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Sample records for anaerobic microbial transformations

  1. Anaerobic microbial transformations of radioactive wastes in subsurface environments

    Energy Technology Data Exchange (ETDEWEB)

    Francis, A.J.

    1984-01-01

    Radioactive wastes disposed of in subsurface environments contain a variety of radionuclides and organic compounds. Microorganisms play a major role in the transformation of organic and inorganic constituents of the waste and are partly responsible for the problems encountered at the waste disposal sites. These include microbial degradation of waste forms resulting in trench cover subsidence, migration of radionuclides, and production of radioactive gases such as /sup 14/CO/sub 2/, /sup 14/CH/sub 4/, HT, and CH/sub 3/T. Microbial processes involved in solubilization, mobilization, and immobilization of toxic metals under aerobic and anaerobic conditions are reviewed. Complexing agents and several organic acids produced by microbial action affect mobilization of radionuclides and heavy metals from the wastes. Microorganisms play a significant role in the transformation and cycling of tritium in the environment by (i) oxidation of tritium and tritiated methane under aerobic conditions and (ii) production of tritium and tritiated methane from wastes containing tritiated water and organic compounds under anaerobic conditions. 23 references, 2 figures, 2 tables.

  2. Anaerobic microbial transformations of radioactive wastes in subsurface environments

    International Nuclear Information System (INIS)

    Radioactive wastes disposed of in subsurface environments contain a variety of radionuclides and organic compounds. Microorganisms play a major role in the transformation of organic and inorganic constituents of the waste and are partly responsible for the problems encountered at the waste disposal sites. These include microbial degradation of waste forms resulting in trench cover subsidence, migration of radionuclides, and production of radioactive gases such as 14CO2, 14CH4, HT, and CH3T. Microbial processes involved in solubilization, mobilization, and immobilization of toxic metals under aerobic and anaerobic conditions are reviewed. Complexing agents and several organic acids produced by microbial action affect mobilization of radionuclides and heavy metals from the wastes. Microorganisms play a significant role in the transformation and cycling of tritium in the environment by (i) oxidation of tritium and tritiated methane under aerobic conditions and (ii) production of tritium and tritiated methane from wastes containing tritiated water and organic compounds under anaerobic conditions. 23 references, 2 figures, 2 tables

  3. Anaerobic microbial transformations of uranium and toxic metals in wastes

    International Nuclear Information System (INIS)

    The effects of anaerobic microbial activity on the dissolution and immobilization of uranium and toxic metals from uranium processing wastes were investigated. The wastes contained As, Cd, Cr, Cu, Hg, Pb, Ni, U and Zn. A substantial quantity of the toxic metals associated with exchangeable, carbonate, and iron oxide fractions were solubilized by indirect action due to production of organic acid metabolites or by direct enzymatic action. Several of the solubilized metals were immobilized due to biosorption by bacterial biomass, reduction and precipitation, and redistribution to a more stable form with the minerals in the waste. Anaerobic bacterial treatment of wastes resulted in the removal of a large fraction of soluble non-toxic metals such as calcium and iron and also volume and mass reduction

  4. Abiotic and microbial interactions during anaerobic transformations of Fe(II and NOx-

    Directory of Open Access Journals (Sweden)

    Flynn ePicardal

    2012-03-01

    Full Text Available Microbial Fe(II oxidation using NO3- as the terminal electron acceptor (nitrate-dependent Fe(II oxidation; NDFO has been studied for over 15 years. Although there are reports of autotrophic isolates and stable enrichments, many of the bacteria capable of NDFO are known organotrophic NO3- -reducers that require the presence of an organic, primary substrate, e.g., acetate, for significant amounts of Fe(II oxidation. Although the thermodynamics of Fe(II oxidation are favorable when coupled to either NO3- or NO2- reduction, the kinetics of abiotic Fe(II oxidation by NO3- are relatively slow except under special conditions. NDFO is typically studied in batch cultures containing millimolar concentrations of Fe(II, NO3-, and the primary substrate. In such systems, NO2- is often observed to accumulate in culture media during Fe(II oxidation. Compared to NO3-, abiotic reactions of biogenic NO2- and Fe(II are relatively rapid. The kinetics and reaction pathways of Fe(II oxidation by NO2- are strongly affected by medium composition and pH, reactant concentration, and the presence of Fe(II-sorptive surfaces, e.g., Fe(III oxyhydroxides and cellular surfaces. In batch cultures, the combination of abiotic and microbial Fe(II oxidation can alter product distribution and, more importantly, results in the formation of intracellular precipitates and extracellular Fe(III oxyhydroxide encrustations that apparently limit further cell growth and Fe(II oxidation. Unless steps are taken to minimize or account for potential abiotic reactions, results of microbial NDFO studies can be obfuscated by artifacts of the chosen experimental conditions, the use of inappropriate analytical methods, and the resulting uncertainties about the relative importance of abiotic and microbial reactions.In this manuscript, abiotic reactions of NO3- and NO2- with aqueous Fe2+, chelated Fe(II, and solid-phase Fe(II are reviewed along with factors that can influence overall NDFO reac

  5. Anaerobic and aerobic transformation of TNT

    Energy Technology Data Exchange (ETDEWEB)

    Kulpa, C.F. [Univ. of Notre Dame, IN (United States). Dept. of Biological Sciences; Boopathy, R.; Manning, J. [Argonne National Lab., IL (United States). Environmental Research Div.

    1996-12-31

    Most studies on the microbial metabolism of nitroaromatic compounds have used pure cultures of aerobic microorganisms. In many cases, attempts to degrade nitroaromatics under aerobic conditions by pure cultures result in no mineralization and only superficial modifications of the structure. However, mixed culture systems properly operated result in the transformation of 2,4,6-trinitrotoluene (TNT) and in some cases mineralization of TNT occurs. In this paper, the mixed culture system is described with emphasis on intermediates and the characteristics of the aerobic microbial process including the necessity for a co-substrate. The possibility of removing TNT under aerobic/anoxic conditions is described in detail. Another option for the biodegradation of TNT and nitroaromatics is under anaerobic, sulfate reducing conditions. In this instance, the nitroaromatic compounds undergo a series of reductions with the formation of amino compounds. TNT under sulfate reducing conditions is reduced to triaminotoluene presumably by the enzyme nitrite reductase, which is commonly found in many Desulfovibrio spp. The removal of nitro groups from TNT is achieved by a series of reductive reactions with the formation of ammonia and toluene by Desulfovibrio sp. (B strain). These metabolic processes could be applied to other nitroaromatic compounds like nitrobenzene, nitrobenzoic acids, nitrophenols, and aniline. The data supporting the anaerobic transformation of TNT under different growth condition are reviewed in this report.

  6. Microbial transformation of plutonium

    International Nuclear Information System (INIS)

    Analytical results indicate the reaction of Pu and fungal metabolites possibly occurs in the cell and the Pu compounds are then released into the exocellular media. Research has demonstrated that Pu-resistant microorganisms which have the ability to change the chemical form of a highly stable Pu complex can be isolated from soil. Continued research will be directed toward determination of the ability of Pu-resistant soil microbial isolates (maintained in stock cultures) to alter the solubility and mobility of the largely insoluble forms of Pu present in the environment. Since these studies involve a systematic investigation of the major classes of soil organisms, determination of their ability to alter Pu form in soil as well as in vitro and evaluation of the soil and environmental factors influencing their ability to transform Pu, the results should ultimately provide a realistic evaluation of the behavior of Pu in soil and the availability of Pu metabolites to plants

  7. Characterization and Adaptation of Anaerobic Sludge Microbial Communities Exposed to Tetrabromobisphenol A

    Science.gov (United States)

    Lefevre, Emilie; Cooper, Ellen; Stapleton, Heather M.

    2016-01-01

    The increasing occurrence of tetrabromobisphenol A (TBBPA) in the environment is raising questions about its potential ecological and human health impacts. TBBPA is microbially transformed under anaerobic conditions to bisphenol A (BPA). However, little is known about which taxa degrade TBBPA and the adaptation of microbial communities exposed to TBBPA. The objectives of this study were to characterize the effect of TBBPA on microbial community structure during the start-up phase of a bench-scale anaerobic sludge reactor, and identify taxa that may be associated with TBBPA degradation. TBBPA degradation was monitored using LC/MS-MS, and the microbial community was characterized using Ion Torrent sequencing and qPCR. TBBPA was nearly completely transformed to BPA via reductive debromination in 55 days. Anaerobic reactor performance was not negatively affected by the presence of TBBPA and the bulk of the microbial community did not experience significant shifts. Several taxa showed a positive response to TBBPA, suggesting they may be associated with TBBPA degradation. Some of these taxa had been previously identified as dehalogenating bacteria including Dehalococcoides, Desulfovibrio, Propionibacterium, and Methylosinus species, but most had not previously been identified as having dehalogenating capacities. This study is the first to provide in-depth information on the microbial dynamics of anaerobic microbial communities exposed to TBBPA. PMID:27463972

  8. Microbial transformation of uranium in wastes

    International Nuclear Information System (INIS)

    Contamination of soils, water, and sediments by radionuclides and toxic metals from the disposal of uranium processing wastes is a major national concern. Although much is known about the physico- chemical aspects of U, we have little information on the effects of aerobic and anaerobic microbial activities on the mobilization or immobilization of U and other toxic metals in mixed wastes. In order to understand the mechanisms of microbial transformations of uranium, we examined a contaminated pond sediment and a sludge sample from the uranium processing facility at Y-12 Plant, Oak Ridge, TN. The uranium concentration in the sediment and sludge samples was 923 and 3080 ug/g dry wt, respectively. In addition to U, the sediment and sludge samples contained high levels of toxic metals such as Cd, Cr, Cu, Hg, Pb, Ni, and Zn. The association of uranium with the various mineral fractions of the sediment and sludge was determined by selective chemical extraction techniques. Uranium was associated to varying degrees with the exchangeable carbonate, iron oxide, organic, and inert fractions in both samples. Initial results in samples amended with carbon and nitrogen indicate immobilization of U due to enhanced indigenous microbial activity under anaerobic conditions. 23 refs., 4 figs., 5 tabs

  9. Innovative microbial fuel cell for electricity production from anaerobic reactors

    DEFF Research Database (Denmark)

    Min, Booki; Angelidaki, Irini

    2008-01-01

    A submersible microbial fuel cell (SMFC) was developed by immersing an anode electrode and a cathode chamber in an anaerobic reactor. Domestic wastewater was used as the medium and the inoculum in the experiments. The SMFC could successfully generate a stable voltage of 0.428 ± 0.003 V with a fixed...... for electricity production from existing anaerobic reactors or other anaerobic environments such as sediments. The advantage of the SMFC is that no special anaerobic chamber (anode chamber) is needed, as existing anaerobic reactors can be used, where the cathode chamber and anode electrode are immersed....

  10. Microbial Transformations of Actinides and Other Radionuclides

    Energy Technology Data Exchange (ETDEWEB)

    Francis,A.J.; Dodge, C. J.

    2009-01-07

    Microorganisms can affect the stability and mobility of the actinides and other radionuclides released from nuclear fuel cycle and from nuclear fuel reprocessing plants. Under appropriate conditions, microorganisms can alter the chemical speciation, solubility and sorption properties and thus could increase or decrease the concentrations of radionuclides in solution in the environment and the bioavailability. Dissolution or immobilization of radionuclides is brought about by direct enzymatic action or indirect non-enzymatic action of microorganisms. Although the physical, chemical, and geochemical processes affecting dissolution, precipitation, and mobilization of radionuclides have been extensively investigated, we have only limited information on the effects of microbial processes and biochemical mechanisms which affect the stability and mobility of radionuclides. The mechanisms of microbial transformations of the major and minor actinides U, Pu, Cm, Am, Np, the fission products and other radionuclides such as Ra, Tc, I, Cs, Sr, under aerobic and anaerobic conditions in the presence of electron donors and acceptors are reviewed.

  11. Enhanced anaerobic transformations of carbon tetrachloride by soil organic matter

    Energy Technology Data Exchange (ETDEWEB)

    Collins, R.; Picardal, F.

    1999-12-01

    Anaerobic, reductive dehalogenation of carbon tetrachloride (CT) by Shewanella putrefaciens 200 is enhanced by the presence of a high-organic-carbon soil. In microbial incubations without soil, 29% of the initial 3 ppm CT was transformed after 33 h, whereas 64% was transformed after only 18 h when soil was present. In sterile, biomimetic systems using a chemical reductant, 20 mM dithiothreitol, similar results were observed, suggesting that abiotic electron-transfer mediators in the soil were catalyzing the reaction. Destruction of 62% of the soil organic carbon by H{sub 2}O{sub 2} resulted in a soil that was less effective in enhancing CT dechlorination. Following separation of the soil organic matter into three humic fractions, the humic acid (HA) fraction catalyzed the dechlorination reaction to a greater extent than did the fulvic acid (FA) fraction, and both were more effective than the fraction containing humin and inorganic minerals. The results are consistent with a mechanism involving humic functional groups that serve as electron-transfer mediators able to enhance the reductive transformation of CT in the presence of a microbial or chemical reductant. Humic functional group analyses showed that the FA contained more total acidity and carboxylic acidity than did the HA; however, both fractions contained similar amounts of total carbonyl groups and quinone carbonyls. Abiotic, HA-mediated CT transformation was observed regardless of whether dithiothreitol was present or not. At circumneutral pH, HA-mediated CT transformation required the presence of dithiothreitol. At pH 8.7, HA-mediated reductive CT transformation occurred both in the absence or presence of dithiothreitol although the transformation was greater in the presence of a reductant. Trichloromethane (chloroform [CF]) production at pH 8.7 was much lower than at circumneutral pH, and volatile organic compounds other than CF were not detected as products in any case.

  12. ANAEROBIC BIODEGRADATION OF ORGANIC COMPOUNDS IN MICROBIAL FUEL CELLS

    Directory of Open Access Journals (Sweden)

    Samkov A. A.

    2014-09-01

    Full Text Available МF-4SК membrane-based microbial fuel cell (MFC was used for an anaerobic utilization of organic com-pounds of various liquid wastes. During incubation in short circuit mode, decreasing of the COD value on range 30-87 % depending on the type of wastes was detected. The dependence of the microbial fuel cell output power on the value of the external load was determined by a number of structural characteristics of MFC

  13. Microbial community analysis of ambient temperature anaerobic digesters

    Energy Technology Data Exchange (ETDEWEB)

    Ciotola, R. [Ohio State Univ., Columbus, OH (United States). Dept. of Food, Agriculture and Biological Engineering

    2010-07-01

    This paper reported on a study in which designs for Chinese and Indian fixed-dome anaerobic digesters were modified in an effort to produce smaller and more affordable digesters. While these types of systems are common in tropical regions of developing countries, they have not been used in colder climates because of the low biogas yield during the winter months. Although there is evidence that sufficient biogas production can be maintained in colder temperatures through design and operational changes, there is a lack of knowledge about the seasonal changes in the composition of the microbial communities in ambient temperature digesters. More knowledge is needed to design and operate systems for maximum biogas yield in temperate climates. The purpose of this study was to cultivate a microbial community that maximizes biogas production at psychrophilic temperatures. The study was conducted on a 300 gallon experimental anaerobic digester on the campus of Ohio State University. Culture-independent methods were used on weekly samples collected from the digester in order to examine microbial community response to changes in ambient temperature. Microbial community profiles were established using universal bacterial and archaeal primers that targeted the 16S rRNA gene. In addition to the methanogenic archaea, this analysis also targeted some of the other numerically and functionally important microbial taxa in anaerobic digesters, such as hydrolytic, fermentative, acetogenic and sulfate reducing bacteria. According to preliminary results, the composition of the microbial community shifts with changes in seasonal temperature.

  14. MICROBIAL TRANSFORMATIONS OF URANIUM COMPLEXED WITH ORGANIC AND INORGANIC LIGANDS.

    Energy Technology Data Exchange (ETDEWEB)

    FRANCIS,A.J.

    2002-09-15

    Biotransformation of various chemical forms of uranium present in wastes, contaminated soils and materials by microorganisms under different process conditions such as aerobic and anaerobic (denitrifying, iron-reducing, fermentative, and sulfate-reducing) conditions will affect the solubility, bioavailability, and mobility of uranium in the natural environment. Fundamental understanding of the mechanisms of microbial transformations of uranium under a variety of environmental conditions will be useful in developing appropriate remediation and waste management strategies as well as predicting the microbial impacts on the long-term stewardship of contaminated sites.

  15. Anaerobic microbial LCFA degradation in bioreactors

    OpenAIRE

    Sousa, D.Z.; Pereira, M.A.; Alves, J.I.; Smidt, Hauke; Stams, A.J.M.; Alves, M. M.

    2008-01-01

    This paper reviews recent results obtained on long-chain fatty acids (LCFA) anaerobic degradation. Two LCFA were used as model substrates: oleate, a mono-unsaturated LCFA, and palmitate, a saturated LCFA, both abundant in LCFA-rich wastewaters. 16S rRNA gene analysis of sludge samples submitted to continuous oleate- and palmitate-feeding followed by batch degradation of the accumulated LCFA demonstrated that bacterial communities were dominated by members of the Clostridiaceae and Sy...

  16. [Methanogenic destruction of (amino)aromatic compounds by anaerobic microbial communities].

    Science.gov (United States)

    Lin'kova, Iu V; D'iakonova, A T; Gladchenko, M A; Kaliuzhnyĭ, S A; Kotova, I B; Stams, A; Netrusov, A I

    2011-01-01

    Destruction of a number of aromatic substrates by anaerobic microbial communities was studied. Active methanogenic microbial communities decomposing aminoaromatic acids and azo dyes into CH4 and CO2 were isolated. Products of primary conversion were found to be 2-hydroxybenzyl and benzyl alcohols gradually transforming into benzoate. It was shown that isolated microbial communities are capable of converting the initial substrates--benzyl alcohol, benzoate, salicylic acid, and golden yellow azo dye--into biogas without a lag-phase but with different velocities. Aromatic and linear intermediates of biodestruction of aromatic amines by obtained enrichment cultures were determined for the first time. Selective effect of aromatic substrates on a microbial community that was expressed in decrease in diversity and gradual change of dominant morphotypes was revealed. PMID:22232897

  17. Microbial aggregates in anaerobic wastewater treatment.

    Science.gov (United States)

    Kosaric, N; Blaszczyk, R

    1990-01-01

    The phenomenon aggregation of anaerobic bacteria gives an opportunity to speed up the digestion rate during methanogenesis. The aggregates are mainly composed of methanogenic bacteria which convert acetate and H2/CO2 into methane. Other bacteria are also included in the aggregates but their concentration is rather small. The aggregates may also be formed during acetogenesis or even hydrolysis but such aggregates are not stable and disrupt quickly when not fed. A two stage process seems to be suitable when high concentrated solid waste must be treated. Special conditions are necessary to promote aggregate formation from methanogenic bacteria but aggregates once formed are stable without feeding even for a few years. The structure, texture and activity of bacterial aggregates depend on several parameters: (1)--temperature and pH, (2)--wastewater composition and (3)--hydrodynamic conditions within the reactor. The common influence of all these parameters is still rather unknown but some recommendations may be given. Temperature and pH should be maintained in the range which is optimal for methanogenic bacteria e.g. a temperature between 32 and 50 degrees C and a value pH between 6.5 and 7.5. Wastewaters should contain soluble wastes and the specific loading rate should be around one kgCOD(kgVSS)-1 d-1. The concentration of the elements influences aggregate composition and probably structure and texture. At high calcium concentration a change in the colour of the granules has been observed. Research is necessary to investigate the influence of other elements and organic toxicants on maintenance of the aggregates. Hydrodynamic conditions seem to influence the stability of the granules over long time periods. At low liquid stream rates, aggregates may starve and lysis within the aggregates is possible which results in hollowing of aggregates and their floating. At high liquid stream rates the aggregates may be disrupted and washed out of the reactor as a flocculent

  18. Microbial electrochemical monitoring of volatile fatty acids during anaerobic digestion

    DEFF Research Database (Denmark)

    Jin, Xiangdan; Angelidaki, Irini; Zhang, Yifeng

    2016-01-01

    Volatile fatty acid (VFA) concentration is known as an important indicator to control and optimize anaerobic digestion (AD) process. In this study, an innovative VFA biosensor was developed based on the principle of a microbial desalination cell. The correlation between current densities and VFA...... concentrations was firstly evaluated with synthetic digestate. Two linear relationships were observed between current densities and VFA levels from 1 to 30 mM (0.04 to 8.50 mA/m2, R2=0.97) and then from 30 to 200 mM (8.50 to 10.80 mA/m2, R2=0.95). The detection range was much broader than that of other existing...... and reliable measurement of VFA levels during AD and other anaerobic processes....

  19. Microbial degradation of 4-monobrominated diphenyl ether with anaerobic sludge

    International Nuclear Information System (INIS)

    Highlights: ► BDE-3 was degraded with two anaerobes in different rates. ► Glucose addition augment the debromination efficiencies. ► Hydrogen gas was detected and relative microbes were identified. ► Extra-carbon source enhanced degradation partial due to H2-generation bacteria. - Abstract: Polybrominated diphenyl ethers (PBDEs) are widely used flame retardant additives for many plastic and electronic products. Owing to their ubiquitous distribution in the environment, multiple toxicity to humans, and increasing accumulation in the environment, the fate of PBDEs is of serious concern for public safety. In this study, the degradation of 4-monobrominated diphenyl ether (BDE-3) in anaerobic sludge and the effect of carbon source addition were investigated. BDE-3 can be degraded by two different anaerobic sludge samples. The by-products, diphenyl ether (DE) and bromide ions, were monitored, indicating the reaction of debromination within these anaerobic samples. Co-metabolism with glucose facilitated BDE-3 biodegradation in terms of kinetics and efficiency in the Jhongsing sludge. Through the pattern of amplified 16S rRNA gene fragments in denatured gradient gel electrophoresis (DGGE), the composition of the microbial community was analyzed. Most of the predominant microbes were novel species. The fragments enriched in BDE-3-degrading anaerobic sludge samples are presumably Clostridium sp. This enrichment coincides with the H2 gas generation and the facilitation of debromination during the degradation process. Findings of this study provide better understanding of the biodegradation of brominated DEs and can facilitate the prediction of the fate of PBDEs in the environment.

  20. Evaluation on the microbial interactions of anaerobic ammonium oxidizers and heterotrophs in Anammox biofilm

    DEFF Research Database (Denmark)

    Ni, Bing-Jie; Ruscalleda, Mael; Smets, Barth F.

    2012-01-01

    Anaerobic ammonium oxidation (Anammox) is a cost-effective new process to treat high-strength nitrogenous wastewater. In this work, the microbial interactions of anaerobic ammonium oxidizers and heterotrophs through the exchange of soluble microbial products (SMP) in Anammox biofilm and the affec...

  1. Microbial transformations of radionuclides released from nuclear fuel reprocessing plants

    International Nuclear Information System (INIS)

    Microorganisms can affect the stability and mobility of the actinides U, Pu, Cm, Am, Np, and the fission products Tc, I, Cs, Sr, released from nuclear fuel reprocessing plants. Under appropriate conditions, microorganisms can alter the chemical speciation, solubility and sorption properties and thus could increase or decrease the concentrations of radionuclides in solution and the bioavailability. Dissolution or immobilization of radionuclides is brought about by direct enzymatic action or indirect non-enzymatic action of microorganisms. Although the physical, chemical, and geochemical processes affecting dissolution, precipitation, and mobilization of radionuclides have been investigated, we have only limited information on the effects of microbial processes. The mechanisms of microbial transformations of the major and minor actinides and the fission products under aerobic and anaerobic conditions in the presence of electron donors and acceptors are reviewed. (author)

  2. MICROBIAL TRANSFORMATIONS OF RADIONUCLIDES RELEASED FROM NUCLEAR FUEL REPROCESSING PLANTS.

    Energy Technology Data Exchange (ETDEWEB)

    FRANCIS,A.J.

    2006-10-18

    Microorganisms can affect the stability and mobility of the actinides U, Pu, Cm, Am, Np, and the fission products Tc, I, Cs, Sr, released from nuclear fuel reprocessing plants. Under appropriate conditions, microorganisms can alter the chemical speciation, solubility and sorption properties and thus could increase or decrease the concentrations of radionuclides in solution and the bioavailability. Dissolution or immobilization of radionuclides is brought about by direct enzymatic action or indirect non-enzymatic action of microorganisms. Although the physical, chemical, and geochemical processes affecting dissolution, precipitation, and mobilization of radionuclides have been investigated, we have only limited information on the effects of microbial processes. The mechanisms of microbial transformations of the major and minor actinides and the fission products under aerobic and anaerobic conditions in the presence of electron donors and acceptors are reviewed.

  3. Succession of microbial community and enhanced mechanism of a ZVI-based anaerobic granular sludge process treating chloronitrobenzenes wastewater

    Energy Technology Data Exchange (ETDEWEB)

    Zhu, Liang, E-mail: felix79cn@hotmail.com [Department of Environmental Engineering, Zhejiang University, Hangzhou 310058 (China); Zhejiang Province Key Laboratory for Water Pollution Control and Environmental Safety, Hangzhou 310058 (China); Jin, Jie [Department of Environmental Engineering, Zhejiang University, Hangzhou 310058 (China); Lin, Haizhuan [Department of Environmental Engineering, Zhejiang University, Hangzhou 310058 (China); Wenzhou Environmental Protection Design Scientific Institute, Wenzhou 325000 (China); Gao, Kaituo [Department of Environmental Engineering, Zhejiang University, Hangzhou 310058 (China); Xu, Xiangyang, E-mail: xuxy@zju.edu.cn [Department of Environmental Engineering, Zhejiang University, Hangzhou 310058 (China); Zhejiang Province Key Laboratory for Water Pollution Control and Environmental Safety, Hangzhou 310058 (China)

    2015-03-21

    Highlights: • The combined ZVI–UASB process was established for the degradation of chloronitrobenzenes. • There were the better shock resistance and buffering capacity for anaerobic acidification in the combined process. • Novel ZVI-based anaerobic granular sludge (ZVI–AGS) was successfully developed. • Adaptive shift of microbial community was significant in ZVI-based anaerobic granular sludge system. - Abstract: The combined zero-valent iron (ZVI) and upflow anaerobic sludge blanket (UASB) process is established for the treatment of chloronitrobenzenes (ClNBs) wastewater, and the succession of microbial community and its enhanced mechanism are investigated in the study. Results showed that compared with the control UASB (R1), the stable COD removal, ClNBs transformation, and dechlorination occurred in the combined system (R2) when operated at influent COD and 3,4-Dichloronitrobenzene (3,4-DClNB) loading rates of 4200–7700 g m{sup −3} d{sup −1} and 6.0–70.0 g m{sup −3} d{sup −1}, and R2 had the better shock resistance and buffering capacity for the anaerobic acidification. The dechlorination for the intermediate products of p-chloroanaline (p-ClAn) to analine (AN) occurred in R2 reactor after 45 days, whereas it did not occur in R1 after a long-term operation. The novel ZVI-based anaerobic granular sludge (ZVI–AGS) was successfully developed in the combined system, and higher microbial activities including ClNB transformation and H{sub 2}/CH{sub 4} production were achieved simultaneously. The dominant bacteria were closely related to the groups of Megasphaera, Chloroflexi, and Clostridium, and the majority of archaea were correlated with the groups of Methanosarcinalesarchaeon, Methanosaetaconcilii, and Methanothrixsoehngenii, which are capable of reductively dechlorinating PCB, HCB, and TCE in anaerobic niche and EPS secretion.

  4. Succession of microbial community and enhanced mechanism of a ZVI-based anaerobic granular sludge process treating chloronitrobenzenes wastewater

    International Nuclear Information System (INIS)

    Highlights: • The combined ZVI–UASB process was established for the degradation of chloronitrobenzenes. • There were the better shock resistance and buffering capacity for anaerobic acidification in the combined process. • Novel ZVI-based anaerobic granular sludge (ZVI–AGS) was successfully developed. • Adaptive shift of microbial community was significant in ZVI-based anaerobic granular sludge system. - Abstract: The combined zero-valent iron (ZVI) and upflow anaerobic sludge blanket (UASB) process is established for the treatment of chloronitrobenzenes (ClNBs) wastewater, and the succession of microbial community and its enhanced mechanism are investigated in the study. Results showed that compared with the control UASB (R1), the stable COD removal, ClNBs transformation, and dechlorination occurred in the combined system (R2) when operated at influent COD and 3,4-Dichloronitrobenzene (3,4-DClNB) loading rates of 4200–7700 g m−3 d−1 and 6.0–70.0 g m−3 d−1, and R2 had the better shock resistance and buffering capacity for the anaerobic acidification. The dechlorination for the intermediate products of p-chloroanaline (p-ClAn) to analine (AN) occurred in R2 reactor after 45 days, whereas it did not occur in R1 after a long-term operation. The novel ZVI-based anaerobic granular sludge (ZVI–AGS) was successfully developed in the combined system, and higher microbial activities including ClNB transformation and H2/CH4 production were achieved simultaneously. The dominant bacteria were closely related to the groups of Megasphaera, Chloroflexi, and Clostridium, and the majority of archaea were correlated with the groups of Methanosarcinalesarchaeon, Methanosaetaconcilii, and Methanothrixsoehngenii, which are capable of reductively dechlorinating PCB, HCB, and TCE in anaerobic niche and EPS secretion

  5. Biomarkers of Microbial Metabolism for Monitoring in-situ Anaerobic PAH Degradation

    Science.gov (United States)

    Young, L.; Phelps, C.; Battistelli, J.

    2002-12-01

    Monoaromatic and polycyclic aromatic compounds found in petroleum and its products are subject to biodegradation in the absence of oxygen. These anaerobic pathways reveal novel mechanism of microbial transformation through a series of metabolites and intermediates which are unique to the anaerobic degradation process. The presence of these compounds in-situ, then conceptually can serve as indicators that anaerobic degradation is taking place. We have laboratory studies and field samples which support this concept for BTX and PAH compounds. Environments in which these anaerobic degradation processes have been observed include freshwater and estuarine sediments, groundwater from impacted aquifers at a former manufactured gas plant and gasoline station, and a creosote-contaminated aquifer. Analytical protocols were developed to detect nanomolar concentrations from soil slurries and groundwater samples and microcosm studies verified their formation from field samples and use as biomarkers of activity. Recent studies on the mechanisms of anaerobic naphthalene and methylnaphthalene metabolism have identified several unusual compounds that can serve as biomarkers for monitoring in situ PAH biodegradation. For naphthalene these include 2-naphthoic acid (2-NA), tetrahydro-2-naphthoic acid (TH-2-NA), hexahydro-2-naphthoic acid (HH-2-NA) and methylnaphthoic acid (MNA) generated by sulfate-reducing bacteria degrading naphthalene or methylnaphthalene. Groundwater samples were analyzed from wells distributed throughout an anaerobic, creosote-contaminated aquifer and also from a leaking underground storage site. Samples were extracted, derivatized and analyzed by GC/MS. The concentration of 2-NA at each monitoring well was quantified and correlated to the zones of naphthalene contamination. Taken together with measurements of the aquifer's physical characteristics, these biomarker data can be used to describe the extent of naphthalene biodegradation at these site.

  6. Retention and transport of an anaerobic trichloroethene dechlorinating microbial culture in anaerobic porous media.

    Science.gov (United States)

    Zhang, Huixin; Ulrich, Ania C; Liu, Yang

    2015-06-01

    The influence of solution chemistry on microbial transport was examined using the strictly anaerobic trichloroethene (TCE) bioaugmentation culture KB-1(®). A column was employed to determine transport behaviors and deposition kinetics of three distinct functional species in KB-1(®), Dehalococcoides, Geobacter, and Methanomethylovorans, over a range of ionic strengths under a well-controlled anaerobic condition. A quantitative polymerase chain reaction (qPCR) was utilized to enumerate cell concentration and complementary techniques were implemented to evaluate cell surface electrokinetic potentials. Solution chemistry was found to positively affect the deposition rates, which was consistent with calculated Derjaguin-Landau-Verwey-Overbeek (DLVO) interaction energies. Retained microbial profiles showed spatially constant colloid deposition rate coefficients, in agreement with classical colloid filtration theory (CFT). It was interesting to note that the three KB-1(®) species displayed similar transport and retention behaviors under the defined experimental conditions despite their different cell electrokinetic properties. A deeper analysis of cell characteristics showed that factors, such as cell size and shape, concentration, and motility were involved in determining adhesion behavior. PMID:25935560

  7. Temperature affects microbial abundance, activity and interactions in anaerobic digestion.

    Science.gov (United States)

    Lin, Qiang; De Vrieze, Jo; Li, Jiabao; Li, Xiangzhen

    2016-06-01

    Temperature is a major factor determining the performance of the anaerobic digestion process. The microbial abundance, activity and interactional networks were investigated under a temperature gradient from 25°C to 55°C through amplicon sequencing, using 16S ribosomal RNA and 16S rRNA gene-based approaches. Comparative analysis of past accumulative elements presented by 16S rRNA gene-based analysis, and the in-situ conditions presented by 16S rRNA-based analysis, provided new insights concerning the identification of microbial functional roles and interactions. The daily methane production and total biogas production increased with temperature up to 50°C, but decreased at 55°C. Increased methanogenesis and hydrolysis at 50°C were main factors causing higher methane production which was also closely related with more well-defined methanogenic and/or related modules with comprehensive interactions and increased functional orderliness referred to more microorganisms participating in interactions. This research demonstrated the importance of evaluating functional roles and interactions of microbial community. PMID:26970926

  8. Microbial transformation of low-level radioactive waste

    Energy Technology Data Exchange (ETDEWEB)

    Francis, A.J.

    1980-06-01

    Microorganisms play a significant role in the transformation of the radioactive waste and waste forms disposed of at shallow-land burial sites. Microbial degradation products of organic wastes may influence the transport of buried radionuclides by leaching, solubilization, and formation of organoradionuclide complexes. The ability of indigenous microflora of the radioactive waste to degrade the organic compounds under aerobic and anaerobic conditions was examined. Leachate samples were extracted with methylene chloried and analyzed for organic compounds by gas chromatography and mass spectrometry. In general, several of the organic compounds in the leachates were degraded under aerobic conditions. Under anaerobic conditions, the degradation of the organics was very slow, and changes in concentrations of several acidic compounds were observed. Several low-molecular-weight organic acids are formed by breakdown of complex organic materials and are further metabolized by microorganisms; hence these compounds are in a dynamic state, being both synthesized and destroyed. Tributyl phosphate, a compound used in the extraction of metal ions from solutions of reactor products, was not degraded under anaerobic conditions.

  9. Microbial transformation of low-level radioactive waste

    International Nuclear Information System (INIS)

    Microorganisms play a significant role in the transformation of the radioactive waste and waste forms disposed of at shallow-land burial sites. Microbial degradation products of organic wastes may influence the transport of buried radionuclides by leaching, solubilization, and formation of organoradionuclide complexes. The ability of indigenous microflora of the radioactive waste to degrade the organic compounds under aerobic and anaerobic conditions was examined. Leachate samples were extracted with methylene chloried and analyzed for organic compounds by gas chromatography and mass spectrometry. In general, several of the organic compounds in the leachates were degraded under aerobic conditions. Under anaerobic conditions, the degradation of the organics was very slow, and changes in concentrations of several acidic compounds were observed. Several low-molecular-weight organic acids are formed by breakdown of complex organic materials and are further metabolized by microorganisms; hence these compounds are in a dynamic state, being both synthesized and destroyed. Tributyl phosphate, a compound used in the extraction of metal ions from solutions of reactor products, was not degraded under anaerobic conditions

  10. Microbial transformation of synthetic estrogen 17alpha-ethinylestradiol

    Energy Technology Data Exchange (ETDEWEB)

    Cajthaml, Tomas, E-mail: cajthaml@biomed.cas.c [Institute of Microbiology, Academy of Sciences of the Czech Republic, Videnska 1083, CZ-142 20 Prague 4 (Czech Republic); Kresinova, Zdena; Svobodova, Katerina; Sigler, Karel; Rezanka, Tomas [Institute of Microbiology, Academy of Sciences of the Czech Republic, Videnska 1083, CZ-142 20 Prague 4 (Czech Republic)

    2009-12-15

    Natural estrogens such as estrone, 17beta-estradiol, estriol, and the particularly recalcitrant synthetic estrogen 17alpha-ethinylestradiol used as oral contraceptive, accumulate in the environment and may give rise to health problems. The processes participating in their removal from soil, wastewater, water-sediments, groundwater-aquifer material, and wastewater or sewage treatment plant effluents may involve the action of bacterial and microbial consortia, and in some cases fungi and algae. This review discusses the different efficiencies of bacterial degradation of 17alpha-ethinylestradiol under aerobic and anaerobic conditions, the role of sulfate-, nitrate-, and iron-reducing conditions in anaerobic degradation, and the role of sorption. The participation of autotrophic ammonia oxidizing bacteria and heterotrophic bacteria in cometabolic degradation of estrogens, the estrogen-degrading action of ligninolytic fungi and their extracellular enzymes (lignin peroxidase, manganese-dependent peroxidase, versatile peroxidase, laccase), and of algae are discussed in detail. - Current knowledge of 17alpha-ethinylestradiol microbial transformation is summarized.

