : The Department of Electrical and Electronics Engineering and the Institute of Engineering and Sciences of Bilkent Univ. , 1989. Thesis (Ph.D.) -- Bilkent University, 1989. Includes bibliographical references leaves 127-132. Motivated by the need for qualitative investigation of general system properties such as controllability, obser\\^bility, existence of fixed modes, etc. as the complement of the quantitative approach in analysis, especially of large-scale systems,...

  8. Some considerations on the dynamic structure-soil-structure interactions analysis

    International Nuclear Information System (INIS)

    Matthees, W.

    1979-01-01

    A mixed method has been developed for the approximate analysis of soil-structure or structure-soil-structure interaction problems due to earthquakes. In order to produce comparable results of interaction problems as well as for shallow and for deep soils due to the same earthquake excitation (accelerogram) situated always at the lower bedrock boundary, the analysis is performed in two steps: 1) Calculation of the complex transfer function and the response of the upper interior boundary of a layered soil-system which is connected at its top to a soil-structure-system, using the one-dimensional deconvolution. 2) By making a complete interaction analysis of the surface soil-structure-system using the interior boundary excitation of the calculated response from step 1. The depth of the soil-structure-system must be chosen large enough to exclude interaction effects down to the layered soil-system's interior boundary. (orig.)

  9. A rheonomic model for the dynamical analysis of the structure-soil interaction

    International Nuclear Information System (INIS)

    Chiroiu, V.; Nicolae, V.

    1993-01-01

    The dynamical analysis of the structure-soil interaction requires an adequate modeling of the geometrical radiation phenomenon (g.r.) i.e. the propagation of the vibrating energy of the structure in the infinite medium. Newton's law of motion is not including the g.r., considered in this paper like an irreversible phenomenon. To incorporate this, a new wave motion equation is proposed, according to a complete analysis of the structure-soil interactions with an adequate formulation of the g.r. By using a system of fundamental dynamical solutions, the rheonom constraint applied to the half-space is represented as a restriction to the displacement solutions. A dimensionless formulation of the problem and the variation of dynamical and energetical quantities in respect to the frequency, as according to the diagram of the characteristic curve of g.r. are presented numerically. Sample results showing the importance of radiation energy for several motions are also shown

  10. Importance of structural damping in the dynamic analysis of compliant deployable structures

    Science.gov (United States)

    Dewalque, Florence; Rochus, Pierre; Brüls, Olivier

    2015-06-01

    Compliant mechanisms such as tape springs are often used on satellites to deploy appendices, e.g. solar panels, antennas, telescopes and solar sails. Their main advantage comes from the fact that their motion results from the elastic deformation of structural components and the absence of actuators or external energy sources. The mechanical behaviour of a tape spring is intrinsically complex and nonlinear involving buckling, hysteresis and self-locking phenomena. In the majority of the previous works, dynamic simulations were performed without any physical representation of the structural damping. These simulations could be successfully achieved because of the presence of numerical damping in the transient solver. However, in this case, the dynamic response turns out to be quite sensitive to the amount of numerical dissipation, so that the predictive capabilities of the model are questionable. In this work based on numerical case studies, we show that the dynamic simulation of a tape spring can be made less sensitive to numerical parameters when the structural dissipation is taken into account.

  11. A review on model updating of joint structure for dynamic analysis purpose

    Directory of Open Access Journals (Sweden)

    Zahari S.N.

    2016-01-01

    Full Text Available Structural joints provide connection between structural element (beam, plate etc. in order to construct a whole assembled structure. There are many types of structural joints such as bolted joint, riveted joints and welded joints. The joints structures significantly contribute to structural stiffness and dynamic behaviour of structures hence the main objectives of this paper are to review on method of model updating on joints structure and to discuss the guidelines to perform model updating for dynamic analysis purpose. This review paper firstly will outline some of the existing finite element modelling works of joints structure. Experimental modal analysis is the next step to obtain modal parameters (natural frequency & mode shape to validate and improve the discrepancy between results obtained from experimental and the simulation counterparts. Hence model updating will be carried out to minimize the differences between the two results. There are two methods of model updating; direct method and iterative method. Sensitivity analysis employed using SOL200 in NASTRAN by selecting the suitable updating parameters to avoid ill-conditioning problem. It is best to consider both geometrical and material properties in the updating procedure rather than choosing only a number of geometrical properties alone. Iterative method was chosen as the best model updating procedure because the physical meaning of updated parameters are guaranteed although this method required computational effort compare to direct method.

  12. Simplified Dynamic Structural Time History Response Analysis of Flexible Approach Walls Founded on Clustered Pile Groups Using Impact_Deck

    Science.gov (United States)

    2016-07-01

    displacements). These differences explain why a dynamic analysis is required versus a static analysis, which the user provided impact load is applied as...structural response forces (and displacements). These differences explain why a dynamic analysis is required versus a static analysis in which the...forces (and displacements). These differences explain why a dynamic analysis is required versus a static analysis in which the user-provided impact load

  13. Preliminary Dynamic Siol-Structure-Interaction Analysis for the Waste Handling Building

    Energy Technology Data Exchange (ETDEWEB)

    G. Wagenblast

    2000-05-01

    The objective of this analysis package is to document a preliminary dynamic seismic evaluation of a simplified design concept of the Wade Handling Building (WHB). Preliminary seismic ground motions and soil data will be used. Loading criteria of the WHB System Design Description will be used. Detail design of structural members will not be performed.. The results of the analysis will be used to determine preliminary sizes of structural concrete and steel members and to determine whether the seismic response of the structure is within an acceptable level for future License Application design of safety related facilities. In order to complete this preliminary dynamic evaluation to meet the Site Recommendation (SR) schedule, the building configuration was ''frozen in time'' as the conceptual design existed in October 1999. Modular design features and dry or wet waste storage features were intentionally excluded from this preliminary dynamic seismic evaluation. The document was prepared in accordance with the Development Plan for the ''Preliminary/Dynamic Soil Structure Interaction Analysis for the Waste Handling Building'' (CRWMS M&O 2000b), which was completed, in accordance with AP-2.13Q, ''Technical Product Development Planning''.

  14. Structural dynamics in FBR

    International Nuclear Information System (INIS)

    Bhoje, S.B.

    2003-01-01

    In view of thin walled large diameter shell structures with associated fluid effects, structural dynamics problems are very critical in a fast breeder reactor. Structural characteristics and consequent structural dynamics problems in typical pool type Fast Breeder Reactor are highlighted. A few important structural dynamics problems are pump induced as well as flow induced vibrations, seismic excitations, pressure transients in the intermediate heat exchangers and pipings due to a large sodium water reaction in the steam generator, and core disruptive accident loadings. The vibration problems which call for identification of excitation forces, formulation of special governing equations and detailed analysis with fluid structure interaction and sloshing effects, particularly for the components such as PSP, inner vessel, CP, CSRDM and TB are elaborated. Seismic design issues are presented in a comprehensive way. Other transient loadings which are specific to FBR, resulting from sodium-water reaction and core disruptive accident are highlighted. A few important results of theoretical as well as experimental works carried out for 500 MWe Prototype Fast Breeder Reactor (PFBR), in the domain of structural dynamics are presented. (author)

  15. Structural dynamic modification

    Indian Academy of Sciences (India)

    for are lumped masses, springs, dampers and dynamic absorbers. Keywords. Structural dynamic modification; structural design; dynamic design; SDM using FRF. 1. Introduction. The problem of varying the dynamic behaviour of structures to reduce the vibration response or control the noise radiated by vibrating surfaces is ...

  16. Slow dynamics of a protein backbone in molecular dynamics simulation revealed by time-structure based independent component analysis

    Energy Technology Data Exchange (ETDEWEB)

    Naritomi, Yusuke [Department of Supramolecular Biology, Graduate School of Nanobioscience, Yokohama City University, 1-7-29 Suehiro-cho, Tsurumi-ku, Yokohama 230-0045 (Japan); Fuchigami, Sotaro, E-mail: sotaro@tsurumi.yokohama-cu.ac.jp [Department of Medical Life Science, Graduate School of Medical Life Science, Yokohama City University, 1-7-29 Suehiro-cho, Tsurumi-ku, Yokohama 230-0045 (Japan)

    2013-12-07

    We recently proposed the method of time-structure based independent component analysis (tICA) to examine the slow dynamics involved in conformational fluctuations of a protein as estimated by molecular dynamics (MD) simulation [Y. Naritomi and S. Fuchigami, J. Chem. Phys. 134, 065101 (2011)]. Our previous study focused on domain motions of the protein and examined its dynamics by using rigid-body domain analysis and tICA. However, the protein changes its conformation not only through domain motions but also by various types of motions involving its backbone and side chains. Some of these motions might occur on a slow time scale: we hypothesize that if so, we could effectively detect and characterize them using tICA. In the present study, we investigated slow dynamics of the protein backbone using MD simulation and tICA. The selected target protein was lysine-, arginine-, ornithine-binding protein (LAO), which comprises two domains and undergoes large domain motions. MD simulation of LAO in explicit water was performed for 1 μs, and the obtained trajectory of C{sub α} atoms in the backbone was analyzed by tICA. This analysis successfully provided us with slow modes for LAO that represented either domain motions or local movements of the backbone. Further analysis elucidated the atomic details of the suggested local motions and confirmed that these motions truly occurred on the expected slow time scale.

  17. GPU-accelerated analysis and visualization of large structures solved by molecular dynamics flexible fitting.

    Science.gov (United States)

    Stone, John E; McGreevy, Ryan; Isralewitz, Barry; Schulten, Klaus

    2014-01-01

    Hybrid structure fitting methods combine data from cryo-electron microscopy and X-ray crystallography with molecular dynamics simulations for the determination of all-atom structures of large biomolecular complexes. Evaluating the quality-of-fit obtained from hybrid fitting is computationally demanding, particularly in the context of a multiplicity of structural conformations that must be evaluated. Existing tools for quality-of-fit analysis and visualization have previously targeted small structures and are too slow to be used interactively for large biomolecular complexes of particular interest today such as viruses or for long molecular dynamics trajectories as they arise in protein folding. We present new data-parallel and GPU-accelerated algorithms for rapid interactive computation of quality-of-fit metrics linking all-atom structures and molecular dynamics trajectories to experimentally-determined density maps obtained from cryo-electron microscopy or X-ray crystallography. We evaluate the performance and accuracy of the new quality-of-fit analysis algorithms vis-à-vis existing tools, examine algorithm performance on GPU-accelerated desktop workstations and supercomputers, and describe new visualization techniques for results of hybrid structure fitting methods.

  18. APPLICATION OF AEM IN PROGRESSIVE COLLAPSE DYNAMICS ANALYSIS OF R.C. STRUCTURES

    Directory of Open Access Journals (Sweden)

    Osama El-Mahdy

    2018-01-01

    Full Text Available The Finite Element Method (FEM and the other numerical strategies are viably actualized in linear and non-linear analysis of structures. Recently, a new displacement based on Applied Element Method (AEM has been developed. It is applicable for static and dynamic for both linear and non-linear analysis of framed and continuum structures. In AEM, the structural member is partitioned into virtual elements connected through normal and shear springs representing stresses and strains of certain portion of structure. FEM assumes the material as continuous and can indicate highly stressed region of structure, however it is difficult to model separation of element unless crack location is known. The main advantage of AEM is that it can track the structural collapse behavior going through all phases of the application of loads. In the current research, the application of AEM is illustrated through a non-linear dynamic analysis. Progressive collapse simulation is conducted using Extreme Loading for Structures software (ELS, which follows the AEM. The experimental and analytical works carried by Park et al. [17 and 28] for 1/5 scaled 3 and 5 stories reinforced concrete structures are used for verification. Good matching between the experimental and numerical results has been obtained using ELS. Therefore, it can be confirmed that ELS is capable in simulating the structures’ behavior up to collapse. Furthermore, a study has been made to investigate the effect of considering the floor slabs on progressive collapse. The results show that considering slab in progressive collapse analysis of multistory buildings is important as neglecting the slabs’ contribution leads to incorrect simulation and uneconomic design.

  19. Analysis of structural dynamic characteristics of a high speed light special catamaran

    Science.gov (United States)

    Sun, Li-Ping; Nie, Wu; Zhang, Wei

    2006-03-01

    In this paper, structural dynamic characteristics of a high-speed light special catamaran-wave piercing catamaran are analyzed using the FEA software MSC-NASTRAN. The dynamic reduction method is introduced to eliminate the local vibration modes in order to obtain the whole ship’s mode shapes. In the post-processor, a lot of accessorial methods are adopted to eliminate the local vibrations, so that the whole ship’s mode shapes can be identified. The modal analysis indicates that the dynamic reduction method fits for mode shapes identifying. In the end, the test results of a catamaran named Frederick G. Greed are used for reference to validate the obtained results. The comparison process shows that the results are credible. A special mode shape, which is quite different with that of conventional monohull ship, is also pointed out. The obtained results provide a valuable reference for the coming computation of catamaran’s vibration characteristics.

  20. Structure and dynamics of European sports science textual contents: Analysis of ECSS abstracts (1996-2014).

    Science.gov (United States)

    Hristovski, Robert; Aceski, Aleksandar; Balague, Natalia; Seifert, Ludovic; Tufekcievski, Aleksandar; Cecilia, Aguirre

    2017-02-01

    The article discusses general structure and dynamics of the sports science research content as obtained from the analysis of 21998 European College of Sport Science abstracts belonging to 12 science topics. The structural analysis showed intertwined multidisciplinary and unifying tendencies structured along horizontal (scope) and vertical (level) axes. Methodological (instrumental and mode of inquiry) integrative tendencies are dominant. Theoretical integrative tendencies are much less detectable along both horizontal and vertical axes. The dynamic analysis of written abstracts text content over the 19 years reveals the contextualizing and guiding role of thematic skeletons of each sports science topic in forming more detailed contingent research ideas and the role of the latter in stabilizing and procreating the former. This circular causality between both hierarchical levels and functioning on separate characteristic time scales is crucial for understanding how stable research traditions self-maintain and self-procreate through innovative contingencies. The structure of sports science continuously rebuilds itself through use and re-use of contingent research ideas. The thematic skeleton ensures its identity and the contingent conceptual sets its flexibility and adaptability to different research or applicative problems.

  1. On the structure of dynamic principal component analysis used in statistical process monitoring

    DEFF Research Database (Denmark)

    Vanhatalo, Erik; Kulahci, Murat; Bergquist, Bjarne

    2017-01-01

    driven method to determine the maximum number of lags in DPCA with a foundation in multivariate time series analysis. The method is based on the behavior of the eigenvalues of the lagged autocorrelation and partial autocorrelation matrices. Given a specific lag structure we also propose a method......When principal component analysis (PCA) is used for statistical process monitoring it relies on the assumption that data are time independent. However, industrial data will often exhibit serial correlation. Dynamic PCA (DPCA) has been suggested as a remedy for high-dimensional and time...

  2. Structural and functional analysis of glycoprotein butyrylcholinesterase using atomistic molecular dynamics

    Science.gov (United States)

    Bernardi, Austen; Faller, Roland

    Atomistic molecular dynamics (MD) has proven to be a powerful tool for studying the structure and dynamics of biological systems on nanosecond to microsecond time scales and nanometer length scales. In this work we study the effects of modifying the glycan distribution on the structure and function of full length monomeric butyrylcholinesterase (BChE). BChE exists as a monomer, dimer, or tetramer, and is a therapeutic glycoprotein with nine asparagine glycosylation sites per monomer. Each monomer acts as a stoichiometric scavenger for organophosphorus (OP) nerve agents (e.g. sarin, soman). Glycan distributions are highly heterogeneous and have been shown experimentally to affect certain glycoproteins' stability and reactivity. We performed structural analysis of various biologically relevant glycoforms of BChE using classical atomistic MD. Functional analysis was performed through binding energy simulations using umbrella sampling with BChE and OP cofactors. Additionally, we assess the quality of the glycans' conformational sampling. We found that the glycan distribution has a significant effect on the structure and function of BChE on timescales available to atomistic MD. This project is funded by the DTRA Grant HDTRA1-15-1-0054.

  3. Predicting Dynamic Response of Structures under Earthquake Loads Using Logical Analysis of Data

    Directory of Open Access Journals (Sweden)

    Ayman Abd-Elhamed

    2018-04-01

    Full Text Available In this paper, logical analysis of data (LAD is used to predict the seismic response of building structures employing the captured dynamic responses. In order to prepare the data, computational simulations using a single degree of freedom (SDOF building model under different ground motion records are carried out. The selected excitation records are real and of different peak ground accelerations (PGA. The sensitivity of the seismic response in terms of displacements of floors to the variation in earthquake characteristics, such as soil class, characteristic period, and time step of records, peak ground displacement, and peak ground velocity, have also been considered. The dynamic equation of motion describing the building model and the applied earthquake load are presented and solved incrementally using the Runge-Kutta method. LAD then finds the characteristic patterns which lead to forecast the seismic response of building structures. The accuracy of LAD is compared to that of an artificial neural network (ANN, since the latter is the most known machine learning technique. Based on the conducted study, the proposed LAD model has been proven to be an efficient technique to learn, simulate, and blindly predict the dynamic response behaviour of building structures subjected to earthquake loads.

  4. Combined spatiotemporal ICA (stICA) for continuous and dynamic lag structure analysis of MREG data.

    Science.gov (United States)

    Raatikainen, Ville; Huotari, Niko; Korhonen, Vesa; Rasila, Aleksi; Kananen, Janne; Raitamaa, Lauri; Keinänen, Tuija; Kantola, Jussi; Tervonen, Osmo; Kiviniemi, Vesa

    2017-03-01

    This study investigated lag structure in the resting-state fMRI by applying a novel independent component (ICA) method to magnetic resonance encephalography (MREG) data. Briefly, the spatial ICA (sICA) was used for defining the frontal and back nodes of the default mode network (DMN), and the temporal ICA (tICA), which is enabled by the high temporal resolution of MREG (TR=100ms), was used to separate both neuronal and physiological components of these two spatial map regions. Subsequently, lag structure was investigated between the frontal (DMNvmpf) and posterior (DMNpcc) DMN nodes using both conventional method with all-time points and a sliding-window approach. A rigorous noise exclusion criterion was applied for tICs to remove physiological pulsations, motion and system artefacts. All the de-noised tICs were used to calculate the null-distributions both for expected lag variability over time and over subjects. Lag analysis was done for the three highest correlating denoised tICA pairs. Mean time lag of 0.6s (± 0.5 std) and mean absolute correlation of 0.69 (± 0.08) between the highest correlating tICA pairs of DMN nodes was observed throughout the whole analyzed period. In dynamic 2min window analysis, there was large variability over subjects as ranging between 1-10sec. Directionality varied between these highly correlating sources an average 28.8% of the possible number of direction changes. The null models show highly consistent correlation and lag structure between DMN nodes both in continuous and dynamic analysis. The mean time lag of a null-model over time between all denoised DMN nodes was 0.0s and, thus the probability of having either DMNpcc or DMNvmpf as a preceding component is near equal. All the lag values of highest correlating tICA pairs over subjects lie within the standard deviation range of a null-model in whole time window analysis, supporting the earlier findings that there is a consistent temporal lag structure across groups of

  5. Structural Dynamics Laboratory (SDL)

    Data.gov (United States)

    Federal Laboratory Consortium — Structural dynamic testing is performed to verify the survivability of a component or assembly when exposed to vibration stress screening, or a controlled simulation...

  6. X-ray diffraction and molecular-dynamics studies: Structural analysis of phases in diglyceride monolayers

    DEFF Research Database (Denmark)

    Peters, Günther H.J.; Larsen, Niels Bent; Bjørnholm, T.

    1998-01-01

    We report a detailed structural analysis of the phases of 1,2-sn-dipalmitoylglycerol Langmuir monolayers at room temperature. Pressure-induced transitions have been investigated by combination of molecular-dynamics simulations and grazing-incidence x-ray diffraction (XRD). The diglyceride film......; At the lowest pressure the tilt angle reaches approximate to 14 degrees in a direction close to a nearest neighbor direction. Both arrangements of the alkyl chains are confirmed by XRD. For higher order and fractional order Bragg peaks, simulations predict higher intensities than observed with XRD. This may...

  7. Response and reliability analysis of nonlinear uncertain dynamical structures by the probability density evolution method

    DEFF Research Database (Denmark)

    Nielsen, Søren R. K.; Peng, Yongbo; Sichani, Mahdi Teimouri

    2016-01-01

    The paper deals with the response and reliability analysis of hysteretic or geometric nonlinear uncertain dynamical systems of arbitrary dimensionality driven by stochastic processes. The approach is based on the probability density evolution method proposed by Li and Chen (Stochastic dynamics...... of structures, 1st edn. Wiley, London, 2009; Probab Eng Mech 20(1):33–44, 2005), which circumvents the dimensional curse of traditional methods for the determination of non-stationary probability densities based on Markov process assumptions and the numerical solution of the related Fokker–Planck and Kolmogorov......–Feller equations. The main obstacle of the method is that a multi-dimensional convolution integral needs to be carried out over the sample space of a set of basic random variables, for which reason the number of these need to be relatively low. In order to handle this problem an approach is suggested, which...

  8. Nonlinear dynamic analysis of multi-base seismically isolated structures with uplift potential II: verification examples

    Science.gov (United States)

    Roussis, Panayiotis C.; Tsopelas, Panos C.; Constantinou, Michael C.

    2010-03-01

    The work presented in this paper serves as numerical verification of the analytical model developed in the companion paper for nonlinear dynamic analysis of multi-base seismically isolated structures. To this end, two numerical examples have been analyzed using the computational algorithm incorporated into program 3D-BASIS-ME-MB, developed on the basis of the newly-formulated analytical model. The first example concerns a seven-story model structure that was tested on the earthquake simulator at the University at Buffalo and was also used as a verification example for program SAP2000. The second example concerns a two-tower, multi-story structure with a split-level seismic-isolation system. For purposes of verification, key results produced by 3D-BASIS-ME-MB are compared to experimental results, or results obtained from other structural/finite element programs. In both examples, the analyzed structure is excited under conditions of bearing uplift, thus yielding a case of much interest in verifying the capabilities of the developed analysis tool.

  9. Elastic-plastic finite element analysis-to-test correlation for structures subjected to dynamic loading

    Energy Technology Data Exchange (ETDEWEB)

    Hodge, S.C.; Minicucci, J.M. [Electric Boat Corp., Groton, CT (United States)

    1997-11-01

    A test program was undertaken to demonstrate the ability of elastic-plastic finite element methods to predict dynamic inelastic response for simple structural members. Cantilever and fixed-beam specimens were tested to levels that produced plastic straining in the range of 2.0% and to 3.0% and permanent sets. Acceleration, strain, and displacement data were recorded for use in analytical correlation. Correlation analyses were performed using the ABAQUS finite element code. Results of the correlation show that current elastic-plastic analysis techniques accurately capture dynamic inelastic response (displacement, acceleration) due to rapidly applied dynamic loading. Peak elastic and inelastic surface strains are accurately predicted. To accurately capture inelastic straining near connections, a solid model, including fillet welds, is necessary. The hardening models currently available in the ABAQUS code (isotropic, kinematic) do not accurately capture inelastic strain reversals caused by specimen rebound. Analyses performed consistently underpredicted the peak strain level of the first inelastic reversal and the rebound deflection and overpredicted the permanent set of structures experiencing inelastic rebound. Based on these findings, an improved hardening model is being implemented in the ABAQUS code by the developers. The intent of this model upgrade is to improve the ability of the program to capture inelastic strain reversals and to predict permanent sets.

  10. Basic structural dynamics

    CERN Document Server

    Anderson, James C

    2012-01-01

    A concise introduction to structural dynamics and earthquake engineering Basic Structural Dynamics serves as a fundamental introduction to the topic of structural dynamics. Covering single and multiple-degree-of-freedom systems while providing an introduction to earthquake engineering, the book keeps the coverage succinct and on topic at a level that is appropriate for undergraduate and graduate students. Through dozens of worked examples based on actual structures, it also introduces readers to MATLAB, a powerful software for solving both simple and complex structural d

  11. Development of a Probabilistic Dynamic Synthesis Method for the Analysis of Nondeterministic Structures

    Science.gov (United States)

    Brown, A. M.

    1998-01-01

    Accounting for the statistical geometric and material variability of structures in analysis has been a topic of considerable research for the last 30 years. The determination of quantifiable measures of statistical probability of a desired response variable, such as natural frequency, maximum displacement, or stress, to replace experience-based "safety factors" has been a primary goal of these studies. There are, however, several problems associated with their satisfactory application to realistic structures, such as bladed disks in turbomachinery. These include the accurate definition of the input random variables (rv's), the large size of the finite element models frequently used to simulate these structures, which makes even a single deterministic analysis expensive, and accurate generation of the cumulative distribution function (CDF) necessary to obtain the probability of the desired response variables. The research presented here applies a methodology called probabilistic dynamic synthesis (PDS) to solve these problems. The PDS method uses dynamic characteristics of substructures measured from modal test as the input rv's, rather than "primitive" rv's such as material or geometric uncertainties. These dynamic characteristics, which are the free-free eigenvalues, eigenvectors, and residual flexibility (RF), are readily measured and for many substructures, a reasonable sample set of these measurements can be obtained. The statistics for these rv's accurately account for the entire random character of the substructure. Using the RF method of component mode synthesis, these dynamic characteristics are used to generate reduced-size sample models of the substructures, which are then coupled to form system models. These sample models are used to obtain the CDF of the response variable by either applying Monte Carlo simulation or by generating data points for use in the response surface reliability method, which can perform the probabilistic analysis with an order of

  12. Robust Structural Analysis and Design of Distributed Control Systems to Prevent Zero Dynamics Attacks

    Energy Technology Data Exchange (ETDEWEB)

    Weerakkody, Sean [Carnegie Mellon Univ., Pittsburgh, PA (United States); Liu, Xiaofei [Carnegie Mellon Univ., Pittsburgh, PA (United States); Sinopoli, Bruno [Carnegie Mellon Univ., Pittsburgh, PA (United States)

    2017-12-12

    We consider the design and analysis of robust distributed control systems (DCSs) to ensure the detection of integrity attacks. DCSs are often managed by independent agents and are implemented using a diverse set of sensors and controllers. However, the heterogeneous nature of DCSs along with their scale leave such systems vulnerable to adversarial behavior. To mitigate this reality, we provide tools that allow operators to prevent zero dynamics attacks when as many as p agents and sensors are corrupted. Such a design ensures attack detectability in deterministic systems while removing the threat of a class of stealthy attacks in stochastic systems. To achieve this goal, we use graph theory to obtain necessary and sufficient conditions for the presence of zero dynamics attacks in terms of the structural interactions between agents and sensors. We then formulate and solve optimization problems which minimize communication networks while also ensuring a resource limited adversary cannot perform a zero dynamics attacks. Polynomial time algorithms for design and analysis are provided.

  13. Structural Dynamics, Vol. 9

    DEFF Research Database (Denmark)

    Nielsen, Søren R.K.

    This book has been prepared for the course on Computational Dynamics given at the 8th semester at the structural program in civil engineering at Aalborg University.......This book has been prepared for the course on Computational Dynamics given at the 8th semester at the structural program in civil engineering at Aalborg University....

  14. Structural dynamic modifications via models

    Indian Academy of Sciences (India)

    2nd Int. Modal Analysis Conference (Orlando) 2: 930±936. Natke H G (ed.) 1982 Identification of vibrating structures (New York: Springer Verlag, Wein). Rao S S 1989 Optimum design of structures under shock and vibration environment. Shock Vibr. Dig. 21(7):. Ravi S S A 1994 Structural dynamic modifications and design ...

  15. Rate Dependent Multicontinuum Progressive Failure Analysis of Woven Fabric Composite Structures under Dynamic Impact

    Directory of Open Access Journals (Sweden)

    James Lua

    2004-01-01

    Full Text Available Marine composite materials typically exhibit significant rate dependent response characteristics when subjected to extreme dynamic loading conditions. In this work, a strain-rate dependent continuum damage model is incorporated with multicontinuum technology (MCT to predict damage and failure progression for composite material structures. MCT treats the constituents of a woven fabric composite as separate but linked continua, thereby allowing a designer to extract constituent stress/strain information in a structural analysis. The MCT algorithm and material damage model are numerically implemented with the explicit finite element code LS-DYNA3D via a user-defined material model (umat. The effects of the strain-rate hardening model are demonstrated through both simple single element analyses for woven fabric composites and also structural level impact simulations of a composite panel subjected to various impact conditions. Progressive damage at the constituent level is monitored throughout the loading. The results qualitatively illustrate the value of rate dependent material models for marine composite materials under extreme dynamic loading conditions.

  16. Nonlinear dynamics of structures

    CERN Document Server

    Oller, Sergio

    2014-01-01

    This book lays the foundation of knowledge that will allow a better understanding of nonlinear phenomena that occur in structural dynamics.   This work is intended for graduate engineering students who want to expand their knowledge on the dynamic behavior of structures, specifically in the nonlinear field, by presenting the basis of dynamic balance in non‐linear behavior structures due to the material and kinematics mechanical effects.   Particularly, this publication shows the solution of the equation of dynamic equilibrium for structure with nonlinear time‐independent materials (plasticity, damage and frequencies evolution), as well as those time dependent non‐linear behavior materials (viscoelasticity and viscoplasticity). The convergence conditions for the non‐linear dynamic structure solution  are studied, and the theoretical concepts and its programming algorithms are presented.  

  17. A 3-NODE PIEZOELECTRIC SHELL ELEMENT FOR LINEAR AND GEOMETRICALLY NONLINEAR DYNAMIC ANALYSIS OF SMART STRUCTURES

    Directory of Open Access Journals (Sweden)

    Gil Rama

    2017-04-01

    Full Text Available Composite laminates consisting of passive and multi-functional materials represent a powerful material system. Passive layers could be made of isotropic materials or fiber-reinforced composites, while piezoelectric ceramics are considered here as a multi-functional material. The paper is focused on  linear and geometrically nonlinear dynamic analysis of smart structures made of such a material system. For this purpose, a linear 3-node shell element is used. It employs the Mindlin-Reissner kinematics and the discrete shear gap (DSG technique to alleviate the transverse shear locking effects. The electric potential is assumed to vary linearly through the thickness for each piezoelectric layer. A co-rotational formulation is used to handle the geometrically nonlinear effects. A number of examples involving actuator and sensor application of piezoelectric layers are considered. For the validation purposes, the results available in the literature and those computed in Abaqus are used as a reference.

  18. The structure and dynamics of cities urban data analysis and theoretical modeling

    CERN Document Server

    Barthelemy, Marc

    2016-01-01

    With over half of the world's population now living in urban areas, the ability to model and understand the structure and dynamics of cities is becoming increasingly valuable. Combining new data with tools and concepts from statistical physics and urban economics, this book presents a modern and interdisciplinary perspective on cities and urban systems. Both empirical observations and theoretical approaches are critically reviewed, with particular emphasis placed on derivations of classical models and results, along with analysis of their limits and validity. Key aspects of cities are thoroughly analyzed, including mobility patterns, the impact of multimodality, the coupling between different transportation modes, the evolution of infrastructure networks, spatial and social organisation, and interactions between cities. Drawing upon knowledge and methods from areas of mathematics, physics, economics and geography, the resulting quantitative description of cities will be of interest to all those studying and r...

  19. DYNAPCON: a computer code for dynamic analysis of prestressed concrete structures

    International Nuclear Information System (INIS)

    Marchertas, A.H.

    1982-09-01

    A finite element computer code for the transient analysis of prestressed concrete reactor vessels (PCRVs) for LMFBR containment is described. The method assumes rotational symmetry of the structure. Time integration is by an explicit method. The quasistatic prestressing operation of the PCRV model is performed by a dynamic relaxation technique. The material model accounts for the crushing and tensile cracking in arbitrary direction in concrete and the elastic-plastic behavior of reinforcing steel. The variation of the concrete tensile cracking and compressive crushing limits with strain rate is taken into account. Relative slip is permitted between the concrete and tendons. Several example solutions are presented and compared with experimental results. These sample problems range from simply supported beams to small scale models of PCRV's. It is shown that the analytical methods correlate quite well with experimental results, although in the vicinity of the failure load the response of the models tend to be quite sensitive to input parameters

  20. Graph visualization for the analysis of the structure and dynamics of extreme-scale supercomputers

    Energy Technology Data Exchange (ETDEWEB)

    Berkbigler, K. P. (Kathryn P.); Bush, B. W. (Brian W.); Davis, Kei,; Hoisie, A. (Adolfy); Smith, S. A. (Steve A.)

    2002-01-01

    We are exploring the development and application of information visualization techniques for the analysis of new extreme-scale supercomputer architectures. Modern supercomputers typically comprise very large clusters of commodity SMPs interconnected by possibly dense and often nonstandard networks. The scale, complexity, and inherent nonlocality of the structure and dynamics of this hardware, and the systems and applications distributed over it, challenge traditional analysis methods. As part of the a la carte team at Los Alamos National Laboratory, who are simulating these advanced architectures, we are exploring advanced visualization techniques and creating tools to provide intuitive exploration, discovery, and analysis of these simulations. This work complements existing and emerging algorithmic analysis tools. Here we gives background on the problem domain, a description of a prototypical computer architecture of interest (on the order of 10,000 processors connected by a quaternary fat-tree network), and presentations of several visualizations of the simulation data that make clear the flow of data in the interconnection network.

  1. A NASTRAN-based computer program for structural dynamic analysis of Horizontal Axis Wind Turbines

    Science.gov (United States)

    Lobitz, Don W.

    1995-05-01

    This paper describes a computer program developed for structural dynamic analysis of horizontal axis wind turbines (HAWT's). It is based on the finite element method through its reliance on NASTRAN for the development of mass, stiffness, and damping matrices of the tower end rotor, which are treated in NASTRAN as separate structures. The tower is modeled in a stationary frame and the rotor in one rotating at a constant angular velocity. The two structures are subsequently joined together (external to NASTRAN) using a time-dependent transformation consistent with the hub configuration. Aerodynamic loads are computed with an established flow model based on strip theory. Aeroelastic effects are included by incorporating the local velocity and twisting deformation of the blade in the load computation. The turbulent nature of the wind, both in space and time, is modeled by adding in stochastic wind increments. The resulting equations of motion are solved in the time domain using the implicit Newmark-Beta integrator. Preliminary comparisons with data from the Boeing/NASA MOD2 HAWT indicate that the code is capable of accurately and efficiently predicting the response of HAWT's driven by turbulent winds.

  2. Sensitivity analysis of asphalt-pavement structure dynamic responses under heavy load

    Directory of Open Access Journals (Sweden)

    ZHANG Lijuan

    2015-04-01

    Full Text Available With the 3-Dimensional finite-element dynamic model,the influence of axis-load,axis-speed,and pavement structure parameters on dynamic performance of pavement structure is studied.The results show that with the increase in load,the dynamic response of pavement is nearly proportional to axis-load and increases noticeably;Axis-speed influences the dynamic response to some extent.With the increase of axis-speed,dynamic response of pavement structure increases firstly.With axis-speed further increasing,dynamic response of pavement structure then decreases gradually.For fatigue failure,the influence of heavy-load with common moving speed is much greater than that of static load.Among the pavement structure parameters,thickness of surface-layer has a significant effect on shear stress and the compression stress at road surface.Subgrade modulus has a significant effect on road surface deflection,tensile stress at the bottom of subbase,and compression-strain at the top of subgrade.

  3. Nonlinear Dynamic Analysis of Telescopic Mechanism for Truss Structure Bridge Inspection Vehicle Under Pedestrian Excitation

    Directory of Open Access Journals (Sweden)

    Wenwen Sui

    Full Text Available Abstract Nonlinear dynamic analysis of an axially moving telescopic mechanism for truss structure bridge inspection vehicle under pedestrian excitation is carried out. A biomechanically inspired inverted-pendulum model is utilized to simplify the pedestrian. The nonlinear equations of motion for the beam-pedestrian system are derived using the Hamilton's principle. The equations are transformed into two ordinary differential equations by applying the Galerkin's method at the first two orders. The solutions to the equations are acquired by using the Newmark-β method associated with the Newton-Raphson method. The time-dependent feature of the eigenfunctions for the two beams are taken into consideration in the solutions. Accordingly, the equations of motion for a simplified system, in which the pedestrian is regarded as moving cart, are given. In the numerical examples, dynamic responses of the telescopic mechanism in eight conditions of different beam-telescoping and pedestrian-moving directions are simulated. Comparisons between the vibrations of the beams under pedestrian excitation and corresponding moving cart are carried out to investigate the influence of the pedestrian excitation on the telescopic mechanism. The results show that the displacement of the telescopic mechanism under pedestrian excitation is smaller than that under moving cart especially when the pedestrian approaches the beams end. Additionally, compared with moving cart, the pedestrian excitation can effectively strengthen the vibration when the beam extension is small or when the pedestrian is close to the beams end.

  4. The dynamic relaxation method in the structural analysis of concrete pressure vessels

    International Nuclear Information System (INIS)

    Davidson, I.; Assis Bastos, M.R. de; Camargo, P.B. de.

    1977-01-01

    The dynamic relaxation method, applied to 3 dimensional concrete structures, especially pressure vessels, is demonstrated. It utilizes the finite difference method and allows the growth of cracks to be followed up to the point of vessel rupture. A FORTRAN IV program is developed, which can also be utilized, with the necessary modifications, for other structure calculations [pt

  5. Structural dynamic analysis for time response of bars and trusses using the generalized finite element method

    Directory of Open Access Journals (Sweden)

    André Jacomel Torii

    Full Text Available The Generalized Finite Element Method (GFEM can be viewed as an extension of the Finite Element Method (FEM where the approximation space is enriched by shape functions appropriately chosen. Many applications of the GFEM can be found in literature, mostly when some information about the solution is known a priori. This paper presents the application of the GFEM to the problem of structural dynamic analysis of bars subject to axial displacements and trusses for the evaluation of the time response of the structure. Since the analytical solution of this problem is composed, in most cases, of a trigonometric series, the enrichment used in this paper is based on sine and cosine functions. Modal Superposition and the Newmark Method are used for the time integration procedure. Five examples are studied and the analytical solution is presented for two of them. The results are compared to the ones obtained with the FEM using linear elements and a Hierarchical Finite Element Method (HFEM using higher order elements.

  6. Reliability analysis of redundant structures, taking into account the dynamic effects of component failures and repair of damaged components

    International Nuclear Information System (INIS)

    Fujita, Munehisa.

    1990-01-01

    The dissertation explains an approach for further development of a method for the calculation of the reliability of redundant, statically and/or dynamically responding structures, taking into account the dynamic load shift in case of brittle fracture of structural components, and quantifying the favourable effects of repairs with regard to overall reliability. The first approach is done by failure tree analysis, which, however, is shown to be an extremely complex and costly method if the repair effects are included in the analysis. Another, simplified model for calculation of extreme loads is presented, which offers the possibility of assessing the impact of repair by means of the Markovian chain model. (orig.) [de

  7. A Massively Parallel Sparse Eigensolver for Structural Dynamics Finite Element Analysis

    Energy Technology Data Exchange (ETDEWEB)

    Day, David M.; Reese, G.M.

    1999-05-01

    Eigenanalysis is a critical component of structural dynamics which is essential for determinating the vibrational response of systems. This effort addresses the development of numerical algorithms associated with scalable eigensolver techniques suitable for use on massively parallel, distributed memory computers that are capable of solving large scale structural dynamics problems. An iterative Lanczos method was determined to be the best choice for the application. Scalability of the eigenproblem depends on scalability of the underlying linear solver. A multi-level solver (FETI) was selected as most promising for this component. Issues relating to heterogeneous materials, mechanisms and multipoint constraints have been examined, and the linear solver algorithm has been developed to incorporate features that result in a scalable, robust algorithm for practical structural dynamics applications. The resulting tools have been demonstrated on large problems representative of a weapon's system.

  8. Methodology for Simulation and Analysis of Complex Adaptive Supply Network Structure and Dynamics Using Information Theory

    Directory of Open Access Journals (Sweden)

    Joshua Rodewald

    2016-10-01

    Full Text Available Supply networks existing today in many industries can behave as complex adaptive systems making them more difficult to analyze and assess. Being able to fully understand both the complex static and dynamic structures of a complex adaptive supply network (CASN are key to being able to make more informed management decisions and prioritize resources and production throughout the network. Previous efforts to model and analyze CASN have been impeded by the complex, dynamic nature of the systems. However, drawing from other complex adaptive systems sciences, information theory provides a model-free methodology removing many of those barriers, especially concerning complex network structure and dynamics. With minimal information about the network nodes, transfer entropy can be used to reverse engineer the network structure while local transfer entropy can be used to analyze the network structure’s dynamics. Both simulated and real-world networks were analyzed using this methodology. Applying the methodology to CASNs allows the practitioner to capitalize on observations from the highly multidisciplinary field of information theory which provides insights into CASN’s self-organization, emergence, stability/instability, and distributed computation. This not only provides managers with a more thorough understanding of a system’s structure and dynamics for management purposes, but also opens up research opportunities into eventual strategies to monitor and manage emergence and adaption within the environment.

  9. Dynamic Data Structures

    DEFF Research Database (Denmark)

    Tsakalidis, Konstantinos

    We study dynamic data structures for different variants of orthogonal range reporting query problems. In particular, we consider (1) the planar orthogonal 3-sided range reporting problem: given a set of points in the plane, report the points that lie within a given 3-sided rectangle with one....... Dynamic problems like the above arise in various applications of network optimization, VLSI layout design, computer graphics and distributed computing. For the first problem, we present dynamic data structures for internal and external memory that support planar orthogonal 3-sided range reporting queries......, and insertions and deletions of points efficiently over an average case sequence of update operations. The external memory data structures find applications in constraint and temporal databases. In particular, we assume that the coordinates of the points are drawn from different probabilistic distributions...

  10. Structural Modeling and Analysis of a Wave Energy Converter Applying Dynamical Substructuring Method

    DEFF Research Database (Denmark)

    Zurkinden, Andrew Stephen; Damkilde, Lars; Gao, Zhen

    2013-01-01

    This paper deals with structural modeling and analysis of a wave energy converter. The device, called Wavestar, is a bottom fixed structure, located in a shallow water environment at the Danish Northwest coast. The analysis is concentrated on a single float and its structural arm which connects...... the WEC to a jackup structure. The wave energy converter is characterized by having an operational and survival mode. The survival mode drastically reduces the exposure to waves and therfore to the wave loads. Structural response analysis of the Wavestar arm is carried out in this study. Due...

  11. Combining protein sequence, structure, and dynamics: A novel approach for functional evolution analysis of PAS domain superfamily.

    Science.gov (United States)

    Dong, Zheng; Zhou, Hongyu; Tao, Peng

    2018-02-01

    PAS domains are widespread in archaea, bacteria, and eukaryota, and play important roles in various functions. In this study, we aim to explore functional evolutionary relationship among proteins in the PAS domain superfamily in view of the sequence-structure-dynamics-function relationship. We collected protein sequences and crystal structure data from RCSB Protein Data Bank of the PAS domain superfamily belonging to three biological functions (nucleotide binding, photoreceptor activity, and transferase activity). Protein sequences were aligned and then used to select sequence-conserved residues and build phylogenetic tree. Three-dimensional structure alignment was also applied to obtain structure-conserved residues. The protein dynamics were analyzed using elastic network model (ENM) and validated by molecular dynamics (MD) simulation. The result showed that the proteins with same function could be grouped by sequence similarity, and proteins in different functional groups displayed statistically significant difference in their vibrational patterns. Interestingly, in all three functional groups, conserved amino acid residues identified by sequence and structure conservation analysis generally have a lower fluctuation than other residues. In addition, the fluctuation of conserved residues in each biological function group was strongly correlated with the corresponding biological function. This research suggested a direct connection in which the protein sequences were related to various functions through structural dynamics. This is a new attempt to delineate functional evolution of proteins using the integrated information of sequence, structure, and dynamics. © 2017 The Protein Society.

  12. Dynamic Analysis of Fluid – Structure Interaction of Axial Fan System

    Directory of Open Access Journals (Sweden)

    Assim Hameed Yousif

    2015-09-01

    Full Text Available Fluid-structure interaction method is performed to predict the dynamic characteristics of axial fan system. A fluid-structure interface physical environment method (monolithic method is used to couple the fluid flow solver with the structural solver. The integration of the three-dimensional Navier-Stokes equations is performed in the time Doman, simultaneously to the integration of the three dimensional structural model. The aerodynamic loads are transfer from the flow to structure and the coupling step is repeated within each time step, until the flow solution and the structural solution have converged to yield a coupled solution of the aeroelastic set of equations. Finite element method is applied to solve numerically the Navier-Stockes equations coupled with the structural equations The first ten eigenvalue (natural frequency, the first ten eigenvector (mode shape and effective stress for each part of a rotor system and complete system assembly are predicted. The validity of the predicted dynamic characteristics of duct fan system was confirmed experimentally by investigating geometrically similar fan system test rig. Good agreement of dynamic characteristics is observed between experimental and numerical results

  13. A Comprehensive Structural Dynamic Analysis Approach for Multi Mission Earth Entry Vehicle (MMEEV) Development

    Science.gov (United States)

    Perino, Scott; Bayandor, Javid; Siddens, Aaron

    2012-01-01

    The anticipated NASA Mars Sample Return Mission (MSR) requires a simple and reliable method in which to return collected Martian samples back to earth for scientific analysis. The Multi-Mission Earth Entry Vehicle (MMEEV) is NASA's proposed solution to this MSR requirement. Key aspects of the MMEEV are its reliable and passive operation, energy absorbing foam-composite structure, and modular impact sphere (IS) design. To aid in the development of an EEV design that can be modified for various missions requirements, two fully parametric finite element models were developed. The first model was developed in an explicit finite element code and was designed to evaluate the impact response of the vehicle and payload during the final stage of the vehicle's return to earth. The second model was developed in an explicit code and was designed to evaluate the static and dynamic structural response of the vehicle during launch and reentry. In contrast to most other FE models, built through a Graphical User Interface (GUI) pre-processor, the current model was developed using a coding technique that allows the analyst to quickly change nearly all aspects of the model including: geometric dimensions, material properties, load and boundary conditions, mesh properties, and analysis controls. Using the developed design tool, a full range of proposed designs can quickly be analyzed numerically and thus the design trade space for the EEV can be fully understood. An engineer can then quickly reach the best design for a specific mission and also adapt and optimize the general design for different missions.

  14. NONSAP, Finite Element Calculation for Nonlinear Static and Dynamic Analysis of Complex Structures

    International Nuclear Information System (INIS)

    Bathe, K.J.; Wilson, E.L.; Iding, R.H.

    1978-01-01

    1 - Description of problem or function: NONSAP is a general finite element program for the nonlinear static and dynamic analysis of complex structures. The program is very flexible and was designed to be extended and modified by the user. In particular the program can easily be modified to use a different formulation of the equations of motions, different time integration operators and other additional options. 2 - Method of solution: The system response is calculated using an incremental solution of the equations of equilibrium with the Wilson theta or Newmark time integration scheme. Before the time integration is carried out, the constant structure matrices, namely the linear effective stiffness matrix, the linear stiffness, mass and damping matrices, whichever is applicable, and the load vectors are assembled and stored on low-speed storage. During the step-by- step solution the linear effective stiffness matrix is updated for the nonlinearities in the system. Therefore, only the nonlinearities are dealt with in the time integration. The program presently contains the following element types: a) three-dimensional truss element; b) two-dimensional plane stress and plane strain element; c) two-dimensional axisymmetric shell or solid element; d) three-dimensional solid element; e) three-dimensional thick shell element. The nonlinearities may be due to large displacements, large strains, and nonlinear material behaviour. The material descriptions presently available are: (for the truss elements) a) linear elastic; b) nonlinear elastic; (for the two-dimensional elements) a) isotropic linear elastic; b) orthotropic linear elastic; c) Mooney-Rivlin material; d) elastic-plastic materials, von Mises or Drucker-Prager yield conditions; e) variable tangent moduli model; f) curve description model (with tension cut-off); (for the three-dimensional elements) a) isotropic linear elastic; b) curve description model. Input data consists of the global coordinates and degrees of

  15. Dynamics of structures

    CERN Document Server

    Paultre, Patrick

    2013-01-01

    This book covers structural dynamics from a theoretical and algorithmic approach. It covers systems with both single and multiple degrees-of-freedom. Numerous case studies are given to provide the reader with a deeper insight into the practicalities of the area, and the solutions to these case studies are given in terms of real-time and frequency in both geometric and modal spaces. Emphasis is also given to the subject of seismic loading. The text is based on many lectures on the subject of structural dynamics given at numerous institutions and thus will be an accessible and practical aid to

  16. Variable-structure approaches analysis, simulation, robust control and estimation of uncertain dynamic processes

    CERN Document Server

    Senkel, Luise

    2016-01-01

    This edited book aims at presenting current research activities in the field of robust variable-structure systems. The scope equally comprises highlighting novel methodological aspects as well as presenting the use of variable-structure techniques in industrial applications including their efficient implementation on hardware for real-time control. The target audience primarily comprises research experts in the field of control theory and nonlinear dynamics but the book may also be beneficial for graduate students.

  17. Dynamic analysis on market structure of China's coal industry

    International Nuclear Information System (INIS)

    Yang, Qing; Zhang, Lei; Wang, Xin

    2017-01-01

    According to industrial organization theory, market structure is a crucial factor to market performance. Based on the VAR model and the data from 1994 to 2014, we revealed the dynamic response route of the market structure to these factors and the change process of contribution rate of these factors to the market structure. It shows that market structure is inertial adjustment; technology advance and industry policy have continuous effects on improvement of market concentration ratio; market size and production scale have sustained negative effects on market concentration ratio; fixed capital has barrier effect, which is mainly the entry barrier effect at the beginning, and then the exit barrier effect continues to play a leading role. Therefore, the government has no need to introduce special policies to encourage merger or expansion on the capacity as enterprises would do it spontaneously; it is necessary to make market access system stricter, to improve exit compensation mechanism and to promote technological innovation; all these policies need dynamic adjustment based on the stages of economic cycle. - Highlights: • The adjustment mechanism of China's coal market structure is revealed. • Technology and industry policy are significant factors to optimize the market structure. • The government need not introduce special policy to encourage merger. • The market access system should be stricter. • Policies strength should be dynamically adjusted based on the economic cycle.

  18. Flexible Multibody Dynamics Finite Element Formulation Applied to Structural Progressive Collapse Analysis

    Directory of Open Access Journals (Sweden)

    Rodolfo André Kuche Sanches

    Full Text Available Abstract This paper presents a two-dimensional frame finite element methodology to deal with flexible multi-body dynamic systems and applies it to building progressive collapse analysis. The proposed methodology employs a frame element with Timoshenko kinematics and the dynamic governing equation is solved based on the stationary potential energy theorem written regarding nodal positions and generalized vectors components instead of displacements and rotations. The bodies are discretized by lose finite elements, which are assembled by Lagrange multipliers in order to make possible dynamical detachment. Due to the absence of rotation, the time integration is carried by classical Newmark algorithm, which reveals to be stable to the position based formulation. The accuracy of the proposed formulation is verified by simple examples and its capabilities regarding progressive collapse analysis is demonstrated in a more complete building analysis.

  19. Dynamic Weighted Data Structures.

    Science.gov (United States)

    1982-06-01

    and Bonnie Hampton, who taught me much more than how to play the cello. Finally, for hours of artistic satisfaction, I thank Johannes Brahms , Ludwig...van "j Beethoven, Igor Stravinsky, Glan-Carlo Menotti, and Johann Sebastian Bach. Dynamic Weighted Data Structures Samuel W. Bent This thesis discusses

  20. Impact of T-RFLP data analysis choices on assessments of microbial community structure and dynamics.

    Science.gov (United States)

    Fredriksson, Nils Johan; Hermansson, Malte; Wilén, Britt-Marie

    2014-11-08

    the uncertainty and ambiguity in alignments of T-RF profiles. Large differences in the outcome of assessments of bacterial community structure and dynamics were observed between different alignment and normalization methods. The results of this study can therefore be of value when considering what methods to use in the analysis of T-RFLP data.

  1. Dynamic Data Structures

    DEFF Research Database (Denmark)

    Kejlberg-Rasmussen, Casper

    statements about our data structure, which are based on the structure of the underlying problem, that we are trying to solve. We can rely on the properties of the invariants when performing queries, and in return we need to ensure that the invariants remain true after we perform updates. When designing data......In this thesis I will address three dynamic data structure problems using the concept of invariants. The first problem is maintaining a dynamically changing set of keys – a dictionary – where the queries we can ask are: does it contain a given key? and what is the preceding (or succeeding) key...... to a given key? The updates we can do are: inserting a new key or deleting a given key. Our dictionary has the working set property, which means that the running time of a query depends on the query distribution. Specifically the time to search for a key depends on when we last searched for it. Our data...