  11. Microbial transformation and degradation of polychlorinated biphenyls

    International Nuclear Information System (INIS)

    This paper reviews the potential of microorganisms to transform polychlorinated biphenyls (PCBs). In anaerobic environments, higher chlorinated biphenyls can undergo reductive dehalogenation. Meta- and para-chlorines in PCB congeners are more susceptible to dechlorination than ortho-chlorines. Anaerobes catalyzing PCB dechlorination have not been isolated in pure culture but there is strong evidence from enrichment cultures that some Dehalococcoides spp. and other microorganisms within the Chloroflexi phylum can grow by linking the oxidation of H2 to the reductive dechlorination of PCBs. Lower chlorinated biphenyls can be co-metabolized aerobically. Some aerobes can also grow by utilizing PCB congeners containing only one or two chlorines as sole carbon/energy source. An example is the growth of Burkholderia cepacia by transformation of 4-chlorobiphenyl to chlorobenzoates. The latter compounds are susceptible to aerobic mineralization. Higher chlorinated biphenyls therefore are potentially fully biodegradable in a sequence of reductive dechlorination followed by aerobic mineralization of the lower chlorinated products. - Higher chlorinated biphenyls are potentially fully biodegradable in a sequence of anaerobic reductive dechlorination followed by aerobic mineralization of the lower chlorinated products

  12. Microbial transformation of curcumol by Aspergillus niger.

    Science.gov (United States)

    Chen, Li-Xia; Zhang, Hui; Zhao, Qian; Yin, Shi-Yu; Zhang, Zhong; Li, Tian-Xian; Qiu, Feng

    2013-02-01

    Curcumol is a representative index component for the quality control of the essential oil of Curcuma wenyujin Y.H. Chen et C. Ling, an antivirus and anticancer drug in China. Microbial transformation of curcumol (1) by Aspergillus niger AS 3.739 yielded two products. Their structures were elucidated as 3alpha-hydroxycurcumol (2) and 3alpha-(4'-methoxy-succinyloxy)-curcumol (3) by extensive spectroscopic methods including 2D-NMR and HRESI-MS. Among them, 3 is a new compound. Esterification of the substrate with succinic acid is a novel reaction in the field of microbial transformation of natural products. Compound 2, the major transformation product of 1, was a high regio- and stereo-specific hydroxylation product and showed significant antiviral effects. PMID:23513713

  13. Microbial community analysis of anaerobic reactors treating soft drink wastewater.

    Directory of Open Access Journals (Sweden)

    Takashi Narihiro

    Full Text Available The anaerobic packed-bed (AP and hybrid packed-bed (HP reactors containing methanogenic microbial consortia were applied to treat synthetic soft drink wastewater, which contains polyethylene glycol (PEG and fructose as the primary constituents. The AP and HP reactors achieved high COD removal efficiency (>95% after 80 and 33 days of the operation, respectively, and operated stably over 2 years. 16S rRNA gene pyrotag analyses on a total of 25 biofilm samples generated 98,057 reads, which were clustered into 2,882 operational taxonomic units (OTUs. Both AP and HP communities were predominated by Bacteroidetes, Chloroflexi, Firmicutes, and candidate phylum KSB3 that may degrade organic compound in wastewater treatment processes. Other OTUs related to uncharacterized Geobacter and Spirochaetes clades and candidate phylum GN04 were also detected at high abundance; however, their relationship to wastewater treatment has remained unclear. In particular, KSB3, GN04, Bacteroidetes, and Chloroflexi are consistently associated with the organic loading rate (OLR increase to 1.5 g COD/L-d. Interestingly, KSB3 and GN04 dramatically decrease in both reactors after further OLR increase to 2.0 g COD/L-d. These results indicate that OLR strongly influences microbial community composition. This suggests that specific uncultivated taxa may take central roles in COD removal from soft drink wastewater depending on OLR.

  14. Transformation of tetrachloroethene in an upflow anaerobic sludgeblanket reactor

    DEFF Research Database (Denmark)

    Christiansen, N.; Christensen, S.R.; Arvin, E.;

    1997-01-01

    Reductive dechlorination of tetrachloroethene was studied in a mesophilic upflow anaerobic sludge blanket reactor. Operating the reactor in batch mode the dynamic transformation of tetrachloroethene, trichloroethene and dichloroethene (DCE) was monitored. Tetrachloroethene was reductively...... dechlorinated to trichloroethene, which again was dechlorinated at the same rate as DCE was produced. DCE showed a lag period of 40 h before transformation was observed. During normal reactor operation trans-1,2-DCE was the major DCE isomer, followed by cis-1,2-DCE. Small amounts of 1,1-DCE but no vinyl...

  15. EVALUATION OF A TWO-STAGE TREATMENT OF DOMESTIC SEWAGE WITH ANAEROBIC-AEROBIC MICROBIAL FILM

    OpenAIRE

    A.Mesdaghinia

    1986-01-01

    The objective of this research was to study the feasibility of a two stage continuous system employing anaerobic-aerobic microbial film for domestic wastewater treatment and the effect of iron on the behavior of sulfate reducing bacteria in anaerobic metabolism. A bench scale system with an anaerobic filter followed by aerobic fixed units used plastic media and was operated in up flow manner with hydraulic detention times of 6 hours, whereas the aerobic unit utilized diffused aeration. Raw do...

  16. Growing concentrations of phenol increasingly modify microbial communities' dynamics and performances' stability of anaerobic digesters

    OpenAIRE

    Chapleur, O.; Civade, R.; Hoyos, C.; MAZEAS, L; Bouchez, T.

    2013-01-01

    13th World Congress on Anaerobic Digestion : Recovering (bio) Ressources for the World, Santiago de Compostella, ESP, 25-/06/2013 - 28/06/2013 International audience Anaerobic degradation requires a complex network of interacting and competing microorganisms. Waste anaerobic digesters are based on the intensive use of this flora. Consequently, functioning and stability of digesters are directly related to microbial populations' dynamics. The latter may be subject to external disturbance...

  17. Enrichment and characterization of microbial consortia degrading soluble microbial products discharged from anaerobic methanogenic bioreactors.

    Science.gov (United States)

    Kim, Na-Kyung; Oh, Seungdae; Liu, Wen-Tso

    2016-03-01

    Soluble microbial products (SMP) produced in bioprocesses have been known as a main cause to decrease treatment efficiency, lower effluent quality, and promote membrane fouling in water reclamation plants. In this study, biological degradation of SMP using selectively enriched microbial consortia in a down-flow hanging sponge (DHS) reactor was introduced to remove SMP discharged from anaerobic methanogenic reactors. On average, 68.9-87.5% SMP removal was achieved by the enriched microbial consortia in the DHS reactor for >800 days. The influent SMP fed to the DHS reactor exhibited a bimodal molecular weight (MW) distribution with 14-20 kDa and <4 kDa. Between these two types of SMP, the small MW SMP were biodegraded in the upper part of the reactor, together with most of the large MW SMP. Using 16S rRNA gene pyrosequencing technology, the microbial community composition and structure were characterized and correlated with operational factors, such as hydraulic retention time, organic loading rate, and removal of soluble chemical oxygen demand at different depths of the reactor, by performing network and redundancy analyses. The results revealed that Saprospiraceae was strongly correlated to the increasing SMP loading condition, indicating positive co-occurrences with neighboring bacterial populations. Different microbial diversity along with the depth of the reactor implies that stratified microbial communities could participate in the process of SMP degradation. Taken together, these observations indicate that the spatial and temporal variability of the enriched microbial community in the DHS reactor could effectively treat SMP with respect to changes in the operational factors. PMID:26771162

  18. Microbial nitrogen transformation potential in surface run-off leachate from a tropical landfill

    International Nuclear Information System (INIS)

    Highlights: ► Microbial nitrogen transformations can alleviate toxic ammonium discharge. ► Aerobic ammonium oxidation was rate-limiting in Indonesian landfill leachate. ►Organic nitrogen ammonification was most dominant. ► Anaerobic nitrate reduction and ammonium oxidation potential were also high. ► A two-stage aerobic-anaerobic nitrogen removal system needs to be implemented. - Abstract: Ammonium is one of the major toxic compounds and a critical long-term pollutant in landfill leachate. Leachate from the Jatibarang landfill in Semarang, Indonesia, contains ammonium in concentrations ranging from 376 to 929 mg N L−1. The objective of this study was to determine seasonal variation in the potential for organic nitrogen ammonification, aerobic nitrification, anaerobic nitrate reduction and anaerobic ammonium oxidation (anammox) at this landfilling site. Seasonal samples from leachate collection treatment ponds were used as an inoculum to feed synthetic media to determine potential rates of nitrogen transformations. Aerobic ammonium oxidation potential (−1 h−1) was more than a hundred times lower than the anaerobic nitrogen transformation processes and organic nitrogen ammonification, which were of the same order of magnitude. Anaerobic nitrate oxidation did not proceed beyond nitrite; isolates grown with nitrate as electron acceptor did not degrade nitrite further. Effects of season were only observed for aerobic nitrification and anammox, and were relatively minor: rates were up to three times higher in the dry season. To completely remove the excess ammonium from the leachate, we propose a two-stage treatment system to be implemented. Aeration in the first leachate pond would strongly contribute to aerobic ammonium oxidation to nitrate by providing the currently missing oxygen in the anaerobic leachate and allowing for the growth of ammonium oxidisers. In the second pond the remaining ammonium and produced nitrate can be converted by a combination

  19. Microbial Diversity and Characteristics in Anaerobic Environments in KURT Groundwater

    International Nuclear Information System (INIS)

    The Underground Research Tunnel (URT) located in Korea Atomic Energy Research Institute (KAERI), Daejeon, South Korea was recently constructed as an experimental site to study radionuclide transport, biogeochemistry, radionuclide-mineral interactions for the geological disposal of high level nuclear waste. Groundwater sampled from URT was used to examine microbial diversity and to enrich metal reducing bacteria for studying microbe-metal interactions. Genomic analysis indicated that the groundwater contained diverse microorganisms such as metal reducers, metal oxidizers, anaerobic denitrifying bacteria, and bacteria for reductive dechlorination. Metal-reducing bacteria enriched from the groundwater was used to study metal reduction and biomineralization. The metal-reducing bacteria enriched with acetate or lactate as the electron donors showed the bacteria reduced Fe(III)-citrate, Fe(III) oxyhydroxide, Mn(IV) oxide, and Cr(VI) as the electron acceptors. Preliminary study indicated that the enriched bacteria were able to use glucose, lactate, acetate, and hydrogen as electron donors while reducing Fe(III)-citrate or Fe(III) oxyhydroxide as the electron acceptor. The bacteria exhibited diverse mineral precipitation capabilities including the formation of magnetite, siderite, and rhodochrosite. The results indicated that Fe(III)- and metal-reducing communities are present in URT at the KAERI

  20. Effect of Increasing Total Solids Contents on Anaerobic Digestion of Food Waste under Mesophilic Conditions: Performance and Microbial Characteristics Analysis

    OpenAIRE

    Yi, Jing; Dong, Bin; Jin, Jingwei; Dai, Xiaohu

    2014-01-01

    The total solids content of feedstocks affects the performances of anaerobic digestion and the change of total solids content will lead the change of microbial morphology in systems. In order to increase the efficiency of anaerobic digestion, it is necessary to understand the role of the total solids content on the behavior of the microbial communities involved in anaerobic digestion of organic matter from wet to dry technology. The performances of mesophilic anaerobic digestion of food waste...

  1. Comparative investigation on microbial community and electricity generation in aerobic and anaerobic enriched MFCs.

    Science.gov (United States)

    Quan, Xiang-chun; Quan, Yan-ping; Tao, Kun; Jiang, Xiao-man

    2013-01-01

    This study compared the difference in microbial community and power generation capacity of air-cathode MFCs enriched under anode aerobic and anaerobic conditions. Results showed that MFCs successfully started with continuous air inputting to anode chamber. The aerobic enriched MFC produced comparable and even more electricity with the fuels of acetate, glucose and ethanol compared to the anaerobic MFC when returning to anaerobic condition. The two MFCs showed a slightly different microbial community for anode biofilms (a similarity of 77%), but a highly similar microbial community (a similarity of 97%) for anolyte microbes. The anode biofilm of aerobic enriched MFC showed the presence of some specific bacteria closely related to Clostridium sticklandii, Leucobacter komagatae and Microbacterium laevaniformans. The anaerobic enriched MFC found the presence of a large number of yeast Trichosporon sp. This research demonstrates that it is possible to enrich oxygen-tolerant anode respiring bacteria through purposely aeration in anode chamber. PMID:23196248

  2. Transformation and utilization of slowly biodegradable organic matters in biological sewage treatment of anaerobic anoxic oxic systems.

    Science.gov (United States)

    Zhang, Q H; Jin, P K; Ngo, H H; Shi, X; Guo, W S; Yang, S J; Wang, X C; Wang, X; Dzakpasu, M; Yang, W N; Yang, L

    2016-10-01

    This study examined the distribution of carbon sources in two anaerobic anoxic oxic (AAO) sewage treatment plants in Xi'an and investigated the transformation characteristics and utilization potential of slowly biodegradable organic matters (SBOM). Results indicated under anaerobic and aerobic conditions, SBOM could be transformed at a rate of 65% in 8h into more readily biologically utilizable substrates such as volatile fatty acids (VFAs), polysaccharides and proteins. Additionally, non-biodegradable humus-type substances which are difficult to biodegrade and readily accumulate, were also generated. These products could be further hydrolyzed to aldehyde and ketone compounds and then transformed into substances with significant oxygen-containing functional groups and utilized subsequently. The molecular weights of proteinoid substances had a wide distribution and tended to decrease over time. Long hours of microbial reaction increased the proportion of micromolecular substances. This particular increase generated significant bioavailability, which can greatly improve the efficiency of nitrogen removal. PMID:27347798

  3. Growth of microbial mixed cultures under anaerobic, alkaline conditions

    International Nuclear Information System (INIS)

    Cement and concrete are the most important engineered barrier materials in a repository for low- and intermediate-level waste and thus represent the most significant component of the total disposal inventory. Based on the chemical composition of the concrete used in the repository and the groundwater fluxes in the modelled host rock, it is to be expected that the pH in the near vicinity of the repository could exceed a value of 10.5 for more than a million years. The groundwater in the repository environment also has a limited carbon concentration. Since microorganisms will be present in a repository and can even find suitable living conditions within the waste itself, investigations were carried out in order to establish the extent to which microbial activity is possible under the extreme conditions of the repository near-field. For the investigations, alkalophilic cultures were enriched from samples from alkaline habitats and from Valanginian Marl. Anaerobic bacteria with fermentative, sulfate-reducing and methanogenic metabolism were selected. The growth and activity of the mixed cultures were studied under alkaline conditions and the dependence on pH and carbon concentration determined. All the mixed cultures investigated are alkalophilic. The optimum growth range for the cultures is between pH 9.0 and pH 10.0. The activity limit for the fermentative mixed culture is at pH 12, for the sulfate-reducers at pH 11 and for the methanogens at pH 10.5. Given the limited supply of carbon, the mixed cultures can only grow under slightly alkaline conditions. Only the fermentative cultures are capable of surviving with limited carbon supply at pH 13. (author) 24 figs., 18 tabs., 101 refs

  4. Microbial network for waste activated sludge cascade utilization in an integrated system of microbial electrolysis and anaerobic fermentation

    DEFF Research Database (Denmark)

    Liu, Wenzong; He, Zhangwei; Yang, Chunxue;

    2016-01-01

    integrated system of microbial electrolysis cell (MEC) and anaerobic digestion (AD) for waste activated sludge (WAS). Microbial communities in integrated system would build a thorough energetic and metabolic interaction network regarding fermentation communities and electrode respiring communities. The...... Parabacteroides, which showed a delayed contribution to the extracellular electron transport leading to a slow cascade utilization of WAS. Conclusions: Efficient pretreatment could supply more short-chain fatty acids and higher conductivities in the fermentative liquid, which facilitated mass transfer in anodic...

  5. Microbial monoterpene transformations – A review

    Directory of Open Access Journals (Sweden)

    Robert eMarmulla

    2014-07-01

    Full Text Available Isoprene and monoterpenes constitute a significant fraction of new plant biomass. Emission rates into the atmosphere alone are estimated to be over 500 Tg per year. These natural hydrocarbons are mineralized annually in similar quantities. In the atmosphere, abiotic photochemical processes cause lifetimes of minutes to hours. Microorganisms encounter isoprene, monoterpenes and other volatiles of plant origin while living in and on plants, in the soil and in aquatic habitats. Below toxic concentrations, the compounds can serve as carbon and energy source for aerobic and anaerobic microorganisms. Besides these catabolic reactions, transformations may occur as part of detoxification processes. Initial transformations of monoterpenes involve the introduction of functional groups, oxidation reactions and molecular rearrangements catalyzed by various enzymes. Pseudomonas and Rhodococcus strains and members of the genera Castellaniella and Thauera have become model organisms for the elucidation of biochemical pathways. We review here the enzymes and their genes together with microorganisms known for a monoterpene metabolism, with a strong focus on microorganisms that are taxonomically validly described and currently available from culture collections. Metagenomes of microbiomes with a monoterpene-rich diet confirmed the ecological relevance of monoterpene metabolism and raised concerns on the quality of our insights based on the limited biochemical knowledge.

  6. Growing concentrations of phenol increasingly modify microbial communities’ dynamics and performances’ stability of anaerobic digesters

    OpenAIRE

    Chapleur, O.; Civade, R.; Hoyos, C.; MAZEAS, L; Bouchez, T.

    2013-01-01

    Anaerobic degradation requires a complex network of interacting and competing microorganisms. Waste anaerobic digesters are based on the intensive use of this flora. Consequently, functioning and stability of digesters are directly related to microbial populations’ dynamics. The latter may be subject to external disturbances, such as the arrival of micropollutants with waste, causing malfunction of bioprocesses. In this context, we questioned the influence of phenol addition on microbia...

  7. Microbial transformations of natural organic compounds and radionuclides in subsurface environments

    International Nuclear Information System (INIS)

    A major national concern in the subsurface disposal of energy wastes is the contamination of ground and surface waters by waste leachates containing radionuclides, toxic metals, and organic compounds. Microorganisms play an important role in the transformation of organic compounds, radionuclides, and toxic metals present in the waste and affect their mobility in subsurface environments. Microbial processes involved in dissolution, mobilization, and immobilization of toxic metals under aerobic and anaerobic conditions are briefly reviewed. Metal complexing agents and several organic acids produced by microbial action affect mobilization of radionuclides and toxic metals in subsurface environments. Information on the persistence of and biodegradation rates of synthetic as well as microbiologically produced complexing agents is scarce but important in determining the mobility of metal organic complexes in subsoils. Several gaps in knowledge in the area of microbial transformation of naturally occurring organics, radionuclides, and toxic metals have been identified, and further basic research has been suggested. 31 refs., 1 fig., 3 tabs

  8. Correlation between microbial community and granule conductivity in anaerobic bioreactors for brewery wastewater treatment

    DEFF Research Database (Denmark)

    Shrestha, Pravin; Malvankar, Nikhil S.; Werner, Jeffrey;

    2014-01-01

    Prior investigation of an upflow anaerobic sludge blanket (UASB) reactor treating brewery wastes suggested that direct interspecies electron transfer (DIET) significantly contributed to interspecies electron transfer to methanogens. To investigate DIET in granules further, the electrical...... previous studies, which have demonstrated that Geobacter species can donate electrons to methanogens that are typically predominant in anaerobic digesters, suggest that DIET may be a widespread phenomenon in UASB reactors treating brewery wastes....... conductivity and bacterial community composition of granules in fourteen samples from four different UASB reactors treating brewery wastes were investigated. All of the UASB granules were electrically conductive whereas control granules from ANAMMOX (ANaerobic AMMonium OXidation) reactors and microbial...

  9. Microbial transformation of citral by Penicillium sp..

    Science.gov (United States)

    Esmaeili, Akbar; Tavassoli, Afsaneh

    2010-01-01

    Thymol is present in the essential oils from herbs and spices, such as thyme. It is produced by these plant species as a chemical defense against phytopathogenic microorganisms. Therefore, this compound has attracted great attention in food industry, i.e., it has been used as a natural preservative in foods such as cheese to prevent fungal growth. Previous studies concerning the biotransformation of nerol by Penicillium sp. and microbial transformation of citral by sporulated surface cultures method (SSCM) of Penicillium digitatum have been reported. The objective of this research was to study the pathway involved during biotransformation of citral by Penicillium sp. using two methods. The culture preparation was done using different microbial methods and incubation periods to obtain Penicillium for citral biotransformation. The biotransformation products were identified by gas chromatography (GC) and gas chromatography/mass spectroscopy (GC/MS). A comparison of the two methods showed that SSCM was more effective, its major products were thymol (21.5 %), geranial (18.6 %) and nerol (13.7 %). LM produced only one compound — thymol — with a low efficiency. PMID:20842292

  10. Anaerobic-Aerobic Process for Microbial Degradation of Tetrabromobisphenol A

    OpenAIRE

    Ronen, Zeev; Abeliovich, Aharon

    2000-01-01

    Tetrabromobisphenol A (TBBPA) is a flame retardant that is used as an additive during manufacturing of plastic polymers and electronic circuit boards. Little is known about the fate of this compound in the environment. In the current study we investigated biodegradation of TBBPA, as well as 2,4,6-tribromophenol (TBP), in slurry of anaerobic sediment from a wet ephemeral desert stream bed contaminated with chemical industry waste. Anaerobic incubation of the sediment with TBBPA and peptone-try...

  11. EVALUATION OF A TWO-STAGE TREATMENT OF DOMESTIC SEWAGE WITH ANAEROBIC-AEROBIC MICROBIAL FILM

    Directory of Open Access Journals (Sweden)

    A.Mesdaghinia

    1986-08-01

    Full Text Available The objective of this research was to study the feasibility of a two stage continuous system employing anaerobic-aerobic microbial film for domestic wastewater treatment and the effect of iron on the behavior of sulfate reducing bacteria in anaerobic metabolism. A bench scale system with an anaerobic filter followed by aerobic fixed units used plastic media and was operated in up flow manner with hydraulic detention times of 6 hours, whereas the aerobic unit utilized diffused aeration. Raw domestic sewage was fed to the anaerobic unit, and the aerobic unit was fed with the anaerobic unit was fed with the anaerobic effluent. Although, the anaerobic filter did not show a considerable organic removal with domestic sex age it was improved when glucose was added to the influent to increase influent soluble COD. When glucose was added the anaerobic filter removed about 290 mg/1 of influent soluble COD. The aerobic unit produced an excellent effluent with COD, BOD5 and TSS concentrations of 37 mg/1, 9 mg/1 and 10 mg/l respectively. Overall, the system removed 95 percent of influent COD, 97 percent of influent BOD5 and 96 percent of influent TSS.

  12. Key players and team play: anaerobic microbial communities in hydrocarbon-contaminated aquifers.

    Science.gov (United States)

    Kleinsteuber, Sabine; Schleinitz, Kathleen M; Vogt, Carsten

    2012-05-01

    Biodegradation of anthropogenic pollutants in shallow aquifers is an important microbial ecosystem service which is mainly brought about by indigenous anaerobic microorganisms. For the management of contaminated sites, risk assessment and control of natural attenuation, the assessment of in situ biodegradation and the underlying microbial processes is essential. The development of novel molecular methods, "omics" approaches, and high-throughput techniques has revealed new insight into complex microbial communities and their functions in anoxic environmental systems. This review summarizes recent advances in the application of molecular methods to study anaerobic microbial communities in contaminated terrestrial subsurface ecosystems. We focus on current approaches to analyze composition, dynamics, and functional diversity of subsurface communities, to link identity to activity and metabolic function, and to identify the ecophysiological role of not yet cultured microbes and syntrophic consortia. We discuss recent molecular surveys of contaminated sites from an ecological viewpoint regarding degrader ecotypes, abiotic factors shaping anaerobic communities, and biotic interactions underpinning the importance of microbial cooperation for microbial ecosystem services such as contaminant degradation. PMID:22476263

  13. Spatial Variation in Anaerobic Microbial Communities in Wetland Margin Soils

    Science.gov (United States)

    Rich, H.; Kannenberg, S.; Ludwig, S.; Nelson, L. C.; Spawn, S.; Porterfield, J.; Schade, J. D.

    2012-12-01

    Climate change is predicted to increase the severity and frequency of precipitation and drought events, which may result in substantial temporal variation in the size of wetlands. Wetlands are the world's largest natural emitter of methane, a greenhouse gas that is 20 times more effective at trapping heat than carbon dioxide. Changes in the dynamics of wetland size may lead to changes in the extent and timing of inundation of soils in ephemeral margins, which is likely to influence microbes that rely on anoxic conditions. The impact on process rates may depend on the structure of the community of microbes present in the soil, however, the link between microbial structure and patterns in process rates in soils is not well understood. Our goal was to use molecular techniques to compare microorganism communities in two wetlands that differ in the extent and duration of inundation of marginal soils to assess how these communities may change with changes in climate, and the potential consequences for methane production. This will allow us to examine how community composition changes with soil conditions such as moisture content, frequency of drought and abundance of available carbon. The main focus of this project was to determine the presence or absence of acetoclastic (AC) and hydrogenotrophic (HT) methanogens. AC methanogens use acetate as their main substrate, while HT methanogens use Hydrogen and Carbon dioxide. The relative proportion of these pathways depends on soil conditions, such as competition with other anaerobic microbes and the amount of labile carbon, and spatial patterns in the presence of each can give insight into the soil conditions of a wetland site. We sampled soil from three different wetland ponds of varying permanence in the St Olaf Natural Lands in Northfield, Minnesota, and extracted DNA from these soil samples with a MoBio PowerSoil DNA Isolation Kit. With PCR and seven different primer sets, we tested the extracted DNA for the presence of

  14. Effect of continuous oleate addition on microbial communities involved in anaerobic digestion process

    DEFF Research Database (Denmark)

    Baserba, Manel Garrido; Angelidaki, Irini; Karakashev, Dimitar Borisov

    2012-01-01

    In the present study, the microbial diversity in anaerobic reactors, continuously exposed to oleate, added to a manure reactor influent, was investigated. Relative changes in archaeal community were less remarkable in comparison to changes in bacterial community indicating that dominant archaeal...

  15. Biohydrogen Production from Cheese Processing Wastewater by Anaerobic Fermentation Using Mixed Microbial Communities

    Science.gov (United States)

    Hydrogen (H2) production from simulated cheese processing wastewater via anaerobic fermentation was conducted using mixed microbial communities under mesophilic conditions. In batch H2 fermentation experiments H2 yields of 8 and 10 mM/g-COD fed were achieved at food-to-microorganism (F/M) ratios of ...

  16. Organic micropollutants in aerobic and anaerobic membrane bioreactors: Changes in microbial communities and gene expression

    KAUST Repository

    Harb, Moustapha

    2016-07-09

    Organic micro-pollutants (OMPs) are contaminants of emerging concern in wastewater treatment due to the risk of their proliferation into the environment, but their impact on the biological treatment process is not well understood. The purpose of this study is to examine the effects of the presence of OMPs on the core microbial populations of wastewater treatment. Two nanofiltration-coupled membrane bioreactors (aerobic and anaerobic) were subjected to the same operating conditions while treating synthetic municipal wastewater spiked with OMPs. Microbial community dynamics, gene expression levels, and antibiotic resistance genes were analyzed using molecular-based approaches. Results showed that presence of OMPs in the wastewater feed had a clear effect on keystone bacterial populations in both the aerobic and anaerobic sludge while also significantly impacting biodegradation-associated gene expression levels. Finally, multiple antibiotic-type OMPs were found to have higher removal rates in the anaerobic MBR, while associated antibiotic resistance genes were lower.

  17. Organic micropollutants in aerobic and anaerobic membrane bioreactors: Changes in microbial communities and gene expression.

    Science.gov (United States)

    Harb, Moustapha; Wei, Chun-Hai; Wang, Nan; Amy, Gary; Hong, Pei-Ying

    2016-10-01

    Organic micro-pollutants (OMPs) are contaminants of emerging concern in wastewater treatment due to the risk of their proliferation into the environment, but their impact on the biological treatment process is not well understood. The purpose of this study is to examine the effects of the presence of OMPs on the core microbial populations of wastewater treatment. Two nanofiltration-coupled membrane bioreactors (aerobic and anaerobic) were subjected to the same operating conditions while treating synthetic municipal wastewater spiked with OMPs. Microbial community dynamics, gene expression levels, and antibiotic resistance genes were analyzed using molecular-based approaches. Results showed that presence of OMPs in the wastewater feed had a clear effect on keystone bacterial populations in both the aerobic and anaerobic sludge while also significantly impacting biodegradation-associated gene expression levels. Finally, multiple antibiotic-type OMPs were found to have higher removal rates in the anaerobic MBR, while associated antibiotic resistance genes were lower. PMID:27441825

  18. Anaerobic membrane bioreactor modeling in the presence of Soluble Microbial Products (SMP): the Anaerobic Model AM2b

    OpenAIRE

    BENYAHIA, Boumediene; Sari, Tewfik; Cherki, Brahim; Harmand, Jérôme

    2013-01-01

    In this paper, we develop a mathematical model of anaerobic membrane bioreactors (AnMBR) for control design purposes. In particular, we integrate into this model the production and the degradation of Soluble Microbial Products (SMP), which are known to play an important role in the membrane fouling phenomenon. The proposed model, named AM2b, is based on the modification of the AM2 two step model initially proposed in [1]. We present a graph-based approach to determinate its equilibria and dis...

  19. Microbial transformations of actinides in the environment

    International Nuclear Information System (INIS)

    The diversity of microorganisms is still far from understood, although many examples of the microbial biotransformation of stable, pollutant and radioactive elements, involving Bacteria, Archaea and Fungi, are known. In estuarine sediments from the Irish Sea basin, which have been labelled by low level effluent discharges, there is evidence of an annual cycle in Pu solubility, and microcosm experiments have demonstrated both shifts in the bacterial community and changes in Pu solubility as a result of changes in redox conditions. In the laboratory, redox transformation of both U and Pu by Geobacter sulfurreducens has been demonstrated and EXAFS spectroscopy has been used to understand the inability of G. sufurreducens to reduce Np(V). Fungi promote corrosion of metallic U alloy through production of a range of carboxylic acid metabolites, and are capable of translocating the dissolved U before precipitating it externally to the hyphae, as U(VI) phosphate phases. These examples illustrate the far-reaching but complex effects which microorganisms can have on actinide behaviour.

  20. Anaerobic microbial dehalogenation of organohalides-state of the art and remediation strategies.

    Science.gov (United States)

    Nijenhuis, Ivonne; Kuntze, Kevin

    2016-04-01

    Contamination and remediation of groundwater with halogenated organics and understanding of involved microbial reactions still poses a challenge. Over the last years, research in anaerobic microbial dehalogenation has advanced in many aspects providing information about the reaction, physiology of microorganisms as well as approaches to investigate the activity of microorganisms in situ. Recently published crystal structures of reductive dehalogenases (Rdh), heterologous expression systems and advanced analytical, proteomic and stable isotope approaches allow addressing the overall reaction and specific enzymes as well as co-factors involved during anaerobic microbial dehalogenation. In addition to Dehalococcoides spp., Dehalobacter and Dehalogenimonas strains have been recognized as important and versatile organohalide respirers. Together, these provide perspectives for integrated concepts allowing to improve and monitor in situ biodegradation. PMID:26773757

  1. Anaerobic fungi induced changes of microbial communities in biowaste material

    Czech Academy of Sciences Publication Activity Database

    Mrázek, Jakub; Štrosová, Lenka; Procházka, J.; Dolejš, P.; Kopečný, Jan; Fliegerová, Kateřina

    Clermont-Ferrand : INRA, 2012. s. 148-148. [8th INRA-RRI Symposium, Gut Microbiota . 17.06.2012-20.06.2012, Clermont-Ferrand] R&D Projects: GA ČR GPP503/10/P394; GA MZe QI92A286 Institutional research plan: CEZ:AV0Z50450515 Keywords : anaerobic fungi * biowaste material Subject RIV: EH - Ecology, Behaviour https://colloque4.inra.fr/inra_rowett_2012/

  2. Start-up phase of an anaerobic full-scale farm reactor - Appearance of mesophilic anaerobic conditions and establishment of the methanogenic microbial community.

    Science.gov (United States)

    Goux, Xavier; Calusinska, Magdalena; Fossépré, Marie; Benizri, Emile; Delfosse, Philippe

    2016-07-01

    The goal of this study was to investigate how the microbial community structure establishes during the start-up phase of a full-scale farm anaerobic reactor inoculated with stale and cold cattle slurry. The 16S/18S high-throughput amplicon sequencing results showed an increase of the bacterial, archaeal and eukaryotic diversity, evenness and richness during the settlement of the mesophilic anaerobic conditions. When a steady performing digestion process was reached, the microbial diversity, evenness and richness decreased, indicating the establishment of a few dominant microbial populations, best adapted to biogas production. Interestingly, among the environmental parameters, the temperature, alkalinity, free-NH3, total solids and O2 content were found to be the main drivers of microbial dynamics. Interactions between eukaryotes, characterized by a high number of unknown organisms, and the bacterial and archaeal communities were also evidenced, suggesting that eukaryotes might play important roles in the anaerobic digestion process. PMID:27099947

  3. Microbial trophic interactions and mcrA gene expression in monitoring of anaerobic digesters

    Directory of Open Access Journals (Sweden)

    Alejandra eAlvarado

    2014-11-01

    Full Text Available Anaerobic digestion (AD is a biological process where different trophic groups of microorganisms break down biodegradable organic materials in the absence of oxygen. A wide range of anaerobic digestion technologies is being used to convert livestock manure, municipal and industrial wastewaters, and solid organic wastes into biogas. AD gains importance not only because of its relevance in waste treatment but also because of the recovery of carbon in the form of methane, which is a renewable energy and is used to generate electricity and heat. Despite the advances on the engineering and design of new bioreactors for anaerobic digestion, the microbiology component always poses challenges. Microbiology of AD processes is complicated as the efficiency of the process depends on the interactions of various trophic groups involved. Due to the complex interdependence of microbial activities for the functionality of the anaerobic bioreactors, the genetic expression of mcrA, which encodes a key enzyme in methane formation, is proposed as a parameter to monitor the process performance in real time. This review evaluates the current knowledge on microbial groups, their interactions and their relationship to the performance of anaerobic biodigesters with a focus on using mcrA gene expression as a tool to monitor the process.

  4. MICROBIAL TRANSFORMATION OF SELECTED ORGANIC CHEMICALS IN NATURAL AQUATIC SYSTEMS

    Science.gov (United States)

    A method for describing the microbial degradation of xenobiotics through the use of a second-order reaction equation was tested in several water bodies in the United States and Russia. he experiment was aimed at studying the microbial transformation of a herbicide widely used in ...

  5. Microbial dynamics in anaerobic enrichment cultures degrading di-n-butyl phthalic acid ester

    DEFF Research Database (Denmark)

    Trably, Eric; Batstone, Damien J.; Christensen, Nina;

    2008-01-01

    enrichment cultures degrading phthalic acid esters under methanogenic conditions. A selection pressure was applied by adding DBP at 10 and 200 mg L(-1) in semi-continuous anaerobic reactors. The microbial dynamics were monitored using single strand conformation polymorphism (SSCP). While only limited abiotic...... microorganism described previously as an anaerobic benzaldehyde degrader. Within the archaeal community, there was a shift between two different species of the genus Methanosaeta sp., indicating a highly specific impact of DBP or degradation products on archaeal species. RNA-directed probes were designed from...

  6. Microbial electrochemical monitoring of volatile fatty acids during anaerobic digestion

    DEFF Research Database (Denmark)

    Zhang, Yifeng; Jin, Xiangdan; Angelidaki, Irini

    2015-01-01

    Due to increasing environmental concerns of using fossil fuels and decreasing in their reserves, the promotion of renewable energy technologies is crucial. Anaerobic digestion (AD), a well-developed technology converting organic waste into biogas, is gaining increased attention in recent years...... desalination cell, MDC) was built to realize the on-line measuring the concentration of volatile fatty acid (VFA). The correlation between current densities of the biosensor and VFA concentrations was firstly evaluated with synthetic digestate. Two linear relationships were observed between current densities...

  7. A marine microbial consortium apparently mediating anaerobic oxidation of methane

    DEFF Research Database (Denmark)

    Boetius, A.; Ravenschlag, K.; Schubert, CJ;

    2000-01-01

    A large fraction of globally produced methane is converted to CO2 by anaerobic oxidation in marine sediments(1). Strong geochemical evidence for net methane consumption in anoxic sediments is based on methane profiles(2), radiotracer experiments(3) and stable carbon isotope data(4). But the elusive...... evidence for a structured consortium of archaea and sulphate-reducing bacteria, which we identified by fluorescence in situ hybridization using specific 16S rRNA-targeted oligonucleotide probes. In this example of a structured archaeal-bacterial symbiosis, the archaea grow in dense aggregates of about 100...

  8. Submersible microbial desalination cell for simultaneous ammonia recovery and electricity production from anaerobic reactors containing high levels of ammonia

    DEFF Research Database (Denmark)

    Zhang, Yifeng; Angelidaki, Irini

    2015-01-01

    High ammonia concentration in anaerobic reactors can seriously inhibit the anaerobic digestion process. In this study, a submersible microbial desalination cell (SMDC) was developed as an innovative method to lower the ammonia level in a continuous stirred tank reactor (CSTR) by in situ ammonia...

  9. Comparison of various microbial inocula for the efficient anaerobic digestion of Laminaria hyperborea

    OpenAIRE

    Sutherland, Alastair D; Varela, J.

    2014-01-01

    Background: The hydrolysis of seaweed polysaccharides is the rate limiting step in anaerobic digestion (AD) of seaweeds. Seven different microbial inocula and a mixture of these (inoculum 8) were therefore compared in triplicate, each grown over four weeks in static culture for the ability to degrade Laminaria hyperborea seaweed and produce methane through AD. Results: All the inocula could degrade L. hyperborea and produce methane to some extent. However, an inoculum of slurry from a human s...

  10. Autotrophy as a predominant mode of carbon fixation in anaerobic methane-oxidizing microbial communities

    OpenAIRE

    Kellermann, M. Y.; Wegener, G.; Elvert, M; Yoshinaga, M. Y.; Lin, Y.-S.; Holler, T.; Mollar, X. P.; Knittel, K; Hinrichs, K.-U.

    2012-01-01

    The methane-rich, hydrothermally heated sediments of the Guaymas Basin are inhabited by thermophilic microorganisms, including anaerobic methane-oxidizing archaea (mainly ANME-1) and sulfate-reducing bacteria (e.g., HotSeep-1 cluster). We studied the microbial carbon flow in ANME-1/ HotSeep-1 enrichments in stable-isotope–probing experiments with and without methane. The relative incorporation of 13C from either dissolved inorganic carbon or methane into lipids revealed that methane-oxidizing...

  11. Effects of Endogenous Substrates on Adaptation of Anaerobic Microbial Communities to 3-Chlorobenzoate

    OpenAIRE

    Becker, Jennifer G.; Berardesco, Gina; Rittmann, Bruce E.; Stahl, David A

    2006-01-01

    Lengthy adaptation periods in laboratory studies evaluating the potential for contaminant biodegradation in natural or engineered environments may indicate that the native microbial communities are not metabolizing the contaminants in situ. In this study, we characterized the adaptation period preceding the biodegradation of 3-chlorobenzoate in anaerobic communities derived from lake sediment and wastewater sludge digesters. The importance of alternative mechanisms of adaptation of the anaero...

  12. Microbial communities involved in anaerobic degradation of unsaturated or saturated long chain fatty acids

    OpenAIRE

    Sousa, D.Z.; Pereira, M.A.; Stams, A.J.M.; Alves, M. M.; Smidt, H.

    2007-01-01

    Anaerobic long-chain fatty acid (LCFA)-degrading bacteria were identified by combining selective enrichment studies with molecular approaches. Two distinct enrichment cultures growing on unsaturated and saturated LCFAs were obtained by successive transfers in medium containing oleate and palmitate, respectively, as the sole carbon and energy sources. Changes in the microbial composition during enrichment were analyzed by denaturing gradient gel electrophoresis (DGGE) profiling of PCR...

  13. Anaerobic microbial processes in a petroleum plume in fractured rock, northern Canada

    International Nuclear Information System (INIS)

    Fuel plumes are among the most common groundwater pollution problems at polluted sites throughout Canada, including the Canadian Shield region. However, the microbial processes that occur under cold climate conditions in fuel-contaminated groundwater are poorly understood. This study focused on evidence for anaerobic microbial processes in fuel plumes in groundwater at a Canadian Shield site in the Northwest Territories, within a zone mapped as having extensive discontinuous permafrost. In particular, the study examined redox-sensitive species in the groundwater, specifically iron, manganese, sulfate and nitrate. The data reported in the paper were based on a sampling program conducted in September 2007. The data showed strong evidence that anaerobic microorganisms are active in fuel-contaminated groundwater in fractured rock at the study site. The microbial processes include the reduction of electron acceptors, notably sulfate, ferric iron, manganese and possibly nitrate. It is possible that such anaerobic processes play an important role in the biodegradation of dissolved petroleum hydrocarbons in the groundwater at this site. However, it was concluded that additional analysis is needed in order to infer rates of these processes in the groundwater and to understand the relationship of these processes to degradation of the fuel plume. 14 refs., 8 figs.

  14. Microbial sequencing methods for monitoring of anaerobic treatment of antibiotics to optimize performance and prevent system failure.

    Science.gov (United States)

    Aydin, Sevcan

    2016-06-01

    As a result of developments in molecular technologies and the use of sequencing technologies, the analyses of the anaerobic microbial community in biological treatment process has become increasingly prevalent. This review examines the ways in which microbial sequencing methods can be applied to achieve an extensive understanding of the phylogenetic and functional characteristics of microbial assemblages in anaerobic reactor if the substrate is contaminated by antibiotics which is one of the most important toxic compounds. It will discuss some of the advantages and disadvantages associated with microbial sequencing techniques that are more commonly employed and will assess how a combination of the existing methods may be applied to develop a more comprehensive understanding of microbial communities and improve the validity and depth of the results for the enhancement of the stability of anaerobic reactors. PMID:27138203

  15. Spectral induced polarization and electrodic potential monitoring of microbially mediated iron sulfide transformations

    Energy Technology Data Exchange (ETDEWEB)

    Hubbard, Susan; Personna, Y.R.; Ntarlagiannis, D.; Slater, L.; Yee, N.; O' Brien, M.; Hubbard, S.

    2008-02-15

    Stimulated sulfate-reduction is a bioremediation technique utilized for the sequestration of heavy metals in the subsurface.We performed laboratory column experiments to investigate the geoelectrical response of iron sulfide transformations by Desulfo vibriovulgaris. Two geoelectrical methods, (1) spectral induced polarization (SIP), and (2) electrodic potential measurements, were investigated. Aqueous geochemistry (sulfate, lactate, sulfide, and acetate), observations of precipitates (identified from electron microscopy as iron sulfide), and electrodic potentials on bisulfide ion (HS) sensitive silver-silver chloride (Ag-AgCl) electrodes (630 mV) were diagnostic of induced transitions between an aerobic iron sulfide forming conditions and aerobic conditions promoting iron sulfide dissolution. The SIP data showed 10m rad anomalies during iron sulfide mineralization accompanying microbial activity under an anaerobic transition. These anomalies disappeared during iron sulfide dissolution under the subsequent aerobic transition. SIP model parameters based on a Cole-Cole relaxation model of the polarization at the mineral-fluid interface were converted to (1) estimated biomineral surface area to pore volume (Sp), and (2) an equivalent polarizable sphere diameter (d) controlling the relaxation time. The temporal variation in these model parameters is consistent with filling and emptying of pores by iron sulfide biofilms, as the system transitions between anaerobic (pore filling) and aerobic (pore emptying) conditions. The results suggest that combined SIP and electrodic potential measurements might be used to monitor spatiotemporal variability in microbial iron sulfide transformations in the field.

  16. Selenite Reduction by Anaerobic Microbial Aggregates: Microbial Community Structure, and Proteins Associated to the Produced Selenium Spheres

    KAUST Repository

    Gonzalez-Gil, Graciela

    2016-04-26

    Certain types of anaerobic granular sludge, which consists of microbial aggregates, can reduce selenium oxyanions. To envisage strategies for removing those oxyanions from wastewater and recovering the produced elemental selenium (Se0), insights into the microbial community structure and synthesis of Se0 within these microbial aggregates are required. High-throughput sequencing showed that Veillonellaceae (c.a. 20%) and Pseudomonadaceae (c.a.10%) were the most abundant microbial phylotypes in selenite reducing microbial aggregates. The majority of the Pseudomonadaceae sequences were affiliated to the genus Pseudomonas. A distinct outer layer (∼200 μm) of selenium deposits indicated that bioreduction occurred in the outer zone of the microbial aggregates. In that outer layer, SEM analysis showed abundant intracellular and extracellular Se0 (nano)spheres, with some cells having high numbers of intracellular Se0 spheres. Electron tomography showed that microbial cells can harbor a single large intracellular sphere that stretches the cell body. The Se0 spheres produced by the microorganisms were capped with organic material. X-ray photoelectron spectroscopy (XPS) analysis of extracted Se0 spheres, combined with a mathematical approach to analyzing XPS spectra from biological origin, indicated that proteins and lipids were components of the capping material associated to the Se0 spheres. The most abundant proteins associated to the spheres were identified by proteomic analysis. Most of the proteins or peptide sequences capping the Se0 spheres were identified as periplasmic outer membrane porins and as the cytoplasmic elongation factor Tu protein, suggesting an intracellular formation of the Se0 spheres. In view of these and previous findings, a schematic model for the synthesis of Se0 spheres by the microorganisms inhabiting the granular sludge is proposed.

  17. Selenite Reduction by Anaerobic Microbial Aggregates: Microbial Community Structure, and Proteins Associated to the Produced Selenium Spheres

    Science.gov (United States)

    Gonzalez-Gil, Graciela; Lens, Piet N. L.; Saikaly, Pascal E.

    2016-01-01

    Certain types of anaerobic granular sludge, which consists of microbial aggregates, can reduce selenium oxyanions. To envisage strategies for removing those oxyanions from wastewater and recovering the produced elemental selenium (Se0), insights into the microbial community structure and synthesis of Se0 within these microbial aggregates are required. High-throughput sequencing showed that Veillonellaceae (c.a. 20%) and Pseudomonadaceae (c.a.10%) were the most abundant microbial phylotypes in selenite reducing microbial aggregates. The majority of the Pseudomonadaceae sequences were affiliated to the genus Pseudomonas. A distinct outer layer (∼200 μm) of selenium deposits indicated that bioreduction occurred in the outer zone of the microbial aggregates. In that outer layer, SEM analysis showed abundant intracellular and extracellular Se0 (nano)spheres, with some cells having high numbers of intracellular Se0 spheres. Electron tomography showed that microbial cells can harbor a single large intracellular sphere that stretches the cell body. The Se0 spheres produced by the microorganisms were capped with organic material. X-ray photoelectron spectroscopy (XPS) analysis of extracted Se0 spheres, combined with a mathematical approach to analyzing XPS spectra from biological origin, indicated that proteins and lipids were components of the capping material associated to the Se0 spheres. The most abundant proteins associated to the spheres were identified by proteomic analysis. Most of the proteins or peptide sequences capping the Se0 spheres were identified as periplasmic outer membrane porins and as the cytoplasmic elongation factor Tu protein, suggesting an intracellular formation of the Se0 spheres. In view of these and previous findings, a schematic model for the synthesis of Se0 spheres by the microorganisms inhabiting the granular sludge is proposed. PMID:27199909

  18. Regularities of polymer substances transformation into methane by thermophilic anaerobic bacteria

    OpenAIRE

    V. І. Karpenko; L. S. Yastremska; І. G. Burun; Y. V. Lembey; O. S. Tatarchenko

    2006-01-01

    The paper shows the regularities of polymer substances transformation into methane by extracted thermophilic anaerobic bacteria. The sequence of substrate use by the methane generating bacteria corresponds to the energy efficiency of the methane genesis reactions as in the first place hydrogen is used and then acetate is. Combined cultivation of extracted different anaerobic cultures gives the opportunity to increase ethanol and hydrogen yield as well as the effectiveness of methane formation.

  19. Polychlorinated biphenyl (PCB) anaerobic degradation in marine sediments: microcosm study and role of autochthonous microbial communities.

    Science.gov (United States)

    Matturro, Bruna; Ubaldi, Carla; Grenni, Paola; Caracciolo, Anna Barra; Rossetti, Simona

    2016-07-01

    Polychlorobiphenyl (PCB) biodegradation was followed for 1 year in microcosms containing marine sediments collected from Mar Piccolo (Taranto, Italy) chronically contaminated by this class of hazardous compounds. The microcosms were performed under strictly anaerobic conditions with or without the addition of Dehalococcoides mccartyi, the main microorganism known to degrade PCBs through the anaerobic reductive dechlorination process. Thirty PCB congeners were monitored during the experiments revealing that the biodegradation occurred in all microcosms with a decrease in hepta-, hexa-, and penta-chlorobiphenyls (CBs) and a parallel increase in low chlorinated PCBs (tri-CBs and tetra-CBs). The concentrations of the most representative congeners detected in the original sediment, such as 245-245-CB and 2345-245-CB, and of the mixture 2356-34-CB+234-245-CB, decreased by 32.5, 23.8, and 46.7 %, respectively, after only 70 days of anaerobic incubation without any bioaugmentation treatment. Additionally, the structure and population dynamics of the microbial key players involved in the biodegradative process and of the entire mixed microbial community were accurately defined by Catalyzed Reporter Deposition Fluorescence In Situ Hybridization (CARD-FISH) in both the original sediment and during the operation of the microcosm. The reductive dehalogenase genes of D. mccartyi, specifically involved in PCB dechlorination, were also quantified using real-time PCR (qPCR). Our results demonstrated that the autochthonous microbial community living in the marine sediment, including D. mccartyi (6.32E+06 16S rRNA gene copy numbers g(-1) sediment), was able to efficiently sustain the biodegradation of PCBs when controlled anaerobic conditions were imposed. PMID:26162439

  20. Innovative self-powered submersible microbial electrolysis cell (SMEC) for biohydrogen production from anaerobic reactors

    DEFF Research Database (Denmark)

    Zhang, Yifeng; Angelidaki, Irini

    2012-01-01

    A self-powered submersible microbial electrolysis cell (SMEC), in which a specially designed anode chamber and external electricity supply were not needed, was developed for in situ biohydrogen production from anaerobic reactors. In batch experiments, the hydrogen production rate reached 17.8 m...... and buffer concentration. The highest hydrogen production rate of 32.2 mL/L/d and YH2 of 1.43 mol-H2/mol-acetate were achieved at 1640 mg/L (20 mM) acetate and 100 mM phosphate buffer. Further evaluation of the reactor under single electricity-generating or hydrogen-producing mode indicated that further....... Furthermore, 16S rRNA genes analysis showed that this special operation strategy resulted same microbial community structures in the anodic biofilms of the two cell units. The simple, compact and in situ applicable SMEC offers new opportunities for reactor design for a microbial electricity...

  1. Metabolomics reveals stage-specific metabolic pathways of microbial communities in two-stage anaerobic fermentation of corn-stalk.

    Science.gov (United States)

    Yang, Dawei; Fan, Xiaolei; Shi, Xiaoshuang; Lian, Shujuan; Qiao, Jiangtao; Guo, Rongbo

    2014-07-01

    Analysis of intracellular metabolites is essential to delineate metabolic pathways of microbial communities for evaluation and optimization of anaerobic fermentation processes. The metabolomics are reported for a microbial community during two stages of anaerobic fermentation of corn stalk in a biogas digester using GC–MS. Acetonitrile/methanol/water (2:2:1, by vol) was the best extraction solvent for microbial community analysis because it yielded the largest number of peaks (>200), the highest mean summed value of identified metabolites (23) and the best reproducibility with a coefficient of variation of 30 % among four different extraction methods. Inter-stage comparison of metabolite profiles showed increased levels of sugars and sugar alcohols during methanogenesis and fatty acids during acidogenesis. Identification of stage-specific metabolic pathways using metabolomics can therefore assist in monitoring and optimization of the microbial community for increased biogas production during anaerobic fermentation. PMID:24658741

  2. Microbial Transformation of Quercetin by Bacillus cereus

    OpenAIRE

    Rao, Koppaka V.; Weisner, Nghe T.

    1981-01-01

    Biotransformation of quercetin was examined with a number of bacterial cultures. In the presence of a bacterial culture (Bacillus cereus), quercetin was transformed into two crystalline products, identified as protocatechuic acid and quercetin-3-glucoside (isoquercitrin).

  3. Improving the cyanide toxicity tolerance of anaerobic reactor: Microbial interactions and toxin reduction.

    Science.gov (United States)

    Gupta, Pragya; Ahammad, S Z; Sreekrishnan, T R

    2016-09-01

    Anaerobic biological treatment of high organics containing wastewater is amongst the preferred treatment options but poor tolerance to toxins makes its use prohibitive. In this study, efforts have been made to understand the key parameters for developing anaerobic reactor, resilient to cyanide toxicity. A laboratory scale anaerobic batch reactor was set up to treat cyanide containing wastewater. The reactor was inoculated with anaerobic sludge obtained from a wastewater treatment plant and fresh cow dung in the ratio of 3:1. The focus was on acclimatization and development of cyanide-degrading biomass and to understand the toxic effects of cyanide on the dynamic equilibrium between various microbial groups. The sludge exposed to cyanide was found to have higher bacterial diversity than the control. It was observed that certain hydrogenotrophic methanogens and bacterial groups were able to grow and produce methane in the presence of cyanide. Also, it was found that hydrogen utilizing methanogens were more cyanide tolerant than acetate utilizing methanogens. So, effluents from various industries like electroplating, coke oven plant, petroleum refining, explosive manufacturing, and pesticides industries which are having high concentrations of cyanide can be treated by favoring the growth of the tolerant microbes in the reactors. It will provide much better treatment efficiency by overcoming the inhibitory effects of cyanide to certain extent. PMID:27179200

  4. Removal of anaerobic soluble microbial products in a biological activated carbon reactor.

    Science.gov (United States)

    Dong, Xiaojing; Zhou, Weili; He, Shengbing

    2013-09-01

    The soluble microbial products (SMP) in the biological treatment effluent are generally of great amount and are poorly biodegradable. Focusing on the biodegradation of anaerobic SMP, the biological activated carbon (BAC) was introduced into the anaerobic system. The experiments were conducted in two identical lab-scale up-flow anaerobic sludge blanket (UASB) reactors. The high strength organics were degraded in the first UASB reactor (UASB1) and the second UASB (UASB2, i.e., BAC) functioned as a polishing step to remove SMP produced in UASB1. The results showed that 90% of the SMP could be removed before granular activated carbon was saturated. After the saturation, the SMP removal decreased to 60% on the average. Analysis of granular activated carbon adsorption revealed that the main role of SMP removal in BAC reactor was biodegradation. A strain of SMP-degrading bacteria, which was found highly similar to Klebsiella sp., was isolated, enriched and inoculated back to the BAC reactor. When the influent chemical oxygen demand (COD) was 10,000 mg/L and the organic loading rate achieved 10 kg COD/(m3 x day), the effluent from the BAC reactor could meet the discharge standard without further treatment. Anaerobic BAC reactor inoculated with the isolated Klebsiella was proved to be an effective, cheap and easy technical treatment approach for the removal of SMP in the treatment of easily-degradable wastewater with COD lower than 10,000 mg/L. PMID:24520716

  5. Effect of increasing total solids contents on anaerobic digestion of food waste under mesophilic conditions: performance and microbial characteristics analysis.

    Directory of Open Access Journals (Sweden)

    Jing Yi

    Full Text Available The total solids content of feedstocks affects the performances of anaerobic digestion and the change of total solids content will lead the change of microbial morphology in systems. In order to increase the efficiency of anaerobic digestion, it is necessary to understand the role of the total solids content on the behavior of the microbial communities involved in anaerobic digestion of organic matter from wet to dry technology. The performances of mesophilic anaerobic digestion of food waste with different total solids contents from 5% to 20% were compared and the microbial communities in reactors were investigated using 454 pyrosequencing technology. Three stable anaerobic digestion processes were achieved for food waste biodegradation and methane generation. Better performances mainly including volatile solids reduction and methane yield were obtained in the reactors with higher total solids content. Pyrosequencing results revealed significant shifts in bacterial community with increasing total solids contents. The proportion of phylum Chloroflexi decreased obviously with increasing total solids contents while other functional bacteria showed increasing trend. Methanosarcina absolutely dominated in archaeal communities in three reactors and the relative abundance of this group showed increasing trend with increasing total solids contents. These results revealed the effects of the total solids content on the performance parameters and the behavior of the microbial communities involved in the anaerobic digestion of food waste from wet to dry technologies.

  6. Microbial diversity in an anaerobic digester with biogeographical proximity to geothermally active region.

    Science.gov (United States)

    Mahajan, Rishi; Nikitina, Anna; Nozhevnikova, Alla; Goel, Gunjan

    2016-11-01

    Anaerobic digestion of agricultural biomass or wastes can offer renewable energy, to help meet the rise in energy demands. The performance of an anaerobic digester considerably depends upon the complex interactions between bacterial and archaeal microbiome, which is greatly influenced by environmental factors. In the present study, we evaluate a microbial community of digester located at two different geographical locations, to understand whether the biogeographical proximity of a digester to a geothermally active region has any influence on microbial composition. The comparative microbial community profiling, highlights coexistence of specific bacterial and archaeal representatives (especially, Prosthecochloris sp., Conexibacter sp., Crenarchaeota isolate (Caldivirga sp.), Metallosphaera sp., Pyrobaculum sp. and Acidianus sp.) in a digester with close proximity to geothermally active region (Site I) and their absence in a digester located far-off from geothermally active region (Site II). A Sörensen's index of similarity of 83.33% and 66.66% for bacterial and archaeal community was observed in both the reactors, respectively. PMID:26934210

  7. Increasing concentrations of phenol progressively affect anaerobic digestion of cellulose and associated microbial communities.

    Science.gov (United States)

    Chapleur, Olivier; Madigou, Céline; Civade, Raphaël; Rodolphe, Yohan; Mazéas, Laurent; Bouchez, Théodore

    2016-02-01

    Performance stability is a key issue when managing anaerobic digesters. However it can be affected by external disturbances caused by micropollutants. In this study the influence of phenol on the methanization of cellulose was evaluated through batch toxicity assays. Special attention was given to the dynamics of microbial communities by means of automated ribosomal intergenic spacer analysis. We observed that, as phenol concentrations increased, the different steps of anaerobic cellulose digestion were unevenly and progressively affected, methanogenesis being the most sensitive: specific methanogenic activity was half-inhibited at 1.40 g/L of phenol, whereas hydrolysis of cellulose and its fermentation to VFA were observed at up to 2.00 g/L. Depending on the level of phenol, microbial communities resisted either through physiological or structural adaptation. Thus, performances at 0.50 g/L were maintained in spite of the microbial community's shift. However, the communities' ability to adapt was limited and performances decreased drastically beyond 2.00 g/L of phenol. PMID:26614490

  8. Thermodynamics-based design of microbial cell factories for anaerobic product formation.

    Science.gov (United States)

    Cueto-Rojas, Hugo F; van Maris, A J A; Wahl, S Aljoscha; Heijnen, J J

    2015-09-01

    The field of metabolic engineering has delivered new microbial cell factories and processes for the production of different compounds including biofuels, (di)carboxylic acids, alcohols, and amino acids. Most of these processes are aerobic, with few exceptions (e.g., alcoholic fermentation), and attention is focused on assembling a high-flux product pathway with a production limit usually set by the oxygen transfer rate. By contrast, anaerobic product synthesis offers significant benefits compared to aerobic systems: higher yields, less heat generation, reduced biomass production, and lower mechanical energy input, which can significantly reduce production costs. Using simple thermodynamic calculations, we demonstrate that many products can theoretically be produced under anaerobic conditions using several conventional and non-conventional substrates. PMID:26232033

  9. Temperature regulates methane production through the function centralization of microbial community in anaerobic digestion.

    Science.gov (United States)

    Lin, Qiang; De Vrieze, Jo; He, Guihua; Li, Xiangzhen; Li, Jiabao

    2016-09-01

    Temperature is crucial for the performance of anaerobic digestion process. In this study of anaerobic digestion of swine manure, the relationship between the microbial gene expression and methane production at different temperatures (25-55°C) was revealed through metatranscriptomic analysis. Daily methane production and total biogas production increased with temperature up to 50°C, but decreased at 55°C. The functional gene expression showed great variation at different temperatures. The function centralization (opposite to alpha-diversity), assessed by the least proportions of functional pathways contributing for at least 50% of total reads positively correlated to methane production. Temperature regulated methane production probably through reducing the diversity of functional pathways, but enhancing central functional pathways, so that most of cellular activities and resource were invested in methanogenesis and related pathways, enhancing the efficiency of conversion of substrates to methane. This research demonstrated the importance of function centralization for efficient system functioning. PMID:27236402

  10. Effect of oxygen on the microbial activities of thermophilic anaerobic biomass.

    Science.gov (United States)

    Pedizzi, C; Regueiro, L; Rodriguez-Verde, I; Lema, J M; Carballa, M

    2016-07-01

    Low oxygen levels (μgO2L(-1)) in anaerobic reactors are quite common and no relevant consequences are expected. On the contrary, higher concentrations could affect the process. This work aimed to study the influence of oxygen (4.3 and 8.8mgO2L(-1), respectively) on the different microbial activities (hydrolytic, acidogenic and methanogenic) of thermophilic anaerobic biomass and on the methanogenic community structure. Batch tests in presence of oxygen were conducted using specific substrates for each biological activity and a blank (with minimum oxygen) was included. No effect of oxygen was observed on the hydrolytic and acidogenic activities. In contrast, the methane production rate decreased by 40% in all oxygenated batches and the development of active archaeal community was slower in presence of 8.8mgO2L(-1). However, despite this sensitivity of methanogens to oxygen at saturation levels, the inhibition was reversible. PMID:27020398

  11. Counteracting ammonia inhibition during anaerobic digestion by recovery using submersible microbial desalination cell

    DEFF Research Database (Denmark)

    Zhang, Yifeng; Angelidaki, Irini

    2015-01-01

    Ammonia inhibition is one of the most frequent and serious problems in biogas plants. In this study, a novel hybrid system consisting of a submersible microbial desalination cell (SMDC) and a continuous stirred tank reactor (CSTR) was developed for counteracting ammonia inhibition during anaerobic...... digestion (AD) with simultaneous in situ ammonia recovery and electricity production. The SMDC was powered by acetate in a buffer solution, while synthetic ammonia-rich wastewater was used as the feeding of the CSTR. Under continuous operation, ammonia recovery rate of 86 g-N/m2 /day and current density...

  12. Anaerobic Microbial Degradation of Hydrocarbons: From Enzymatic Reactions to the Environment.

    Science.gov (United States)

    Rabus, Ralf; Boll, Matthias; Heider, Johann; Meckenstock, Rainer U; Buckel, Wolfgang; Einsle, Oliver; Ermler, Ulrich; Golding, Bernard T; Gunsalus, Robert P; Kroneck, Peter M H; Krüger, Martin; Lueders, Tillmann; Martins, Berta M; Musat, Florin; Richnow, Hans H; Schink, Bernhard; Seifert, Jana; Szaleniec, Maciej; Treude, Tina; Ullmann, G Matthias; Vogt, Carsten; von Bergen, Martin; Wilkes, Heinz

    2016-01-01

    Hydrocarbons are abundant in anoxic environments and pose biochemical challenges to their anaerobic degradation by microorganisms. Within the framework of the Priority Program 1319, investigations funded by the Deutsche Forschungsgemeinschaft on the anaerobic microbial degradation of hydrocarbons ranged from isolation and enrichment of hitherto unknown hydrocarbon-degrading anaerobic microorganisms, discovery of novel reactions, detailed studies of enzyme mechanisms and structures to process-oriented in situ studies. Selected highlights from this program are collected in this synopsis, with more detailed information provided by theme-focused reviews of the special topic issue on 'Anaerobic biodegradation of hydrocarbons' [this issue, pp. 1-244]. The interdisciplinary character of the program, involving microbiologists, biochemists, organic chemists and environmental scientists, is best exemplified by the studies on alkyl-/arylalkylsuccinate synthases. Here, research topics ranged from in-depth mechanistic studies of archetypical toluene-activating benzylsuccinate synthase, substrate-specific phylogenetic clustering of alkyl-/arylalkylsuccinate synthases (toluene plus xylenes, p-cymene, p-cresol, 2-methylnaphthalene, n-alkanes), stereochemical and co-metabolic insights into n-alkane-activating (methylalkyl)succinate synthases to the discovery of bacterial groups previously unknown to possess alkyl-/arylalkylsuccinate synthases by means of functional gene markers and in situ field studies enabled by state-of-the-art stable isotope probing and fractionation approaches. Other topics are Mo-cofactor-dependent dehydrogenases performing O2-independent hydroxylation of hydrocarbons and alkyl side chains (ethylbenzene, p-cymene, cholesterol, n-hexadecane), degradation of p-alkylated benzoates and toluenes, glycyl radical-bearing 4-hydroxyphenylacetate decarboxylase, novel types of carboxylation reactions (for acetophenone, acetone, and potentially also benzene and

  13. Transforming anaerobic digestion with the Model T of digesters

    Energy Technology Data Exchange (ETDEWEB)

    Martin, J.F.; Ciotola, R.; Castano, J.; Eger, C.; Schlea, D. [Ohio State Univ., Columbus, OH (United States). Ecological Engineering Program

    2010-07-01

    Most livestock farmers in the United States do not take advantage of anaerobic digester technology because of the high cost and large scale. These limitations therefore reduce the production of renewable energy from farmlands. In order to expand anaerobic digestion methods and improve environmental quality, affordable and smaller-scale digesters should be developed to enable most livestock farmers to convert manure to methane. Doing so would improve their economic efficiency and environmental sustainability. This paper provided an analogy to the development of the Model T to better explain the need and potential for this technology. A modified fixed-dome digester was installed on the Ohio State University dairy in Columbus, Ohio. The digester was unheated, buried, had a volume of 1 m{sup 3} and received diluted dairy manure as feedstock. Biogas was produced at digester temperatures as low 10 degrees C during colder ambient temperatures. Water quality also improved. Results from the first year of operation will be analyzed to improve performance and enable future development of this technology.

  14. Enhancing anaerobic digestion of cotton stalk by pretreatment with a microbial consortium (MC1).

    Science.gov (United States)

    Yuan, Xufeng; Ma, Lei; Wen, Boting; Zhou, Dayun; Kuang, Meng; Yang, Weihua; Cui, Zongjun

    2016-05-01

    Microbial pretreatment is beneficial in some anaerobic digestion systems, but the consortia used to date have not been able to effectively increase methane production from cotton stalk. In this study, a thermophilic microbial consortium (MC1) was used for pretreatment in order to enhance biogas and methane production yields. The results indicated that the concentrations of soluble chemical oxygen demand and volatile organic products increased significantly in the early stages of pretreatment. Ethanol, acetic acid, propionic acid, and butyric acid were the predominant volatile organic products in the MC1 hydrolysate. Biogas and methane production yields from cotton stalk were significantly increased following MC1 pretreatment. In addition, the methane production rate from the treated cotton stalk was greater than that from the untreated sample. PMID:26896713

  15. Location and chemical composition of microbially induced phosphorus precipitates in anaerobic and aerobic granular sludge.

    Science.gov (United States)

    Mañas, A; Spérandio, M; Decker, F; Biscans, B

    2012-01-01

    This work focuses on combined scanning electron microscopy and energy dispersive X-ray analysis (SEM-EDX) applied to granular sludge used for biological treatment of high-strength wastewater effluents. Mineral precipitation is shown to occur in the core of microbial granules under different operating conditions. Three dairy wastewater effluents, from three different upflow anaerobic sludge blanket (UASB) reactors and two aerobic granular sequenced batch reactors (GSBR) were evaluated. The relationship between the solid phase precipitation and the chemical composition of the wastewater was investigated with PHREEQC software (calculation of saturation indexes). Results showed that pH, Ca:P ratios and biological reactions played a major role in controlling the biomineralization phenomena. Thermodynamics calculations can be used to foresee the nature of bio-precipitates, but the location of the mineral concretions will need further investigation as it is certainly due to local microbial activity. PMID:23393959

  16. Effects of sludge inoculum and organic feedstock on active microbial communities and methane yield during anaerobic digestion

    OpenAIRE

    Wilkins, David; Rao, Subramanya; Lu, Xiaoying; Lee, Patrick K. H.

    2015-01-01

    Anaerobic digestion (AD) is a widespread microbial technology used to treat organic waste and recover energy in the form of methane (“biogas”). While most AD systems have been designed to treat a single input, mixtures of digester sludge and solid organic waste are emerging as a means to improve efficiency and methane yield. We examined laboratory anaerobic cultures of AD sludge from two sources amended with food waste, xylose, and xylan at mesophilic temperatures, and with cellulose at meso-...

  17. Enrichment and characterization of an anaerobic cellulolytic microbial consortium SQD-1.1 from mangrove soil.

    Science.gov (United States)

    Gao, Zhao-Ming; Xu, Xun; Ruan, Ling-Wei

    2014-01-01

    Enrichment of microbial consortia provides an approach to simulate and investigate microbial communities in natural environments. In this study, a cellulolytic microbial consortium SQD-1.1 was enriched from mangrove soil of Qinglan port (Hainan, China) by 27 times continuous subcultivation under anaerobic static conditions. The consortium could completely degrade 0.2% (w/v) filter paper within 3 days and utilized it as the sole carbon source. PCR-denaturing gradient gel electrophoresis analysis revealed a stable microbial community structure in the incubation process of 10 days and in the procedure of subcultivation. Twenty-four operational taxonomic units belonging to seven phyla were obtained from the full-length 16S rRNA gene library. Five clones, closest related to the genera Alkaliflexus, Clostridium, Alistipes, Spirochaeta, and Trichococcus, were the predominant ones. Among them, M117, phylogeneticly showing high similarity (16S rRNA gene identity, 95.3%) with the cellulolytic anaerobic bacterium Clostridium straminisolvens CSK1(T), was the potential key cellulolytic bacterium. Using the plate cultivation method, 12 strains, including one potential new species and four potential new species of new genera, were isolated. The strain P2, corresponding to the most frequently detected clone (M05) in the 16S rRNA gene library, showed both CMCase and xylanase activity and may be another important cellulolytic bacterium. The findings of cellulase activity in cell pellet and cohesion and dockerin domains in metagenome data further suggested the potential of utilization of cellulosomes by the consortium to degrade cellulose. Consortium SQD-1.1 provides a candidate for investigating the mechanism of cellulose degradation under anoxic conditions in natural environments. PMID:23529681

  18. NMR and MALDI-TOF MS based characterization of exopolysaccharides in anaerobic microbial aggregates from full-scale reactors

    KAUST Repository

    Gonzalez-Gil, Graciela

    2015-09-22

    Anaerobic granular sludge is composed of multispecies microbial aggregates embedded in a matrix of extracellular polymeric substances (EPS). Here we characterized the chemical fingerprint of the polysaccharide fraction of EPS in anaerobic granules obtained from full-scale reactors treating different types of wastewater. Nuclear magnetic resonance (NMR) signals of the polysaccharide region from the granules were very complex, likely as a result of the diverse microbial population in the granules. Using nonmetric multidimensional scaling (NMDS), the 1H NMR signals of reference polysaccharides (gellan, xanthan, alginate) and those of the anaerobic granules revealed that there were similarities between the polysaccharides extracted from granules and the reference polysaccharide alginate. Further analysis of the exopolysaccharides from anaerobic granules, and reference polysaccharides using matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) revealed that exopolysaccharides from two of the anaerobic granular sludges studied exhibited spectra similar to that of alginate. The presence of sequences related to the synthesis of alginate was confirmed in the metagenomes of the granules. Collectively these results suggest that alginate-like exopolysaccharides are constituents of the EPS matrix in anaerobic granular sludge treating different industrial wastewater. This finding expands the engineered environments where alginate has been found as EPS constituent of microbial aggregates.

  19. Cellulose Digestion and Metabolism Induced Biocatalytic Transitions in Anaerobic Microbial Ecosystems

    Directory of Open Access Journals (Sweden)

    Akira Yamazawa

    2013-12-01

    Full Text Available Anaerobic digestion of highly polymerized biomass by microbial communities present in diverse microbial ecosystems is an indispensable metabolic process for biogeochemical cycling in nature and for industrial activities required to maintain a sustainable society. Therefore, the evaluation of the complicated microbial metabolomics presents a significant challenge. We here describe a comprehensive strategy for characterizing the degradation of highly crystallized bacterial cellulose (BC that is accompanied by metabolite production for identifying the responsible biocatalysts, including microorganisms and their metabolic functions. To this end, we employed two-dimensional solid- and one-dimensional solution-state nuclear magnetic resonance (NMR profiling combined with a metagenomic approach using stable isotope labeling. The key components of biocatalytic reactions determined using a metagenomic approach were correlated with cellulose degradation and metabolic products. The results indicate that BC degradation was mediated by cellulases that contain carbohydrate-binding modules and that belong to structural type A. The degradation reactions induced the metabolic dynamics of the microbial community and produced organic compounds, such as acetic acid and propionic acid, mainly metabolized by clostridial species. This combinatorial, functional and structural metagenomic approach is useful for the comprehensive characterization of biomass degradation, metabolic dynamics and their key components in diverse ecosystems.

  20. A comprehensive microbial insight into two-stage anaerobic digestion of food waste-recycling wastewater.

    Science.gov (United States)

    Shin, Seung Gu; Han, Gyuseong; Lim, Juntaek; Lee, Changsoo; Hwang, Seokhwan

    2010-09-01

    Microbial community structures were assessed in a two-stage anaerobic digestion system treating food waste-recycling wastewater. The reactors were operated for 390 d at 10 different hydraulic retention times (HRTs) ranging from 25 to 4 d. Stable operation was achieved with the overall chemical oxygen demand (COD) removal efficiency of 73.0-85.9% at organic loading rate of up to 35.6 g COD/L·d. Performance of the acidogenic reactors, however, changed significantly during operation. This change coincided with transition of the bacterial community from one dominated by Aeriscardovia- and Lactobacillus amylovorus-related species to one dominated by Lactobacillus acetotolerans- and Lactobacillus kefiri-like organisms. In methanogenic reactors, the microbial community structures also changed at this stage along with the shift from Methanoculleus- to Methanosarcina-like organisms. This trend was confirmed by the non-metric multidimensional scaling joint plot of microbial shifts along with performance parameters. These results indicated that the overall process performance was relatively stable compared to the dynamic changes in the microbial structures and the acidogenic performance. PMID:20678786

  1. Development of Electroactive and Anaerobic Ammonium-Oxidizing (Anammox Biofilms from Digestate in Microbial Fuel Cells

    Directory of Open Access Journals (Sweden)

    Enea Gino Di Domenico

    2015-01-01

    Full Text Available Microbial Fuel cells (MFCs have been proposed for nutrient removal and energy recovery from different wastes. In this study the anaerobic digestate was used to feed H-type MFC reactors, one with a graphite anode preconditioned with Geobacter sulfurreducens and the other with an unconditioned graphite anode. The data demonstrate that the digestate acts as a carbon source, and even in the absence of anode preconditioning, electroactive bacteria colonise the anodic chamber, producing a maximum power density of 172.2 mW/m2. The carbon content was also reduced by up to 60%, while anaerobic ammonium oxidation (anammox bacteria, which were found in the anodic compartment of the reactors, contributed to nitrogen removal from the digestate. Overall, these results demonstrate that MFCs can be used to recover anammox bacteria from natural sources, and it may represent a promising bioremediation unit in anaerobic digestor plants for the simultaneous nitrogen removal and electricity generation using digestate as substrate.

  2. Pyrosequencing reveals microbial community profile in anaerobic bio-entrapped membrane reactor for pharmaceutical wastewater treatment.

    Science.gov (United States)

    Ng, Kok Kwang; Shi, Xueqing; Ong, Say Leong; Ng, How Yong

    2016-01-01

    In this study, pharmaceutical wastewater with high salinity and total chemical oxygen demand (TCOD) was treated by an anaerobic membrane bioreactor (AnMBR) and an anaerobic bio-entrapped membrane reactor (AnBEMR). The microbial populations and communities were analyzed using the 454 pyrosequencing method. The hydraulic retention time (HRT), membrane flux and mean cell residence time (MCRT) were controlled at 30.6h, 6L/m(2)h and 100d, respectively. The results showed that the AnBEMR achieved higher TCOD removal efficiency and greater biogas production compared to the AnMBR. Through DNA pyrosequencing analysis, both the anaerobic MBRs showed similar dominant groups of bacteria and archaea. However, phylum Elusimicrobia of bacteria was only detected in the AnBEMR; the higher abundance of dominant archaeal genus Methanimicrococcus found in the AnBEMR could play an important role in degradation of the major organic pollutant (i.e., trimethylamine) present in the pharmaceutical wastewater. PMID:26577579

  3. Microbial community structure associated with the high loading anaerobic codigestion of olive mill and abattoir wastewaters.

    Science.gov (United States)

    Gannoun, Hana; Omri, Ilhem; Chouari, Rakia; Khelifi, Eltaief; Keskes, Sajiaa; Godon, Jean-Jacques; Hamdi, Moktar; Sghir, Abdelghani; Bouallagui, Hassib

    2016-02-01

    The effect of increasing the organic loading rates (OLRs) on the performance of the anaerobic codigestion of olive mill (OMW) and abattoir wastewaters (AW) was investigated under mesophilic and thermophilic conditions. The structure of the microbial community was also monitored. Increasing OLR to 9g of chemical oxygen demand (COD) L(-1)d(-1) affected significantly the biogas yield and microbial diversity at 35°C. However, at 55°C digester remained stable until OLR of 12g of CODL(-1)d(-1) with higher COD removal (80%) and biogas yield (0.52Lg(-1) COD removed). Significant differences in the bacterial communities were detected between mesophilic and thermophilic conditions. The dominant phyla detected in the digester at both phases were the Firmicutes, Actinobacteria, Bacteroidetes, Synergistetes and Spirochaete. However, Verrucomicrobia, Proteobacteria and the candidate division BRC1 were only detected at thermophilic conditions. The Methanobacteriales and the Thermoplasmales were found as a high predominant archaeal member in the anaerobic sludge. PMID:26687494

  4. Community shifts within anaerobic digestion microbiota facing phenol inhibition: Towards early warning microbial indicators?