  2. Insights into biological information processing: structural and dynamical analysis of a human protein signalling network

    Energy Technology Data Exchange (ETDEWEB)

    Fuente, Alberto de la; Fotia, Giorgio; Maggio, Fabio; Mancosu, Gianmaria; Pieroni, Enrico [CRS4 Bioinformatica, Parco Tecnologico POLARIS, Ed.1, Loc Piscinamanna, Pula (Italy)], E-mail: alf@crs4.it

    2008-06-06

    We present an investigation on the structural and dynamical properties of a 'human protein signalling network' (HPSN). This biological network is composed of nodes that correspond to proteins and directed edges that represent signal flows. In order to gain insight into the organization of cell information processing this network is analysed taking into account explicitly the edge directions. We explore the topological properties of the HPSN at the global and the local scale, further applying the generating function formalism to provide a suitable comparative model. The relationship between the node degrees and the distribution of signals through the network is characterized using degree correlation profiles. Finally, we analyse the dynamical properties of small sub-graphs showing high correlation between their occurrence and dynamic stability.

  3. Design, analysis, and testing of a hybrid scale structural dynamic model of a Space Station

    Science.gov (United States)

    Gronet, Marc J.; Crawley, Edward F.; Allen, Bradley R.

    1989-01-01

    The impracticality of testing the fully-assembled on-orbit configurations of future large erectable space platforms fosters an increased reliance on other means for verifying predicted structural dynamic performance. One option is scale modeling. This paper discusses the design of a hybrid scale dynamic test model of the Freedom Space Station and its associated suspension system. Hybrid scaling laws are reviewed, followed by scale factor trades, component design examples, and an analytical evaluation of the overall model fidelity. Component and subassembly test results from a six-bay hybrid scale model truss are presented. Potential interactions of gravity and the suspension system with the free-free dynamics of the scale model are investigated. Suspension system design parameters, such as the number, location, mass, and stiffness of the suspension devices are traded to minimize undesirable interactions and form the basis for an overall suspension system concept for the scale model.

  4. Experimental modal analysis and dynamic strain fiber Bragg gratings for structural health monitoring of composite antenna sub-reflector

    Science.gov (United States)

    Panopoulou, A.; Fransen, S.; Gomez-Molinero, V.; Kostopoulos, V.

    2013-09-01

    The objective of this work is to develop a new structural health monitoring system for composite aerospace structures based on dynamic response strain measurements and experimental modal analysis techniques. Fiber Bragg grating (FBG) optical sensors were used for monitoring the dynamic response of the composite structure. The structural dynamic behavior has been numerically simulated and experimentally verified by means of vibration testing. The hypothesis of all vibration tests was that actual damage in composites reduces their stiffness and produces an eigenfrequency shifting to lower values in the same sense as mass increase produces. Thus, damage was simulated by slightly varying locally the mass of the structure at different zones. The correlation between the simulated damage and the loss of stiffness was analytically defined. Experimental modal analysis based on the strain responses was conducted and the extracted strain mode shapes were the input for the damage detection expert system. A feed-forward back propagation neural network was the core of the damage detection system. The features-input to the neural network consisted of the strain mode shapes, extracted from the experimental modal analysis. Dedicated training and validation activities were carried out based on the experimental results. The system showed high reliability, confirmed by the ability of the neural network to recognize the size and the position of damage on the structure. The experiments were performed on a real structure i.e. a lightweight antenna sub-reflector, manufactured and tested at EADS CASA ESPACIO. An integrated FBG sensor network, based on the advantage of multiplexing, was mounted on the structure with optimum topology. Numerical simulation was used as a support tool at all the steps of the work. Potential applications for the proposed system are during ground qualification extensive tests of space structures and during the mission as modal analysis tool on board, being able

  5. Dynamic structural analysis of the TPSG4 & TPSG6 beam diluters

    CERN Document Server

    Massidda, L; Kadi, Y; Balhan, B

    2005-01-01

    In this report we present the technical specification for the numerical model and the study of the dynamic structural behaviour of the beam diluter elements (TPSG4 & 6) protecting the extraction septum magnets (MSE & MST) in the event of an asynchronous firing of the extraction kickers (MKE). The deposited energy densities, estimated by the high-energy particle transport code FLUKA, were converted to internal heat generation rates according to the time dependence of the extracted beam. The transient response to this thermal load was obtained by solving the power deposition and structural deformation problem by the spectral-element code ELSE.

  6. Molecular dynamics simulations of matrix deposition. III. Site structure analysis for porphycene in argon and xenon.

    Science.gov (United States)

    Kyrychenko, Alexander; Waluk, Jacek

    2005-08-08

    Porphycene (1) and porphyrin (2), two constitutional isomers, reveal completely different electronic spectral patterns in argon and xenon matrices. For the former the spectra recorded in the two solidified gases resemble each other, whereas for the latter they are completely different. This difference can be rationalized by molecular-dynamics simulations of the structure of the microenvironment carried out for the two chromophores embedded in argon and xenon hosts. For 1, the structure of the main substitutional site is the same for Ar and Xe and consists of a hexagonal cavity obtained by removing seven host atoms from the [111] crystallographic plane. An analogous structure is obtained for 2 in xenon. However, in argon the porphyrin chromophore environment is shared between several different sites, with the number of replaced host atoms ranging from seven to ten. These results demonstrate that a relatively minor structural alternation may lead to major changes in the spectral pattern of molecules embedded in rare-gas cryogenic matrices.

  7. Secondary Structure Analysis of Native Cellulose by Molecular Dynamics Simulations with Coarse Grained Model

    Science.gov (United States)

    Wu, Shuai; Zhan, Hai-yi; Wang, Hong-ming; Ju, Yan

    2012-04-01

    The secondary structure of different Iβ cellulose was analyzed by a molecular dynamics simulation with MARTINI coarse-grained force field, where each chain of the cellulose includes 40 D-glucoses units. Calculation gives a satisfied description about the secondary structure of the cellulose. As the chain number increasing, the cellulose becomes the form of a helix, with the diameter of screw growing and spiral rising. Interestingly, the celluloses with chain number N 4 of 6, 24 and 36 do show right-hand twisting. On the contrast, the celluloses with N 8 of 12, 16 chains are left-hand twisting. These simulations indicate that the cellulose with chain number larger than 36 will break down to two parts. Besides, the result indicates that 36-chains cellulose model is the most stable among all models. Furthermore, the Lennard-Jones potential determines the secondary structure. In addition, an equation was set up to analyze the twisting structure.

  8. Structural system identification: Structural dynamics model validation

    Energy Technology Data Exchange (ETDEWEB)

    Red-Horse, J.R.

    1997-04-01

    Structural system identification is concerned with the development of systematic procedures and tools for developing predictive analytical models based on a physical structure`s dynamic response characteristics. It is a multidisciplinary process that involves the ability (1) to define high fidelity physics-based analysis models, (2) to acquire accurate test-derived information for physical specimens using diagnostic experiments, (3) to validate the numerical simulation model by reconciling differences that inevitably exist between the analysis model and the experimental data, and (4) to quantify uncertainties in the final system models and subsequent numerical simulations. The goal of this project was to develop structural system identification techniques and software suitable for both research and production applications in code and model validation.

  9. Dynamic structural analysis of a head assembly for a large loop-type LMFBR

    International Nuclear Information System (INIS)

    Kulak, R.F.; Fiala, C.

    1984-01-01

    An investigation is presented on the dynamic structural response of the primary vessel's head closure to slug impact loadings generated from a 1000 MJ source term. The reference reactor considered was designed in a loop configuration. The head structure consisted of a deck and a triple rotatable plug assembly. Two designs were considered for the deck structure: a reference design and an alternate design. The reference deck was designed as a single flat annular plate. For the alternate design, the deck plate was reinforced by adding an extender cylinder with a flange and flanged webs between the deck-plate and cylinder. The investigation showed that the reference design cannot maintain containment integrity when subjected to slug loading generated by a 1000 MJ source term. It was determined that the head deformed excessively

  10. Fully three-dimensional analysis of high-speed train-track-soil-structure dynamic interaction

    Science.gov (United States)

    Galvín, P.; Romero, A.; Domínguez, J.

    2010-11-01

    In this paper, a general and fully three dimensional multi-body-finite element-boundary element model, formulated in the time domain to predict vibrations due to train passage at the vehicle, the track and the free field, is presented. The vehicle is modelled as a multi-body system and, therefore, the quasi-static and the dynamic excitation mechanisms due to train passage can be considered. The track is modelled using finite elements. The soil is considered as a homogeneous half-space by the boundary element method. This methodology could be used to take into account local soil discontinuities, underground constructions such as underpasses, and coupling with nearby structures that break the uniformity of the geometry along the track line. The nonlinear behaviour of the structures could be also considered. In the present paper, in order to test the model, vibrations induced by high-speed train passage are evaluated for a ballasted track. The quasi-static and dynamic load components are studied and the influence of the suspended mass on the vertical loads is analyzed. The numerical model is validated by comparison with experimental records from two HST lines. Finally, the dynamic behaviour of a transition zone between a ballast track and a slab track is analyzed and the obtained results from the proposed model are compared with those obtained from a model with invariant geometry with respect to the track direction.

  11. Structural dynamic modification using additive damping

    Indian Academy of Sciences (India)

    In order to control dynamic response in structures and machines, modofications using additive viscoelastic damping materials are highlighted. The techniques described for analysis include analytical methods for structural elements, FEM and perturbation methods for reanalysis or structural dynamic modifications for ...

  12. Examining the Dynamic Structure of Daily Internalizing and Externalizing Behavior at Multiple Levels of Analysis

    Directory of Open Access Journals (Sweden)

    Aidan G.C. Wright

    2015-12-01

    Full Text Available Psychiatric diagnostic covariation suggests that the underlying structure of psychopathology is not one of circumscribed disorders. Quantitative modeling of individual differences in diagnostic patterns has uncovered several broad domains of mental disorder liability, of which the Internalizing and Externalizing spectra have garnered the greatest support. These dimensions have generally been estimated from lifetime or past-year comorbidity patters, which are distal from the covariation of symptoms and maladaptive behavior that ebb and flow in daily life. In this study, structural models are applied to daily diary data (Median = 94 days of maladaptive behaviors collected from a sample (N = 101 of individuals diagnosed with personality disorders. Using multilevel and unified structural equation modeling, between-person, within-person, and person-specific structures were estimated from 16 behaviors that are encompassed by the Internalizing and Externalizing spectra. At the between-person level (i.e., individual differences in average endorsement across days we found support for a two-factor Internalizing-Externalizing model, which exhibits significant associations with corresponding diagnostic spectra. At the within-person level (i.e., dynamic covariation among daily behavior pooled across individuals we found support for a more differentiated, four-factor, Negative Affect-Detachment-Hostility-Impulsivity structure. Finally, we demonstrate that the person-specific structures of associations between these four domains are highly idiosyncratic.

  13. Probabilistic Sensitivity Analysis for Launch Vehicles with Varying Payloads and Adapters for Structural Dynamics and Loads

    Science.gov (United States)

    McGhee, David S.; Peck, Jeff A.; McDonald, Emmett J.

    2012-01-01

    This paper examines Probabilistic Sensitivity Analysis (PSA) methods and tools in an effort to understand their utility in vehicle loads and dynamic analysis. Specifically, this study addresses how these methods may be used to establish limits on payload mass and cg location and requirements on adaptor stiffnesses while maintaining vehicle loads and frequencies within established bounds. To this end, PSA methods and tools are applied to a realistic, but manageable, integrated launch vehicle analysis where payload and payload adaptor parameters are modeled as random variables. This analysis is used to study both Regional Response PSA (RRPSA) and Global Response PSA (GRPSA) methods, with a primary focus on sampling based techniques. For contrast, some MPP based approaches are also examined.

  14. A Dynamic Analysis of Capital Structure Determinants. Empirical Results for Romanian Capital Market

    Directory of Open Access Journals (Sweden)

    Mihaela Dragota

    2008-04-01

    Full Text Available The analysis of capital structure and its determinants represents an useful approach for the Romanian and foreign investors and for the companies, at the same time. The main conclusion for capital structure analysis was that Romanian listed companies sustained their assets, in this order, on equity, commercial debt and, finally, on financial debt. The four variables used in the regression model are significant. The pecking order theory seemed to be more appropriate for the Romanian capital market, but the signalling theory was not entirely rejected.

  15. Analysis of Decomposition for Structure I Methane Hydrate by Molecular Dynamics Simulation

    Science.gov (United States)

    Wei, Na; Sun, Wan-Tong; Meng, Ying-Feng; Liu, An-Qi; Zhou, Shou-Wei; Guo, Ping; Fu, Qiang; Lv, Xin

    2018-05-01

    Under multi-nodes of temperatures and pressures, microscopic decomposition mechanisms of structure I methane hydrate in contact with bulk water molecules have been studied through LAMMPS software by molecular dynamics simulation. Simulation system consists of 482 methane molecules in hydrate and 3027 randomly distributed bulk water molecules. Through analyses of simulation results, decomposition number of hydrate cages, density of methane molecules, radial distribution function for oxygen atoms, mean square displacement and coefficient of diffusion of methane molecules have been studied. A significant result shows that structure I methane hydrate decomposes from hydrate-bulk water interface to hydrate interior. As temperature rises and pressure drops, the stabilization of hydrate will weaken, decomposition extent will go deep, and mean square displacement and coefficient of diffusion of methane molecules will increase. The studies can provide important meanings for the microscopic decomposition mechanisms analyses of methane hydrate.

  16. Resolution of structural heterogeneity in dynamic crystallography.

    Science.gov (United States)

    Ren, Zhong; Chan, Peter W Y; Moffat, Keith; Pai, Emil F; Royer, William E; Šrajer, Vukica; Yang, Xiaojing

    2013-06-01

    Dynamic behavior of proteins is critical to their function. X-ray crystallography, a powerful yet mostly static technique, faces inherent challenges in acquiring dynamic information despite decades of effort. Dynamic `structural changes' are often indirectly inferred from `structural differences' by comparing related static structures. In contrast, the direct observation of dynamic structural changes requires the initiation of a biochemical reaction or process in a crystal. Both the direct and the indirect approaches share a common challenge in analysis: how to interpret the structural heterogeneity intrinsic to all dynamic processes. This paper presents a real-space approach to this challenge, in which a suite of analytical methods and tools to identify and refine the mixed structural species present in multiple crystallographic data sets have been developed. These methods have been applied to representative scenarios in dynamic crystallography, and reveal structural information that is otherwise difficult to interpret or inaccessible using conventional methods.

  17. Dynamic Soil-Structure-Interaction

    DEFF Research Database (Denmark)

    Kellezi, Lindita

    1998-01-01

    The aim of this thesis is to investigate and develop alternative methods of analyzing problems in dynamic soil-structure-interaction. The main focus is the major difficulty posed by such an analysis - the phenomenon of waves which radiate outward from the excited structures towards infinity...... is formulated based on the one-dimensional wave propagation in a cone model resulting in the amplitude decay of inversely proportion to the distance travelled. So the transmitting boundary for body waves is constructed in analogy to springs and dashpots connecting the boundary nodes to a rigid base...... represents an attempt to construct a local stiffness for the unbounded soil domain....

  18. Quantitative analysis of mechanisms that govern red blood cell age structure and dynamics during anaemia.

    Science.gov (United States)

    Savill, Nicholas J; Chadwick, William; Reece, Sarah E

    2009-06-01

    Mathematical modelling has proven an important tool in elucidating and quantifying mechanisms that govern the age structure and population dynamics of red blood cells (RBCs). Here we synthesise ideas from previous experimental data and the mathematical modelling literature with new data in order to test hypotheses and generate new predictions about these mechanisms. The result is a set of competing hypotheses about three intrinsic mechanisms: the feedback from circulating RBC concentration to production rate of immature RBCs (reticulocytes) in bone marrow, the release of reticulocytes from bone marrow into the circulation, and their subsequent ageing and clearance. In addition we examine two mechanisms specific to our experimental system: the effect of phenylhydrazine (PHZ) and blood sampling on RBC dynamics. We performed a set of experiments to quantify the dynamics of reticulocyte proportion, RBC concentration, and erythropoietin concentration in PHZ-induced anaemic mice. By quantifying experimental error we are able to fit and assess each hypothesis against our data and recover parameter estimates using Markov chain Monte Carlo based Bayesian inference. We find that, under normal conditions, about 3% of reticulocytes are released early from bone marrow and upon maturation all cells are released immediately. In the circulation, RBCs undergo random clearance but have a maximum lifespan of about 50 days. Under anaemic conditions reticulocyte production rate is linearly correlated with the difference between normal and anaemic RBC concentrations, and their release rate is exponentially correlated with the same. PHZ appears to age rather than kill RBCs, and younger RBCs are affected more than older RBCs. Blood sampling caused short aperiodic spikes in the proportion of reticulocytes which appear to have a different developmental pathway than normal reticulocytes. We also provide evidence of large diurnal oscillations in serum erythropoietin levels during anaemia.

  19. Complex dynamics analysis of impulsively coupled Duffing oscillators with ring structure

    Science.gov (United States)

    Jiang, Hai-Bo; Zhang, Li-Ping; Yu, Jian-Jiang

    2015-02-01

    Impulsively coupled systems are high-dimensional non-smooth systems that can exhibit rich and complex dynamics. This paper studies the complex dynamics of a non-smooth system which is unidirectionally impulsively coupled by three Duffing oscillators in a ring structure. By constructing a proper Poincaré map of the non-smooth system, an analytical expression of the Jacobian matrix of Poincaré map is given. Two-parameter Hopf bifurcation sets are obtained by combining the shooting method and the Runge-Kutta method. When the period is fixed and the coupling strength changes, the system undergoes stable, periodic, quasi-periodic, and hyper-chaotic solutions, etc. Floquet theory is used to study the stability of the periodic solutions of the system and their bifurcations. Project supported by the National Natural Science Foundation of China (Grant Nos. 11402224, 11202180, 61273106, and 11171290), the Qing Lan Project of the Jiangsu Higher Educational Institutions of China, and the Jiangsu Overseas Research and Training Program for University Prominent Young and Middle-aged Teachers and Presidents.

  20. A modified precise integration method for transient dynamic analysis in structural systems with multiple damping models

    Science.gov (United States)

    Ding, Zhe; Li, Li; Hu, Yujin

    2018-01-01

    Sophisticated engineering systems are usually assembled by subcomponents with significantly different levels of energy dissipation. Therefore, these damping systems often contain multiple damping models and lead to great difficulties in analyzing. This paper aims at developing a time integration method for structural systems with multiple damping models. The dynamical system is first represented by a generally damped model. Based on this, a new extended state-space method for the damped system is derived. A modified precise integration method with Gauss-Legendre quadrature is then proposed. The numerical stability and accuracy of the proposed integration method are discussed in detail. It is verified that the method is conditionally stable and has inherent algorithmic damping, period error and amplitude decay. Numerical examples are provided to assess the performance of the proposed method compared with other methods. It is demonstrated that the method is more accurate than other methods with rather good efficiency and the stable condition is easy to be satisfied in practice.

  1. Nonlinear static and dynamic analysis of beam structures using fully intrinsic equations

    Science.gov (United States)

    Sotoudeh, Zahra

    2011-07-01

    Beams are structural members with one dimension much larger than the other two. Examples of beams include propeller blades, helicopter rotor blades, and high aspect-ratio aircraft wings in aerospace engineering; shafts and wind turbine blades in mechanical engineering; towers, highways and bridges in civil engineering; and DNA modeling in biomedical engineering. Beam analysis includes two sets of equations: a generally linear two-dimensional problem over the cross-sectional plane and a nonlinear, global one-dimensional analysis. This research work deals with a relatively new set of equations for one-dimensional beam analysis, namely the so-called fully intrinsic equations. Fully intrinsic equations comprise a set of geometrically exact, nonlinear, first-order partial differential equations that is suitable for analyzing initially curved and twisted anisotropic beams. A fully intrinsic formulation is devoid of displacement and rotation variables, making it especially attractive because of the absence of singularities, infinite-degree nonlinearities, and other undesirable features associated with finite rotation variables. In spite of the advantages of these equations, using them with certain boundary conditions presents significant challenges. This research work will take a broad look at these challenges of modeling various boundary conditions when using the fully intrinsic equations. Hopefully it will clear the path for wider and easier use of the fully intrinsic equations in future research. This work also includes application of fully intrinsic equations in structural analysis of joined-wing aircraft, different rotor blade configuration and LCO analysis of HALE aircraft.

  2. Molecular dynamics simulations and structure-based network analysis reveal structural and functional aspects of G-protein coupled receptor dimer interactions

    Science.gov (United States)

    Baltoumas, Fotis A.; Theodoropoulou, Margarita C.; Hamodrakas, Stavros J.

    2016-06-01

    A significant amount of experimental evidence suggests that G-protein coupled receptors (GPCRs) do not act exclusively as monomers but also form biologically relevant dimers and oligomers. However, the structural determinants, stoichiometry and functional importance of GPCR oligomerization remain topics of intense speculation. In this study we attempted to evaluate the nature and dynamics of GPCR oligomeric interactions. A representative set of GPCR homodimers were studied through Coarse-Grained Molecular Dynamics simulations, combined with interface analysis and concepts from network theory for the construction and analysis of dynamic structural networks. Our results highlight important structural determinants that seem to govern receptor dimer interactions. A conserved dynamic behavior was observed among different GPCRs, including receptors belonging in different GPCR classes. Specific GPCR regions were highlighted as the core of the interfaces. Finally, correlations of motion were observed between parts of the dimer interface and GPCR segments participating in ligand binding and receptor activation, suggesting the existence of mechanisms through which dimer formation may affect GPCR function. The results of this study can be used to drive experiments aimed at exploring GPCR oligomerization, as well as in the study of transmembrane protein-protein interactions in general.

  3. Nastran-based software for the structural dynamic analysis of vertical and horizontal axis wind turbines

    Energy Technology Data Exchange (ETDEWEB)

    Lobitz, D.W.

    1984-01-01

    Throughout the vertical axis wind turbine program at Sandia a significant effort has gone into developing finite element tools for predicting structural dynamic rotor response. Instead of creating new finite element packages, appropriate modifications to the NASTRAN code were made for the development of these tools. With this approach duplication of such things as input and output coding, finite element processors and solution algorithms is avoided. Although some DMAP programming is required, most of the changes are effected through the use of NASTRAN's direct matrix input option. These matrix alterations are necessary to model a structure moving in a rotating frame. To date, tools which predict natural frequencies and mode shapes, and the forced vibration frequency response of the rotating turbine have been developed. More recently, for horizontal axis rotors, a capability has been created for computing transient behavior as the roto turns in the wind. In this case, a solution procedure external to NASTRAN had to be employed in order to correctly attach the rotor hub which moves in the rotating frame to the tower which is modeled in a fixed frame. In all cases these tools have been compared with experimental data collected from various wind turbines and, for each, very satisfactory agreement has been achieved.

  4. Structural dynamic modifications via models

    Indian Academy of Sciences (India)

    of structural dynamic optimization techniques. A review of structural optimization in vibratory environments is given by Rao (1989). 2. SDM techniques. SDM methods may be broadly divided into two groups. Those which employ a model of the structure and those that use dynamic test data directly. The model used by the ...

  5. Mass drivers. 2: Structural dynamics

    Science.gov (United States)

    Arnold, W.; Bowen, S.; Fine, K.; Kaplan, D.; Kolm, M.; Kolm, H.; Newman, J.; Oneill, G. K.; Snow, W.

    1979-01-01

    Various structural and dynamical problems related to both small-scale forces between the drive coils and within the bucket structure as well as the overall combined large-scale dynamical interaction of the bucket stream and MDRE (Mass Drive Reaction Engine) structure are examined. The large-scale dynamics appear weakly stable. Finally, MDRE operation in an inverse-square-law gravitational field is discussed and the required curved shape of the guideway is computed.

  6. STRENGHT AND DYNAMIC ANALYSIS OF A STRUCTURAL NODE LIMITING THE MULTI-OUTPUT GEAR MECHANISM

    Directory of Open Access Journals (Sweden)

    Mária Kačalová

    2017-10-01

    Full Text Available The rapidly advancing technological development leads to designing and researching a new multi- output gear mechanism. The investigated new double-output gear mechanism has two output coaxial shafts located against the input shaft on the other side of the gearbox. The gear mechanism achieves high gear ratios. Its limiting structural node is the output stage, to which the gears belong. The problem is addressed through the analysis of the stress resistance of tooth flanks in contact and bending. The content of the paper is a comparison of analytical computations with the modal analysis on the model. We expect that new findings will be beneficial for further optimization of the gear mechanism.

  7. Analysis of the structure and dynamics of the stellar tails of open star clusters

    Science.gov (United States)

    Chumak, Ya. O.; Rastorguev, A. S.

    2006-03-01

    We have analyzed the formation, structure, and dynamical evolution of the population of stars that escaped from open clusters by numerical simulations using S. Aarseth’s modified NBODY6 code. In the Galactic tidal field, the population of stars that escaped from a cluster is shown to be elongated along the orbit of the cluster symmetrically about its core in the form of stellar tails of increasing sizes. We analyze the parameters of stellar tails as a function of such initial simulation conditions as the number of stars, the cluster density, the eccentricity of the Galactic cluster orbit in the plane of the Galactic disk, and the z velocity component. As a result, we constructed a grid of model stellar tails of open clusters. The grid includes such time-dependent parameters of the stellar tails as the length, the cross section, the number of stars, the velocity distribution, etc. Our simulations allow us to clarify the origin of moving clusters and stellar streams and to assess the role of star clusters in forming the stellar velocity field in the solar neighborhood.

  8. Sierra Structural Dynamics Theory Manual

    Energy Technology Data Exchange (ETDEWEB)

    Reese, Garth M. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)

    2015-10-19

    Sierra/SD provides a massively parallel implementation of structural dynamics finite element analysis, required for high fidelity, validated models used in modal, vibration, static and shock analysis of structural systems. This manual describes the theory behind many of the constructs in Sierra/SD. For a more detailed description of how to use Sierra/SD , we refer the reader to Sierra/SD, User's Notes . Many of the constructs in Sierra/SD are pulled directly from published material. Where possible, these materials are referenced herein. However, certain functions in Sierra/SD are specific to our implementation. We try to be far more complete in those areas. The theory manual was developed from several sources including general notes, a programmer notes manual, the user's notes and of course the material in the open literature. This page intentionally left blank.

  9. Dynamic analysis of 2-D and 3-D quasi-brittle solids and structures by D/BEM

    Directory of Open Access Journals (Sweden)

    Hatzigeorgiou George D.

    2002-01-01

    Full Text Available A general boundary element methodology for the dynamic analysis of 2-D and 3-D solids and structures exhibiting quasi-brittle material behavior is presented. Inelasticity is modeled with the aid of the elastic damage theory. Strain rate and cyclic loading effects are also considered. The integral formulation of the problem employs the electrostatic fundamental solution and thus both surface and volume integrals due to inertia and inelasticity are created. Consequently the discrimination involves both the surface and the interior of the body. The singular integrals are evaluated by advanced numerical integration techniques, while Humboldt's step-by-step time integration scheme is used to obtain the dynamic response. Numerical examples are presented to illustrate the proposed method and demonstrate its accuracy and potential. .

  10. Modal Analysis of a Lightweight STRUCTURE—INVESTIGATION of the Effects of the Supports on the Structural Dynamics

    Science.gov (United States)

    Munsi, A. S. M. Y.; Waddell, A. J.; Walker, C. A.

    2002-03-01

    This study grew out of the use of vibration to modify welding stresses, and the corresponding need to understand the modal vibration properties of the test structures. Supporting the structure is a practical problem in experimental modal analysis. In this study the effect of the supports on the dynamic properties of a lightweight structure were investigated. Thick rubber bungee supports and thin elastic band supports were used in the investigation. The effect of the position of the supports was found to be insignificant if a proper type of support is used. It was observed that with the thick bungees the modes become invisible or obscure on the frequency response function (FRF) curves. On the other hand, the thin elastic band supports provide very clear FRF curves and hence clear mode shapes. It has been suggested that the bungees should be chosen considering the weight of the structure and the requirement of the vibration amplitude in the modal analysis and/or in the subsequent treatments. The position of the bungees should be chosen at the node points of a particular mode of the structure to reduce the support effects further.

  11. Analysis of the Nonlinear Static and Dynamic Behavior of Offshore Structures

    KAUST Repository

    Alfosail, Feras

    2015-07-01

    Understanding static and dynamic nonlinear behavior of pipes and risers is crucial for the design aspects in offshore engineering fields. In this work, we examine two nonlinear problems in offshore engineering field: vortex Induced vibration of straight horizontal pipes, and boundary layer static solution of inclined risers. In the first study, we analyze the effect of the internal velocity of straight horizontal pipe and obtain the vortex induced vibration forces via coupling the pipe equation of motion with the recently modified Van Der Pol oscillator governing the lift coefficient. Our numerical results are obtained for two different pipe configurations: hinged-hinged, and clamped- clamped. The results show that the internal velocity reduces the vibration and the oscillation amplitudes. Also, it is shown that the clamped-clamped pipe configuration offers a wider range of internal velocities before buckling instability occurs. The results also demonstrate the effect of the end condition on the amplitudes of vibration. In the second study, we develop a boundary layer perturbation static solution to govern and simulate the static behavior of inclined risers. In the boundary layer analysis, we take in consideration the effects of the axial stretch, applied tension, and internal velocity. Our numerical simulation results show good agreement with the exact solutions for special cases. In addition, our developed method overcomes the mathematical and numerical limitations of the previous methods used before.

  12. Dynamic Analysis of AP1000 Shield Building Considering Fluid and Structure Interaction Effects

    Directory of Open Access Journals (Sweden)

    Qiang Xu

    2016-02-01

    Full Text Available The shield building of AP1000 was designed to protect the steel containment vessel of the nuclear reactor. Therefore, the safety and integrity must be ensured during the plant life in any conditions such as an earthquake. The aim of this paper is to study the effect of water in the water tank on the response of the AP1000 shield building when subjected to three-dimensional seismic ground acceleration. The smoothed particle hydrodynamics method (SPH and finite element method (FEM coupling method is used to numerically simulate the fluid and structure interaction (FSI between water in the water tank and the AP1000 shield building. Then the grid convergence of FEM and SPH for the AP1000 shield building is analyzed. Next the modal analysis of the AP1000 shield building with various water levels (WLs in the water tank is taken. Meanwhile, the pressure due to sloshing and oscillation of the water in the gravity drain water tank is studied. The influences of the height of water in the water tank on the time history of acceleration of the AP1000 shield building are discussed, as well as the distributions of amplification, acceleration, displacement, and stresses of the AP1000 shield building. Research on the relationship between the WLs in the water tank and the response spectrums of the structure are also taken. The results show that the high WL in the water tank can limit the vibration of the AP1000 shield building and can more efficiently dissipate the kinetic energy of the AP1000 shield building by fluid-structure interaction.

  13. Analysis of structure and dynamics of superfine polyhydroxybutyrate fibers for targeted drug delivery

    Science.gov (United States)

    Olkhov, A.; Kucherenko, E.; Pantyukhov, P.; Zykova, A.; Karpova, S.; Iordanskii, A.

    2017-02-01

    Creation of polymer matrix systems for targeted drug delivery into a living organism is a challenging problem of modern treatment of various diseases and injuries. Poly-3-hydroxybutyrate (PHB) is commonly used for development of therapeutic systems. The aim of this article is to examine the changes in structure and morphology of fibers in presence of dipyridamole (DPD) as model drug for controlled release. It was found that addition of dipyridamole led to disappearance of spindle-shaped nodules on fibers of PHB in comparison with pure PHB. The research of thermophysical parameters showed that specific melting enthalpy (and the degree of crystallinity) of PHB fibers increased with the addition of DPD. With the increasing of DPD content in PHB fibers, more perfect and equilibrium crystal structure was formed. According to analysis of intercrystalline regions of PHB fibers, it was found that as the crystallinity of PHB in intergranular regions rose, the corresponding decrease of radical rotation speed was observed. It was concluded that fibers of PHB can be used for creating therapeutic systems for targeted and prolonged drug delivery.

  14. Fluid dynamic transient analysis

    International Nuclear Information System (INIS)

    Vilhena Reigosa, R. de

    1992-01-01

    This paper describes the methodology adopted at NUCLEN for the fluid dynamic analyses for ANGRA 2. The fluid dynamic analysis allows, through computer codes to simulate and quantify the loads resulting from fluid dynamic transients caused by postulated ruptures or operational transients, in the piping of the safety systems and of the important operational systems. (author)

  15. Static and dynamic structural-sensitivity derivative calculations in the finite-element-based Engineering Analysis Language (EAL) system

    Science.gov (United States)

    Camarda, C. J.; Adelman, H. M.

    1984-01-01

    The implementation of static and dynamic structural-sensitivity derivative calculations in a general purpose, finite-element computer program denoted the Engineering Analysis Language (EAL) System is described. Derivatives are calculated with respect to structural parameters, specifically, member sectional properties including thicknesses, cross-sectional areas, and moments of inertia. Derivatives are obtained for displacements, stresses, vibration frequencies and mode shapes, and buckling loads and mode shapes. Three methods for calculating derivatives are implemented (analytical, semianalytical, and finite differences), and comparisons of computer time and accuracy are made. Results are presented for four examples: a swept wing, a box beam, a stiffened cylinder with a cutout, and a space radiometer-antenna truss.

  16. Rigid Finite Element Method in Analysis of Dynamics of Offshore Structures

    CERN Document Server

    Wittbrodt, Edmund; Maczyński, Andrzej; Wojciech, Stanisław

    2013-01-01

    This book describes new methods developed for modelling dynamics of machines commonly used in the offshore industry. These methods are based both on the rigid finite element method, used for the description of link deformations, and on homogeneous transformations and joint coordinates, which is applied to the modelling of multibody system dynamics. In this monograph, the bases of the rigid finite element method  and homogeneous transformations are introduced. Selected models for modelling dynamics of offshore devices are then verified both by using commercial software, based on the finite element method, as well as by using additional methods. Examples of mathematical models of offshore machines, such as a gantry crane for Blowout-Preventer (BOP) valve block transportation, a pedestal crane with shock absorber, and pipe laying machinery are presented. Selected problems of control in offshore machinery as well as dynamic optimization in device control are also discussed. Additionally, numerical simulations of...

  17. Structural analysis of prolyl oligopeptidases using molecular docking and dynamics: insights into conformational changes and ligand binding.

    Directory of Open Access Journals (Sweden)

    Swati Kaushik

    Full Text Available Prolyl oligopeptidase (POP is considered as an important pharmaceutical target for the treatment of numerous diseases. Despite enormous studies on various aspects of POPs structure and function still some of the questions are intriguing like conformational dynamics of the protein and interplay between ligand entry/egress. Here, we have used molecular modeling and docking based approaches to unravel questions like differences in ligand binding affinities in three POP species (porcine, human and A. thaliana. Despite high sequence and structural similarity, they possess different affinities for the ligands. Interestingly, human POP was found to be more specific, selective and incapable of binding to a few planar ligands which showed extrapolation of porcine POP in human context is more complicated. Possible routes for substrate entry and product egress were also investigated by detailed analyses of molecular dynamics (MD simulations for the three proteins. Trajectory analysis of bound and unbound forms of three species showed differences in conformational dynamics, especially variations in β-propeller pore size, which was found to be hidden by five lysine residues present on blades one and seven. During simulation, β-propeller pore size was increased by ∼2 Å in porcine ligand-bound form which might act as a passage for smaller product movement as free energy barrier was reduced, while there were no significant changes in human and A. thaliana POPs. We also suggest that these differences in pore size could lead to fundamental differences in mode of product egress among three species. This analysis also showed some functionally important residues which can be used further for in vitro mutagenesis and inhibitor design. This study can help us in better understanding of the etiology of POPs in several neurodegenerative diseases.

  18. The Shock and Vibration Bulletin. Part 2. Model Test and Analysis, Testing Techniques, Machinery Dynamics, Isolation and Damping, Structural Dynamics

    Science.gov (United States)

    1986-08-01

    jBfr 5? JOR JS T SIONAL/lBRATIONjerF^EAR-RANCHED PROPULSION.gVSTEMS j... 117 / H.F. Tavares, Cepstrum Engenharia Ltda., Rio de Janeiro, Brazil and V...GAUGE" FOR STRUCTURAL ASSESSMENT T. Krauthammer, Department ot Civil and Mineral Engineering, University of Minnesota, Minneapolis, MN ACTIVE ONE...ACCEPTANCE TEST SPECIFICATIONS FOR BLAST-RESISTANT WINDOWS G.E. Meyers, Naval Civil Engineering Laboratory, Port Hueneme, CA Shock Testin» and

  19. Mass Spectrometry-Based Proteomics for the Analysis of Chromatin Structure and Dynamics

    Directory of Open Access Journals (Sweden)

    Monica Soldi

    2013-03-01

    Full Text Available Chromatin is a highly structured nucleoprotein complex made of histone proteins and DNA that controls nearly all DNA-dependent processes. Chromatin plasticity is regulated by different associated proteins, post-translational modifications on histones (hPTMs and DNA methylation, which act in a concerted manner to enforce a specific “chromatin landscape”, with a regulatory effect on gene expression. Mass Spectrometry (MS has emerged as a powerful analytical strategy to detect histone PTMs, revealing interplays between neighbouring PTMs and enabling screens for their readers in a comprehensive and quantitative fashion. Here we provide an overview of the recent achievements of state-of-the-art mass spectrometry-based proteomics for the detailed qualitative and quantitative characterization of histone post-translational modifications, histone variants, and global interactomes at specific chromatin regions. This synopsis emphasizes how the advances in high resolution MS, from “Bottom Up” to “Top Down” analysis, together with the uptake of quantitative proteomics methods by chromatin biologists, have made MS a well-established method in the epigenetics field, enabling the acquisition of original information, highly complementary to that offered by more conventional, antibody-based, assays.

  20. Structural analysis and evidence for dynamic emergence of Bacillus anthracis S-layer networks.

    Science.gov (United States)

    Couture-Tosi, Evelyne; Delacroix, Hervé; Mignot, Tâm; Mesnage, Stéphane; Chami, Mohamed; Fouet, Agnès; Mosser, Gervaise

    2002-12-01

    Surface layers (S-layers), which form the outermost layers of many Bacteria and Archaea, consist of protein molecules arranged in two-dimensional crystalline arrays. Bacillus anthracis, a gram-positive, spore-forming bacterium, responsible for anthrax, synthesizes two abundant surface proteins: Sap and EA1. Regulatory studies showed that EA1 and Sap appear sequentially at the surface of the parental strain. Sap and EA1 can form arrays. The structural parameters of S-layers from mutant strains (EA1(-) and Sap(-)) were determined by computer image processing of electron micrographs of negatively stained regular S-layer fragments or deflated whole bacteria. Sap and EA1 projection maps were calculated on a p1 symmetry basis. The unit cell parameters of EA1 were a = 69 A, b = 83 A, and gamma = 106 degrees, while those of Sap were a = 184 A, b = 81 A, and gamma = 84 degrees. Freeze-etching experiments and the analysis of the peripheral regions of the cell suggested that the two S-layers have different settings. We characterized the settings of each network at different growth phases. Our data indicated that the scattered emergence of EA1 destabilizes the Sap S-layer.

  1. Dynamic testing of cable structures

    Directory of Open Access Journals (Sweden)

    Caetano Elsa

    2015-01-01

    Full Text Available The paper discusses the role of dynamic testing in the study of cable structures. In this context, the identification of cable force based on vibration measurements is discussed. Vibration and damping assessment are then introduced as the focus of dynamic monitoring systems, and particular aspects of the structural behaviour under environmental loads are analysed. Diverse application results are presented to support the discussion centred on cable-stayed bridges, roof structures, a guyed mast and a transmission line.

  2. A Force Method Model for Dynamic Analysis of Flat-Sag Cable Structures

    Directory of Open Access Journals (Sweden)

    Xing Ma

    2009-01-01

    Full Text Available A new force method is proposed for analysing the dynamic behaviour of oscillating cables with small sags. The accepted dynamic model of such cables reduces to a partial differential equation (the equation of motion and an integral equation (the compatibility equation. In the paper, D’Alembert’s travelling wave solution is applied to the partial differential equation (PDE. Substituting the solution into the compatibility and boundary conditions, the governing equation is obtained in terms of the dynamic tension increment. This equation has been named the force method dynamic equation (FMDE. In this way the infinite-degree-of-freedom dynamic system is effectively simplified to a system with only one unknown. Explicit solutions for both single-span and multi-span cable systems are derived. The natural frequencies obtained from the FMDE are shown to be identical to those deduced using the conventional displacement method (DM. Nonlinear governing equations are developed by considering the effect of quadratic and cubic displacement terms. Finally, two examples are presented to illustrate the accuracy of the proposed force method for single and multi-span cable systems subjected to harmonic forces.

  3. Sensitivity Analysis of the Influence of Structural Parameters on Dynamic Behaviour of Highly Redundant Cable-Stayed Bridges

    Directory of Open Access Journals (Sweden)

    B. Asgari

    2013-01-01

    Full Text Available The model tuning through sensitivity analysis is a prominent procedure to assess the structural behavior and dynamic characteristics of cable-stayed bridges. Most of the previous sensitivity-based model tuning methods are automatic iterative processes; however, the results of recent studies show that the most reasonable results are achievable by applying the manual methods to update the analytical model of cable-stayed bridges. This paper presents a model updating algorithm for highly redundant cable-stayed bridges that can be used as an iterative manual procedure. The updating parameters are selected through the sensitivity analysis which helps to better understand the structural behavior of the bridge. The finite element model of Tatara Bridge is considered for the numerical studies. The results of the simulations indicate the efficiency and applicability of the presented manual tuning method for updating the finite element model of cable-stayed bridges. The new aspects regarding effective material and structural parameters and model tuning procedure presented in this paper will be useful for analyzing and model updating of cable-stayed bridges.

  4. Crystal structure, conformational analysis, and molecular dynamics of tetra-0-methyl-(+)-catechin

    Science.gov (United States)

    Frank R. Fronczek; Richard W. Hemingway; G. Wayne McGraw; Jan P. Steynberg; Carin A. Helfer; Wayne L. Mattice

    1993-01-01

    The structure of tetra-O-methyl-(+)-catechin has been determined in the crystalline state. Two independent molecules, denoted structure A and structure B, exist in the unit cell. Crystals are triclinic, space group P1, a=4.8125(2) Ǻ, b=12.9148(8) Ǻ, c=13.8862(11) Ǻ, α=86.962(6)°, β=89.120(5)°, γ=...

  5. Final design, fluid dynamic and structural mechanical analysis of a liquid hydrogen Moderator for the European Spallation Source

    Science.gov (United States)

    Bessler, Y.; Henkes, C.; Hanusch, F.; Schumacher, P.; Natour, G.; Butzek, M.; Klaus, M.; Lyngh, D.; Kickulies, M.

    2017-02-01

    The European Spallation Source (ESS) is currently in the construction phase and should have first beam on Target in 2019. ESS, located in Sweden, will be the most powerful spallation neutron source worldwide, with the goal to produce neutrons for research. As an in-kind partner the Forschungszentrum Juelich will among others, design and manufacture the four liquid hydrogen Moderators, which are located above and below the Target. Those vessels are confining the cold hydrogen used to reduce the energy level of the fast neutrons, produced by spallation in the Target, in order to make the neutrons usable for neutron scattering instruments. Due to the requirements [1], a fluid dynamic analysis with pressure and temperature depended hydrogen data, taking into account the pseudo critical phenomena and the pulsed neutronic heating (pressure waves) is necessary. With the fluid dynamic results, a structure mechanical analysis including radiation damage investigation (RCC-MRx code [5]), low temperature properties as well as strength reduction by welding can be realized. Finally, the manufacturing and welding completes the design process.

  6. Seasonal Dynamics of Bacterioplankton Community Structure in a Eutrophic Lake as Determined by 5S rRNA Analysis

    Science.gov (United States)

    Höfle, Manfred G.; Haas, Heike; Dominik, Katja

    1999-01-01

    Community structure of bacterioplankton was studied during the major growth season for phytoplankton (April to October) in the epilimnion of a temperate eutrophic lake (Lake Plußsee, northern Germany) by using comparative 5S rRNA analysis. Estimates of the relative abundances of single taxonomic groups were made on the basis of the amounts of single 5S rRNA bands obtained after high-resolution electrophoresis of RNA directly from the bacterioplankton. Full-sequence analysis of single environmental 5S rRNAs enabled the identification of single taxonomic groups of bacteria. Comparison of partial 5S rRNA sequences allowed the detection of changes of single taxa over time. Overall, the whole bacterioplankton community showed two to eight abundant (>4% of the total 5S rRNA) taxa. A distinctive seasonal succession was observed in the taxonomic structure of this pelagic community. A rather-stable community structure, with seven to eight different taxonomic units, was observed beginning in April during the spring phytoplankton bloom. A strong reduction in this diversity occurred at the beginning of the clear-water phase (early May), when only two to four abundant taxa were observed, with one taxon dominating (up to 72% of the total 5S rRNA). The community structure during summer stagnation (June and July) was characterized by frequent changes of different dominating taxa. During late summer, a dinoflagellate bloom (Ceratium hirudinella) occurred, with Comamonas acidovorans (β-subclass of the class Proteobacteria) becoming the dominant bacterial species (average abundance of 43% of the total 5S rRNA). Finally, the seasonal dynamics of the community structure of bacterioplankton were compared with the abundances of other major groups of the aquatic food web, such as phyto- and zooplankton, revealing that strong grazing pressure by zooplankton can reduce microbial diversity substantially in pelagic environments. PMID:10388718

  7. Integrating aerodynamic surface modeling for computational fluid dynamics with computer aided structural analysis, design, and manufacturing

    Science.gov (United States)

    Thorp, Scott A.

    1992-01-01

    This presentation will discuss the development of a NASA Geometry Exchange Specification for transferring aerodynamic surface geometry between LeRC systems and grid generation software used for computational fluid dynamics research. The proposed specification is based on a subset of the Initial Graphics Exchange Specification (IGES). The presentation will include discussion of how the NASA-IGES standard will accommodate improved computer aided design inspection methods and reverse engineering techniques currently being developed. The presentation is in viewgraph format.

  8. On Dynamic Analysis, Optimal Distribution of Cable Tention and Experiment of Cable NET Structures in Large Radio Telescope

    International Nuclear Information System (INIS)

    Duan, Baoyan

    2002-01-01

    This paper presents the researching activities, in which the nonlinear dynamic analysis, optimization of the cables' tension distribution, real 50 meters model experiment are discussed. The long cable structure has been utilized in new generation large radio telescope with the diameter of 500 meters. In design, there are six high concrete towers form which are six computer controlled long cables about 250 meters long met at a cabin, which is a hemisphere with 6 meters diameter. The cabin can be moved three dimensional to track the target. Within the cabin, there is a stable platform. The positioning precision for the platform and cabin are 4mm and 50cm respectively. By which means, the poisoning accuracy can be received becomes a sensible and important problem. For the sake of this, study on vibration of cable with respect to random wind, such as nonlinear response, vortex and galloping, is investigated in this paper. Desirable design is that the tension forces among the six long cables are the same, at least as even as possible. This will be benefit to the control of the system, so that the higher dynamic positioning precision is easy to be obtained. To meet this kind of requirement, the optimal distribution of the cable tensions among cables is discussed and pretty good result is received. Before the real 500 meters diameters antenna is built, an experiment model with 50 meters diameter was built in Xidian University of China, shown in figure 2. The dynamic analysis on vibration (random wind response, vortex and galloping), optimization of the cable tensions' distribution is made with good result. Lots of 50-meter-model site experiments are carried out with useful and valuable results, form which the theory and simulation model has been improved repeatedly until both the model simulation and experiment results are very closed so that the difference can be accepted from the viewpoint of thoroughly, systematically and deeply in the paper. The conclusion

  9. [Dynamic changes of the relationships between economic growth and environmental pressure in Gansu Province: a structural decomposition analysis].

    Science.gov (United States)

    Zhang, Zi-Long; Chen, Xing-Peng; Yang, Jing; Xue, Bing; Li, Yong-Jin

    2010-02-01

    Based on the ideology of macro environmental economics, a function of environmental pressure represented by pollutant emission was built, and the relative importance of the driving factors in the dynamic changes of the relationships between economic growth and environmental pressure in Gansu Province in 1990 - 2005 was analyzed by using structural decomposition analysis (SDA) model combining with 'refined Laspeyres' method. In the study period, the environmental pressure in the Province was mainly caused by the emission of waste gases and solids in the process of economic growth, and showed a rapid increasing trend at the late stage of the period. Population factor had less impact on the increase of this environmental pressure, while economic growth factor had obvious impact on it. Technological progress did mitigate, but could not offset the impact of economic growth factor, and the impacts of economic growth and technological factors on the environmental pressure differed with the kinds of pollutants.

  10. Dynamics Analysis of Origami-Folded Deployable Space Structures with Elastic Hinges

    Data.gov (United States)

    National Aeronautics and Space Administration — The future of space exploration needs highly sophisticated deployable space structure technology in order to achieve the ambitious goals being set today. Several...

  11. Population structure and transmission dynamics of Plasmodium vivax in the Republic of Korea based on microsatellite DNA analysis.

    Science.gov (United States)

    Iwagami, Moritoshi; Fukumoto, Megumi; Hwang, Seung-Young; Kim, So-Hee; Kho, Weon-Gyu; Kano, Shigeyuki

    2012-01-01

    In order to control malaria, it is important to understand the genetic structure of the parasites in each endemic area. Plasmodium vivax is widely distributed in the tropical to temperate regions of Asia and South America, but effective strategies for its elimination have yet to be designed. In South Korea, for example, indigenous vivax malaria was eliminated by the late 1970s, but re-emerged from 1993. We estimated the population structure and temporal dynamics of transmission of P. vivax in South Korea using microsatellite DNA markers. We analyzed 255 South Korean P. vivax isolates collected from 1994 to 2008, based on 10 highly polymorphic microsatellite DNA loci of the P. vivax genome. Allelic data were obtained for the 87 isolates and their microsatellite haplotypes were determined based on a combination of allelic data of the loci. In total, 40 haplotypes were observed. There were two predominant haplotypes: H16 and H25. H16 was observed in 9 isolates (10%) from 1996 to 2005, and H25 in 27 (31%) from 1995 to 2003. These results suggested that the recombination rate of P. vivax in South Korea, a temperate country, was lower than in tropical areas where identical haplotypes were rarely seen in the following year. Next, we estimated the relationships among the 40 haplotypes by eBURST analysis. Two major groups were found: one composed of 36 isolates (41%) including H25; the other of 20 isolates (23%) including H16. Despite the low recombination rate, other new haplotypes that are genetically distinct from the 2 groups have also been observed since 1997 (H27). These results suggested a continual introduction of P. vivax from other population sources, probably North Korea. Molecular epidemiology using microsatellite DNA of the P. vivax population is effective for assessing the population structure and transmission dynamics of the parasites--information that can assist in the elimination of vivax malaria in endemic areas.

  12. Fully three-dimensional analysis of high-speed traintracksoil-structure dynamic interaction

    OpenAIRE

    Galvín, Pedro; Romero Ordoñez, Antonio; Domínguez Abascal, José

    2010-01-01

    In this paper, a general and fully three dimensional multi-body-finite element-boundary element model, formulated in the time domain to predict vibrations due to train passage at the vehicle, the track and the free field, is presented. The vehicle is modelled as a multi-body system and, therefore, the quasi-static and the dynamic excitation mechanisms due to train passage can be considered. The track is modelled using finite elements. The soil is considered as a homogeneous half-space by the ...

  13. Damping mechanisms and models in structural dynamics

    DEFF Research Database (Denmark)

    Krenk, Steen

    2002-01-01

    Several aspects of damping models for dynamic analysis of structures are investigated. First the causality condition for structural response is used to identify rules for the use of complex-valued frequency dependent material models, illustrated by the shortcomings of the elastic hysteretic model...

  14. Observational study on the fine structure and dynamics of a solar jet. II. Energy release process revealed by spectral analysis

    Science.gov (United States)

    Sakaue, Takahito; Tei, Akiko; Asai, Ayumi; Ueno, Satoru; Ichimoto, Kiyoshi; Shibata, Kazunari

    2018-01-01

    We report on a solar jet phenomenon associated with the C5.4 class flare on 2014 November 11. The data of the jet was provided by the Solar Dynamics Observatory, the X-Ray Telescope (XRT) aboard Hinode, and the Interface Region Imaging Spectrograph and Domeless Solar Telescope (DST) at Hida Observatory, Kyoto University. These plentiful data enabled us to present this series of papers to discuss all the processes of the observed phenomena, including energy storage, event trigger, and energy release. In this paper, we focus on the energy release process of the observed jet, and mainly describe our spectral analysis on the Hα data of DST to investigate the internal structure of the Hα jet and its temporal evolution. This analysis reveals that in the physical quantity distributions of the Hα jet, such as line-of-sight velocity and optical thickness, there is a significant gradient in the direction crossing the jet. We interpret this internal structure as the consequence of the migration of the energy release site, based on the idea of ubiquitous reconnection. Moreover, by measuring the horizontal flow of the fine structures in the jet, we succeeded in deriving the three-dimensional velocity field and the line-of-sight acceleration field of the Hα jet. The analysis result indicates that part of the ejecta in the Hα jet experienced additional acceleration after it had been ejected from the lower atmosphere. This secondary acceleration was found to occur in the vicinity of the intersection between the trajectories of the Hα jet and the X-ray jet observed by Hinode/XRT. We propose that a fundamental cause of this phenomenon is magnetic reconnection involving the plasmoid in the observed jet.