    Science.gov (United States)

    Poirier, Simon; Bize, Ariane; Bureau, Chrystelle; Bouchez, Théodore; Chapleur, Olivier

    2016-09-01

    Performance stability is a key operational issue for anaerobic digestion (AD) and phenolic compounds are regularly mentioned as a major cause of digester failures. To get more insights into AD microbiota response to a wide range of inhibition levels, anaerobic batch toxicity assays were conducted with ten phenol concentrations up to 5.00 g/L. Final AD performance was not impaired up to 1.00 g/L. However, progressive shifts in microbial community structure were detected from 0.50 g/L. The methanogenic function was maintained along with increasing initial phenol concentrations up to 2.00 g/L thanks to the emergence of genus Methanoculleus at the expense of Methanosarcina. Within syntrophic populations, family Syntrophomonadaceae proportion was gradually reduced by phenol while Synergistaceae gained in importance in the microbiome. Moreover, at 2.00 g/L, the relative abundance of families belonging to order Clostridiales dropped, leading to the predominance of populations assigned to order Bacteroidales even though it did not prevent final AD performance deterioration. It illustrates the high level of adaptability of archaeal and bacterial communities and suggests the possibility of determining early warning microbial indicators associated with phenol inhibition. PMID:27208731

  5. Microbial toxicity and characterization of DNAN (bio)transformation product mixtures.

    Science.gov (United States)

    Olivares, Christopher I; Sierra-Alvarez, Reyes; Alvarez-Nieto, Cristina; Abrell, Leif; Chorover, Jon; Field, Jim A

    2016-07-01

    2,4-Dinitroanisole (DNAN) is an emerging insensitive munitions compound. It undergoes rapid (bio)transformation in soils and anaerobic sludge. The primary transformation pathway catalyzed by a combination of biotic and abiotic factors is nitrogroup reduction followed by coupling of reactive intermediates to form azo-dimers. Additional pathways include N-acetylation and O-demethoxylation. Toxicity due to (bio)transformation products of DNAN has received little attention. In this study, the toxicity of DNAN (bio)transformation monomer products and azo-dimer and trimer surrogates to acetoclastic methanogens and the marine bioluminescent bacterium, Allivibrio fischeri, were evaluated. Methanogens were severely inhibited by 3-nitro-4-methoxyaniline (MENA), with a 50%-inhibiting concentration (IC50) of 25 μM, which is more toxic than DNAN with the same assay, but posed a lower toxicity to Allivibrio fischeri (IC50 = 219 μM). On the other hand, N-(5-amino-2-methoxyphenyl) acetamide (Ac-DAAN) was the least inhibitory test-compound for both microbial targets. Azo-dimer and trimer surrogates were very highly toxic to both microbial systems, with a toxicity similar or stronger than that of DNAN. A semi-quantitative LC-QTOF-MS method was employed to determine product mixture profiles at different stages of biotransformation, and compared with the microbial toxicity of the product-mixtures formed. Methanogenic toxicity increased due to putative reactive nitroso-intermediates as DNAN was reduced. However, the inhibition later attenuated as dimers became the predominant products in the mixtures. In contrast, A. fischeri tolerated the initial biotransformation products but were highly inhibited by the predominant azo-dimer products formed at longer incubation times, suggesting these ultimate products are more toxic than DNAN. PMID:27085064

  6. Anaerobes beyond anaerobic digestion

    OpenAIRE

    Sousa, D. Z.; Pereira, M A; Alves, M.M.

    2009-01-01

    Anaerobic microorganisms are widespread in nature. Sediments, gastrointestinal tracks, volcanic vents, geothermal sources are examples of habitats where anaerobic metabolism prevail, in some cases at extreme temperature, pH and pressure conditions. In such microbial ecosystems waste of some is food for others in a true integrated structure. Anaerobic microorganisms are able to use a wide variety of organic and inorganic compounds. Recalcitrant compounds, such as hydrocarbons, a...

  7. Removal of anaerobic soluble microbial products in a biological activated carbon reactor

    Institute of Scientific and Technical Information of China (English)

    Xiaojing Dong; Weili Zhou; Shengbing He

    2013-01-01

    The soluble microbial products (SMP) in the biological treatment effluent are generally of great amount and are poorly biodegradable.Focusing on the biodegradation of anaerobic SMP,the biological activated carbon (BAC) was introduced into the anaerobic system.The experiments were conducted in two identical lab-scale up-flow anaerobic sludge blanket (UASB) reactors.The high strength organics were degraded in the first UASB reactor (UASB1) and the second UASB (UASB2,i.e.,BAC) functioned as a polishing step to remove SMP produced in UASB1.The results showed that 90% of the SMP could be removed before granular activated carbon was saturated.After the saturation,the SMP removal decreased to 60% on the average.Analysis of granular activated carbon adsorption revealed that the main role of SMP removal in BAC reactor was biodegradation.A strain of SMP-degrading bacteria,which was found highly similar to Klebsiella sp.,was isolated,enriched and inoculated back to the BAC reactor.When the influent chemical oxygen demand (COD) was 10,000 mg/L and the organic loading rate achieved 10 kg COD/(m3·day),the effluent from the BAC reactor could meet the discharge standard without further treatment.Anaerobic BAC reactor inoculated with the isolated Klebsiella was proved to be an effective,cheap and easy technical treatment approach for the removal of SMP in the treatment of easily-degradable wastewater with COD lower than 10,000 mg/L.

  8. Microbial community dynamics in the two-stage anaerobic digestion process of two-phase olive mill residue

    OpenAIRE

    Rincón, Bárbara; Portillo Guisado, María del Carmen; González Grau, Juan Miguel; Borja Padilla, Rafael

    2013-01-01

    The microbial communities in a two-stage anaerobic digestion process treating olive mill >solid> residues were studied by molecular identification techniques. The microbial species identification in the hydrolytic-acidogenic step and in the methanogenic step was carried out by polymerase chain reaction amplification of 16S ribosomal RNA genes, denaturing gradient gel electrophoresis, cloning, and sequencing. This study revealed that Firmicutes (from 31.1 to 61.1 %, average 42.1 %) mainly repr...

  9. Organic loading rate: A promising microbial management tool in anaerobic digestion.

    Science.gov (United States)

    Ferguson, Robert M W; Coulon, Frédéric; Villa, Raffaella

    2016-09-01

    This study investigated the effect of changes in organic loading rate (OLR) and feedstock on the volatile fatty acids (VFAs) production and their potential use as a bioengineering management tool to improve stability of anaerobic digesters. Digesters were exposed to one or two changes in OLR using the same or different co-substrates (Fat Oil and Grease waste (FOG) and/or glycerol). Although all the OLR fluctuations produced a decrease in biogas and methane production, the digesters exposed twice to glycerol showed faster recovery towards stable conditions after the second OLR change. This was correlated with the composition of the VFAs produced and their mode of production, from parallel to sequential, resulting in a more efficient recovery from inhibition of methanogenesis. The change in acids processing after the first OLR increase induced a shift in the microbial community responsible of the process optimisation when the digesters were exposed to a subsequent OLR increase with the same feedstock. When the digesters were exposed to an OLR change with a different feedstock (FOG), the recovery took 7d longer than with the same one (glycerol). However, the microbial community showed functional resilience and was able to perform similarly to pre-exposure conditions. Thus, changes in operational conditions can be used to influence microbial community structure for anaerobic digestion (AD) optimisation. Finally, shorter recovery times and increased resilience of digesters were linked to higher numbers of Clostridia incertae sedis XV, suggesting that this group may be a good candidate for AD bioaugmentation to speed up recovery after process instability or OLR increase. PMID:27214347

  10. Anaerobic testosterone degradation in Steroidobacter denitrificans - Identification of transformation products

    Energy Technology Data Exchange (ETDEWEB)

    Fahrbach, Michael, E-mail: michael.fahrbach@web.d [Eawag, Swiss Federal Institute of Aquatic Science and Technology, Uberlandstrasse 133, P.O. Box 611, CH-8600 Duebendorf (Switzerland); Krauss, Martin, E-mail: martin.krauss@eawag.c [Eawag, Swiss Federal Institute of Aquatic Science and Technology, Uberlandstrasse 133, P.O. Box 611, CH-8600 Duebendorf (Switzerland); Preiss, Alfred, E-mail: alfred.preiss@item.fraunhofer.d [Fraunhofer Institute of Toxicology and Experimental Medicine (ITEM), Nikolai-Fuchs-Strasse 1, D-30625 Hannover (Germany); Kohler, Hans-Peter E., E-mail: hkohler@eawag.c [Eawag, Swiss Federal Institute of Aquatic Science and Technology, Uberlandstrasse 133, P.O. Box 611, CH-8600 Duebendorf (Switzerland); Hollender, Juliane, E-mail: juliane.hollender@eawag.c [Eawag, Swiss Federal Institute of Aquatic Science and Technology, Uberlandstrasse 133, P.O. Box 611, CH-8600 Duebendorf (Switzerland)

    2010-08-15

    The transformation of the androgenic steroid testosterone by gammaproteobacterium Steroidobacter denitrificans was studied under denitrifying conditions. For the first time, growth experiments showed that testosterone was mineralized under consumption of nitrate and concurrent biomass production. Experiments with cell suspensions using [4-{sup 14}C]-testosterone revealed the intermediate production of several transformation products (TPs). Characterisation of ten TPs was carried out by means of HPLC coupled to high resolution mass spectrometry with atmospheric pressure chemical ionization as well as {sup 1}H and {sup 13}C NMR spectroscopy. 3{beta}-hydroxy-5{alpha}-androstan-17-one (trans-androsterone) was formed in the highest amount followed by 5{alpha}-androstan-3,17-dione. The data suggests that several dehydrogenation and hydrogenation processes take place concurrently in ring A and D because no consistent time-resolved pattern of TP peaks was observed and assays using 2 TPs as substrates resulted in essentially the same TPs. The further transformation of testosterone in S. denitrificans seems to be very efficient and fast without formation of detectable intermediates. - Testosterone is completely mineralized by Steroidobacter denitrificans under denitrifying conditions with initial formation of several reduced and oxidized transformation products.

  11. Rapid establishment of thermophilic anaerobic microbial community during the one-step startup of thermophilic anaerobic digestion from a mesophilic digester.

    Science.gov (United States)

    Tian, Zhe; Zhang, Yu; Li, Yuyou; Chi, Yongzhi; Yang, Min

    2015-02-01

    The purpose of this study was to explore how fast the thermophilic anaerobic microbial community could be established during the one-step startup of thermophilic anaerobic digestion from a mesophilic digester. Stable thermophilic anaerobic digestion was achieved within 20 days from a mesophilic digester treating sewage sludge by adopting the one-step startup strategy. The succession of archaeal and bacterial populations over a period of 60 days after the temperature increment was followed by using 454-pyrosequencing and quantitative PCR. After the increase of temperature, thermophilic methanogenic community was established within 11 days, which was characterized by the fast colonization of Methanosarcina thermophila and two hydrogenotrophic methanogens (Methanothermobacter spp. and Methanoculleus spp.). At the same time, the bacterial community was dominated by Fervidobacterium, whose relative abundance rapidly increased from 0 to 28.52 % in 18 days, followed by other potential thermophilic genera, such as Clostridium, Coprothermobacter, Anaerobaculum and EM3. The above result demonstrated that the one-step startup strategy could allow the rapid establishment of the thermophilic anaerobic microbial community. PMID:25463927

  12. Applicability of anaerobic nitrate-dependent Fe(II) oxidation to microbial enhanced oil recovery (MEOR).

    Science.gov (United States)

    Zhu, Hongbo; Carlson, Han K; Coates, John D

    2013-08-01

    Microbial processes that produce solid-phase minerals could be judiciously applied to modify rock porosity with subsequent alteration and improvement of floodwater sweep in petroleum reservoirs. However, there has been little investigation of the application of this to enhanced oil recovery (EOR). Here, we investigate a unique approach of altering reservoir petrology through the biogenesis of authigenic rock minerals. This process is mediated by anaerobic chemolithotrophic nitrate-dependent Fe(II)-oxidizing microorganisms that precipitate iron minerals from the metabolism of soluble ferrous iron (Fe(2+)) coupled to the reduction of nitrate. This mineral biogenesis can result in pore restriction and reduced pore throat diameter. Advantageously and unlike biomass plugs, these biominerals are not susceptible to pressure or thermal degradation. Furthermore, they do not require continual substrate addition for maintenance. Our studies demonstrate that the biogenesis of insoluble iron minerals in packed-bed columns results in effective hydrology alteration and homogenization of heterogeneous flowpaths upon stimulated microbial Fe(2+) biooxidation. We also demonstrate almost 100% improvement in oil recovery from hydrocarbon-saturated packed-bed columns as a result of this metabolism. These studies represent a novel departure from traditional microbial EOR approaches and indicate the potential for nitrate-dependent Fe(2+) biooxidation to improve volumetric sweep efficiency and enhance both the quality and quantity of oil recovered. PMID:23799785

  13. Optimisation of 16S rDNA amplicon sequencing protocols for microbial community profiling of anaerobic digesters

    DEFF Research Database (Denmark)

    Kirkegaard, Rasmus Hansen; McIlroy, Simon Jon; Larsen, Poul;

    A reliable and reproducible method for identification and quantification of the microorganisms involved in biogas production is important for the study and understanding of the microbial communities responsible for the function of anaerobic digester systems. DNA based identification using 16S rRN...

  14. Microbial Community Response to Seasonal Temperature Variation in a Small-Scale Anaerobic Digester

    Directory of Open Access Journals (Sweden)

    Frederick Michel

    2013-10-01

    Full Text Available The Bacterial and Archaeal communities in a 1.14 m3 ambient temperature anaerobic digester treating dairy cow manure were investigated using terminal restriction fragment length polymorphisms (T-RFLP and direct sequencing of the cloned polymerase chain reaction (PCR products. Results indicate shifts in the structure of the both the Archaeal and Bacterial communities coincided with digester re-inoculation as well as temperature and loading rate changes. Following re-inoculation of the sour digester, the predominant Archaea shifted from Methanobrevibacter to Methanosarcina, which was the most abundant Archaea in the inoculum. Methonosarcina was replaced by Methanosaeta after the resumption of digester loading in the summer of 2010. Methanosaeta began to decline in abundance as the digester temperature cooled in the fall of 2010 while Methanobrevibacter increased in abundance. The microbial community rate of change was variable during the study period, with the most rapid changes occurring after re-inoculation.

  15. Anaerobic digestion and co-digestion processes of vegetable and fruit residues: process and microbial ecology.

    Science.gov (United States)

    Garcia-Peña, E I; Parameswaran, P; Kang, D W; Canul-Chan, M; Krajmalnik-Brown, R

    2011-10-01

    This study evaluated the feasibility of methane production from fruit and vegetable waste (FVW) obtained from the central food distribution market in Mexico City using an anaerobic digestion (AD) process. Batch systems showed that pH control and nitrogen addition had significant effects on biogas production, methane yield, and volatile solids (VS) removal from the FVW (0.42 m(biogas)(3)/kg VS, 50%, and 80%, respectively). Co-digestion of the FVW with meat residues (MR) enhanced the process performance and was also evaluated in a 30 L AD system. When the system reached stable operation, its methane yield was 0.25 (m(3)/kg TS), and the removal of the organic matter measured as the total chemical demand (tCOD) was 65%. The microbial population (general Bacteria and Archaea) in the 30 L system was also determined and characterized and was closely correlated with its potential function in the AD system. PMID:21865034

  16. Effect of Ce(3+) on soluble microbial products production in anaerobic granular sludge digestion.

    Science.gov (United States)

    Fu, Bo; Liang, Rui; Xia, Qing; Ding, Lili; Xu, Ke; Ren, Hongqiang

    2011-01-01

    Upflow anaerobic sludge bed reactors fed on glucose were used to investigate the effects of Ce(3+) on soluble microbial products (SMP) production, which is the majority of the residual chemical oxygen demand present in the effluent. It was found that Ce(3+) concentration of 0.05 mg/L had no significant effect on the amount of SMP production, whereas that of 1 mg/L led to the increase in SMP production. The molecular-weight distribution and carbohydrate analysis indicated that an increase in SMP production may be partly attributed to the release of extracellular polymeric substances (EPS) into the bulk solution resulted from cerium toxicity, and the nucleic acids analysis suggested that increased cell lysis also contributed to SMP accumulation in the presence of Ce(3+). The increase in SMP production in the presence of Ce(3+) is possibly a consequence of the release of EPS and increased cell lysis due to cerium toxicity. PMID:22179643

  17. The biotransformation of brewer's spent grain into biogas by anaerobic microbial communities.

    Science.gov (United States)

    Malakhova, Dina V; Egorova, Maria A; Prokudina, Ljuba I; Netrusov, Alexander I; Tsavkelova, Elena A

    2015-12-01

    The present study reports on the biotransformation of the brewer's spent grain (BSG) in co-digestion with Jerusalem artichoke (JA, Helianthus tuberosus L.) phytomass by thermophilic (+55 °C) and mesophilic (+30 °C) anaerobic methanogenic communities. BSG is a by-product of the beer-brewing process generated in large amounts, in which utilization provokes a negative effect on the environment. In this study, we will show an effective conversion of BSG into biogas by selected microbial communities, obtained from different sources (animal manure and previously isolated microbial consortia). The stimulation of methanogenesis was reached by the co-digestion of JA's phytomass (stem and leaves). The optimized conditions for microbial stable cultivation included the use of nutrient medium, containing yeast extract and trace element solution. The optimal BSG concentration in biogas production was 50 and 100 g L(-1). Under thermophilic conditions, the maximum total methane production reached 64%, and it comprised around 6-8 and 9-11 of L CH4 per 100 g of fermented BSG without and with co-digested JA, respectively, when the fresh inoculum was added. Although, after a year of re-cultivation, the values reduced to around 6-7, and 6-10 L CH4/100 g BSG, correspondingly, the selected microbial communities showed effective biotransformation of BSG. The supplementation of soil with the residual fermented BSG (10%, w/w) resulted in the promotion of lettuce (Lepidium sativum L.) growth. The results obtained demonstrate a potential for complete BSG utilization via biogas production and application as a soil additive. PMID:26399858

  18. Triclocarban Influences Antibiotic Resistance and Alters Anaerobic Digester Microbial Community Structure.

    Science.gov (United States)

    Carey, Daniel E; Zitomer, Daniel H; Hristova, Krassimira R; Kappell, Anthony D; McNamara, Patrick J

    2016-01-01

    Triclocarban (TCC) is one of the most abundant organic micropollutants detected in biosolids. Lab-scale anaerobic digesters were amended with TCC at concentrations ranging from the background concentration of seed biosolids (30 mg/kg) to toxic concentrations of 850 mg/kg to determine the effect on methane production, relative abundance of antibiotic resistance genes, and microbial community structure. Additionally, the TCC addition rate was varied to determine the impacts of acclimation time. At environmentally relevant TCC concentrations (max detect = 440 mg/kg), digesters maintained function. Digesters receiving 450 mg/kg of TCC maintained function under gradual TCC addition, but volatile fatty acid concentrations increased, pH decreased, and methane production ceased when immediately fed this concentration. The concentrations of the mexB gene (encoding for a multidrug efflux pump) were higher with all concentrations of TCC compared to a control, but higher TCC concentrations did not correlate with increased mexB abundance. The relative abundance of the gene tet(L) was greater in the digesters that no longer produced methane, and no effect on the relative abundance of the class 1 integron integrase encoding gene (intI1) was observed. Illumina sequencing revealed substantial community shifts in digesters that functionally failed from increased levels of TCC. More subtle, yet significant, community shifts were observed in digesters amended with TCC levels that did not inhibit function. This research demonstrates that TCC can select for a multidrug resistance encoding gene in mixed community anaerobic environments, and this selection occurs at concentrations (30 mg/kg) that can be found in full-scale anaerobic digesters (U.S. median concentration = 22 mg/kg, mean = 39 mg/kg). PMID:26588246

  19. Influence of co-substrate on textile wastewater treatment and microbial community changes in the anaerobic biological sulfate reduction process.

    Science.gov (United States)

    Rasool, Kashif; Mahmoud, Khaled A; Lee, Dae Sung

    2015-12-15

    This study investigated the anaerobic treatment of sulfate-rich synthetic textile wastewater in three sulfidogenic sequential batch reactors (SBRs). The experimental protocol was designed to examine the effect of three different co-substrates (lactate, glucose, and ethanol) and their concentrations on wastewater treatment performance. Sulfate reduction and dye degradation were improved when lactate and ethanol were used as electron donors, as compared with glucose. Moreover, under co-substrate limited concentrations, color, sulfate, and chemical oxygen demand (COD) removal efficiencies were declined. By reducing co-substrate COD gradually from 3000 to 500 mg/L, color removal efficiencies were decreased from 98.23% to 78.46%, 63.37%, and 69.10%, whereas, sulfate removal efficiencies were decreased from 98.42%, 82.35%, and 87.0%, to 30.27%, 21.50%, and 10.13%, for lactate, glucose, and ethanol fed reactors, respectively. Fourier transform infrared spectroscopy (FTIR) and total aromatic amine analysis revealed lactate to be a potential co-substrate for further biodegradation of intermediate metabolites formed after dye degradation. Pyrosequencing analysis showed that microbial community structure was significantly affected by the co-substrate. The reactor with lactate as co-substrate showed the highest relative abundance of sulfate reducing bacteria (SRBs), followed by ethanol, whereas the glucose-fed reactor showed the lowest relative abundance of SRB. PMID:26241771

  20. Influence of Oxygen and Nitrate on Fe (Hydr)oxide Mineral Transformation and Soil Microbial Communities during Redox Cycling.

    Science.gov (United States)

    Mejia, Jacqueline; Roden, Eric E; Ginder-Vogel, Matthew

    2016-04-01

    Oscillations between reducing and oxidizing conditions are observed at the interface of anaerobic/oxic and anaerobic/anoxic environments, and are often stimulated by an alternating flux of electron donors (e.g., organic carbon) and electron acceptors (e.g., O2 and NO3(-)). In iron (Fe) rich soils and sediments, these oscillations may stimulate the growth of both Fe-reducing bacteria (FeRB) and Fe-oxidizing bacteria (FeOB), and their metabolism may induce cycling between Fe(II) and Fe(III), promoting the transformation of Fe (hydr)oxide minerals. Here, we examine the mineralogical evolution of lepidocrocite and ferrihydrite, and the adaptation of a natural microbial community to alternating Fe-reducing (anaerobic with addition of glucose) and Fe-oxidizing (with addition of nitrate or air) conditions. The growth of FeRB (e.g., Geobacter) is stimulated under anaerobic conditions in the presence of glucose. However, the abundance of these organisms depends on the availability of Fe(III) (hydr)oxides. Redox cycling with nitrate results in decreased Fe(II) oxidation thereby decreasing the availability of Fe(III) for FeRB. Additionally, magnetite is detected as the main product of both lepidocrocite and ferrihydrite reduction. In contrast, introduction of air results in increased Fe(II) oxidation, increasing the availability of Fe(III) and the abundance of Geobacter. In the lepidocrocite reactors, Fe(II) oxidation by dissolved O2 promotes the formation of ferrihydrite and lepidocrocite, whereas in the ferrihydrite reactors we observe a decrease in magnetite stoichiometry (e.g., oxidation). Understanding Fe (hydr)oxide transformation under environmentally relevant redox cycling conditions provides insight into nutrient availability and transport, contaminant mobility, and microbial metabolism in soils and sediments. PMID:26949922

  1. Anaerobic transformation of 1,4-Tyrosol to 4-Hydoxyphenylacetate by Desulfovibrio Species

    Energy Technology Data Exchange (ETDEWEB)

    Chamkh, F.; El Bakouchi, I.; Ouazzani, N.; Said Eddarir, S.; Bennisse, R.; Qatibi, A. I.

    2009-07-01

    1,4 Tyrosol (4-hydroxyphenylethanol) is a phenolic compound that is typically found in olive oil, olive brine, and olive oil mill wastewaters. Its anaerobic transformation was investigated in Desulfovibrio strain EMSSDQT (chamkh et al., 2008) and Desulgovibrio alcoholivorans (Qatibi et al., 1991) using high-performance liquid chromatography (HPLC) and nuclear magnetic resonance ( {sup 1}3C-NMR) as analysis technic. To our knowledge, this is the first report showing the transformation of 1,4-tyrosol to 4-hydroxyphenylacetate (PHPA) by Desulfovibrio sp in anoxic conditions. (Author)

  2. Anaerobic transformation of 1,4-Tyrosol to 4-Hydoxyphenylacetate by Desulfovibrio Species

    International Nuclear Information System (INIS)

    1,4 Tyrosol (4-hydroxyphenylethanol) is a phenolic compound that is typically found in olive oil, olive brine, and olive oil mill wastewaters. Its anaerobic transformation was investigated in Desulfovibrio strain EMSSDQT (chamkh et al., 2008) and Desulgovibrio alcoholivorans (Qatibi et al., 1991) using high-performance liquid chromatography (HPLC) and nuclear magnetic resonance ( 13C-NMR) as analysis technic. To our knowledge, this is the first report showing the transformation of 1,4-tyrosol to 4-hydroxyphenylacetate (PHPA) by Desulfovibrio sp in anoxic conditions. (Author)

  3. Changes in microbial community structures due to varying operational conditions in the anaerobic digestion of oxytetracycline-medicated cow manure.

    Science.gov (United States)

    Turker, Gokhan; Aydin, Sevcan; Akyol, Çağrı; Yenigun, Orhan; Ince, Orhan; Ince, Bahar

    2016-07-01

    Management of manure containing veterinary antibiotics is a major concern in anaerobic treatment systems because of their possible adverse effects on microbial communities. Therefore, the aim of study was to investigate how oxytetracycline (OTC) influences bacteria and acetoclastic and hydrogenotrophic methanogens under varying operational conditions in OTC-medicated and non-medicated anaerobic cow manure digesters. Concentrations of OTC and its metabolites throughout the anaerobic digestion were determined using ultraviolet-high-performance liquid chromatography (UV-HPLC) and tandem liquid chromatography-mass spectrometry (LC/MS/MS), respectively. Fluorescent in situ hybridization, denaturing gradient gel electrophoresis, cloning, and sequencing analyses were used to monitor changes in microbial community structures. According to the results of analytical and molecular approaches, operating conditions highly influence active microbial community dynamics and associate with biogas production and elimination of OTC and its metabolites during anaerobic digestion of cow manure in the presence of an average initial concentration of 2.2 mg OTC/L. The impact of operating conditions has a drastic effect on acetoclastic methanogens than hydrogenotrophic methanogens and bacteria. PMID:27026176

  4. The Influence of Loading Rate and Variable Temperatures on Microbial Communities in Anaerobic Digesters

    Directory of Open Access Journals (Sweden)

    Richard J. Ciotola

    2014-02-01

    Full Text Available The relationship between seasonal temperatures, organic loading rate (OLR and the structure of archaeal communities in anaerobic digesters was investigated. Previous studies have often assessed archaeal community structure at fixed temperatures and constant OLRs, or at variable temperatures not characteristic of temperate climates. The goal of this study was to determine the maximum OLR that would maintain a balanced microbial ecosystem during operation in a variable temperature range expected in a temperate climate (27–10 °C. Four-liter laboratory digesters were operated in a semi-continuous mode using dairy cow manure as the feedstock. At OLRs of 1.8 and 0.8 kg VS/m3·day the digesters soured (pH < 6.5 as a result of a decrease in temperature. The structure of the archaeal community in the sour digesters became increasingly similar to the manure feedstock with gains in the relative abundance of hydrogenotrophic methanogens. At an OLR of 0.3 kg VS/m3·day the digesters did not sour, but the archaeal community was primarily hydrogenotrophic methanogens. Recommendations for operating an ambient temperature digester year round in a temperate climate are to reduce the OLR to at least 0.3 kg VS/m3·day in colder temperatures to prevent a shift to the microbial community associated with the sour digesters.

  5. Influent wastewater microbiota and temperature influence anaerobic membrane bioreactor microbial community.

    Science.gov (United States)

    Seib, M D; Berg, K J; Zitomer, D H

    2016-09-01

    Sustainable municipal wastewater recovery scenarios highlight benefits of anaerobic membrane bioreactors (AnMBRs). However, influences of continuous seeding by influent wastewater and temperature on attached-growth AnMBRs are not well understood. In this study, four bench-scale AnMBR operated at 10 and 25°C were fed synthetic (SPE) and then real (PE) primary effluent municipal wastewater. Illumina sequencing revealed different bacterial communities in each AnMBR in response to temperature and bioreactor configuration, whereas differences were not observed in archaeal communities. Activity assays revealed hydrogenotrophic methanogenesis was the dominant methanogenic pathway at 10°C. The significant relative abundance of Methanosaeta at 10°C concomitant with low acetoclastic methanogenic activity may indicate possible Methanosaeta-Geobacter direct interspecies electron transfer. When AnMBR feed was changed to PE, continual seeding with wastewater microbiota caused AnMBR microbial communities to shift, becoming more similar to PE microbiota. Therefore, influent wastewater microbiota, temperature and reactor configuration influenced the AnMBR microbial community. PMID:27262719

  6. MICROBIAL TRANSFORMATIONS OF URANIUM AND ENVIRONMENTAL RESTORATION THROUGH BIOREMEDIATION.

    Energy Technology Data Exchange (ETDEWEB)

    FRANCIS,A.J.

    2002-09-10

    Microorganisms present in the natural environment play a significant role in the mobilization and immobilization of uranium. Fundamental understanding of the mechanisms of microbiological transformations of various chemical forms of uranium present in wastes and contaminated soils and water has led to the development of novel bioremediation processes. One process uses anaerobic bacteria to stabilize the radionuclides and toxic metals from the waste, with a concurrent reduction in volume due to the dissolution and removal of nontoxic elements from the waste matrix. In an another process, uranium and other toxic metals are removed from contaminated soils and wastes by extracting with the chelating agent citric acid. Uranium is recovered from the citric acid extract after biodegradation/photodegradation in a concentrated form as UO{sub 3} {center_dot} 2H{sub 2}O for recycling or appropriate disposal.

  7. Similar PAH fate in anaerobic digesters inoculated with three microbial communities accumulating either volatile fatty acids or methane.

    Directory of Open Access Journals (Sweden)

    Florence Braun

    Full Text Available Urban sludge produced on wastewater treatment plants are often contaminated by organic pollutants such as polycyclic aromatic hydrocarbons (PAH. Their removal under methanogenic conditions was already reported, but the factors influencing this removal remain unclear. Here, we determined the influence of microbial communities on PAH removal under controlled physico-chemical conditions. Twelve mesophilic anaerobic digesters were inoculated with three microbial communities extracted from ecosystems with contrasting pollution histories: a PAH contaminated soil, a PCB contaminated sediment and a low contaminated anaerobic sludge. These anaerobic digesters were operated during 100 days in continuous mode. A sterilised activated sludge, spiked with 13 PAH at concentrations usually encountered in full-scale wastewater treatment plants, was used as substrate. The dry matter and volatile solid degradation, the biogas production rate and composition, the volatile fatty acids (VFA production and the PAH removals were monitored. Bacterial and archaeal communities were compared in abundance (qPCR, in community structure (SSCP fingerprinting and in dominant microbial species (454-pyrosequencing. The bioreactors inoculated with the community extracted from low contaminated anaerobic sludge showed the greater methane production. The PAH removals ranged from 10% to 30%, respectively, for high and low molecular weight PAH, whatever the inoculums tested, and were highly correlated with the dry matter and volatile solid removals. The microbial community structure and diversity differed with the inoculum source; this difference was maintained after the 100 days of digestion. However, the PAH removal was not correlated to these diverse structures and diversities. We hence obtained three functional stable consortia with two contrasted metabolic activities, and three different pictures of microbial diversity, but similar PAH and matter removals. These results confirm

  8. Microbial transformations of halolactones with p-menthane system.

    Science.gov (United States)

    Mazur, Marcelina; Grudniewska, Aleksandra; Wawrzeńczyk, Czesław

    2015-01-01

    Biologically active piperitone-derived racemic iodo-, bromo- and chlorolactones (1-3) were transformed with the use of microbial enzymatic systems. Four strains of filamentous fungi Absidia glauca AM254, Absidia cylindrospora AM336, Mortierella vinaceae AM149 and Nigrospora oryzae AM8 transformed halolactones (1-3) to four new halohydroxylactones (4-7). In all biotransformations the hydroxy group was incorporated in inactivated methine carbon atom at isopropyl substituent. In N. oryzae AM8 culture the bromolactone with additional hydroxy group in α-position, relative to CO bond in γ-lactone ring, was also formed as a product. The structures of new compounds were established on the basis of spectral data. PMID:25027724

  9. Adaption of microbial community during the start-up stage of a thermophilic anaerobic digester treating food waste.

    Science.gov (United States)

    Wu, Bo; Wang, Xing; Deng, Ya-Yue; He, Xiao-Lan; Li, Zheng-Wei; Li, Qiang; Qin, Han; Chen, Jing-Tao; He, Ming-Xiong; Zhang, Min; Hu, Guo-Quan; Yin, Xiao-Bo

    2016-10-01

    A successful start-up enables acceleration of anaerobic digestion (AD) into steady state. The microbial community influences the AD performance during the start-up. To investigate how microbial communities changed during the start-up, microbial dynamics was analyzed via high-throughput sequencing in this study. The results confirmed that the AD was started up within 25 d. Thermophilic methanogens and bacterial members functioning in hydrolysis, acidogenesis, and syntrophic oxidation became predominant during the start-up stage, reflecting a quick adaption of microorganisms to operating conditions. Such predominance also indicated the great contribution of these members to the fast start-up of AD. Redundancy analysis confirmed that the bacterial abundance significantly correlated with AD conditions. The stable ratio of hydrogenotrophic methanogens to aceticlastic methanogens is also important to maintain the stability of the AD process. This work will be helpful to understand the contribution of microbial community to the start-up of AD. PMID:27251412

  10. Effect of Acetylene Concentration on Denitrification and Related Microbial Processes in Anaerobically Incubasted Soil Slurries

    Institute of Scientific and Technical Information of China (English)

    巩晓佘

    1996-01-01

    In order to study the influence of difference in C2H2 concentration on the production of CO2,N2O,NH4-N and volatile fatty acids(VFA).soil slurries with a gradient in C2H2 concentration were anaerobically incubated at 25℃ for 2 weeks.Acetate,butyrate and CO2 production and NH4-N accumulation were inhibited in the slurres in the presence of C2H2;and the inhibition effect increased with increasing C2H2 from 0 to 20 kPa in the headspace gas of the incubation bottle.However,N2O,isobutyrate and propionate production was not obviously different among the slurres amended with C2H2 from 2.5 to 20 kPa.Therefore,the results implied that the C2H2 did not promote the inhibition but only increased the side effect on other microbial processes.The C2H2 of 2.5 kPa was suggested to be the optimum choice for the present denitrification study.

  11. Performance of anaerobic fluidized membrane bioreactors using effluents of microbial fuel cells treating domestic wastewater.

    Science.gov (United States)

    Kim, Kyoung-Yeol; Yang, Wulin; Ye, Yaoli; LaBarge, Nicole; Logan, Bruce E

    2016-05-01

    Anaerobic fluidized membrane bioreactors (AFMBRs) have been mainly developed as a post-treatment process to produce high quality effluent with very low energy consumption. The performance of an AFMBR was examined using the effluent from a microbial fuel cell (MFC) treating domestic wastewater, as a function of AFMBR hydraulic retention times (HRTs) and organic matter loading rates. The MFC-AFMBR achieved 89±3% removal of the chemical oxygen demand (COD), with an effluent of 36±6mg-COD/L over 112days operation. The AFMBR had very stable operation, with no significant changes in COD removal efficiencies, for HRTs ranging from 1.2 to 3.8h, although the effluent COD concentration increased with organic loading. Transmembrane pressure (TMP) was low, and could be maintained below 0.12bar through solids removal. This study proved that the AFMBR could be operated with a short HRT but a low COD loading rate was required to achieve low effluent COD. PMID:26921870

  12. Autotrophy as a predominant mode of carbon fixation in anaerobic methane-oxidizing microbial communities.

    Science.gov (United States)

    Kellermann, Matthias Y; Wegener, Gunter; Elvert, Marcus; Yoshinaga, Marcos Yukio; Lin, Yu-Shih; Holler, Thomas; Mollar, Xavier Prieto; Knittel, Katrin; Hinrichs, Kai-Uwe

    2012-11-20

    The methane-rich, hydrothermally heated sediments of the Guaymas Basin are inhabited by thermophilic microorganisms, including anaerobic methane-oxidizing archaea (mainly ANME-1) and sulfate-reducing bacteria (e.g., HotSeep-1 cluster). We studied the microbial carbon flow in ANME-1/ HotSeep-1 enrichments in stable-isotope-probing experiments with and without methane. The relative incorporation of (13)C from either dissolved inorganic carbon or methane into lipids revealed that methane-oxidizing archaea assimilated primarily inorganic carbon. This assimilation is strongly accelerated in the presence of methane. Experiments with simultaneous amendments of both (13)C-labeled dissolved inorganic carbon and deuterated water provided further insights into production rates of individual lipids derived from members of the methane-oxidizing community as well as their carbon sources used for lipid biosynthesis. In the presence of methane, all prominent lipids carried a dual isotopic signal indicative of their origin from primarily autotrophic microbes. In the absence of methane, archaeal lipid production ceased and bacterial lipid production dropped by 90%; the lipids produced by the residual fraction of the metabolically active bacterial community predominantly carried a heterotrophic signal. Collectively our results strongly suggest that the studied ANME-1 archaea oxidize methane but assimilate inorganic carbon and should thus be classified as methane-oxidizing chemoorganoautotrophs. PMID:23129626

  13. Degradation of atrazine by microbial consortium in an anaerobic submerged biological filter.

    Science.gov (United States)

    Nasseri, Simin; Baghapour, Mohammad Ali; Derakhshan, Zahra; Faramarzian, Mohammad

    2014-09-01

    Atrazine (2-chloro-4-ethylamino-6-isopropylamino-1,3,5-triazine) (ATZ) is one of the components of S-triazine. Due to its certain characteristics, ATZ causes pollution in various ecosystems and has been of concern for its probable carcinogenic effects on humans. Researchers have used chemical and physical methods for removing ATZ from the environment. Although these methods are quick, they have not been capable of complete mineralization. Therefore, researchers are looking for methods with lower energy consumption and cost and higher efficiency. In this study, biodegradation of ATZ by microbial consortium was evaluated in the aquatic environment. The present study aimed to evaluate the efficiency of ATZ removal from aqueous environments by using an anaerobic submerged biological filter in four concentration levels of atrazine and three hydraulic retention times. The maximum efficiencies of ATZ and soluble chemical oxygen demand (SCOD) were 51.1 and 45.6%, respectively. There was no accumulation of ATZ in the biofilm and the loss of ATZ in the control reactor was negligible. This shows that ATZ removal in this system was due to biodegradation. Furthermore, the results of modeling showed that the Stover-Kincannon model had desirable fitness (R² > 99%) in loading ATZ in this biofilter. PMID:25252353

  14. Hydrodynamic chronoamperometry for probing kinetics of anaerobic microbial metabolism--case study of Faecalibacterium prausnitzii.

    Science.gov (United States)

    Prévoteau, Antonin; Geirnaert, Annelies; Arends, Jan B A; Lannebère, Sylvain; Van de Wiele, Tom; Rabaey, Korneel

    2015-01-01

    Monitoring in vitro the metabolic activity of microorganisms aids bioprocesses and enables better understanding of microbial metabolism. Redox mediators can be used for this purpose via different electrochemical techniques that are either complex or only provide non-continuous data. Hydrodynamic chronoamperometry using a rotating disc electrode (RDE) can alleviate these issues but was seldom used and is poorly characterized. The kinetics of Faecalibacterium prausnitzii A2-165, a beneficial gut microbe, were determined using a RDE with riboflavin as redox probe. This butyrate producer anaerobically ferments glucose and reduces riboflavin whose continuous monitoring on a RDE provided highly accurate kinetic measurements of its metabolism, even at low cell densities. The metabolic reaction rate increased linearly over a broad range of cell concentrations (9 × 10(4) to 5 × 10(7) cells.mL(-1)). Apparent Michaelis-Menten kinetics was observed with respect to riboflavin (KM = 6 μM; kcat = 5.3 × 10(5) s(-1), at 37 °C) and glucose (KM = 6 μM; kcat = 2.4 × 10(5) s(-1)). The short temporal resolution allows continuous monitoring of fast cellular events such as kinetics inhibition with butyrate. Furthermore, we detected for the first time riboflavin reduction by another potential probiotic, Butyricicoccus pullicaecorum. The ability of the RDE for fast, accurate, simple and continuous measurements makes it an ad hoc tool for assessing bioprocesses at high resolution. PMID:26127013

  15. Separation of competitive microorganisms using anaerobic membrane bioreactors as pretreatment to microbial electrochemical cells.

    Science.gov (United States)

    Dhar, Bipro Ranjan; Gao, Yaohuan; Yeo, Hyeongu; Lee, Hyung-Sool

    2013-11-01

    Anaerobic membrane bioreactors (AnMBRs) as pretreatment to microbial electrochemical cells (MECs) were first assessed for improving energy recovery. A dual-chamber MEC was operated at hydraulic retention time (HRT) ranging from 1 to 8d, while operating conditions for an AnMBR were fixed. Current density was increased from 7.5 ± 0 to 14 ± 1A/m(2) membrane with increasing HRT. MEC tests with AnMBR permeate (mainly propionate and acetate) and propionate medium confirmed that propionate was fermented to acetate and hydrogen gas, and anode-respiring bacteria (ARB) utilized these fermentation products as substrate. Membrane separation in the AnMBR excluded fermenters and methanogens from the MEC, and thus no methane production was found in the MEC. The lack of fermenters, however, slowed down propionate fermentation rate, which limited current density in the MEC. To symphonize fermenters, H2-consumers, and ARB in biofilm anode is essential for improving current density, and COD removal. PMID:24047682

  16. Microbial fuel cells

    International Nuclear Information System (INIS)

    Microbial fuel cells (MFC) are a promising technology for sustainable production of alternative energy and waste treatment. A microbial fuel cell transformation chemical energy in the chemical bonds in organic compounds to electrical energy through catalytic reactions of microorganisms under anaerobic conditions. It has been known for many years that it is possible to generate electricity directly by using bacteria to break down organic substrates. Key words: microbial fuel cells (MFC), biosensor, wastewater treatment

  17. Anaerobic degradation of landfill leachate using an upflow anaerobic fixed-bed reactor with microbial sulfate reduction

    International Nuclear Information System (INIS)

    This study evaluated the anaerobic degradation of landfill leachate and sulfate reduction as a function of COD/(SO42-) ratio in an upflow anaerobic fixed-bed reactor. The reactor, which was inoculated with a mixed consortium, was operated under a constant hydraulic retention time (HRT) of 5 days. We investigated the effect of COD/(SO42-) ratio variation on the sulfate reduction efficiency, hydrogen sulfide production, chemical oxygen demand (COD) removal, conductivity, and pH variation. The best reactor performance, with significant sulfate reduction efficiency and COD removal efficiency of 91% and 87%, respectively, was reached under a COD/(SO42-) ratio of 1.17. Under these conditions, microscopic analysis showed the abundance of vibrios and rod-shaped bacterial cells. Two anaerobic bacteria were isolated from the reactor sludge. Phylogenetic studies performed on these strains identified strain A1 as affiliated to Clostridium genus and strain H1 as a new species of sulfate-reducing bacteria affiliated to the Desulfovibrio genus. The closest phylogenetic relative of strain H1 was Desulfovibrio desulfuricans, at 96% similarity for partial 16S RNA gene sequence data. Physiological and metabolic characterization was performed for this strain.

  18. Solid-, Solution-, and Gas-state NMR Monitoring of 13C-Cellulose Degradation in an Anaerobic Microbial Ecosystem

    Directory of Open Access Journals (Sweden)

    Yasuhiro Date

    2013-07-01

    Full Text Available Anaerobic digestion of biomacromolecules in various microbial ecosystems is influenced by the variations in types, qualities, and quantities of chemical components. Nuclear magnetic resonance (NMR spectroscopy is a powerful tool for characterizing the degradation of solids to gases in anaerobic digestion processes. Here we describe a characterization strategy using NMR spectroscopy for targeting the input solid insoluble biomass, catabolized soluble metabolites, and produced gases. 13C-labeled cellulose produced by Gluconacetobacter xylinus was added as a substrate to stirred tank reactors and gradually degraded for 120 h. The time-course variations in structural heterogeneity of cellulose catabolism were determined using solid-state NMR, and soluble metabolites produced by cellulose degradation were monitored using solution-state NMR. In particular, cooperative changes between the solid NMR signal and 13C-13C/13C-12C isotopomers in the microbial degradation of 13C-cellulose were revealed by a correlation heat map. The triple phase NMR measurements demonstrated that cellulose was anaerobically degraded, fermented, and converted to methane gas from organic acids such as acetic acid and butyric acid.

  19. Hydrodynamic chronoamperometry for probing kinetics of anaerobic microbial metabolism - case study of Faecalibacterium prausnitzii

    Science.gov (United States)

    Prévoteau, Antonin; Geirnaert, Annelies; Arends, Jan B. A.; Lannebère, Sylvain; van de Wiele, Tom; Rabaey, Korneel

    2015-07-01

    Monitoring in vitro the metabolic activity of microorganisms aids bioprocesses and enables better understanding of microbial metabolism. Redox mediators can be used for this purpose via different electrochemical techniques that are either complex or only provide non-continuous data. Hydrodynamic chronoamperometry using a rotating disc electrode (RDE) can alleviate these issues but was seldom used and is poorly characterized. The kinetics of Faecalibacterium prausnitzii A2-165, a beneficial gut microbe, were determined using a RDE with riboflavin as redox probe. This butyrate producer anaerobically ferments glucose and reduces riboflavin whose continuous monitoring on a RDE provided highly accurate kinetic measurements of its metabolism, even at low cell densities. The metabolic reaction rate increased linearly over a broad range of cell concentrations (9 × 104 to 5 × 107 cells.mL-1). Apparent Michaelis-Menten kinetics was observed with respect to riboflavin (KM = 6 μM kcat = 5.3×105 s-1, at 37 °C) and glucose (KM = 6 μM kcat = 2.4 × 105 s-1). The short temporal resolution allows continuous monitoring of fast cellular events such as kinetics inhibition with butyrate. Furthermore, we detected for the first time riboflavin reduction by another potential probiotic, Butyricicoccus pullicaecorum. The ability of the RDE for fast, accurate, simple and continuous measurements makes it an ad hoc tool for assessing bioprocesses at high resolution.

  20. MICROBIAL TRANSFORMATIONS OF RADIONUCLIDES AND ENVIRONMENTAL RESTORATION THROUGH BIOREMEDIATION.

    Energy Technology Data Exchange (ETDEWEB)

    FRANCIS, A.J.

    2006-09-29

    Treatment of waste streams containing radionuclides, the remediation of contaminated materials, soils, and water, and the safe and economical disposal of radionuclides and toxic metals containing wastes is a major concern. Radionuclides may exist in various oxidation states and may be present as oxide, coprecipitates, inorganic, and organic complexes depending on the process and waste stream. Unlike organic contaminants, the metals cannot be destroyed, but must either be converted to a stable form or removed. Microorganisms present in the natural environment play a major role in the mobilization and immobilization of radionuclides and toxic metals by direct enzymatic or indirect non-enzymatic actions and could affect the chemical nature of the radionuclides by altering the speciation, solubility and sorption properties and thus could increase or decrease the concentrations of radionuclides in solution. Fundamental understanding of the mechanisms of microbiological transformations of various chemical forms of uranium present in wastes and contaminated soils and water has led to the development of novel bioremediation processes. One process uses anaerobic bacteria to stabilize the radionuclides by reductive precipitation from higher to lower oxidation state with a concurrent reduction in volume due to the dissolution and removal of nontoxic elements from the waste matrix. In an another process, uranium and other toxic metals are removed from contaminated surfaces, soils, and wastes by extracting with the chelating agent citric acid. Uranium is recovered from the citric acid extract after biodegradation followed by photodegradation in a concentrated form as UO{sub 3} {center_dot} 2H{sub 2}O for recycling or appropriate disposal. These processes use all naturally occurring materials, common soil bacteria, naturally occurring organic compound citric acid and sunlight.

  1. The effect of enzymatic pre-hydrolysis of dairy wastewater on the granular and immobilized microbial community in anaerobic bioreactors.

    Science.gov (United States)

    Cammarota, Magali C; Rosa, Daniela R; Duarte, Iolanda C S; Saavedra, Nora K; Varesche, Maria B A; Zaiat, Marcelo; Freire, Denise M G

    2013-01-01

    The effect of a lipase-rich enzyme preparation produced by the fungus Penicillium sp. on solid-state fermentation was evaluated in two anaerobic bioreactors (up-flow anaerobic sludge blanket (UASB) and horizontal-flow anaerobic immobilized biomass (HAIB)) treating dairy wastewater with 1200 mg oil and grease/L. The oil and grease hydrolysis step was carried out with 0.1% (w/v) of the solid enzymatic preparation at 30 degrees C for 24 h. This resulted in a final concentration of free acids eight times higher than the initial value. The bioreactors operated at 30 degrees C with hydraulic retention times of 12 h (HAIB) and 20 h (UASB) for a period of 430 days, and had high chemical oxygen demand (COD) removal efficiencies (around 90%) when fed with pre-hydrolyzed wastewater. There was, however, an increase in the effluent oil and grease concentration (from values as low as 17 mg/L to values above 150 mg/L in the UASB bioreactor, and from 38-242 mg/L in the HAIB bioreactor), and oil and grease accumulation in the biomass throughout the operational period (the oil and grease content reached 1.7 times that found in the inoculum of the UASB bioreactor). The HAIB bioreactor gave better results because the support for biomass immobilization acted as a filter, retaining oil and grease at the entry of the bioreactor. The molecular analysis of the Bacteria and Archaea domains revealed significant differences in the microbial profiles in experiments conducted with and without the pre-hydrolysis step. The differences observed in the overall parameters could be related to the microbial diversity of the anaerobic sludge. PMID:23530355

  2. Assessing the influence of physical, geochemical and biological factors on anaerobic microbial primary productivity within hydrothermal vent chimneys.

    Science.gov (United States)

    Olins, H C; Rogers, D R; Frank, K L; Vidoudez, C; Girguis, P R

    2013-05-01

    Chemosynthetic primary production supports hydrothermal vent ecosystems, but the extent of that productivity and its governing factors have not been well constrained. To better understand anaerobic primary production within massive vent deposits, we conducted a series of incubations at 4, 25, 50 and 90 °C using aggregates recovered from hydrothermal vent structures. We documented in situ geochemistry, measured autochthonous organic carbon stable isotope ratios and assessed microbial community composition and functional gene abundances in three hydrothermal vent chimney structures from Middle Valley on the Juan de Fuca Ridge. Carbon fixation rates were greatest at lower temperatures and were comparable among chimneys. Stable isotope ratios of autochthonous organic carbon were consistent with the Calvin-Benson-Bassham cycle being the predominant mode of carbon fixation for all three chimneys. Chimneys exhibited marked differences in vent fluid geochemistry and microbial community composition, with structures being differentially dominated by gamma (γ) or epsilon (ε) proteobacteria. Similarly, qPCR analyses of functional genes representing different carbon fixation pathways showed striking differences in gene abundance among chimney structures. Carbon fixation rates showed no obvious correlation with observed in situ vent fluid geochemistry, community composition or functional gene abundance. Together, these data reveal that (i) net anaerobic carbon fixation rates among these chimneys are elevated at lower temperatures, (ii) clear differences in community composition and gene abundance exist among chimney structures, and (iii) tremendous spatial heterogeneity within these environments likely confounds efforts to relate the observed rates to in situ microbial and geochemical factors. We also posit that microbes typically thought to be mesophiles are likely active and growing at cooler temperatures, and that their activity at these temperatures comprises the

  3. Study of the diversity of microbial communities in a sequencing batch reactor oxic-settling-anaerobic process and its modified process.

    Science.gov (United States)

    Sun, Lianpeng; Chen, Jianfan; Wei, Xiange; Guo, Wuzhen; Lin, Meishan; Yu, Xiaoyu

    2016-05-01

    To further reveal the mechanism of sludge reduction in the oxic-settling-anaerobic (OSA) process, the polymerase chain reaction - denaturing gradient gel electrophoresis protocol was used to study the possible difference in the microbial communities between a sequencing batch reactor (SBR)-OSA process and its modified process, by analyzing the change in the diversity of the microbial communities in each reactor of both systems. The results indicated that the structure of the microbial communities in aerobic reactors of the 2 processes was very different, but the predominant microbial populations in anaerobic reactors were similar. The predominant microbial population in the aerobic reactor of the SBR-OSA belonged to Burkholderia cepacia, class Betaproteobacteria, while those of the modified process belonged to the classes Alphaproteobacteria, Betaproteobacteria, and Gammaproteobacteria. These 3 types of microbes had a cryptic growth characteristic, which was the main cause of a greater sludge reduction efficiency achieved by the modified process. PMID:27021584

  4. Transformation of carbon tetrachloride in an anaerobic packed-bed reactor without addition of another electron donor

    NARCIS (Netherlands)

    Best, J.H. de; Hunneman, P.; Doddema, H.J.; Janssen, D.B.; Harder, W.

    1999-01-01

    Carbon tetrachloride (52 μM) was biodegraded for more than 72% in an anaerobic packed-bed reactor without addition of an external electron donor. The chloride mass balance demonstrated that all carbon tetrachloride transformed was completely dechlorinated. Chloroform and dichloromethane were sometim

  5. Performance of biological phosphorus removal and characteristics of microbial community in the oxic-settling-anaerobic process by FISH analysis

    Institute of Scientific and Technical Information of China (English)

    Jian-fang WANG; Qing-liang ZHAO; Wen-biao JIN; Shi-jie YOU; Jin-na ZHANG

    2008-01-01

    Performance of biological phosphorus removal in the oxic-settling-anaerobic (OSA) process was investigated. Cell staining and fluorescent in situ hybridization (FISH) were used to analyze characteristics and microbial community of sludge.Experimental results showed that phosphorus removal efficiency was near 60% and the amount of biological phosphorus accumulation in aerobic sludge of the OSA system was up to 26.9 mg/g. Biological phosphorus removal efficiency was partially inhibited by carbon sources in the continuous OSA system. Contrasted to the OSA system, biological phosphorus removal efficiency was enhanced by 14% and the average total phosphorus (TP) contents of aerobic sludge were increased by 0.36 mg/g when sufficient carbon sources were supplied in batch experiments. Staining methods indicated that about 35% of microorganisms had typical characteristics of phosphorus accumulating organisms (PAOs). FISH analysis demonstrated that PAOMIX-binding bacteria were predominant microbial communities in the OSA system, which accounted for around 28% of total bacteria.

  6. Effects of Oxytetracycline on Methane Production and the Microbial Communities During Anaerobic Digestion of Cow Manure

    Institute of Scientific and Technical Information of China (English)

    KE Xin; WANG Chun-yong; LI Run-dong; ZHANG Yun

    2014-01-01

    The effects of different concentrations of oxytetracycline (OTC) on the dynamics of bacterial and archaeal communities during the mesophilic anaerobic digestion (37°C) of cow manure were investigated. Before anaerobic digestion, OTC was added to digesters at concentrations of 20, 50, and 80 mg L-1, respectively. Compared with no-antibiotic control, all methane productions underwent different levels of inhibition at different concentrations of OTC. Changes in the bacterial and archaeal communities were discussed by using PCR-denaturing gradient gel electrophoresis (DGGE). Results showed that OTC affected the richness and diversity of bacterial and archaeal communities. The bacterial genus Flavobacterium and an uncultured bacterium (JN256083.1) were detected throughout the entire process of anaerobic digestion and seemed to be the functional bacteria. Methanobrevibacter boviskoreani and an uncultured archaeon (FJ230982.1) dominated the archaeal communities during anaerobic digestion. These microorganisms may have high resistance to OTC and may play vital roles in methane production.

  7. Medium factors on anaerobic production of rhamnolipids by Pseudomonas aeruginosa SG and a simplifying medium for in situ microbial enhanced oil recovery applications.

    Science.gov (United States)

    Zhao, Feng; Zhou, Jidong; Han, Siqin; Ma, Fang; Zhang, Ying; Zhang, Jie

    2016-04-01

    Aerobic production of rhamnolipid by Pseudomonas aeruginosa was extensively studied. But effect of medium composition on anaerobic production of rhamnolipid by P. aeruginosa was unknown. A simplifying medium facilitating anaerobic production of rhamnolipid is urgently needed for in situ microbial enhanced oil recovery (MEOR). Medium factors affecting anaerobic production of rhamnolipid were investigated using P. aeruginosa SG (Genbank accession number KJ995745). Medium composition for anaerobic production of rhamnolipid by P. aeruginosa is different from that for aerobic production of rhamnolipid. Both hydrophobic substrate and organic nitrogen inhibited rhamnolipid production under anaerobic conditions. Glycerol and nitrate were the best carbon and nitrogen source. The commonly used N limitation under aerobic conditions was not conducive to rhamnolipid production under anaerobic conditions because the initial cell growth demanded enough nitrate for anaerobic respiration. But rhamnolipid was also fast accumulated under nitrogen starvation conditions. Sufficient phosphate was needed for anaerobic production of rhamnolipid. SO4(2-) and Mg(2+) are required for anaerobic production of rhamnolipid. Results will contribute to isolation bacteria strains which can anaerobically produce rhamnolipid and medium optimization for anaerobic production of rhamnolipid. Based on medium optimization by response surface methodology and ions composition of reservoir formation water, a simplifying medium containing 70.3 g/l glycerol, 5.25 g/l NaNO3, 5.49 g/l KH2PO4, 6.9 g/l K2HPO4·3H2O and 0.40 g/l MgSO4 was designed. Using the simplifying medium, 630 mg/l of rhamnolipid was produced by SG, and the anaerobic culture emulsified crude oil to EI24 = 82.5 %. The simplifying medium was promising for in situ MEOR applications. PMID:26925616

  8. Microbial anaerobic methane cycling in the subseafloor at the Von Damm hydrothermal vent field, Mid-Cayman Rise

    Science.gov (United States)

    Huber, J. A.; Reveillaud, J. C.; Stepanauskas, R.; McDermott, J. M.; Sylva, S. P.; Seewald, J.

    2013-12-01

    The Mid-Cayman Rise (MCR) is Earth's deepest and slowest spreading mid-ocean ridge located in the western Caribbean. With an axial rift valley floor at a depth of ~4200-6500 m, it represents one of the deepest sections of ridge crest worldwide. In 2009, the world's deepest hydrothermal vents (Piccard at 4960 m) and an ultramafic-influenced system only 20 km away on top of an oceanic core complex (Von Damm at 2350 m) were discovered along the MCR. Each site is hosted in a distinct geologic setting with different thermal and chemical regimes. The Von Damm site is a particularly interesting location to examine chemolithoautotrophic subseafloor microbial communities due to the abundant hydrogen, methane, and organic compounds in the venting fluids. Here, we used a combination of stable isotope tracing, next-generation sequencing, and single cell techniques to determine the identity, activity, and genomic repertoire of subseafloor anaerobic archaea involved in methane cycling in hydrothermal fluids venting at the Von Damm site. Molecular sequencing of phylogenetic marker genes revealed the presence of diverse archaea that both generate and consume methane across a geochemical and thermal spectrum of vents. Stable isotope tracing experiments were used to detect biological utilization of formate and dissolved inorganic carbon, and methane generation at 70 °C under anaerobic conditions. Results indicate that methanogenesis with formate as a substrate is occurring at 70 °C at two Von Damm sites, Ginger Castle and the Main Orifice. The results are consistent with thermodynamic predictions for carbon speciation at the temperatures encountered at the ultramafic-hosted Von Damm, where formate is predicted to be thermodynamically stable, and may thus serve as a an important source of carbon. Diverse thermophilic methanogenic archaea belonging to the genera Methanothermococcus were detected at all vent sites with both 16S rRNA tag sequencing and single cell sorting. Other

  9. Anaerobic carbon monoxide dehydrogenase diversity in the homoacetogenic hindgut microbial communities of lower termites and the wood roach.

    Directory of Open Access Journals (Sweden)

    Eric G Matson

    Full Text Available Anaerobic carbon monoxide dehydrogenase (CODH is a key enzyme in the Wood-Ljungdahl (acetyl-CoA pathway for acetogenesis performed by homoacetogenic bacteria. Acetate generated by gut bacteria via the acetyl-CoA pathway provides considerable nutrition to wood-feeding dictyopteran insects making CODH important to the obligate mutualism occurring between termites and their hindgut microbiota. To investigate CODH diversity in insect gut communities, we developed the first degenerate primers designed to amplify cooS genes, which encode the catalytic (β subunit of anaerobic CODH enzyme complexes. These primers target over 68 million combinations of potential forward and reverse cooS primer-binding sequences. We used the primers to identify cooS genes in bacterial isolates from the hindgut of a phylogenetically lower termite and to sample cooS diversity present in a variety of insect hindgut microbial communities including those of three phylogenetically-lower termites, Zootermopsis nevadensis, Reticulitermes hesperus, and Incisitermes minor, a wood-feeding cockroach, Cryptocercus punctulatus, and an omnivorous cockroach, Periplaneta americana. In total, we sequenced and analyzed 151 different cooS genes. These genes encode proteins that group within one of three highly divergent CODH phylogenetic clades. Each insect gut community contained CODH variants from all three of these clades. The patterns of CODH diversity in these communities likely reflect differences in enzyme or physiological function, and suggest that a diversity of microbial species participate in homoacetogenesis in these communities.

  10. Enrichment of a microbial community performing anaerobic oxidation of methane in a continuous high-pressure bioreactor

    Directory of Open Access Journals (Sweden)

    Wang Fengping

    2011-06-01

    Full Text Available Abstract Background Anaerobic oxidation of methane coupled to sulphate reduction (SR-AOM prevents more than 90% of the oceanic methane emission to the atmosphere. In a previous study, we demonstrated that the high methane pressure (1, 4.5, and 8 MPa stimulated in vitro SR-AOM activity. However, the information on the effect of high-pressure on the microbial community structure and architecture was still lacking. Results In this study we analysed the long-term enrichment (286 days of this microbial community, which was mediating SR-AOM in a continuous high-pressure bioreactor. 99.7% of the total biovolume represented cells in the form of small aggregates (diameter less then 15 μm. An increase of the total biovolume was observed (2.5 times. After 286 days, the ANME-2 (anaerobic methanotrophic archaea subgroup 2 and SRB (sulphate reducing bacteria increased with a factor 12.5 and 8.4, respectively. Conclusion This paper reports a net biomass growth of communities involved in SR-AOM, incubated at high-pressure.

  11. Numerical Simulation of the Anaerobic Transformation of Tetrachloroethene to cis-Dichloroethene in a Continuous Flow Aquifer Column

    Science.gov (United States)

    Mustafa, N.; Azizian, M.; Dolan, M.; Semprini, L.

    2007-12-01

    The anaerobic reductive dechlorination of tetrachloroethene (PCE) to cis-dichloroethene (c-DCE) in a laboratory column study was numerically simulated and compared with experimental observations. The column study was conducted with continuous flow and injection of PCE in synthetic groundwater. The column was packed with aquifer solids from the Hanford DOE site and bioaugmented with the Evanite (EV) dechlorinating enrichment culture. After the column was bioaugmented and fed lactate as an electron donor, c-DCE concentrations in the column effluent exceeded the influent PCE concentration. This high c-DCE concentration resulted from enhanced PCE desorption and transformation. A 1-D reactive transport model was developed that included the processes of dispersion, advection, rate-limited sorption and desorption, reductive dechlorination kinetics with competitive inhibition and microbial growth and decay. The model was validated by mass balances, comparisons with analytical solutions and batch kinetic models. Previously determined kinetic and inhibition constants for the EV culture of Yu and Semprini (2004) were input into the model simulations. Initial biomass concentration was assumed to be exponentially distributed along the column. The sorption parameters including the aquifer: water distribution coefficients (Kds) and first-order mass transfer coefficients for PCE, trichloroethene (TCE), and c-DCE were determined in batch laboratory studies. The system of model equations was solved numerically using COMSOL 3.3, which employs finite-element methods. The reactive transport model successfully simulated the initial results of continuous flow column experiment. The increase in c-DCE above the influent PCE concentration was simulated and TCE was shown not to accumulate in the column effluent. The simulations showed that microbial kinetic values generated in previous studies and the sorption parameters generated in batch tests, when used in a transport model, did a

  12. Bioaugmentation of anaerobic sludge digestion with iron-reducing bacteria: process and microbial responses to variations in hydraulic retention time.

    Science.gov (United States)

    Baek, Gahyun; Kim, Jaai; Shin, Seung Gu; Lee, Changsoo

    2016-01-01

    Although anaerobic digestion (AD) is a widely used option to manage waste activated sludge (WAS), there are some drawbacks related to its slow reaction rate and low energy productivity. This study examined an anaerobic WAS digester, augmented with an iron-reducing microbial consortium, relative to changes in microbial community structure and process performance at decreasing hydraulic retention times (HRTs) of 20 to 10 days. The enhanced methanation performance (approximately 40 % increase in methane yield) by the bioaugmentation was sustained until the HRT was decreased to 12.5 days, under Fe(3+)-rich conditions (ferric oxyhydroxide, 20 mM Fe). Enhanced iron-reducing activity was evidenced by the increased Fe(2+) to total Fe ratio maintained above 50 % during the stable operational phases. A further decrease in HRT to 10 days resulted in a significant performance deterioration, along with a drop in the Fe(2+) to total Fe ratio to <35 %, after four turnovers of operation. Prevailing existence of putative iron-reducing bacteria (IRBs) was identified by denaturing gradient gel electrophoresis (DGGE), with Spirochaetaceae- and Thauera-related organisms being dominant members, and clear dominance shifts among them with respect to decrease in HRT were observed. Lowering HRT led to evident shifts in bacterial community structure likely associated with washout of IRBs, leading to decreases in iron respiration activity and AD performance at a lower HRT. The bacterial community structure shifted dynamically over phases, and the community transitions correlated well with the changes in process performance. Overall, the combined biostimulation and bioaugmentation investigated in this study proved effective for enhanced methane recovery from anaerobic WAS digestion, which suggests an interesting potential for high-rate AD. PMID:26428233

  13. Genetic transformation of an obligate anaerobe, P. gingivalis for FMN-green fluorescent protein expression in studying host-microbe interaction.

    Directory of Open Access Journals (Sweden)

    Chul Hee Choi

    Full Text Available The recent introduction of "oxygen-independent" flavin mononucleotide (FMN-based fluorescent proteins (FbFPs is of major interest to both eukaryotic and prokaryotic microbial biologists. Accordingly, we demonstrate for the first time that an obligate anaerobe, the successful opportunistic pathogen of the oral cavity, Porphyromonas gingivalis, can be genetically engineered for expression of the non-toxic green FbFP. The resulting transformants are functional for studying dynamic bacterial processes in living host cells. The visualization of the transformed P. gingivalis (PgFbFP revealed strong fluorescence that reached a maximum emission at 495 nm as determined by fluorescence microscopy and spectrofluorometry. Human primary gingival epithelial cells (GECs were infected with PgFbFP and the bacterial invasion of host cells was analyzed by a quantitative fluorescence microscopy and antibiotic protection assays. The results showed similar levels of intracellular bacteria for both wild type and PgFbFP strains. In conjunction with organelle specific fluorescent dyes, utilization of the transformed strain provided direct and accurate determination of the live/metabolically active P. gingivalis' trafficking in the GECs over time. Furthermore, the GECs were co-infected with PgFbFP and the ATP-dependent Clp serine protease-deficient mutant (ClpP- to study the differential fates of the two strains within the same host cells. Quantitative co-localization analyses displayed the intracellular PgFbFP significantly associated with the endoplasmic reticulum network, whereas the majority of ClpP- organisms trafficked into the lysosomes. Hence, we have developed a novel and reliable method to characterize live host cell-microbe interactions and demonstrated the adaptability of FMN-green fluorescent protein for studying persistent host infections induced by obligate anaerobic organisms.

  14. A Two-Stage Microbial Fuel Cell and Anaerobic Fluidized Bed Membrane Bioreactor (MFC-AFMBR) System for Effective Domestic Wastewater Treatment

    OpenAIRE

    Ren, Lijiao; Ahn, Yongtae; Logan, Bruce E.

    2014-01-01

    Microbial fuel cells (MFCs) are a promising technology for energy-efficient domestic wastewater treatment, but the effluent quality has typically not been sufficient for discharge without further treatment. A two-stage laboratory-scale combined treatment process, consisting of microbial fuel cells and an anaerobic fluidized bed membrane bioreactor (MFC-AFMBR), was examined here to produce high quality effluent with minimal energy demands. The combined system was operated continuously for 50 d...

  15. Role of live microbial feed supplements with reference to anaerobic fungi in ruminant productivity:A review

    Institute of Scientific and Technical Information of China (English)

    Anil K Puniya; Ravinder Kumar; Abdelfattah Z M Salem; Sanjay Kumar; Sumit S Dagar; Gareth W Grififth; Monica Puniya; Sreenivas R Ravella; Nikhil Kumar; Tejpal Dhewa

    2015-01-01

    To keep the concept of a safe food supply to the consumers, animal feed industries world over are showing an increasing interest in the direct-fed microbials (DFM) for improved animal performance in terms of growth or productivity. This becomes al the more essential in a situation, where a number of the residues of antibiotics and/or other growth stimulants reach in milk and meat with a number of associated potential risks for the consumers. Hence, in the absence of growth stimulants, a positive manipulation of the rumen microbial ecosystem to enhance the feedstuff utilization for improved production ef-ifciency by ruminants has become of much interest to the researchers and entrepreneurs. A few genera of live microbes (i.e., bacteria, fungi and yeasts in different types of formulations from paste to powder) are infrequently used as DFM for the domestic ruminants. These DFM products are live microbial feed supplements containing natural y occurring microbes in the rumen. Among different DFM possibilities, anaerobic rumen fungi (ARF) based additives have been found to improve ruminant productivity consistently during feeding trials. Administration of ARF during the few trials conducted, led to the increased weight gain, milk production, and total tract digestibility of feed components in ruminants. Anaerobic fungi in the rumen display very strong cel-wal degrading cel ulolytic and xylanolytic activities through rhizoid development, resulting in the physical disruption of feed structure paving the way for bacterial action. Signiifcant improvements in the ifber digestibil-ity were found to coincide with increases in ARF in the rumen indicating their role. Most of the researches based on DFM have indicated a positive response in nutrient digestion and methane reducing potential during in vivo and/or in vitro sup-plementation of ARF as DFM. Therefore, DFM especial y ARF wil gain popularity but it is necessary that al the strains are thoroughly studied for their

  16. Reductive transformation and detoxification mechanism of 2,4-dinitrochlorobenzene in combined zero valent iron and anaerobic-aerobic process

    Institute of Scientific and Technical Information of China (English)

    Jinyou Shen; Zongyuan Zhou; Changjin Ou; Xiuyun Sun; Jiansheng Li; Weiqing Han; Lin Zhou; Lianjun Wang

    2012-01-01

    A combined zero valent iron (ZVI) and anaerobic-aerobic process was adopted for the treatment of 2,4-dinitrochlorobenzene (DNCB)-containing wastewater.The transformation pathway,reduction of acute toxicity and enhancement of biodegradability were investigated.After pretreatment by ZVI,DNCB in wastewater could be completely converted into 2,4-diaminochlorobenzene (DACB).The ratio of BOD5/COD increased from 0.005 ± 0.001 to 0.168 ± 0.007,while EC50,48 hr (V/V) increased from 0.65% to 5.20%,indicating the enhancement of biodegradability and reduction of acute toxicity with the pretreatment by ZVI.DACB was further dechlorinated to m-phenylenediamine during the anaerobic process using methanol as electron donor,with EC50,48 hr increasing from 5.20% to 48.2%.After the subsequent anaerobic-aerobic process,m-phenylenediamine was degraded completely,with effluent COD of 67.5 ± 10.8 mg/L.This effluent of the subsequent anaerobic-aerobic process was not toxic to zebrafish.The combined ZVI and anaerobic-aerobic process offers bright prospects for the treatment of chlorinated nitroaromatic compound-containing wastewater.

  17. Iron oxides stimulate microbial monochlorobenzene in situ transformation in constructed wetlands and laboratory systems.

    Science.gov (United States)

    Schmidt, Marie; Wolfram, Diana; Birkigt, Jan; Ahlheim, Jörg; Paschke, Heidrun; Richnow, Hans-Hermann; Nijenhuis, Ivonne

    2014-02-15

    Natural wetlands are transition zones between anoxic ground and oxic surface water which may enhance the (bio)transformation potential for recalcitrant chloro-organic contaminants due to the unique geochemical conditions and gradients. Monochlorobenzene (MCB) is a frequently detected groundwater contaminant which is toxic and was thought to be persistent under anoxic conditions. Furthermore, to date, no degradation pathways for anoxic MCB removal have been proven in the field. Hence, it is important to investigate MCB biodegradation in the environment, as groundwater is an important drinking water source in many European countries. Therefore, two pilot-scale horizontal subsurface-flow constructed wetlands, planted and unplanted, were used to investigate the processes in situ contributing to the biotransformation of MCB in these gradient systems. The wetlands were fed with anoxic MCB-contaminated groundwater from a nearby aquifer in Bitterfeld, Germany. An overall MCB removal was observed in both wetlands, whereas just 10% of the original MCB inflow concentration was detected in the ponds. In particular in the gravel bed of the planted wetland, MCB removal was highest in summer season with 73 ± 9% compared to the unplanted one with 40 ± 5%. Whereas the MCB concentrations rapidly decreased in the transition zone of unplanted gravel to the pond, a significant MCB removal was already determined in the anoxic gravel bed of the planted system. The investigation of hydro-geochemical parameters revealed that iron and sulphate reduction were relevant redox processes in both wetlands. In parallel, the addition of ferric iron or nitrate stimulated the mineralisation of MCB in laboratory microcosms with anoxic groundwater from the same source, indicating that the potential for anaerobic microbial degradation of MCB is present at the field site. PMID:24291561

  18. Illuminating Anaerobic Microbial Community and Cooccurrence Patterns across a Quality Gradient in Chinese Liquor Fermentation Pit Muds.

    Science.gov (United States)

    Hu, Xiaolong; Du, Hai; Ren, Cong; Xu, Yan

    2016-04-15

    Fermentation pit mud, an important reservoir of diverse anaerobic microorganisms, is essential for Chinese strong-aroma liquor production. Pit mud quality, according to its sensory characteristics, can be divided into three grades: degraded, normal, and high quality. However, the relationship between pit mud microbial community and pit mud quality is poorly understood, as are microbial associations within the pit mud ecosystem. Here, microbial communities at these grades were compared using Illumina MiSeq sequencing of the variable region V4 of the 16S rRNA gene. Our results revealed that the pit mud microbial community was correlated with its quality and environmental factors. Species richness, biodiversity, and relative and/or absolute abundances ofClostridia,Clostridium kluyveri,Bacteroidia, andMethanobacteriasignificantly increased, with corresponding increases in levels of pH, NH4 (+), and available phosphorus, from degraded to high-quality pit muds, while levels ofLactobacillus, dissolved organic carbon, and lactate significantly decreased, with normal samples in between. Furthermore, 271 pairs of significant and robust correlations (cooccurrence and negative) were identified from 76 genera using network analysis. Thirteen hubs of cooccurrence patterns, mainly under theClostridia,Bacteroidia,Methanobacteria, andMethanomicrobia, may play important roles in pit mud ecosystem stability, which may be destroyed with rapidly increased levels of lactic acid bacteria (Lactobacillus,Pediococcus, andStreptococcus). This study may help clarify the relationships among microbial community, environmental conditions, and pit mud quality, allow the improvement of pit mud quality by using bioaugmentation and controlling environmental factors, and shed more light on the ecological rules guiding community assembly in pit mud. PMID:26896127

  19. Kinetics of Fe(II)-catalyzed transformation of 6-line ferrihydrite under anaerobic flow conditions

    Energy Technology Data Exchange (ETDEWEB)

    Yang, L.; Steefel, C.I.; Marcus, M.A.; Bargar, J.R.

    2010-04-01

    The readsorption of ferrous ions produced by the abiotic and microbially-mediated reductive dissolution of iron oxy-hydroxides drives a series of transformations of the host minerals. To further understand the mechanisms by which these transformations occur and their kinetics within a microporous flow environment, flow-through experiments were conducted in which capillary tubes packed with ferrihydrite-coated glass spheres were injected with inorganic Fe(II) solutions under circumneutral pH conditions at 25 C. Synchrotron X-ray diffraction was used to identify the secondary phase(s) formed and to provide data for quantitative kinetic analysis. At concentrations at and above 1.8 mM Fe(II) in the injection solution, magnetite was the only secondary phase formed (no intermediates were detected), with complete transformation following a nonlinear rate law requiring 28 hours and 150 hours of reaction at 18 and 1.8 mM Fe(II), respectively. However, when the injection solution consisted of 0.36 mM Fe(II), goethite was the predominant reaction product and formed much more slowly according to a linear rate law, while only minor magnetite was formed. When the rates are normalized based on the time to react half of the ferrihydrite on a reduced time plot, it is apparent that the 1.8 mM and 18 mM input Fe(II) experiments can be described by the same reaction mechanism, while the 0.36 input Fe(II) experiment is distinct. The analysis of the transformation kinetics suggest that the transformations involved an electron transfer reaction between the aqueous as well as sorbed Fe(II) and ferrihydrite acting as a semiconductor, rather than a simple dissolution and recrystallization mechanism. A transformation mechanism involving sorbed inner sphere Fe(II) alone is not supported, since the essentially equal coverage of sorption sites in the 18 mM and 1.8 mM Fe(II) injections cannot explain the difference in the transformation rates observed.