  15. A combined multibody and finite element approach for dynamic interaction analysis of high-speed train and railway structure including post-derailment behavior during an earthquake

    Science.gov (United States)

    Tanabe, M.; Wakui, H.; Sogabe, M.; Matsumoto, N.; Tanabe, Y.

    2010-06-01

    A combined multibody and finite element approach is given to solve the dynamic interaction of a Shinkansen train (high-speed train in Japan) and the railway structure including post-derailment during an earthquake effectively. The motion of the train is expressed in multibody dynamics. Efficient mechanical models to express interactions between wheel and track structure including post-derailment are given. Rail and track elements expressed in multibody dynamics and FEM are given to solve contact problems between wheel and long railway components effectively. The motion of a railway structure is modeled with various finite elements and rail and track elements. The computer program has been developed for the dynamic interaction analysis of a Shinkansen train and railway structure including post derailment during an earthquake. Numerical examples are demonstrated.

  16. 31st IMAC Conference on Structural Dynamics

    CERN Document Server

    Adams, Douglas; Carrella, Alex; Mayes, Randy; Rixen, Daniel; Allen, Matt; Cunha, Alvaro; Catbas, Fikret; Pakzad, Shamim; Racic, Vitomir; Pavic, Aleksandar; Reynolds, Paul; Simmermacher, Todd; Cogan, Scott; Moaveni, Babak; Papadimitriou, Costas; Allemang, Randall; Clerck, James; Niezrecki, Christopher; Wicks, Alfred

    2013-01-01

    Topics in Nonlinear Dynamics, Volume 1: Proceedings of the 31st IMAC, A Conference and Exposition on Structural Dynamics, 2013, the first volume of seven from the Conference, brings together contributions to this important area of research and engineering. The collection presents early findings and case studies on fundamental and applied aspects of Structural Dynamics, including papers on:   Nonlinear Oscillations Nonlinearities In Practice Nonlinear System Identification: Methods Nonlinear System Identification: Friction & Contact Nonlinear Modal Analysis Nonlinear Modeling & Simulation Nonlinear Vibration Absorbers Constructive Utilization of Nonlinearity.

  17. Severe transient tests on operating steam generator: analysis of the fluid-structure dynamic thermal interaction

    International Nuclear Information System (INIS)

    David, J.; Procaccia, H.; Billon, F.

    1983-08-01

    The operating efficiency of steam generators (S.G.s) and their structural integrity depend on the design configurations of the feedwater spray within the S.G., and on the operating procedure. To check the merit of some design modifications, and to verify the fluid-structure interaction with a view to preserve the S.G.s integrity during severe operating transients, a special instrumentation that admits the determination of the instantaneous thermal hydraulic characteristics of the flow in the secondary water and the corresponding metal temperature, in particular in the S.G. downcomer and near the S.G. tube sheet, has been installed by EDF on one steam generator of Tricastin unit 1 power plant. In parallel, FRAMATOME has developped a computer code, TEMPTRON, that allows the calculation of the thermal loads and the consequent stresses in the most sollicited zones of the steam generator during transient operation of the plant

  18. Structural dynamic modification

    Indian Academy of Sciences (India)

    In this paper, the direct problem of determing the new response of a system, after some modifications are introduced into the sestem, is analysed using two different databases: the modal database and the frequency response function database. The limitaions of the modal database are discussed. Structural modifications ...

  19. Structure, Reactivity and Dynamics

    Indian Academy of Sciences (India)

    of liquids and solids, structure and transport studies of binary systems, dissociation of endo and exo. 2-norbornyl chlorides and the effect of solvents on the dissociation processes. The ultimate aim of a chemist is to develop the understanding and the ability to alter the rates of chem- ical reactions leading to desired products.

  20. Dynamic Creep Buckling: Analysis of Shell Structures Subjected to Time-dependent Mechanical and Thermal Loading

    Science.gov (United States)

    Simitses, G. J.; Carlson, R. L.; Riff, R.

    1985-01-01

    The objective of the present research is to develop a general mathematical model and solution methodologies for analyzing the structural response of thin, metallic shell structures under large transient, cyclic, or static thermomechanical loads. Among the system responses associated with these loads and conditions are thermal buckling, creep buckling, and ratcheting. Thus geometric and material nonlinearities (of high order) can be anticipated and must be considered in developing the mathematical model. A complete, true ab-initio rate theory of kinematics and kinetics for continuum and curved thin structures, without any restriction on the magnitude of the strains or the deformations, was formulated. The time dependence and large strain behavior are incorporated through the introduction of the time rates of metric and curvature in two coordinate systems: fixed (spatial) and convected (material). The relations between the time derivative and the covariant derivative (gradient) were developed for curved space and motion, so the velocity components supply the connection between the equations of motion and the time rates of change of the metric and curvature tensors.

  1. PRONTO3D users` instructions: A transient dynamic code for nonlinear structural analysis

    Energy Technology Data Exchange (ETDEWEB)

    Attaway, S.W.; Mello, F.J.; Heinstein, M.W.; Swegle, J.W.; Ratner, J.A. [Sandia National Labs., Albuquerque, NM (United States); Zadoks, R.I. [Univ. of Texas, El Paso, TX (United States)

    1998-06-01

    This report provides an updated set of users` instructions for PRONTO3D. PRONTO3D is a three-dimensional, transient, solid dynamics code for analyzing large deformations of highly nonlinear materials subjected to extremely high strain rates. This Lagrangian finite element program uses an explicit time integration operator to integrate the equations of motion. Eight-node, uniform strain, hexahedral elements and four-node, quadrilateral, uniform strain shells are used in the finite element formulation. An adaptive time step control algorithm is used to improve stability and performance in plasticity problems. Hourglass distortions can be eliminated without disturbing the finite element solution using either the Flanagan-Belytschko hourglass control scheme or an assumed strain hourglass control scheme. All constitutive models in PRONTO3D are cast in an unrotated configuration defined using the rotation determined from the polar decomposition of the deformation gradient. A robust contact algorithm allows for the impact and interaction of deforming contact surfaces of quite general geometry. The Smooth Particle Hydrodynamics method has been embedded into PRONTO3D using the contact algorithm to couple it with the finite element method.

  2. Structural dynamics teaching example: A linear test analysis case using open software

    DEFF Research Database (Denmark)

    Sturesson, P. O.; Brandt, A.; Ristinmaa, M.

    2013-01-01

    experimental modal analysis data. By using open software, based on MATLAB®1 as a basis for the example, the applied numerical methods are made transparent to the student. The example is built on a combination of the free CALFEM®2 and ABRAVIBE toolboxes, and thus all code used in this paper is publically...

  3. Structural Analysis of Molten NaNO3 by Molecular Dynamics Simulation

    Science.gov (United States)

    Tahara, Shuta; Toyama, Hiroshi; Shimakura, Hironori; Fukami, Takanori

    2017-08-01

    MD simulation for molten NaNO3 has been performed by using the Born-Mayer-Huggins-type potentials. The new structural features of molten NaNO3 are investigated by several analytical methods. The coordination-number and bond-angle distributions are similar to those of simple molten salts such as NaCl except for the variation caused by the different size of the anion and cation. Na+ ions are attracted toward O- ions, and get separated from N+ ions by Coulomb interactions. The distribution of the dihedral angle between NO3 - plannar ionic molecules has also been investigated.

  4. Structural dynamic modification

    Indian Academy of Sciences (India)

    5th Int. Modal Anal. Conf. (London) 2: 1538±1544. Sestieri A, D'Ambrogio W 1988 Why be model: i.e. how to avoid the use of modes in the modification of vibrating systems. Proc. 6th Int. Modal Anal. Conf. (Orlando) 2: 1100±1106. Sestieri A, D'Ambrogio W 1989 A modification method for vibration control of structures. Mech.

  5. Foams structure and dynamics

    CERN Document Server

    Cantat, Isabelle; Graner, François; Pitois, Olivier; Höhler, Reinard; Elias, Florence; Saint-Jalmes, Arnaud; Rouyer, Florence

    2013-01-01

    This book is the first to provide a thorough description of all aspects of the physico-chemical properties of foams. It sets out what is known about their structure, their stability, and their rheology. Engineers, researchers and students will find descriptions of all the key concepts, illustrated by numerous applications, as well as experiments and exercises for the reader. A solutions manual for lecturers is available via the publisher's web site.

  6. Essentials of applied dynamic analysis

    CERN Document Server

    Jia, Junbo

    2014-01-01

    This book presents up-to-date knowledge of dynamic analysis in engineering world. To facilitate the understanding of the topics by readers with various backgrounds, general principles are linked to their applications from different angles. Special interesting topics such as statistics of motions and loading, damping modeling and measurement, nonlinear dynamics, fatigue assessment, vibration and buckling under axial loading, structural health monitoring, human body vibrations, and vehicle-structure interactions etc., are also presented. The target readers include industry professionals in civil, marine and mechanical engineering, as well as researchers and students in this area.

  7. The Shock Vibration Bulletin. Part 4. Structural Dynamics and Modal Test and Analysis

    Science.gov (United States)

    1987-01-01

    element normal modes anlalysis was performed using the qualified MSC/ NASTRAN solution 3. A 1 DMAP alter was written which directly saved the modal...analysis. A finite element ( NASTRAN ) model was built for the T-34D configuration and the acoustic MODE- DESCRIPTION noise environment applied using the...frequency The model of the deflector at the ]US 90 degree response capability of NASTRAN . The T-34D model location is presented in Figure 1 with the

  8. A modeling study of dynamic characteristic analysis of isolated structure for seismic exciting tests

    International Nuclear Information System (INIS)

    Lee, Jae Han; Koo, G. H.; Yoo, Bong

    1998-04-01

    The fundamental frequency of the isolated superstructure for seismic exciting tests was calculated by 16 Hz with a initial modal analysis model. but the actual modal test resulted in 5 Hz. This large difference was resulted from some uncertainties in analysis modeling of several connection parts between column and upper beam, cross bars of each face of the isolated superstructure. When the stiffness of cross-bars are larger than certain level in all the analyses, the joint stiffness between main slab and columns does not effect to the fundamental frequency. So the fundamental frequency of the isolated superstructure was governed by the cross-bar's stiffness. In actual tests the first and second frequencies show a little difference regardless of the cross section characteristics (inertia moments) of four columns because the joint stiffness between column and main slab is less than 10 8 1b f in/radian. The mounting device of each column to main slab, and the bolting device of each column to upper beam are fabricated with lower stiffness compared to design value. The bolting of cross-bars and the fitness of bolt-hole to bolt were loosed during the modal tests. In the future the tight connecting and the precise assembling of isolated superstructure are required to reduce the difference of the fundamental frequencies obtained from the modal analysis and actual test. (author). 4 refs

  9. Dynamic Response of a Floating Bridge Structure

    OpenAIRE

    Viuff, Thomas; Leira, Bernt Johan; Øiseth, Ole; Xiang, Xu

    2016-01-01

    A theoretical overview of the stochastic dynamic analysis of a floating bridge structure is presented. Emphasis is on the wave-induced response and the waves on the sea surface are idealized as a zero mean stationary Gaussian process. The first-order wave load processes are derived using linear potential theory and the structural idealization is based on the Finite Element Method. A frequency response calculation is presented for a simplified floating bridge structure example emphasising the ...

  10. Task 7a - dynamic analysis of Paks NPP structures: Reactor building

    International Nuclear Information System (INIS)

    Zola, M.

    1995-01-01

    This report refers to the activities of a sub-contract to the Project RER/9/046, awarded to ISMES by the International Atomic Energy Agency (IAEA) of Vienna, to compare the results obtained from the experimental activities performed under previous contract by ISMES with those coming from analytical studies performed in the framework of the Coordinated Research Programme (CRP) on 'Benchmark Study for the Seismic Analysis and Testing of WWER-type Nuclear Power Plants' by other Institutions. After a brief introduction to the problem in Chapter 1, the identification of the comparison positions and reference directions is given in Chapter 3. A very quick description of the performed experimental tests is given in Chapter 4, whereas the characteristics of both experimental and analytical data are presented in Chapter 5. The data processing procedures are reported in Chapter 6 and some simple remarks are given in Chapter 7. (author)

  11. 30th IMAC, A Conference on Structural Dynamics

    CERN Document Server

    Catbas, FN; Mayes, R; Rixen, D; Griffith, DT; Allemang, R; Clerck, J; Klerk, D; Simmermacher, T; Cogan, S; Chauhan, S; Cunha, A; Racic, V; Reynolds, P; Salyards, K; Adams, D; Kerschen, G; Carrella, A; Voormeeren, SN; Allen, MS; Horta, LG; Barthorpe, R; Niezrecki, C; Blough, JR; Vol.1 Topics on the Dynamics of Civil Structures; Vol.2 Topics in Experimental Dynamics Substructuring and Wind Turbine Dynamics; Vol.3 Topics in Nonlinear Dynamics; Vol.4 Topics in Model Validation and Uncertainty Quantification; Vol.5 Topics in Modal Analysis I; Vol.6 Topics in Modal Analysis II

    2012-01-01

    Topics on the Dynamics of Civil Structures, Volume 1, Proceedings of the 30th IMAC, A Conference and Exposition on Structural Dynamics, 2012, the first volume of six from the Conference, brings together 45 contributions to this important area of research and engineering. The collection presents early findings and case studies on fundamental and applied aspects of Structural Dynamics, including papers on: Human Induced Vibrations Bridge Dynamics Operational Modal Analysis Experimental Techniques and Modeling for Civil Structures System Identification for Civil Structures Method and Technologies for Bridge Monitoring Damage Detection for Civil Structures Structural Modeling Vibration Control Method and Approaches for Civil Structures Modal Testing of Civil Structures.

  12. Some Interesting Applications of Probabilistic Techiques in Structural Dynamic Analysis of Rocket Engines

    Science.gov (United States)

    Brown, Andrew M.

    2014-01-01

    Numerical and Analytical methods developed to determine damage accumulation in specific engine components when speed variation included. Dither Life Ratio shown to be well over factor of 2 for specific example. Steady-State assumption shown to be accurate for most turbopump cases, allowing rapid calculation of DLR. If hot-fire speed data unknown, Monte Carlo method developed that uses speed statistics for similar engines. Application of techniques allow analyst to reduce both uncertainty and excess conservatism. High values of DLR could allow previously unacceptable part to pass HCF criteria without redesign. Given benefit and ease of implementation, recommend that any finite life turbomachine component analysis adopt these techniques. Probability Values calculated, compared, and evaluated for several industry-proposed methods for combining random and harmonic loads. Two new excel macros written to calculate combined load for any specific probability level. Closed form Curve fits generated for widely used 3(sigma) and 2(sigma) probability levels. For design of lightweight aerospace components, obtaining accurate, reproducible, statistically meaningful answer critical.

  13. Relating structure and dynamics in organisation models

    NARCIS (Netherlands)

    Jonkers, C.M.; Treur, J.

    2002-01-01

    To understand how an organisational structure relates to dynamics is an interesting fundamental challenge in the area of social modelling. Specifications of organisational structure usually have a diagrammatic form that abstracts from more detailed dynamics. Dynamic properties of agent systems,

  14. Flight Dynamics Analysis Branch

    Science.gov (United States)

    Stengle, Tom; Flores-Amaya, Felipe

    2000-01-01

    This report summarizes the major activities and accomplishments carried out by the Flight Dynamics Analysis Branch (FDAB), Code 572, in support of flight projects and technology development initiatives in fiscal year 2000. The report is intended to serve as a summary of the type of support carried out by the FDAB, as well as a concise reference of key accomplishments and mission experience derived from the various mission support roles. The primary focus of the FDAB is to provide expertise in the disciplines of flight dynamics, spacecraft trajectory, attitude analysis, and attitude determination and control. The FDAB currently provides support for missions and technology development projects involving NASA, government, university, and private industry.

  15. Distributed Dynamic Condition Response Structures

    DEFF Research Database (Denmark)

    Hildebrandt, Thomas; Mukkamala, Raghava Rao

    We present distributed dynamic condition response structures as a declarative process model inspired by the workflow language employed by our industrial partner and conservatively generalizing labelled event structures. The model adds to event structures the possibility to 1) finitely specify...... repeated, possibly infinite behavior, 2) finitely specify fine-grained acceptance conditions for (possibly infinite) runs based on the notion of responses and 3) distribute events via roles. We give a graphical notation inspired by related work by van der Aalst et al and formalize the execution semantics...... as a labelled transition system. Exploration of the relationship between dynamic condition response structures and traditional models for concurrency, application to more complex scenarios, and further extensions of the model is left to future work....

  16. Complex networks: Structure and dynamics

    Science.gov (United States)

    Boccaletti, S.; Latora, V.; Moreno, Y.; Chavez, M.; Hwang, D.-U.

    2006-02-01

    Coupled biological and chemical systems, neural networks, social interacting species, the Internet and the World Wide Web, are only a few examples of systems composed by a large number of highly interconnected dynamical units. The first approach to capture the global properties of such systems is to model them as graphs whose nodes represent the dynamical units, and whose links stand for the interactions between them. On the one hand, scientists have to cope with structural issues, such as characterizing the topology of a complex wiring architecture, revealing the unifying principles that are at the basis of real networks, and developing models to mimic the growth of a network and reproduce its structural properties. On the other hand, many relevant questions arise when studying complex networks’ dynamics, such as learning how a large ensemble of dynamical systems that interact through a complex wiring topology can behave collectively. We review the major concepts and results recently achieved in the study of the structure and dynamics of complex networks, and summarize the relevant applications of these ideas in many different disciplines, ranging from nonlinear science to biology, from statistical mechanics to medicine and engineering.

  17. Static and Dynamic Membrane Structures

    Directory of Open Access Journals (Sweden)

    Sergiu Ivanov

    2012-10-01

    Full Text Available While originally P systems were defined to contain multiset rewriting rules, it turned out that considering different types of rules may produce important results, such as increasing the computational power of the rules. This paper focuses on factoring out the concept of a membrane structure out of various P system models with the goal of providing useful formalisations. Both static and dynamic membrane structures are considered.

  18. On understanding the relationship between structure in the potential surface and observables in classical dynamics: A functional sensitivity analysis approach

    International Nuclear Information System (INIS)

    Judson, R.S.; Rabitz, H.

    1987-01-01

    The relationship between structure in the potential surface and classical mechanical observables is examined by means of functional sensitivity analysis. Functional sensitivities provide maps of the potential surface, highlighting those regions that play the greatest role in determining the behavior of observables. A set of differential equations for the sensitivities of the trajectory components are derived. These are then solved using a Green's function method. It is found that the sensitivities become singular at the trajectory turning points with the singularities going as eta -3 /sup // 2 , with eta being the distance from the nearest turning point. The sensitivities are zero outside of the energetically and dynamically allowed region of phase space. A second set of equations is derived from which the sensitivities of observables can be directly calculated. An adjoint Green's function technique is employed, providing an efficient method for numerically calculating these quantities. Sensitivity maps are presented for a simple collinear atom--diatom inelastic scattering problem and for two Henon--Heiles type Hamiltonians modeling

  19. Dynamic active earth pressure on retaining structures

    Indian Academy of Sciences (India)

    Abstract. Earth-retaining structures constitute an important topic of research in civil engineering, more so under earthquake conditions. For the analysis and design of retaining walls in earthquake-prone zones, accurate estimation of dynamic earth pressures is very important. Conventional methods either use pseudo-static.

  20. Dynamical analysis of highly excited molecular spectra

    Energy Technology Data Exchange (ETDEWEB)

    Kellman, M.E. [Univ. of Oregon, Eugene (United States)

    1993-12-01

    The goal of this program is new methods for analysis of spectra and dynamics of highly excited vibrational states of molecules. In these systems, strong mode coupling and anharmonicity give rise to complicated classical dynamics, and make the simple normal modes analysis unsatisfactory. New methods of spectral analysis, pattern recognition, and assignment are sought using techniques of nonlinear dynamics including bifurcation theory, phase space classification, and quantization of phase space structures. The emphasis is chaotic systems and systems with many degrees of freedom.

  1. Effect of gold nanoparticles on structure and dynamics of binary Lennard-Jones liquid: Wave-vector space analysis

    Science.gov (United States)

    Separdar, L.; Davatolhagh, S.

    2016-12-01

    Molecular dynamics simulations at constant (N , V , T) are used to study the mutual effects of gold nanoparticles on the structure and dynamics of Kob-Andersen binary Lennard-Jones (BLJ) liquid within the framework of mode coupling theory of dynamic glass transition in the reciprocal space. The results show the 'softening' effect of the gold nanoparticles on the liquid dynamics in terms of (i) reducing the mode coupling crossover temperature Tc with respect to that of the bulk BLJ (i.e. BLJ without nanoparticles), (ii) decreasing the time interval of β-relaxation, and (iii) decreasing the exponent γ characterizing the power-law behavior of the α-relaxation time. This softening effect is explained in terms of the van der Waals attraction between the gold atoms comprising the nanoparticle and the BLJ host atoms, such that adsorption of host atoms onto the nanoparticle surface creates more space or free-volume for the other atoms to diffuse. By the same token interactions of purely excluded-volume-type are expected to result in the opposite effect. It is also noted that, much unlike BLJ host particles, the dynamics of gold nanoparticles is much less dependent on the wave-vector and that it exhibits a nearly exponential behavior in the α-relaxation regime.

  2. Influence of the fluctuations of the alignment tensor on the analysis of the structure and dynamics of proteins using residual dipolar couplings

    Energy Technology Data Exchange (ETDEWEB)

    Salvatella, X., E-mail: xs210@cam.ac.uk; Richter, B.; Vendruscolo, M. [University of Cambridge, Department of Chemistry (United Kingdom)], E-mail: mv245@cam.ac.uk

    2008-01-15

    It has been suggested that the fluctuations of the alignment tensor can affect the results of procedures for characterizing the structure and the dynamics of proteins using residual dipolar couplings. We show here that the very significant fluctuations of the steric alignment tensor caused by the dynamics of proteins can be safely ignored when they do not correlate with those of the bond vectors. A detailed analysis of these correlations in the protein ubiquitin reveals that their effects are negligible for the analysis of backbone motions within secondary structure elements, but also that they may be significant in turns, loops and side chains, especially for bond vectors that have small residual dipolar couplings. Our results suggest that methods that explicitly consider the motions of the alignment tensor will be needed to study the large-scale structural fluctuations that take place on the millisecond timescale, which are often important for the biological function of proteins, from residual dipolar coupling measurements.

  3. Dynamic Contingency Analysis Tool

    Energy Technology Data Exchange (ETDEWEB)

    2016-01-14

    The Dynamic Contingency Analysis Tool (DCAT) is an open-platform and publicly available methodology to help develop applications that aim to improve the capabilities of power system planning engineers to assess the impact and likelihood of extreme contingencies and potential cascading events across their systems and interconnections. Outputs from the DCAT will help find mitigation solutions to reduce the risk of cascading outages in technically sound and effective ways. The current prototype DCAT implementation has been developed as a Python code that accesses the simulation functions of the Siemens PSS/E planning tool (PSS/E). It has the following features: It uses a hybrid dynamic and steady-state approach to simulating the cascading outage sequences that includes fast dynamic and slower steady-state events. It integrates dynamic models with protection scheme models for generation, transmission, and load. It models special protection systems (SPSs)/remedial action schemes (RASs) and automatic and manual corrective actions. Overall, the DCAT attempts to bridge multiple gaps in cascading-outage analysis in a single, unique prototype tool capable of automatically simulating and analyzing cascading sequences in real systems using multiprocessor computers.While the DCAT has been implemented using PSS/E in Phase I of the study, other commercial software packages with similar capabilities can be used within the DCAT framework.

  4. Robustness Analysis of Dynamic Watermarks

    Directory of Open Access Journals (Sweden)

    Ivan V. Nechta

    2017-06-01

    Full Text Available In this paper we consider previously known scheme of dynamic watermarks embedding (Ra- dix-n that is used for preventing illegal use of software. According to the scheme a watermark is dynamic linked data structure (graph, which is created in memory during program execution. Hidden data, such as information about author, can be represented in a different type of graph structure. This data can be extracted and demonstrated in judicial proceedings. This paper declared that the above mentioned scheme was previously one of the most reliable, has a number of features that allows an attacker to detect a stage of watermark construction in the program, and therefore it can be corrupted or deleted. The author of this article shows the weakness of Radix-N scheme, which consists in the fact that we can reveal dynamic data structures of a program by using information received from some API-functions hooker which catches function calls of dynamic memory allocation. One of these data structures is the watermark. Pointers on dynamically created objects (arrays, variables, class items, etc. of a program can be detected by content analysis of computer's RAM. Different dynamic objects in memory interconnected by pointers form dynamic data structures of a program such as lists, stacks, trees and other graphs (including the watermark. Our experiment shows that in the vast majority of cases the amount of data structure in programs is small, which increases probability of a successful attack. Also we present an algorithm for finding connected components of a graph with linear time-consuming in cases where the number of nodes is about 106. On the basis of the experimental findings the new watermarking scheme has been presented, which is resistant to the proposed attack. It is offered to use different graph structure representation of a watermark, where edges are implemented using unique signatures. Our scheme uses content encrypting of graph nodes (except signature

  5. A mathematical analysis of the effects of Hebbian learning rules on the dynamics and structure of discrete-time random recurrent neural networks.

    Science.gov (United States)

    Siri, Benoît; Berry, Hugues; Cessac, Bruno; Delord, Bruno; Quoy, Mathias

    2008-12-01

    We present a mathematical analysis of the effects of Hebbian learning in random recurrent neural networks, with a generic Hebbian learning rule, including passive forgetting and different timescales, for neuronal activity and learning dynamics. Previous numerical work has reported that Hebbian learning drives the system from chaos to a steady state through a sequence of bifurcations. Here, we interpret these results mathematically and show that these effects, involving a complex coupling between neuronal dynamics and synaptic graph structure, can be analyzed using Jacobian matrices, which introduce both a structural and a dynamical point of view on neural network evolution. Furthermore, we show that sensitivity to a learned pattern is maximal when the largest Lyapunov exponent is close to 0. We discuss how neural networks may take advantage of this regime of high functional interest.

  6. Structure analysis of ZnO-TeO2 glasses by means of neutron diffraction and molecular dynamics

    International Nuclear Information System (INIS)

    Matsumoto, Hiroshige; Mabuchi, Toshiro; Shigesato, Yuzo; Yasui, Itaru

    1996-01-01

    Structures of x ZnO-(1-x)TeO 2 glasses (x = 0.1, 0.2, 0.3) were investigated by means of neutron diffraction and molecular dynamics. Modified Keating three-body potential and imaginary negative point charge were applied to the simulation, which successfully represented complex structure units in tellurite glasses. It was concluded that TeO 3+1 was a dominant component in the network structure of the zinc tellurite glasses. The fraction of the TeO 3+1 unit was almost independent of the amount of ZnO. Zinc atoms are considered to play a role in network formation in the glasses, which was estimated on the basis of the coordination state of tellurium. (author)

  7. Evolutionary dynamics in structured populations

    Science.gov (United States)

    Nowak, Martin A.; Tarnita, Corina E.; Antal, Tibor

    2010-01-01

    Evolutionary dynamics shape the living world around us. At the centre of every evolutionary process is a population of reproducing individuals. The structure of that population affects evolutionary dynamics. The individuals can be molecules, cells, viruses, multicellular organisms or humans. Whenever the fitness of individuals depends on the relative abundance of phenotypes in the population, we are in the realm of evolutionary game theory. Evolutionary game theory is a general approach that can describe the competition of species in an ecosystem, the interaction between hosts and parasites, between viruses and cells, and also the spread of ideas and behaviours in the human population. In this perspective, we review the recent advances in evolutionary game dynamics with a particular emphasis on stochastic approaches in finite sized and structured populations. We give simple, fundamental laws that determine how natural selection chooses between competing strategies. We study the well-mixed population, evolutionary graph theory, games in phenotype space and evolutionary set theory. We apply these results to the evolution of cooperation. The mechanism that leads to the evolution of cooperation in these settings could be called ‘spatial selection’: cooperators prevail against defectors by clustering in physical or other spaces. PMID:20008382

  8. the use of the dynamic magnification factor in the dynamic analysis

    African Journals Online (AJOL)

    Uncle Greg 4 Real

    ABSTRACT. This paper examined the use of the dynamic magnification factor in the analysis of framed structures. It is a method of practice in dynamic analysis of structures to magnify static response by a dynamic magnification factor in order to obtain the equivalent dynamic response. This method has been applied to the ...

  9. Contribution to the dynamic analysis of prestressed and preloaded spring-mass systems of variable structure under shock load

    International Nuclear Information System (INIS)

    Matthees, W.

    1980-01-01

    The purpose of this work is the development of a method to analyze on impact load structural systems whose topologically variable system arrangements are dependent on temporarily varying deformation conditions impact loads. This method serves to examine the prototype of a dynamically excited burst protection system for a nuclear power plant. Evidence is given that in case of hypothetical failure of the prestressed reactor pressure vessel the maximum load capacity of the reactor core is not exceeded, which in turn guarantees safe shutdown of the reactor. (orig./HP) [de

  10. Correlation of numerical and experimental analysis for dynamic behaviour of a body-in-white (BIW structure

    Directory of Open Access Journals (Sweden)

    Abdullah N.A.Z.

    2017-01-01

    Full Text Available In order to determine the reliability of data gathered using computational version of finite element analysis, experimental data is often used for validation. In case of finite element analysis, it can sometimes be considered as inaccurate especially when subjected to complex and large structure such as body-in-shite. This is due to difficulties that might occur in modelling of joints, boundary conditions and damping of the structure. In this study, a process of comparison and validation of model based test design with modal testing results was conducted. Modal properties (natural frequencies, mode shapes, and damping ratio of a body-in-white (BIW structure were determined using both experimental modal analysis (EMA and finite element analysis (FEA. Correlation of both sets of data was performed for validation. It appeared that there was significant value of error between those two sets of data. The discrepancies that appear after correlation was then reduced by performing model updating procedure. The results presented here may demonstrate the effectiveness of model updating technique on improving the complex structure such as BIW structure.

  11. Structure and dynamics of a [1:1] drug-DNA complex: Analysis of 2D NMR data using molecular mechanics and molecular dynamics calculations

    International Nuclear Information System (INIS)

    Sarma, R.H.; Sarma, M.H.; Umemoto, K.

    1990-01-01

    1D/2D NMR studies are reported for a [1:1] complex of d(GA 4 T 4 C) 2 and Dst2 (an analogue of distamycin A). Full- Matrix NOESY Simulations, Molecular Mechanics and Molecular Dynamics Calculations are performed to analyze the NMR data. Results show that drug-DNA complex formation is driven by static features like H-bonding and steric interactions in the minor-groove of DNA. As a consequence of drug binding, a non-linear oscillatory mode is activated. In this mode the molecule samples equilibrium structural states of difference degrees of bending. It is noted that these structures belong to three distinctly different energy wells that satisfy the same NMR data. 14 refs., 4 figs., 2 tabs

  12. Structure and dynamics of solutions

    CERN Document Server

    Ohtaki, H

    2013-01-01

    Recent advances in the study of structural and dynamic properties of solutions have provided a molecular picture of solute-solvent interactions. Although the study of thermodynamic as well as electronic properties of solutions have played a role in the development of research on the rate and mechanism of chemical reactions, such macroscopic and microscopic properties are insufficient for a deeper understanding of fast chemical and biological reactions. In order to fill the gap between the two extremes, it is necessary to know how molecules are arranged in solution and how they change their pos

  13. Spectral analysis of bedform dynamics

    DEFF Research Database (Denmark)

    Winter, Christian; Ernstsen, Verner Brandbyge; Noormets, Riko

    Successive multibeam echo sounder surveys in tidal channels off Esbjerg (Denmark) on the North Sea coast reveal the dynamics of subaquatic compound dunes. Mainly driven by tidal currents, dune structures show complex migration patterns in all temporal and spatial scales. Common methods for the an......Successive multibeam echo sounder surveys in tidal channels off Esbjerg (Denmark) on the North Sea coast reveal the dynamics of subaquatic compound dunes. Mainly driven by tidal currents, dune structures show complex migration patterns in all temporal and spatial scales. Common methods...... for the analysis of bedform migration are based on the description of average characteristics as dune length, height and celerity. Their application to superimposed structures is dissatisfying as the recognition of dunes is subjective and work intensive. The high resolution and accuracy of the bathymetric surveys...... of the single harmonic constituents is assumed to be uniform and stationary, bedform dynamics can be completely assessed by changes in amplitude and phase. Dune migration at several transects were analysed and quantified by taking into account the phase differences of individual harmonic constituents...

  14. Dynamic range majority data structures

    DEFF Research Database (Denmark)

    Elmasry, Amr Ahmed Abd Elmoneim; He, Meng; Munro, J. Ian

    2011-01-01

    Given a set P of n coloured points on the real line, we study the problem of answering range α-majority (or "heavy hitter") queries on P. More specifically, for a query range Q, we want to return each colour that is assigned to more than an α-fraction of the points contained in Q. We present a new......((lg n/(α lglg n)). For constant values of α, this improved query time matches an existing lower bound, for any data structure with polylogarithmic update time. We also generalize our data structure to handle sets of points in d-dimensions, for d ≥ 2, as well as dynamic arrays, in which each entry...

  15. Spectral analysis of bedform dynamics

    DEFF Research Database (Denmark)

    Winter, Christian; Ernstsen, Verner Brandbyge; Noormets, Riko

    Successive multibeam echo sounder surveys in tidal channels off Esbjerg (Denmark) on the North Sea coast reveal the dynamics of subaquatic compound dunes. Mainly driven by tidal currents, dune structures show complex migration patterns in all temporal and spatial scales. Common methods for the an....... The proposed method overcomes the above mentioned problems of common descriptive analysis as it is an objective and straightforward mathematical process. The spectral decomposition of superimposed dunes allows a detailed description and analysis of dune patterns and migration.......Successive multibeam echo sounder surveys in tidal channels off Esbjerg (Denmark) on the North Sea coast reveal the dynamics of subaquatic compound dunes. Mainly driven by tidal currents, dune structures show complex migration patterns in all temporal and spatial scales. Common methods...... allows the application of a procedure, which has been a standard for the analysis of water waves for long times: The bathymetric signal of a cross-section of subaquatic compound dunes is approximated by the sum of a set of harmonic functions, derived by Fourier transformation. If the wavelength...

  16. Structural dynamics of turbo-machines

    CERN Document Server

    Rangwala, AS

    2009-01-01

    The book presents a detailed and comprehensive treatment of structural vibration evaluation of turbo-machines. Starting with the fundamentals of the theory of vibration as related to various aspects of rotating machines, the dynamic analysis procedures of a broad spectrum of turbo-machines is covered. An in-depth procedure for analyzing the torsional and flexural oscillations of the components and of the rotor-bearing system is presented. The latest trends in design and analysis are presented, chief among them: Blade and coupled disk-blade mod

  17. Relating structure and dynamics in organisation models

    NARCIS (Netherlands)

    Jonker, C.M.; Treur, J.

    2003-01-01

    To understand how an organisational structure relates to dynamics is an interesting fundamental challenge in the area of social modelling. Specifications of organisational structure usually have a diagrammatic form that abstracts from more detailed dynamics. Dynamic properties of agent systems, on

  18. Dynamics and structure of stretched flames

    Energy Technology Data Exchange (ETDEWEB)

    Law, C.K. [Princeton Univ., NJ (United States)

    1993-12-01

    This program aims to gain fundamental understanding on the structure, geometry, and dynamics of laminar premixed flames, and relate these understanding to the practical issues of flame extinction and stabilization. The underlying fundamental interest here is the recent recognition that the response of premixed flames can be profoundly affected by flame stretch, as manifested by flow nonuniformity, flame curvature, and flame/flow unsteadiness. As such, many of the existing understanding on the behavior of premixed flames need to be qualitatively revised. The research program consists of three major thrusts: (1) detailed experimental and computational mapping of the structure of aerodynamically-strained planar flames, with emphasis on the effects of heat loss, nonequidiffusion, and finite residence time on the flame thickness, extent of incomplete reaction, and the state of extinction. (2) Analytical study of the geometry and dynamics of stretch-affected wrinkled flame sheets in simple configurations, as exemplified by the Bunsen flame and the spatially-periodic flame, with emphasis on the effects of nonlinear stretch, the phenomena of flame cusping, smoothing, and tip opening, and their implications on the structure and burning rate of turbulent flames. (3) Stabilization and blowoff of two-dimensional inverted premixed and stabilization and determining the criteria governing flame blowoff. The research is synergistically conducted through the use of laser-based diagnostics, computational simulation of the flame structure with detailed chemistry and transport, and mathematical analysis of the flame dynamics.

  19. Structured population dynamics: continuous size and discontinuous stage structures.

    Science.gov (United States)

    Buffoni, Giuseppe; Pasquali, Sara

    2007-04-01

    A nonlinear stochastic model for the dynamics of a population with either a continuous size structure or a discontinuous stage structure is formulated in the Eulerian formalism. It takes into account dispersion effects due to stochastic variability of the development process of the individuals. The discrete equations of the numerical approximation are derived, and an analysis of the existence and stability of the equilibrium states is performed. An application to a copepod population is illustrated; numerical results of Eulerian and Lagrangian models are compared.

  20. Gradient-based optimization in nonlinear structural dynamics

    DEFF Research Database (Denmark)

    Dou, Suguang

    , frequency stabilization, and disk resonator gyroscope. For advanced design of these structures, it is of considerable value to extend current optimization in linear structural dynamics into nonlinear structural dynamics. In this thesis, we present a framework for modelling, analysis, characterization......The intrinsic nonlinearity of mechanical structures can give rise to rich nonlinear dynamics. Recently, nonlinear dynamics of micro-mechanical structures have contributed to developing new Micro-Electro-Mechanical Systems (MEMS), for example, atomic force microscope, passive frequency divider...... coefficients are calculated directly from a nonlinear finite element model. Based on the analysis and the characterization, a new class of optimization problems is studied. In the optimization, design sensitivity analysis is performed by using the adjoint method which is suitable for large-scale structural...

  1. Langevin dynamics for ramified structures

    Science.gov (United States)

    Méndez, Vicenç; Iomin, Alexander; Horsthemke, Werner; Campos, Daniel

    2017-06-01

    We propose a generalized Langevin formalism to describe transport in combs and similar ramified structures. Our approach consists of a Langevin equation without drift for the motion along the backbone. The motion along the secondary branches may be described either by a Langevin equation or by other types of random processes. The mean square displacement (MSD) along the backbone characterizes the transport through the ramified structure. We derive a general analytical expression for this observable in terms of the probability distribution function of the motion along the secondary branches. We apply our result to various types of motion along the secondary branches of finite or infinite length, such as subdiffusion, superdiffusion, and Langevin dynamics with colored Gaussian noise and with non-Gaussian white noise. Monte Carlo simulations show excellent agreement with the analytical results. The MSD for the case of Gaussian noise is shown to be independent of the noise color. We conclude by generalizing our analytical expression for the MSD to the case where each secondary branch is n dimensional.

  2. Global Analysis of Nonlinear Dynamics

    CERN Document Server

    Luo, Albert

    2012-01-01

    Global Analysis of Nonlinear Dynamics collects chapters on recent developments in global analysis of non-linear dynamical systems with a particular emphasis on cell mapping methods developed by Professor C.S. Hsu of the University of California, Berkeley. This collection of contributions prepared by a diverse group of internationally recognized researchers is intended to stimulate interests in global analysis of complex and high-dimensional nonlinear dynamical systems, whose global properties are largely unexplored at this time. This book also: Presents recent developments in global analysis of non-linear dynamical systems Provides in-depth considerations and extensions of cell mapping methods Adopts an inclusive style accessible to non-specialists and graduate students Global Analysis of Nonlinear Dynamics is an ideal reference for the community of nonlinear dynamics in different disciplines including engineering, applied mathematics, meteorology, life science, computational science, and medicine.  

  3. Dynamic response analysis of the PSE torus

    International Nuclear Information System (INIS)

    Arthur, D.F.

    1977-01-01

    The paper describes a structural dynamic analysis of the 1 / 5 -scale BWR toroidal wetwell. The subscale toroidal wetwell is part of the Pressure Suppression Experiment Facility at Lawrence Livermore Laboratory. The analysis objective is to show that experimental structural loads measured by load cells in the wetwell supports are consistent with the internal hydrodynamic forcing function measured by pressure transducers. Finite element analysis of the wetwell indicates that the load and pressure measurements are consistent

  4. Handbook on dynamics of jointed structures.

    Energy Technology Data Exchange (ETDEWEB)

    Ames, Nicoli M.; Lauffer, James P.; Jew, Michael D.; Segalman, Daniel Joseph; Gregory, Danny Lynn; Starr, Michael James; Resor, Brian Ray

    2009-07-01

    The problem of understanding and modeling the complicated physics underlying the action and response of the interfaces in typical structures under dynamic loading conditions has occupied researchers for many decades. This handbook presents an integrated approach to the goal of dynamic modeling of typical jointed structures, beginning with a mathematical assessment of experimental or simulation data, development of constitutive models to account for load histories to deformation, establishment of kinematic models coupling to the continuum models, and application of finite element analysis leading to dynamic structural simulation. In addition, formulations are discussed to mitigate the very short simulation time steps that appear to be required in numerical simulation for problems such as this. This handbook satisfies the commitment to DOE that Sandia will develop the technical content and write a Joints Handbook. The content will include: (1) Methods for characterizing the nonlinear stiffness and energy dissipation for typical joints used in mechanical systems and components. (2) The methodology will include practical guidance on experiments, and reduced order models that can be used to characterize joint behavior. (3) Examples for typical bolted and screw joints will be provided.

  5. Dynamics of Correlation Structure in Stock Market

    Directory of Open Access Journals (Sweden)

    Maman Abdurachman Djauhari

    2014-01-01

    Full Text Available In this paper a correction factor for Jennrich’s statistic is introduced in order to be able not only to test the stability of correlation structure, but also to identify the time windows where the instability occurs. If Jennrich’s statistic is only to test the stability of correlation structure along predetermined non-overlapping time windows, the corrected statistic provides us with the history of correlation structure dynamics from time window to time window. A graphical representation will be provided to visualize that history. This information is necessary to make further analysis about, for example, the change of topological properties of minimal spanning tree. An example using NYSE data will illustrate its advantages.

  6. Structural and Dynamical Properties of Barium Stannate

    Science.gov (United States)

    Phelan, D.; Krogstad, M. J.; Lopez-Bezanilla, A.; Parshall, D.; Gim, Y.; Cooper, S. L.; Zheng, H.

    Barium stannate based perovskites have recently drawn attention due to their potential as transparent conducting oxides and reports of high carrier mobility in La-doped single crystals. Published DFT calculations and experimental results have suggested phonon instabilities at high symmetry zone boundary positions and local octahedral rotations, respectively, for BaSnO3. Here, we discuss recent structural measurements of BaSnO3, in which we have searched for such distortions by employing a combination of single crystal neutron diffraction and total scattering analysis of powder neutron diffraction. Moreover, we discuss lattice dynamical measurements, comparing phonon dispersion measurements to DFT calculations.

  7. Analysis of risk-structured vaccination model for the dynamics of oncogenic and warts-causing HPV types.

    Science.gov (United States)

    Alsaleh, Aliya A; Gumel, Abba B

    2014-07-01

    A new deterministic model is designed and used to assess the community-wide impact of mass vaccination of new sexually active individuals on the dynamics of the oncogenic and warts-causing HPV types. Rigorous qualitative analyses of the model, which incorporates the two currently available anti-HPV vaccines, reveal that it undergoes competitive exclusion when the reproduction of one HPV risk type (low/high) exceeds unity, while that of the other HPV risk type is less than unity. For the case when the reproduction numbers of the two HPV risk types (low/high) exceed unity, the two risk types co-exist. It is shown that the sub-model with the low-risk HPV types only has at least one endemic equilibrium whenever the associated reproduction threshold exceeds unity. Furthermore, this sub-model undergoes a re-infection-induced backward bifurcation under certain conditions. In the absence of the re-infection of recovered individuals and cancer-induced mortality in males, the associated disease-free equilibrium of the full (risk-structured) model is shown to be globally asymptotically stable whenever the reproduction number of the model is less than unity (that is, the full model does not undergo backward bifurcation under this setting). It is shown, via numerical simulations, that the use of the Gardasil vaccine could lead to the effective control of HPV in the community if the coverage rate is in the range of 73-95 % (84 %). If 70 % of the new sexually active susceptible females are vaccinated with the Gardasil vaccine, additionally vaccinating 34-56 % (45 %) of the new sexually active susceptible males can lead to the effective community-wide control (or elimination) of the HPV types.

  8. Algebraic Structure of Dynamical Systems

    Science.gov (United States)

    2017-05-22

    dynamical system is a function based upon a finite window size of a sequence. Suppose we have a function ϕ which we know is a symmetry of a system (X...this finite window , we can determine what ϕ(x)i is. Example 4.3. Let (X, T ) be a symbolic dynamical system . Let x = . . . 011011110001 . . .. Suppose...the centralizer of any dynamical system is a group with the operation of composition. Given a dynamical system (X, T ) acted on by Z we say that the

  9. The Dynamical Analysis of a Prey-Predator Model with a Refuge-Stage Structure Prey Population

    Directory of Open Access Journals (Sweden)

    Raid Kamel Naji

    2016-01-01

    Full Text Available We proposed and analyzed a mathematical model dealing with two species of prey-predator system. It is assumed that the prey is a stage structure population consisting of two compartments known as immature prey and mature prey. It has a refuge capability as a defensive property against the predation. The existence, uniqueness, and boundedness of the solution of the proposed model are discussed. All the feasible equilibrium points are determined. The local and global stability analysis of them are investigated. The occurrence of local bifurcation (such as saddle node, transcritical, and pitchfork near each of the equilibrium points is studied. Finally, numerical simulations are given to support the analytic results.

  10. Structural and dynamical properties of Yukawa balls

    International Nuclear Information System (INIS)

    Block, D; Kroll, M; Arp, O; Piel, A; Kaeding, S; Ivanov, Y; Melzer, A; Henning, C; Baumgartner, H; Ludwig, P; Bonitz, M

    2007-01-01

    To study the structural and dynamical properties of finite 3D dust clouds (Yukawa balls) new diagnostic tools have been developed. This contribution describes the progress towards 3D diagnostics for measuring the particle positions. It is shown that these diagnostics are capable of investigating the structural and dynamical properties of Yukawa balls and gaining insight into their basic construction principles

  11. Elucidation of the mode of interaction of thermolysin with a proteinaceous metalloproteinase inhibitor, SMPI, based on a model complex structure and a structural dynamics analysis.

    Science.gov (United States)

    Tate, S; Ohno, A; Seeram, S S; Hiraga, K; Oda, K; Kainosho, M

    1998-09-18

    SMPI is a proteinaceous microbial metalloproteinase inhibitor that was isolated from Streptomyces nigrescens TK-23 in 1979. SMPI is known to selectively inhibit the metalloproteinases in the gluzincin family, according to the Rawling and Barrett classification. There has been no report on the interaction of a metalloproteinase in the family of gluzincins with its specific proteinaceous inhibitor. We have solved the solution structure of SMPI by NMR. Here, we report the binding mode of SMPI to thermolysin, based on the model complex structure generated using our high-resolution NMR structure of SMPI and the crystal structure of thermolysin. The obtained complex model shows that the extruded loop of SMPI, with the scissile bond Cys64-Val65, is complementary in shape to the active cleft of thermolysin. In the complex, the Cys64 (P1) carbonyl oxygen atom can form a tetrahedral coordination to the active zinc in thermolysin, and simultaneously, the methyl groups of Val65 (P1') are closely located in the hydrophobic S1' pocket in thermolysin. From the electrostatic potential surface calculation, the active loop of SMPI and the active cleft in thermolysin have been shown to be complementary in the surface charge distribution, resulting in the stabilization of the complex. The apparently large active loop is less flexible, but maintains a conformation in the nano- to picosecond time-scale, as elucidated from the 15N spin relaxation analysis. This is a quite different structural feature of SMPI from the flexible binding loop generally found in the serine proteinase inhibitors, such as SSI and eglin c, and can be related to the narrow specificity of SMPI. The present study provides the first insight into the interaction between a proteinaceous inhibitor and a gluzincin metalloproteinase. Copyright 1998 Academic Press.

  12. Resilience of branching and massive corals to wave loading under sea level rise--a coupled computational fluid dynamics-structural analysis.

    Science.gov (United States)

    Baldock, Tom E; Karampour, Hassan; Sleep, Rachael; Vyltla, Anisha; Albermani, Faris; Golshani, Aliasghar; Callaghan, David P; Roff, George; Mumby, Peter J

    2014-09-15

    Measurements of coral structural strength are coupled with a fluid dynamics-structural analysis to investigate the resilience of coral to wave loading under sea level rise and a typical Great Barrier Reef lagoon wave climate. The measured structural properties were used to determine the wave conditions and flow velocities that lead to structural failure. Hydrodynamic modelling was subsequently used to investigate the type of the bathymetry where coral is most vulnerable to breakage under cyclonic wave conditions, and how sea level rise (SLR) changes this vulnerability. Massive corals are determined not to be vulnerable to wave induced structural damage, whereas branching corals are susceptible at wave induced orbital velocities exceeding 0.5m/s. Model results from a large suite of idealised bathymetry suggest that SLR of 1m or a loss of skeleton strength of order 25% significantly increases the area of reef flat where branching corals are exposed to damaging wave induced flows. Copyright © 2014 Elsevier Ltd. All rights reserved.

  13. Fluid-Thermal-Structural Coupled Analysis of a Radial Inflow Micro Gas Turbine Using Computational Fluid Dynamics and Computational Solid Mechanics

    Directory of Open Access Journals (Sweden)

    Yonghui Xie

    2014-01-01

    Full Text Available A three-dimensional fluid-thermal-structural coupled analysis for a radial inflow micro gas turbine is conducted. First, a fluid-thermal coupled analysis of the flow and temperature fields of the nozzle passage and the blade passage is performed by using computational fluid dynamics (CFD. The flow and heat transfer characteristics of different sections are analyzed in detail. The thermal load and the aerodynamic load are then obtained from the temperature field and the pressure distribution. The stress distributions of the blade are finally studied by using computational solid mechanics (CSM considering three cases of loads: thermal load, aerodynamics load combined with centrifugal load, and all the three types of loads. The detailed parameters of the flow, temperature, and the stress are obtained and analyzed. The numerical results obtained provide a useful knowledge base for further exploration of radial gas turbine design.

  14. 4th International Conference on Structural Nonlinear Dynamics and Diagnosis

    CERN Document Server

    2018-01-01

    This book presents contributions on the most active lines of recent advanced research in the field of nonlinear mechanics and physics selected from the 4th International Conference on Structural Nonlinear Dynamics and Diagnosis. It includes fifteen chapters by outstanding scientists, covering various aspects of applications, including road tanker dynamics and stability, simulation of abrasive wear, energy harvesting, modeling and analysis of flexoelectric nanoactuator, periodic Fermi–Pasta–Ulam problems, nonlinear stability in Hamiltonian systems, nonlinear dynamics of rotating composites, nonlinear vibrations of a shallow arch, extreme pulse dynamics in mode-locked lasers, localized structures in a photonic crystal fiber resonator, nonlinear stochastic dynamics, linearization of nonlinear resonances, treatment of a linear delay differential equation, and fractional nonlinear damping. It appeals to a wide range of experts in the field of structural nonlinear dynamics and offers researchers and engineers a...

  15. Analysis of the dynamic behavior of structures using the high-rate GNSS-PPP method combined with a wavelet-neural model: Numerical simulation and experimental tests

    Science.gov (United States)

    Kaloop, Mosbeh R.; Yigit, Cemal O.; Hu, Jong W.

    2018-03-01

    Recently, the high rate global navigation satellite system-precise point positioning (GNSS-PPP) technique has been used to detect the dynamic behavior of structures. This study aimed to increase the accuracy of the extraction oscillation properties of structural movements based on the high-rate (10 Hz) GNSS-PPP monitoring technique. A developmental model based on the combination of wavelet package transformation (WPT) de-noising and neural network prediction (NN) was proposed to improve the dynamic behavior of structures for GNSS-PPP method. A complicated numerical simulation involving highly noisy data and 13 experimental cases with different loads were utilized to confirm the efficiency of the proposed model design and the monitoring technique in detecting the dynamic behavior of structures. The results revealed that, when combined with the proposed model, GNSS-PPP method can be used to accurately detect the dynamic behavior of engineering structures as an alternative to relative GNSS method.

  16. Structural stability of nonlinear population dynamics

    Science.gov (United States)

    Cenci, Simone; Saavedra, Serguei

    2018-01-01

    In population dynamics, the concept of structural stability has been used to quantify the tolerance of a system to environmental perturbations. Yet, measuring the structural stability of nonlinear dynamical systems remains a challenging task. Focusing on the classic Lotka-Volterra dynamics, because of the linearity of the functional response, it has been possible to measure the conditions compatible with a structurally stable system. However, the functional response of biological communities is not always well approximated by deterministic linear functions. Thus, it is unclear the extent to which this linear approach can be generalized to other population dynamics models. Here, we show that the same approach used to investigate the classic Lotka-Volterra dynamics, which is called the structural approach, can be applied to a much larger class of nonlinear models. This class covers a large number of nonlinear functional responses that have been intensively investigated both theoretically and experimentally. We also investigate the applicability of the structural approach to stochastic dynamical systems and we provide a measure of structural stability for finite populations. Overall, we show that the structural approach can provide reliable and tractable information about the qualitative behavior of many nonlinear dynamical systems.