  20. Anaerobic digestion for simultaneous sewage sludge treatment and CO biomethanation: process performance and microbial ecology

    DEFF Research Database (Denmark)

    Luo, Gang; Wang, Wen; Angelidaki, Irini

    2013-01-01

    in an anaerobic reactor was presented. Batch experiments showed that CO was inhibitory to methanogens, but not to bacteria, at CO partial pressure between 0.25 and 1 atm under thermophilic conditions. During anaerobic digestion of sewage sludge supplemented with CO added through a hollow fiber...... membrane (HFM) module in continuous thermophilic reactors, CO did not inhibit the process even at a pressure as high as 1.58 atm inside the HFM, due to the low dissolved CO concentration in the liquid. Complete consumption of CO was achieved with CO gas retention time of 0.2 d. Results from high...

  1. Characterization of sulfide-oxidizing microbial mats developed inside a full-scale anaerobic digester employing biological desulfurization.

    Science.gov (United States)

    Kobayashi, Takuro; Li, Yu-You; Kubota, Kengo; Harada, Hideki; Maeda, Takeki; Yu, Han-Qing

    2012-01-01

    The microbial mats responsible for biological desulfurization from biogas in a full-scale anaerobic digester were characterized in terms of their structure, as well as their chemical and microbial properties. Filament-shaped elemental sulfur 100-500 μm in length was shown to cover the mats, which cover the entire headspace of the digester. This is the first report on filamentous sulfur production in a non-marine environment. The results of the analysis of the mats suggest that the key players in the sulfide oxidation and sulfur production in the bio-desulfurization in the headspace of the digester were likely to be two sulfide-oxidizing bacteria (SOB) species related to Halothiobacillus neapolitanus and Sulfurimonas denitrificans, and that the microbial community, cell density, activity for sulfide oxidation varied according to the environmental conditions at the various locations of the mats. Since the water and nutrients necessary for the SOB were provided by the digested sludge droplets deposited on the mats, and our results show that a higher rate of sulfide oxidation occurred with more frequent digested sludge deposition, the habitat of the SOB needs to be made in the lower part of the headspace near the liquid level of the digested sludge to maintain optimal conditions. PMID:21735263

  2. An innovative bioelectrochemical-anaerobic digestion-coupled system for in-situ ammonia recovery and biogas enhancement: process performance and microbial ecology

    DEFF Research Database (Denmark)

    Zhang, Yifeng; Angelidaki, Irini

    Ammonia (NH4+/NH3) inhibition during anaerobic digestion process is one of the most frequent problems existing in biogas plants, resulting in unstable process and reduced biogas production. In this study, we developed a novel hybrid system, consisted of a submersed microbial resource recovery cell...

  3. Comparative performance and microbial community of single-phase and two-phase anaerobic systems co-digesting cassava pulp and pig manure

    DEFF Research Database (Denmark)

    Panichnumsin, P.; Ahring, B.K.; Nopharatana, A.;

    2010-01-01

    In this study, we illustrated the performance and microbial community of single- and two-phase systems anaerobically co-digesting cassava pulp and pig manure. The results showed that the volatile solid reduction and biogas productivity of two-phase CSTR were 66 ± 4% and 2000 ± 210 ml l-1 d-1, while...

  4. Ultrasound-mediated DNA transformation in thermophilic gram-positive anaerobes.

    Directory of Open Access Journals (Sweden)

    Lu Lin

    Full Text Available BACKGROUND: Thermophilic, Gram-positive, anaerobic bacteria (TGPAs are generally recalcitrant to chemical and electrotransformation due to their special cell-wall structure and the low intrinsic permeability of plasma membranes. METHODOLOGY/PRINCIPAL FINDINGS: Here we established for any Gram-positive or thermophiles an ultrasound-based sonoporation as a simple, rapid, and minimally invasive method to genetically transform TGPAs. We showed that by applying a 40 kHz ultrasound frequency over a 20-second exposure, Texas red-conjugated dextran was delivered with 27% efficiency into Thermoanaerobacter sp. X514, a TGPA that can utilize both pentose and hexose for ethanol production. Experiments that delivered plasmids showed that host-cell viability and plasmid DNA integrity were not compromised. Via sonoporation, shuttle vectors pHL015 harboring a jellyfish gfp gene and pIKM2 encoding a Clostridium thermocellum β-1,4-glucanase gene were delivered into X514 with an efficiency of 6x10(2 transformants/µg of methylated DNA. Delivery into X514 cells was confirmed via detecting the kanamycin-resistance gene for pIKM2, while confirmation of pHL015 was detected by visualization of fluorescence signals of secondary host-cells following a plasmid-rescue experiment. Furthermore, the foreign β-1,4-glucanase gene was functionally expressed in X514, converting the host into a prototypic thermophilic consolidated bioprocessing organism that is not only ethanologenic but cellulolytic. CONCLUSIONS/SIGNIFICANCE: In this study, we developed an ultrasound-based sonoporation method in TGPAs. This new DNA-delivery method could significantly improve the throughput in developing genetic systems for TGPAs, many of which are of industrial interest yet remain difficult to manipulate genetically.

  5. Mechanism of anaerobic (microbial) corrosion. Technical summary report No. 1, 1 Jun-31 Dec 82

    Energy Technology Data Exchange (ETDEWEB)

    Iverson, W.P.; Olson, G.J.

    1982-12-01

    This report in the form of three papers describes research into the role of bacteria in anaerobic corrosion processes. During the year we have given more evidence for a novel mechanism of anaerobic corrosion in which a volatile, highly reactive phosporous compound is produced as a result of the activities of sulfate-reducing bacteria (Desulfovibio desuluricans). The corrosion product is an amorphous type of iron phosphide which can be detected by the formation of phosphine upon its acidification. Phosphine (in addition to H2S) has been detected from all the cases of suspected anaerobic corrosion (including tubercles from the inside of water pipes) examined so far. In examining the headspace over growing cultures of Desulfovibio to detect this volatile phosphorus containing compound, using a gas chromatograph (GC) with a flame photometric detector (FPD) specific for phosphorus and sulfur, two sulfur compounds, in addition to H2S, were detected and identified. These compounds, methylmercaptan, and dimethyldisulfide, were found to be relatively non-corrosive to iron under anaerobic conditions. No volatile phosphorus compounds were detected.

  6. Comparison of long-term performances and final microbial compositions of anaerobic reactors treating landfill leachate

    NARCIS (Netherlands)

    Calli, B.; Mertoglu, B.; Roest, C.; Inanc, B.

    2006-01-01

    Laboratory scale anaerobic upflow filter, sludge blanket and hybrid bed reactors were operated for 860 days in the treatment of high ammonia landfill leachate. Organic loading was gradually increased from 1.3 to 23.5 kg COD/m3 day in the start-up period and then fluctuated according to the COD conce

  7. Aerobic and anaerobic microbial activity in deep subsurface sediments from the Savannah River Plant

    International Nuclear Information System (INIS)

    Methanogenesis, sulfate reduction, and rates of carbon mineralization were determined for samples derived at different depths from four cores drilled at the Savannah River Plant, Aiken South Carolina. Three gram subsamples of the sediments were dispersed to 10-ml serum bottles under 5% H2 95% N2 and amended with 0.5 mL degassed distilled water with or without the following solutes: formate plus acetate, bicarbonate, lactate, and radiolabeled sulfate, glucose, and indole. After incubating 1 to 5 days, the sediments were assayed for methane, H2, 35S, and 14CO2. No methanogenesis was detected at any depth in any core and sulfate was rarely reduced. Evolution of 14CO2 from glucose and indole was detected in sediments as deep as 262 and 259 m, respectively. At some depths the 14CO2 evolution rate was comparable to that of surface soils; however, at other depths no 14CO2 evolution could be detected. Injection of sterile air into anaerobic incubations increased rates of carbon mineralization at all depths that had demonstrated anaerobic activity and stimulated mineralization activity in sediments that were inactive anaerobically, suggesting a predominance of aerobic metabolism. Increasing the concentration of added glucose and indole often increased the resulting rates of 14CO2 evolved from these substrates. The data indicate that both aerobic and anaerobic microorganisms are present and metabolically active in samples from deep subsurface environments. 16 refs., 3 figs

  8. Aerobic and anaerobic microbial degradation of crude (4-methylcyclohexyl)methanol in river sediments.

    Science.gov (United States)

    Yuan, Li; Zhi, Wei; Liu, Yangsheng; Smiley, Elizabeth; Gallagher, Daniel; Chen, Xi; Dietrich, Andrea; Zhang, Husen

    2016-03-15

    Cyclohexane and some of its derivatives have been a major concern because of their significant adverse human health effects and widespread occurrence in the environment. The 2014 West Virginia chemical spill has raised public attention to (4-methylcyclohexyl)methanol (4-MCHM), one cyclohexane derivative, which is widely used in coal processing but largely ignored. In particular, the environmental fate of its primary components, cis- and trans-4-MCHM, remains largely unexplored. This study aimed to investigate the degradation kinetics and mineralization of cis- and trans-4-MCHM by sediment microorganisms under aerobic and anaerobic conditions. We found the removal of cis- and trans-4-MCHM was mainly attributed to biodegradation with little contribution from sorption. A nearly complete aerobic degradation of 4-MCHM occurred within 14days, whereas the anaerobic degradation was reluctant with residual percentages of 62.6% of cis-4-MCHM and 85.0% of trans-4-MCHM after 16-day incubation. The cis-4-MCHM was degraded faster than the trans under both aerobic and anaerobic conditions, indicating an isomer-specific degradation could occur during the 4-MCHM degradation. Nitrate addition enhanced 4-MCHM mineralization by about 50% under both aerobic and anaerobic conditions. Both cis- and trans-4-MCHM fit well with the first-order kinetic model with respective degradation rates of 0.46-0.52 and 0.19-0.31day(-)(1) under aerobic condition. Respective degradation rates of 0.041-0.095 and 0.013-0.052day(-)(1) occurred under anaerobic condition. One bacterial strain capable of effectively degrading 4-MCHM isomers was isolated from river sediments and identified as Bacillus pumilus at the species level based on 16S rRNA gene sequence and 97% identity. Our findings will provide critical information for improving the prediction of the environmental fate of 4-MCHM and other cyclohexane derivatives with similar structure as well as enhancing the development of feasible treatment

  9. Impact of in-sewer transformation on 43 pharmaceuticals in a pressurized sewer under anaerobic conditions.

    Science.gov (United States)

    Jelic, Aleksandra; Rodriguez-Mozaz, Sara; Barceló, Damia; Gutierrez, Oriol

    2015-01-01

    The occurrence of 43 pharmaceuticals and 2 metabolites of ibuprofen was evaluated at the inlet and the outlet of a pressure sewer pipe in order to asses if in-sewer processes affect the pharmaceutical concentrations during their pass through the pipe. The target compounds were detected at concentrations ranging from low ng/L to a few μg/L, which are in the range commonly found in municipal wastewater of the studied area. The changes in concentrations between two sampling points were negligible for most compounds, i.e. from -10 to 10%. A higher decrease in concentrations (25-60 %) during the pass through the pipe was observed for diltiazem, citalopram, clarithromycin, bezafibrate and amlodipine. Negative removal was calculated for sulfamethoxazole (-66 ± 15%) and irbesartan (-58 ± 25%), which may be due to the conversion of conjugates back to their parent compounds in the sewer. The results show that microbial transformation of pharmaceuticals begins in sewer, albeit to different extents for different compounds. Therefore, the in-sewer transformation of pharmaceuticals should be assessed especially when their concentrations are used to estimate and refine the estimation of their per capita consumption in a catchment of interest in the sewage epidemiology approach. PMID:25462720

  10. Anaerobic co-digestion of biodiesel waste glycerin with municipal wastewater sludge: microbial community structure dynamics and reactor performance.

    Science.gov (United States)

    Razaviarani, Vahid; Buchanan, Ian D

    2015-04-01

    Two 10 L completely mixed reactors operating at 37°C and 20 days SRT were used to evaluate the relationships between reactor performance and microbial community dynamics during anaerobic co-digestion of biodiesel waste glycerin (BWG) with municipal wastewater sludge (MWS). The addition of up to 1.35% (v/v) BWG to reactor feeds yielded increased VS and COD removal together with enhanced the biogas production and methane yield. This represented 50% of the MWS feed COD. Pyrosequencing analysis showed Methanosaeta (acetoclastic) and Methanomicrobium (hydrogenotrophic) to be the methanogenic genera present in greatest diversity during stable reactor operation. Methanosaeta sequences predominated at the lowest BWG loading while those of Methanomicrobium were present in greatest abundance at the higher BWG loadings. Genus Candidatus cloacamonas was present in the greatest number of bacterial sequences at all loadings. Alkalinity, pH, biogas production and methane yield declined and VFA concentrations (especially propionate) increased during the highest BWG loading. PMID:25678409

  11. [Effect of Zn(II) on microbial activity in anaerobic acid mine drainage treatment system with biomass as carbon source].

    Science.gov (United States)

    Li, Shao-Jie; Chen, Tian-Hu; Zhou, Yue-Fei; Yue, Zheng-Bo; Jin, Jiez; Liu, Chang

    2012-01-01

    In this study, with rape straw as carbon source, anaerobic batch experiments were executed to investigate the effect of Zn (II) on the activity of sulphate reducing bacteria (SRB) in the microbial treatment of simulative acid mine drainage (AMD). The results showed that during the 60 experimental days, when initial Zn2+ concentrations were in the range of 73.7 to 196.8 mg x L(-1), SRB had high culturalbility. At the end of these experiments, pH values rose from initial 5.0 to neutral, about 96% of sulphate was reduced and the concentrations of Zn2+ reduced to 0.05 mg x L(-1). The results of Tessier sequential extraction, field emission scanning electron microscope (FE-SEM) and X-ray diffraction(XRD) showed that Zn was found to be fixed through forming organic and sulphide (mainly sphalerite) compounds. For the experiment with high Zn2+ concentration (262.97 mg x L(-1)), at the end of experiments, pH values dropped from initial 5.0 to 4.0, only 27% of sulphate was only reduced and the concentrations of Zn2+ kept in high range (25 mg x L(-1)), the activity of SRB significantly inhibited. This study indicated that: (1) Rape straw can be used as slow-release carbon source for long-term anaerobic AMD treatment; (2) Rape straw can decrease the toxicity of Zn2+ to SRB through adsorption; (3) In anaerobic AMD treatment system, Zn can be fixed by sulphide minerals with mediation of SRB. PMID:22452225

  12. Chronic exposure to triclosan sustains microbial community shifts and alters antibiotic resistance gene levels in anaerobic digesters.

    Science.gov (United States)

    Carey, Daniel E; Zitomer, Daniel H; Kappell, Anthony D; Choi, Melinda J; Hristova, Krassimira R; McNamara, Patrick J

    2016-08-10

    Triclosan, an antimicrobial chemical found in consumer personal care products, has been shown to stimulate antibiotic resistance in pathogenic bacteria. Although many studies focus on antibiotic resistance pertinent to medical scenarios, resistance developed in natural and engineered environments is less studied and has become an emerging concern for human health. In this study, the impacts of chronic triclosan (TCS) exposure on antibiotic resistance genes (ARGs) and microbial community structure were assessed in lab-scale anaerobic digesters. TCS concentrations from below detection to 2500 mg kg(-1) dry solids were amended into anaerobic digesters over 110 days and acclimated for >3 solid retention time values. Four steady state TCS concentrations were chosen (30-2500 mg kg(-1)). Relative abundance of mexB, a gene coding for a component of a multidrug efflux pump, was significantly higher in all TCS-amended digesters (30 mg kg(-1) or higher) relative to the control. TCS selected for bacteria carrying tet(L) and against those carrying erm(F) at concentrations which inhibited digester function; the pH decrease associated with digester failure was suspected to cause this selection. Little to no impact of TCS was observed on intI1 relative abundance. Microbial communities were also surveyed by high-throughput 16S rRNA gene sequencing. Compared to the control digesters, significant shifts in community structure towards clades containing commensal and pathogenic bacteria were observed in digesters containing TCS. Based on these results, TCS should be included in studies and risk assessments that attempt to elucidate relationships between chemical stressors (e.g. antibiotics), antibiotic resistance genes, and public health. PMID:27291499

  13. Microbial transformation of synthetic estrogen 17 alpha-ethinylestradiol

    Czech Academy of Sciences Publication Activity Database

    Cajthaml, Tomáš; Křesinová, Zdena; Svobodová, Kateřina; Sigler, Karel; Řezanka, Tomáš

    2009-01-01

    Roč. 157, č. 12 (2009), s. 3325-3335. ISSN 0269-7491 R&D Projects: GA MŠk LC06066; GA AV ČR KJB600200613 Institutional research plan: CEZ:AV0Z50200510 Keywords : 17 alpha-Ethinylestradiol * Microbial biodegradation * Ligninolytic fungi Subject RIV: EE - Microbiology, Virology Impact factor: 3.426, year: 2009

  14. In Situ Treatment of PCBs by Anaerobic Microbial Dechlorination in Aquatic Sediment: Are We There Yet?

    OpenAIRE

    Sowers, Kevin R.; May, Harold D.

    2012-01-01

    The remediation of PCBs in soils and sediments remains a particularly difficult problem to solve. The possibility of in situ degradation by microorganisms has been pursued for many years since this approach has the potential to provide a cost-effective and environmentally sustainable alternative to dredging for treatment of PCB impacted sites. Because PCBs are hydrophobic and partition into organic material they accumulate in anoxic environments well poised to support anaerobic dechlorination...

  15. MICROBIAL TRANSFORMATIONS OF TRU AND MIXED WASTES: ACTINIDE SPECIATION AND WASTE VOLUME REDUCTION

    Energy Technology Data Exchange (ETDEWEB)

    Francis, A.J.; Dodge, C.J.

    2006-06-01

    The overall goals of this research project are to determine the mechanism of microbial dissolution and stabilization of actinides in Department of Energy's (DOE) TRU wastes, contaminated sludges, soils, and sediments. This includes (1) investigations on the fundamental aspects of microbially catalyzed radionuclide and metal transformations (oxidation/reduction reactions, dissolution, precipitation, chelation); (2) understanding of the microbiological processes that control speciation and alter the chemical forms of complex inorganic/organic contaminant mixtures; and (3) development of new and improved microbially catalyzed processes resulting in immobilization of metals and radionuclides in the waste with concomitant waste volume reduction.

  16. MICROBIAL TRANSFORMATIONS OF TRU AND MIXED WASTES: ACTINIDE SPECIATION AND WASTE VOLUME REDUCTION

    Energy Technology Data Exchange (ETDEWEB)

    Francis, A.J.; Dodge, C.J.

    2006-06-01

    The overall goals of this research project are to determine the mechanism of microbial dissolution and stabilization of actinides in Department of Energy’s (DOE) TRU wastes, contaminated sludges, soils, and sediments. This includes (i) investigations on the fundamental aspects of microbially catalyzed radionuclide and metal transformations (oxidation/reduction reactions, dissolution, precipitation, chelation); (ii) understanding of the microbiological processes that control speciation and alter the chemical forms of complex inorganic/organic contaminant mixtures; and (iii) development of new and improved microbially catalyzed processes resulting in immobilization of metals and radionuclides in the waste with concomitant waste volume reduction.

  17. MICROBIAL TRANSFORMATIONS OF TRU AND MIXED WASTES: ACTINIDE SPECIATION AND WASTE VOLUME REDUCTION.

    Energy Technology Data Exchange (ETDEWEB)

    FRANCIS, A.J.; DODGE, C.J.

    2006-11-16

    The overall goals of this research project are to determine the mechanism of microbial dissolution and stabilization of actinides in Department of Energy's (DOE) TRU wastes, contaminated sludges, soils, and sediments. This includes (1) investigations on the fundamental aspects of microbially catalyzed radionuclide and metal transformations (oxidation/reduction reactions, dissolution, precipitation, chelation); (2) understanding of the microbiological processes that control speciation and alter the chemical forms of complex inorganic/organic contaminant mixtures; and (3) development of new and improved microbially catalyzed processes resulting in immobilization of metals and radionuclides in the waste with concomitant waste volume reduction.

  18. Inhibition of residual n-hexane in anaerobic digestion of lipid-extracted microalgal wastes and microbial community shift.

    Science.gov (United States)

    Yun, Yeo-Myeong; Shin, Hang-Sik; Lee, Chang-Kyu; Oh, You-Kwan; Kim, Hyun-Woo

    2016-04-01

    Converting lipid-extracted microalgal wastes to methane (CH4) via anaerobic digestion (AD) has the potential to make microalgae-based biodiesel platform more sustainable. However, it is apparent that remaining n-hexane (C6H14) from lipid extraction could inhibit metabolic pathway of methanogens. To test an inhibitory influence of residual n-hexane, this study conducted a series of batch AD by mixing lipid-extracted Chlorella vulgaris with a wide range of n-hexane concentration (∼10 g chemical oxygen demand (COD)/L). Experimental results show that the inhibition of n-hexane on CH4 yield was negligible up to 2 g COD/L and inhibition to methanogenesis became significant when it was higher than 4 g COD/L based on quantitative mass balance. Inhibition threshold was about 4 g COD/L of n-hexane. Analytical result of microbial community profile revealed that dominance of alkane-degrading sulfate-reducing bacteria (SRB) and syntrophic bacteria increased, while that of methanogens sharply dropped as n-hexane concentration increased. These findings offer a useful guideline of threshold n-hexane concentration and microbial community shift for the AD of lipid-extracted microalgal wastes. PMID:25966884

  19. Temperature and solids retention time control microbial population dynamics and volatile fatty acid production in replicated anaerobic digesters

    Science.gov (United States)

    Vanwonterghem, Inka; Jensen, Paul D.; Rabaey, Korneel; Tyson, Gene W.

    2015-01-01

    Anaerobic digestion is a widely used technology for waste stabilization and generation of biogas, and has recently emerged as a potentially important process for the production of high value volatile fatty acids (VFAs) and alcohols. Here, three reactors were seeded with inoculum from a stably performing methanogenic digester, and selective operating conditions (37°C and 55°C; 12 day and 4 day solids retention time) were applied to restrict methanogenesis while maintaining hydrolysis and fermentation. Replicated experiments performed at each set of operating conditions led to reproducible VFA production profiles which could be correlated with specific changes in microbial community composition. The mesophilic reactor at short solids retention time showed accumulation of propionate and acetate (42 ± 2% and 15 ± 6% of CODhydrolyzed, respectively), and dominance of Fibrobacter and Bacteroidales. Acetate accumulation (>50% of CODhydrolyzed) was also observed in the thermophilic reactors, which were dominated by Clostridium. Under all tested conditions, there was a shift from acetoclastic to hydrogenotrophic methanogenesis, and a reduction in methane production by >50% of CODhydrolyzed. Our results demonstrate that shortening the SRT and increasing the temperature are effective strategies for driving microbial communities towards controlled production of high levels of specific volatile fatty acids. PMID:25683239

  20. MICROBIAL TRANSFORMATIONS OF PLUTONIUM AND IMPLICATIONS FOR ITS MOBILITY.

    Energy Technology Data Exchange (ETDEWEB)

    FRANCIS, A.J.

    2000-09-30

    The current state of knowledge of the effect of plutonium on microorganisms and microbial activity is reviewed, and also the microbial processes affecting its mobilization and immobilization. The dissolution of plutonium is predominantly due to their production of extracellular metabolic products, organic acids, such as citric acid, and sequestering agents, such as siderophores. Plutonium may be immobilized by the indirect actions of microorganisms resulting in changes in Eh and its reduction from a higher to lower oxidation state, with the precipitation of Pu, its bioaccumulation by biomass, and bioprecipitation reactions. In addition, the abundance of microorganisms in Pu-contaminated soils, wastes, natural analog sites, and backfill materials that will be used for isolating the waste and role of microbes as biocolloids in the transport of Pu is discussed.

  1. Microbial transformations in phosphonate biosynthesis and catabolism, and their importance in nutrient cycling.

    Science.gov (United States)

    Chin, Jason P; McGrath, John W; Quinn, John P

    2016-04-01

    Phosphorus cycling in the biosphere has traditionally been thought to involve almost exclusively transformations of the element in its pentavalent oxidation state. Recent evidence, however, suggests that a significant fraction of environmental phosphorus may exist in a more reduced form. Most abundant of these reduced phosphorus compounds are the phosphonates, with their direct carbon-phosphorus bonds, and striking progress has recently been made in elucidating the biochemistry of microbial phosphonate transformations. These advances are now presented in the context of their contribution to our understanding of phosphorus biogeochemistry and of such diverse fields as the productivity of the oceans, marine methanogenesis and the discovery of novel microbial antimetabolites. PMID:26836350

  2. Differences in microbial communities and performance between suspended and attached growth anaerobic membrane bioreactors treating synthetic municipal wastewater

    KAUST Repository

    Harb, Moustapha

    2015-08-14

    Two lab-scale anaerobic membrane bioreactors (AnMBRs), one up-flow attached-growth (UA) and another continuously stirred (CSTR), were operated under mesophilic conditions (35 °C) while treating synthetic municipal wastewater (800 mg L−1 COD). Each reactor was attached to both polyvinylidene fluoride (PVDF) and polyethersulfone (PES) microfiltration (MF) membranes in an external cross-flow configuration. Both reactors were started up and run under the same operating conditions for multiple steady-state experiments. Chemical oxygen demand (COD) removal rates were similar for both reactors (90–96%), but captured methane was found to be 11–18% higher for the CSTR than the UA reactor. Ion Torrent sequencing targeting 16S rRNA genes showed that several operational taxonomic units (OTUs) most closely related to fermentative bacteria (e.g., Microbacter margulisiae) were dominant in the suspended biomass of the CSTR, accounting for 30% of the microbial community. Conversely, methanogenic archaea (e.g., Methanosaeta) and syntrophic bacteria (e.g., Smithella propionica) were found in significantly higher relative abundances in the UA AnMBR as compared to the CSTR due to their affinity for surface attachment. Of the methanogens that were present in the CSTR sludge, hydrogenotrophic methanogens dominated (e.g., Methanobacterium). Measured EPS (both proteins and carbohydrates), which has been broadly linked to fouling, was determined to be consistently lower in the UA AnMBR membrane samples than in CSTR AnMBR membrane samples. Principal component analysis (PCA) based on HPLC profiles of soluble microbial products (SMPs) further demonstrated these differences between reactor types in replicate runs. The results of this study showed that reactor configuration can significantly impact the development of the microbial communities of AnMBRs that are responsible for both membrane and reactor performance.

  3. Morphological observation and microbial population dynamics in anaerobic polyurethane foam biofilm degrading gelatin

    Directory of Open Access Journals (Sweden)

    Tommaso G.

    2002-01-01

    Full Text Available This work reports on a preliminary study of anaerobic degradation of gelatin with emphasis on the development of the proteolytic biofilm in polyurethane foam matrices in differential reactors. The evolution of the biofilm was observed during 22 days by optical and scanning electron microscopy (SEM analyses. Three distinct immobilization patterns could be observed in the polyurethane foam: cell aggregates entrapped in matrix pores, thin biofilms attached to inner polyurethane foam surfaces and individual cells that have adhered to the support. Rods, cocci and vibrios were observed as the predominant morphologies of bacterial cells. Methane was produced mainly by hydrogenothrophic reactions during the operation of the reactors.

  4. Microbial reefs in the Black Sea fueled by anaerobic oxidation of methane

    DEFF Research Database (Denmark)

    Michaelis, W.; Seifert, R.; Nauhaus, K.; Treude, T.; Thiel, V.; Blumenberg, M.; Knittel, K.; Gieseke, A.; Peterknecht, K.; Pape, T.; Boetius, A.; Amann, R.; Jørgensen, BB; Widdel, F.; Peckmann, J.; Pimenov, NV; Gulin, MB

    2002-01-01

    Massive microbial mats covering up to 4-meter-high carbonate buildups prosper at methane seeps in anoxic waters of the northwestern Black Sea shelf. Strong (13)C depletions indicate an incorporation of methane carbon into carbonates, bulk biomass, and specific lipids. The mats mainly consist of d...

  5. Biogas by two-stage microbial anaerobic and semi-continuous digestion of Chinese cabbage waste

    Institute of Scientific and Technical Information of China (English)

    Xiaoying Dong; Lijie Shao; Yan Wang; Wei Kou; Yanxin Cao; Dalei Zhang

    2015-01-01

    Anaerobic digestion of Chinese cabbage waste was investigated through a pilot-scale two-stage digester at a mesophilic temperature of 37 °C. In the acidification digester, the main product was acetic acid, with the maxi-mum concentration of 4289 mg·L-1 on the fourth day, accounting for 50.32%of total volatile fatty acids. The oxidation reduction potential (ORP) and NH4+-N level decreased gradual y with hydraulic retention time (HRT) of acidification. In the second digestion phase, the maximum methanogenic bacterial concentration reached 9.6 × 1010 ml-1 at the organic loading rate (OLR) of 3.5–4 kg VS·m-3, with corresponding HRT of 12–16 days. Accordingly, the optimal biogas production was 0.62 m3·(kg VS)-1, with methane content of 65%–68%. ORP and NH4+-N levels in the methanizer remained between-500 and-560 mV and 2000–4500 mg·L-1, respec-tively. Methanococcus and Methanosarcina served as the main methanogens in the anaerobic digester.

  6. Methane production enhancement by an independent cathode in integrated anaerobic reactor with microbial electrolysis

    DEFF Research Database (Denmark)

    Cai, Weiwei; Han, Tingting; Guo, Zechong;

    2016-01-01

    Anaerobic digestion (AD) represents a potential way to achieve energy recovery from waste organics. In this study, a novel bioelectrochemically-assisted anaerobic reactor is assembled by two AD systems separated by anion exchange membrane, with the cathode placing in the inside cylinder (cathodic...... AD) and the anode on the outside cylinder (anodic AD). In cathodic AD, average methane production rate goes up to 0.070 mL CH4/mL reactor/day, which is 2.59 times higher than AD control reactor (0.027 m3 CH4/m3/d). And COD removal is increased ~15% over AD control. When changing to sludge...... fermentation liquid, methane production rate has been further increased to 0.247 mL CH4/mL reactor/day (increased by 51.53% comparing with AD control). Energy recovery efficiency presents profitable gains, and economic revenue from increased methane totally self-cover the cost of input electricity. The study...

  7. Methane production enhancement by an independent cathode in integrated anaerobic reactor with microbial electrolysis.

    Science.gov (United States)

    Cai, Weiwei; Han, Tingting; Guo, Zechong; Varrone, Cristiano; Wang, Aijie; Liu, Wenzong

    2016-05-01

    Anaerobic digestion (AD) represents a potential way to achieve energy recovery from waste organics. In this study, a novel bioelectrochemically-assisted anaerobic reactor is assembled by two AD systems separated by anion exchange membrane, with the cathode placing in the inside cylinder (cathodic AD) and the anode on the outside cylinder (anodic AD). In cathodic AD, average methane production rate goes up to 0.070mLCH4/mL reactor/day, which is 2.59times higher than AD control reactor (0.027m(3)CH4/m(3)/d). And COD removal is increased ∼15% over AD control. When changing to sludge fermentation liquid, methane production rate has been further increased to 0.247mLCH4/mL reactor/day (increased by 51.53% comparing with AD control). Energy recovery efficiency presents profitable gains, and economic revenue from increased methane totally self-cover the cost of input electricity. The study indicates that cathodic AD could cost-effectively enhance methane production rate and degradation of glucose and fermentative liquid. PMID:26913643

  8. Iron oxides stimulate microbial monochlorobenzene in situ transformation in constructed wetlands and laboratory systems

    International Nuclear Information System (INIS)

    Natural wetlands are transition zones between anoxic ground and oxic surface water which may enhance the (bio)transformation potential for recalcitrant chloro-organic contaminants due to the unique geochemical conditions and gradients. Monochlorobenzene (MCB) is a frequently detected groundwater contaminant which is toxic and was thought to be persistent under anoxic conditions. Furthermore, to date, no degradation pathways for anoxic MCB removal have been proven in the field. Hence, it is important to investigate MCB biodegradation in the environment, as groundwater is an important drinking water source in many European countries. Therefore, two pilot-scale horizontal subsurface-flow constructed wetlands, planted and unplanted, were used to investigate the processes in situ contributing to the biotransformation of MCB in these gradient systems. The wetlands were fed with anoxic MCB-contaminated groundwater from a nearby aquifer in Bitterfeld, Germany. An overall MCB removal was observed in both wetlands, whereas just 10% of the original MCB inflow concentration was detected in the ponds. In particular in the gravel bed of the planted wetland, MCB removal was highest in summer season with 73 ± 9% compared to the unplanted one with 40 ± 5%. Whereas the MCB concentrations rapidly decreased in the transition zone of unplanted gravel to the pond, a significant MCB removal was already determined in the anoxic gravel bed of the planted system. The investigation of hydro-geochemical parameters revealed that iron and sulphate reduction were relevant redox processes in both wetlands. In parallel, the addition of ferric iron or nitrate stimulated the mineralisation of MCB in laboratory microcosms with anoxic groundwater from the same source, indicating that the potential for anaerobic microbial degradation of MCB is present at the field site. - Highlights: • MCB removal in anoxic gravel bed of a planted and an unplanted constructed wetland was accompanied by iron

  9. Iron oxides stimulate microbial monochlorobenzene in situ transformation in constructed wetlands and laboratory systems

    Energy Technology Data Exchange (ETDEWEB)

    Schmidt, Marie; Wolfram, Diana; Birkigt, Jan [Department of Isotope Biogeochemistry, Helmholtz Centre for Environmental Research — UFZ, Permoserstrasse 15, 04318 Leipzig (Germany); Ahlheim, Jörg [Department of Groundwater Remediation, Helmholtz Centre for Environmental Research — UFZ, Permoserstrasse 15, 04318 Leipzig (Germany); Paschke, Heidrun [Department of Analytical Chemistry, Helmholtz Centre for Environmental Research — UFZ, Permoserstrasse 15, 04318 Leipzig (Germany); Richnow, Hans-Hermann [Department of Isotope Biogeochemistry, Helmholtz Centre for Environmental Research — UFZ, Permoserstrasse 15, 04318 Leipzig (Germany); Nijenhuis, Ivonne, E-mail: ivonne.nijenhuis@ufz.de [Department of Isotope Biogeochemistry, Helmholtz Centre for Environmental Research — UFZ, Permoserstrasse 15, 04318 Leipzig (Germany)

    2014-02-01

    Natural wetlands are transition zones between anoxic ground and oxic surface water which may enhance the (bio)transformation potential for recalcitrant chloro-organic contaminants due to the unique geochemical conditions and gradients. Monochlorobenzene (MCB) is a frequently detected groundwater contaminant which is toxic and was thought to be persistent under anoxic conditions. Furthermore, to date, no degradation pathways for anoxic MCB removal have been proven in the field. Hence, it is important to investigate MCB biodegradation in the environment, as groundwater is an important drinking water source in many European countries. Therefore, two pilot-scale horizontal subsurface-flow constructed wetlands, planted and unplanted, were used to investigate the processes in situ contributing to the biotransformation of MCB in these gradient systems. The wetlands were fed with anoxic MCB-contaminated groundwater from a nearby aquifer in Bitterfeld, Germany. An overall MCB removal was observed in both wetlands, whereas just 10% of the original MCB inflow concentration was detected in the ponds. In particular in the gravel bed of the planted wetland, MCB removal was highest in summer season with 73 ± 9% compared to the unplanted one with 40 ± 5%. Whereas the MCB concentrations rapidly decreased in the transition zone of unplanted gravel to the pond, a significant MCB removal was already determined in the anoxic gravel bed of the planted system. The investigation of hydro-geochemical parameters revealed that iron and sulphate reduction were relevant redox processes in both wetlands. In parallel, the addition of ferric iron or nitrate stimulated the mineralisation of MCB in laboratory microcosms with anoxic groundwater from the same source, indicating that the potential for anaerobic microbial degradation of MCB is present at the field site. - Highlights: • MCB removal in anoxic gravel bed of a planted and an unplanted constructed wetland was accompanied by iron

  10. Electricity generation from cattle dung using microbial fuel cell technology during anaerobic acidogenesis and the development of microbial populations.

    Science.gov (United States)

    Zhao, Guang; Ma, Fang; Wei, Li; Chua, Hong; Chang, Chein-Chi; Zhang, Xiao-Jun

    2012-09-01

    A microbial fuel cell (MFC) was constructed to investigate the possible generation of electricity using cattle dung as a substrate. After 30 days of operation, stable electricity was generated, and the maximum volumetric power density was 0.220 W/m(3). The total chemical oxygen demand (TCOD) removal and coulombic efficiency (CE) of the MFC reached 73.9±1.8% and 2.79±0.6%, respectively, after 120 days of operation. Acetate was the main metabolite in the anolyte, and other volatile fatty acids (VFAs) (propionate and butyrate) were present in minor amounts. The PCR-DGGE analysis indicated that the following five groups of microbes were present: Proteobacteria, Bacteroides, Chloroflexi, Actinobacteria and Firmicutes. Proteobacteria and Firmicutes were the dominant phyla in the sample; specifically, 36.3% and 24.2% of the sequences obtained were Proteobacteria and Firmicutes, respectively. Clostridium sp., Pseudomonas luteola and Ochrobactrum pseudogrignonense were the most dominant groups during the electricity generation process. The diversity of archaea dramatically decreased after 20 days of operation. The detected archaea were hydrogenotrophic methanogens, and the Methanobacterium genus disappeared during the periods of stable electricity generation via acidogenesis. PMID:22595839

  11. Microbial community structures in an integrated two-phase anaerobic bioreactor fed by fruit vegetable wastes and wheat straw.