  17. Identification of Potent Chloride Intracellular Channel Protein 1 Inhibitors from Traditional Chinese Medicine through Structure-Based Virtual Screening and Molecular Dynamics Analysis

    Directory of Open Access Journals (Sweden)

    Wei Wang

    2017-01-01

    Full Text Available Chloride intracellular channel 1 (CLIC1 is involved in the development of most aggressive human tumors, including gastric, colon, lung, liver, and glioblastoma cancers. It has become an attractive new therapeutic target for several types of cancer. In this work, we aim to identify natural products as potent CLIC1 inhibitors from Traditional Chinese Medicine (TCM database using structure-based virtual screening and molecular dynamics (MD simulation. First, structure-based docking was employed to screen the refined TCM database and the top 500 TCM compounds were obtained and reranked by X-Score. Then, 30 potent hits were achieved from the top 500 TCM compounds using cluster and ligand-protein interaction analysis. Finally, MD simulation was employed to validate the stability of interactions between each hit and CLIC1 protein from docking simulation, and Molecular Mechanics/Generalized Born Surface Area (MM-GBSA analysis was used to refine the virtual hits. Six TCM compounds with top MM-GBSA scores and ideal-binding models were confirmed as the final hits. Our study provides information about the interaction between TCM compounds and CLIC1 protein, which may be helpful for further experimental investigations. In addition, the top 6 natural products structural scaffolds could serve as building blocks in designing drug-like molecules for CLIC1 inhibition.

  18. Analysis of dynamic accumulative damage about the lining structure of high speed railway’s tunnel based on ultrasonic testing technology

    Science.gov (United States)

    Wang, Xiang-qiu; Zhang, Huojun; Xie, Wen-xi

    2017-08-01

    Based on the similar material model test of full tunnel, the theory of elastic wave propagation and the testing technology of intelligent ultrasonic wave had been used to research the dynamic accumulative damage characteristics of tunnel’s lining structure under the dynamic loads of high speed train. For the more, the dynamic damage variable of lining structure of high speed railway’s tunnel was obtained. The results shown that the dynamic cumulative damage of lining structure increases nonlinearly with the times of cumulative vibration, the weakest part of dynamic cumulative damage is the arch foot of tunnel. Much more attention should be paid to the design and operation management of high speed railway’s tunnel.

  19. POSTER : Identifying dynamic data structures in Malware

    NARCIS (Netherlands)

    Rupprecht, Thomas; Chen, Xi; White, David H.; Mühlberg, Jan Tobias; Bos, Herbert; Lüttgen, Gerald

    2016-01-01

    As the complexity of malware grows, so does the necessity of employing program structuring mechanisms during development. While control ow structuring is often obfuscated, the dynamic data structures employed by the program are typically untouched. We report on work in progress that exploits this

  20. Robust Planning for Dynamic Tensegrity Structures

    Data.gov (United States)

    National Aeronautics and Space Administration — The project will research and develop high-performance motion planners for dynamic tensegrity structures, which can be used as robotic mobility and manipulation...

  1. Understanding Microbial Communities: Function, Structure and Dynamics

    Science.gov (United States)

    2015-02-11

    microbial communities: Function, structure and dynamics’, at the Isaac Newton Institute, University of Cambridge, United Kingdom, from August to...dynamics’, at the Isaac Newton Institute, University of Cambridge, United Kingdom, from August to December 2014. The programme involved over 150...Communities: Function, Structure and Dynamics’, at the Isaac Newton Institute, Cambridge University, UK, from 19th August 2014 – 19th December 2014

  2. Structural Dynamic Behavior of Wind Turbines

    Science.gov (United States)

    Thresher, Robert W.; Mirandy, Louis P.; Carne, Thomas G.; Lobitz, Donald W.; James, George H. III

    2009-01-01

    The structural dynamicist s areas of responsibility require interaction with most other members of the wind turbine project team. These responsibilities are to predict structural loads and deflections that will occur over the lifetime of the machine, ensure favorable dynamic responses through appropriate design and operational procedures, evaluate potential design improvements for their impact on dynamic loads and stability, and correlate load and control test data with design predictions. Load prediction has been a major concern in wind turbine designs to date, and it is perhaps the single most important task faced by the structural dynamics engineer. However, even if we were able to predict all loads perfectly, this in itself would not lead to an economic system. Reduction of dynamic loads, not merely a "design to loads" policy, is required to achieve a cost-effective design. The two processes of load prediction and structural design are highly interactive: loads and deflections must be known before designers and stress analysts can perform structural sizing, which in turn influences the loads through changes in stiffness and mass. Structural design identifies "hot spots" (local areas of high stress) that would benefit most from dynamic load alleviation. Convergence of this cycle leads to a turbine structure that is neither under-designed (which may result in structural failure), nor over-designed (which will lead to excessive weight and cost).

  3. Dynamics and acceleration in linear structures

    International Nuclear Information System (INIS)

    Le Duff, J.

    1985-06-01

    Basic methods of linear acceleration are reviewed. Both cases of non relativistic and ultra relativistic particles are considered. Induction linac, radiofrequency quadrupole are mentioned. Fundamental parameters of accelerating structures are recalled; they are transit time factor, shunt impedance, quality factor and stored energy, phase velocity and group velocity, filling time, space harmonics in loaded waveguides. Energy gain in linear accelerating structures is considered through standing wave structures and travelling wave structures. Then particle dynamics in linear accelerators is studied: longitudinal motion, transverse motion and dynamics in RFQ

  4. Structural concerns in dynamic drop loads on transfer lock mechanisms

    International Nuclear Information System (INIS)

    Pfeiffer, P.A.; Moran, T.J.; Kulak, R.F.

    1997-01-01

    Drop loads are usually low probability events that can generate substantial loading to the impacted structures. When the impacted structure contains slender elements, the concern about dynamic buckling must be addressed. The problem of interest here is a structure is also under significant preload, which must be taken into account in the transient analysis. For complex structures, numerical simulations are the only viable option for assessing the transient response to short duration impactive loads. this paper addresses several analysis issues of preloaded structures with slender members subjected to drop loads. A three-dimensional beam element is validated for use in dynamic buckling analysis. the numerical algorithm used to solve the transient response of preloaded structures is discussed. The methodology is applied to an inter-compartment lock that is under significant preloads, and subjected to a drop load

  5. Past and future trends in structures and dynamics

    International Nuclear Information System (INIS)

    Bader, R.M.; Goesch, W.H.; Olsen, J.J.

    1981-01-01

    An historical review and a series of prognostications based on current developments are presented for the fields of structural design and structural dynamics analysis. It is shown that while weight and cost reduction and improved durability have been the primary forces in structural technology development in the past, emphasis has shifted to such things as productivity, quality assurance, low observables for military aircraft and increased fuel efficiency. Prominent among recent advances in future developments are damage tolerance durability, computer-aided design, active flutter suppression, adhesive bonding of primary structures, cast aluminum structures, titanium and graphite-epoxy primary aircraft structures, aeroelastic tailoring composites, metal matrix composites, and radar-absorbing structures

  6. Limitations and corrections in measuring dynamic characteristics of structural systems

    International Nuclear Information System (INIS)

    Walter, P.L.

    1978-10-01

    The work deals with limitations encountered in measuring the dynamic characteristics of structural systems. Structural loading and response are measured by transducers possessing multiple resonant frequencies in their transfer function. In transient environments, the resultant signals from these transducers are shown to be analytically unpredictable in amplitude level and frequency content. Data recorded during nuclear effects simulation testing on structures are analyzed. Results of analysis can be generalized to any structure which encounters dynamic loading. Methods to improve the recorded data are described which can be implemented on a frequency selective basis during the measurement process. These improvements minimize data distortion attributable to the transfer characteristics of the measuring transducers

  7. Dynamic stimulated Brillouin scattering analysis

    DEFF Research Database (Denmark)

    Djupsöbacka, A.; Jacobsen, Gunnar; Tromborg, Bjarne

    2000-01-01

    We present a new simple analysis - including the effect of spontaneous emission - of the (dynamic) influence of SBS on the detected receiver eye diagram. It applies in principle for general types of modulation formats such as the digital formats of ASK, FSK, and PSK. The analysis is formulated fo...

  8. Enabling dynamics in face analysis

    NARCIS (Netherlands)

    Dibeklioğlu, H.

    2014-01-01

    Most of the approaches in automatic face analysis rely solely on static appearance. However, temporal analysis of expressions reveals interesting patterns. For a better understanding of the human face, this thesis focuses on temporal changes in the face, and dynamic patterns of expressions. In

  9. Structure/Function Analysis of Protein-Protein Interactions and Role of Dynamic Motions in Mercuric Ion Reductase

    Energy Technology Data Exchange (ETDEWEB)

    Miller, Susan M.

    2005-05-18

    This report summarizes the activities and findings of our structure/function studies of the bacterial detoxification enzyme mercuric ion reductase. The objectives of the work were to obtain crystal structure information for the catalytic core of this enzyme, use the information to investigate the importance of specific parts of the enzyme to its function, and investigate the role of one domain of the enzyme in its function within cells. We describe the accomplishments towards these goals including many structures of the wild type and mutant forms of the enzyme that highlight its interactions with its Hg(II) substrate, elucidation of the role of the N-terminal domain in vitro and in vivo, and elucidation of the roles of at two conserved residues in the core in the mechanism of catalysis.

  10. The CEASEMT system (Computer analysis of the thermomechanical structure behavior). The TRICO code, for analysis of three-dimensional structures comprising shells and beams - Statics - Dynamics - Elasticity - Plasticity - Buckling - Large displacements

    International Nuclear Information System (INIS)

    1977-01-01

    The TRICO part of the CEA-SEMT system is concerned with the elasticity or plasticity computation of structures made of thin shells and beams. TRICO uses the finite element method for shells and beams. TRICO also allows the dynamic computing of structures: search for eigenmodes and eigenfrequencies or response to any sinusoidal excitation, response to time dependent loads (direct integration) in elasticity or plasticity. The mechanical structures can offer any shape and be composed of a number of materials. A special effort has been put on data input (read without any format), the data being arranged in optional commands with a precise physical sense corresponding to an order for the program. A dynamic control of the memory allows the size of the program to be adapted to that the problem to be processed. Results are printed on listing, or many be described on a magnetic tape [fr

  11. Structure, dynamics, and function of biomolecules

    International Nuclear Information System (INIS)

    Frauenfelder, H.; Berendzen, J.R.; Garcia, A.; Gupta, G.; Olah, G.A.; Terwilliger, T.C.; Trewhella, J.; Wood, C.C.; Woodruff, W.H.

    1998-01-01

    This is the final report of a three-year, Laboratory Directed Research and Development (LDRD) project at the Los Alamos National Laboratory (LANL). The authors enhanced Los Alamos' core competency in Bioscience and Biotechnology by building on present strengths in experimental techniques, theory, high-performance computing, modeling, and simulation applied to biomolecular structure, dynamics, and function. Specifically, the authors strengthened their capabilities in neutron/x-ray scattering, x-ray crystallography, NMR, laser, and optical spectroscopies. Initially they focused on supporting the Los alamos Neutron Science Center (LANSCE) in the design and implementation of new neutron scattering instrumentation, they developed new methods for analysis of scattering data, and they developed new projects to study the structures of biomolecular complexes. The authors have also worked to strengthen interactions between theory and experiment, and between the biological and physical sciences. They sponsored regular meetings of members from all interested LANL technical divisions, and supported two lecture series: ''Biology for Physicists'' and ''Issues in Modern Biology''. They also supported the formation of interdisciplinary/inter-divisional teams to develop projects in science-based bioremediation and an integrated structural biology resource. Finally, they successfully worked with a multidisciplinary team to put forward the Laboratory's Genome and Beyond tactical goal

  12. Computational docking, molecular dynamics simulation and subsite structure analysis of a maltogenic amylase from Bacillus lehensis G1 provide insights into substrate and product specificity.

    Science.gov (United States)

    Manas, Nor Hasmaliana Abdul; Bakar, Farah Diba Abu; Illias, Rosli Md

    2016-06-01

    Maltogenic amylase (MAG1) from Bacillus lehensis G1 displayed the highest hydrolysis activity on β-cyclodextrin (β-CD) to produce maltose as a main product and exhibited high transglycosylation activity on malto-oligosaccharides with polymerization degree of three and above. These substrate and product specificities of MAG1 were elucidated from structural point of view in this study. A three-dimensional structure of MAG1 was constructed using homology modeling. Docking of β-CD and malto-oligosaccharides was then performed in the MAG1 active site. An aromatic platform in the active site was identified which is responsible in substrate recognition especially in determining the enzyme's preference toward β-CD. Molecular dynamics (MD) simulation showed MAG1 structure is most stable when docked with β-CD and least stable when docked with maltose. The docking analysis and MD simulation showed that the main subsites for substrate stabilization in the active site are -2, -1, +1 and +2. A bulky residue, Trp359 at the +2 subsite was identified to cause steric interference to the bound linear malto-oligosaccharides thus prevented it to occupy subsite +3, which can only be reached by a highly bent glucose molecule such as β-CD. The resulted modes of binding from docking simulation show a good correlation with the experimentally determined hydrolysis pattern. The subsite structure generated from this study led to a possible mode of action that revealed how maltose was mainly produced during hydrolysis. Furthermore, maltose only occupies subsite +1 and +2, therefore could not be hydrolyzed or transglycosylated by the enzyme. This important knowledge has paved the way for a novel structure-based molecular design for modulation of its catalytic activities. Copyright © 2016 Elsevier Inc. All rights reserved.

  13. Design optimization applied in structural dynamics

    NARCIS (Netherlands)

    Akcay-Perdahcioglu, Didem; de Boer, Andries; van der Hoogt, Peter; Tiskarna, T

    2007-01-01

    This paper introduces the design optimization strategies, especially for structures which have dynamic constraints. Design optimization involves first the modeling and then the optimization of the problem. Utilizing the Finite Element (FE) model of a structure directly in an optimization process

  14. The Structure and Dynamics of GRB Jets

    Energy Technology Data Exchange (ETDEWEB)

    Granot, Jonathan; /KIPAC, Menlo Park

    2006-10-25

    There are several lines of evidence which suggest that the relativistic outflows in gamma-ray bursts (GRBs) are collimated into narrow jets. The jet structure has important implications for the true energy release and the event rate of GRBs, and can constrain the mechanism responsible for the acceleration and collimation of the jet. Nevertheless, the jet structure and its dynamics as it sweeps up the external medium and decelerates, are not well understood. In this review I discuss our current understanding of GRB jets, stressing their structure and dynamics.

  15. Structural Analysis of Streptococcus pyogenes NADH Oxidase: Conformational Dynamics Involved in Formation of the C(4a)-Peroxyflavin Intermediate.

    Science.gov (United States)

    Wallen, Jamie R; Mallett, T Conn; Okuno, Takashi; Parsonage, Derek; Sakai, Hiroaki; Tsukihara, Tomitake; Claiborne, Al

    2015-11-17

    In probing the oxygen reactivity of an Enterococcus faecalis NADH oxidase (Nox; O2 → 2H2O) C42S mutant lacking the Cys42-sulfenic acid (Cys42-SOH) redox center, we provided direct evidence of a C(4a)-peroxyflavin intermediate in the oxidative half-reaction and also described a conformational or chemical change that is rate-limiting for full reoxidation of the homodimer. In this work, the Nox from Streptococcus pyogenes (SpyNox) has been expressed and crystallized, and the overoxidized wild-type [Cys44-SOH → Cys44-sulfinic acid (Cys44-SO2H)] and C44S mutant enzyme structures have been refined at 2.0 and 2.15 Å, respectively. We show that azide binds to the two-electron reduced wild-type (EH2) enzyme and to the mutant enzyme in solution, but with a significantly higher affinity for the mutant protein. The spectral course of the titration with the SpyNox EH2 form clearly indicates progressive displacement of the Cys44-S(-) → FAD charge-transfer interaction. An azide soak with C44S Nox crystals led to the structure of the complex, as refined at 2.10 Å. The active-site N3(-) ligand is proximal to the Ser44 and His11 side chains, and a significant shift in the Ser44 side chain also appears. This provides an attractive explanation for the azide-induced loss of charge-transfer absorbance seen with the wild-type EH2 form and also permits accommodation of a C(4a)-peroxyflavin structural model. The conformation of Ser44 and the associated helical element, and the resulting steric accommodation, appear to be linked to the conformational change described in the E. faecalis C42S Nox oxidative half-reaction.

  16. Evaluation of Nanomaterial Approaches to Damping in Epoxy Resin and Carbon Fiber/Epoxy Composite Structures by Dynamic Mechanical Analysis

    Science.gov (United States)

    Miller, G.; Heimann, Paula J.; Scheiman, Daniel A.; Duffy, Kirsten P.; Johnston, J. Chris; Roberts, Gary D.

    2013-01-01

    Vibration mitigation in composite structures has been demonstrated through widely varying methods which include both active and passive damping. Recently, nanomaterials have been investigated as a viable approach to composite vibration damping due to the large surface available to generate energy dissipation through friction. This work evaluates the influence of dispersed nanoparticles on the damping ratio of an epoxy matrix. Limited benefit was observed through dispersion methods, however nanoparticle application as a coating resulting in up to a three-fold increase in damping.

  17. Structural analysis of DAEs

    DEFF Research Database (Denmark)

    Poulsen, Mikael Zebbelin

    2002-01-01

    , by the implementation of the Simpy tool box. This is an object oriented system implemented in the Python language. It can be used for analysis of DAEs, ODEs and non-linear equation and uses e.g. symbolic representations of expressions and equations. The presentations of theory and algorithms for structural index...... analysis of DAE is original in the sense that it is based on a new matrix representation of the structural information of a general DAE system instead of a graph oriented representation. Also the presentation of the theory is found to be more complete compared to other presentations, since it e.g. proves....... The methodology is mainly based on strutural index analysis which is not limited by the index of the DAE as other methodologies. As a result of structural index analysis one can perform index reduction of the DAE and obtain the so-called augmented underlying ODE. It is also described, how to use the augmented...

  18. Dynamic Structural Health Monitoring of Slender Structures Using Optical Sensors

    Science.gov (United States)

    Antunes, Paulo; Travanca, Rui; Rodrigues, Hugo; Melo, José; Jara, José; Varum, Humberto; André, Paulo

    2012-01-01

    In this paper we summarize the research activities at the Instituto de Telecomunicações—Pólo de Aveiro and University of Aveiro, in the field of fiber Bragg grating based sensors and their applications in dynamic measurements for Structural Health Monitoring of slender structures such as towers. In this work we describe the implementation of an optical biaxial accelerometer based on fiber Bragg gratings inscribed on optical fibers. The proof-of-concept was done with the dynamic monitoring of a reinforced concrete structure and a slender metallic telecommunication tower. Those structures were found to be suitable to demonstrate the feasibility of FBG accelerometers to obtain the structures' natural frequencies, which are the key parameters in Structural Health Monitoring and in the calibration of numerical models used to simulate the structure behavior. PMID:22778661

  19. MULTISCALE DYNAMICS OF SOLAR MAGNETIC STRUCTURES

    International Nuclear Information System (INIS)

    Uritsky, Vadim M.; Davila, Joseph M.

    2012-01-01

    Multiscale topological complexity of the solar magnetic field is among the primary factors controlling energy release in the corona, including associated processes in the photospheric and chromospheric boundaries. We present a new approach for analyzing multiscale behavior of the photospheric magnetic flux underlying these dynamics as depicted by a sequence of high-resolution solar magnetograms. The approach involves two basic processing steps: (1) identification of timing and location of magnetic flux origin and demise events (as defined by DeForest et al.) by tracking spatiotemporal evolution of unipolar and bipolar photospheric regions, and (2) analysis of collective behavior of the detected magnetic events using a generalized version of the Grassberger-Procaccia correlation integral algorithm. The scale-free nature of the developed algorithms makes it possible to characterize the dynamics of the photospheric network across a wide range of distances and relaxation times. Three types of photospheric conditions are considered to test the method: a quiet photosphere, a solar active region (NOAA 10365) in a quiescent non-flaring state, and the same active region during a period of M-class flares. The results obtained show (1) the presence of a topologically complex asymmetrically fragmented magnetic network in the quiet photosphere driven by meso- and supergranulation, (2) the formation of non-potential magnetic structures with complex polarity separation lines inside the active region, and (3) statistical signatures of canceling bipolar magnetic structures coinciding with flaring activity in the active region. Each of these effects can represent an unstable magnetic configuration acting as an energy source for coronal dissipation and heating.

  20. Effect of support conditions on structural response under dynamic loading

    International Nuclear Information System (INIS)

    Akram, T.; Memon, S.A.

    2008-01-01

    In design practice, dynamic structural analysis is carried out with base of structure considered as fixed; this means that foundation is placed on rock like soil material. While conducting this type of analyses the role of foundation and soil behaviour is totally neglected. The actions in members and loads transferred at foundation level obtained in this manner do not depict the true structural behaviour. FEM (Finite Element Methods) analysis where both superstructure and foundation soil are coupled together is quite complicated and expensive for design environments. A simplified model is required to depict dynamic response of structures with foundations based on flexible soils. The primary purpose of this research is to compare the superstructure dynamic responses of structural systems with fixed base to that of simple soil model base. The selected simple soil model is to be suitable for use in a design environment to give more realistic results. For this purpose building models are idealized with various heights and structural systems in both 2D (Two Dimensional) and 3D (Three Dimensional) space. These models are then provided with visco-elastic supports representing three soil bearing capacities and the analysis results are compared to that of fixed supports models. The results indicate that fixed support system underestimates natural time period of the structures. Dynamic behavior and force response of visco-elastic support is different from fixed support model. Fixed support models result in over designed base columns and under designed beams. (author)

  1. An application of methods of factor analysis in the assessment of status and dynamics of the age structure of the population of the republic of Belarus

    OpenAIRE

    Sharilova, Y. Y.

    2013-01-01

    Identified the main problems of statistical study of the age structure of the population. Considered an application of multivariate factor analysis in the assessment of status and dinamics of the age structure of the population.

  2. Static Analysis for Dynamic XML

    DEFF Research Database (Denmark)

    Christensen, Aske Simon; Møller, Anders; Schwartzbach, Michael Ignatieff

    2002-01-01

    We describe the summary graph lattice for dataflow analysis of programs that dynamically construct XML documents. Summary graphs have successfully been used to provide static guarantees in the JWIG language for programming interactive Web services. In particular, the JWIG compiler is able to check...

  3. Analysis of truck platoon dynamics

    NARCIS (Netherlands)

    Verhoeff, L.; Zuurbier, J.; Lupker, H.A.

    1999-01-01

    This paper presents the analysis of truck platoon dynamics using a simulation environment. In this case the platoon consists of a number of trucks following each other using driver algorithms. MADYMO (a multibody and FE software package) and MATLAB/SIMULINK are coupled to allow for these driver

  4. About the dynamics of structural phase transitions

    International Nuclear Information System (INIS)

    Medeiros, J.T.N.

    1975-01-01

    The dynamics of structural phase transitions with a fourth order interaction between the soft phonon fields is studied in the 1/n approximation, using many body methods at finite temperatures. Two limits are considered: high transition temperature T sub(c) (classical limit) and T sub(c) = 0 (quantum limit). The dynamical contribution to the critical coefficient eta of the correlation function is calculated in these limits. It is found that there is no dynamical contribution to eta in the classical limit, whereas in the quantum limit eta is non-zero only for dimensions of the system d [pt

  5. Strength of concrete structures under dynamic loading

    Science.gov (United States)

    Kumpyak, O. G.; Galyautdinov, Z. R.; Kokorin, D. N.

    2016-01-01

    The use of elastic supports is one the efficient methods of decreasing the dynamic loading. The paper describes the influence of elastic supports on the stress-strain state of steel concrete structures exposed to one-time dynamic loading resulting in failure. Oblique bending beams on elastic supports and their elastic, elastoplastic, and elastoplastic consolidation behavior are considered in this paper. For numerical calculations the developed computer program is used based on the finite element method. Research findings prove high efficiency of elastic supports under dynamic loading conditions. The most effective behavior of elastic supports is demonstrated at the elastoplastic stage. A good agreement is observed between the theoretical and experimental results.

  6. Dynamics Analysis of Fluid-Structure Interaction for a Biologically-Inspired Biped Robot Running on Water

    Directory of Open Access Journals (Sweden)

    Linsen Xu

    2013-10-01

    Full Text Available A kinematics analysis of a biologically-inspired biped robot is carried out, and the trajectory of the robot foot is understood. For calculating the pressure distribution across a robot foot before touching the surface of water, the compression flow of air and the depression motion of the water surface are considered. The pressure model after touching the water surface has been built according to the theory of rigid body planar motion. The multi-material ALE algorithm is applied to emulate the course of the foot slapping water. The simulation results indicate that the model of the bionic robot can satisfy the water-running function. The real prototype of the robot is manufactured to test its function of running on water. When the biped robot is running on water, the average force generated by the propulsion mechanism is about 1.3N. The experimental results show that the propulsion system can satisfy the requirement of biped robot running on water.

  7. Structural dynamics of electronic and photonic systems

    CERN Document Server

    Suhir, Ephraim; Steinberg, David S

    2011-01-01

    The proposed book will offer comprehensive and versatile methodologies and recommendations on how to determine dynamic characteristics of typical micro- and opto-electronic structural elements (printed circuit boards, solder joints, heavy devices, etc.) and how to design a viable and reliable structure that would be able to withstand high-level dynamic loading. Particular attention will be given to portable devices and systems designed for operation in harsh environments (such as automotive, aerospace, military, etc.)  In-depth discussion from a mechanical engineer's viewpoint will be conducte

  8. Chemical structure and dynamics: Annual report 1993

    Energy Technology Data Exchange (ETDEWEB)

    Colson, S.D.

    1994-07-01

    The Chemical Structure and Dynamics program responds to the need for a fundamental, molecular-level understanding of chemistry at the wide variety of environmentally-important interfaces. The research program is built around the established relationship between structure, thermodynamics, and kinetics. This research effort continues to evolve into a program of rigorous studies of fundamental molecular processes in model systems (e.g., well-characterized surfaces, single-component solutions, clusters, and biological molecules), and studies of complex systems found in the environment. Experimental studies of molecular and supramolecular structures and thermodynamics are key to understanding the nature of matter, and lead to direct comparison with computational results. Kinetic and mechanistic measurements, combined with real-time dynamics measurements of atomic and molecular motions during chemical reactions, provide for a molecular-level description of chemical reactions. The anticipated results of this work are the achievement of a quantitative understanding of chemical processes at complex interfaces, the development of new techniques for the detection and measurement of species at such interfaces, and the interpretation and extrapolation of the observations in terms of models of interfacial chemistry. The Chemical Structure and Dynamics research program includes five areas described in detail in this report: Reaction mechanisms at solid interfaces; Solution and solution interfaces; Structure and dynamics of biological systems; Analytical methods development; and atmospheric chemistry. Extended abstracts are presented for 23 studies.

  9. Presurgical localization of abnormal parathyroid glands using a single injection of technetium-99m methoxyisobutylisonitrile: comparison of different techniques including factor analysis of dynamic structures

    Energy Technology Data Exchange (ETDEWEB)

    Blocklet, D. [Hopital Universitaire Erasme, Univ. Libre de Bruxelles (Belgium); Martin, P. [Hopital Universitaire Brugmann, Univ. Libre de Bruxelles (Belgium); Schoutens, A. [Hopital Universitaire Erasme, Univ. Libre de Bruxelles (Belgium); Verhas, M. [Hopital Universitaire Brugmann, Univ. Libre de Bruxelles (Belgium); Hooghe, L. [Hopital Universitaire Brugmann, Univ. Libre de Bruxelles (Belgium); Kinnaert, P. [Hopital Universitaire Erasme, Univ. Libre de Bruxelles (Belgium)

    1997-01-01

    The aims of this study were to determine which of the analytical techniques described for this method time-activity curves analysis of dynamic structures corresponds best with surgical findings, and to ascertain the potential overall contribution of presurgical scintigraphy. 55P patients were studied, 34 of whom presented with primary hyperparathyroidism (HPT) and 21 with secondary HPT. After a 925 MBq injection of technetium-99m MIBI, a 40-min dynamic acquisition was performed and static images were acquired at 5, 20, 40 and 120 min using a gamma camera equipped with a pinhole collimator. Sensitivity was 84.4%, 74% and 65% in adenoma and 76%, 66.6% and 45% in hyperplasia for 15`-120`, FADS and TACs, respectively. Surgical accuracy was 72%, 56% and 59% in adenoma and 53%, 30% and 22% in hyperplasia for 15`-120`, FADS and TACs, respectively. The visual comparison method scored best in all cases. FADS was found to be sensitive in cases of adenoma but was handicapped by more false-positive localizations. TACs were particular inefficient in hyperplasia. With respect to the detection of adenomas, we found a relationship between the gland weight and scintigraphic positivity. This dependence was not found in hyperplasia. The poorer results obtained with all techniques for surgical accuracy can be explained by the need for a complete scintigraphic description of all pathological glands found by the surgeon in a patient. This study demonstrates that the 15`-120` visual comparison method is more efficient However, it was less efficient than neck exploration by an experienced surgeon. (orig./ vhe) (orig.). With 4 figs., 4 tabs.

  10. Interplay of Structure and Dynamics in Biomaterials

    Science.gov (United States)

    Vodnala, Preeti

    Study of structure and dynamic behavior is essential to understand molecular motions in biological systems. In this work, two biomaterials were studied to address membrane properties and protein diffusion. For the first project, we studied the structure of liposomes, artificial vesicles that are used for drug encapsulation and administration of pharmaceuticals or cellular nutrients. Small-angle x-ray scattering (SAXS) was used to determine the structural properties of different liposomes composed of egg-PC and cholesterol bilayer. We examined the location of cholesterol by labelling cholesterol with bromine molecule and reveal that cholesterol is located one side of the leaflet adjusting itself to the curvature of a liposome. In my second project, we studied the dynamics of concentrated suspensions of alpha crystallin, one of the most abundant proteins in the human eye lens using X-ray photon correlation spectroscopy (XPCS). An improved understanding of dynamics could point the way towards treatments presbyopia and cataract. The dynamics were measured at volume fraction close to the critical volume fraction for the glass transition, where the intermediate scattering function, ƒ(q,T) could be well fit using a double exponential decay. The measured relaxation is in reasonable agreement with published molecular dynamics simulations for the relaxation times of hard-sphere colloids.

  11. Ergodic Theory, Open Dynamics, and Coherent Structures

    CERN Document Server

    Bose, Christopher; Froyland, Gary

    2014-01-01

    This book is comprised of selected research articles developed from a workshop on Ergodic Theory, Probabilistic Methods and Applications, held in April 2012 at the Banff International Research Station. It contains contributions from world leading experts in ergodic theory, dynamical systems, numerical analysis, fluid dynamics, and networks. The volume will serve as a valuable reference for mathematicians, physicists, engineers, physical oceanographers, atmospheric scientists, biologists, and climate scientists, who currently use, or wish to learn how to use, probabilistic techniques to cope with dynamical models that display open, coherent, or non-equilibrium behavior.

  12. Variable Dynamic Testbed Vehicle: Dynamics Analysis

    Science.gov (United States)

    Lee, A. Y.; Le, N. T.; Marriott, A. T.

    1997-01-01

    The Variable Dynamic Testbed Vehicle (VDTV) concept has been proposed as a tool to evaluate collision avoidance systems and to perform driving-related human factors research. The goal of this study is to analytically investigate to what extent a VDTV with adjustable front and rear anti-roll bar stiffnesses, programmable damping rates, and four-wheel-steering can emulate the lateral dynamics of a broad range of passenger vehicles.

  13. COI Structural Analysis Presentation

    Science.gov (United States)

    Cline, Todd; Stahl, H. Philip (Technical Monitor)

    2001-01-01

    This report discusses the structural analysis of the Next Generation Space Telescope Mirror System Demonstrator (NMSD) developed by Composite Optics Incorporated (COI) in support of the Next Generation Space Telescope (NGST) project. The mirror was submitted to Marshall Space Flight Center (MSFC) for cryogenic testing and evaluation. Once at MSFC, the mirror was lowered to approximately 40 K and the optical surface distortions were measured. Alongside this experiment, an analytical model was developed and used to compare to the test results. A NASTRAN finite element model was provided by COI and a thermal model was developed from it. Using the thermal model, steady state nodal temperatures were calculated based on the predicted environment of the large cryogenic test chamber at MSFC. This temperature distribution was applied in the structural analysis to solve for the deflections of the optical surface. Finally, these deflections were submitted for optical analysis and comparison to the interferometer test data.

  14. Natural Poisson structures of nonlinear plasma dynamics

    International Nuclear Information System (INIS)

    Kaufman, A.N.

    1982-06-01

    Hamiltonian field theories, for models of nonlinear plasma dynamics, require a Poisson bracket structure for functionals of the field variables. These are presented, applied, and derived for several sets of field variables: coherent waves, incoherent waves, particle distributions, and multifluid electrodynamics. Parametric coupling of waves and plasma yields concise expressions for ponderomotive effects (in kinetic and fluid models) and for induced scattering

  15. Natural Poisson structures of nonlinear plasma dynamics

    International Nuclear Information System (INIS)

    Kaufman, A.N.

    1982-01-01

    Hamiltonian field theories, for models of nonlinear plasma dynamics, require a Poisson bracket structure for functionals of the field variables. These are presented, applied, and derived for several sets of field variables: coherent waves, incoherent waves, particle distributions, and multifluid electrodynamics. Parametric coupling of waves and plasma yields concise expressions for ponderomotive effects (in kinetic and fluid models) and for induced scattering. (Auth.)

  16. Structure and dynamics of the solar chromosphere

    NARCIS (Netherlands)

    Krijger, Johannes Mattheus

    2002-01-01

    The thesis "Structure and dynamics of the solar chromosphere" of J.M. Krijger is a study on the behavior of the solar chromosphere, the thin layer just above the solar surface (photosphere) visible in purple red light during a total solar eclipse. The most important result of this thesis is that the

  17. The Liquid State Its Structure and Dynamics

    Indian Academy of Sciences (India)

    Home; Journals; Resonance – Journal of Science Education; Volume 2; Issue 8. The Liquid State Its Structure and Dynamics. K R Rao. General Article Volume 2 Issue 8 August 1997 pp 26-31 ... Author Affiliations. K R Rao1. 'Gokula', 29/2, 11th Cross Road, 3rd Main, Margosa Road, Malleswaram, Bangalore 560 003, India ...

  18. DYNAMICS OF STRUCTURE - AN INDIVIDUAL ORIENTED APPROACH

    NARCIS (Netherlands)

    ZEGGELINK, E

    1994-01-01

    The dynamics of network structure are considered, here as a consequence of individual choices with regard to relationships. We introduce the individual- or object-oriented modelling approach to model social networks. Object-oriented model building is based on acting so-called 'objects',

  19. Analysis of Nonlinear Dynamic Structures

    African Journals Online (AJOL)

    Bheema

    work a two degrees of freedom nonlinear system with zero memory was simulated, modeled and analyzed to show ... polynomial stiffness and damping, clearance, impacts, friction and saturation effect (Worden and. Tomlinson ..... one frequency as shown for the regions of green and red colors or around the tip of the curved.

  20. Dynamic Analysis of a Pendulum Dynamic Automatic Balancer

    Directory of Open Access Journals (Sweden)

    Jin-Seung Sohn

    2007-01-01

    Full Text Available The automatic dynamic balancer is a device to reduce the vibration from unbalanced mass of rotors. Instead of considering prevailing ball automatic dynamic balancer, pendulum automatic dynamic balancer is analyzed. For the analysis of dynamic stability and behavior, the nonlinear equations of motion for a system are derived with respect to polar coordinates by the Lagrange's equations. The perturbation method is applied to investigate the dynamic behavior of the system around the equilibrium position. Based on the linearized equations, the dynamic stability of the system around the equilibrium positions is investigated by the eigenvalue analysis.

  1. Proteins with Novel Structure, Function and Dynamics

    Science.gov (United States)

    Pohorille, Andrew

    2014-01-01

    Recently, a small enzyme that ligates two RNA fragments with the rate of 10(exp 6) above background was evolved in vitro (Seelig and Szostak, Nature 448:828-831, 2007). This enzyme does not resemble any contemporary protein (Chao et al., Nature Chem. Biol. 9:81-83, 2013). It consists of a dynamic, catalytic loop, a small, rigid core containing two zinc ions coordinated by neighboring amino acids, and two highly flexible tails that might be unimportant for protein function. In contrast to other proteins, this enzyme does not contain ordered secondary structure elements, such as alpha-helix or beta-sheet. The loop is kept together by just two interactions of a charged residue and a histidine with a zinc ion, which they coordinate on the opposite side of the loop. Such structure appears to be very fragile. Surprisingly, computer simulations indicate otherwise. As the coordinating, charged residue is mutated to alanine, another, nearby charged residue takes its place, thus keeping the structure nearly intact. If this residue is also substituted by alanine a salt bridge involving two other, charged residues on the opposite sides of the loop keeps the loop in place. These adjustments are facilitated by high flexibility of the protein. Computational predictions have been confirmed experimentally, as both mutants retain full activity and overall structure. These results challenge our notions about what is required for protein activity and about the relationship between protein dynamics, stability and robustness. We hypothesize that small, highly dynamic proteins could be both active and fault tolerant in ways that many other proteins are not, i.e. they can adjust to retain their structure and activity even if subjected to mutations in structurally critical regions. This opens the doors for designing proteins with novel functions, structures and dynamics that have not been yet considered.

  2. Ab initio molecular dynamics study of ethylene adsorption onto Si(001) surface: short-time Fourier transform analysis of structural coordinate autocorrelation function.

    Science.gov (United States)

    Lee, Yung Ting; Lin, Jyh Shing

    2013-12-05

    The reaction dynamics of ethylene adsorption onto the Si(001) surface have been studied by combining density functional theory-based molecular dynamics simulations with molecular adsorption sampling scheme for investigating all kinds of reaction pathways and corresponding populations. Based on the calculated results, three possible reaction pathways--the indirect adsorption, the direct adsorption, and the repelling reaction--have been found. First, the indirect adsorption, in which the ethylene (C2H(4(ads))) forms the π-bonded C2H(4(ads)) with the buckled-down Si atom to adsorb on the Si(001) surface and then turns into the di-σ-bonded C2H(4(ads)), is the major reaction pathway. The short-time Fourier transform analysis of structural coordinate autocorrelation function is performed to further investigate the evolution of different vibrational modes along this indirect reaction pathway. This analysis illustrates that the Infrared (IR) inactive peak of the C=C stretching mode of the π-bonded C2 H4(ads) shifts to the IR inactive peak of the C-C stretching mode of di-σ-bonded C2H(4(ads)), which is in a good agreement with the IR inactive peak of the C=C stretching mode vanished in the vibrational spectrum at 150 K (Nagao et al., J. Am. Chem. Soc. 2004, 126, 9922). Second, the direct adsorption, in which the di-σ-bonded C2H(4(ads)) is formed directly with the Si intradimer or the Si interdimer on the Si(001) surface, is the less significant reaction pathway. This reaction pathway leads to the C-C stretching mode and the C-H stretching mode of the di-σ-bonded C2H(4(ads)) appeared in the vibrational spectra at 48 and 150 K, respectively (Nagao et al., J. Am. Chem. Soc. 2004, 126, 9922). Finally, the repelling reaction, in which the C2H(4(g)) first interacts with the Si dimer and then is repelled by Si atoms, is the least important reaction pathway. Consequently, neither the π-bonded C2H(4(ads)) nor the di-σ-bonded C2H(4(ads)) is formed on the Si(001) surface

  3. Dynamic object management for distributed data structures

    Science.gov (United States)

    Totty, Brian K.; Reed, Daniel A.

    1992-01-01

    In distributed-memory multiprocessors, remote memory accesses incur larger delays than local accesses. Hence, insightful allocation and access of distributed data can yield substantial performance gains. The authors argue for the use of dynamic data management policies encapsulated within individual distributed data structures. Distributed data structures offer performance, flexibility, abstraction, and system independence. This approach is supported by data from a trace-driven simulation study of parallel scientific benchmarks. Experimental data on memory locality, message count, message volume, and communication delay suggest that data-structure-specific data management is superior to a single, system-imposed policy.

  4. Ultrafast structural dynamics of VO2

    Science.gov (United States)

    Lysenko, Sergiy; Kumar, Nardeep; Rúa, Armando; Figueroa, José; Lu, Junqiang; Fernández, Félix

    2017-08-01

    Distinct contribution of acoustic and optical phonons in light-induced lattice transformation was resolved at different time scales by monitoring the insulator-to-metal phase transition in epitaxial and nonepitaxial VO2 films. Applying the ultrafast angle-resolved light scattering technique we demonstrate a significant influence of internal misfit strain in epitaxial films on subpicosecond phase transition dynamics. This technique also allows for observing a contribution of structural defects in the evolution of the transient state. The ultrafast structural phase transition dynamics is discussed in terms of the Ginzburg-Landau formalism. Using a set of experimental data we reconstruct the thermodynamic potential of photoexcited VO2 and provide a phenomenological model of the ultrafast light-induced structural phase transition.

  5. Complex dynamics of text analysis

    Science.gov (United States)

    Ke, Xiaohua; Zeng, Yongqiang; Ma, Qinghua; Zhu, Lin

    2014-12-01

    This paper presents a novel method for the analysis of nonlinear text quality in Chinese language. Texts produced by university students in China were represented as scale-free networks (word adjacency model), from which typical network features such as the in/outdegree, clustering coefficient and network dynamics were obtained. The method integrates the classical concepts of network feature representation and text quality series variation. The analytical and numerical scheme leads to a parameter space representation that constitutes a valid alternative to represent the network features. The results reveal that complex network features of different text qualities can be clearly revealed and applied to potential applications in other instances of text analysis.

  6. 32nd IMAC Conference and Exposition on Structural Dynamics

    CERN Document Server

    Mayes, Randy; Rixen, Daniel; Catbas, Fikret; Atamturktur, H; Moaveni, Babak; Papadimitriou, Costas; Schoenherr, Tyler; Foss, Gary; Niezrecki, Christopher; Allemang, Randall; Kerschen, Gaetan

    2014-01-01

    This critical collection examines a range of topics in modal analysis, from experimental techniques to acoustics to biodynamics,  as presented in early findings and case studies from the Proceedings of the 32nd IMAC, A Conference and Exposition on Structural Dynamics, 2014. The collection includes papers in the following general technical research areas: Experimental Techniques, Processing Modal Data, Rotating Machinery, Acoustics, Adaptive Structures, Biodynamics, Damping

  7. Dynamic structural disorder in supported nanoscale catalysts

    International Nuclear Information System (INIS)

    Rehr, J. J.; Vila, F. D.

    2014-01-01

    We investigate the origin and physical effects of “dynamic structural disorder” (DSD) in supported nano-scale catalysts. DSD refers to the intrinsic fluctuating, inhomogeneous structure of such nano-scale systems. In contrast to bulk materials, nano-scale systems exhibit substantial fluctuations in structure, charge, temperature, and other quantities, as well as large surface effects. The DSD is driven largely by the stochastic librational motion of the center of mass and fluxional bonding at the nanoparticle surface due to thermal coupling with the substrate. Our approach for calculating and understanding DSD is based on a combination of real-time density functional theory/molecular dynamics simulations, transient coupled-oscillator models, and statistical mechanics. This approach treats thermal and dynamic effects over multiple time-scales, and includes bond-stretching and -bending vibrations, and transient tethering to the substrate at longer ps time-scales. Potential effects on the catalytic properties of these clusters are briefly explored. Model calculations of molecule-cluster interactions and molecular dissociation reaction paths are presented in which the reactant molecules are adsorbed on the surface of dynamically sampled clusters. This model suggests that DSD can affect both the prefactors and distribution of energy barriers in reaction rates, and thus can significantly affect catalytic activity at the nano-scale

  8. Dynamic soil-structure interactions on embedded buildings

    International Nuclear Information System (INIS)

    Kobarg, J.; Werkle, H.; Henseleit, O.

    1983-01-01

    The dynamic soil-structure interaction on the horizontal seismic excitation is investigated on two typical embedded auxiliary buildings of a nuclear power plant. The structure and the soil are modelled by various analytical and numerical methods. Under the condition of the linear viscoelastic theory, i.e. soil characteristic constant in time and independent of strain, the interaction influences between a homogenous soil layer and a structure are analysied for the following parameters: 4) mathematical soil modells; 4) mathematical structure modells; 4) shear wave velocities; 3) embedment conditions; 4) earthquake time histories. (orig.) [de

  9. Information diversity in structure and dynamics of simulated neuronal networks.

    Science.gov (United States)

    Mäki-Marttunen, Tuomo; Aćimović, Jugoslava; Nykter, Matti; Kesseli, Juha; Ruohonen, Keijo; Yli-Harja, Olli; Linne, Marja-Leena

    2011-01-01

    Neuronal networks exhibit a wide diversity of structures, which contributes to the diversity of the dynamics therein. The presented work applies an information theoretic framework to simultaneously analyze structure and dynamics in neuronal networks. Information diversity within the structure and dynamics of a neuronal network is studied using the normalized compression distance. To describe the structure, a scheme for generating distance-dependent networks with identical in-degree distribution but variable strength of dependence on distance is presented. The resulting network structure classes possess differing path length and clustering coefficient distributions. In parallel, comparable realistic neuronal networks are generated with NETMORPH simulator and similar analysis is done on them. To describe the dynamics, network spike trains are simulated using different network structures and their bursting behaviors are analyzed. For the simulation of the network activity the Izhikevich model of spiking neurons is used together with the Tsodyks model of dynamical synapses. We show that the structure of the simulated neuronal networks affects the spontaneous bursting activity when measured with bursting frequency and a set of intraburst measures: the more locally connected networks produce more and longer bursts than the more random networks. The information diversity of the structure of a network is greatest in the most locally connected networks, smallest in random networks, and somewhere in between in the networks between order and disorder. As for the dynamics, the most locally connected networks and some of the in-between networks produce the most complex intraburst spike trains. The same result also holds for sparser of the two considered network densities in the case of full spike trains.

  10. In situ structure and dynamics of DNA origami determined through molecular dynamics simulations.

    Science.gov (United States)

    Yoo, Jejoong; Aksimentiev, Aleksei

    2013-12-10

    The DNA origami method permits folding of long single-stranded DNA into complex 3D structures with subnanometer precision. Transmission electron microscopy, atomic force microscopy, and recently cryo-EM tomography have been used to characterize the properties of such DNA origami objects, however their microscopic structures and dynamics have remained unknown. Here, we report the results of all-atom molecular dynamics simulations that characterized the structural and mechanical properties of DNA origami objects in unprecedented microscopic detail. When simulated in an aqueous environment, the structures of DNA origami objects depart from their idealized targets as a result of steric, electrostatic, and solvent-mediated forces. Whereas the global structural features of such relaxed conformations conform to the target designs, local deformations are abundant and vary in magnitude along the structures. In contrast to their free-solution conformation, the Holliday junctions in the DNA origami structures adopt a left-handed antiparallel conformation. We find the DNA origami structures undergo considerable temporal fluctuations on both local and global scales. Analysis of such structural fluctuations reveals the local mechanical properties of the DNA origami objects. The lattice type of the structures considerably affects global mechanical properties such as bending rigidity. Our study demonstrates the potential of all-atom molecular dynamics simulations to play a considerable role in future development of the DNA origami field by providing accurate, quantitative assessment of local and global structural and mechanical properties of DNA origami objects.

  11. Advancement and testing of analysis techniques for the determination of the structural dynamic behavior of containment structures. Final report; Weiterentwicklung und Erprobung von Analysemethoden zur Bestimmung des strukturdynamischen Verhaltens von Containmentstukturen. Abschlussbericht

    Energy Technology Data Exchange (ETDEWEB)

    Sievers, Juergen; Bahr, Ludwig; Arndt, Jens; Heckoetter, Christian; Grebner, Hans

    2014-11-15

    Within the framework of project RS1197, analysis methods have been further developed and tested for the determination of the structural dynamic loading and the maximum load-bearing capacity of containment structures with a focus on the quantification of safety margins against failures due to loads resulting from selected internal and external hazards. The analyses comprised a model containment structure of prestressed reinforced concrete under internal pressure loading until reaching failure pressure, an outer containment structure made of reinforced concrete under local impact loads that may occur during a targeted aircraft crash, and a steel containment under local peak loads from internal pressure and temperature loads due to core melt scenarios with a local hydrogen combustion. GRS participated in the international ''Standard Problem Exercise 3'' on the issue ''Performance of Containment Vessel under Severe Accident Conditions''. Together with the cooperation partners, aspects of the global containment behaviour were considered based on the example of the Sandia 1:4 model containment of prestressed concrete, which was loaded by rising internal pressure until failure. Complex analysis models were developed, calculating the behaviour of the prestressing tendons under consideration of the frictional contact with the cladding tubes. Compared with corresponding measurement values, the analysis results show that the stresses near the tensioning device and the deformation of the inner surface can be realistically modelled as a function of the internal pressure. In the experiment, global structural failure of the containment model was caused by tendon rupture at about 3.64 times the design pressure. With the developed analysis models of a generic structure of an outer reinforced concrete containment, simulations were carried out for various aircraft crash scenarios as contact problems with explicit impactor simulation. For this

  12. Substitution dynamical systems spectral analysis

    CERN Document Server

    Queffélec, Martine

    2010-01-01

    This volume mainly deals with the dynamics of finitely valued sequences, and more specifically, of sequences generated by substitutions and automata. Those sequences demonstrate fairly simple combinatorical and arithmetical properties and naturally appear in various domains. As the title suggests, the aim of the initial version of this book was the spectral study of the associated dynamical systems: the first chapters consisted in a detailed introduction to the mathematical notions involved, and the description of the spectral invariants followed in the closing chapters. This approach, combined with new material added to the new edition, results in a nearly self-contained book on the subject. New tools - which have also proven helpful in other contexts - had to be developed for this study. Moreover, its findings can be concretely applied, the method providing an algorithm to exhibit the spectral measures and the spectral multiplicity, as is demonstrated in several examples. Beyond this advanced analysis, many...

  13. Yaw control for active damping of structural dynamics

    Energy Technology Data Exchange (ETDEWEB)

    Ekelund, T. [Chalmers Univ. of Technology, Goeteborg (Sweden). Control Engineering Lab.

    1996-12-01

    Yaw torque control for reduction of structural dynamic loads in a two-bladed wind turbine is investigated. The models are obtained using rigid-body mechanics. Linear quadratic control theory is utilized for design and analysis. The analysis of two simple examples, where the teeter angle and the tower lateral bending motion are regarded, shows that a time-varying controller has some advantages compared with a time-invariant controller. 6 refs, 9 figs

  14. Sierra Structural Dynamics User's Notes

    Energy Technology Data Exchange (ETDEWEB)

    Reese, Garth M. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)

    2015-10-19

    Sierra/SD provides a massively parallel implementation of structural dynamics finite element analysis, required for high fidelity, validated models used in modal, vibration, static and shock analysis of weapons systems. This document provides a users guide to the input for Sierra/SD. Details of input specifications for the different solution types, output options, element types and parameters are included. The appendices contain detailed examples, and instructions for running the software on parallel platforms.

  15. Analysis of structure and vibrational dynamics of the BeTe(001) surface using X-ray diffraction, Raman spectroscopy, and density functional theory

    DEFF Research Database (Denmark)

    Kumpf, C.; Müller, A.; Weigand, W.

    2003-01-01

    The atomic structure and lattice dynamics of epitaxial BeTe(001) thin films are derived from surface x-ray diffraction and Raman spectroscopy. On the Te-rich BeTe(001) surface [1 (1) over bar0]-oriented Te dimers are identified. They cause a (2 X 1) superstructure and induce a pronounced buckling...... geometry and the vibration modes are in very good agreement with the results of density functional theory calculations....

  16. Chemical structure and dynamics: Annual report 1996

    International Nuclear Information System (INIS)

    Colson, S.D.; McDowell, R.S.

    1997-03-01

    The Chemical Structure and Dynamics (CS ampersand D) program is a major component of the William R. Wiley Environmental Molecular Sciences Laboratory (EMSL) developed by Pacific Northwest National Laboratory (PNNL) to provide a state-of-the-art collaborative facility for studies of chemical structure and dynamics. We respond to the need for a fundamental, molecular-level understanding of chemistry at a wide variety of environmentally important interfaces by (1) extending the experimental characterization and theoretical description of chemical reactions to encompass the effects of condensed media and interfaces; (2) developing a multidisciplinary capability for describing interfacial chemical processes within which the new knowledge generated can be brought to bear on complex phenomena in environmental chemistry and in nuclear waste processing and storage; and (3) developing state-of-the-art analytical methods for characterizing waste tanks and pollutant distributions, and for detecting and monitoring trace atmospheric species

  17. Chemical structure and dynamics: Annual report 1996

    Energy Technology Data Exchange (ETDEWEB)

    Colson, S.D.; McDowell, R.S.