    Science.gov (United States)

    Wang, Chong; Zuo, Jiane; Chen, Xiaojie; Xing, Wei; Xing, Linan; Li, Peng; Lu, Xiangyang; Li, Chao

    2014-12-01

    The microbial community structures in an integrated two-phase anaerobic reactor (ITPAR) were investigated by 16S rDNA clone library technology. The 75L reactor was designed with a 25L rotating acidogenic unit at the top and a 50L conventional upflow methanogenic unit at the bottom, with a recirculation connected to the two units. The reactor had been operated for 21 stages to co-digest fruit/vegetable wastes and wheat straw, which showed a very good biogas production and decomposition of cellulosic materials. The results showed that many kinds of cellulose and glycan decomposition bacteria related with Bacteroidales, Clostridiales and Syntrophobacterales were dominated in the reactor, with more bacteria community diversities in the acidogenic unit. The methanogens were mostly related with Methanosaeta, Methanosarcina, Methanoculleus, Methanospirillum and Methanobacterium; the predominating genus Methanosaeta, accounting for 40.5%, 54.2%, 73.6% and 78.7% in four samples from top to bottom, indicated a major methanogenesis pathway by acetoclastic methanogenesis in the methanogenic unit. The beta diversity indexes illustrated a more similar distribution of bacterial communities than that of methanogens between acidogenic unit and methanogenic unit. The differentiation of methanogenic community composition in two phases, as well as pH values and volatile fatty acid (VFA) concentrations confirmed the phase separation of the ITPAR. Overall, the results of this study demonstrated that the special designing of ITPAR maintained a sufficient number of methanogens, more diverse communities and stronger syntrophic associations among microorganisms, which made two phase anaerobic digestion of cellulosic materials more efficient. PMID:25499496

  12. Microbial community structures in an integrated two-phase anaerobic bioreactor fed by fruit vegetable wastes and wheat straw

    Institute of Scientific and Technical Information of China (English)

    Chong Wang; Jiane Zuo; Xiaojie Chen; Wei Xing; Linan Xing; Peng Li; Xiangyang Lu

    2014-01-01

    The microbial community structures in an integrated two-phase anaerobic reactor (ITPAR) were investigated by 16S rDNA clone library technology.The 75 L reactor was designed with a 25 L rotating acidogenic unit at the top and a 50 L conventional upflow methanogenic unit at the bottom,with a recirculation connected to the two units.The reactor had been operated for 21 stages to co-digest fruit/vegetable wastes and wheat straw,which showed a very good biogas production and decomposition of cellulosic materials.The results showed that many kinds of cellulose and glycan decomposition bacteria related with Bacteroidales,Clostridiales and Syntrophobacterales were dominated in the reactor,with more bacteria community diversities in the acidogenic unit.The methanogens were mostly related with Methanosaeta,Methanosarcina,Methanoculleus,Methanospirillum and Methanobacterium; the predominating genus Methanosaeta,accounting for 40.5%,54.2%,73.6% and 78.7% in four samples from top to bottom,indicated a major methanogenesis pathway by acetoclastic methanogenesis in the methanogenic unit.The beta diversity indexes illustrated a more similar distribution of bacterial communities than that of methanogens between acidogenic unit and methanogenic unit.The differentiation of methanogenic community composition in two phases,as well as pH values and volatile fatty acid (VFA) concentrations confirmed the phase separation of the ITPAR.Overall,the results of this study demonstrated that the special designing of ITPAR maintained a sufficient number of methanogens,more diverse communities and stronger syntrophic assodations among microorganisms,which made two phase anaerobic digestion of cellulosic materials more efficient.

  13. Microbial transformation of highly persistent chlorinated pesticides and industrial chemicals.

    NARCIS (Netherlands)

    Middeldorp, P.J.M.

    1997-01-01

    Organic pollutants can be transformed, both in unsaturated and saturated areas of the soil, by means of biologically mediated reactions. The potential of soil microorganisms to clean up polluted soils is enormous. However, soil systems are highly heterogeneous with respect to the spatial distributio

  14. Long-chain fatty acids inhibition and adaptation process in anaerobic thermophilic digestion: Batch tests, microbial community structure and mathematical modelling

    DEFF Research Database (Denmark)

    Paltsi, Jordi; Illa, J.; Prenafeta-Boldu, F.X.;

    2010-01-01

    . Population profiles of eubacterial and archaeal 16S rDNA genes revealed that no significant shift on microbial community composition took place upon biomass exposure to LCFA. DNA sequencing of predominant DGGE bands showed close phylogenetic affinity to ribotypes characteristic from specific beta......Biomass samples taken during the continuous operation of thermophilic anaerobic digestors fed with manure and exposed to successive inhibitory pulses of long-chain fatty acids (LCFA) were characterized in terms of specific metabolic activities and 16S rDNA DGGE profiling of the microbial community...... structure. Improvement of hydrogenotrophic and acidogenic (beta-oxidation) activity rates was detected upon successive LCFA pulses, while different inhibition effects over specific anaerobic trophic groups were observed. Bioreactor recovery capacity and biomass adaptation to LCFA inhibition were verified...

  15. Microbial transformation from normal oral microbiota to acute endodontic infections

    Directory of Open Access Journals (Sweden)

    Hsiao William WL

    2012-07-01

    Full Text Available Abstract Background Endodontic infections are a leading cause of oro-facial pain and tooth loss in western countries, and may lead to severe life-threatening infections. These infections are polymicrobial with high bacterial diversity. Understanding the spatial transition of microbiota from normal oral cavities through the infected root canal to the acute periapical abscess can improve our knowledge of the pathogenesis of endodontic infections and lead to more effective treatment. We obtained samples from the oral cavity, infected root canal and periapical abscess of 8 patients (5 with localized and 3 with systemic infections. Microbial populations in these samples were analyzed using next-generation sequencing of 16S rRNA amplicons. Bioinformatics tools and statistical tests with rigorous criteria were used to elucidate the spatial transition of the microbiota from normal to diseased sites. Results On average, 10,000 partial 16S rRNA gene sequences were obtained from each sample. All sequences fell into 11 different bacterial phyla. The microbial diversity in root canal and abscess samples was significantly lower than in the oral samples. Streptococcus was the most abundant genus in oral cavities while Prevotella and Fusobacterium were most abundant in diseased samples. The microbiota community structures of root canal and abscess samples were, however, more similar to each other than to the oral cavity microbiota. Using rigorous criteria and novel bioinformatics tools, we found that Granulicatella adiacens, Eubacterium yurii, Prevotella melaninogenica, Prevotella salivae, Streptococcus mitis, and Atopobium rimae were over-represented in diseased samples. Conclusions We used a novel approach and high-throughput methodologies to characterize the microbiota associated normal and diseased oral sites in the same individuals.

  16. Temporal resilience and dynamics of anaerobic methane-oxidizing microbial communities to short-term changes in methane partial pressures

    Science.gov (United States)

    Klasek, S.; Tiantian, Y.; Torres, M. E.; Colwell, F. S.; Wang, F.; Liang, L.

    2015-12-01

    Marine sediments produce tens to hundreds of teragrams of methane annually, which is released from the seabed at thousands of cold seeps distributed globally along continental margins. Around 80-90% of this methane is consumed in shallower sediment layers before reaching the hydrosphere, in a microbially-mediated process known as anaerobic oxidation of methane (AOM) However, cold seeps appear to exhibit temporal variation in gas flux intensity, and AOM filter efficiency at cold seeps generally decreases with fluid flow rate. To our knowledge, the degree to which temporal heterogeneity in subsurface methane flux stimulates AOM community growth and adaptation to increased methane concentrations has not been investigated. Static high-pressure bioreactors were used to incubate sulfate-methane transition zone (SMTZ) and methanogenic zone sediments underlying a Mediterranean mud volcano gas flare under in situ temperature and pressure at 8 MPa methane. Sulfide production rates of 0.4 μmol/cm3/day in both sediment regimes after 4 months of incubation suggested the resilience of the marine subsurface methane filter may extend well below the SMTZ (40 cm). Similar incubations of SMTZ samples from below a gas flare off Svalbard at saturating (3.8 MPa) and 0.2 MPa methane are being sampled after 1 week, 4 weeks, and 4 months; sulfide production rates of 8-18 nmol/cm3/day were first observed after 4 weeks of incubation. Sediment samples at all specified time points for both sets of incubations were collected for nucleic acid extraction and cell fixation. Anaerobic methanotrophic archaea (ANME) and sulfate-reducing bacteria (SRB) are expected dominant taxa in enriched and non-enriched communities. 16S rDNA community analysis is expected to reveal additional microbial players involved in the short-term adaptation to higher methane partial pressures in the marine subsurface. Increased AOM community activity (RNA/DNA ratio) and copy numbers of methane cycling transcripts (mcr

  17. Response of a continuous anaerobic digester to temperature transitions: A critical range for restructuring the microbial community structure and function.

    Science.gov (United States)

    Kim, Jaai; Lee, Changsoo

    2016-02-01

    Temperature is a crucial factor that significantly influences the microbial activity and so the methanation performance of an anaerobic digestion (AD) process. Therefore, how to control the operating temperature for optimal activity of the microbes involved is a key to stable AD. This study examined the response of a continuous anaerobic reactor to a series of temperature shifts over a wide range of 35-65 °C using a dairy-processing byproduct as model wastewater. During the long-term experiment for approximately 16 months, the reactor was subjected to stepwise temperature increases by 5 °C at a fixed HRT of 15 days. The reactor showed stable performance within the temperature range of 35-45 °C, with the methane production rate and yield being maximum at 45 °C (18% and 26% greater, respectively, than at 35 °C). However, the subsequent increase to 50 °C induced a sudden performance deterioration with a complete cessation of methane recovery, indicating that the temperature range between 45 °C and 50 °C had a critical impact on the transition of the reactor's methanogenic activity from mesophilic to thermophilic. This serious process perturbation was associated with a severe restructuring of the reactor microbial community structure, particularly of methanogens, quantitatively as well as qualitatively. Once restored by interrupted feeding for about two months, the reactor maintained fairly stable performance under thermophilic conditions until it was upset again at 65 °C. Interestingly, in contrast to most previous reports, hydrogenotrophs largely dominated the methanogen community at mesophilic temperatures while acetotrophs emerged as a major group at thermophilic temperature. This implies that the primary methanogenesis route of the reactor shifted from hydrogen- to acetate-utilizing pathways with the temperature shifts from mesophilic to thermophilic temperatures. Our observations suggest that a mesophilic digester may not need to be cooled at up

  18. Reduction of bromate to bromide coupled to acetate oxidation by anaerobic mixed microbial cultures.

    Science.gov (United States)

    van Ginkel, C G; van Haperen, A M; van der Togt, B

    2005-01-01

    Bromate, a weakly mutagenic oxidizing agent, exists in surface waters. The biodegradation of bromate was investigated by assessing the ability of mixed cultures of micro-organisms for utilization of bromate as electron acceptor and acetate as electron donor. Reduction of bromate was only observed at relatively low concentrations (sludge from an activated sludge treatment plant and a digester reduced bromate without lag period at a constant rate. Using an enrichment culture adapted to bromate, it was demonstrated that bromate was a terminal electron acceptor for anaerobic growth. Approximately 50% of the acetate was utilized for growth with bromate by the enrichment culture. A doubling of 20 h was estimated from a logarithmic growth curve. Other electron acceptors, like perchlorate, chlorate and nitrate, were not reduced or at negligible rates by bromate-utilizing microorganisms. PMID:15607164

  19. Microbial diversity and anaerobic hydrocarbon degradation potential in an oil-contaminated mangrove sediment

    Directory of Open Access Journals (Sweden)

    Andrade Luiza L

    2012-08-01

    Full Text Available Abstract Background Mangrove forests are coastal wetlands that provide vital ecosystem services and serve as barriers against natural disasters like tsunamis, hurricanes and tropical storms. Mangroves harbour a large diversity of organisms, including microorganisms with important roles in nutrient cycling and availability. Due to tidal influence, mangroves are sites where crude oil from spills farther away can accumulate. The relationship between mangrove bacterial diversity and oil degradation in mangrove sediments remains poorly understood. Results Mangrove sediment was sampled from 0–5, 15–20 and 35–40 cm depth intervals from the Suruí River mangrove (Rio de Janeiro, Brazil, which has a history of oil contamination. DGGE fingerprinting for bamA, dsr and 16S rRNA encoding fragment genes, and qPCR analysis using dsr and 16S rRNA gene fragment revealed differences with sediment depth. Conclusions Analysis of bacterial 16S rRNA gene diversity revealed changes with depth. DGGE for bamA and dsr genes shows that the anaerobic hydrocarbon-degrading community profile also changed between 5 and 15 cm depth, and is similar in the two deeper sediments, indicating that below 15 cm the anaerobic hydrocarbon-degrading community appears to be well established and homogeneous in this mangrove sediment. qPCR analysis revealed differences with sediment depth, with general bacterial abundance in the top layer (0–5 cm being greater than in both deeper sediment layers (15–20 and 35–40 cm, which were similar to each other.

  20. Long- and short-term temperature responses of microbially-mediated boreal soil organic matter transformations

    Science.gov (United States)

    Min, K.; Buckeridge, K. M.; Edwards, K. A.; Ziegler, S. E.; Billings, S. A.

    2015-12-01

    Microorganisms use exoenzymes to decay soil organic matter into assimilable substrates, some of which are transformed into CO2. Microbial CO2 efflux contributes up to 60% of soil respiration, a feature that can change with temperature due to altered exoenzyme activities (short-term) and microbial communities producing different exoenzymes (longer-term). Often, however, microbial temperature responses are masked by factors that also change with temperature in soil, making accurate projections of microbial CO2 efflux with warming challenging. Using soils along a natural climate gradient similar in most respects except for temperature regime (Newfoundland Labrador Boreal Ecosystem Latitudinal Transect), we investigated short-vs. long-term temperature responses of microbially-mediated organic matter transformations. While incubating soils at 5, 15, and 25°C for 84 days, we measured exoenzyme activities, CO2 efflux rates and biomass, and extracted DNA at multiple times. We hypothesized that short-term, temperature-induced increases in exoenzyme activities and CO2 losses would be smaller in soils from warmer regions, because microbes presumably adapted to warmer regions should use assimilable substrates more efficiently and thus produce exoenzymes at a lower rate. While incubation temperature generally induced greater exoenzyme activities (pDNA sequencing will reveal how microbial community abundance and composition change with short-vs. longer-term temperature change. Though short-term microbial responses to temperature suggest higher CO2 efflux and thus lower efficiency of resource use with warming, longer-term adaptations of microbial communities to warmer climates remain unknown; this work helps fill that knowledge gap.

  1. Performance of a microbial fuel cell-based biosensor for online monitoring in an integrated system combining microbial fuel cell and upflow anaerobic sludge bed reactor.

    Science.gov (United States)

    Jia, Hui; Yang, Guang; Wang, Jie; Ngo, Huu Hao; Guo, Wenshan; Zhang, Hongwei; Zhang, Xinbo

    2016-10-01

    A hybrid system integrating a microbial fuel cell (MFC)-based biosensor with upflow anaerobic sludge blanket (UASB) was investigated for real-time online monitoring of the internal operation of the UASB reactor. The features concerned were its rapidity and steadiness with a constant operation condition. In addition, the signal feedback mechanism was examined by the relationship between voltage and time point of changed COD concentration. The sensitivity of different concentrations was explored by comparing the signal feedback time point between the voltage and pH. Results showed that the electrical signal feedback was more sensitive than pH and the thresholds of sensitivity were S=3×10(-5)V/(mg/L) and S=8×10(-5)V/(mg/L) in different concentration ranges, respectively. Although only 0.94% of the influent COD was translated into electricity and applied for biosensing, this integrated system indicated great potential without additional COD consumption for real-time monitoring. PMID:27372008

  2. Microbial transformation of highly persistent chlorinated pesticides and industrial chemicals.

    OpenAIRE

    Middeldorp, P.J.M.

    1997-01-01

    Organic pollutants can be transformed, both in unsaturated and saturated areas of the soil, by means of biologically mediated reactions. The potential of soil microorganisms to clean up polluted soils is enormous. However, soil systems are highly heterogeneous with respect to the spatial distribution of substrates, nutrients and microorganisms, and also with respect to various phases and interfaces (e.g. water, air, minerals, organic matter). To come to the development of appropriate soil bio...

  3. The effect of salinity, redox mediators and temperature on anaerobic biodegradation of petroleum hydrocarbons in microbial fuel cells

    Energy Technology Data Exchange (ETDEWEB)

    Adelaja, Oluwaseun, E-mail: o.adelaja@my.westminster.ac.uk; Keshavarz, Tajalli, E-mail: t.keshavarz@westminster.ac.uk; Kyazze, Godfrey, E-mail: g.kyazze@westminster.ac.uk

    2015-02-11

    Highlights: • Effective degradation of petroleum hydrocarbon mixtures was achieved using MFC. • Adapted anaerobic microbial consortium was used as inoculum. • Bio-electricity generation was enhanced by 30-fold when riboflavin, was added. • Optimum MFC performance was obtained at mesophilic and moderately saline conditions. • Stable MFC performance was obtained during prolonged fed-batch MFC operation. - Abstract: Microbial fuel cells (MFCs) need to be robust if they are to be applied in the field for bioremediation. This study investigated the effect of temperature (20–50 °C), salinity (0.5–2.5% (w/v) as sodium chloride), the use of redox mediators (riboflavin and anthraquinone-2-sulphonate, AQS) and prolonged fed-batch operation (60 days) on biodegradation of a petroleum hydrocarbon mix (i.e. phenanthrene and benzene) in MFCs. The performance criteria were degradation efficiency, % COD removal and electrochemical performance. Good electrochemical and degradation performance were maintained up to a salinity of 1.5% (w/v) but deteriorated by 35-fold and 4-fold respectively as salinity was raised to 2.5%w/v. Degradation rates and maximum power density were both improved by approximately 2-fold at 40 °C compared to MFC performance at 30 °C but decreased sharply by 4-fold when operating temperature was raised to 50 °C. The optimum reactor performance obtained at 40 °C was 1.15 mW/m{sup 2} maximum power density, 89.1% COD removal and a degradation efficiency of 97.10%; at moderately saline (1% w/v) conditions the maximum power density was 1.06 mW/m{sup 2}, 79.1% COD removal and 91.6% degradation efficiency. This work suggests the possible application of MFC technology in the effective treatment of petroleum hydrocarbons contaminated site and refinery effluents.

  4. The effect of salinity, redox mediators and temperature on anaerobic biodegradation of petroleum hydrocarbons in microbial fuel cells

    International Nuclear Information System (INIS)

    Highlights: • Effective degradation of petroleum hydrocarbon mixtures was achieved using MFC. • Adapted anaerobic microbial consortium was used as inoculum. • Bio-electricity generation was enhanced by 30-fold when riboflavin, was added. • Optimum MFC performance was obtained at mesophilic and moderately saline conditions. • Stable MFC performance was obtained during prolonged fed-batch MFC operation. - Abstract: Microbial fuel cells (MFCs) need to be robust if they are to be applied in the field for bioremediation. This study investigated the effect of temperature (20–50 °C), salinity (0.5–2.5% (w/v) as sodium chloride), the use of redox mediators (riboflavin and anthraquinone-2-sulphonate, AQS) and prolonged fed-batch operation (60 days) on biodegradation of a petroleum hydrocarbon mix (i.e. phenanthrene and benzene) in MFCs. The performance criteria were degradation efficiency, % COD removal and electrochemical performance. Good electrochemical and degradation performance were maintained up to a salinity of 1.5% (w/v) but deteriorated by 35-fold and 4-fold respectively as salinity was raised to 2.5%w/v. Degradation rates and maximum power density were both improved by approximately 2-fold at 40 °C compared to MFC performance at 30 °C but decreased sharply by 4-fold when operating temperature was raised to 50 °C. The optimum reactor performance obtained at 40 °C was 1.15 mW/m2 maximum power density, 89.1% COD removal and a degradation efficiency of 97.10%; at moderately saline (1% w/v) conditions the maximum power density was 1.06 mW/m2, 79.1% COD removal and 91.6% degradation efficiency. This work suggests the possible application of MFC technology in the effective treatment of petroleum hydrocarbons contaminated site and refinery effluents

  5. Metabolic and microbial community dynamics during the anaerobic digestion of maize silage in a two-phase process.

    Science.gov (United States)

    Sträuber, Heike; Lucas, Rico; Kleinsteuber, Sabine

    2016-01-01

    Two-phasic anaerobic digestion processes (hydrolysis/acidogenesis separated from acetogenesis/methanogenesis) can be used for biogas production on demand or a combined chemicals/bioenergy production. For an effective process control, detailed knowledge about the microbial catalysts and their correlation to process conditions is crucial. In this study, maize silage was digested in a two-phase process and interrelationships between process parameters and microbial communities were revealed. In the first-phase reactor, alternating metabolic periods were observed which emerged independently from the feeding frequency. During the L-period, up to 11.8 g L(-1) lactic acid was produced which significantly correlated to lactic acid bacteria of the genus Lactobacillus as the most abundant community members. During the alternating G-period, the production of volatile fatty acids (up to 5.3, 4.0 and 3.1 g L(-1) for propionic, n-butyric and n-caproic acid, respectively) dominated accompanied by a high gas production containing up to 28 % hydrogen. The relative abundance of various Clostridiales increased during this metabolic period. In the second-phase reactor, the metabolic fluctuations of the first phase were smoothed out resulting in a stable biogas production as well as stable bacterial and methanogenic communities. However, the biogas composition followed the metabolic dynamics of the first phase: the hydrogen content increased during the L-period whereas highest CH4/CO2 ratios (up to 2.8) were reached during the G-period. Aceticlastic Methanosaeta as well as hydrogenotrophic Methanoculleus and Methanobacteriaceae were identified as dominant methanogens. Consequently, a directed control of the first-phase stabilizing desired metabolic states can lead to an enhanced productivity regarding chemicals and bioenergy. PMID:26411455

  6. Microbial electrolysis contribution to anaerobic digestion of waste activated sludge, leading to accelerated methane production

    DEFF Research Database (Denmark)

    Liu, Wenzong; Cai, Weiwei; Guo, Zechong;

    2016-01-01

    Methane production rate (MPR) in waste activated sludge (WAS) digestion processes is typically limitedby the initial steps of complex organic matter degradation, leading to a limited MPR due to sludgefermentation speed of solid particles. In this study, a novel microbial electrolysis AD reactor (ME....../m3 reactor/d in AD). The methane production yield reached 116.2 mg/g VSS in the ME-ADreactor. According to balance calculation on electron transfer and methane yield, the increasedmethane production was mostly dependent on electron contribution through the ME system. Thus, theuse of the novel ME...

  7. Transforming microbial genotyping: a robotic pipeline for genotyping bacterial strains.

    Directory of Open Access Journals (Sweden)

    Brian O'Farrell

    Full Text Available Microbial genotyping increasingly deals with large numbers of samples, and data are commonly evaluated by unstructured approaches, such as spread-sheets. The efficiency, reliability and throughput of genotyping would benefit from the automation of manual manipulations within the context of sophisticated data storage. We developed a medium- throughput genotyping pipeline for MultiLocus Sequence Typing (MLST of bacterial pathogens. This pipeline was implemented through a combination of four automated liquid handling systems, a Laboratory Information Management System (LIMS consisting of a variety of dedicated commercial operating systems and programs, including a Sample Management System, plus numerous Python scripts. All tubes and microwell racks were bar-coded and their locations and status were recorded in the LIMS. We also created a hierarchical set of items that could be used to represent bacterial species, their products and experiments. The LIMS allowed reliable, semi-automated, traceable bacterial genotyping from initial single colony isolation and sub-cultivation through DNA extraction and normalization to PCRs, sequencing and MLST sequence trace evaluation. We also describe robotic sequencing to facilitate cherrypicking of sequence dropouts. This pipeline is user-friendly, with a throughput of 96 strains within 10 working days at a total cost of 200,000 items were processed by two to three people. Our sophisticated automated pipeline can be implemented by a small microbiology group without extensive external support, and provides a general framework for semi-automated bacterial genotyping of large numbers of samples at low cost.

  8. Effects of microbially induced transformations and shift in bacterial community on arsenic mobility in arsenic-rich deep aquifer sediments.

    Science.gov (United States)

    Das, Suvendu; Liu, Chia-Chuan; Jean, Jiin-Shuh; Lee, Chuan-Chun; Yang, Huai-Jen

    2016-06-01

    Elevated concentration of arsenic (As) prevailed in deep aquifers of Chianan Plain, Taiwan. Arsenic release in relation to microbially induced transformations and shift in bacterial communities in deep aquifer sediments of Budai, southwestern Taiwan were investigated using microcosm experiments and substrate amendments over 90 days of anaerobic incubation. The results revealed that As reduction was independent of Fe reduction and a modest rate of sedimentary As release into aqueous phase occurred at the expense of the native organic carbon. Addition of lactate resulted in a parallel increase in As(III) (3.7-fold), Fe(II) (6.2-fold) and Mn (3.5 fold) in aqueous phase compared to un-amended slurries and the enrichment of sequences related to mostly Bacillus, Flavisolibacter, and Geobacter spp, suggesting the important role of these bacteria in As enrichment through reductive dissolution of As-bearing Fe and Mn minerals. The increase in phosphate-extractable As in solid phase with concomitant rise in As in aqueous phase over the course of incubation further attested to the importance of reductive dissolution in promoting As release. Furthermore, the increase in arrA gene abundance with addition of labile carbon suggests that dissimilatory As reduction also may contribute to As enrichment in the water of the deep aquifer of Budai. PMID:26897570

  9. Biomethane recovery from Egeria densa in a microbial electrolysis cell-assisted anaerobic system: Performance and stability assessment.

    Science.gov (United States)

    Zhen, Guangyin; Kobayashi, Takuro; Lu, Xueqin; Kumar, Gopalakrishnan; Xu, Kaiqin

    2016-04-01

    Renewable energy recovery from submerged aquatic plants such as Egeria densa (E. densa) via continuous anaerobic digestion (AD) represents a bottleneck because of process instability. Here, a single-chamber membrane-free microbial electrolysis cell (MEC) equipped with a pair of Ti/RuO2 mesh electrodes (i.e. the combined MEC-AD system) was implemented at different applied voltages (0-1.0 V) to evaluate the potential effects of bioelectrochemical stimulation on methane production and process stability of E. densa fermentation. The application of MEC effectively stabilized E. densa fermentation and upgraded overall process performance, especially solid matters removal. E. densa AD process was operated steadily throughout bioelectrochemical process without any signs of imbalance. The solubilization-removal of solid matters and methane conversion efficiency gradually increased with increasing applied voltage, with an average methane yield of approximately 248.2 ± 21.0 mL L(-1) d(-1) at 1.0 V. Whereas, the stability of the process became worse immediately once the external power was removed, with weaken solid matters removal along with methane output, evidencing the favorable and indispensable role in maintaining process stability. The stabilizing effect was further quantitatively demonstrated by statistical analysis using standard deviation (SD), coefficient of variance (CV) and box-plots. The syntrophic and win-win interactions between fermenting bacteria and electroactive bacteria might have contributed to the improved process stability and bioenergy recovery. PMID:26855215

  10. Biogas production and microbial community shift through neutral pH control during the anaerobic digestion of pig manure.

    Science.gov (United States)

    Zhou, Jun; Zhang, Rui; Liu, Fenwu; Yong, Xiaoyu; Wu, Xiayuan; Zheng, Tao; Jiang, Min; Jia, Honghua

    2016-10-01

    Laboratory-scale reactors, in which the pH could be auto-adjusted, were employed to investigate the mesophilic methane fermentation with pig manure (7.8% total solids) at pH 6.0, 7.0, and 8.0. Results showed that the performance of anaerobic digestion was strongly dependent on pH value. Biogas production and methane content at neutral pH 7.0 were significantly higher (16,607mL, 51.81%) than those at pH 6.0 (6916mL, 42.9%) and 8.0 (9739mL, 35.6%). Denaturing gradient gel electrophoresis fingerprinting and Shannon's index indicated that the samples contained highly diverse microbial communities. The major genus at pH 7.0 was Methanocorpusculum, compared with that was Methanosarcina at both pH 6.0 and 8.0. Our research revealed that cultures maintained at pH 7.0 could support increased biogas production, which has significant implications for the scale-up biogas engineering. PMID:26944458

  11. Microbiological studies of an anaerobic baffled reactor: microbial community characterisation and deactivation of health-related indicator bacteria.

    Science.gov (United States)

    Lalbahadur, T; Pillay, S; Rodda, N; Smith, M; Buckley, C; Holder, F; Bux, F; Foxon, K

    2005-01-01

    This WRC funded project has studied the appropriateness of the ABR (anaerobic baffled reactor) for on-site primary sanitation in low-income communities. A 3,000 L pilot reactor was located at the Kingsburgh wastewater treatment plant south of Durban, South Africa. Feed to the reactor was raw domestic wastewater containing a significant proportion of particulate organic matter. The compartments of the ABR were routinely monitored for pH, COD, and gas production, among other physical-chemical determinants. The microbial population in each compartment was analysed by fluorescent in situ hybridisation, using general oligonucleotide probes for eubacteria and archeae and a suite of 10 genera or family specific probes. Scanning electron microscopy was conducted on the sludge fraction of each compartment. Mixed fractions from each compartment were also analysed for health-related indicator bacteria (total coliforms and E. coli). Results indicated that methanogenesis was not occurring to the expected extent in the latter compartments, and that this was probably due to a hydraulic load limitation. This contrasted with earlier studies on industrial effluent, for which the organic load was exclusively in soluble form. Inactivation of health-related indicator bacteria was less than 1 log, indicating the need for an additional post-treatment of the effluent to protect community health. PMID:16104417

  12. Temperature response of denitrification and anaerobic ammonium oxidation rates and microbial community structure in Arctic fjord sediments.

    Science.gov (United States)

    Canion, Andy; Overholt, Will A; Kostka, Joel E; Huettel, Markus; Lavik, Gaute; Kuypers, Marcel M M

    2014-10-01

    The temperature dependency of denitrification and anaerobic ammonium oxidation (anammox) rates from Arctic fjord sediments was investigated in a temperature gradient block incubator for temperatures ranging from -1 to 40°C. Community structure in intact sediments and slurry incubations was determined using Illumina SSU rRNA gene sequencing. The optimal temperature (Topt ) for denitrification was 25-27°C, whereas anammox rates were optimal at 12-17°C. Both denitrification and anammox exhibited temperature responses consistent with a psychrophilic community, but anammox bacteria may be more specialized for psychrophilic activity. Long-term (1-2 months) warming experiments indicated that temperature increases of 5-10°C above in situ had little effect on the microbial community structure or the temperature response of denitrification and anammox. Increases of 25°C shifted denitrification temperature responses to mesophilic with concurrent community shifts, and anammox activity was eliminated above 25°C. Additions of low molecular weight organic substrates (acetate and lactate) caused increases in denitrification rates, corroborating the hypothesis that the supply of organic substrates is a more dominant control of respiration rates than low temperature. These results suggest that climate-related changes in sinking particulate flux will likely alter rates of N removal more rapidly than warming. PMID:25115991

  13. Differences in volatile methyl siloxane (VMS) profiles in biogas from landfills and anaerobic digesters and energetics of VMS transformations

    Energy Technology Data Exchange (ETDEWEB)

    Tansel, Berrin, E-mail: tanselb@fiu.edu; Surita, Sharon C.

    2014-11-15

    Highlights: • In the digester gas, D4 and D5 comprised the 62% and 27% if siloxanes, respectively. • In landfill gas, the bulk of siloxanes were TMSOH (58%) followed by D4 (17%). • Methane utilization may be a possible mechanism for TMSOH formation in the landfills. • The geometric configurations of D4 and D5 molecules make them very stable. - Abstract: The objectives of this study were to compare the types and levels of volatile methyl siloxanes (VMS) present in biogas generated in the anaerobic digesters and landfills, evaluate the energetics of siloxane transformations under anaerobic conditions, compare the conditions in anaerobic digesters and municipal solid waste (MSW) landfills which result in differences in siloxane compositions. Biogas samples were collected at the South District Wastewater Treatment Plant and South Dade Landfill in Miami, Florida. In the digester gas, D4 and D5 comprised the bulk of total siloxanes (62% and 27%, respectively) whereas in the landfill gas, the bulk of siloxanes were trimethylsilanol (TMSOH) (58%) followed by D4 (17%). Presence of high levels of TMSOH in the landfill gas indicates that methane utilization may be a possible reaction mechanism for TMSOH formation. The free energy change for transformation of D5 and D4 to TMSOH either by hydrogen or methane utilization are thermodynamically favorable. Either hydrogen or methane should be present at relatively high concentrations for TMSOH formation which explains the high levels present in the landfill gas. The high bond energy and bond distance of the Si–O bond, in view of the atomic sizes of Si and O atoms, indicate that Si atoms can provide a barrier, making it difficult to break the Si–O bonds especially for molecules with specific geometric configurations such as D4 and D5 where oxygen atoms are positioned inside the frame formed by the large Si atoms which are surrounded by the methyl groups.

  14. Differences in volatile methyl siloxane (VMS) profiles in biogas from landfills and anaerobic digesters and energetics of VMS transformations

    International Nuclear Information System (INIS)

    Highlights: • In the digester gas, D4 and D5 comprised the 62% and 27% if siloxanes, respectively. • In landfill gas, the bulk of siloxanes were TMSOH (58%) followed by D4 (17%). • Methane utilization may be a possible mechanism for TMSOH formation in the landfills. • The geometric configurations of D4 and D5 molecules make them very stable. - Abstract: The objectives of this study were to compare the types and levels of volatile methyl siloxanes (VMS) present in biogas generated in the anaerobic digesters and landfills, evaluate the energetics of siloxane transformations under anaerobic conditions, compare the conditions in anaerobic digesters and municipal solid waste (MSW) landfills which result in differences in siloxane compositions. Biogas samples were collected at the South District Wastewater Treatment Plant and South Dade Landfill in Miami, Florida. In the digester gas, D4 and D5 comprised the bulk of total siloxanes (62% and 27%, respectively) whereas in the landfill gas, the bulk of siloxanes were trimethylsilanol (TMSOH) (58%) followed by D4 (17%). Presence of high levels of TMSOH in the landfill gas indicates that methane utilization may be a possible reaction mechanism for TMSOH formation. The free energy change for transformation of D5 and D4 to TMSOH either by hydrogen or methane utilization are thermodynamically favorable. Either hydrogen or methane should be present at relatively high concentrations for TMSOH formation which explains the high levels present in the landfill gas. The high bond energy and bond distance of the Si–O bond, in view of the atomic sizes of Si and O atoms, indicate that Si atoms can provide a barrier, making it difficult to break the Si–O bonds especially for molecules with specific geometric configurations such as D4 and D5 where oxygen atoms are positioned inside the frame formed by the large Si atoms which are surrounded by the methyl groups

  15. Differences in volatile methyl siloxane (VMS) profiles in biogas from landfills and anaerobic digesters and energetics of VMS transformations.

    Science.gov (United States)

    Tansel, Berrin; Surita, Sharon C

    2014-11-01

    The objectives of this study were to compare the types and levels of volatile methyl siloxanes (VMS) present in biogas generated in the anaerobic digesters and landfills, evaluate the energetics of siloxane transformations under anaerobic conditions, compare the conditions in anaerobic digesters and municipal solid waste (MSW) landfills which result in differences in siloxane compositions. Biogas samples were collected at the South District Wastewater Treatment Plant and South Dade Landfill in Miami, Florida. In the digester gas, D4 and D5 comprised the bulk of total siloxanes (62% and 27%, respectively) whereas in the landfill gas, the bulk of siloxanes were trimethylsilanol (TMSOH) (58%) followed by D4 (17%). Presence of high levels of TMSOH in the landfill gas indicates that methane utilization may be a possible reaction mechanism for TMSOH formation. The free energy change for transformation of D5 and D4 to TMSOH either by hydrogen or methane utilization are thermodynamically favorable. Either hydrogen or methane should be present at relatively high concentrations for TMSOH formation which explains the high levels present in the landfill gas. The high bond energy and bond distance of the Si-O bond, in view of the atomic sizes of Si and O atoms, indicate that Si atoms can provide a barrier, making it difficult to break the Si-O bonds especially for molecules with specific geometric configurations such as D4 and D5 where oxygen atoms are positioned inside the frame formed by the large Si atoms which are surrounded by the methyl groups. PMID:25160660

  16. Anaerobic microbial fuel cell treating combined industrial wastewater: Correlation of electricity generation with pollutants.

    Science.gov (United States)

    Abbasi, Umara; Jin, Wang; Pervez, Arshid; Bhatti, Zulfiqar Ahmad; Tariq, Madiha; Shaheen, Shahida; Iqbal, Akhtar; Mahmood, Qaisar

    2016-01-01

    Microbial fuel cell (MFC) is a new technology that not only generates energy but treats wastewater as well. A dual chamber MFC was operated under laboratory conditions. Wastewater samples from vegetable oil industries, metal works, glass and marble industries, chemical industries and combined industrial effluents were collected and each was treated for 98h in MFC. The treatment efficiency for COD in MFC was in range of 85-90% at hydraulic retention time (HRT) of 96h and had significant impact on wastewater treatment as well. The maximum voltage of 890mV was generated when vegetable oil industries discharge was treated with columbic efficiency of 5184.7C. The minimum voltage was produced by Glass House wastewater which was 520mV. There was positive significant co-relation between COD concentration and generated voltage. Further research should be focused on the organic contents of wastewater and various ionic species affecting voltage generation in MFC. PMID:26476157

  17. Effect of cathode electron acceptors on simultaneous anaerobic sulfide and nitrate removal in microbial fuel cell.

    Science.gov (United States)

    Cai, Jing; Zheng, Ping; Mahmood, Qaisar

    2016-01-01

    The current investigation reports the effect of cathode electron acceptors on simultaneous sulfide and nitrate removal in two-chamber microbial fuel cells (MFCs). Potassium permanganate and potassium ferricyanide were common cathode electron acceptors and evaluated for substrate removal and electricity generation. The abiotic MFCs produced electricity through spontaneous electrochemical oxidation of sulfide. In comparison with abiotic MFC, the biotic MFC showed better ability for simultaneous nitrate and sulfide removal along with electricity generation. Keeping external resistance of 1,000 Ω, both MFCs showed good capacities for substrate removal where nitrogen and sulfate were the main end products. The steady voltage with potassium permanganate electrodes was nearly twice that of with potassium ferricyanide. Cyclic voltammetry curves confirmed that the potassium permanganate had higher catalytic activity than potassium ferricyanide. The potassium permanganate may be a suitable choice as cathode electron acceptor for enhanced electricity generation during simultaneous treatment of sulfide and nitrate in MFCs. PMID:26901739

  18. Comparing mesophilic and thermophilic anaerobic digestion of chicken manure: Microbial community dynamics and process resilience

    Energy Technology Data Exchange (ETDEWEB)

    Niu, Qigui; Takemura, Yasuyuki; Kubota, Kengo [Department of Civil and Environmental Engineering, Graduate School of Engineering Tohoku University, 6-6-06 Aza-Aoba, Aramaki, Aoba-ku, Sendai, Miyagi 980-8579 (Japan); Li, Yu-You, E-mail: yyli@epl1.civil.tohoku.ac.jp [Department of Civil and Environmental Engineering, Graduate School of Engineering Tohoku University, 6-6-06 Aza-Aoba, Aramaki, Aoba-ku, Sendai, Miyagi 980-8579 (Japan); Key Lab of Northwest Water Resource, Environment and Ecology, MOE, Xi’an University of Architecture and Technology, Xi’an (China)

    2015-09-15

    Highlights: • Microbial community dynamics and process functional resilience were investigated. • The threshold of TAN in mesophilic reactor was higher than the thermophilic reactor. • The recoverable archaeal community dynamic sustained the process resilience. • Methanosarcina was more sensitive than Methanoculleus on ammonia inhibition. • TAN and FA effects the dynamic of hydrolytic and acidogenic bacteria obviously. - Abstract: While methane fermentation is considered as the most successful bioenergy treatment for chicken manure, the relationship between operational performance and the dynamic transition of archaeal and bacterial communities remains poorly understood. Two continuous stirred-tank reactors were investigated under thermophilic and mesophilic conditions feeding with 10%TS. The tolerance of thermophilic reactor on total ammonia nitrogen (TAN) was found to be 8000 mg/L with free ammonia (FA) 2000 mg/L compared to 16,000 mg/L (FA1500 mg/L) of mesophilic reactor. Biomethane production was 0.29 L/gV S{sub in} in the steady stage and decreased following TAN increase. After serious inhibition, the mesophilic reactor was recovered successfully by dilution and washing stratagem compared to the unrecoverable of thermophilic reactor. The relationship between the microbial community structure, the bioreactor performance and inhibitors such as TAN, FA, and volatile fatty acid was evaluated by canonical correspondence analysis. The performance of methanogenic activity and substrate removal efficiency were changed significantly correlating with the community evenness and phylogenetic structure. The resilient archaeal community was found even after serious inhibition in both reactors. Obvious dynamics of bacterial communities were observed in acidogenic and hydrolytic functional bacteria following TAN variation in the different stages.