    1997-03-01

    The Chemical Structure and Dynamics (CS&D) program is a major component of the William R. Wiley Environmental Molecular Sciences Laboratory (EMSL) developed by Pacific Northwest National Laboratory (PNNL) to provide a state-of-the-art collaborative facility for studies of chemical structure and dynamics. We respond to the need for a fundamental, molecular-level understanding of chemistry at a wide variety of environmentally important interfaces by (1) extending the experimental characterization and theoretical description of chemical reactions to encompass the effects of condensed media and interfaces; (2) developing a multidisciplinary capability for describing interfacial chemical processes within which the new knowledge generated can be brought to bear on complex phenomena in environmental chemistry and in nuclear waste processing and storage; and (3) developing state-of-the-art analytical methods for characterizing waste tanks and pollutant distributions, and for detecting and monitoring trace atmospheric species.

  18. Annual Report 2000. Chemical Structure and Dynamics

    Energy Technology Data Exchange (ETDEWEB)

    Colson, Steven D.; McDowell, Robin S.

    2001-04-15

    This annual report describes the research and accomplishments of the Chemical Structure and Dynamics Program in the year 2000, one of six research programs at the William R. Wiley Environmental Molecular Sciences Laboratory (EMSL) - a multidisciplinary, national scientific user facility and research organization. The Chemical Structure and Dynamics (CS&D) program is meeting the need for a fundamental, molecular-level understanding by 1) extending the experimental characterization and theoretical description of chemical reactions to encompass the effects of condensed media and interfaces; 2) developing a multidisciplinary capability for describing interfacial chemical processes relevant to environmental chemistry; and 3) developing state-of-the-art research and analytical methods for characterizing complex materials of the types found in natural and contaminated systems.

  19. Chemical structure and dynamics. Annual report 1995

    Energy Technology Data Exchange (ETDEWEB)

    Colson, S.D.; McDowell, R.S.

    1996-05-01

    The Chemical Structure and Dynamics program is a major component of Pacific Northwest National Laboratory`s Environmental Molecular Sciences Laboratory (EMSL), providing a state-of-the-art collaborative facility for studies of chemical structure and dynamics. We respond to the need for a fundamental, molecular-level understanding of chemistry at a wide variety of environmentally important interfaces by (1) extending the experimental characterization and theoretical description of chemical reactions to encompass the effects of condensed media and interfaces; (2) developing a multidisciplinary capability for describing interfacial chemical processes within which the new knowledge generated can be brought to bear on complex phenomena in environmental chemistry and in nuclear waste processing and storage; and (3) developing state-of-the-art analytical methods for the characterization of waste tanks and pollutant distributions, and for detection and monitoring of trace atmospheric species.

  20. Feature Extraction for Structural Dynamics Model Validation

    Energy Technology Data Exchange (ETDEWEB)

    Farrar, Charles [Los Alamos National Laboratory; Nishio, Mayuko [Yokohama University; Hemez, Francois [Los Alamos National Laboratory; Stull, Chris [Los Alamos National Laboratory; Park, Gyuhae [Chonnam Univesity; Cornwell, Phil [Rose-Hulman Institute of Technology; Figueiredo, Eloi [Universidade Lusófona; Luscher, D. J. [Los Alamos National Laboratory; Worden, Keith [University of Sheffield

    2016-01-13

    As structural dynamics becomes increasingly non-modal, stochastic and nonlinear, finite element model-updating technology must adopt the broader notions of model validation and uncertainty quantification. For example, particular re-sampling procedures must be implemented to propagate uncertainty through a forward calculation, and non-modal features must be defined to analyze nonlinear data sets. The latter topic is the focus of this report, but first, some more general comments regarding the concept of model validation will be discussed.

  1. Structure and dynamics of disordered systems

    International Nuclear Information System (INIS)

    Price, D.L.

    1989-01-01

    Neutron scattering has proved to be a powerful tool in the study of glasses and liquids: structures are investigated by neutron diffraction, and dynamics by inelastic neutron scattering. Evidence of current interest in this field is provided by the new instruments for diffraction from amorphous systems being constructed at IPNS, ISIS and the R2-reactor at Studsvik, in addition to existing instruments such as the D4B diffractometer at ILL. 14 refs., 9 figs

  2. On R factors for dynamic structure crystallography

    DEFF Research Database (Denmark)

    Coppens, Philip; Kaminski, Radoslaw; Schmøkel, Mette Stokkebro

    2010-01-01

    In studies of dynamic changes in crystals in which induced metastable species may have lifetimes of microseconds or less, refinements are most sensitive if based on the changes induced in the measured intensities. Agreement factors appropriate for such refinements, based on the ratios of the inte...... of the intensities before and after the external perturbation is applied, are discussed and compared with R factors commonly applied in static structure crystallography....

  3. Structure and dynamics of GPCR signaling complexes.

    Science.gov (United States)

    Hilger, Daniel; Masureel, Matthieu; Kobilka, Brian K

    2018-01-01

    G-protein-coupled receptors (GPCRs) relay numerous extracellular signals by triggering intracellular signaling through coupling with G proteins and arrestins. Recent breakthroughs in the structural determination of GPCRs and GPCR-transducer complexes represent important steps toward deciphering GPCR signal transduction at a molecular level. A full understanding of the molecular basis of GPCR-mediated signaling requires elucidation of the dynamics of receptors and their transducer complexes as well as their energy landscapes and conformational transition rates. Here, we summarize current insights into the structural plasticity of GPCR-G-protein and GPCR-arrestin complexes that underlies the regulation of the receptor's intracellular signaling profile.

  4. Dynamic soil-structure interaction of monopod and polypod foundations

    DEFF Research Database (Denmark)

    Andersen, Lars Vabbersgaard

    2016-01-01

    The paper concerns the importance of through–soil coupling for structures having foundations with more footings. First, a model for dynamic analysis of polypod footings is established in the frequency domain, employing Green’s function for wave propagation in a layered half-space. To allow analysis...... within the time domain, frequency-independent lumped-parameter models are developed. The paper proposes a decision criterion for determination of which components must be included within a lumped-parameter model in order to account for the structure–soil–structure interaction in an adequate and efficient...... manner. As a computational example, the dynamic response of a plane frame structure with two footings is compared for two cases: one with and one without the cross coupling. Homogeneous as well as layered soil is considered....

  5. Full scale dynamic testing of Paks nuclear power plant structures

    International Nuclear Information System (INIS)

    Da Rin, E.M.

    1995-01-01

    This report refers to the full-scale dynamic structural testing activities that have been performed in December 1994 at the Paks (H) Nuclear Power Plant, within the framework of: the IAEA Coordinated research Programme 'Benchmark Study for the Seismic Analysis and Testing of WWER-type Nuclear Power Plants, and the nuclear research activities of ENEL-WR/YDN, the Italian National Electricity Board in Rome. The specific objective of the conducted investigation was to obtain valid data on the dynamic behaviour of the plant's major constructions, under normal operating conditions, for enabling an assessment of their actual seismic safety to be made. As described in more detail hereafter, the Paks NPP site has been subjected to low level earthquake like ground shaking, through appropriately devised underground explosions, and the dynamic response of the plant's 1 st reactor unit important structures was appropriately measured and digitally recorded. In-situ free field response was measured concurrently and, moreover, site-specific geophysical and seismological data were simultaneously acquired too. The above-said experimental data is to provide basic information on the geophysical and seismological characteristics of the Paks NPP site, together with useful reference information on the true dynamic characteristics of its main structures and give some indications on the actual dynamic soil-structure interaction effects for the case of low level excitation

  6. Structured Analysis - IDEF0

    DEFF Research Database (Denmark)

    Larsen, Michael Holm

    1999-01-01

    This note introduces the IDEF0 modelling language (semantics and syntax), and associated rules and techniques, for developing structured graphical representations of a system or enterprise. Use of this standard for IDEF0 permits the construction of models comprising system functions (activities...... that require a modelling technique for the analysis, development, re-engineering, integration, or acquisition of information systems; and incorporate a systems or enterprise modelling technique into a business process analysis or software engineering methodology.This note is a summary of the Standard...... for Integration Definition for Function Modelling (IDEF0). I.e. the Draft Federal Information Processing Standards Publication 183, 1993, December 21, Announcing the Standard for Integration Definition for Function Modelling (IDEF0)....

  7. DYNAMIC CINEMATIC TO A STRUCTURE 2R

    Directory of Open Access Journals (Sweden)

    Florian Ion Tiberiu Petrescu

    2016-06-01

    Full Text Available Normal 0 false false false EN-US X-NONE X-NONE MicrosoftInternetExplorer4 Flat structures 2R can solve all the problems posed by all the robotic anthropomorphic structures. The study of the anthropomorphic robots by the use of a flat structure 2R is a much easier method than classical used spatial methods. The paper outlines a method for the determination of dynamic to a robotic structure 2R balanced. 2R plane structures are used in practice only in the form balanced, for which in this paper will be made, initial, the total balance, and then the study cinematico-dynamic will only develop on the model already balanced. Dynamic relations presented then briefly without deduction will be explained and discussed with regard to their application. On the basis of the model presented and following calculations performed can be chosen correctly the two electric motors in the actuator. /* Style Definitions */ table.MsoNormalTable {mso-style-name:"Table Normal"; mso-tstyle-rowband-size:0; mso-tstyle-colband-size:0; mso-style-noshow:yes; mso-style-priority:99; mso-style-qformat:yes; mso-style-parent:""; mso-padding-alt:0cm 5.4pt 0cm 5.4pt; mso-para-margin:0cm; mso-para-margin-bottom:.0001pt; mso-pagination:widow-orphan; font-size:11.0pt; font-family:"Calibri","sans-serif"; mso-ascii-font-family:Calibri; mso-ascii-theme-font:minor-latin; mso-fareast-font-family:"Times New Roman"; mso-fareast-theme-font:minor-fareast; mso-hansi-font-family:Calibri; mso-hansi-theme-font:minor-latin; mso-bidi-font-family:"Times New Roman"; mso-bidi-theme-font:minor-bidi;}

  8. Dynamic analysis and simulation at Chalk River

    International Nuclear Information System (INIS)

    Green, R.E.

    1976-01-01

    The paper outlines the role of dynamic analysis/simulation within AECL, discusses briefly some recent dynamic analysis/simulation studies in the Reactor Control Branch at CRNL, describes the dynamic simulation facilities being used by the Branch, and discusses the operation of the Dynamic Analysis Centre and how it might be used by analysts from outside the Reactor Control Branch and indeed, outside AECL. (author)

  9. Formula for Forced Vibration Analysis of Structures Using Static ...

    African Journals Online (AJOL)

    This Paper proposed and examined a formula for forced vibration analysis of structures using static factored response as equivalent dynamic response. Some methods of dynamic analysis are based on using static factored response as equivalent dynamic response thereby excluding the formulation of the equations of ...

  10. Synthesis, crystal structure analysis, spectral investigations, DFT computations and molecular dynamics and docking study of 4-benzyl-5-oxomorpholine-3-carbamide, a potential bioactive agent

    Science.gov (United States)

    Murthy, P. Krishna; Sheena Mary, Y.; Shyma Mary, Y.; Panicker, C. Yohannan; Suneetha, V.; Armaković, Stevan; Armaković, Sanja J.; Van Alsenoy, C.; Suchetan, P. A.

    2017-04-01

    4-benzyl-5-oxomorpholine-3-carbamide has been synthesized; single crystals were grown by slow evaporation solution growth technique at room temperature and characterized by single crystal X-ray diffraction, FT-IR, FT-Raman and 1H-NMR. The compound crystallizes in the monoclinic space group P21/n. The molecular geometry of the compound was optimized by using Density Functional Theory (DFT/B3LYP) method with 6-311++G(d,p) basis set in the ground state and geometric parameters are in agreement with the X-ray analysis results of the structure. The experimental vibrational spectra were compared with the calculated spectra and each vibrational wave number was assigned on the basis of potential energy distribution (PED). The electronic and charge transfer properties have been explained on the basis of highest occupied molecular orbital's (HOMOs) and lowest unoccupied molecular orbital's (LUMOs). Besides molecular electrostatic potential (MEP), frontier molecular orbital's (FMOs), some global reactivity descriptors, thermodynamic properties, non-linear optical (NLO) behavior and Mullikan charge analysis of the title compound were computed with the same method in gas phase, theoretically. Potential reactive sites of the title compound have been identified by average local ionization energy and Fukui functions, both mapped to the electron density surface. Bond dissociation energies for all single acyclic bonds have been calculated in order to investigate autoxidation and degradation properties of the title compound. Atoms with pronounced interactions with water molecules have been detected by calculations of radial distribution functions after molecular dynamics simulations. The experimental results are compared with the theoretical calculations using DFT methods for the fortification of the paper. Further the docking studies revealed that the title compound as a docked ligand forms a stable complex with pyrrole inhibitor with a binding affinity value of -7.5 kcal/mol. This

  11. Quasi-Steady-State Analysis based on Structural Modules and Timed Petri Net Predict System’s Dynamics: The Life Cycle of the Insulin Receptor

    Directory of Open Access Journals (Sweden)

    Jennifer Scheidel

    2015-12-01

    Full Text Available The insulin-dependent activation and recycling of the insulin receptor play an essential role in the regulation of the energy metabolism, leading to a special interest for pharmaceutical applications. Thus, the recycling of the insulin receptor has been intensively investigated, experimentally as well as theoretically. We developed a time-resolved, discrete model to describe stochastic dynamics and study the approximation of non-linear dynamics in the context of timed Petri nets. Additionally, using a graph-theoretical approach, we analyzed the structure of the regulatory system and demonstrated the close interrelation of structural network properties with the kinetic behavior. The transition invariants decomposed the model into overlapping subnetworks of various sizes, which represent basic functional modules. Moreover, we computed the quasi-steady states of these subnetworks and demonstrated that they are fundamental to understand the dynamic behavior of the system. The Petri net approach confirms the experimental results of insulin-stimulated degradation of the insulin receptor, which represents a common feature of insulin-resistant, hyperinsulinaemic states.

  12. Dynamic Failure of Composite and Sandwich Structures

    CERN Document Server

    Abrate, Serge; Rajapakse, Yapa D S

    2013-01-01

    This book presents a broad view of the current state of the art regarding the dynamic response of composite and sandwich structures subjected to impacts and explosions. Each chapter combines a thorough assessment of the literature with original contributions made by the authors.  The first section deals with fluid-structure interactions in marine structures.  The first chapter focuses on hull slamming and particularly cases in which the deformation of the structure affects the motion of the fluid during the water entry of flexible hulls. Chapter 2 presents an extensive series of tests underwater and in the air to determine the effects of explosions on composite and sandwich structures.  Full-scale structures were subjected to significant explosive charges, and such results are extremely rare in the open literature.  Chapter 3 describes a simple geometrical theory of diffraction for describing the interaction of an underwater blast wave with submerged structures. The second section addresses the problem of...

  13. Symplectic structures and dynamical symmetry groups

    International Nuclear Information System (INIS)

    Torres del Castillo, G.F.; Velazquez Q, M.P.

    2004-01-01

    Apart from the total energy, the two-dimensional isotropic harmonic oscillator possesses three independent constants of motion which, with the standard symplectic structure, generates a dynamical symmetry group isomorphic to SU (2). We show that, by suitably redefining the symplectic structure, any of these three constants of motion can be used as a Hamiltonian, and that the remaining two, together with the total energy, generate a dynamical symmetry group isomorphic to SU (1,1). We also show that the standard energy levels of the quantum two-dimensional isotropic harmonic oscillator and their degeneracies are obtained making use of the appropriate representations of SU(1,1), provided that the canonical commutation relations are modified according to the new symplectic structure. Whereas in classical mechanics the different symplectic structures lead to equivalent formulations of the equations of motion, in quantum mechanics the modifications of the commutation relations should be accompanied by modifications in the interpretation of the formalism in order to obtain results equivalent to those found with the common relations. (Author) 12 refs

  14. Static and dynamic buckling of thin-walled plate structures

    CERN Document Server

    Kubiak, Tomasz

    2013-01-01

    This monograph deals with buckling and postbuckling behavior of thin plates and thin-walled structures with flat wall subjected to static and dynamic load. The investigations are carried out in elastic range. The basic assumption here is the  thin plate theory. This method is used to determination the buckling load and postbuckling analysis of thin-walled structures subjected to static and dynamic load. The book introduces two methods for static and dynamic buckling investigation which allow for a wider understanding of the phenomenon. Two different methods also can allow uncoupling of the phenomena occurring at the same time and attempt to estimate their impact on the final result. A general mathematical model, adopted in proposed analytical-numerical method, enables the consideration of all types of stability loss i.e.local, global and interactive forms of buckling. The applied numerical-numerical method includes adjacent of walls, shear-lag phenomenon and a deplanation of cross-sections.

  15. Dynamic soil-structure interaction of monopod and polypod foundations

    DEFF Research Database (Denmark)

    Andersen, Lars Vabbersgaard

    2016-01-01

    The paper concerns the importance of through–soil coupling for structures having foundations with more footings. First, a model for dynamic analysis of polypod footings is established in the frequency domain, employing Green’s function for wave propagation in a layered half-space. To allow analysis...... within the time domain, frequency-independent lumped-parameter models are developed. The paper proposes a decision criterion for determination of which components must be included within a lumped-parameter model in order to account for the structure–soil–structure interaction in an adequate and efficient...

  16. Structural and dynamical alignment of enzymes with partial structural similarity

    International Nuclear Information System (INIS)

    Carnevale, Vincenzo; Pontiggia, Francesco; Micheletti, Cristian

    2007-01-01

    Proteins and enzymes, in order to carry our their biological tasks, often need to sustain concerted displacements of a large number of amino acids. In recent years many theoretical and computational studies have pointed out how these large-scale movements, also termed slow modes or essential dynamical spaces, are mostly dictated by the overall structural organization of the protein. Several fundamental questions arise when this fact is complemented by the observation that enzymes within the same enzymatic superfamily can have remarkable conformational differences. Could their large-scale movements be similar despite the difference in structure? In this study we address this issue and present a quantitative scheme for comparing the slow modes in proteins that, though differing in sequence, length and tertiary structure, still admit a partial structural superposition. We illustrate the application of the method to two representatives of the protease enzymatic superfamily, carboxypeptidase A and pyroglutamyl peptidase

  17. The structural dynamics of social class.

    Science.gov (United States)

    Kraus, Michael W; Park, Jun Won

    2017-12-01

    Individual agency accounts of social class persist in society and even in psychological science despite clear evidence for the role of social structures. This article argues that social class is defined by the structural dynamics of society. Specifically, access to powerful networks, groups, and institutions, and inequalities in wealth and other economic resources shape proximal social environments that influence how individuals express their internal states and motivations. An account of social class that highlights the means by which structures shape and are shaped by individuals guides our understanding of how people move up or down in the social class hierarchy, and provides a framework for interpreting neuroscience studies, experimental paradigms, and approaches that attempt to intervene on social class disparities. Copyright © 2017 Elsevier Ltd. All rights reserved.

  18. Dynamic sign structures in visual art and music

    DEFF Research Database (Denmark)

    Zeller, Jörg

    2006-01-01

    Seemingly static meaning carriers in visual art are considered as aspects of holistic dynamical sign structures.......Seemingly static meaning carriers in visual art are considered as aspects of holistic dynamical sign structures....

  19. Simplified Dynamic Analysis of Grinders Spindle Node

    Science.gov (United States)

    Demec, Peter

    2014-12-01

    The contribution deals with the simplified dynamic analysis of surface grinding machine spindle node. Dynamic analysis is based on the use of the transfer matrix method, which is essentially a matrix form of method of initial parameters. The advantage of the described method, despite the seemingly complex mathematical apparatus, is primarily, that it does not require for solve the problem of costly commercial software using finite element method. All calculations can be made for example in MS Excel, which is advantageous especially in the initial stages of constructing of spindle node for the rapid assessment of the suitability its design. After detailing the entire structure of spindle node is then also necessary to perform the refined dynamic analysis in the environment of FEM, which it requires the necessary skills and experience and it is therefore economically difficult. This work was developed within grant project KEGA No. 023TUKE-4/2012 Creation of a comprehensive educational - teaching material for the article Production technique using a combination of traditional and modern information technology and e-learning.

  20. Dynamics of a structured neuron population

    International Nuclear Information System (INIS)

    Pakdaman, Khashayar; Salort, Delphine; Perthame, Benoît

    2010-01-01

    We study the dynamics of assemblies of interacting neurons. For large fully connected networks, the dynamics of the system can be described by a partial differential equation reminiscent of age-structure models used in mathematical ecology, where the 'age' of a neuron represents the time elapsed since its last discharge. The nonlinearity arises from the connectivity J of the network. We prove some mathematical properties of the model that are directly related to qualitative properties. On the one hand, we prove that it is well-posed and that it admits stationary states which, depending upon the connectivity, can be unique or not. On the other hand, we study the long time behaviour of solutions; both for small and large J, we prove the relaxation to the steady state describing asynchronous firing of the neurons. In the middle range, numerical experiments show that periodic solutions appear expressing re-synchronization of the network and asynchronous firing

  1. Stochastic collocation-based finite element of structural nonlinear dynamics with application in composite structures

    Directory of Open Access Journals (Sweden)

    Sepahvand K.

    2016-01-01

    Full Text Available Stochastic analysis of structures having nonlinearity by means of sampling methods leads to expensive cost in term of computational time. In contrast, non-sampling methods based on the spectral representation of uncertainty are very efficient with comparable accurate results. In this pa- per, the application of spectral methods to nonlinear dynamics of structures with random parameters is investigated. The impact of the parameter randomness on structural responses has been consid- ered. To this end, uncertain parameters and the structure responses are represented using the gPC expansions with unknown deterministic coefficients and random orthogonal polynomial basis. The deterministic finite element model of the structure is used as black-box and it is executed on a set of random collocation points. As the sample structure responses are estimated, a nonlinear optimization process is employed to calculate the unknown coefficients. The method has this main advantage that can be used for complicated nonlinear structural dynamic problems for which the deterministic FEM model has been already developed. Furthermore, it is very time efficient in comparison with sampling methods, as MC simulations. The application of the method is applied to the nonlinear transient analysis of composite beam structures including uncertain quadratic random damping. The results show that the proposed method can capture the large range of uncertainty in input parameters as well as in structural dynamic responses while it is too time-efficient.

  2. PANET: a GPU-based tool for fast parallel analysis of robustness dynamics and feed-forward/feedback loop structures in large-scale biological networks.

    Directory of Open Access Journals (Sweden)

    Hung-Cuong Trinh

    Full Text Available It has been a challenge in systems biology to unravel relationships between structural properties and dynamic behaviors of biological networks. A Cytoscape plugin named NetDS was recently proposed to analyze the robustness-related dynamics and feed-forward/feedback loop structures of biological networks. Despite such a useful function, limitations on the network size that can be analyzed exist due to high computational costs. In addition, the plugin cannot verify an intrinsic property which can be induced by an observed result because it has no function to simulate the observation on a large number of random networks. To overcome these limitations, we have developed a novel software tool, PANET. First, the time-consuming parts of NetDS were redesigned to be processed in parallel using the OpenCL library. This approach utilizes the full computing power of multi-core central processing units and graphics processing units. Eventually, this made it possible to investigate a large-scale network such as a human signaling network with 1,609 nodes and 5,063 links. We also developed a new function to perform a batch-mode simulation where it generates a lot of random networks and conducts robustness calculations and feed-forward/feedback loop examinations of them. This helps us to determine if the findings in real biological networks are valid in arbitrary random networks or not. We tested our plugin in two case studies based on two large-scale signaling networks and found interesting results regarding relationships between coherently coupled feed-forward/feedback loops and robustness. In addition, we verified whether or not those findings are consistently conserved in random networks through batch-mode simulations. Taken together, our plugin is expected to effectively investigate various relationships between dynamics and structural properties in large-scale networks. Our software tool, user manual and example datasets are freely available at http://panet-csc.sourceforge.net/.

  3. Fundamental structures of dynamic social networks.

    Science.gov (United States)

    Sekara, Vedran; Stopczynski, Arkadiusz; Lehmann, Sune

    2016-09-06

    Social systems are in a constant state of flux, with dynamics spanning from minute-by-minute changes to patterns present on the timescale of years. Accurate models of social dynamics are important for understanding the spreading of influence or diseases, formation of friendships, and the productivity of teams. Although there has been much progress on understanding complex networks over the past decade, little is known about the regularities governing the microdynamics of social networks. Here, we explore the dynamic social network of a densely-connected population of ∼1,000 individuals and their interactions in the network of real-world person-to-person proximity measured via Bluetooth, as well as their telecommunication networks, online social media contacts, geolocation, and demographic data. These high-resolution data allow us to observe social groups directly, rendering community detection unnecessary. Starting from 5-min time slices, we uncover dynamic social structures expressed on multiple timescales. On the hourly timescale, we find that gatherings are fluid, with members coming and going, but organized via a stable core of individuals. Each core represents a social context. Cores exhibit a pattern of recurring meetings across weeks and months, each with varying degrees of regularity. Taken together, these findings provide a powerful simplification of the social network, where cores represent fundamental structures expressed with strong temporal and spatial regularity. Using this framework, we explore the complex interplay between social and geospatial behavior, documenting how the formation of cores is preceded by coordination behavior in the communication networks and demonstrating that social behavior can be predicted with high precision.

  4. Experimental analysis of the dynamic structural behaviour of the Hospital of Pievepelago (Modena); Analisi sperimentale del comportamento dinamico del poliambulatorio di Pievepelago a seguito dell`intervento di miglioramento antisismico

    Energy Technology Data Exchange (ETDEWEB)

    Buffarini, Giacomo; Clemente, Paolo; Rinaldis, Dario [ENEA, Centro Ricerche Casaccia, Rome (Italy). Dipt. Ambiente

    1997-07-01

    The research work leading to this report is the result of a joint effort between the National Agency for New Technologies and the Environments and the Emilia Romagna regional council, that involved the Environmental Department of the National Agency for New Technologies and the Environments in the experimental analysis of the dynamic structural behaviour of the Hospital of Pievepelago (Modena). A strengthening design has been performed on behalf of the Pievepelago town council, and the Emilia Romagna regional council asked the National Agency for New Technologies and the Environments to study the effectiveness of the intervention by carrying out the analysis of the dynamic behaviour of the structure both before and after the works. The results of the first phase are shown in a previous report. This report is relative to the experimental study on the strengthened building.

  5. Analysis of sea ice dynamics

    Science.gov (United States)

    Zwally, J.

    1988-01-01

    The ongoing work has established the basis for using multiyear sea ice concentrations from SMMR passive microwave for studies of largescale advection and convergence/divergence of the Arctic sea ice pack. Comparisons were made with numerical model simulations and buoy data showing qualitative agreement on daily to interannual time scales. Analysis of the 7-year SMMR data set shows significant interannual variations in the total area of multiyear ice. The scientific objective is to investigate the dynamics, mass balance, and interannual variability of the Arctic sea ice pack. The research emphasizes the direct application of sea ice parameters derived from passive microwave data (SMMR and SSMI) and collaborative studies using a sea ice dynamics model. The possible causes of observed interannual variations in the multiyear ice area are being examined. The relative effects of variations in the large scale advection and convergence/divergence within the ice pack on a regional and seasonal basis are investigated. The effects of anomolous atmospheric forcings are being examined, including the long-lived effects of synoptic events and monthly variations in the mean geostrophic winds. Estimates to be made will include the amount of new ice production within the ice pack during winter and the amount of ice exported from the pack.

  6. Dynamic speckle analysis using multivariate techniques

    International Nuclear Information System (INIS)

    López-Alonso, José M; Alda, Javier; Rabal, Héctor; Grumel, Eduardo; Trivi, Marcelo

    2015-01-01

    In this work we use principal components analysis to characterize dynamic speckle patterns. This analysis quantitatively identifies different dynamics that could be associated to physical phenomena occurring in the sample. We also found the contribution explained by each principal component, or by a group of them. The method analyzes the paint drying process over a hidden topography. It can be used for fast screening and identification of different dynamics in biological or industrial samples by means of dynamic speckle interferometry. (paper)

  7. Energy-based dynamic reliability analysis

    International Nuclear Information System (INIS)

    Fukushima, S.; Mizutani, M.; Akao, Y.; Katukura, H.

    1993-01-01

    Dynamic reliability analysis (DRA) of structures subjected to strong ground motions is one of the most important parts of the safety assessment of structures. So far many DRA methods based on probabilistic theory have been developed. Generally, DRA methods are divided into three phases; seismic hazard analysis, fragility synthesis, and evaluation of probability of failure. In most DRA method, the seismic hazard curves of peak ground acceleration (PGA) or spectral acceleration at a certain period is evaluated to show the occurrence ratio of input motion in the seismic hazard analysis, and, in the fragility synthesis, random vibration theory is adopted to calculate the conditional probability of failure of structures given the occurrence of input motion. Since random vibration theory is developed in the frequency domain, PGAs are transformed into information in the frequency domain by means of introducing so-called peak factors and power spectra. This fact suggests that it is more convenient for DRA researchers to define the seismic hazardous the indices defined in the frequency domain from the first. In this paper, DRAs based on the two indices, i.e. PGA and total energy, are investigated in detail. Through the study, features and issues of DRA based on the total energy (hereafter called EDRA) are clarified from the viewpoint of the responses of the structure. (author)

  8. Heat capacity effects associated with the hydrophobic hydration and interaction of simple solutes: a detailed structural and energetical analysis based on molecular dynamics simulations.

    Science.gov (United States)

    Paschek, Dietmar

    2004-06-08

    We examine the SPCE [H. J. C. Berendsen et al., J. Chem. Phys. 91, 6269 (1987)] and TIP5P [M. W. Mahoney and W. L. Jorgensen, J. Chem. Phys 112, 8910 (2000)] water models using a temperature series of molecular-dynamics simulations in order to study heat-capacity effects associated with the hydrophobic hydration and interaction of xenon particles. The temperature interval between 275 and 375 K along the 0.1-MPa isobar is studied. For all investigated models and state points we calculate the excess chemical potential for xenon employing the Widom particle insertion technique. The solvation enthalpy and excess heat capacity is obtained from the temperature dependence of the chemical potentials and, alternatively, directly by Ewald summation, as well as a reaction field based method. All three methods provide consistent results. In addition, the reaction field technique allows a separation of the solvation enthalpy into solute/solvent and solvent/solvent parts. We find that the solvent/solvent contribution to the excess heat capacity is dominating, being about one order of magnitude larger than the solute/solvent part. This observation is attributed to the enlarged heat capacity of the water molecules in the hydration shell. A detailed spatial analysis of the heat capacity of the water molecules around a pair of xenon particles at different separations reveals that even more enhanced heat capacity of the water located in the bisector plane between two adjacent xenon atoms is responsible for the maximum of the heat capacity found for the desolvation barrier distance, recently reported by Shimizu and Chan [J. Am. Chem. Soc. 123, 2083 (2001)]. The about 60% enlarged heat capacity of water in the concave part of the joint xenon-xenon hydration shell is the result of a counterplay of strengthened hydrogen bonds and an enhanced breaking of hydrogen bonds with increasing temperature. Differences between the two models with respect to the heat capacity in the xenon

  9. Spectroscopic Tools for Quantitative Studies of DNA Structure and Dynamics

    DEFF Research Database (Denmark)

    Preus, Søren

    The main objective of this thesis is to develop quantitative fluorescence-based, spectroscopic tools for probing the 3D structure and dynamics of DNA and RNA. The thesis is founded on six peer-reviewed papers covering mainly the development, characterization and use of fluorescent nucleobase...... analogues. In addition, four software packages is presented for the simulation and quantitative analysis of time-resolved and steady-state UV-Vis absorption and fluorescence experiments....

  10. Leveraging natural dynamical structures to explore multi-body systems

    Science.gov (United States)

    Bosanac, Natasha

    Multi-body systems have become the target of an increasing number of mission concepts and observations, supplying further information about the composition, origin and dynamical environment of bodies within the solar system and beyond. In many of these scenarios, identification and characterization of the particular solutions that exist in a circular restricted three-body model is valuable. This insight into the underlying natural dynamical structures is achieved via the application of dynamical systems techniques. One application of such analysis is trajectory design for CubeSats, which are intended to explore cislunar space and other planetary systems. These increasingly complex mission objectives necessitate innovative trajectory design strategies for spacecraft within our solar system, as well as the capability for rapid and well-informed redesign. Accordingly, a trajectory design framework is constructed using dynamical systems techniques and demonstrated for the Lunar IceCube mission. An additional application explored in this investigation involves the motion of an exoplanet near a binary star system. Due to the strong gravitational field near a binary star, physicists have previously leveraged these systems as testbeds for examining the validity of gravitational and relativistic theories. In this investigation, a preliminary analysis into the effect of an additional three-body interaction on the dynamical environment near a large mass ratio binary system is conducted. As demonstrated through both of these sample applications, identification and characterization of the natural particular solutions that exist within a multi-body system supports a well-informed and guided analysis.

  11. Application of dynamic relaxation and finite elements methods for the structural analysis of a scale model of a prestressed concrete pressure vessel

    International Nuclear Information System (INIS)

    Tamura, Masaru

    1979-01-01

    A stress and strain analysis was made of a scale model of a Prestressed Concrete Pressure Vessel for a Boiling Water Reactor. The aim of this work was to obtain an experimental verification of the calculation method actually used at IPEN. The 1/10 scale model was built and tested at the Instituto Sperimentale Modelli e Structture, ISMES, Italy. The dynamic relaxation program PV2-A and the finite element programs , FEAST-1 have been used. A comparative analysis of the final results was made. A preliminary analysis was made for a simplified monocavity model now under development at IPEN with the object of confirming the data and the calculation method used. (author)

  12. Turing Instability-Driven Biofabrication of Branching Tissue Structures: A Dynamic Simulation and Analysis Based on the Reaction–Diffusion Mechanism †

    Directory of Open Access Journals (Sweden)

    Xiaolu Zhu

    2018-03-01

    Full Text Available Four-dimensional (4D biofabrication techniques aim to dynamically produce and control three-dimensional (3D biological structures that would transform their shapes or functionalities with time, when a stimulus is imposed or cell post-printing self-assembly occurs. The evolution of 3D branching patterns via self-assembly of cells is critical for the 4D biofabrication of artificial organs or tissues with branched geometry. However, it is still unclear how the formation and evolution of these branching patterns are biologically encoded. Here, we study the biofabrication of lung branching structures utilizing a simulation model based on Turing instability that raises a dynamic reaction–diffusion (RD process of the biomolecules and cells. The simulation model incorporates partial differential equations of four variables, describing the tempo-spatial distribution of the variables in 3D over time. The simulation results present the formation and evolution process of 3D branching patterns over time and also interpret both the behaviors of side-branching and tip-splitting as the stalk grows and the fabrication style under an external concentration gradient of morphogen, through 3D visualization. This provides a theoretical framework for rationally guiding the 4D biofabrication of lung airway grafts via cellular self-organization, which would potentially reduce the complexity of future experimental research and number of trials.

  13. Structural Dynamics, Stability, and Control of Helicopters

    Science.gov (United States)

    Meirovitch, L.; Hale, A. L.

    1978-01-01

    The dynamic synthesis of gyroscopic structures consisting of point-connected substructures is investigated. The objective is to develop a mathematical model capable of an adequate simulation of the modal characteristics of a helicopter using a minimum number of degrees of freedom. The basic approach is to regard the helicopter structure as an assemblage of flexible substructures. The variational equations for the perturbed motion about certain equilibrium solutions are derived. The discretized variational equations can be conveniently exhibited in matrix form, and a great deal of information about the system modal characteristics can be extracted from the coefficient matrices. The derivation of the variational equations requires a monumental amount of algebraic operations. To automate this task a symbolic manipulation program on a digital computer is developed.

  14. Structure and dynamics of molten salts

    International Nuclear Information System (INIS)

    Rovere, M.; Tosi, M.P.

    1986-02-01

    Modern techniques of liquid state physics have been successfully used over the last decade to probe the microscopic structure and dynamics of a variety of multicomponent liquids in which relative ordering of the species is present near freezing. The alkali halides are prototypes for this specific type of short range order in relation to the nature of bonding, but the systems in question include also other monovalent and polyvalent metal-ion halides, alkali-based intermetallic compounds, and chalcogen-based alloys. A viewpoint is taken in this review which gives attention to relations between liquid and solid phase properties across melting for compound systems at stoichiometric composition. In addition, large deviations from stoichiometry can be realized in the liquid phase, to display trends of evolution of structure, bonding and electronic states with composition. (author)

  15. Synthesis, XRD single crystal structure analysis, vibrational spectral analysis, molecular dynamics and molecular docking studies of 2-(3-methoxy-4-hydroxyphenyl) benzothiazole

    Science.gov (United States)

    Sarau Devi, A.; Aswathy, V. V.; Sheena Mary, Y.; Yohannan Panicker, C.; Armaković, Stevan; Armaković, Sanja J.; Ravindran, Reena; Van Alsenoy, C.

    2017-11-01

    The vibrational spectra and corresponding vibrational assignments of 2-(3-methoxy-4-hydroxyphenyl)benzothiazole is reported. Single crystal XRD data of the title compound is reported and the orientation of methoxy group is cis to nitrogen atom of the thiazole ring. The phenyl ring breathing modes of the title compound are assigned at 1042 and 731 cm-1 theoretically. The charge transfer within the molecule is studied using frontier molecular orbital analysis. The chemical reactivity descriptors are calculated theoretically. The NMR spectral data predicted theoretically are in good agreement with the experimental data. The strong negative region spread over the phenyl rings, nitrogen atom and oxygen atom of the hydroxyl group in the MEP plot is due to the immense conjugative and hyper conjugative resonance charge delocalization of π-electrons. Molecule sites prone to electrophilic attacks have been determined by analysis of ALIE surfaces, while Fukui functions provided further insight into the local reactivity properties of title molecule. Autoxidation properties have been investigated by calculation of bond dissociation energies (BDEs) of hydrogen abstraction, while BDEs of the rest of the single acyclic bonds were valuable for the further investigation of degradation properties. Calculation of radial distribution functions was performed in order to determine which atoms of the title molecule have pronounced interactions with water molecules. The title compound forms a stable complex with aryl hydrocarbon receptor and can be a lead compound for developing new anti-tumor drug. Antimicrobial properties of the title compound was screened against one bacterial culture Escherchia coli and four fungal cultures viz., Aspergillus niger, Pencillum chrysogenum, Saccharomyces cerevisiae and Rhyzopus stolonifer.

  16. Mutational Analysis on Membrane Associated Transporter Protein (MATP) and Their Structural Consequences in Oculocutaeous Albinism Type 4 (OCA4)-A Molecular Dynamics Approach.

    Science.gov (United States)

    Kamaraj, Balu; Purohit, Rituraj

    2016-11-01

    Oculocutaneous albinism type IV (OCA4) is an autosomal recessive inherited disorder which is characterized by reduced biosynthesis of melanin pigmentation in skin, hair, and eyes and caused by the genetic mutations in the membrane-associated transporter protein (MATP) encoded by SLC45A2 gene. The MATP protein consists of 530 amino acids which contains 12 putative transmembrane domains and plays an important role in pigmentation and probably functions as a membrane transporter in melanosomes. We scrutinized the most OCA4 disease-associated mutation and their structural consequences on SLC45A2 gene. To understand the atomic arrangement in 3D space, the native and mutant structures were modeled. Further the structural behavior of native and mutant MATP protein was investigated by molecular dynamics simulation (MDS) approach in explicit lipid and water background. We found Y317C as the most deleterious and disease-associated SNP on SLC45A2 gene. In MDS, mutations in MATP protein showed loss of stability and became more flexible, which alter its structural conformation and function. This phenomenon has indicated a significant role in inducing OCA4. Our study explored the understanding of molecular mechanism of MATP protein upon mutation at atomic level and further helps in the field of pharmacogenomics to develop a personalized medicine for OCA4 disorder. J. Cell. Biochem. 117: 2608-2619, 2016. © 2016 Wiley Periodicals, Inc. © 2016 Wiley Periodicals, Inc.

  17. Characterisation of the dynamic characteristics of a complex jointed structure

    Directory of Open Access Journals (Sweden)

    Sulaiman M. S. A.

    2017-01-01

    Full Text Available Every structure that assembled with the joints has a significant effect on the dynamic behaviour of the structure. Therefore, the overall dynamic behaviour of the jointed structure highly relies on these joints. Finite element method (FEM is commonly used to model an element connector for the jointed structure due to its because every jointed structure has its owns joint properties. The aims of this research are to identify the potential element connectors that are available in commercial finite element analysis package in order to represent the joints for spot welds and adhesive joints. The reliability of potential connector elements are quantified by comparing the predicted result calculated from commercial finite element analysis package with the experimental result that obtained from the LMS Scadas. The model of element connectors have been constructed based on three types of the case studies. The comparison reveals that the combination of Type 2 (ACM2 and Type 3 (CWELD have shown a better capability to represent the joints of the complex jointed structure.

  18. Solving graph problems with dynamic computation structures

    Science.gov (United States)

    Babb, Jonathan W.; Frank, Matthew; Agarwal, Anant

    1996-10-01

    We introduce dynamic computation structures (DCS), a compilation technique to produce dynamic code for reconfigurable computing. DCS specializes directed graph instances into user-level hardware for reconfigurable architectures. Several problems such as shortest path and transitive closure exhibit the general properties of closed semirings, an algebraic structure for solving directed paths. Motivating our application domain choice of closed semiring problems is the fact that logic emulation software already maps a special case of directed graphs, namely logic netlists, onto arrays of field programmable gate arrays (FPGA). A certain type of logic emulation software called virtual wires further allows an FPGA array to be viewed as a machine-independent computing fabric. Thus, a virtual wires compiler, coupled with front-end commercial behavioral logic synthesis software, enables automatic behavioral compilation into a multi-FPGA computing fabric. We have implemented a DCS front-end compiler to parallelize the entire inner loop of the classic Bellman-Ford algorithm into synthesizable behavioral verilog. Leveraging virtual wire compilation and behavioral synthesis, we have automatically generated designs of 14 to 261 FPGAs from a single graph instance. We achieve speedups proportional to the number of graph edges - - from 10X to almost 400X versus a 125 SPECint SparcStation 10.

  19. Chemical Structure and Dynamics annual report 1997

    International Nuclear Information System (INIS)

    Colson, S.D.; McDowell, R.S.

    1998-03-01

    The Chemical Structure and Dynamics (CS and D) program is a major component of the William R. Wiley Environmental Molecular Sciences Laboratory (EMSL), developed by Pacific Northwest National Laboratory (PNNL) to provide a state-of-the-art collaborative facility for studies of chemical structure and dynamics. The authors respond to the need for a fundamental, molecular level understanding of chemistry at a wide variety of environmentally important interfaces by: (1) extending the experimental characterization and theoretical description of chemical reactions to encompass the effects of condensed media and interfaces; (2) developing a multidisciplinary capability for describing interfacial chemical processes within which the new knowledge generated can be brought to bear on complex phenomena in environmental chemistry and in nuclear waste processing and storage; and (3) developing state-of-the-art analytical methods for characterizing complex materials of the types found in stored wastes and contaminated soils, and for detecting and monitoring trace atmospheric species. The focus of the research is defined primarily by DOE's environmental problems: fate and transport of contaminants in the subsurface environment, processing and storage of waste materials, cellular effects of chemical and radiological insult, and atmospheric chemistry as it relates to air quality and global change. Twenty-seven projects are described under the following topical sections: Reaction mechanisms at interfaces; High-energy processes at environmental interfaces; Cluster models of the condensed phase; and Miscellaneous

  20. Chemical Structure and Dynamics annual report 1997

    Energy Technology Data Exchange (ETDEWEB)

    Colson, S.D.; McDowell, R.S.

    1998-03-01

    The Chemical Structure and Dynamics (CS and D) program is a major component of the William R. Wiley Environmental Molecular Sciences Laboratory (EMSL), developed by Pacific Northwest National Laboratory (PNNL) to provide a state-of-the-art collaborative facility for studies of chemical structure and dynamics. The authors respond to the need for a fundamental, molecular level understanding of chemistry at a wide variety of environmentally important interfaces by: (1) extending the experimental characterization and theoretical description of chemical reactions to encompass the effects of condensed media and interfaces; (2) developing a multidisciplinary capability for describing interfacial chemical processes within which the new knowledge generated can be brought to bear on complex phenomena in environmental chemistry and in nuclear waste processing and storage; and (3) developing state-of-the-art analytical methods for characterizing complex materials of the types found in stored wastes and contaminated soils, and for detecting and monitoring trace atmospheric species. The focus of the research is defined primarily by DOE`s environmental problems: fate and transport of contaminants in the subsurface environment, processing and storage of waste materials, cellular effects of chemical and radiological insult, and atmospheric chemistry as it relates to air quality and global change. Twenty-seven projects are described under the following topical sections: Reaction mechanisms at interfaces; High-energy processes at environmental interfaces; Cluster models of the condensed phase; and Miscellaneous.

  1. Modeling Insurgent Network Structure and Dynamics

    Science.gov (United States)

    Gabbay, Michael; Thirkill-Mackelprang, Ashley

    2010-03-01

    We present a methodology for mapping insurgent network structure based on their public rhetoric. Indicators of cooperative links between insurgent groups at both the leadership and rank-and-file levels are used, such as joint policy statements or joint operations claims. In addition, a targeting policy measure is constructed on the basis of insurgent targeting claims. Network diagrams which integrate these measures of insurgent cooperation and ideology are generated for different periods of the Iraqi and Afghan insurgencies. The network diagrams exhibit meaningful changes which track the evolution of the strategic environment faced by insurgent groups. Correlations between targeting policy and network structure indicate that insurgent targeting claims are aimed at establishing a group identity among the spectrum of rank-and-file insurgency supporters. A dynamical systems model of insurgent alliance formation and factionalism is presented which evolves the relationship between insurgent group dyads as a function of their ideological differences and their current relationships. The ability of the model to qualitatively and quantitatively capture insurgent network dynamics observed in the data is discussed.

  2. The structure and dynamics of patterns of Benard convection cells

    International Nuclear Information System (INIS)

    Rivier, N.; Imperial Coll. of Science and Technology, London; Lausanne Univ.

    1990-08-01

    Benard-Marangoni convection, in containers with large aspect ratio, exhibits space-filling cellular structures, highly deformable, but crystallized. They contain dislocations and grain boundaries generated and moved by elementary topological transformations, and are subjected to a weak shear stress due to the earth's rotation. The cellular structure and its fluctuations are analyzed from a crystallographic viewpoint, by using two complementary approaches. One is a global analysis of cellular structures in cylindrical symmetry. Their structural stability and defect pattern are obtained as topological mode-locking of a continuous structural parameter. The other, a local, molecular dynamics of the cells, gives a realistic parametrization of the forces and the transformations by generalizing the Voronoi cell construction in one extra dimension. 23 refs., 8 figs

  3. A skeleton structure of self-replicating dynamics

    Science.gov (United States)

    Nishiura, Yasumasa; Ueyama, Daishin

    1999-06-01

    Self-replicating patterns (SRP) have been observed in several chemical reaction models, such as the Gray-Scott (GS) model, as well as in physical experiments. Watching these experiments (computational and physical) is like watching the more familiar coarsening processes but in reverse: the number of unit localized patterns increases until they fill the domain completely. Self-replicating dynamics, then, can be regarded as a transient process from a localized trigger to a stable stationery or oscillating Turing pattern. Since it is a transient process, it is very difficult to give a suitable definition to characterize SRP. It cannot be described in terms of well-studied structures such as the attractor or a singular saddle orbit for a dynamical system. In this paper, we present a new point of view to describe the transient dynamics of SRP over a finite interval of time. We focus our attention on the basic mechanism causing SRP from a global bifurcational point of view and take our clues from two model systems including the GS model. A careful analysis of the anatomy of the global bifurcation diagram suggests that the dynamics of SRP is related to a hierarchical structure of limit points of folding bifurcation branches in parameter regions where the branches have ceased to exist. Thus, the skeleton structure mentioned in the title refers to the remains of bifurcation branches, the aftereffects of which are manifest in the dynamics of SRP. One of the natural and important problems is about the existence of an organizing center from which the whole hierarchical structure of limit points emerges. In our setting, the numerics suggests a strong candidate for that, i.e., Bogdanov-Takens-Turing (BTT) singularity together with the presence of a stable critical point, and so this indicates a universality of the above structure in the class of equations sharing this characteristic.

  4. Dynamics and control of twisting bi-stable structures

    Science.gov (United States)

    Arrieta, Andres F.; van Gemmeren, Valentin; Anderson, Aaron J.; Weaver, Paul M.

    2018-02-01

    Compliance-based morphing structures have the potential to offer large shape adaptation, high stiffness and low weight, while reducing complexity, friction, and scalability problems of mechanism based systems. A promising class of structure that enables these characteristics are multi-stable structures given their ability to exhibit large deflections and rotations without the expensive need for continuous actuation, with the latter only required intermittently. Furthermore, multi-stable structures exhibit inherently fast response due to the snap-through instability governing changes between stable states, enabling rapid configuration switching between the discrete number of programmed shapes of the structure. In this paper, the design and utilisation of the inherent nonlinear dynamics of bi-stable twisting I-beam structures for actuation with low strain piezoelectric materials is presented. The I-beam structure consists of three compliant components assembled into a monolithic single element, free of moving parts, and showing large deflections between two stable states. Finite element analysis is utilised to uncover the distribution of strain across the width of the flange, guiding the choice of positioning for piezoelectric actuators. In addition, the actuation authority is maximised by calculating the generalised coupling coefficient for different positions of the piezoelectric actuators. The results obtained are employed to tailor and test I-beam designs exhibiting desired large deflection between stable states, while still enabling the activation of snap-through with the low strain piezoelectric actuators. To this end, the dynamic response of the I-beams to piezoelectric excitation is investigated, revealing that resonant excitations are insufficient to dynamically trigger snap-through. A novel bang-bang control strategy, which exploits the nonlinear dynamics of the structure successfully triggers both single and constant snap-through between the stable states

  5. Analysis of the structural and functional roles of coupling helices in the ATP-binding cassette transporter MsbA through enzyme assays and molecular dynamics simulations.

    Science.gov (United States)

    Furuta, Tadaomi; Yamaguchi, Tomohiro; Kato, Hiroaki; Sakurai, Minoru

    2014-07-08

    ATP-binding cassette (ABC) transporters are constructed from some common structural units: the highly conserved nucleotide-binding domains (NBDs), which work as a nucleotide-dependent engine for driving substrate transport, the diverse transmembrane domains (TMDs), which create the translocation pathway, and the coupling helices (CHs), which are located at the NBD-TMD interface. Although the CHs are believed to be essential for NBD-TMD communication, their roles remain unclear. In this study, we performed enzyme assays and molecular dynamics (MD) simulations of the ABC transporter MsbA and two MsbA mutants in which the amino acid residues of one of the CHs were mutated to alanines: (i) wild type (Wt), (ii) CH1 mutant (Mt1), and (iii) CH2 mutant (Mt2). The experiments show that the CH2 mutation decreases the ATPase activity (kcat) compared with that of the Wt (a decrease of 32%), and a nearly equal degree of decrease in the ATP binding affinity (Km) was observed for both Mt1 and Mt2. The MD simulations successfully accounted for several structural and dynamical origins for these experimental observations. In addition, on the basis of collective motion and morphing analyses, we propose that the reverse-rotational motions and noddinglike motions between the NBDs and TMDs are indispensable for the conformational transition between the inward- and outward-facing conformations. In particular, CH2 is significantly important for the occurrence of the noddinglike motion. These findings provide important insights into the structure-function relationship of ABC transporters.

  6. Dynamic rupture analysis of reinforced concrete shells

    International Nuclear Information System (INIS)

    Rebora, B.; Zimmermann, Th.; Wolf, J.P.

    1976-01-01

    Extreme dynamic loading conditions often require the rupture analysis of reinforced and prestressed-concrete structures. The study presented in this paper extends a method of analysis of dynamic loading conditions which has proven efficient for short-time loads. Another aim is to adapt the method to thin-walled structures. It is not sufficient to work only with plastic rupture and yield surfaces locally which are compared to the elastic distribution of the stress resultants; it is essential to account for the redistribution of the latter. The method proposed consists of discretizing the structure into isoparametric three-dimensional elements with 20 nodes for the concrete and one-dimensional bar elements with three nodes for the steel. The latter can also be handled with a 'smeared' two-dimensional membrane element. In compression a three-dimensional non-linear elastic constitutive law is introduced for the concrete, and a triaxial failure surface expressed in the stress invariants is used, determining cracking and crushing. Two- and three-dimensional cracking surfaces in which no components of stress are transmitted are accounted for. The possibility exists that, during the history of loading, cracks can close up again. For steel, a yield criterion is selected. The non-linear analysis is based on the concept of initial stress. Residual loads are calculated using information in Gauss integration points. The ultimate load is reached when the algorithm does not converge. The corresponding failure modes can be interpreted as those for which a state of equilibrium is no longer possible. The equations of motion are discretized in time, using an extension of the linear acceleration method. (Auth.)

  7. Analysis of the solution structure of Thermosynechococcus elongatus photosystem I in n-dodecyl-β-D-maltoside using small-angle neutron scattering and molecular dynamics simulation.

    Science.gov (United States)

    Le, Rosemary K; Harris, Bradley J; Iwuchukwu, Ifeyinwa J; Bruce, Barry D; Cheng, Xiaolin; Qian, Shuo; Heller, William T; O'Neill, Hugh; Frymier, Paul D

    2014-05-15

    Small-angle neutron scattering (SANS) and molecular dynamics (MD) simulation were used to investigate the structure of trimeric photosystem I (PSI) from Thermosynechococcus elongatus (T. elongatus) stabilized in n-dodecyl-β-d-maltoside (DDM) detergent solution. Scattering curves of detergent and protein-detergent complexes were measured at 18% D2O, the contrast match point for the detergent, and 100% D2O, allowing observation of the structures of protein/detergent complexes. It was determined that the maximum dimension of the PSI-DDM complex was consistent with the presence of a monolayer belt of detergent around the periphery of PSI. A dummy-atom reconstruction of the shape of the complex from the SANS data indicates that the detergent envelope has an irregular shape around the hydrophobic periphery of the PSI trimer rather than a uniform, toroidal belt around the complex. A 50 ns MD simulation model (a DDM ring surrounding the PSI complex with extra interstitial DDM) of the PSI-DDM complex was developed for comparison with the SANS data. The results suggest that DDM undergoes additional structuring around the membrane-spanning surface of the complex instead of a simple, relatively uniform belt, as is generally assumed for studies that use detergents to solubilize membrane proteins. Copyright © 2014 Elsevier Inc. All rights reserved.

  8. Reliability analysis and assessment of structural systems

    International Nuclear Information System (INIS)

    Yao, J.T.P.; Anderson, C.A.

    1977-01-01

    The study of structural reliability deals with the probability of having satisfactory performance of the structure under consideration within any specific time period. To pursue this study, it is necessary to apply available knowledge and methodology in structural analysis (including dynamics) and design, behavior of materials and structures, experimental mechanics, and the theory of probability and statistics. In addition, various severe loading phenomena such as strong motion earthquakes and wind storms are important considerations. For three decades now, much work has been done on reliability analysis of structures, and during this past decade, certain so-called 'Level I' reliability-based design codes have been proposed and are in various stages of implementation. These contributions will be critically reviewed and summarized in this paper. Because of the undesirable consequences resulting from the failure of nuclear structures, it is important and desirable to consider the structural reliability in the analysis and design of these structures. Moreover, after these nuclear structures are constructed, it is desirable for engineers to be able to assess the structural reliability periodically as well as immediately following the occurrence of severe loading conditions such as a strong-motion earthquake. During this past decade, increasing use has been made of techniques of system identification in structural engineering. On the basis of non-destructive test results, various methods have been developed to obtain an adequate mathematical model (such as the equations of motion with more realistic parameters) to represent the structural system

  9. Dynamical system analysis of interacting models

    Science.gov (United States)

    Carneiro, S.; Borges, H. A.

    2018-01-01

    We perform a dynamical system analysis of a cosmological model with linear dependence between the vacuum density and the Hubble parameter, with constant-rate creation of dark matter. We show that the de Sitter spacetime is an asymptotically stable critical point, future limit of any expanding solution. Our analysis also shows that the Minkowski spacetime is an unstable critical point, which eventually collapses to a singularity. In this way, such a prescription for the vacuum decay not only predicts the correct future de Sitter limit, but also forbids the existence of a stable Minkowski universe. We also study the effect of matter creation on the growth of structures and their peculiar velocities, showing that it is inside the current errors of redshift space distortions observations.

  10. Dynamic Numerical Analysis of Steel Footbridge

    Directory of Open Access Journals (Sweden)

    Major Maciej

    2017-06-01

    Full Text Available The study presents a numerical analysis of the arched footbridge designed in two variants, made of steel and aluminium. The first part presents the criteria for evaluation of the comfort of using the footbridges. The study examined the footbridge with arched design with span in the axis of 24 m and width of 1.4 m. Arch geometry was made as a part of the circle with radius of r = 20 m cut off with a chord with length equal to the calculation length of the girders. The model of the analysed footbridge was subjected to the dynamic effect of wind and the pedestrian traffic with variable flexibility. The analyses used Robot Structural Analysis software.

  11. Sensitivity analysis and its application for dynamic improvement

    Indian Academy of Sciences (India)

    Keywords. Sensitivity analysis; dynamic improvement structural modoficaton; laser beam printer; motorbike; disc drive; mechatronics; automobile engine. Abstract. In order to determine appropriate points where natural frequency or mode shape under consideration can be effectively modified by structural modification, the ...

  12. Nonparametric inference of network structure and dynamics

    Science.gov (United States)

    Peixoto, Tiago P.

    The network structure of complex systems determine their function and serve as evidence for the evolutionary mechanisms that lie behind them. Despite considerable effort in recent years, it remains an open challenge to formulate general descriptions of the large-scale structure of network systems, and how to reliably extract such information from data. Although many approaches have been proposed, few methods attempt to gauge the statistical significance of the uncovered structures, and hence the majority cannot reliably separate actual structure from stochastic fluctuations. Due to the sheer size and high-dimensionality of many networks, this represents a major limitation that prevents meaningful interpretations of the results obtained with such nonstatistical methods. In this talk, I will show how these issues can be tackled in a principled and efficient fashion by formulating appropriate generative models of network structure that can have their parameters inferred from data. By employing a Bayesian description of such models, the inference can be performed in a nonparametric fashion, that does not require any a priori knowledge or ad hoc assumptions about the data. I will show how this approach can be used to perform model comparison, and how hierarchical models yield the most appropriate trade-off between model complexity and quality of fit based on the statistical evidence present in the data. I will also show how this general approach can be elegantly extended to networks with edge attributes, that are embedded in latent spaces, and that change in time. The latter is obtained via a fully dynamic generative network model, based on arbitrary-order Markov chains, that can also be inferred in a nonparametric fashion. Throughout the talk I will illustrate the application of the methods with many empirical networks such as the internet at the autonomous systems level, the global airport network, the network of actors and films, social networks, citations among

  13. Structure and Dynamics of the Martian Magnetosphere

    Science.gov (United States)

    Halekas, J. S.; Brain, D. A.; Luhmann, J. G.; Mitchell, D. L.; Mazelle, C. X.; McFadden, J. P.; Connerney, J. E. P.; DiBraccio, G. A.; Espley, J. R.

    2017-12-01

    The Martian magnetosphere is formed by the interaction between the incident solar wind and the atmosphere, through a combination of mass-loading and induced currents. The resulting induced magnetosphere has a superficially similar structure to those of the other three inner planets, including a bow shock and foreshock, magnetosheath, and magnetotail regions. However, Mars' small size, greater distance from the Sun, different atmospheric chemistry, and the presence of strong localized crustal magnetism all lead to distinctly different characteristics from both intrinsic and other induced magnetospheres. We utilize Mars Atmosphere and Volatile EvolutioN (MAVEN) measurements to investigate fundamental measurables including the vector magnetic field and ion density, velocity, and temperature, as well as derived parameters including pressure gradient forces, magnetic pressure/tension forces, and motional electric fields. Thanks to the large number of orbits already completed by MAVEN, we have good coverage of the magnetosphere for a variety of seasons and solar wind inputs. We utilize superposed epoch analyses of observations made under different conditions to investigate the structure and dynamics of the Martian magnetosphere and determine how it varies with seasonal and solar influences. We find that parameters such as the solar wind Mach number and the interplanetary magnetic field affect both the structure of the magnetosphere and the morphology and relative importance of the different force terms.

  14. Application of partial differential equation modeling of the control/structural dynamics of flexible spacecraft

    Science.gov (United States)

    Taylor, Lawrence W., Jr.; Rajiyah, H.

    1991-01-01

    Partial differential equations for modeling the structural dynamics and control systems of flexible spacecraft are applied here in order to facilitate systems analysis and optimization of these spacecraft. Example applications are given, including the structural dynamics of SCOLE, the Solar Array Flight Experiment, the Mini-MAST truss, and the LACE satellite. The development of related software is briefly addressed.

  15. Sensitivity analysis of reactive ecological dynamics.

    Science.gov (United States)

    Verdy, Ariane; Caswell, Hal

    2008-08-01

    Ecological systems with asymptotically stable equilibria may exhibit significant transient dynamics following perturbations. In some cases, these transient dynamics include the possibility of excursions away from the equilibrium before the eventual return; systems that exhibit such amplification of perturbations are called reactive. Reactivity is a common property of ecological systems, and the amplification can be large and long-lasting. The transient response of a reactive ecosystem depends on the parameters of the underlying model. To investigate this dependence, we develop sensitivity analyses for indices of transient dynamics (reactivity, the amplification envelope, and the optimal perturbation) in both continuous- and discrete-time models written in matrix form. The sensitivity calculations require expressions, some of them new, for the derivatives of equilibria, eigenvalues, singular values, and singular vectors, obtained using matrix calculus. Sensitivity analysis provides a quantitative framework for investigating the mechanisms leading to transient growth. We apply the methodology to a predator-prey model and a size-structured food web model. The results suggest predator-driven and prey-driven mechanisms for transient amplification resulting from multispecies interactions.

  16. Plasma and current structures in dynamical pinches

    International Nuclear Information System (INIS)

    Butov, I.Ya.; Matveev, Yu.V.

    1981-01-01

    Dynamics of plasma layers and current structure in aZ-pinch device has been experimentally investigated. It is found that shaping of a main current envelope is ended with its explosion-like expansion, the pinch decaying after compression to separated current filaments. It is also shown that filling of a region outside the pinch with plasma and currents alternating in directions occurs owing to interaction of current loops (inductions) formed in a magnetic piston during its compression with reflected shock wave. Current circulating in the loops sometimes exceeds 1.5-2 times the current of discharge circuit. The phenomena noted appear during development of superheat instability and can be realized, for example, in theta-pinches, plasma focuses, tokamaks. The experiments were carried out at the Dynamic Zeta-pinch device at an energy reserse of up to 15 kJ (V 0 =24 kV) in a capacitor bank. Half-period of the discharge current is 9 μs; Isub(max)=3.5x10sup(5) A. Back current guide surrounding a china chamber of 28 cm diameter and 50 cm length is made in the form of a hollow cylinder. Initial chamber vacuum is 10 -6 torr [ru

  17. Dynamic structure factor of vibrating fractals.

    Science.gov (United States)

    Reuveni, Shlomi; Klafter, Joseph; Granek, Rony

    2012-02-10

    Motivated by novel experimental work and the lack of an adequate theory, we study the dynamic structure factor S(k,t) of large vibrating fractal networks at large wave numbers k. We show that the decay of S(k,t) is dominated by the spatially averaged mean square displacement of a network node, which evolves subdiffusively in time, ((u[over →](i)(t)-u[over →](i)(0))(2))∼t(ν), where ν depends on the spectral dimension d(s) and fractal dimension d(f). As a result, S(k,t) decays as a stretched exponential S(k,t)≈S(k)e(-(Γ(k)t)(ν)) with Γ(k)∼k(2/ν). Applications to a variety of fractal-like systems are elucidated.

  18. FINITE ELEMENT ANALYSIS OF STRUCTURES

    Directory of Open Access Journals (Sweden)

    PECINGINA OLIMPIA-MIOARA

    2015-05-01

    Full Text Available The application of finite element method is analytical when solutions can not be applied for deeper study analyzes static, dynamic or other types of requirements in different points of the structures .In practice it is necessary to know the behavior of the structure or certain parts components of the machine under the influence of certain factors static and dynamic . The application of finite element in the optimization of components leads to economic growth , to increase reliability and durability organs studied, thus the machine itself.

  19. Annual Report 1998: Chemical Structure and Dynamics

    Energy Technology Data Exchange (ETDEWEB)

    SD Colson; RS McDowell

    1999-05-10

    The Chemical Structure and Dynamics (CS&D) program is a major component of the William R. Wiley Environmental Molecular Sciences Labo- ratory (EMSL), developed by Pacific Northwest National Laboratory (PNNL) to provide a state-of- the-art collaborative facility for studies of chemical structure and dynamics. We respond to the need for a fundamental, molecular-level understanding of chemistry at a wide variety of environmentally important interfaces by (1) extending the experimental characterization and theoretical description of chemical reactions to encompass the effects of condensed media and interfaces; (2) developing a multidisciplinary capability for describing interracial chemical processes within which the new knowledge generated can be brought to bear on complex phenomena in envi- ronmental chemistry and in nuclear waste proc- essing and storage; and (3) developing state-of- the-art analytical methods for characterizing com- plex materials of the types found in stored wastes and contaminated soils, and for detecting and monitoring trace atmospheric species. Our program aims at achieving a quantitative understanding of chemical reactions at interfaces and, more generally, in condensed media, compa- rable to that currently available for gas-phase reactions. This understanding will form the basis for the development of a priori theories for pre- dicting macroscopic chemical behavior in con- densed and heterogeneous media, which will add significantly to the value of field-scale envi- ronmental models, predictions of short- and long- term nuclear waste storage stabilities, and other areas related to the primary missions of the U.S. Department of Energy (DOE).

  20. Chemical structure and dynamics. Annual report 1994

    Energy Technology Data Exchange (ETDEWEB)

    Colson, S.D.

    1995-07-01

    The Chemical Structure and Dynamics program was organized as a major component of Pacific Northwest Laboratory`s Environmental and Molecular Sciences Laboratory (EMSL), a state-of-the-art collaborative facility for studies of chemical structure and dynamics. Our program responds to the need for a fundamental, molecular-level understanding of chemistry at the wide variety of environmentally important interfaces by (1) extending the experimental characterization and theoretical description of chemical reactions to encompass the effects of condensed media and interfaces, and (2) developing a multidisciplinary capability for describing interfacial chemical processes within which the new knowledge generated can be brought to bear on complex phenomena in environmental chemistry and in nuclear waste processing and storage. This research effort was initiated in 1989 and will continue to evolve over the next few years into a program of rigorous studies of fundamental molecular processes in model systems, such as well-characterized surfaces, single-component solutions, clusters, and biological molecules; and studies of complex systems found in the environment (multispecies, multiphase solutions; solid/liquid, liquid/liquid, and gas/surface interfaces; colloidal dispersions; ultrafine aerosols; and functioning biological systems). The success of this program will result in the achievement of a quantitative understanding of chemical reactions at interfaces, and more generally in condensed media, that is comparable to that currently available for gas-phase reactions. This understanding will form the basis for the development of a priori theories for predictions of macroscopic chemical behavior in condensed and heterogeneous media, adding significantly to the value of field-scale environmental models, the prediction of short- and long-term nuclear waste storage stabilities, and other problems related to the primary missions of the DOE.

  1. Improving the Dynamic Characteristics of Body-in-White Structure Using Structural Optimization

    Directory of Open Access Journals (Sweden)

    Aizzat S. Yahaya Rashid

    2014-01-01

    Full Text Available The dynamic behavior of a body-in-white (BIW structure has significant influence on the noise, vibration, and harshness (NVH and crashworthiness of a car. Therefore, by improving the dynamic characteristics of BIW, problems and failures associated with resonance and fatigue can be prevented. The design objectives attempt to improve the existing torsion and bending modes by using structural optimization subjected to dynamic load without compromising other factors such as mass and stiffness of the structure. The natural frequency of the design was modified by identifying and reinforcing the structure at critical locations. These crucial points are first identified by topology optimization using mass and natural frequencies as the design variables. The individual components obtained from the analysis go through a size optimization step to find their target thickness of the structure. The thickness of affected regions of the components will be modified according to the analysis. The results of both optimization steps suggest several design modifications to achieve the target vibration specifications without compromising the stiffness of the structure. A method of combining both optimization approaches is proposed to improve the design modification process.

  2. Dynamic testing of nuclear power plant structures: an evaluation

    International Nuclear Information System (INIS)

    Weaver, H.J.

    1980-02-01

    Lawrence Livermore Laboratory (LLL) evaluated the applications of system identification techniques to the dynamic testing of nuclear power plant structures and subsystems. These experimental techniques involve exciting a structure and measuring, digitizing, and processing the time-history motions that result. The data can be compared to parameters calculated using finite element or other models of the test systems to validate the model and to verify the seismic analysis. This report summarizes work in three main areas: (1) analytical qualification of a set of computer programs developed at LLL to extract model parameters from the time histories; (2) examination of the feasibility of safely exciting nuclear power plant structures and accurately recording the resulting time-history motions; (3) study of how the model parameters that are extracted from the data be used best to evaluate structural integrity and analyze nuclear power plants

  3. Nonlinear Structural Analysis

    Indian Academy of Sciences (India)

    This special issue of Sadhana is a collection of five papers selected from those presented at the Eighth National Seminar on Aerospace Structures (8th NASAS) organised by and held at the Indian Institute of Technology Madras, Chennai, on 9±10 October 1998. The Structures Panel of the Aeronautics Research and ...

  4. Static Analysis of Dynamic Languages

    DEFF Research Database (Denmark)

    Madsen, Magnus

    with static type systems, such as Java and C# , but the same features are rarely available for dynamic languages such as JavaScript. The aim of this thesis is to investigate techniques for improving the tool- support for dynamic programming languages without imposing any artificial restrictions...

  5. Molecular Dynamics Simulations and Structural Analysis to Decipher Functional Impact of a Twenty Residue Insert in the Ternary Complex of Mus musculus TdT Isoform.

    Science.gov (United States)

    Mutt, Eshita; Sowdhamini, Ramanathan

    2016-01-01

    Insertions/deletions are common evolutionary tools employed to alter the structural and functional repertoire of protein domains. An insert situated proximal to the active site or ligand binding site frequently impacts protein function; however, the effect of distal indels on protein activity and/or stability are often not studied. In this paper, we have investigated a distal insert, which influences the function and stability of a unique DNA polymerase, called terminal deoxynucleotidyl transferase (TdT). TdT (EC:2.7.7.31) is a monomeric 58 kDa protein belonging to family X of eukaryotic DNA polymerases and known for its role in V(D)J recombination as well as in non-homologous end-joining (NHEJ) pathways. Two murine isoforms of TdT, with a length difference of twenty residues and having different biochemical properties, have been studied. All-atom molecular dynamics simulations at different temperatures and interaction network analyses were performed on the short and long-length isoforms. We observed conformational changes in the regions distal to the insert position (thumb subdomain) in the longer isoform, which indirectly affects the activity and stability of the enzyme through a mediating loop (Loop1). A structural rationale could be provided to explain the reduced polymerization rate as well as increased thermosensitivity of the longer isoform caused by peripherally located length variations within a DNA polymerase. These observations increase our understanding of the roles of length variants in introducing functional diversity in protein families in general.

  6. Genomic and proteomic analysis with dynamically growing self ...

    African Journals Online (AJOL)

    The artificial system to be recommended here is to be determined from the analysis and selection of the best of different available technologies currently being used or reviewed for microarray data analysis. The system proposed here is a tree structure, a new hierarchical clustering algorithm called a dynamically growing ...

  7. Indoor footstep localization from structural dynamics instrumentation

    Science.gov (United States)

    Poston, Jeffrey D.; Buehrer, R. Michael; Tarazaga, Pablo A.

    2017-05-01

    Measurements from accelerometers originally deployed to measure a building's structural dynamics can serve a new role: locating individuals moving within a building. Specifically, this paper proposes measurements of footstep-generated vibrations as a novel source of information for localization. The complexity of wave propagation in a building (e.g., dispersion and reflection) limits the utility of existing algorithms designed to locate, for example, the source of sound in a room or radio waves in free space. This paper develops enhancements for arrival time determination and time difference of arrival localization in order to address the complexities posed by wave propagation within a building's structure. Experiments with actual measurements from an instrumented public building demonstrate the potential of locating footsteps to sub-meter accuracy. Furthermore, this paper explains how to forecast performance in other buildings with different sensor configurations. This localization capability holds the potential to assist public safety agencies in building evacuation and incidence response, to facilitate occupancy-based optimization of heating or cooling and to inform facility security.

  8. NAPS: Network Analysis of Protein Structures

    Science.gov (United States)

    Chakrabarty, Broto; Parekh, Nita

    2016-01-01

    Traditionally, protein structures have been analysed by the secondary structure architecture and fold arrangement. An alternative approach that has shown promise is modelling proteins as a network of non-covalent interactions between amino acid residues. The network representation of proteins provide a systems approach to topological analysis of complex three-dimensional structures irrespective of secondary structure and fold type and provide insights into structure-function relationship. We have developed a web server for network based analysis of protein structures, NAPS, that facilitates quantitative and qualitative (visual) analysis of residue–residue interactions in: single chains, protein complex, modelled protein structures and trajectories (e.g. from molecular dynamics simulations). The user can specify atom type for network construction, distance range (in Å) and minimal amino acid separation along the sequence. NAPS provides users selection of node(s) and its neighbourhood based on centrality measures, physicochemical properties of amino acids or cluster of well-connected residues (k-cliques) for further analysis. Visual analysis of interacting domains and protein chains, and shortest path lengths between pair of residues are additional features that aid in functional analysis. NAPS support various analyses and visualization views for identifying functional residues, provide insight into mechanisms of protein folding, domain-domain and protein–protein interactions for understanding communication within and between proteins. URL:http://bioinf.iiit.ac.in/NAPS/. PMID:27151201

  9. Reliability analysis of prestressed concrete containment structures

    International Nuclear Information System (INIS)

    Jiang, J.; Zhao, Y.; Sun, J.

    1993-01-01

    The reliability analysis of prestressed concrete containment structures subjected to combinations of static and dynamic loads with consideration of uncertainties of structural and load parameters is presented. Limit state probabilities for given parameters are calculated using the procedure developed at BNL, while that with consideration of parameter uncertainties are calculated by a fast integration for time variant structural reliability. The limit state surface of the prestressed concrete containment is constructed directly incorporating the prestress. The sensitivities of the Choleskey decomposition matrix and the natural vibration character are calculated by simplified procedures. (author)

  10. Structures and their analysis

    CERN Document Server

    Fuchs, Maurice Bernard

    2016-01-01

    Addressing structures, this book presents a classic discipline in a modern setting by combining illustrated examples with insights into the solutions. It is the fruit of the author’s many years of teaching the subject and of just as many years of research into the design of optimal structures. Although intended for an advanced level of instruction it has an undergraduate course at its core. Further, the book was written with the advantage of having massive computer power in the background, an aspect which changes the entire approach to many engineering disciplines and in particular to structures. This paradigm shift has dislodged the force (flexibility) method from its former prominence and paved the way for the displacement (stiffness) method, despite the multitude of linear equations it spawns. In this book, however, both methods are taught: the force method offers a perfect vehicle for understanding structural behavior, bearing in mind that it is the displacement method which does the heavy number crunch...

  11. Bioinspired, dynamic, structured surfaces for biofilm prevention

    Science.gov (United States)

    Epstein, Alexander K.

    Bacteria primarily exist in robust, surface-associated communities known as biofilms, ubiquitous in both natural and anthropogenic environments. Mature biofilms resist a wide range of biocidal treatments and pose persistent pathogenic threats. Treatment of adherent biofilm is difficult, costly, and, in medical systems such as catheters, frequently impossible. Adding to the challenge, we have discovered that biofilm can be both impenetrable to vapors and extremely nonwetting, repelling even low surface tension commercial antimicrobials. Our study shows multiple contributing factors, including biochemical components and multiscale reentrant topography. Reliant on surface chemistry, conventional strategies for preventing biofilm only transiently affect attachment and/or are environmentally toxic. In this work, we look to Nature's antifouling solutions, such as the dynamic spiny skin of the echinoderm, and we develop a versatile surface nanofabrication platform. Our benchtop approach unites soft lithography, electrodeposition, mold deformation, and material selection to enable many degrees of freedom—material, geometric, mechanical, dynamic—that can be programmed starting from a single master structure. The mechanical properties of the bio-inspired nanostructures, verified by AFM, are precisely and rationally tunable. We examine how synthetic dynamic nanostructured surfaces control the attachment of pathogenic biofilms. The parameters governing long-range patterning of bacteria on high-aspect-ratio (HAR) nanoarrays are combinatorially elucidated, and we discover that sufficiently low effective stiffness of these HAR arrays mechanoselectively inhibits ˜40% of Pseudomonas aeruginosa biofilm attachment. Inspired by the active echinoderm skin, we design and fabricate externally actuated dynamic elastomer surfaces with active surface microtopography. We extract from a large parameter space the critical topographic length scales and actuation time scales for achieving

  12. Collapse Analysis of Timber Structures

    DEFF Research Database (Denmark)

    Kirkegaard, Poul Henning; Sørensen, John Dalsgaard

    2008-01-01

    to criteria a) and b) the timber frame structure has one column with a reliability index a bit lower than an assumed target level. By removal three columns one by one no significant extensive failure of the entire structure or significant parts of it are obtained. Therefore the structure can be considered......A probabilistic based collapse analysis has been performed for a glulam frame structure supporting the roof over the main court in a Norwegian sports centre. The robustness analysis is based on the framework for robustness analysis introduced in the Danish Code of Practice for the Safety...... of Structures and a probabilistic modelling of the timber material proposed in the Probabilistic Model Code (PMC) of the Joint Committee on Structural Safety (JCSS). Due to the framework in the Danish Code the timber structure has to be evaluated with respect to the following criteria where at least one shall...

  13. Nonlinear Structural Analysis

    Indian Academy of Sciences (India)

    at the Indian Institute of Technology Madras, Chennai, on 9±10 October 1998. The Structures Panel of the ... have pushed frontiers of technology to such extents that linear theories no longer suffice. This is the case in ... In the second paper, Krishnam Raju and Nagabhushanam extend the Integrated Force. Method (IFM) of ...

  14. Molecular Dynamics Simulations and Structural Analysis to Decipher Functional Impact of a Twenty Residue Insert in the Ternary Complex of Mus musculus TdT Isoform.

    Directory of Open Access Journals (Sweden)

    Eshita Mutt

    Full Text Available Insertions/deletions are common evolutionary tools employed to alter the structural and functional repertoire of protein domains. An insert situated proximal to the active site or ligand binding site frequently impacts protein function; however, the effect of distal indels on protein activity and/or stability are often not studied. In this paper, we have investigated a distal insert, which influences the function and stability of a unique DNA polymerase, called terminal deoxynucleotidyl transferase (TdT. TdT (EC:2.7.7.31 is a monomeric 58 kDa protein belonging to family X of eukaryotic DNA polymerases and known for its role in V(DJ recombination as well as in non-homologous end-joining (NHEJ pathways. Two murine isoforms of TdT, with a length difference of twenty residues and having different biochemical properties, have been studied. All-atom molecular dynamics simulations at different temperatures and interaction network analyses were performed on the short and long-length isoforms. We observed conformational changes in the regions distal to the insert position (thumb subdomain in the longer isoform, which indirectly affects the activity and stability of the enzyme through a mediating loop (Loop1. A structural rationale could be provided to explain the reduced polymerization rate as well as increased thermosensitivity of the longer isoform caused by peripherally located length variations within a DNA polymerase. These observations increase our understanding of the roles of length variants in introducing functional diversity in protein families in general.

  15. Simulating CubeSat Structure Deployment Dynamics, Phase I

    Data.gov (United States)

    National Aeronautics and Space Administration — There is high value in simulating the nonlinear dynamics of stowing, deploying, and performance of deployable space structures, especially given the profound...

  16. Static and Dynamic Structure Analyses of Polymer Crystals

    Science.gov (United States)

    Tashiro, Kohji

    Recent development in static and dynamic structure analyses of polymer crystals has been reviewed. Various methods were developed to enhance the reliability of static structure analysis. Usage of synchrotron high-energy X-ray beam allowed us to increase the total number of observed X-ray reflections by one order. Wide-angle neutron diffraction revealed the hydrogen atomic positions accurately, making it possible to evaluate the mechanical property of polymer crystals quantitatively. Time-resolved measurements of wide-angle and small-angle X-ray scatterings as well as infrared and Raman spectra have revealed the structural revolution processes as seen in the studies of isothermal crystallization and mechanical deformation processes.

  17. Static and dynamic structure analyses of polymer crystals

    International Nuclear Information System (INIS)

    Tashiro, Kohji

    2011-01-01

    Recent development in static and dynamic structure analyses of polymer crystals has been reviewed. Various methods were developed to enhance the reliability of static structure analysis. Usage of synchrotron high-energy X-ray beam allowed us to increase the total number of observed X-ray reflections by one order. Wide-angle neutron diffraction revealed the hydrogen atomic positions accurately, making it possible to evaluate the mechanical property of polymer crystals quantitatively. Time-resolved measurements of wide-angle and small-angle X-ray scatterings as well as infrared and Raman spectra have revealed the structural revolution processes as seen in the studies of isothermal crystallization and mechanical deformation processes. (author)

  18. Automatic anatomical structures location based on dynamic shape measurement

    Science.gov (United States)

    Witkowski, Marcin; Rapp, Walter; Sitnik, Robert; Kujawinska, Malgorzata; Vander Sloten, Jos; Haex, Bart; Bogaert, Nico; Heitmann, Kjell

    2005-09-01

    New image processing methods and active photonics apparatus have made possible the development of relatively inexpensive optical systems for complex shape and object measurements. We present dynamic 360° scanning method for analysis of human lower body biomechanics, with an emphasis on the analysis of the knee joint. The anatomical structure (of high medical interest) that is possible to scan and analyze, is patella. Tracking of patella position and orientation under dynamic conditions may lead to detect pathological patella movements and help in knee joint disease diagnosis. The processed data is obtained from a dynamic laser triangulation surface measurement system, able to capture slow to normal movements with a scan frequency between 15 and 30 Hz. These frequency rates are enough to capture controlled movements used e.g. for medical examination purposes. The purpose of the work presented is to develop surface analysis methods that may be used as support of diagnosis of motoric abilities of lower limbs. The paper presents algorithms used to process acquired lower limbs surface data in order to find the position and orientation of patella. The algorithms implemented include input data preparation, curvature description methods, knee region discrimination and patella assumed position/orientation calculation. Additionally, a method of 4D (3D + time) medical data visualization is proposed. Also some exemplary results are presented.

  19. Structural systems reliability analysis

    International Nuclear Information System (INIS)

    Frangopol, D.

    1975-01-01

    For an exact evaluation of the reliability of a structure it appears necessary to determine the distribution densities of the loads and resistances and to calculate the correlation coefficients between loads and between resistances. These statistical characteristics can be obtained only on the basis of a long activity period. In case that such studies are missing the statistical properties formulated here give upper and lower bounds of the reliability. (orig./HP) [de

  20. A Comparative Study on Optimal Structural Dynamics Using Wavelet Functions

    Directory of Open Access Journals (Sweden)

    Seyed Hossein Mahdavi

    2015-01-01

    Full Text Available Wavelet solution techniques have become the focus of interest among researchers in different disciplines of science and technology. In this paper, implementation of two different wavelet basis functions has been comparatively considered for dynamic analysis of structures. For this aim, computational technique is developed by using free scale of simple Haar wavelet, initially. Later, complex and continuous Chebyshev wavelet basis functions are presented to improve the time history analysis of structures. Free-scaled Chebyshev coefficient matrix and operation of integration are derived to directly approximate displacements of the corresponding system. In addition, stability of responses has been investigated for the proposed algorithm of discrete Haar wavelet compared against continuous Chebyshev wavelet. To demonstrate the validity of the wavelet-based algorithms, aforesaid schemes have been extended to the linear and nonlinear structural dynamics. The effectiveness of free-scaled Chebyshev wavelet has been compared with simple Haar wavelet and two common integration methods. It is deduced that either indirect method proposed for discrete Haar wavelet or direct approach for continuous Chebyshev wavelet is unconditionally stable. Finally, it is concluded that numerical solution is highly benefited by the least computation time involved and high accuracy of response, particularly using low scale of complex Chebyshev wavelet.

  1. Flexible joints in structural and multibody dynamics

    Directory of Open Access Journals (Sweden)

    O. A. Bauchau

    2013-02-01

    Full Text Available Flexible joints, sometimes called bushing elements or force elements, are found in all structural and multibody dynamics codes. In their simplest form, flexible joints simply consist of sets of three linear and three torsional springs placed between two nodes of the model. For infinitesimal deformations, the selection of the lumped spring constants is an easy task, which can be based on a numerical simulation of the joint or on experimental measurements. If the joint undergoes finite deformations, identification of its stiffness characteristics is not so simple, specially if the joint is itself a complex system. When finite deformations occur, the definition of deformation measures becomes a critical issue. This paper proposes a family of tensorial deformation measures suitable for elastic bodies of finite dimension. These families are generated by two parameters that can be used to modify the constitutive behavior of the joint, while maintaining the tensorial nature of the deformation measures. Numerical results demonstrate the objectivity of the deformations measures, a feature that is not shared by the deformations measures presently used in the literature. The impact of the choice of the two parameters on the constitutive behavior of the flexible joint is also investigated.

  2. Dynamical structure of linearized GL(4) gravities

    International Nuclear Information System (INIS)

    Aragone, C.; Restuccia, A.

    1978-01-01

    The physical content of the three more natural models of GL(4) gravity is analyzed, for the case of weak fields. It is shown that the first model is the linearized version of Yang's one-tensor-field gravity and is a scalar-tensor theory, with its scalar part contained in a symmetric tensor. The second and the third linearized models, which can both be derived from the fourth-order action postulated by Yang, are two-tensor decoupled systems. In both cases one of the tensors is the symmetric weak metric gravity tensor field. the second tensor appearing in these two models, representing the GL(4)-gauge field, is either a linearized symmetric affinity (in the second model) or a linearized but nonsymmetric affinity (for the third model). It is shown that in these last two cases the affinity contains a helicity-3 propagating field. Owing to the presence of helicity-3 fields it is shown that it is better to regard Yang's action as an action for a two-tensor system instead of trying to recover from a pure gravity (one-tensor-field) action. Finally, it is shown what is the dynamical structure of the second and third linearized two-tensor models which can be derived from Yang's action. (author)

  3. The dynamics and structures of adsorbed surfaces

    International Nuclear Information System (INIS)

    Nielsen, M.; Ellenson, W.D.; McTague, J.P.

    1978-01-01

    This article reviews neutron scattering work performed on films of simple gas atoms and molecules adsorbed primarily on graphite surfaces. Exfoliated graphite substrates such as Grafoil were first used in this kind of measurements about five years ago and new results have been reported at an increasing pace. Elastic neutron diffraction measurements, determining the two-dimensional structural ordering of the adsorbed films, have been performed on layers of N 2 , Ar, H 2 , D 2 , O 2 , Kr, and He. Measurements on layers of larger molecules such as CD 4 and ND 3 have been reported very recently. Inelastic neutron scattering measurements, studying the dynamics of the adsorbed films are only possible in a few especially favourable cases such as 36 Ar and D 2 films, where the coherent phonon scattering cross-sections are very large. In other cases incoherent scattering from hydrogen can give information about e.g. the mobility of molecules such as NH 3 or the internal modes of adsorbed molecules such as C 4 H 10 . Neutron scattering measurements where substrates other than graphite products are used as the adsorbents will not be reviewed here. However, the power of the technique will be demonstrated in an example of H 2 physisorbed to activated alumina and in an example where hydrogen is chemisorbed to Raney nickel. (author)

  4. Survival analysis following dynamic randomization

    Directory of Open Access Journals (Sweden)

    Xiaolong Luo

    2016-08-01

    Full Text Available In this paper, we propose a method to analyze survival data from a clinical trial that utilizes a dynamic randomization for subject enrollment. The method directly accounts for dynamic subject randomization process using a marked point process (MPP. Its corresponding martingale process is used to formulate an equation for estimating the treatment effect size and for hypothesis testing. We perform simulation analyses to evaluate the outcomes of the proposed method as well as the conventional log rank method and re-randomized testing procedure.

  5. Collapse Analysis of Timber Structures

    DEFF Research Database (Denmark)

    Kirkegaard, Poul Henning; Sørensen, John Dalsgaard

    2008-01-01

    A probabilistic based collapse analysis has been performed for a glulam frame structure supporting the roof over the main court in a Norwegian sports centre. The robustness analysis is based on the framework for robustness analysis introduced in the Danish Code of Practice for the Safety...... be fulfilled: a) demonstrating that those parts of the structure essential for the safety only have little sensitivity with respect to unintentional loads and defects, or b) demonstrating a load case with „removal of a limited part of the structure‟ in order to document that an extensive failure...... of the structure will not occur if a limited part of the structure fails, or c) demonstrating sufficient safety of key elements, such that the entire structure with one or more key elements has the same reliability as a structure where robustness is documented by b). Based on investigations with respect...

  6. Structural dynamic and resistance to nuclear air blast

    International Nuclear Information System (INIS)

    Qureshi, S.M.

    2003-01-01

    A need exists to design protective shelters attached to specialized facilities against nuclear airbursts, explosive shocks and impacting projectiles. Designing such structures against nuclear and missile impact is a challenging task that needs to be looked into for design methodology formulation and practicability. Structures can be designed for overpressure pulsed generated by a nuclear explosion as well as the scabbing and perforation/punching of an impacting projectile. This paper discuses and formulates the methods of dynamic analysis and design required to undertake such a task. Structural resistance to peak overpressure pulse for a 20 KT weapons and smaller tactical nuclear weapons of 1 KT (16 psi, overpressure) size as a direct air blast overpressure has been considered in design of walls, beams and slabs of a special structure under review. The design of shear reinforcement as lacing is also carried out. Adopting the philosophy of strengthening and hardening can minimize the effect of air blast overpressure and projectile impact. The objective is to avoid a major structural failure. The structure then needs to be checked against ballistic penetration by a range of weapons or be required to resist explosive penetration from the charge detonated in contact with the structure. There is also a dire need to formulate protective guidelines for all existing and future critical facilities. (author)

  7. Knottin cyclization: impact on structure and dynamics

    Directory of Open Access Journals (Sweden)

    Gracy Jérôme

    2008-12-01

    Full Text Available Abstract Background Present in various species, the knottins (also referred to as inhibitor cystine knots constitute a group of extremely stable miniproteins with a plethora of biological activities. Owing to their small size and their high stability, knottins are considered as excellent leads or scaffolds in drug design. Two knottin families contain macrocyclic compounds, namely the cyclotides and the squash inhibitors. The cyclotide family nearly exclusively contains head-to-tail cyclized members. On the other hand, the squash family predominantly contains linear members. Head-to-tail cyclization is intuitively expected to improve bioactivities by increasing stability and lowering flexibility as well as sensitivity to proteolytic attack. Results In this paper, we report data on solution structure, thermal stability, and flexibility as inferred from NMR experiments and molecular dynamics simulations of a linear squash inhibitor EETI-II, a circular squash inhibitor MCoTI-II, and a linear analog lin-MCoTI. Strikingly, the head-to-tail linker in cyclic MCoTI-II is by far the most flexible region of all three compounds. Moreover, we show that cyclic and linear squash inhibitors do not display large differences in structure or flexibility in standard conditions, raising the question as to why few squash inhibitors have evolved into cyclic compounds. The simulations revealed however that the cyclization increases resistance to high temperatures by limiting structure unfolding. Conclusion In this work, we show that, in contrast to what could have been intuitively expected, cyclization of squash inhibitors does not provide clear stability or flexibility modification. Overall, our results suggest that, for squash inhibitors in standard conditions, the circularization impact might come from incorporation of an additional loop sequence, that can contribute to the miniprotein specificity and affinity, rather than from an increase in conformational rigidity

  8. Dynamics of vortex structures in a stratified rotating fluid

    CERN Document Server

    Sokolovskiy, Mikhail A

    2013-01-01

    This book presents an extensive analysis of the dynamics of discrete and distributed baroclinic vortices in a multi-layer fluid that characterizes the main features of the large and mesoscales dynamics of the atmosphere and the ocean.

  9. Introducing fluid dynamics using dimensional analysis

    DEFF Research Database (Denmark)

    Jensen, Jens Højgaard

    2013-01-01

    Many aspects of fluid dynamics can be introduced using dimensional analysis, combined with some basic physical principles. This approach is concise and allows exploration of both the laminar and turbulent limits—including important phenomena that are not normally dealt with when fluid dynamics...

  10. Dynamic Analysis of Composite Rotors

    Directory of Open Access Journals (Sweden)

    S. P. Singh

    1996-01-01

    accounted for. Material damping is also taken into account. The layerwise theory is compared with conventionally used equivalent modulus beam theory. Some interesting case studies are presented. The effect of various parameters on dynamic behavior and stability of a composite rotor is presented.

  11. Elementary derivation of Poisson structures for fluid dynamics and electrodynamics

    International Nuclear Information System (INIS)

    Kaufman, A.N.

    1982-01-01

    The canonical Poisson structure of the microscopic Lagrangian is used to deduce the noncanonical Poisson structure for the macroscopic Hamiltonian dynamics of a compressible neutral fluid and of fluid electrodynamics

  12. The stability and dynamic behaviour of fluid-loaded structures

    CSIR Research Space (South Africa)

    Suliman, Ridhwaan

    2015-07-01

    Full Text Available ECCOMAS Young Investigators Conference 6th GACM Colloquium, July 20–23, 2015, Aachen, Germany The stability and dynamic behaviour of fluid-loaded structures R. Suliman, N. Peake Abstract. The deformation of slender elastic structures due...

  13. Analysis of quantum structures using ion microbeam

    International Nuclear Information System (INIS)

    Chakraborty, Purushottam

    2007-01-01

    The fundamental challenge in surface analysis is the quantitative characterization of the elemental composition and chemical structure of surfaces with the highest sensitivity and spatial resolution. The flexibility of sputter sectioning, in combination with the principal advantages of the mass spectrometric techniques, such as large dynamic ranges both in the mass separation and detection systems, has enabled the dynamic Secondary Ion Mass spectrometry (SIMS) to be an extremely sensitive technique for the analysis of solid surfaces and thin films. SIMS depth profiling is now possible at depth resolutions down to ∼ 2 nm with quantification data obtainable from the topmost atomic layer onwards into the depth. The interface widths obtained from depth profiles are related to the induced surface roughness at the interfaces. With optimized ion bombardment conditions, like extremely low beam currents (down to ∼ 10 nA), low ion energies (below 1 keV) and appropriate impact angles, ultra-high resolution SIMS depth profiling has enabled interfacial composition analysis of ultra-thin films, quantum wells, hetero-structures, etc. and complex low-dimensional structures with high precision and repeatability. The talk will address some of our recent experiments on high depth- resolution SIMS analysis of Bragg mirrors, quantum wells and interface alloying in metallic multilayer structures. (author)

  14. Enhancing Green Absorptive Capacity, Green Dynamic Capacities and Green Service Innovation to Improve Firm Performance: An Analysis of Structural Equation Modeling (SEM

    Directory of Open Access Journals (Sweden)

    Yu-Shan Chen

    2015-11-01

    Full Text Available This study discusses the influences of green absorptive capacity, green dynamic capacities, and green service innovation on firm performance. In order to fill the research gap, this study proposes the concept of green service innovation. The results are as follows: First, this study finds that green absorptive capacity has positive effects on green dynamic capacities, green service innovation, and firm performance. Second, this study points out that green dynamic capacities have positive effects on green service innovation and firm performance. Third, this study observes that green dynamic capacities and green service innovation intercede the positive connection between green absorptive capacity and firm performance.

  15. Dynamic modelling and analysis of space webs

    Science.gov (United States)

    Yu, Yang; Baoyin, HeXi; Li, JunFeng

    2011-04-01

    Future space missions demand operations on large flexible structures, for example, space webs, the lightweight cable nets deployable in space, which can serve as platforms for very large structures or be used to capture orbital objects. The interest in research on space webs is likely to increase in the future with the development of promising applications such as Furoshiki sat-ellite of JAXA, Robotic Geostationary Orbit Restorer (ROGER) of ESA and Grapple, Retrieve And Secure Payload (GRASP) of NASA. Unlike high-tensioned nets in civil engineering, space webs may be low-tensioned or tensionless, and extremely flexible, owing to the microgravity in the orbit and the lack of support components, which may cause computational difficulties. Mathematical models are necessary in the analysis of space webs, especially in the conceptual design and evaluation for prototypes. A full three-dimensional finite element (FE) model was developed in this work. Trivial truss elements were adopted to reduce the computational complexity. Considering cable is a compression-free material and its tensile stiffness is also variable, we introduced the cable material constitutive relationship to work out an accurate and feasible model for prototype analysis and design. In the static analysis, the stress distribution and global deformation of the webs were discussed to get access to the knowledge of strength of webs with different types of meshes. In the dynamic analysis, special attention was paid to the impact problem. The max stress and global deformation were investigated. The simulation results indicate the interesting phenomenon which may be worth further research.

  16. Mutation-based structural modification and dynamics study of amyloid beta peptide (1–42: An in-silico-based analysis to cognize the mechanism of aggregation

    Directory of Open Access Journals (Sweden)

    Pritam Kumar Panda

    2016-03-01

    Full Text Available Alzheimer's disease is the prevalent cause of premature senility, a progressive mental disorder due to degeneration in brain and deposition of amyloid β peptide (1–42, a misfolded protein in the form of aggregation that prevails for a prolonged time and obstructs every aspect of life. One of the primary hallmarks of the neuropathological disease is the accretion of amyloid β peptide in the brain that leads to Alzheimer's disease, but the mechanism is still a mystery. Several investigations have shown that mutations at specific positions have a significant impact in stability of the peptide as predicted from aggregation profiles. Here in our study, we have analyzed the mutations by substituting residues at position A22G, E22G, E22K, E22Q, D23N, L34V and molecular dynamics have been performed to check the deviation in stability and conformation of the peptide. The results validated that the mutations at specific positions lead to instability and the proline substitution at E22P and L34P stalled the aggregation of the peptide. Keywords: Amyloid β peptide, Alzheimer's disease, Aggregation, Mutational analysis, NAMD, UCSF Chimera, Discovery Studio Visualizer

  17. Structure and dynamics of alkali borate glasses: a molecular dynamics study

    NARCIS (Netherlands)

    Verhoef, A.H; den Hartog, H. W.

    Structural and dynamical properties of lithium, cesium and mixed alkali (i.e., lithium and cesium) borate glasses have been studied by the molecular dynamics method. The calculations yield glass structures consisting of planar BO3 triangles and BO4 tetrahedrons with no sixfold ring structures at

  18. Evaluation of dynamic testing of as-built civil engineering structures

    International Nuclear Information System (INIS)

    Srinivasan, M.G.; Kot, C.A.; Hsieh, B.J.

    1985-01-01

    This paper summarizes an evaluation of dynamic tests performed on large as-built structures. The objectives and methods (excitation and data analysis) of tests are reviewed. The utility and limitations of dynamic testing in light of actual experience is discussed. Though low-level tests in themselves will not be useful for predicting structural response to strong ground motion, they are useful for verifying linear models and for clarifying physical phenomena related to soil-structure interaction

  19. Modeling the metastable dynamics of correlated structures

    Science.gov (United States)

    Shakirov, Alexey M.; Tsibulsky, Sergey V.; Antipov, Andrey E.; Shchadilova, Yulia E.; Rubtsov, Alexey N.

    2015-01-01

    Metastable quantum dynamics of an asymmetric triangular cluster that is coupled to a reservoir is investigated. The dynamics is governed by bath-mediated transitions, which in part require a thermal activation process. The decay rate is controlled by tuning the excitation spectrum of the frustrated cluster. We use the master equation approach and construct transition operators in terms of many-body states. We analyze dynamics of observables and reveal metastability of an excited state and of a magnetically polarized ground state.

  20. A STRUCTURED APPROACH TO VOICE RANGE PROFILE (PHONETOGRAM) ANALYSIS

    NARCIS (Netherlands)

    SULTER, AM; WIT, HP; SCHUTTE, HK; MILLER, DG

    1994-01-01

    A new method to analyze voice range profiles (phonetograms) is described. The structured analysis is based on quantitatively determining the features: shape, area, and ''speaking range'' dynamics, without distorting the shape of phonetograms. The parameter sets describing these features are

  1. The first phylogeographic population structure and analysis of transmission dynamics of M. africanum West African 1--combining molecular data from Benin, Nigeria and Sierra Leone.

    Directory of Open Access Journals (Sweden)

    Florian Gehre

    Full Text Available Mycobacterium africanum is an important cause of tuberculosis (TB in West Africa. So far, two lineages called M. africanum West African 1 (MAF1 and M. africanum West African 2 (MAF2 have been defined. Although several molecular studies on MAF2 have been conducted to date, little is known about MAF1. As MAF1 is mainly present in countries around the Gulf of Guinea we aimed to estimate its prevalence in Cotonou, the biggest city in Benin. Between 2005-06 we collected strains in Cotonou/Benin and genotyped them using spoligo- and 12-loci-MIRU-VNTR-typing. Analyzing 194 isolates, we found that 31% and 6% were MAF1 and MAF2, respectively. Therefore Benin is one of the countries with the highest prevalence (37% of M. africanum in general and MAF1 in particular. Moreover, we combined our data from Benin with publicly available genotyping information from Nigeria and Sierra Leone, and determined the phylogeographic population structure and genotypic clustering of MAF1. Within the MAF1 lineage, we identified an unexpected great genetic variability with the presence of at least 10 sub-lineages. Interestingly, 8 out of 10 of the discovered sub-lineages not only clustered genetically but also geographically. Besides showing a remarkable local restriction to certain regions in Benin and Nigeria, the sub-lineages differed dramatically in their capacity to transmit within the human host population. While identifying Benin as one of the countries with the highest overall prevalence of M. africanum, this study also contains the first detailed description of the transmission dynamics and phylogenetic composition of the MAF1 lineage.

  2. Dynamic Wireless Power Transfer - Grid Impacts Analysis

    Energy Technology Data Exchange (ETDEWEB)

    Markel, Tony; Meintz, Andrew; Gonder, Jeff

    2015-12-04

    This presentation discusses the current status of analysis of the electricity grid impacts of a dynamic wireless power transfer system deployed to the Atlanta region on select high traffic roadway segments.

  3. Comparative analysis of the spatio-temporal dynamics of rotifer community structure based on taxonomic indices and functional groups in two subtropical lakes.

    Science.gov (United States)

    Wen, Xinli; Zhai, Pan; Feng, Ruonan; Yang, Ruijie; Xi, Yilong

    2017-04-03

    Little research has focused on how rotifer communities respond to eutrophication based on their combined taxonomic and functional indices. In this research, the relationship of the environment and rotifer communities was comparatively investigated in two subtropical lakes over one year. The taxon-based indices, including species number (S), Margalef index (D), Simpson index (d), Shannon-wiener index (H'), and functional traits relying on the guild ratio (GR) and the modified guild ratio (GR') from the moderately eutrophic Lake Xiyanghu were significantly lower than those from the slightly eutrophic Lake Jinghu. Redundancy analysis (RDA) showed that both lakes were distinct from each other. Taken together, the findings indicate that trophic state was an important factor affecting rotifer community structure. In addition, the average annual GR' of Lake Xiyanghu was trophic state and the rotifer community in seriously eutrophic lakes.

  4. Dynamics and structure of ignition process in plasma. Ignition dynamics and structure of laboratory plasmas

    International Nuclear Information System (INIS)

    Nagasaki, Kazunobu; Takamura, Shuichi; Razzak, Md. Abdur; Uesugi, Yoshihiko; Yoshimura, Yasuo; Cappa, Alvaro

    2008-01-01

    The dynamics and structure of plasma production are stated by the results of two experiments such as the radio frequency thermal plasmas produced by inductively coupled plasma technique at atmospheric pressure and the second harmonic ECH. The first experiment results explained transition from the electrostatic discharge mode of forming streamer to the induced discharge mode after forming the discharge channel that the streamer connected to in the azimuth direction. The other experiment explained the dynamics which the initial plasma produced at the ECH resonance point spread in the direction of radius. The divergence and transition related to the nonlinear process were observed independently existing the magnetic field or incident power. The experiment devices, conditions, results, and modeling are reported. (S.Y.)

  5. Dynamic Behavior of Helical Structure in Ferroelectric Liquid Crystals

    Science.gov (United States)

    Katayama, Takashi; Uehara, Hiroyuki; Furue, Hirokazu; Hatano, Jun

    2004-09-01

    Ferroelectric liquid crystals (FLCs) take a helical structure which can be unwound by the application of an electric field. Although the static orientational process of FLC molecules is well known, the dynamic modification process of the helical structure is not clearly understood. We formulated equations for simulating the dynamic response in terms of the elastic free-energy density based on the continuum theory, and subsequently was solved the dynamic equations numerically. Furthermore, the conoscopic image was simulated by a 4× 4 matrix method. We investigated the effect of spontaneous polarization and dielectric anisotropy on the dynamic behavior of the helical structure in FLC.

  6. A CAREM type fuel element dynamic analysis

    International Nuclear Information System (INIS)

    Magoia, J.E.

    1990-01-01

    A first analysis on the dynamic behaviour of a fuel element designed for the CAREM nuclear reactor (Central Argentina de Elementos Modulares) was performed. The model used to represent this dynamic behaviour was satisfactorily evaluated. Using primary estimations for some of its numerical parameters, a first approximation to its natural vibrational modes was obtained. Results obtained from fuel elements frequently used in nuclear power plants of the PWR (Pressurized Water Reactors) type, are compared with values resulting from similar analysis. (Author) [es

  7. Dynamics of fine structure in the solar chromosphere

    NARCIS (Netherlands)

    Wijn, A.G. de

    2006-01-01

    This thesis is concerned with the dynamics of fine structure of the solar chromosphere and transition region, in both quiet sun and active regions. It contains six chapters of observational studies. It presents a study on the spatial structure and temporal dynamics of reversed granulation; a study

  8. Structural signatures of dynamic heterogeneities in monolayers of colloidal ellipsoids

    NARCIS (Netherlands)

    Zheng, Z.Y.; Ni, R.; Wang, F.; Dijkstra, M.; Wang, Y.R.; Han, Y.L.

    2014-01-01

    When a liquid is supercooled towards the glass transition, its dynamics drastically slows down, whereas its static structure remains relatively unchanged. Finding a structural signature of the dynamic slowing down is a major challenge, yet it is often too subtle to be uncovered. Here we discover the

  9. Visualizing Structure and Dynamics of Disaccharide Simulations

    Energy Technology Data Exchange (ETDEWEB)

    Matthews, J. F.; Beckham, G. T.; Himmel, M. E.; Crowley, M. F.

    2012-01-01

    We examine the effect of several solvent models on the conformational properties and dynamics of disaccharides such as cellobiose and lactose. Significant variation in timescale for large scale conformational transformations are observed. Molecular dynamics simulation provides enough detail to enable insight through visualization of multidimensional data sets. We present a new way to visualize conformational space for disaccharides with Ramachandran plots.

  10. Multiscale simulation of microbe structure and dynamics.

    Science.gov (United States)

    Joshi, Harshad; Singharoy, Abhishek; Sereda, Yuriy V; Cheluvaraja, Srinath C; Ortoleva, Peter J

    2011-10-01

    A multiscale mathematical and computational approach is developed that captures the hierarchical organization of a microbe. It is found that a natural perspective for understanding a microbe is in terms of a hierarchy of variables at various levels of resolution. This hierarchy starts with the N -atom description and terminates with order parameters characterizing a whole microbe. This conceptual framework is used to guide the analysis of the Liouville equation for the probability density of the positions and momenta of the N atoms constituting the microbe and its environment. Using multiscale mathematical techniques, we derive equations for the co-evolution of the order parameters and the probability density of the N-atom state. This approach yields a rigorous way to transfer information between variables on different space-time scales. It elucidates the interplay between equilibrium and far-from-equilibrium processes underlying microbial behavior. It also provides framework for using coarse-grained nanocharacterization data to guide microbial simulation. It enables a methodical search for free-energy minimizing structures, many of which are typically supported by the set of macromolecules and membranes constituting a given microbe. This suite of capabilities provides a natural framework for arriving at a fundamental understanding of microbial behavior, the analysis of nanocharacterization data, and the computer-aided design of nanostructures for biotechnical and medical purposes. Selected features of the methodology are demonstrated using our multiscale bionanosystem simulator DeductiveMultiscaleSimulator. Systems used to demonstrate the approach are structural transitions in the cowpea chlorotic mosaic virus, RNA of satellite tobacco mosaic virus, virus-like particles related to human papillomavirus, and iron-binding protein lactoferrin. Copyright © 2011 Elsevier Ltd. All rights reserved.

  11. Session 6: Dynamic Modeling and Systems Analysis

    Science.gov (United States)

    Csank, Jeffrey; Chapman, Jeffryes; May, Ryan

    2013-01-01

    These presentations cover some of the ongoing work in dynamic modeling and dynamic systems analysis. The first presentation discusses dynamic systems analysis and how to integrate dynamic performance information into the systems analysis. The ability to evaluate the dynamic performance of an engine design may allow tradeoffs between the dynamic performance and operability of a design resulting in a more efficient engine design. The second presentation discusses the Toolbox for Modeling and Analysis of Thermodynamic Systems (T-MATS). T-MATS is a Simulation system with a library containing the basic building blocks that can be used to create dynamic Thermodynamic Systems. Some of the key features include Turbo machinery components, such as turbines, compressors, etc., and basic control system blocks. T-MAT is written in the Matlab-Simulink environment and is open source software. The third presentation focuses on getting additional performance from the engine by allowing the limit regulators only to be active when a limit is danger of being violated. Typical aircraft engine control architecture is based on MINMAX scheme, which is designed to keep engine operating within prescribed mechanical/operational safety limits. Using a conditionally active min-max limit regulator scheme, additional performance can be gained by disabling non-relevant limit regulators

  12. Characterization of contact structures for the spread of infectious diseases in a pork supply chain in northern Germany by dynamic network analysis of yearly and monthly networks.

    Science.gov (United States)

    Büttner, K; Krieter, J; Traulsen, I

    2015-04-01

    A major risk factor in the spread of diseases between holdings is the transport of live animals. This study analysed the animal movements of the pork supply chain of a producer group in Northern Germany. The parameters in-degree and out-degree, ingoing and outgoing infection chain, betweenness and ingoing and outgoing closeness were measured using dynamic network analysis to identify holdings with central positions in the network and to characterize the overall network topology. The potential maximum epidemic size was also estimated. All parameters were calculated for three time periods: the 3-yearly network, the yearly and the monthly networks. The yearly and the monthly networks were more fragmented than the 3-yearly network. On average, one-third of the holdings were isolated in the yearly networks and almost three quarters in the monthly networks. This represented an immense reduction in the number of holdings participating in the trade of the monthly networks. The overall network topology showed right-skewed distributions for all calculated centrality parameters indicating that network resilience was high concerning the random removal of holdings. However, for a targeted removal of holdings according to their centrality, a rapid fragmentation of the trade network could be expected. Furthermore, to capture the real importance of holdings for disease transmission, indirect trade contacts (infection chain) should be considered. In contrast to the parameters regarding direct trade contacts (degree), the infection chain parameter did not underestimate the potential risk of disease transmission. This became more obvious, the longer the observed time period was. For all three time periods, the results for the estimation of the potential maximum epidemic size illustrated that the outgoing infection chain should be chosen. It considers the chronological order and the directed nature of the contacts and has no restrictions such as the strongly connected components of a

  13. Dynamical Structure of a Traditional Amazonian Social Network.

    Science.gov (United States)

    Hooper, Paul L; DeDeo, Simon; Caldwell Hooper, Ann E; Gurven, Michael; Kaplan, Hillard S

    2013-11-13

    Reciprocity is a vital feature of social networks, but relatively little is known about its temporal structure or the mechanisms underlying its persistence in real world behavior. In pursuit of these two questions, we study the stationary and dynamical signals of reciprocity in a network of manioc beer (Spanish: chicha ; Tsimane': shocdye' ) drinking events in a Tsimane' village in lowland Bolivia. At the stationary level, our analysis reveals that social exchange within the community is heterogeneously patterned according to kinship and spatial proximity. A positive relationship between the frequencies at which two families host each other, controlling for kinship and proximity, provides evidence for stationary reciprocity. Our analysis of the dynamical structure of this network presents a novel method for the study of conditional, or non-stationary, reciprocity effects. We find evidence that short-timescale reciprocity (within three days) is present among non- and distant-kin pairs; conversely, we find that levels of cooperation among close kin can be accounted for on the stationary hypothesis alone.

  14. Dynamical Structure of a Traditional Amazonian Social Network

    Directory of Open Access Journals (Sweden)

    Paul L. Hooper

    2013-11-01

    Full Text Available Reciprocity is a vital feature of social networks, but relatively little is known about its temporal structure or the mechanisms underlying its persistence in real world behavior. In pursuit of these two questions, we study the stationary and dynamical signals of reciprocity in a network of manioc beer (Spanish: chicha; Tsimane’: shocdye’ drinking events in a Tsimane’ village in lowland Bolivia. At the stationary level, our analysis reveals that social exchange within the community is heterogeneously patterned according to kinship and spatial proximity. A positive relationship between the frequencies at which two families host each other, controlling for kinship and proximity, provides evidence for stationary reciprocity. Our analysis of the dynamical structure of this network presents a novel method for the study of conditional, or non-stationary, reciprocity effects. We find evidence that short-timescale reciprocity (within three days is present among non- and distant-kin pairs; conversely, we find that levels of cooperation among close kin can be accounted for on the stationary hypothesis alone.

  15. On Cognition, Structured Sequence Processing, and Adaptive Dynamical Systems

    Science.gov (United States)

    Petersson, Karl Magnus

    2008-11-01

    Cognitive neuroscience approaches the brain as a cognitive system: a system that functionally is conceptualized in terms of information processing. We outline some aspects of this concept and consider a physical system to be an information processing device when a subclass of its physical states can be viewed as representational/cognitive and transitions between these can be conceptualized as a process operating on these states by implementing operations on the corresponding representational structures. We identify a generic and fundamental problem in cognition: sequentially organized structured processing. Structured sequence processing provides the brain, in an essential sense, with its processing logic. In an approach addressing this problem, we illustrate how to integrate levels of analysis within a framework of adaptive dynamical systems. We note that the dynamical system framework lends itself to a description of asynchronous event-driven devices, which is likely to be important in cognition because the brain appears to be an asynchronous processing system. We use the human language faculty and natural language processing as a concrete example through out.

  16. Mapping the structural and dynamical features of kinesin motor domains.

    Science.gov (United States)

    Scarabelli, Guido; Grant, Barry J

    2013-01-01

    Kinesin motor proteins drive intracellular transport by coupling ATP hydrolysis to conformational changes that mediate directed movement along microtubules. Characterizing these distinct conformations and their interconversion mechanism is essential to determining an atomic-level model of kinesin action. Here we report a comprehensive principal component analysis of 114 experimental structures along with the results of conventional and accelerated molecular dynamics simulations that together map the structural dynamics of the kinesin motor domain. All experimental structures were found to reside in one of three distinct conformational clusters (ATP-like, ADP-like and Eg5 inhibitor-bound). These groups differ in the orientation of key functional elements, most notably the microtubule binding α4-α5, loop8 subdomain and α2b-β4-β6-β7 motor domain tip. Group membership was found not to correlate with the nature of the bound nucleotide in a given structure. However, groupings were coincident with distinct neck-linker orientations. Accelerated molecular dynamics simulations of ATP, ADP and nucleotide free Eg5 indicate that all three nucleotide states could sample the major crystallographically observed conformations. Differences in the dynamic coupling of distal sites were also evident. In multiple ATP bound simulations, the neck-linker, loop8 and the α4-α5 subdomain display correlated motions that are absent in ADP bound simulations. Further dissection of these couplings provides evidence for a network of dynamic communication between the active site, microtubule-binding interface and neck-linker via loop7 and loop13. Additional simulations indicate that the mutations G325A and G326A in loop13 reduce the flexibility of these regions and disrupt their couplings. Our combined results indicate that the reported ATP and ADP-like conformations of kinesin are intrinsically accessible regardless of nucleotide state and support a model where neck-linker docking leads to

  17. Mapping the structural and dynamical features of kinesin motor domains.

    Directory of Open Access Journals (Sweden)

    Guido Scarabelli

    Full Text Available Kinesin motor proteins drive intracellular transport by coupling ATP hydrolysis to conformational changes that mediate directed movement along microtubules. Characterizing these distinct conformations and their interconversion mechanism is essential to determining an atomic-level model of kinesin action. Here we report a comprehensive principal component analysis of 114 experimental structures along with the results of conventional and accelerated molecular dynamics simulations that together map the structural dynamics of the kinesin motor domain. All experimental structures were found to reside in one of three distinct conformational clusters (ATP-like, ADP-like and Eg5 inhibitor-bound. These groups differ in the orientation of key functional elements, most notably the microtubule binding α4-α5, loop8 subdomain and α2b-β4-β6-β7 motor domain tip. Group membership was found not to correlate with the nature of the bound nucleotide in a given structure. However, groupings were coincident with distinct neck-linker orientations. Accelerated molecular dynamics simulations of ATP, ADP and nucleotide free Eg5 indicate that all three nucleotide states could sample the major crystallographically observed conformations. Differences in the dynamic coupling of distal sites were also evident. In multiple ATP bound simulations, the neck-linker, loop8 and the α4-α5 subdomain display correlated motions that are absent in ADP bound simulations. Further dissection of these couplings provides evidence for a network of dynamic communication between the active site, microtubule-binding interface and neck-linker via loop7 and loop13. Additional simulations indicate that the mutations G325A and G326A in loop13 reduce the flexibility of these regions and disrupt their couplings. Our combined results indicate that the reported ATP and ADP-like conformations of kinesin are intrinsically accessible regardless of nucleotide state and support a model where neck

  18. Proton structure functions in the dipole picture of BFKL dynamics

    International Nuclear Information System (INIS)

    Navelet, H.; Wallon, S.

    1996-06-01

    The F 2 , F G , R=F L /F T proton structure functions are derived in the QCD dipole picture. Assuming k T and renormalization-group factorization, we relate deep-inelastic proton scattering to deep-inelastic onium scattering. We get a three-parameter fit of the 1994 H1 data in the low-x, moderate Q 2 range. The ratios F G /F 2 and R are predicted without further adjustment. The dipole picture of BFKL dynamics is shown to provide a relevant model for quantitatively describing the proton structure functions at HERA. The predictions for F 2 and F G are compatible with next-to-leading DGLAP analysis, while R is expected to be significantly lower at very small x. (orig.)

  19. PGA and structural dynamics input motion at a given site

    Science.gov (United States)

    Casciati, Fabio; Casciati, Sara; Marcellini, Alberto

    2003-06-01

    The computation of the representative ground motions, to be used as input for the dynamic analyses of a structure at a particular site, can be approached by several methods. The choice of the approach depends on two factors : the data available and the type of problem to be solved. This paper reports the experience of the authors in approaching a specific case study: the Southern Memnon Colossus, located in Luxor, Egypt. The results are of interest when the hazard analysis estimation in developing countries and the safeguard of cultural heritage are concerned. Monuments have to be treated as important structures, due to their historical and economical value. Hence, standard procedures of probabilistic seismic hazard analysis for the seismic classification of common buildings have to be disregarded. On the other hand, the consequences of the collapse of a monument are not comparable to those related to structures such as nuclear power plants and large dams, for which the deterministic seismic hazard analysis provides a straightforward framework for evaluation of the worst case ground motions. An “intermediate” approach, which requires a lower amount of input data with respect to the deterministic one, is adopted. Its stochastic component can capture significant characteristics of earthquakes, primarily the frequency contents which depend on the magnitude (often referred to as the earthquake scaling law).

  20. Physiological enhancement of factors in factor analysis of dynamic studies

    International Nuclear Information System (INIS)

    Samal, M.; Surova, H.; Marikova, E.; Michalova, K.; Karny, M.; Dienstbier, Z.

    1986-01-01

    Factor analysis of dynamic radionuclide studies provides their decomposition into the images and time-activity curves corresponding to the underlying dynamic structures. The method is based on the analysis of study variance and on the subsequent differential imaging of its principal components into a simplified factor space. By changing the amount and the composition of the variance processed in the analysis it is possible to enhance the factors that are important for diagnosis while the less important factors can be suppressed. In our report, a short theoretical review of the problem is given and illustrated by the analysis of dynamic cholescintigraphy. It is shown that a suitable choice of region and/or the temporal interval of interest enables the differential evaluation of such intrahepatic compartments, which could not be observed without enhancement. (orig.)

  1. Describing the indescribable: the stationary structures of transient Markovian dynamics

    Science.gov (United States)

    Eliazar, Iddo

    2012-07-01

    Markovian dynamics are the most elemental and prevalent form of stochastic dynamics in science and engineering. The statistical evolution of given Markovian dynamics is governed by its master equation, and the integrability of the master equation’s positive-valued stationary solutions determines the dynamics’ statistical behavior: integrability implies that the dynamics converge to steady state, and non-integrability implies that the dynamics are transient. This letter establishes that all the positive-valued stationary solutions of the master equation represent Poissonian steady states. Poissonian steady states generalize the notion of ‘regular’ steady states, and quantify the stationary structures of general Markovian dynamics. In particular, we unveil and quantify the stationary structures of transient Markovian dynamics.

  2. The Dynamic Similitude Design Method of Thin Walled Structures and Experimental Validation

    Directory of Open Access Journals (Sweden)

    Zhong Luo

    2016-01-01

    Full Text Available For the applicability of dynamic similitude models of thin walled structures, such as engine blades, turbine discs, and cylindrical shells, the dynamic similitude design of typical thin walled structures is investigated. The governing equation of typical thin walled structures is firstly unified, which guides to establishing dynamic scaling laws of typical thin walled structures. Based on the governing equation, geometrically complete scaling law of the typical thin walled structure is derived. In order to determine accurate distorted scaling laws of typical thin walled structures, three principles are proposed and theoretically proved by combining the sensitivity analysis and governing equation. Taking the thin walled annular plate as an example, geometrically complete and distorted scaling laws can be obtained based on the principles of determining dynamic scaling laws. Furthermore, the previous five orders’ accurate distorted scaling laws of thin walled annular plates are presented and numerically validated. Finally, the effectiveness of the similitude design method is validated by experimental annular plates.

  3. Dynamic membrane structure induces temporal pattern formation.

    Science.gov (United States)

    Lippoldt, J; Händel, C; Dietrich, U; Käs, J A

    2014-10-01

    The understanding of temporal pattern formation in biological systems is essential for insights into regulatory processes of cells. Concerning this problem, the present work introduces a model to explain the attachment/detachment cycle of MARCKS and PKC at the cell membrane, which is crucial for signal transduction processes. Our model is novel with regard to its driving mechanism: Structural changes within the membrane fuel an activator-inhibitor based global density oscillation of membrane related proteins. Based on simulated results of our model, phase diagrams were generated to illustrate the interplay of MARCKS and PKC. They predict the oscillatory behavior in the form of the number of peaks, the periodic time, and the damping constant depending on the amounts of MARCKS and PKC, respectively. The investigation of the phase space also revealed an unexpected intermediate state prior to the oscillations for high amounts of MARCKS in the system. The validation of the obtained results was carried out by stability analysis, which also accounts for further enhanced understanding of the studied system. It was shown, that the occurrence of the oscillating behavior is independent of the diffusion and the consumption of the reactants. The diffusion terms in the used reaction-diffusion equations only act as modulating terms and are not required for the oscillation. The hypothesis of our work suggests a new mechanism of temporal pattern formation in biological systems. This mechanism includes a classical activator-inhibitor system, but is based on the modifications of the membrane structure, rather than a reaction-diffusion system. Copyright © 2014 Elsevier B.V. All rights reserved.

  4. Laser fields in dynamically ionized plasma structures for coherent acceleration

    CERN Document Server

    Luu-Thanh, Ph.; Pukhov, A.; Kostyukov, I.

    2015-01-01

    With the emergence of the CAN (Coherent Amplification Network) laser technology, a new scheme for direct particle acceleration in periodic plasma structures has been proposed. By using our full electromagnetic relativistic particle-in-cell (PIC) simulation code equipped with ionisation module, we simulate the laser fields dynamics in the periodic structures of different materials. We study how the dynamic ionization influences the field structure.

  5. A framework of DYNAMIC data structures for string processing

    DEFF Research Database (Denmark)

    Prezza, Nicola

    2017-01-01

    In this paper we present DYNAMIC, an open-source C++ library implementing dynamic compressed data structures for string manipulation. Our framework includes useful tools such as searchable partial sums, succinct/gap-encoded bitvectors, and entropy/run-length compressed strings and FM indexes. We...... implemented using DYNAMIC with those of stateof-the-art tools performing the same task. Our experiments show that algorithms making use of dynamic compressed data structures can be up to three orders of magnitude more space-efficient (albeit slower) than classical ones performing the same tasks....

  6. Passivhaus: indoor comfort and energy dynamic analysis.

    Science.gov (United States)

    Guida, Antonella; Pagliuca, Antonello; Cardinale, Nicola; Rospi, Gianluca

    2013-04-01

    The research aims to verify the energy performance as well as the indoor comfort of an energy class A+ building, built so that the sum of the heat passive contributions of solar radiation, transmitted through the windows, and the heat generated inside the building, are adeguate to compensate for the envelope loss during the cold season. The building, located in Emilia Romagna (Italy), was built using a wooden structure, an envelope realized using a pinewood sandwich panels (transmittance U = 0.250 W/m2K) and, inside, a wool flax insulation layer and thermal window frame with low-emissivity glass (U = 0524 W/m2K). The building design and construction process has followed the guidelines set by "CasaClima". The building has been modeled in the code of dynamic calculation "Energy Plus" by the Design Builder application and divided it into homogenous thermal zones, characterized by winter indoor temperature set at 20 ° (+ / - 1 °) and summer indoor temperature set at 26 ° (+ / - 1 °). It has modeled: the envelope, as described above, the "free" heat contributions, the air conditioning system, the Mechanical Ventilation system as well as home automation solutions. The air conditioning system is an heat pump, able to guarantee an optimization of energy consumption (in fact, it uses the "free" heat offered by the external environment for conditioning indoor environment). As regards the air recirculation system, it has been used a mechanical ventilation system with internal heat cross-flow exchanger, with an efficiency equal to 50%. The domotic solutions, instead, regard a system for the control of windows external screening using reeds, adjustable as a function of incident solar radiation and a lighting management system adjusted automatically using a dimmer. A so realized building meets the requirement imposed from Italian standard UNI/TS 11300 1, UNI/TS 11300 2 and UNI/TS 11300 3. The analysis was performed according to two different configurations: in "spontaneous

  7. Sensitivity Analysis of Fire Dynamics Simulation

    DEFF Research Database (Denmark)

    Brohus, Henrik; Nielsen, Peter V.; Petersen, Arnkell J.

    2007-01-01

    equations require solution of the issues of combustion and gas radiation to mention a few. This paper performs a sensitivity analysis of a fire dynamics simulation on a benchmark case where measurement results are available for comparison. The analysis is performed using the method of Elementary Effects...

  8. Example of dynamic analysis of orthotropic steel bridge plate

    Directory of Open Access Journals (Sweden)

    Cvijić Radomir

    2015-01-01

    Full Text Available This paper presents brief dynamic analysis of one typical steel bridge orthotropic plate. Geometry and load data are adopted according to recommendations from the literature. Calculation is preformed using the Finite element method where the commercial software package Abaqus is used. Dynamic load due to vehicle crossing is modeled via six weighted rigid plates with dimensions equal to the contact surface between the wheel and the plate. Obtained results suggest that the main impact on the structural response comes from the speed of the vehicle. Influence of the crossing of the second vehicle was negligible in presented analysis.

  9. Dynamics and vibrations progress in nonlinear analysis

    CERN Document Server

    Kachapi, Seyed Habibollah Hashemi

    2014-01-01

    Dynamical and vibratory systems are basically an application of mathematics and applied sciences to the solution of real world problems. Before being able to solve real world problems, it is necessary to carefully study dynamical and vibratory systems and solve all available problems in case of linear and nonlinear equations using analytical and numerical methods. It is of great importance to study nonlinearity in dynamics and vibration; because almost all applied processes act nonlinearly, and on the other hand, nonlinear analysis of complex systems is one of the most important and complicated tasks, especially in engineering and applied sciences problems. There are probably a handful of books on nonlinear dynamics and vibrations analysis. Some of these books are written at a fundamental level that may not meet ambitious engineering program requirements. Others are specialized in certain fields of oscillatory systems, including modeling and simulations. In this book, we attempt to strike a balance between th...

  10. Nonlinear structural mechanics theory, dynamical phenomena and modeling

    CERN Document Server

    Lacarbonara, Walter

    2013-01-01

    Nonlinear Structural Mechanics: Theory, Dynamical Phenomena and Modeling offers a concise, coherent presentation of the theoretical framework of nonlinear structural mechanics, computational methods, applications, parametric investigations of nonlinear phenomena and their mechanical interpretation towards design. The theoretical and computational tools that enable the formulation, solution, and interpretation of nonlinear structures are presented in a systematic fashion so as to gradually attain an increasing level of complexity of structural behaviors, under the prevailing assumptions on the geometry of deformation, the constitutive aspects and the loading scenarios. Readers will find a treatment of the foundations of nonlinear structural mechanics towards advanced reduced models, unified with modern computational tools in the framework of the prominent nonlinear structural dynamic phenomena while tackling both the mathematical and applied sciences. Nonlinear Structural Mechanics: Theory, Dynamical Phenomena...

  11. Fundamental structures of dynamic social networks

    DEFF Research Database (Denmark)

    Sekara, Vedran; Stopczynski, Arkadiusz; Jørgensen, Sune Lehmann

    2016-01-01

    Social systems are in a constant state of flux, with dynamics spanning from minute-by-minute changes to patterns present on the timescale of years. Accurate models of social dynamics are important for understanding the spreading of influence or diseases, formation of friendships...... and their interactions in the network of real-world person-to-person proximity measured via Bluetooth, as well as their telecommunication networks, online social media contacts, geolocation, and demographic data. These high-resolution data allow us to observe social groups directly, rendering community detection......, and the productivity of teams. Although there has been much progress on understanding complex networks over the past decade, little is known about the regularities governing the microdynamics of social networks. Here, we explore the dynamic social network of a densely-connected population of ∼1,000 individuals...

  12. THE DYNAMICS OF THE MATRICS STRUCTURE

    Directory of Open Access Journals (Sweden)

    Dumitru CONSTANTINESCU

    2007-01-01

    Full Text Available The relationships organization-suppliers-customers have recently known major changes in the structure of services and have made the organization develop its managerial and professional competencies in order to do projects. The qualified organization is the most trust-worthy in the process of doing a project. The participation of an organization in doing projects depends on a multitude of factors. Out of these factors, the structural organization comes forth, as it represents the variable with the most important impact on a project’s quality, costs and lead time. From the organizational point of view, the matrix structure is frequently chosen for projects. The matrix structure generally coexists with the line structure. The two structures are contrastive. The line structure is based on the unity of command principle and is not open to cooperation and dialogue. The matrix structure encourages cooperation and communication, favours conflict, which is considered here a healthy and essential process. The matrix structure and the line structure claim their right to initiative. Conflict and the multidimensional integration of multiple hierarchies can be negotiated through the concept charisma – mediation, sustained by the matrix structure.

  13. From Dynamic Condition Response Structures to Büchi Automata

    DEFF Research Database (Denmark)

    Mukkamala, Raghava Rao; Hildebrandt, Thomas

    2010-01-01

    Recently we have presented distributed dynamic condition response structures (DCR structures) as a declarative process model conservatively generalizing labelled event structures to allow for finite specifications of repeated, possibly infinite behavior. The key ideas are to split the causality r...... and show how to characterise the execution of DCR structures and the acceptance condition for infinite runs by giving a map to Bu ̈chi-automata. This is the first step towards automatic verification of processes specified as DCR structures....

  14. Prime implicants in dynamic reliability analysis

    International Nuclear Information System (INIS)

    Tyrväinen, Tero

    2016-01-01

    This paper develops an improved definition of a prime implicant for the needs of dynamic reliability analysis. Reliability analyses often aim to identify minimal cut sets or prime implicants, which are minimal conditions that cause an undesired top event, such as a system's failure. Dynamic reliability analysis methods take the time-dependent behaviour of a system into account. This means that the state of a component can change in the analysed time frame and prime implicants can include the failure of a component at different time points. There can also be dynamic constraints on a component's behaviour. For example, a component can be non-repairable in the given time frame. If a non-repairable component needs to be failed at a certain time point to cause the top event, we consider that the condition that it is failed at the latest possible time point is minimal, and the condition in which it fails earlier non-minimal. The traditional definition of a prime implicant does not account for this type of time-related minimality. In this paper, a new definition is introduced and illustrated using a dynamic flowgraph methodology model. - Highlights: • A new definition of a prime implicant is developed for dynamic reliability analysis. • The new definition takes time-related minimality into account. • The new definition is needed in dynamic flowgraph methodology. • Results can be represented by a smaller number of prime implicants.

  15. Dynamic Capital Structure: Dynamics, Determinants and Speed of Adjustment

    NARCIS (Netherlands)

    Tamirat, A.S.; Trujillo Barrera, A.A.; Pennings, J.M.E.

    2017-01-01

    The corporate finance literature has focused on explaining the determinants of firms target capital structure and speed of adjustment using the well-established theories such as pecking order, signaling and trade-off theories. However, less attention has been paid to understanding the financing

  16. PARAMETRIC ANALYSIS OF THE DYNAMIC PROPERTIES OF ...

    African Journals Online (AJOL)

    Department of Civil Engineering,. Addis Ababa University. ABSTRACT. The behavioral responses of sectorial shells as related to the number of modes ... variety 0f dynamic loads, such as seismic, blast and wind loads among others, is a phenomenon of interest in view of the relatively large sizes of such structures and the ...

  17. Friends and foes : The dynamics of dual social structures

    NARCIS (Netherlands)

    Sytch, M.; Tatarynowicz, A.

    2014-01-01

    This paper investigates the evolutionary dynamics of a dual social structure encompassing collaboration and conflict among corporate actors. We apply and advance structural balance theory to examine the formation of balanced and unbalanced dyadic and triadic structures, and to explore how these

  18. Ultrafast Structural Dynamics in Combustion Relevant Model Systems

    Energy Technology Data Exchange (ETDEWEB)

    Weber, Peter M. [Brown University

    2014-03-31

    The research project explored the time resolved structural dynamics of important model reaction system using an array of novel methods that were developed specifically for this purpose. They include time resolved electron diffraction, time resolved relativistic electron diffraction, and time resolved Rydberg fingerprint spectroscopy. Toward the end of the funding period, we also developed time-resolved x-ray diffraction, which uses ultrafast x-ray pulses at LCLS. Those experiments are just now blossoming, as the funding period expired. In the following, the time resolved Rydberg Fingerprint Spectroscopy is discussed in some detail, as it has been a very productive method. The binding energy of an electron in a Rydberg state, that is, the energy difference between the Rydberg level and the ground state of the molecular ion, has been found to be a uniquely powerful tool to characterize the molecular structure. To rationalize the structure sensitivity we invoke a picture from electron diffraction: when it passes the molecular ion core, the Rydberg electron experiences a phase shift compared to an electron in a hydrogen atom. This phase shift requires an adjustment of the binding energy of the electron, which is measurable. As in electron diffraction, the phase shift depends on the molecular, geometrical structure, so that a measurement of the electron binding energy can be interpreted as a measurement of the molecule’s structure. Building on this insight, we have developed a structurally sensitive spectroscopy: the molecule is first elevated to the Rydberg state, and the binding energy is then measured using photoelectron spectroscopy. The molecule’s structure is read out as the binding energy spectrum. Since the photoionization can be done with ultrafast laser pulses, the technique is inherently capable of a time resolution in the femtosecond regime. For the purpose of identifying the structures of molecules during chemical reactions, and for the analysis of

  19. Structural dynamic modification using additive damping

    Indian Academy of Sciences (India)

    A viscoelastic material like polyvinyl chloride (PVC) has the characteristics of both elastic and viscous elements. The dynamic properties of such materials are represented under harmonic vibration conditions by complex moduli. This is due to the phase difference between stress ' and strain or 'a И E1 З iE2 for direct strain.

  20. Molecular dynamics modeling of structural battery components

    NARCIS (Netherlands)

    Verners, O.; Van Duin, A.C.T.; Wagemaker, M.; Simone, A.

    2015-01-01

    A crosslinked polymer based solid electrolyte prototype material –poly(propylene glycol) diacrylate– is studied using the reactive molecular dynamics force field ReaxFF. The focus of the study is the evaluation of the effects of equilibration and added plasticizer (ethylene carbonate) or anion

  1. Hierarchical Structured Model for Nonlinear Dynamical Processes ...

    African Journals Online (AJOL)

    The mathematical representation of the process, in this context, is by a set of linear stochastic differential equations (SDE) with unique solutions. The problem of realization is that of constructing the dynamical system by looking at the problem of scientific model building. In model building, one must be able to calculate the ...

  2. Segmenting Dynamic Human Action via Statistical Structure

    Science.gov (United States)

    Baldwin, Dare; Andersson, Annika; Saffran, Jenny; Meyer, Meredith

    2008-01-01

    Human social, cognitive, and linguistic functioning depends on skills for rapidly processing action. Identifying distinct acts within the dynamic motion flow is one basic component of action processing; for example, skill at segmenting action is foundational to action categorization, verb learning, and comprehension of novel action sequences. Yet…

  3. Develop Infrared Structural Biology for Probing Structural Dynamics of Protein Functions

    Science.gov (United States)

    Xie, Aihua; Kang, Zhouyang; Causey, Oliver; Liu, Charle

    2015-03-01

    Protein functions are carried out through a series of structural transitions. Lack of knowledge on functionally important structural motions of proteins impedes our understanding of protein functions. Infrared structural biology is an emerging technology with powerful applications for protein structural dynamics. One key element of infrared structural biology is the development of vibrational structural marker (VSM) database library that translates infrared spectroscopic signals into specific structural information. We report the development of VSM for probing the type, geometry and strength of hydrogen bonding interactions of buried COO- side chains of Asp and Glu in proteins. Quantum theory based first principle computational studies combined with bioinformatic hydrogen bond analysis are employed in this study. We will discuss the applications of VSM in mechanistic studies of protein functions. Infrared structural biology is expected to emerge as a powerful technique for elucidating the functional mechanism of a broad range of proteins, including water soluble and membrane proteins. This work is supported by OCAST HR10-078 and NSF DBI1338097.

  4. Full scale dynamic testing of Kozloduy NPP unit 5 structures

    International Nuclear Information System (INIS)

    Da Rin, E.M.

    1999-01-01

    As described in this report, the Kozloduy NPP western site has been subjected to low level earthquake-like ground shaking - through appropriately devised underground explosions - and the resulting dynamic response of the NPP reactor Unit 5 important structures appropriately measured and digitally recorded. In-situ free-field response was measured concurrently more than 100 m aside the main structures of interest. The collected experimental data provide reference information on the actual dynamic characteristics of the Kozloduy NPPs main structures, as well as give some useful indications on the dynamic soil-structure interaction effects for the case of low level excitation. Performing the present full-scale dynamic structural testing activities took advantage of the experience gained by ISMES during similar tests, lately performed in Italy and abroad (in particular, at the Paks NPP in 1994). The IAEA promoted dynamic testing of the Kozloduy NPP Unit 5 by means of pertinently designed buried explosion-induced ground motions which has provided a large amount of data on the dynamic structural response of its major structures. In the present report, the conducted investigation is described and the acquired digital data presented. A series of preliminary analyses were undertaken for examining in detail the ground excitation levels that were produced by these weak earthquake simulation experiments, as well as for inferring some structural characteristics and behaviour information from the collected data. These analyses ascertained the high quality of the collected digital data. Presumably due to soil-structure dynamic interaction effects, reduced excitation levels were observed at the reactor building foundation raft level with respect to the concurrent free-field ground motions. measured at a 140 m distance from the reactor building centre. Further more detailed and systematic analyses are worthwhile to be performed for extracting more complete information about the

  5. Invariant molecular-dynamics approach to structural phase transitions

    International Nuclear Information System (INIS)

    Wentzcovitch, R.M.

    1991-01-01

    Two fictitious Lagrangians to be used in molecular-dynamics simulations with variable cell shape and suitable to study problems like structural phase transitions are introduced. Because they are invariant with respect to the choice of the simulation cell edges and eliminate symmetry breaking associated with the fictitious part of the dynamics, they improve the physical content of numerical simulations that up to now have been done by using Parrinello-Rahman dynamics

  6. Dynamical analysis of tachyonic chameleon

    Science.gov (United States)

    Banijamali, Ali; Solbi, Milad

    2017-08-01

    In the present paper we investigate tachyonic chameleon scalar field and present the phase space analysis for four different combinations of the tachyonic potential V(φ ) and the coupling function f(φ ) of the chameleon field with matter. We find some stable solution in which accelerated expansion of the universe is satisfied. In one case where both f(φ ) and V(φ ) are exponential a scaling attractor was found that can give rise to the late-time acceleration of the universe and alleviate the coincidence problem.

  7. Dynamic Event Tree Analysis Through RAVEN

    Energy Technology Data Exchange (ETDEWEB)

    A. Alfonsi; C. Rabiti; D. Mandelli; J. Cogliati; R. A. Kinoshita; A. Naviglio

    2013-09-01

    Conventional Event-Tree (ET) based methodologies are extensively used as tools to perform reliability and safety assessment of complex and critical engineering systems. One of the disadvantages of these methods is that timing/sequencing of events and system dynamics is not explicitly accounted for in the analysis. In order to overcome these limitations several techniques, also know as Dynamic Probabilistic Risk Assessment (D-PRA), have been developed. Monte-Carlo (MC) and Dynamic Event Tree (DET) are two of the most widely used D-PRA methodologies to perform safety assessment of Nuclear Power Plants (NPP). In the past two years, the Idaho National Laboratory (INL) has developed its own tool to perform Dynamic PRA: RAVEN (Reactor Analysis and Virtual control ENvironment). RAVEN has been designed in a high modular and pluggable way in order to enable easy integration of different programming languages (i.e., C++, Python) and coupling with other application including the ones based on the MOOSE framework, developed by INL as well. RAVEN performs two main tasks: 1) control logic driver for the new Thermo-Hydraulic code RELAP-7 and 2) post-processing tool. In the first task, RAVEN acts as a deterministic controller in which the set of control logic laws (user defined) monitors the RELAP-7 simulation and controls the activation of specific systems. Moreover, RAVEN also models stochastic events, such as components failures, and performs uncertainty quantification. Such stochastic modeling is employed by using both MC and DET algorithms. In the second task, RAVEN processes the large amount of data generated by RELAP-7 using data-mining based algorithms. This paper focuses on the first task and shows how it is possible to perform the analysis of dynamic stochastic systems using the newly developed RAVEN DET capability. As an example, the Dynamic PRA analysis, using Dynamic Event Tree, of a simplified pressurized water reactor for a Station Black-Out scenario is presented.

  8. Structural Analysis of Plate Based Tensegrity Structures

    DEFF Research Database (Denmark)

    Hald, Frederik; Kirkegaard, Poul Henning; Damkilde, Lars

    2013-01-01

    Plate tensegrity structures combine tension cables with a cross laminated timber plate and can then form e.g. a roof structure. The topology of plate tensegrity structures is investigated through a parametric investigation. Plate tensegrity structures are investigated, and a method...

  9. Dynamics of generalized Gaussian polymeric structures in random layered flows.

    Science.gov (United States)

    Katyal, Divya; Kant, Rama

    2015-04-01

    We develop a formalism for the dynamics of a flexible branched polymer with arbitrary topology in the presence of random flows. This is achieved by employing the generalized Gaussian structure (GGS) approach and the Matheron-de Marsily model for the random layered flow. The expression for the average square displacement (ASD) of the center of mass of the GGS is obtained in such flow. The averaging is done over both the thermal noise and the external random flow. Although the formalism is valid for branched polymers with various complex topologies, we mainly focus here on the dynamics of the flexible star and dendrimer. We analyze the effect of the topology (the number and length of branches for stars and the number of generations for dendrimers) on the dynamics under the influence of external flow, which is characterized by their root-mean-square velocity, persistence flow length, and flow exponent α. Our analysis shows two anomalous power-law regimes, viz., subdiffusive (intermediate-time polymer stretching and flow-induced diffusion) and superdiffusive (long-time flow-induced diffusion). The influence of the topology of the GGS is unraveled in the intermediate-time regime, while the long-time regime is only weakly dependent on the topology of the polymer. With the decrease in the value of α, the magnitude of the ASD decreases, while the temporal exponent of the ASD increases in both the time regimes. Also there is an increase in both the magnitude of the ASD and the crossover time (from the subdiffusive to the superdiffusive regime) with an increase in the total mass of the polymeric structure.

  10. STRUCTURAL ANALYSIS OF SUPERCONDUCTING ACCELERATOR CAVITIES

    International Nuclear Information System (INIS)

    Schrage, D.

    2000-01-01

    The static and dynamic structural behavior of superconducting cavities for various projects was determined by finite element structural analysis. The β = 0.61 cavity shape for the Neutron Science Project was studied in detail and found to meet all design requirements if fabricated from five millimeter thick material with a single annular stiffener. This 600 MHz cavity will have a Lorentz coefficient of minus1.8 Hz/(Mv/meter) 2 and a lowest structural resonance of more than 100 Hz. Cavities at β = 0.48, 0.61, and 0.77 were analyzed for a Neutron Science Project concept which would incorporate 7-cell cavities. The medium and high beta cavities were found to meet all criteria but it was not possible to generate a β = 0.48 cavity with a Lorentz coefficient of less than minus3 Hz/(Mv/meter) 2

  11. Dynamic analysis of C/C composite finger seal

    Directory of Open Access Journals (Sweden)

    Chen Guoding

    2014-06-01

    Full Text Available A seal device as an important component of aeroengines has decisive influence on performance, reliability, and working life of aeroengines. With the development of aeroengines, demands on the performance characteristics of seal devices are made strictly. Finger seal as a novel kind of sealing device, recently attracts more and more attentions in academic circles and engineering fields at home and abroad. Research on finger seals has been extensively developed, especially on leakage and wear performances under dynamic conditions. However, it is a pity that the work on finger seals has been limited with a single approach that is improving the performance by structural optimization; in addition, the technology of dynamic analysis on finger seals is weak. Aiming at the problems mentioned above, a distributed mass equivalent dynamic model of finger seals considering the coupling effect of overlaid laminates is established in the present paper, the dynamic performance of 2.5 dimension C/C composite finger seal is analyzed with the model, and then the effects of fiber bundle density and fiber bundle preparation direction on finger seal’s dynamic performance are discussed, as well as compared with those of Co-based alloy finger seal. The current work is about dynamic analysis of finger seals and application of C/C composite in this paper may have much academic significance and many engineering values for improving research level of finger seal dynamics and exploring feasibility of C/C composite being used for finger seals.

  12. Quantifying and modeling soil structure dynamics

    Science.gov (United States)

    Characterization of soil structure has been a topic of scientific discussions ever since soil structure has been recognized as an important factor affecting soil physical, mechanical, chemical, and biological processes. Beyond semi-quantitative soil morphology classes, it is a challenge to describe ...

  13. Structure and dynamics in small biomolecular systems

    NARCIS (Netherlands)

    Kalkman, Ivo Michel

    2009-01-01

    The exact structures of large, biologically interesting molecules such as proteins are very important for the functions these molecules fulfill. In order to increase our understanding of the relationship between structure and function and to enhance the predictive power of theoretical models the

  14. Crystal structure and pair potentials: A molecular-dynamics study

    Energy Technology Data Exchange (ETDEWEB)

    Parrinello, M.; Rahman, A.

    1980-10-06

    With use of a Lagrangian which allows for the variation of the shape and size of the periodically repeating molecular-dynamics cell, it is shown that different pair potentials lead to different crystal structures.

  15. Canonical and symplectic analysis for three dimensional gravity without dynamics

    International Nuclear Information System (INIS)

    Escalante, Alberto; Osmart Ochoa-Gutiérrez, H.

    2017-01-01

    In this paper a detailed Hamiltonian analysis of three-dimensional gravity without dynamics proposed by V. Hussain is performed. We report the complete structure of the constraints and the Dirac brackets are explicitly computed. In addition, the Faddeev–Jackiw symplectic approach is developed; we report the complete set of Faddeev–Jackiw constraints and the generalized brackets, then we show that the Dirac and the generalized Faddeev–Jackiw brackets coincide to each other. Finally, the similarities and advantages between Faddeev–Jackiw and Dirac’s formalism are briefly discussed. - Highlights: • We report the symplectic analysis for three dimensional gravity without dynamics. • We report the Faddeev–Jackiw constraints. • A pure Dirac’s analysis is performed. • The complete structure of Dirac’s constraints is reported. • We show that symplectic and Dirac’s brackets coincide to each other.

  16. Canonical and symplectic analysis for three dimensional gravity without dynamics

    Energy Technology Data Exchange (ETDEWEB)

    Escalante, Alberto, E-mail: aescalan@ifuap.buap.mx [Instituto de Física, Benemérita Universidad Autónoma de Puebla, Apartado Postal J-48 72570, Puebla, Pue. (Mexico); Osmart Ochoa-Gutiérrez, H. [Facultad de Ciencias Físico Matemáticas, Benemérita Universidad Autónoma de Puebla, Apartado postal 1152, 72001 Puebla, Pue. (Mexico)

    2017-03-15

    In this paper a detailed Hamiltonian analysis of three-dimensional gravity without dynamics proposed by V. Hussain is performed. We report the complete structure of the constraints and the Dirac brackets are explicitly computed. In addition, the Faddeev–Jackiw symplectic approach is developed; we report the complete set of Faddeev–Jackiw constraints and the generalized brackets, then we show that the Dirac and the generalized Faddeev–Jackiw brackets coincide to each other. Finally, the similarities and advantages between Faddeev–Jackiw and Dirac’s formalism are briefly discussed. - Highlights: • We report the symplectic analysis for three dimensional gravity without dynamics. • We report the Faddeev–Jackiw constraints. • A pure Dirac’s analysis is performed. • The complete structure of Dirac’s constraints is reported. • We show that symplectic and Dirac’s brackets coincide to each other.

  17. Dynamic relaxation method in analysis of reinforced concrete bent elements

    Directory of Open Access Journals (Sweden)

    Anna Szcześniak

    2015-12-01

    Full Text Available The paper presents a method for the analysis of nonlinear behaviour of reinforced concrete bent elements subjected to short-term static load. The considerations in the range of modelling of deformation processes of reinforced concrete element were carried out. The method of structure effort analysis was developed using the finite difference method. The Dynamic Relaxation Method, which — after introduction of critical damping — allows for description of the static behaviour of a structural element, was used to solve the system of nonlinear equilibrium equations. In order to increase the method effectiveness in the range of the post-critical analysis, the Arc Length Parameter on the equilibrium path was introduced into the computational procedure.[b]Keywords[/b]: reinforced concrete elements, physical nonlinearity, geometrical nonlinearity, dynamic relaxation method, arc-length method

  18. Watching Atoms Work: Nanocluster Structure and Dynamics.

    Science.gov (United States)

    Pennycook, Stephen J; Zhou, Wu; Pantelides, Sokrates T

    2015-10-27

    In the space of little more than a decade, the resolution of the electron microscope has improved to provide clear views of the atomic world. Not only can atomic arrangements be imaged, but with a little gentle provocation from the electron beam, atoms can be energized and their dynamics can also be revealed. In this issue of ACS Nano, Chen et al. image Si atoms growing under the beam into cubic crystalline arrangements.

  19. Innovations from SMEs or Large Firms? Sector Structure and Dynamics

    OpenAIRE

    W.A. Dolfsma; G. van der Panne

    2007-01-01

    In this paper we investigate which elements in both an industry’s structure and in an industry’s dynamics affect innovativeness. We use the most appropriate measure for innovativeness –new product announcements- to find specifically that dominance of large firms consistently affect industry innovativeness negatively. Other industry structure characteristics are surprisingly consistent across different model specifications. Our findings for indicators of industry dynamics are noteworthy ...

  20. Structural Analysis of Communication Development.

    Science.gov (United States)

    Conville, Richard L.

    This paper discusses the question of the legitimacy of applying structural analysis to actual human behavior and illustrates its legitimacy by using the reasoning in an essay by Paul Ricoeur. It then asks if the principles of communication development (obliqueness, exchange, and dying) derived from Helen Keller's experience of communication…

  1. A Neural Network Model of the Structure and Dynamics of Human Personality

    Science.gov (United States)

    Read, Stephen J.; Monroe, Brian M.; Brownstein, Aaron L.; Yang, Yu; Chopra, Gurveen; Miller, Lynn C.

    2010-01-01

    We present a neural network model that aims to bridge the historical gap between dynamic and structural approaches to personality. The model integrates work on the structure of the trait lexicon, the neurobiology of personality, temperament, goal-based models of personality, and an evolutionary analysis of motives. It is organized in terms of two…

  2. Nastran nonlinear dynamic transient accident analysis for FFTF reactor component

    International Nuclear Information System (INIS)

    Lujan, R.A.; Chenault, D.M.; Go, J.C.

    1976-01-01

    A nonlinear dynamic transient analysis merging hand calculations and the NASTRAN structural analysis computer code was conducted for a Fast Flux Test Facility in-reactor test assembly during an extremely unlikely design basis accidental event which is considered a Hypothetical Core Disruptive Accident (HCDA). The finite element modeling of the problem took advantage of NASTRAN's versatility to create loads and nonlinear elements not previously found in NASTRAN's library. The structural criteria for the test assembly to withstand an HCDA stipulates that the test assembly and its spoolpiece shall remain integral with the reactor head such that missiles are not generated

  3. BERSAFE: (BERkeley Structural Analysis by Finite Elements)

    International Nuclear Information System (INIS)

    Anon.

    1991-01-01

    BERSAFE is a well-known finite element system which has been under continuous use and development for over 20 years. The BERSAFE system comprises an inter-compatible set of program modules covering static stress analysis, linear dynamics and thermal analysis. Data generation and results presentation modules are also available, along with special supporting functions including automatic crack growth through a model with adaptive meshing. The functionality of BERSAFE, is nowadays very advanced, both in engineering scope and finite element technology. It has seen many firsts, including the front solution and Virtual Crack Extension methods (VCE). More recent additions which have developed out of the Power Industry's requirements are a finite element computational fluid dynamics code, FEAT, and engineering design assessment procedures. These procedures include R6 and R5 for the assessment of the integrity of structures containing defects below and within the creep regime. To use all this software in a user-friendly manner, a new computational environment has been developed, called 'The Harness' which takes advantage of modern hardware and software philosophies. This provides the tool-kit to undertake complete problems, covering determination of fluid loads, structural analysis and failure assessment. In the following sections we describe briefly various components of the BERSAFE suite. (author)

  4. Dynamic Analysis of The Intelligent Sprayer Boom

    DEFF Research Database (Denmark)

    Wiggers, Sine Leergaard; Maagaard, Jørgen; Terp, Christian Istjord

    As part of the 3 year project “The intelligent Sprayer Boom”, financed by The Danish National Advanced Technology Foundation, the dynamics of the sprayer boom is to be analysed. In order to minimize the amount of herbicides used to kill the weeds in agriculture a new sprayer boom is being developed...... called “The intelligent sprayer boom”. For the sprayer boom the primary challenge is to hit the weeds with precision from a movable platform. Since the sprayer boom is mounted on a tractor the system will react to bumps in the field. The intelligent sprayer boom has an integrated camera technology...... system to work properly. At the University of Southern Denmark (SDU) a patent for an active damping system of the sprayer boom has been obtained. The subject of this paper is analysis of the dynamics of the Sprayer boom. The analysis is based on a Multibody Dynamics model of the sprayer boom and is made...

  5. Theoretical studies of structure and dynamics of chalcogenide glasses

    Science.gov (United States)

    Inam, Fakharul

    In this work, the structural and dynamical properties of Ge-Se and Ag-Ge-Se glasses, using first principle molecular dynamics simulations, is presented. Raman and calorimetric studies on GeXSe1- x glasses have provided evidence for the existence of the intermediate phase (IP) in chalcogenides and other glasses. Here we thoroughly discuss the ab-initio models of Ge XSe1-x glasses over a wide composition range and provide an atomistic picture of the IP. A thorough analysis of our models reveals that the IP in these glasses may arise from the competition between amorphous GeSe2 and a polymeric a-Se phases, which gives rise to the non-monotonic evolution (a topological feature of the IP) of the network parameters through the IP window. A qualitative comparison is made between the topological features extracted from the models and the experiments. A possible electronic signature of the IP in terms of the shift in the conduction edge energy in the IP range is predicted. The results agree with the shift in the white line position for the Se atoms in the K-edge X-Ray Absorption Near Edge Structure (XANES) spectra. A microscopic picture of the silver dynamics in GeSe3 :Ag glass is presented. The dynamics of Ag is explored at two temperatures: 300K and 700K. In the relaxed GeSe3 glass network, it is shown that the Ag occupies trapping centers (TC) that exist between pairs of suitably separated host sites. The charge state of the Ag in the glass network is computed and it is shown that Ag is neutral if weakly bonded and is Ag+ if in a trapping center. The dynamics of the Ag is shown to be largely effected by the neighboring host sties. At room temperature, Ag is mainly trapped at the TC with small hopping probability between neighboring TCs. At higher temperature (700 K), the Ag motion is diffusive and is proceeded via a trapping-release dynamics between supertraps or cages consisting of multiple trapping center sites in a small volume. Our work offers a first

  6. Atomic probes of surface structure and dynamics

    International Nuclear Information System (INIS)

    Heller, E.J.; Jonsson, H.

    1992-01-01

    Progress for the period Sept. 15, 1992 to Sept. 14, 1993 is discussed. Semiclassical methods that will allow much faster and more accurate three-dimensional atom--surface scattering calculations, both elastic and inelastic, are being developed. The scattering of He atoms from buckyballs is being investigated as a test problem. Somewhat more detail is given on studies of He atom scattering from defective Pt surfaces. Molecular dynamics simulations of He + and Ar + ion sputtering of Pt surfaces are also being done. He atom scattering from Xe overlayers on metal surfaces and the thermalized dissociation of H 2 on Cu(110) are being studied. (R.W.R.) 64 refs

  7. String Analysis for Dynamic Field Access

    DEFF Research Database (Denmark)

    Madsen, Magnus; Andreasen, Esben

    2014-01-01

    domains to reason about dynamic field access in a static analysis tool. A key feature of the domains is that the equal, concatenate and join operations take Ο(1) time. Experimental evaluation on four common JavaScript libraries, including jQuery and Prototype, shows that traditional string domains...

  8. Evaluating Dynamic Analysis Techniques for Program Comprehension

    NARCIS (Netherlands)

    Cornelissen, S.G.M.

    2009-01-01

    Program comprehension is an essential part of software development and software maintenance, as software must be sufficiently understood before it can be properly modified. One of the common approaches in getting to understand a program is the study of its execution, also known as dynamic analysis.

  9. COMPUTER PROGRAMME FOR THE DYNAMIC ANALYSIS

    African Journals Online (AJOL)

    ES OBE

    ABSTRACT. The traditional method of dynamic analysis of tall rigid frames assumes the shear frame model. Models that allow joint rotations with/without the inclusion of the column axial loads give improved results but pose much more computational difficulty. In this work a computer program Natfrequency that determines ...

  10. Structure-based control of complex networks with nonlinear dynamics

    Science.gov (United States)

    Zanudo, Jorge G. T.; Yang, Gang; Albert, Reka

    What can we learn about controlling a system solely from its underlying network structure? Here we use a framework for control of networks governed by a broad class of nonlinear dynamics that includes the major dynamic models of biological, technological, and social processes. This feedback-based framework provides realizable node overrides that steer a system towards any of its natural long term dynamic behaviors, regardless of the dynamic details and system parameters. We use this framework on several real networks, identify the topological characteristics that underlie the predicted node overrides, and compare its predictions to those of classical structural control theory. Finally, we demonstrate this framework's applicability in dynamic models of gene regulatory networks and identify nodes whose override is necessary for control in the general case, but not in specific model instances. This work was supported by NSF Grants PHY 1205840 and IIS 1160995. JGTZ is a recipient of a Stand Up To Cancer - The V Foundation Convergence Scholar Award.

  11. Assessing Numerical Error in Structural Dynamics Using Energy Balance

    Directory of Open Access Journals (Sweden)

    Rabindranath Andujar

    2013-01-01

    Full Text Available This work applies the variational principles of Lagrange and Hamilton to the assessment of numerical methods of linear structural analysis. Different numerical methods are used to simulate the behaviour of three structural configurations and benchmarked in their computation of the Lagrangian action integral over time. According to the principle of energy conservation, the difference at each time step between the kinetic and the strain energies must equal the work done by the external forces. By computing this difference, the degree of accuracy of each combination of numerical methods can be assessed. Moreover, it is often difficult to perceive numerical instabilities due to the inherent complexities of the modelled structures. By means of the proposed procedure, these complexities can be globally controlled and visualized in a straightforward way. The paper presents the variational principles to be considered for the collection and computation of the energy-related parameters (kinetic, strain, dissipative, and external work. It then introduces a systematic framework within which the numerical methods can be compared in a qualitative as well as in a quantitative manner. Finally, a series of numerical experiments is conducted using three simple 2D models subjected to the effect of four different dynamic loadings.

  12. Chaos, dynamical structure and climate variability

    Energy Technology Data Exchange (ETDEWEB)

    Stewart, H.B. [Brookhaven National Lab., Upton, NY (United States). Dept. of Applied Science

    1995-09-01

    Deterministic chaos in dynamical systems offers a new paradigm for understanding irregular fluctuations. Techniques for identifying deterministic chaos from observed data, without recourse to mathematical models, are being developed. Powerful methods exist for reconstructing multidimensional phase space from an observed time series of a single scalar variable; these methods are invaluable when only a single scalar record of the dynamics is available. However, in some applications multiple concurrent time series may be available for consideration as phase space coordinates. Here the authors propose some basic analytical tools for such multichannel time series data, and illustrate them by applications to a simple synthetic model of chaos, to a low-order model of atmospheric circulation, and to two high-resolution paleoclimate proxy data series. The atmospheric circulation model, originally proposed by Lorenz, has 27 principal unknowns; they establish that the chaotic attractor can be embedded in a subspace of eight dimensions by exhibiting a specific subset of eight unknowns which pass multichannel tests for false nearest neighbors. They also show that one of the principal unknowns in the 27-variable model--the global mean sea surface temperature--is of no discernible usefulness in making short-term forecasts.

  13. Structure Based Virtual Screening Studies to Identify Novel Potential Compounds for GPR142 and Their Relative Dynamic Analysis for Study of Type 2 Diabetes

    Science.gov (United States)

    Kaushik, Aman C.; Kumar, Sanjay; Wei, Dong Q.; Sahi, Shakti

    2018-02-01

    GPR142 (G protein receptor 142) is a novel orphan GPCR (G protein coupled receptor) belonging to ‘Class A’ of GPCR family and expressed in beta cells of pancreas. In this study, we reported the structure based virtual screening to identify the hit compounds which can be developed as leads for potential agonists. The results were validated through induced fit docking, pharmacophore modeling and system biology approaches. Since, there is no solved crystal structure of GPR142, we attempted to predict the 3D structure followed by validation and then identification of active site using threading and ab initio methods. Also, structure based virtual screening was performed against a total of 1171519 compounds from different libraries and only top 20 best hit compounds were screened and analyzed. Moreover, the biochemical pathway of GPR142 complex with screened compound2 was also designed and compared with experimental data. Interestingly, compound2 showed an increase in insulin production via Gq mediated signaling pathway suggesting the possible role of novel GPR142 agonists in therapy against type 2 diabetes.

  14. Structure Based Virtual Screening Studies to Identify Novel Potential Compounds for GPR142 and Their Relative Dynamic Analysis for Study of Type 2 Diabetes

    Science.gov (United States)

    Kaushik, Aman C.; Kumar, Sanjay; Wei, Dong Q.; Sahi, Shakti

    2018-01-01

    GPR142 (G protein receptor 142) is a novel orphan GPCR (G protein coupled receptor) belonging to “Class A” of GPCR family and expressed in β cells of pancreas. In this study, we reported the structure based virtual screening to identify the hit compounds which can be developed as leads for potential agonists. The results were validated through induced fit docking, pharmacophore modeling, and system biology approaches. Since, there is no solved crystal structure of GPR142, we attempted to predict the 3D structure followed by validation and then identification of active site using threading and ab initio methods. Also, structure based virtual screening was performed against a total of 1171519 compounds from different libraries and only top 20 best hit compounds were screened and analyzed. Moreover, the biochemical pathway of GPR142 complex with screened compound2 was also designed and compared with experimental data. Interestingly, compound2 showed an increase in insulin production via Gq mediated signaling pathway suggesting the possible role of novel GPR142 agonists in therapy against type 2 diabetes. PMID:29492402

  15. Structure Based Virtual Screening Studies to Identify Novel Potential Compounds for GPR142 and Their Relative Dynamic Analysis for Study of Type 2 Diabetes.

    Science.gov (United States)

    Kaushik, Aman C; Kumar, Sanjay; Wei, Dong Q; Sahi, Shakti

    2018-01-01

    GPR142 (G protein receptor 142) is a novel orphan GPCR (G protein coupled receptor) belonging to "Class A" of GPCR family and expressed in β cells of pancreas. In this study, we reported the structure based virtual screening to identify the hit compounds which can be developed as leads for potential agonists. The results were validated through induced fit docking, pharmacophore modeling, and system biology approaches. Since, there is no solved crystal structure of GPR142, we attempted to predict the 3D structure followed by validation and then identification of active site using threading and ab initio methods. Also, structure based virtual screening was performed against a total of 1171519 compounds from different libraries and only top 20 best hit compounds were screened and analyzed. Moreover, the biochemical pathway of GPR142 complex with screened compound2 was also designed and compared with experimental data. Interestingly, compound2 showed an increase in insulin production via Gq mediated signaling pathway suggesting the possible role of novel GPR142 agonists in therapy against type 2 diabetes.

  16. Structure Based Virtual Screening Studies to Identify Novel Potential Compounds for GPR142 and Their Relative Dynamic Analysis for Study of Type 2 Diabetes

    Directory of Open Access Journals (Sweden)

    Aman C. Kaushik

    2018-02-01

    Full Text Available GPR142 (G protein receptor 142 is a novel orphan GPCR (G protein coupled receptor belonging to “Class A” of GPCR family and expressed in β cells of pancreas. In this study, we reported the structure based virtual screening to identify the hit compounds which can be developed as leads for potential agonists. The results were validated through induced fit docking, pharmacophore modeling, and system biology approaches. Since, there is no solved crystal structure of GPR142, we attempted to predict the 3D structure followed by validation and then identification of active site using threading and ab initio methods. Also, structure based virtual screening was performed against a total of 1171519 compounds from different libraries and only top 20 best hit compounds were screened and analyzed. Moreover, the biochemical pathway of GPR142 complex with screened compound2 was also designed and compared with experimental data. Interestingly, compound2 showed an increase in insulin production via Gq mediated signaling pathway suggesting the possible role of novel GPR142 agonists in therapy against type 2 diabetes.

  17. The dynamics of coronal magnetic structures

    International Nuclear Information System (INIS)

    Weber, W.

    1978-01-01

    An analysis is made of the evolution of coronal magnetic fields due to the interaction with the solar wind. An analysis of the formation of coronal streamers, arising as a result of the stretching of bipolar fields, is given. Numerical simulations of the formation of coronal streamers are presented. Fast-mode shocks as triggers of microturbulence in the solar corona are discussed

  18. Nonlinear Dynamical Analysis for a Plain Bearing

    Directory of Open Access Journals (Sweden)

    Ali Belhamra

    2014-03-01

    Full Text Available This paper investigates the nonlinear dynamic behavior for a plain classic bearing (fluid bearing lubricated by a non-Newtonian fluid of a turbo machine rotating with high speed; this type of fluid contains additives viscosity (couple-stress fluid film. The solution of the nonlinear dynamic problem of this type of bearing is determined with a spatial discretisation of the modified Reynolds' equation written in dynamic mode by using the optimized short bearing theory and a temporal discretisation for equations of rotor motion by the help of Euler's explicit diagram. This study analyzes the dynamic behavior of a rotor supported by two couple-stress fluid film journal lubricant enhances the dynamic stability of the rotor-bearing system considerably compared to that obtained when using a traditional Newtonian lubricant. The analysis shows that the dynamic behavior of a shaft which turns with high velocities is strongly nonlinear even for poor eccentricities of unbalance; the presence of parameters of couple stress allows strongly attenuating the will synchrony (unbalance and asynchrony (whipping amplitudes of vibrations of the shaft which supports more severe conditions (large unbalances.

  19. Generating functional analysis of CDMA detection dynamics

    Energy Technology Data Exchange (ETDEWEB)

    Mimura, Kazushi [Faculty of Information Sciences, Hiroshima City University, Hiroshima 731-3194 (Japan); Okada, Masato [Graduate School of Frontier Sciences, University of Tokyo, Chiba 277-5861 (Japan); Brain Science Institute, RIKEN, Saitama 351-0198 (Japan); PRESTO, Japan Science and Technology Agency, Chiba 277-8561 (Japan)

    2005-11-18

    We investigate the detection dynamics of the parallel interference canceller (PIC) for code-division multiple-access (CDMA) multiuser detection, applied to a randomly spread, fully synchronous base-band uncoded CDMA channel model with additive white Gaussian noise (AWGN) under perfect power control in the large-system limit. It is known that the predictions of the density evolution (DE) can fairly explain the detection dynamics only in the case where the detection dynamics converge. At transients, though, the predictions of DE systematically deviate from computer simulation results. Furthermore, when the detection dynamics fail to converge, the deviation of the predictions of DE from the results of numerical experiments becomes large. As an alternative, generating functional analysis (GFA) can take into account the effect of the Onsager reaction term exactly and does not need the Gaussian assumption of the local field. We present GFA to evaluate the detection dynamics of PIC for CDMA multiuser detection. The predictions of GFA exhibit good consistency with the computer simulation result for any condition, even if the dynamics fail to converge.

  20. Domain decomposition-based structural condensation of large protein structures for understanding their conformational dynamics.

    Science.gov (United States)

    Kim, Jae In; Na, Sungsoo; Eom, Kilho

    2011-01-15

    Normal mode analysis (NMA) with coarse-grained model, such as elastic network model (ENM), has allowed the quantitative understanding of protein dynamics. As the protein size is increased, there emerges the expensive computational process to find the dynamically important low-frequency normal modes due to diagonalization of massive Hessian matrix. In this study, we have provided the domain decomposition-based structural condensation method that enables the efficient computations on low-frequency motions. Specifically, our coarse-graining method is established by coupling between model condensation (MC; Eom et al., J Comput Chem 2007, 28, 1400) and component mode synthesis (Kim et al., J Chem Theor Comput 2009, 5, 1931). A protein structure is first decomposed into substructural units, and then each substructural unit is coarse-grained by MC. Once the NMA is implemented to coarse-grained substructural units, normal modes and natural frequencies for each coarse-grained substructural unit are assembled by using geometric constraints to provide the normal modes and natural frequencies for whole protein structure. It is shown that our coarse-graining method enhances the computational efficiency for analysis of large protein complexes. It is clearly suggested that our coarse-graining method provides the B-factors of 100 large proteins, quantitatively comparable with those obtained from original NMA, with computational efficiency. Moreover, the collective behaviors and/or the correlated motions for model proteins are well delineated by our suggested coarse-grained models, quantitatively comparable with those computed from original NMA. It is implied that our coarse-grained method enables the computationally efficient studies on conformational dynamics of large protein complex.

  1. Structural Analysis of Complex Networks

    CERN Document Server

    Dehmer, Matthias

    2011-01-01

    Filling a gap in literature, this self-contained book presents theoretical and application-oriented results that allow for a structural exploration of complex networks. The work focuses not only on classical graph-theoretic methods, but also demonstrates the usefulness of structural graph theory as a tool for solving interdisciplinary problems. Applications to biology, chemistry, linguistics, and data analysis are emphasized. The book is suitable for a broad, interdisciplinary readership of researchers, practitioners, and graduate students in discrete mathematics, statistics, computer science,

  2. Efficient Analysis of Complex Structures

    Science.gov (United States)

    Kapania, Rakesh K.

    2000-01-01

    Last various accomplishments achieved during this project are : (1) A Survey of Neural Network (NN) applications using MATLAB NN Toolbox on structural engineering especially on equivalent continuum models (Appendix A). (2) Application of NN and GAs to simulate and synthesize substructures: 1-D and 2-D beam problems (Appendix B). (3) Development of an equivalent plate-model analysis method (EPA) for static and vibration analysis of general trapezoidal built-up wing structures composed of skins, spars and ribs. Calculation of all sorts of test cases and comparison with measurements or FEA results. (Appendix C). (4) Basic work on using second order sensitivities on simulating wing modal response, discussion of sensitivity evaluation approaches, and some results (Appendix D). (5) Establishing a general methodology of simulating the modal responses by direct application of NN and by sensitivity techniques, in a design space composed of a number of design points. Comparison is made through examples using these two methods (Appendix E). (6) Establishing a general methodology of efficient analysis of complex wing structures by indirect application of NN: the NN-aided Equivalent Plate Analysis. Training of the Neural Networks for this purpose in several cases of design spaces, which can be applicable for actual design of complex wings (Appendix F).

  3. Multidimensional (OLAP) Analysis for Designing Dynamic Learning Strategy

    Science.gov (United States)

    Rozeva, A.; Deliyska, B.

    2010-10-01

    Learning strategy in an intelligent learning system is generally elaborated on the basis of assessment of the following factors: learner's time for reaction, content of the learning object, amount of learning material in a learning object, learning object specification, e-learning medium and performance control. Current work proposes architecture for dynamic learning strategy design by implementing multidimensional analysis model of learning factors. The analysis model concerns on-line analytical processing (OLAP) of learner's data structured as multidimensional cube. Main components of the architecture are analysis agent for performing the OLAP operations on learner data cube, adaptation generator and knowledge selection agent for performing adaptive navigation in the learning object repository. The output of the analysis agent is involved in dynamic elaboration of learning strategy that fits best to learners profile and behavior. As a result an adaptive learning path for individual learner and for learner groups is generated.

  4. Structural optimization for nonlinear dynamic response

    DEFF Research Database (Denmark)

    Dou, Suguang; Strachan, B. Scott; Shaw, Steven W.

    2015-01-01

    resonant behaviour is being used for a variety of applications in sensing and signal conditioning. In this work, we describe a computational method that provides a systematic means for manipulating and optimizing features of nonlinear resonant responses of mechanical structures that are described...

  5. Structure and dynamics of magnetic nanoparticles

    DEFF Research Database (Denmark)

    Clausen, K.N.; Bødker, F.; Hansen, M.F.

    2000-01-01

    In this paper we present X-ray and neutron diffraction data illustrating aspects of crystal and magnetic structures of ferromagnetic alpha-Fe and antiferromagnetic NiO nanoparticles, as well as inelastic neutron scattering studies of the magnetic fluctuations in NiO and in canted antiferromagnetic...

  6. Oxide Interfaces: emergent structure and dynamics

    Energy Technology Data Exchange (ETDEWEB)

    Clarke, Roy [Univ. of Michigan, Ann Arbor, MI (United States)

    2016-08-16

    This Final Report describes the scientific accomplishments that have been achieved with support from grant DE-FG02-06ER46273 during the period 6/1/2012– 5/31/2016. The overall goals of this program were focused on the behavior of epitaxial oxide heterostructures at atomic length scales (Ångstroms), and correspondingly short time-scales (fs -ns). The results contributed fundamentally to one of the currently most active frontiers in condensed matter physics research, namely to better understand the intricate relationship between charge, lattice, orbital and spin degrees of freedom that are exhibited by complex oxide heterostructures. The findings also contributed towards an important technological goal which was to achieve a better basic understanding of structural and electronic correlations so that the unusual properties of complex oxides can be exploited for energy-critical applications. Specific research directions included: probing the microscopic behavior of epitaxial interfaces and buried layers; novel materials structures that emerge from ionic and electronic reconfiguration at epitaxial interfaces; ultrahigh-resolution mapping of the atomic structure of heterointerfaces using synchrotron-based x-ray surface scattering, including direct methods of phase retrieval; using ultrafast lasers to study the effects of transient strain on coherent manipulation of multi-ferroic order parameters; and investigating structural ordering and relaxation processes in real-time.

  7. Structural Loads Analysis for Wave Energy Converters

    Energy Technology Data Exchange (ETDEWEB)

    van Rij, Jennifer A [National Renewable Energy Laboratory (NREL), Golden, CO (United States); Yu, Yi-Hsiang [National Renewable Energy Laboratory (NREL), Golden, CO (United States); Guo, Yi [National Renewable Energy Laboratory (NREL), Golden, CO (United States)

    2017-06-03

    This study explores and verifies the generalized body-modes method for evaluating the structural loads on a wave energy converter (WEC). Historically, WEC design methodologies have focused primarily on accurately evaluating hydrodynamic loads, while methodologies for evaluating structural loads have yet to be fully considered and incorporated into the WEC design process. As wave energy technologies continue to advance, however, it has become increasingly evident that an accurate evaluation of the structural loads will enable an optimized structural design, as well as the potential utilization of composites and flexible materials, and hence reduce WEC costs. Although there are many computational fluid dynamics, structural analyses and fluid-structure-interaction (FSI) codes available, the application of these codes is typically too computationally intensive to be practical in the early stages of the WEC design process. The generalized body-modes method, however, is a reduced order, linearized, frequency-domain FSI approach, performed in conjunction with the linear hydrodynamic analysis, with computation times that could realistically be incorporated into the WEC design process.

  8. Dynamic response of infrastructure to environmentally induced loads analysis, measurements, testing, and design

    CERN Document Server

    Manolis, George

    2017-01-01

    This book provides state of the art coverage of important current issues in the analysis, measurement, and monitoring of the dynamic response of infrastructure to environmental loads, including those induced by earthquake motion and differential soil settlement. The coverage is in five parts that address numerical methods in structural dynamics, soil–structure interaction analysis, instrumentation and structural health monitoring, hybrid experimental mechanics, and structural health monitoring for bridges. Examples that give an impression of the scope of the topics discussed include the seismic analysis of bridges, soft computing in earthquake engineering, use of hybrid methods for soil–structure interaction analysis, effects of local site conditions on the inelastic dynamic analysis of bridges, embedded models in wireless sensor networks for structural health monitoring, recent developments in seismic simulation methods, and seismic performance assessment and retrofit of structures. Throughout, the empha...

  9. Dynamic analysis: a new point of view

    Science.gov (United States)

    Chaves, Eduardo W. V.

    2016-05-01

    In this article, an alternative to the classical dynamic equation formulation is presented. To achieve this goal, we need to derive the reciprocal theorem in rates and the principle of virtual work in rates, in a small deformation regime, with which we will be able to obtain an expression for damping force. In this new formulation, some terms that are not commonly considered in the classical formulation appear, e.g., the term that is function of jerk (the rate of change of acceleration). Moreover, in this formulation the term that characterizes material nonlinearity, in dynamic analysis, appears naturally.

  10. Analysis by numerical calculations of the depth and dynamics of the penetration of ordered cellular structure made by casting from AlSi10Mg eutectic alloy

    Directory of Open Access Journals (Sweden)

    M. Małysza

    2011-07-01

    Full Text Available Owing to high plastic deformability while maintaining stress values constant and relatively low, ordered cellular structures arecharacterised by excellent properties and the ability to dissipate the impact energy. Due to the low weight, structures of this type can beused, among others, for different parts of motor vehicles. For tests, a trapezoidal ordered cellular structure of 50.8 x 50.8 x 25.4 (mmoverall dimensions was selected. It was made as an investment casting from AlSi9Mg eutectic alloy by the method of Rapid Prototyping(RP. During FEM computations using an Abaqus programme, it was assumed that the material is isotropic and exhibits the features of anelastic – plastic body, introducing to calculations the, listed in a table, values of the stress-strain curve obtained in tensile tests performedon a MTS testing machine (10T. The computations used Johnson - Cook model, which is usually sufficiently accurate when modelling thephenomena of penetration of an element by an object of high initial velocity. The performed numerical calculations allowed identification

  11. Map updates in a dynamic Voronoi data structure

    DEFF Research Database (Denmark)

    Mioc, Darka; Antón Castro, Francesc/François; Gold, C. M.

    2006-01-01

    algorithms for addition, deletion, and motion of spatial objects) on the dynamic Voronoi data structure. The formalization of map commands led to the development of a spatial language comprising a set of atomic operations or constructs on spatial primitives (points and lines), powerful enough to define...... Voronoi data structure is a spatial language or a map grammar that is deterministic and reversible....

  12. A compact data structure for representing a dynamic multiset

    DEFF Research Database (Denmark)

    Katajainen, Jyrki; Rao, S. Srinivasa

    2010-01-01

    We develop a data structure for maintaining a dynamic multiset that uses O(nlglgn/lgn) bits and O(1) words, in addition to the space required by the n elements stored, supports searches in O(lgn) worst-case time and updates in O(lgn) amortized time. Compared to earlier data structures, we improve...

  13. Molecular dynamics of the structure and thermodynamics of dusty ...

    African Journals Online (AJOL)

    The static structure and thermodynamic properties of two-dimensional dusty plasma are analyzed for some typical values of coupling and screening parameters using classical molecular dynamics. Radial distribution function and static structure factor are computed. The radial distribution functions display the typical ...

  14. Seismic soil structure interaction: analysis and centrifuge model studies

    International Nuclear Information System (INIS)

    Finn, W.D.L.; Ledbetter, R.H.; Beratan, L.L.

    1985-01-01

    A method for non-linear dynamic effective stress analysis is introduced which is applicable to soil-structure interaction problems. Full interaction including slip between structure and foundation is taken into account and the major factors are included which must be considered when computing dynamic soil response. An experimental investigation was conducted using simulated earthquake tests on centrifuged geotechnical models in order to obtain prototype response data of foundation soils carrying both surface and embedded structures and to validate the dynamic effective stress analysis. Horizontal and vertical accelerations were measured at various points on structures and in the sand foundation. Seismically-induced pore water pressure changes were also measured at various locations in the foundation. Computer plots of the data were obtained while the centrifuge was in flight and representative samples are presented. The results show clearly the pronounced effect that increasing pore water pressures have on dynamic response. It is demonstrated that a coherent picture of dynamic response of soil-structure systems is provided by dynamic effective stress non-linear analysis. Based on preliminary results, it appears that the pore water pressure effects can be predicted

  15. Seismic soil-structure interaction: Analysis and centrifuge model studies

    International Nuclear Information System (INIS)

    Finn, W.D.L.; Ledbetter, R.H.; Beratan, L.L.

    1986-01-01

    A method for nonlinear dynamic effective stress analysis applicable to soil-structure interaction problems is introduced. Full interaction including slip between structure and foundation is taken into account and the major factors that must be considered when computing dynamic soil response are included. An experimental investigation using simulated earthquake tests on centrifuged geotechnical models was conducted to obtain prototype response data of foundation soils carrying both surface and embedded structures and to validate the dynamic effective stress analysis. The centrifuge tests were conducted in the Geotechnical Centrifuge at Cambridge University, England. Horizontal and vertical accelerations were measured at various points on structures and in the sand foundation. Seismically induced pore water pressure changes were also measured at various locations in the foundation. Computer plots of the data were obtained while the centrifuge was in flight and representative samples are presented. The results clearly show the pronounced effect of increasing pore water pressures on dynamic response. It is demonstrated that a coherent picture of dynamic response of soil-structure systems is provided by dynamic effective stress nonlinear analysis. On the basis of preliminary results, it appears that the effects of pore water pressure can be predicted. (orig.)

  16. A Comparison of Pseudo-Maximum Likelihood and Asymptotically Distribution-Free Dynamic Factor Analysis Parameter Estimation in Fitting Covariance-Structure Models to Block-Toeplitz Representing Single-Subject Multivariate Time-Series

    NARCIS (Netherlands)

    Molenaar, P.C.M.; Nesselroade, J.R.

    1998-01-01

    The study of intraindividual variability pervades empirical inquiry in virtually all subdisciplines of psychology. The statistical analysis of multivariate time-series data - a central product of intraindividual investigations - requires special modeling techniques. The dynamic factor model (DFM),

  17. Flight Dynamics Analysis Branch 2005 Technical Highlights

    Science.gov (United States)

    2005-01-01

    This report summarizes the major activities and accomplishments carried out by the Flight Dynamics Analysis Branch (FDAB), Code 595, in support of flight projects and technology development initiatives in Fiscal Year (FY) 2005. The report is intended to serve as a summary of the type of support carried out by the FDAB, as well as a concise reference of key accomplishments and mission experience derived from the various mission support roles. The primary focus of the FDAB is to provide expertise in the disciplines of flight dynamics including spacecraft navigation (autonomous and ground based); spacecraft trajectory design and maneuver planning; attitude analysis; attitude determination and sensor calibration; and attitude control subsystem (ACS) analysis and design. The FDAB currently provides support for missions and technology development projects involving NASA, other government agencies, academia, and private industry.

  18. PCI-SS: MISO dynamic nonlinear protein secondary structure prediction

    Directory of Open Access Journals (Sweden)

    Aboul-Magd Mohammed O

    2009-07-01

    Full Text Available Abstract Background Since the function of a protein is largely dictated by its three dimensional configuration, determining a protein's structure is of fundamental importance to biology. Here we report on a novel approach to determining the one dimensional secondary structure of proteins (distinguishing α-helices, β-strands, and non-regular structures from primary sequence data which makes use of Parallel Cascade Identification (PCI, a powerful technique from the field of nonlinear system identification. Results Using PSI-BLAST divergent evolutionary profiles as input data, dynamic nonlinear systems are built through a black-box approach to model the process of protein folding. Genetic algorithms (GAs are applied in order to optimize the architectural parameters of the PCI models. The three-state prediction problem is broken down into a combination of three binary sub-problems and protein structure classifiers are built using 2 layers of PCI classifiers. Careful construction of the optimization, training, and test datasets ensures that no homology exists between any training and testing data. A detailed comparison between PCI and 9 contemporary methods is provided over a set of 125 new protein chains guaranteed to be dissimilar to all training data. Unlike other secondary structure prediction methods, here a web service is developed to provide both human- and machine-readable interfaces to PCI-based protein secondary structure prediction. This server, called PCI-SS, is available at http://bioinf.sce.carleton.ca/PCISS. In addition to a dynamic PHP-generated web interface for humans, a Simple Object Access Protocol (SOAP interface is added to permit invocation of the PCI-SS service remotely. This machine-readable interface facilitates incorporation of PCI-SS into multi-faceted systems biology analysis pipelines requiring protein secondary structure information, and greatly simplifies high-throughput analyses. XML is used to represent the input

  19. Model Independent Analysis of Beam Centroid Dynamics in Accelerators

    Energy Technology Data Exchange (ETDEWEB)

    Wang, Chun-xi

    2003-04-21

    Fundamental issues in Beam-Position-Monitor (BPM)-based beam dynamics observations are studied in this dissertation. The major topic is the Model-Independent Analysis (MIA) of beam centroid dynamics. Conventional beam dynamics analysis requires a certain machine model, which itself of ten needs to be refined by beam measurements. Instead of using any particular machine model, MIA relies on a statistical analysis of the vast amount of BPM data that often can be collected non-invasively during normal machine operation. There are two major parts in MIA. One is noise reduction and degrees-of-freedom analysis using a singular value decomposition of a BPM-data matrix, which constitutes a principal component analysis of BPM data. The other is a physical base decomposition of the BPM-data matrix based on the time structure of pulse-by-pulse beam and/or machine parameters. The combination of these two methods allows one to break the resolution limit set by individual BPMs and observe beam dynamics at more accurate levels. A physical base decomposition is particularly useful for understanding various beam dynamics issues. MIA improves observation and analysis of beam dynamics and thus leads to better understanding and control of beams in both linacs and rings. The statistical nature of MIA makes it potentially useful in other fields. Another important topic discussed in this dissertation is the measurement of a nonlinear Poincare section (one-turn) map in circular accelerators. The beam dynamics in a ring is intrinsically nonlinear. In fact, nonlinearities are a major factor that limits stability and influences the dynamics of halos. The Poincare section map plays a basic role in characterizing and analyzing such a periodic nonlinear system. Although many kinds of nonlinear beam dynamics experiments have been conducted, no direct measurement of a nonlinear map has been reported for a ring in normal operation mode. This dissertation analyzes various issues concerning map

  20. Model Independent Analysis of Beam Centroid Dynamics in Accelerators

    International Nuclear Information System (INIS)

    Wang, Chun-xi

    2003-01-01

    Fundamental issues in Beam-Position-Monitor (BPM)-based beam dynamics observations are studied in this dissertation. The major topic is the Model-Independent Analysis (MIA) of beam centroid dynamics. Conventional beam dynamics analysis requires a certain machine model, which itself of ten needs to be refined by beam measurements. Instead of using any particular machine model, MIA relies on a statistical analysis of the vast amount of BPM data that often can be collected non-invasively during normal machine operation. There are two major parts in MIA. One is noise reduction and degrees-of-freedom analysis using a singular value decomposition of a BPM-data matrix, which constitutes a principal component analysis of BPM data. The other is a physical base decomposition of the BPM-data matrix based on the time structure of pulse-by-pulse beam and/or machine parameters. The combination of these two methods allows one to break the resolution limit set by individual BPMs and observe beam dynamics at more accurate levels. A physical base decomposition is particularly useful for understanding various beam dynamics issues. MIA improves observation and analysis of beam dynamics and thus leads to better understanding and control of beams in both linacs and rings. The statistical nature of MIA makes it potentially useful in other fields. Another important topic discussed in this dissertation is the measurement of a nonlinear Poincare section (one-turn) map in circular accelerators. The beam dynamics in a ring is intrinsically nonlinear. In fact, nonlinearities are a major factor that limits stability and influences the dynamics of halos. The Poincare section map plays a basic role in characterizing and analyzing such a periodic nonlinear system. Although many kinds of nonlinear beam dynamics experiments have been conducted, no direct measurement of a nonlinear map has been reported for a ring in normal operation mode. This dissertation analyzes various issues concerning map

  1. Stereological analysis of spatial structures

    DEFF Research Database (Denmark)

    Hansen, Linda Vadgård

    The thesis deals with stereological analysis of spatial structures. One area of focus has been to improve the precision of well-known stereological estimators by including information that is available via automatic image analysis. Furthermore, the thesis presents a stochastic model for star......-shaped three-dimensional objects using the radial function. It appears that the model is highly fleksiblel in the sense that it can be used to describe an object with arbitrary irregular surface. Results on the distribution of well-known local stereological volume estimators are provided....

  2. International Conference on Structural Nonlinear Dynamics and Diagnosis

    CERN Document Server

    CSNDD 2012; CSNDD 2014

    2015-01-01

    This book, which presents the peer-reviewed post-proceedings of CSNDD 2012 and CSNDD 2014, addresses the important role that relevant concepts and tools from nonlinear and complex dynamics could play in present and future engineering applications. It includes 22 chapters contributed by outstanding researchers and covering various aspects of applications, including: structural health monitoring, diagnosis and damage detection, experimental methodologies, active vibration control and smart structures, passive control of structures using nonlinear energy sinks, vibro-impact dynamic MEMS/NEMS/AFM, energy-harvesting materials and structures, and time-delayed feedback control, as well as aspects of deterministic versus stochastic dynamics and control of nonlinear phenomena in physics.  Researchers and engineers interested in the challenges posed and opportunities offered by nonlinearities in the development of passive and active control strategies, energy harvesting, novel design criteria, modeling and characteriz...

  3. Plasmodium vivax Population Structure and Transmission Dynamics in Sabah Malaysia

    Science.gov (United States)

    Abdullah, Noor Rain; Barber, Bridget E.; William, Timothy; Norahmad, Nor Azrina; Satsu, Umi Rubiah; Muniandy, Prem Kumar; Ismail, Zakiah; Grigg, Matthew J.; Jelip, Jenarun; Piera, Kim; von Seidlein, Lorenz; Yeo, Tsin W.; Anstey, Nicholas M.; Price, Ric N.; Auburn, Sarah

    2013-01-01

    Despite significant progress in the control of malaria in Malaysia, the complex transmission dynamics of P. vivax continue to challenge national efforts to achieve elimination. To assess the impact of ongoing interventions on P. vivax transmission dynamics in Sabah, we genotyped 9 short tandem repeat markers in a total of 97 isolates (8 recurrences) from across Sabah, with a focus on two districts, Kota Marudu (KM, n = 24) and Kota Kinabalu (KK, n = 21), over a 2 year period. STRUCTURE analysis on the Sabah-wide dataset demonstrated multiple sub-populations. Significant differentiation (F ST  = 0.243) was observed between KM and KK, located just 130 Km apart. Consistent with low endemic transmission, infection complexity was modest in both KM (mean MOI  = 1.38) and KK (mean MOI  = 1.19). However, population diversity remained moderate (H E  = 0.583 in KM and H E  = 0.667 in KK). Temporal trends revealed clonal expansions reflecting epidemic transmission dynamics. The haplotypes of these isolates declined in frequency over time, but persisted at low frequency throughout the study duration. A diverse array of low frequency isolates were detected in both KM and KK, some likely reflecting remnants of previous expansions. In accordance with clonal expansions, high levels of Linkage Disequilibrium (I A S >0.5 [Ppopulation appears to have rendered this low endemic setting vulnerable to epidemic expansions. Migration may play an important role in the introduction of new parasite strains leading to epidemic expansions, with important implications for malaria elimination. PMID:24358203

  4. Plasmodium vivax population structure and transmission dynamics in Sabah Malaysia.

    Science.gov (United States)

    Abdullah, Noor Rain; Barber, Bridget E; William, Timothy; Norahmad, Nor Azrina; Satsu, Umi Rubiah; Muniandy, Prem Kumar; Ismail, Zakiah; Grigg, Matthew J; Jelip, Jenarun; Piera, Kim; von Seidlein, Lorenz; Yeo, Tsin W; Anstey, Nicholas M; Price, Ric N; Auburn, Sarah

    2013-01-01

    Despite significant progress in the control of malaria in Malaysia, the complex transmission dynamics of P. vivax continue to challenge national efforts to achieve elimination. To assess the impact of ongoing interventions on P. vivax transmission dynamics in Sabah, we genotyped 9 short tandem repeat markers in a total of 97 isolates (8 recurrences) from across Sabah, with a focus on two districts, Kota Marudu (KM, n = 24) and Kota Kinabalu (KK, n = 21), over a 2 year period. STRUCTURE analysis on the Sabah-wide dataset demonstrated multiple sub-populations. Significant differentiation (F ST  = 0.243) was observed between KM and KK, located just 130 Km apart. Consistent with low endemic transmission, infection complexity was modest in both KM (mean MOI  = 1.38) and KK (mean MOI  = 1.19). However, population diversity remained moderate (H E  = 0.583 in KM and H E  = 0.667 in KK). Temporal trends revealed clonal expansions reflecting epidemic transmission dynamics. The haplotypes of these isolates declined in frequency over time, but persisted at low frequency throughout the study duration. A diverse array of low frequency isolates were detected in both KM and KK, some likely reflecting remnants of previous expansions. In accordance with clonal expansions, high levels of Linkage Disequilibrium (I A (S) >0.5 [PSabah's shrinking P. vivax population appears to have rendered this low endemic setting vulnerable to epidemic expansions. Migration may play an important role in the introduction of new parasite strains leading to epidemic expansions, with important implications for malaria elimination.

  5. Structure and dynamics of ringed galaxies

    International Nuclear Information System (INIS)

    Buta, R.J.

    1984-01-01

    In many spiral and SO galaxies, single or multiple ring structures are visible in the disk. These inner rings (r), outer rings (R), and nuclear rings (nr) were investigated by means of morphology, photometry, and spectroscopy in order to provide basic data on a long neglected phenomenon. The metric properties of each ring are investigated and found to correlate with the structure of the parent galaxy. When properly calibrated, inner rings in barred (SB) systems can be used as geometric extragalactic distance indicators to distances in excess of 100 Mpc. Other statistics are presented that confirm previous indications that the rings have preferred shapes, relative sizes, and orientations with respect to bars. A survey is made of the less homogeneous non-barred (SA) ringed systems, and the causes of the inhomogeneity are isolated. It is shown that rings can be identified in multiple-ring SA systems that are exactly analogous to those in barred spirals

  6. Dynamic kirigami structures for integrated solar tracking

    Science.gov (United States)

    Lamoureux, Aaron; Lee, Kyusang; Shlian, Matthew; Forrest, Stephen R.; Shtein, Max

    2015-01-01

    Optical tracking is often combined with conventional flat panel solar cells to maximize electrical power generation over the course of a day. However, conventional trackers are complex and often require costly and cumbersome structural components to support system weight. Here we use kirigami (the art of paper cutting) to realize novel solar cells where tracking is integral to the structure at the substrate level. Specifically, an elegant cut pattern is made in thin-film gallium arsenide solar cells, which are then stretched to produce an array of tilted surface elements which can be controlled to within ±1°. We analyze the combined optical and mechanical properties of the tracking system, and demonstrate a mechanically robust system with optical tracking efficiencies matching conventional trackers. This design suggests a pathway towards enabling new applications for solar tracking, as well as inspiring a broader range of optoelectronic and mechanical devices. PMID:26348820

  7. Offline analysis of HEP events by ''dynamic perceptron'' neural network

    International Nuclear Information System (INIS)

    Perrone, A.L.; Basti, G.; Messi, R.; Pasqualucci, E.; Paoluzi, L.

    1997-01-01

    In this paper we start from a critical analysis of the fundamental problems of the parallel calculus in linear structures and of their extension to the partial solutions obtained with non-linear architectures. Then, we present shortly a new dynamic architecture able to solve the limitations of the previous architectures through an automatic re-definition of the topology. This architecture is applied to real-time recognition of particle tracks in high-energy accelerators. (orig.)

  8. Integrability of dynamical systems algebra and analysis

    CERN Document Server

    Zhang, Xiang

    2017-01-01

    This is the first book to systematically state the fundamental theory of integrability and its development of ordinary differential equations with emphasis on the Darboux theory of integrability and local integrability together with their applications. It summarizes the classical results of Darboux integrability and its modern development together with their related Darboux polynomials and their applications in the reduction of Liouville and elementary integrabilty and in the center—focus problem, the weakened Hilbert 16th problem on algebraic limit cycles and the global dynamical analysis of some realistic models in fields such as physics, mechanics and biology. Although it can be used as a textbook for graduate students in dynamical systems, it is intended as supplementary reading for graduate students from mathematics, physics, mechanics and engineering in courses related to the qualitative theory, bifurcation theory and the theory of integrability of dynamical systems.

  9. Cluster analysis of word frequency dynamics

    Science.gov (United States)

    Maslennikova, Yu S.; Bochkarev, V. V.; Belashova, I. A.

    2015-01-01

    This paper describes the analysis and modelling of word usage frequency time series. During one of previous studies, an assumption was put forward that all word usage frequencies have uniform dynamics approaching the shape of a Gaussian function. This assumption can be checked using the frequency dictionaries of the Google Books Ngram database. This database includes 5.2 million books published between 1500 and 2008. The corpus contains over 500 billion words in American English, British English, French, German, Spanish, Russian, Hebrew, and Chinese. We clustered time series of word usage frequencies using a Kohonen neural network. The similarity between input vectors was estimated using several algorithms. As a result of the neural network training procedure, more than ten different forms of time series were found. They describe the dynamics of word usage frequencies from birth to death of individual words. Different groups of word forms were found to have different dynamics of word usage frequency variations.

  10. Cluster analysis of word frequency dynamics

    International Nuclear Information System (INIS)

    Maslennikova, Yu S; Bochkarev, V V; Belashova, I A

    2015-01-01

    This paper describes the analysis and modelling of word usage frequency time series. During one of previous studies, an assumption was put forward that all word usage frequencies have uniform dynamics approaching the shape of a Gaussian function. This assumption can be checked using the frequency dictionaries of the Google Books Ngram database. This database includes 5.2 million books published between 1500 and 2008. The corpus contains over 500 billion words in American English, British English, French, German, Spanish, Russian, Hebrew, and Chinese. We clustered time series of word usage frequencies using a Kohonen neural network. The similarity between input vectors was estimated using several algorithms. As a result of the neural network training procedure, more than ten different forms of time series were found. They describe the dynamics of word usage frequencies from birth to death of individual words. Different groups of word forms were found to have different dynamics of word usage frequency variations

  11. Disconnecting structure and dynamics in glassy thin films

    Science.gov (United States)

    Sussman, Daniel; Schoenholz, Samuel; Cubuk, Ekin; Liu, Andrea

    The dynamics near the surface of a glassy film are markedly different from those in the bulk. We investigate whether the differences between surface and bulk dynamics can be explained by differences in local microscopic structure. We show that machine learning methods that successfully identify strong correlations between local structure and particle rearrangement dynamics in the bulk completely fail to detect key aspects of thin-film glassy dynamics. Furthermore, we show that no combination of local structural features drawn from a very general set of two- and multi-point functions is able to distinguish between particles at the center of film and those in near the surface where the dynamics are strongly perturbed. We note that the behavior of glassy films has often been interpreted via a model with a glassy, immobile layer near the center of the film and liquid-like mobile layers near free interfaces. Our results suggest that the two populations are indistinguishable in structure, necessitating a purely dynamical theory for additional relaxation processes in the film.

  12. Population genetic analysis of microsatellite variation of guppies (Poecilia reticulata) in Trinidad and Tobago: evidence for a dynamic source-sink metapopulation structure, founder events and population bottlenecks.

    Science.gov (United States)

    Barson, N J; Cable, J; Van Oosterhout, C

    2009-03-01

    Riverine fish populations are traditionally considered to be highly structured and subject to strong genetic drift. Here, we use microsatellites to analyse the population structure of the guppy (Poecilia reticulata), focussing on the headwater floodplain area of the Caroni drainage in Trinidad. We also analyse the population genetics of guppies in the Northern Drainage in Trinidad, a habitat characterized by rivers flowing directly into the sea, and a small isolated population in Tobago. Upland Caroni populations are highly differentiated and display low levels of genetic diversity. However, we found no evidence to suggest that these upland populations experienced recent population crashes and the populations appear to approach mutation-drift equilibrium. Dominant downstream migration over both short- and long-time frames has a strong impact on the population genetics of lowland Caroni populations. This drainage system could be considered a source-sink metapopulation, with the tributary furthest downstream representing a 'super sink', receiving immigrants from rivers upstream in the drainage. Moreover, the effective population size in the lowlands is surprisingly low in comparison with the apparently large census population sizes.

  13. Nonlinear dynamic soil-structure interaction in earthquake engineering

    International Nuclear Information System (INIS)

    Nieto-Ferro, Alex

    2013-01-01

    The present work addresses a computational methodology to solve dynamic problems coupling time and Laplace domain discretizations within a domain decomposition approach. In particular, the proposed methodology aims at meeting the industrial need of performing more accurate seismic risk assessments by accounting for three-dimensional dynamic soil-structure interaction (DSSI) in nonlinear analysis. Two subdomains are considered in this problem. On the one hand, the linear and unbounded domain of soil which is modelled by an impedance operator computed in the Laplace domain using a Boundary Element (BE) method; and, on the other hand, the superstructure which refers not only to the structure and its foundations but also to a region of soil that possibly exhibits nonlinear behaviour. The latter sub-domain is formulated in the time domain and discretized using a Finite Element (FE) method. In this framework, the DSSI forces are expressed as a time convolution integral whose kernel is the inverse Laplace transform of the soil impedance matrix. In order to evaluate this convolution in the time domain by means of the soil impedance matrix (available in the Laplace domain), a Convolution Quadrature-based approach called the Hybrid Laplace-Time domain Approach (HLTA), is thus introduced. Its numerical stability when coupled to Newmark time integration schemes is subsequently investigated through several numerical examples of DSSI applications in linear and nonlinear analyses. The HLTA is finally tested on a more complex numerical model, closer to that of an industrial seismic application, and good results are obtained when compared to the reference solutions. (author)

  14. A combined molecular dynamics simulation and quantum mechanics study on mercaptopurine interaction with the cucurbit [6,7] urils: Analysis of electronic structure.

    Science.gov (United States)

    Zaboli, Maryam; Raissi, Heidar

    2018-01-05

    In the current study, the probability of complex formation between mercaptopurine drug with cucurbit[6]urils and cucurbit[7]urils has been investigated. The calculations for geometry optimization of complexes have been carried out by means of DFT (B3LYP), DFT-D (B3LYP-D) and M06-2X methods. The Atoms In Molecules (AIM), Natural Bond Orbital (NBO), NMR, the density of states (DOSs) and frontier molecular orbital (MO) analyses have been done on the inclusion complexes. In addition, the UV-Vis spectra of the first eight states have been obtained by CAM-B3LYP/TD-DFT calculation. The obtained results of the complexation process reveal that CB[7]-DRG complexes are more favorable than that of CB[6]-DRG interactions. Furthermore, our theoretical results show that configurations III and I are the most stable configurations related to the CB[6]/DRG and CB[7]/DRG interactions, respectively. The positive ∇ 2 ρ (r) and HC values at the bond critical points indicate that exist the weak H-bonds between CB[6] and CB[7] with H atoms of the drug molecule. The obtained negative binding energy values of CB[7]-DRG interaction in solution phase show the stability of these complexes in the aqueous medium. Also, all of the observed parameters of molecular dynamics simulation such as the number of contacts, hydrogen bonding, center-of-mass distance and van der Waals energy values confirm the encapsulation of mercaptopurine molecule inside the cucurbit[7]urils cavity at about 3.2ns. Copyright © 2017 Elsevier B.V. All rights reserved.

  15. Structural dynamics of the cell nucleus

    Science.gov (United States)

    Wiegert, Simon; Bading, Hilmar

    2011-01-01

    Neuronal morphology plays an essential role in signal processing in the brain. Individual neurons can undergo use-dependent changes in their shape and connectivity, which affects how intracellular processes are regulated and how signals are transferred from one cell to another in a neuronal network. Calcium is one of the most important intracellular second messengers regulating cellular morphologies and functions. In neurons, intracellular calcium levels are controlled by ion channels in the plasma membrane such as NMDA receptors (NMDARs), voltage-gated calcium channels (VGCCs) and certain α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid receptors (AMPARs) as well as by calcium exchange pathways between the cytosol and internal calcium stores including the endoplasmic reticulum and mitochondria. Synaptic activity and the subsequent opening of ligand and/or voltage-gated calcium channels can initiate cytosolic calcium transients which propagate towards the cell soma and enter the nucleus via its nuclear pore complexes (NPCs) embedded in the nuclear envelope. We recently described the discovery that in hippocampal neurons the morphology of the nucleus affects the calcium dynamics within the nucleus. Here we propose that nuclear infoldings determine whether a nucleus functions as an integrator or detector of oscillating calcium signals. We outline possible ties between nuclear mophology and transcriptional activity and discuss the importance of extending the approach to whole cell calcium signal modeling in order to understand synapse-to-nucleus communication in healthy and dysfunctional neurons. PMID:21738832

  16. Correct use of Membrane Elements in Structural Analysis

    Directory of Open Access Journals (Sweden)

    Rothman Timothy

    2016-01-01

    Full Text Available Structural analysis of consumer electronic devices such as phones and tablets involves Finite Element Analysis (FEA. Dynamic loading conditions such as device dropping and bending dictate accurate FEA models to reduce design risk in many areas. The solid elements typically used in structural analysis do not have integration points on the surface. The outer surface is of most interest because that is where the cracks start. Analysts employ a post processing trick through using membranes to bring accurate stress/strain results to the surface. This paper explains numerical issues with implementation of membranes and recommends a methodology for accurate structural analysis.

  17. The dynamic reaction of containment structures (Sarcophagus) to seismic waves and vibrations

    International Nuclear Information System (INIS)

    Nemchinov Marenkov, U.I.

    1995-01-01

    This work deals with the dynamic reaction of containment structures (sarcophagus) to seismic waves and vibrations. It shows the results of experimental vibration measurements of the turbogenerators. It gives an analysis of the level of seismic and vibration effects on the load bearing structures of the sarcophagus and it puts forward recommendations relating to a permissible operating level for any vibroactive machinery which may be used during the reconstruction and transformation of the structure. (O.L.). 6 refs., 3 figs., 2 tabs

  18. Evolutionary dynamics for persistent cooperation in structured populations

    Science.gov (United States)

    Li, Yan; Liu, Xinsheng; Claussen, Jens Christian; Guo, Wanlin

    2015-06-01

    The emergence and maintenance of cooperative behavior is a fascinating topic in evolutionary biology and social science. The public goods game (PGG) is a paradigm for exploring cooperative behavior. In PGG, the total resulting payoff is divided equally among all participants. This feature still leads to the dominance of defection without substantially magnifying the public good by a multiplying factor. Much effort has been made to explain the evolution of cooperative strategies, including a recent model in which only a portion of the total benefit is shared by all the players through introducing a new strategy named persistent cooperation. A persistent cooperator is a contributor who is willing to pay a second cost to retrieve the remaining portion of the payoff contributed by themselves. In a previous study, this model was analyzed in the framework of well-mixed populations. This paper focuses on discussing the persistent cooperation in lattice-structured populations. The evolutionary dynamics of the structured populations consisting of three types of competing players (pure cooperators, defectors, and persistent cooperators) are revealed by theoretical analysis and numerical simulations. In particular, the approximate expressions of fixation probabilities for strategies are derived on one-dimensional lattices. The phase diagrams of stationary states, and the evolution of frequencies and spatial patterns for strategies are illustrated on both one-dimensional and square lattices by simulations. Our results are consistent with the general observation that, at least in most situations, a structured population facilitates the evolution of cooperation. Specifically, here we find that the existence of persistent cooperators greatly suppresses the spreading of defectors under more relaxed conditions in structured populations compared to that obtained in well-mixed populations.

  19. Plasma turbulence. Structure formation, selection rule, dynamic response and dynamics transport

    International Nuclear Information System (INIS)

    Ito, Sanae I.

    2010-01-01

    The five-year project of Grant-in-Aid for Specially Promoted Research entitled general research on the structure formation and selection rule in plasma turbulence had brought many outcomes. Based on these outcomes, the Grant-in-Aid for Scientific Research (S) program entitled general research on dynamic response and dynamic transport in plasma turbulence has started. In the present paper, the state-of-the-art of the research activities on the structure formation, selection rule and dynamics in plasma turbulence are reviewed with reference to outcomes of these projects. (author)

  20. Structure-based control of complex networks with nonlinear dynamics

    Science.gov (United States)

    Zañudo, Jorge Gomez Tejeda; Yang, Gang; Albert, Réka

    2017-01-01

    What can we learn about controlling a system solely from its underlying network structure? Here we adapt a recently developed framework for control of networks governed by a broad class of nonlinear dynamics that includes the major dynamic models of biological, technological, and social processes. This feedback-based framework provides realizable node overrides that steer a system toward any of its natural long-term dynamic behaviors, regardless of the specific functional forms and system parameters. We use this framework on several real networks, identify the topological characteristics that underlie the predicted node overrides, and compare its predictions to those of structural controllability in control theory. Finally, we demonstrate this framework’s applicability in dynamic models of gene regulatory networks and identify nodes whose override is necessary for control in the general case but not in specific model instances. PMID:28655847