  19. Comparing mesophilic and thermophilic anaerobic digestion of chicken manure: Microbial community dynamics and process resilience

    International Nuclear Information System (INIS)

    Highlights: • Microbial community dynamics and process functional resilience were investigated. • The threshold of TAN in mesophilic reactor was higher than the thermophilic reactor. • The recoverable archaeal community dynamic sustained the process resilience. • Methanosarcina was more sensitive than Methanoculleus on ammonia inhibition. • TAN and FA effects the dynamic of hydrolytic and acidogenic bacteria obviously. - Abstract: While methane fermentation is considered as the most successful bioenergy treatment for chicken manure, the relationship between operational performance and the dynamic transition of archaeal and bacterial communities remains poorly understood. Two continuous stirred-tank reactors were investigated under thermophilic and mesophilic conditions feeding with 10%TS. The tolerance of thermophilic reactor on total ammonia nitrogen (TAN) was found to be 8000 mg/L with free ammonia (FA) 2000 mg/L compared to 16,000 mg/L (FA1500 mg/L) of mesophilic reactor. Biomethane production was 0.29 L/gV Sin in the steady stage and decreased following TAN increase. After serious inhibition, the mesophilic reactor was recovered successfully by dilution and washing stratagem compared to the unrecoverable of thermophilic reactor. The relationship between the microbial community structure, the bioreactor performance and inhibitors such as TAN, FA, and volatile fatty acid was evaluated by canonical correspondence analysis. The performance of methanogenic activity and substrate removal efficiency were changed significantly correlating with the community evenness and phylogenetic structure. The resilient archaeal community was found even after serious inhibition in both reactors. Obvious dynamics of bacterial communities were observed in acidogenic and hydrolytic functional bacteria following TAN variation in the different stages

  20. Functional Analysis and Discovery of Microbial Genes Transforming Metallic and Organic Pollutants: Database and Experimental Tools

    Energy Technology Data Exchange (ETDEWEB)

    Lawrence P. Wackett; Lynda B.M. Ellis

    2004-12-09

    Microbial functional genomics is faced with a burgeoning list of genes which are denoted as unknown or hypothetical for lack of any knowledge about their function. The majority of microbial genes encode enzymes. Enzymes are the catalysts of metabolism; catabolism, anabolism, stress responses, and many other cell functions. A major problem facing microbial functional genomics is proposed here to derive from the breadth of microbial metabolism, much of which remains undiscovered. The breadth of microbial metabolism has been surveyed by the PIs and represented according to reaction types on the University of Minnesota Biocatalysis/Biodegradation Database (UM-BBD): http://umbbd.ahc.umn.edu/search/FuncGrps.html The database depicts metabolism of 49 chemical functional groups, representing most of current knowledge. Twice that number of chemical groups are proposed here to be metabolized by microbes. Thus, at least 50% of the unique biochemical reactions catalyzed by microbes remain undiscovered. This further suggests that many unknown and hypothetical genes encode functions yet undiscovered. This gap will be partly filled by the current proposal. The UM-BBD will be greatly expanded as a resource for microbial functional genomics. Computational methods will be developed to predict microbial metabolism which is not yet discovered. Moreover, a concentrated effort to discover new microbial metabolism will be conducted. The research will focus on metabolism of direct interest to DOE, dealing with the transformation of metals, metalloids, organometallics and toxic organics. This is precisely the type of metabolism which has been characterized most poorly to date. Moreover, these studies will directly impact functional genomic analysis of DOE-relevant genomes.

  1. Anaerobic bio-removal of uranium (VI) and chromium (VI): Comparison of microbial community structure

    Energy Technology Data Exchange (ETDEWEB)

    Martins, Monica [Centro de Ciencias do Mar, Universidade do Algarve, Campus de Gambelas, 8005-139 Faro (Portugal); Faleiro, Maria Leonor [IBB - Centro de Biomedicina Molecular e Estrutural, Universidade do Algarve, Campus de Gambelas, 8005-139 Faro (Portugal); Chaves, Sandra; Tenreiro, Rogerio [Universidade de Lisboa, Faculdade de Ciencias, Centro de Biodiversidade, Genomica Integrativa e Funcional (BioFIG), Campus de FCUL, Campo Grande 1749-016 Lisboa (Portugal); Santos, Erika [Centro de Ciencias do Mar, Universidade do Algarve, Campus de Gambelas, 8005-139 Faro (Portugal); Costa, Maria Clara, E-mail: mcorada@ualg.pt [Centro de Ciencias do Mar, Universidade do Algarve, Campus de Gambelas, 8005-139 Faro (Portugal)

    2010-04-15

    Several microbial communities, obtained from uranium contaminated and non-contaminated samples, were investigated for their ability to remove uranium (VI) and the cultures capable for this removal were further assessed on their efficiency for chromium (VI) removal. The highest efficiency for removal of both metals was observed on a consortium from a non-contaminated soil collected in Monchique thermal place, which was capable to remove 91% of 22 mg L{sup -1} U(VI) and 99% of 13 mg L{sup -1} Cr(VI). This study revealed that uranium (VI) removing communities have also ability to remove chromium (VI), but when uranium (VI) was replaced by chromium (VI) several differences in the structure of all bacterial communities were observed. TGGE and phylogenetic analysis of 16S rRNA gene showed that the uranium (VI) removing bacterial consortia are mainly composed by members of Rhodocyclaceae family and Clostridium genus. On the other hand, bacteria from Enterobacteriaceae family were detected in the community with ability for chromium (VI) removal. The existence of members of Enterobacteriaceae and Rhodocyclaceae families never reported as chromium or uranium removing bacteria, respectively, is also a relevant finding, encouraging the exploitation of microorganisms with new abilities that can be useful for bioremediation.

  2. Comparing mesophilic and thermophilic anaerobic digestion of chicken manure: Microbial community dynamics and process resilience.

    Science.gov (United States)

    Niu, Qigui; Takemura, Yasuyuki; Kubota, Kengo; Li, Yu-You

    2015-09-01

    While methane fermentation is considered as the most successful bioenergy treatment for chicken manure, the relationship between operational performance and the dynamic transition of archaeal and bacterial communities remains poorly understood. Two continuous stirred-tank reactors were investigated under thermophilic and mesophilic conditions feeding with 10%TS. The tolerance of thermophilic reactor on total ammonia nitrogen (TAN) was found to be 8000mg/L with free ammonia (FA) 2000mg/L compared to 16,000mg/L (FA1500mg/L) of mesophilic reactor. Biomethane production was 0.29 L/gVSin in the steady stage and decreased following TAN increase. After serious inhibition, the mesophilic reactor was recovered successfully by dilution and washing stratagem compared to the unrecoverable of thermophilic reactor. The relationship between the microbial community structure, the bioreactor performance and inhibitors such as TAN, FA, and volatile fatty acid was evaluated by canonical correspondence analysis. The performance of methanogenic activity and substrate removal efficiency were changed significantly correlating with the community evenness and phylogenetic structure. The resilient archaeal community was found even after serious inhibition in both reactors. Obvious dynamics of bacterial communities were observed in acidogenic and hydrolytic functional bacteria following TAN variation in the different stages. PMID:26054964

  3. Anaerobic bio-removal of uranium (VI) and chromium (VI): Comparison of microbial community structure

    International Nuclear Information System (INIS)

    Several microbial communities, obtained from uranium contaminated and non-contaminated samples, were investigated for their ability to remove uranium (VI) and the cultures capable for this removal were further assessed on their efficiency for chromium (VI) removal. The highest efficiency for removal of both metals was observed on a consortium from a non-contaminated soil collected in Monchique thermal place, which was capable to remove 91% of 22 mg L-1 U(VI) and 99% of 13 mg L-1 Cr(VI). This study revealed that uranium (VI) removing communities have also ability to remove chromium (VI), but when uranium (VI) was replaced by chromium (VI) several differences in the structure of all bacterial communities were observed. TGGE and phylogenetic analysis of 16S rRNA gene showed that the uranium (VI) removing bacterial consortia are mainly composed by members of Rhodocyclaceae family and Clostridium genus. On the other hand, bacteria from Enterobacteriaceae family were detected in the community with ability for chromium (VI) removal. The existence of members of Enterobacteriaceae and Rhodocyclaceae families never reported as chromium or uranium removing bacteria, respectively, is also a relevant finding, encouraging the exploitation of microorganisms with new abilities that can be useful for bioremediation.

  4. Development and application of an enzymatic and cell flotation treatment for the recovery of viable microbial cells from environmental matrices such as anaerobic sludge.

    Science.gov (United States)

    Braun, Florence; Hamelin, Jérôme; Gévaudan, Gaëlle; Patureau, Dominique

    2011-12-01

    Efficient dissociation of microorganisms from their aggregate matrix is required to study the microorganisms without interaction with their native environment (e.g., biofilms, flocs, granules, etc.) and to assess their community composition through the application of molecular or microscopy techniques. To this end, we combined enzymatic treatments and a cell extraction by density gradient to efficiently recover anaerobic microorganisms from urban wastewater treatment plant sludge. The enzymes employed (amylase, cellulase, DNase, and pectinase) as a pretreatment softly disintegrated the extrapolymeric substances (EPS) interlocked with the microorganisms. The potential damaging effects of the applied procedure on bacterial and archaeal communities were assessed by studying the variations in density (using quantitative PCR), diversity (using capillary electrophoresis single-strand conformation polymorphism fingerprinting [CE-SSCP]), and activity (using a standard anaerobic activity test) of the extracted microorganisms. The protocol preserved the general capacity of the microbial community to produce methane under anaerobic conditions and its diversity; particularly the archaeal community was not affected in terms of either density or structure. This cell extraction procedure from the matrix materials offers interesting perspectives for metabolic, microscopic, and molecular assays of microbial communities present in complex matrices constituted by bioaggregates or biofilms. PMID:22003005

  5. Effects of cattle grazing, trampling and excrement deposition on microbial nitrogen transformations in upland soil

    Czech Academy of Sciences Publication Activity Database

    Šimek, Miloslav; Čuhel, Jiří

    Singapore : World Scientific Publishing, 2009, s. 29-32. ISBN 978-981-283-754-7. [Current Research Topics in Applied Microbiology and Microbial Biotechnology. International Conference on Environmental, Industrial and Applied Microbiology (BioMicroWorld 2007) /2./. Seville (ES), 28.11.2007-01.12.2007] R&D Projects: GA AV ČR IAA600660605 Institutional research plan: CEZ:AV0Z60660521 Keywords : nitrogen transformations * denitrification * enzyme activity Subject RIV: EH - Ecology, Behaviour

  6. Development of microbial trigger based oral formulation of Tinidazole and its Gamma Scintigraphy Evaluation: A promising tool against anaerobic microbes associated GI problems.

    Science.gov (United States)

    Sharma, Braj Gaurav; Kumar, Neeraj; Nishad, Dhruv Kumar; Khare, Naveen K; Bhatnagar, Aseem

    2016-06-30

    Tinidazole is a versatile anti-amoebic and anti-anaerobic drug used in treatment of intestinal infection. The aim of present study was to develop and evaluate a guar gum based novel target release Tinidazole matrix tablet in animal models and healthy human volunteer using Gamma Scintigraphy technique. Anti-anaerobic and anti-protozoal activity of the developed formulation was studied in vitro against Bacteroides fragilis and Dentamoeba fragilis. Tinidazole was successful radiolabelled with (99m)Tc-pertechnetate using stannous chloride as a reducing agent and stable up to 24h in normal saline and serum. Radiolabeled formulation was evaluated in 6 Newzealand white rabbits by gamma Scintigraphy in static manner up to 24h for its retention in gastrointestinal tract (GIT). Similar set of study was conducted in 12 healthy human volunteers for similar objective Scintigraphy images of healthy human volunteer showed retention of optimized formulations in stomach up to 60min, from where it moved to duodenum further and reached ileum in around 5h. However, initiation of drug release was observed from intestine at 7h. Complete dissociation and release of drug was observed at 24h in colon due to anaerobic microbial rich environment. Results drawn from Scintigraphy images indicate that radiolabeled (99m)Tc-Tinidazole tablet transit through upper part of GI without disintegration. Hence the developed matrix tablet may have a role in treatment of intestinal infection caused by anaerobic bacteria. PMID:27108116

  7. Microbial Nitrogen Transformations in the Oxygen Minimum Zone off Peru, 01 February 1985 to 05 March 1985 (NODC Accession 9200026)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NITROP - 85 was the major field of experiment of an N.S.F. funded program entitled "Microbial Nitrogen Transformations in the Oxygen Minimum Zone off Peru". this...

  8. Comprehensive microbial analysis of combined mesophilic anaerobic-thermophilic aerobic process treating high-strength food wastewater

    DEFF Research Database (Denmark)

    Jang, Hyun Min; Ha, Jeong Hyub; Park, Jong Moon;

    2015-01-01

    A combined mesophilic anaerobic-thermophilic aerobic process was used to treat high-strength food wastewater in this study. During the experimental period, most of solid residue from the mesophilic anaerobic reactor (R1) was separated by centrifugation and introduced into the thermophilic aerobic...

  9. Microbial Transformations of Natural Antitumor Agents: Products of Rotenone and Dihydrorotenone Transformation by Cunninghamella blakesleeana

    OpenAIRE

    1983-01-01

    Various species of Absidia, Aspergillus, Cunninghamella, Trichothecium, Penicillium, and Phanerochaete were found to transform rotenone to one or more metabolites. Two biotransformation products were isolated from a preparative-scale incubation of rotenone with Cunninghamella blakesleeana and identified as 1′,2′-dihydro-1′,2′-dihydroxyrotenone and 3′-hydroxyrotenone (amorphigenin). The catalytic reduction of the isopropylene side chain of rotenone resulted in the formation of 1′,2′-dihydrorot...

  10. Microbial succession within an anaerobic sequencing batch biofilm reactor (ASBBR treating cane vinasse at 55ºC

    Directory of Open Access Journals (Sweden)

    Maria Magdalena Ferreira Ribas

    2009-08-01

    Full Text Available The aim of this work was to investigate the anaerobic biomass formation capable of treating vinasse from the production of sugar cane alcohol, which was evolved within an anaerobic sequencing batch biofilm reactor (ASBBR as immobilized biomass on cubes of polyurethane foam at the temperature of 55ºC. The reactor was inoculated with mesophilic granular sludge originally treating poultry slaughterhouse wastewater. The evolution of the biofilm in the polyurethane foam matrices was assessed during seven experimental phases which were thus characterized by the changes in the organic matter concentrations as COD (1.0 to 20.0 g/L. Biomass characterization proceeded with the examination of sludge samples under optical and scanning electron microscopy. The reactor showed high microbial morphological diversity along the trial. The predominance of Methanosaeta-like cells was observed up to the organic load of 2.5 gCOD/L.d. On the other hand, Methanosarcinalike microorganisms were the predominant archaeal population within the foam matrices at high organic loading ratios above 3.3 gCOD/L.d. This was suggested to be associated to a higher specific rate of acetate consumption by the later organisms.Este trabalho investigou a formação de um biofilme anaeróbio capaz de tratar vinhaça da produção de álcool de cana-de-açúcar, que evoluiu dentro de um reator operado em bateladas seqüenciais com biofilme (ASBBR tendo a biomassa imobilizada em cubos de espuma de poliuretano na temperatura de 55ºC. O reator foi inoculado com lodo granular mesofílico tratando água residuária de abatedouro de aves. A evolução do biofilme nas matrizes de espuma de poliuretano foi observada durante sete fases experimentais que foram caracterizadas por mudanças nas concentrações de matéria orgânica como DQO (1,0 a 20,0 g/L. A caracterização da biomassa foi feita por exames de amostras do lodo em microscopia ótica e eletrônica de varredura. O reator apresentou

  11. Evaluation of functional microbial community's difference in full-scale and lab-scale anaerobic digesters feeding with different organic solid waste: Effects of substrate and operation factors.

    Science.gov (United States)

    Niu, Qigui; Kobayashi, Takuro; Takemura, Yasuyuki; Kubota, Kengo; Li, Yu-You

    2015-10-01

    Samples taken from the full-scale and lab-scale anaerobic digesters feeding with different organic solid waste were investigated with assessment of the substrate effects. To understand the substrate effects on the microbial community diversity, heterogeneity, and functional structure, twelve samples were analyzed by constructing 16S rRNA gene clone libraries and statistical analysis. Microbial diversity varied according to substrate types and operating parameters. With acetoclastic methanogen of genus Methanosaeta predominated in full scale and Methanosarcina predominated in the lab-scale digesters, a significant difference archaeal communities were found. Principal component analysis clearly indicates that both bacterial and archaeal communities create independent clusters according to substrate types. However, the relationship between acetogenic bacteria and the acetoclastic methanogens had a similar variation tends in most of full-scale and lab-scale reactors. Canonical correlation analysis and variance partitioning analysis implied that bacterial and archaeal community variations were significantly affected by substrate and the operation conditions. PMID:26119052

  12. Performance and microbial community analysis of the anaerobic reactor with coke oven gas biomethanation and in situ biogas upgrading

    DEFF Research Database (Denmark)

    Wang, Wen; Xie, Li; Luo, Gang;

    2013-01-01

    A new method for simultaneous coke oven gas (COG) biomethanation and in situ biogas upgrading in anaerobic reactor was developed in this study. The simulated coke oven gas (SCOG) (92% H2 and 8% CO) was injected directly into the anaerobic reactor treating sewage sludge through hollow fiber membrane...... (HFM). With pH control at 8.0, the added H2 and CO were fully consumed and no negative effects on the anaerobic degradation of sewage sludge were observed. The maximum CH4 content in the biogas was 99%. The addition of SCOG resulted in enrichment and dominance of homoacetogenetic genus Treponema...

  13. Microbial transformation of biomacromolecules in a membrane bioreactor: implications for membrane fouling investigation.

    Directory of Open Access Journals (Sweden)

    Zhongbo Zhou

    Full Text Available BACKGROUND: The complex characteristics and unclear biological fate of biomacromolecules (BMM, including colloidal and soluble microbial products (SMP, extracellular polymeric substances (EPS and membrane surface foulants (MSF, are crucial factors that limit our understanding of membrane fouling in membrane bioreactors (MBRs. FINDINGS: In this study, the microbial transformation of BMM was investigated in a lab-scale MBR by well-controlled bioassay tests. The results of experimental measurements and mathematical modeling show that SMP, EPS, and MSF had different biodegradation behaviors and kinetic models. Based on the multi-exponential G models, SMP were mainly composed of slowly biodegradable polysaccharides (PS, proteins (PN, and non-biodegradable humic substances (HS. In contrast, EPS contained a large number of readily biodegradable PN, slowly biodegradable PS and HS. MSF were dominated by slowly biodegradable PS, which had a degradation rate constant similar to that of SMP-PS, while degradation behaviors of MSF-PN and MSF-HS were much more similar to those of EPS-PN and EPS-HS, respectively. In addition, the large-molecular weight (MW compounds (>100 kDa in BMM were found to have a faster microbial transformation rate compared to the small-MW compounds (<5 kDa. The parallel factor (PARAFAC modeling of three-dimensional fluorescence excitation-emission matrix (EEM spectra showed that the tryptophan-like PN were one of the major fractions in the BMM and they were more readily biodegradable than the HS. Besides microbial mineralization, humification and hydrolysis could be viewed as two important biotransformation mechanisms of large-MW compounds during the biodegradation process. SIGNIFICANCE: The results of this work can aid in tracking the origin of membrane foulants from the perspective of the biotransformation behaviors of SMP, EPS, and MSF.

  14. Microbial anaerobic digestion (bio-digesters) as an approach to the decontamination of animal wastes in pollution control and the generation of renewable energy.

    Science.gov (United States)

    Manyi-Loh, Christy E; Mamphweli, Sampson N; Meyer, Edson L; Okoh, Anthony I; Makaka, Golden; Simon, Michael

    2013-09-01

    With an ever increasing population rate; a vast array of biomass wastes rich in organic and inorganic nutrients as well as pathogenic microorganisms will result from the diversified human, industrial and agricultural activities. Anaerobic digestion is applauded as one of the best ways to properly handle and manage these wastes. Animal wastes have been recognized as suitable substrates for anaerobic digestion process, a natural biological process in which complex organic materials are broken down into simpler molecules in the absence of oxygen by the concerted activities of four sets of metabolically linked microorganisms. This process occurs in an airtight chamber (biodigester) via four stages represented by hydrolytic, acidogenic, acetogenic and methanogenic microorganisms. The microbial population and structure can be identified by the combined use of culture-based, microscopic and molecular techniques. Overall, the process is affected by bio-digester design, operational factors and manure characteristics. The purpose of anaerobic digestion is the production of a renewable energy source (biogas) and an odor free nutrient-rich fertilizer. Conversely, if animal wastes are accidentally found in the environment, it can cause a drastic chain of environmental and public health complications. PMID:24048207

  15. Microbial Anaerobic Digestion (Bio-Digesters as an Approach to the Decontamination of Animal Wastes in Pollution Control and the Generation of Renewable Energy

    Directory of Open Access Journals (Sweden)

    Golden Makaka

    2013-09-01

    Full Text Available With an ever increasing population rate; a vast array of biomass wastes rich in organic and inorganic nutrients as well as pathogenic microorganisms will result from the diversified human, industrial and agricultural activities. Anaerobic digestion is applauded as one of the best ways to properly handle and manage these wastes. Animal wastes have been recognized as suitable substrates for anaerobic digestion process, a natural biological process in which complex organic materials are broken down into simpler molecules in the absence of oxygen by the concerted activities of four sets of metabolically linked microorganisms. This process occurs in an airtight chamber (biodigester via four stages represented by hydrolytic, acidogenic, acetogenic and methanogenic microorganisms. The microbial population and structure can be identified by the combined use of culture-based, microscopic and molecular techniques. Overall, the process is affected by bio-digester design, operational factors and manure characteristics. The purpose of anaerobic digestion is the production of a renewable energy source (biogas and an odor free nutrient-rich fertilizer. Conversely, if animal wastes are accidentally found in the environment, it can cause a drastic chain of environmental and public health complications.

  16. Microbial ecology overview during anaerobic codigestion of dairy wastewater and cattle manure and use in agriculture of obtained bio-fertilisers.

    Science.gov (United States)

    Toumi, Jihen; Miladi, Baligh; Farhat, Amel; Nouira, Said; Hamdi, Moktar; Gtari, Maher; Bouallagui, Hassib

    2015-12-01

    The anaerobic co-digestion of dairy wastewater (DW) and cattle manure (CM) was examined and associated with microbial community's structures using Denaturing Gradient Gel Electrophoresis (DGGE). The highest volatile solids (VS) reduction yield of 88.6% and biogas production of 0.87 L/g VS removed were obtained for the C/N ratio of 24.7 at hydraulic retention time (HRT) of 20 days. The bacterial DGGE profile showed significant abundance of Uncultured Bacteroidetes, Firmicutes and Synergistetes bacterium. The Syntrophomonas strains were discovered in dependent association to H2-using bacteria such as Methanospirillum sp., Methanosphaera sp. and Methanobacterium formicicum. These syntrophic associations are essential in anaerobic digesters allow them to keep low hydrogen partial pressure. However, high concentrations of VFA produced from dairy wastes acidification allow the growth of Methanosarcina species. The application of the stabilised anaerobic effluent on the agriculture soil showed significant beneficial effects on the forage corn and tomato plants growth and crops. PMID:26386416

  17. Effect of heterogeneous Fenton-like pre-treatment on anaerobic granular sludge performance and microbial community for the treatment of traditional Chinese medicine wastewater.

    Science.gov (United States)

    Su, Chengyuan; Li, Weiguang; Lu, Yuxiang; Chen, Menglin; Huang, Zhi

    2016-08-15

    The effect of a heterogeneous Fenton-like pre-treatment on the anaerobic processes, characteristics and microbial community of sludge was investigated for traditional Chinese medicine (TCM) wastewater containing rhein. When the concentrations of rhein were 50mg/L and 100mg/L, the toxic effect was physiological toxicity for anaerobic granular sludge. Using a single double circle (DC) reactor for the treatment of TCM wastewater containing rhein at concentrations of 15-20mg/L, the chemical oxygen demand (COD) removal rate was 69%, and coenzyme F420 was nearly undetectable in the 3D-excitation-emission matrix (EEM) spectra of soluble microbial products (SMP). The abundances of Methanoregula, Methanobacterium, Methanosphaerula were only 5.57%, 2.39% and 1.08% in the DC reactor, respectively. TCM wastewater containing rhein could be successfully treated by the combination of the heterogeneous Fenton-like pre-treatment and the DC reactor processes, and the COD removal rate reached 95%. Meanwhile, the abundances of Methanoregula, Methanobacterium, Methanosphaerula increased to 22.5%, 18.5%, and 13.87%, respectively. For the bacterial community, the abundance of Acidobacteria_Gp6 decreased from 6.99% to 1.07%, while the abundances of Acidobacteria_Gp1 and Acidobacteria_Gp2 increased from 1.61% to 6.55% and from 1.28% to 5.87%, respectively. PMID:27107235

  18. Volume ratios between the thermophilic and the mesophilic digesters of a temperature-phased anaerobic digestion system affect their performance and microbial communities.

    Science.gov (United States)

    Lv, Wen; Zhang, Wenfei; Yu, Zhongtang

    2016-01-25

    An experimental temperature-phased anaerobic digestion (TPAD) system, with the thermophilic digester operated at neutral pH and with a balanced acidogenesis and methanogenesis (referred to as NT-TPAD), was evaluated with respect to the microbial communities and population dynamics of methanogens when digesting dairy cattle manure at 15-day overall system hydraulic retention time (HRT). When fed a manure slurry of 10% total solid (TS), similar system performance, 36-38% volatile solid (VS) removal and 0.21-0.22 L methane g(-1) VS fed, was achieved between a 5-day and 7.5-day HRT for the thermophilic digester. However, the thermophilic digester achieved a greater volumetric biogas yield when operated at a 5-day RT than at a 7.5-day HRT (6.3 vs. 4.7 L/L/d), while the mesophilic digester had a stable volumetric biogas yield (about 1.0 L/L/d). Each of the digesters harbored distinct yet dynamic microbial populations, and some of the methanogens were significantly correlated with methane productions. Methanosarcina and Methanosaeta were the most important methanogenic genera in the thermophilic and the mesophilic digesters, respectively. The microbiological findings may help understand the metabolism that underpins the anaerobic processes within each of the two digesters of TPAD systems when fed dairy manure. PMID:26232524

  19. Microbial community structure and diversity in an integrated system of anaerobic-aerobic reactors and a constructed wetland for the treatment of tannery wastewater in Modjo, Ethiopia.

    Directory of Open Access Journals (Sweden)

    Adey Feleke Desta

    Full Text Available A culture-independent approach was used to elucidate the microbial diversity and structure in the anaerobic-aerobic reactors integrated with a constructed wetland for the treatment of tannery wastewater in Modjo town, Ethiopia. The system has been running with removal efficiencies ranging from 94%-96% for COD, 91%-100% for SO4(2- and S(2-, 92%-94% for BOD, 56%-82% for total Nitrogen and 2%-90% for NH3-N. 16S rRNA gene clone libraries were constructed and microbial community assemblies were determined by analysis of a total of 801 unique clone sequences from all the sites. Operational Taxonomic Unit (OTU--based analysis of the sequences revealed highly diverse communities in each of the reactors and the constructed wetland. A total of 32 phylotypes were identified with the dominant members affiliated to Clostridia (33%, Betaproteobacteria (10%, Bacteroidia (10%, Deltaproteobacteria (9% and Gammaproteobacteria (6%. Sequences affiliated to the class Clostridia were the most abundant across all sites. The 801 sequences were assigned to 255 OTUs, of which 3 OTUs were shared among the clone libraries from all sites. The shared OTUs comprised 80 sequences belonging to Clostridiales Family XIII Incertae Sedis, Bacteroidetes and unclassified bacterial group. Significantly different communities were harbored by the anaerobic, aerobic and rhizosphere sites of the constructed wetland. Numerous representative genera of the dominant bacterial classes obtained from the different sample sites of the integrated system have been implicated in the removal of various carbon- containing pollutants of natural and synthetic origins. To our knowledge, this is the first report of microbial community structure in tannery wastewater treatment plant from Ethiopia.

  20. Microbial Community Structure and Diversity in an Integrated System of Anaerobic-Aerobic Reactors and a Constructed Wetland for the Treatment of Tannery Wastewater in Modjo, Ethiopia

    Science.gov (United States)

    Desta, Adey Feleke; Assefa, Fassil; Leta, Seyoum; Stomeo, Francesca; Wamalwa, Mark; Njahira, Moses; Appolinaire, Djikeng

    2014-01-01

    A culture-independent approach was used to elucidate the microbial diversity and structure in the anaerobic-aerobic reactors integrated with a constructed wetland for the treatment of tannery wastewater in Modjo town, Ethiopia. The system has been running with removal efficiencies ranging from 94%–96% for COD, 91%–100% for SO42- and S2-, 92%–94% for BOD, 56%–82% for total Nitrogen and 2%–90% for NH3-N. 16S rRNA gene clone libraries were constructed and microbial community assemblies were determined by analysis of a total of 801 unique clone sequences from all the sites. Operational Taxonomic Unit (OTU) - based analysis of the sequences revealed highly diverse communities in each of the reactors and the constructed wetland. A total of 32 phylotypes were identified with the dominant members affiliated to Clostridia (33%), Betaproteobacteria (10%), Bacteroidia (10%), Deltaproteobacteria (9%) and Gammaproteobacteria (6%). Sequences affiliated to the class Clostridia were the most abundant across all sites. The 801 sequences were assigned to 255 OTUs, of which 3 OTUs were shared among the clone libraries from all sites. The shared OTUs comprised 80 sequences belonging to Clostridiales Family XIII Incertae Sedis, Bacteroidetes and unclassified bacterial group. Significantly different communities were harbored by the anaerobic, aerobic and rhizosphere sites of the constructed wetland. Numerous representative genera of the dominant bacterial classes obtained from the different sample sites of the integrated system have been implicated in the removal of various carbon- containing pollutants of natural and synthetic origins. To our knowledge, this is the first report of microbial community structure in tannery wastewater treatment plant from Ethiopia. PMID:25541981

  1. Microbial community structure reveals how microaeration improves fermentation during anaerobic co-digestion of brown water and food waste.

    Science.gov (United States)

    Lim, Jun Wei; Chiam, Jun An; Wang, Jing-Yuan

    2014-11-01

    The purpose of this study was to investigate the impact of microaeration on the fermentation process during anaerobic co-digestion of brown water (BW) and food waste (FW). This was achieved by daily monitoring of reactor performance and the determination of its bacterial consortium towards the end of the study. Molecular cloning and sequencing results revealed that bacteria within phyla Firmicutes and Bacteriodetes represented the dominant phylogenetic group. As compared to anaerobic conditions, the fermentation of BW and FW under microaeration conditions gave rise to a significantly more diverse bacterial population and higher proportion of bacterial clones affiliated to the phylum Firmicutes. The acidogenic reactor was therefore able to metabolize a greater variety of substrates leading to higher hydrolysis rates as compared to the anaerobic reactor. Other than enhanced fermentation, microaeration also led to a shift in fermentation production pattern where acetic acid was metabolized for the synthesis of butyric acid. PMID:25194261

  2. Fermentative Hydrogen Production from Combination of Tofu processing and anaerobic digester sludge wastes using a microbial consortium

    Energy Technology Data Exchange (ETDEWEB)

    You-Kwan, O.; Mi-Sun, K.

    2009-07-01

    The combination of Tofu manufacturing waste and anaerobic digester sludge was studied for fermentative H{sub 2} production in batch and continuous modes using a mixed culture originated from sewage. In order to increase the solubilization of organic substrates from Tofu waste, various pretreatments including heat-treatment, acid/alkali treatment, and sonication were examined alone or in combination with others. (Author)

  3. Microbial community structure in a thermophilic aerobic digester used as a sludge pretreatment process for the mesophilic anaerobic digestion and the enhancement of methane production.

    Science.gov (United States)

    Jang, Hyun Min; Park, Sang Kyu; Ha, Jeong Hyub; Park, Jong Moon

    2013-10-01

    An effective two-stage sewage sludge digestion process, consisting of thermophilic aerobic digestion (TAD) followed by mesophilic anaerobic digestion (MAD), was developed for efficient sludge reduction and methane production. Using TAD as a biological pretreatment, the total volatile suspended solid reduction (VSSR) and methane production rate (MPR) in the MAD reactor were significantly improved. According to denaturing gradient gel electrophoresis (DGGE) analysis, the results indicated that the dominant bacteria species such as Ureibacillus thermophiles and Bacterium thermus in TAD were major routes for enhancing soluble organic matter. TAD pretreatment using a relatively short SRT of 1 day showed highly increased soluble organic products and positively affected an increment of bacteria populations which performed interrelated microbial metabolisms with methanogenic species in the MAD; consequently, a quantitative real-time PCR indicated greatly increased Methanosarcinales (acetate-utilizing methanogens) in the MAD, resulting in enhanced methane production. PMID:23419990

  4. Reactor performance and microbial community dynamics during anaerobic co-digestion of municipal wastewater sludge with restaurant grease waste at steady state and overloading stages.

    Science.gov (United States)

    Razaviarani, Vahid; Buchanan, Ian D

    2014-11-01

    Linkage between reactor performance and microbial community dynamics was investigated during mesophilic anaerobic co-digestion of restaurant grease waste (GTW) with municipal wastewater sludge (MWS) using 10L completely mixed reactors and a 20day SRT. Test reactors received a mixture of GTW and MWS while control reactors received only MWS. Addition of GTW to the test reactors enhanced the biogas production and methane yield by up to 65% and 120%, respectively. Pyrosequencing revealed that Methanosaeta and Methanomicrobium were the dominant acetoclastic and hydrogenotrophic methanogen genera, respectively, during stable reactor operation. The number of Methanosarcina and Methanomicrobium sequences increased and that of Methanosaeta declined when the proportion of GTW in the feed was increased to cause an overload condition. Under this overload condition, the pH, alkalinity and methane production decreased and VFA concentrations increased dramatically. Candidatus cloacamonas, affiliated within phylum Spirochaetes, were the dominant bacterial genus at all reactor loadings. PMID:25265327

  5. Methanosarcina Play an Important Role in Anaerobic Co-Digestion of the Seaweed Ulva lactuca: Taxonomy and Predicted Metabolism of Functional Microbial Communities.

    Directory of Open Access Journals (Sweden)

    Jamie A FitzGerald

    Full Text Available Macro-algae represent an ideal resource of third generation biofuels, but their use necessitates a refinement of commonly used anaerobic digestion processes. In a previous study, contrasting mixes of dairy slurry and the macro-alga Ulva lactuca were anaerobically digested in mesophilic continuously stirred tank reactors for 40 weeks. Higher proportions of U. lactuca in the feedstock led to inhibited digestion and rapid accumulation of volatile fatty acids, requiring a reduced organic loading rate. In this study, 16S pyrosequencing was employed to characterise the microbial communities of both the weakest (R1 and strongest (R6 performing reactors from the previous work as they developed over a 39 and 27-week period respectively. Comparing the reactor communities revealed clear differences in taxonomy, predicted metabolic orientation and mechanisms of inhibition, while constrained canonical analysis (CCA showed ammonia and biogas yield to be the strongest factors differentiating the two reactor communities. Significant biomarker taxa and predicted metabolic activities were identified for viable and failing anaerobic digestion of U. lactuca. Acetoclastic methanogens were inhibited early in R1 operation, followed by a gradual decline of hydrogenotrophic methanogens. Near-total loss of methanogens led to an accumulation of acetic acid that reduced performance of R1, while a slow decline in biogas yield in R6 could be attributed to inhibition of acetogenic rather than methanogenic activity. The improved performance of R6 is likely to have been as a result of the large Methanosarcina population, which enabled rapid removal of acetic acid, providing favourable conditions for substrate degradation.

  6. Microbial transformations of uranium in wastes and implication on its mobility

    Energy Technology Data Exchange (ETDEWEB)

    Suzuki,Y.; Nankawa, T.; Ozaki, T.; Ohnuki, T.; Francis, A.J.; Enokida, Y.; Yamamoto, I.

    2008-09-14

    Uranium exists in several chemical forms in mining and mill tailings and in nuclear and weapons production wastes. Under appropriate conditions, microorganisms can affect the stability and mobility of U in wastes by altering the chemical speciation, solubility and sorption properties and thus could increase or decrease the concentrations of U in solution and the bioavailability. Dissolution or immobilization of U is brought about by direct enzymatic action or indirect nonenzymatic action of microorganisms. Although the physical, chemical, and geochemical processes affecting dissolution, precipitation, and mobilization of U have been extensively investigated, we have only limited information on the mechanisms of microbial transformations of various chemical forms of U in the presence of electron donors and acceptors.

  7. Microbial transformation of (+)-nootkatone and the antiproliferative activity of its metabolites.

    Science.gov (United States)

    Gliszczyńska, Anna; Łysek, Agnieszka; Janeczko, Tomasz; Świtalska, Marta; Wietrzyk, Joanna; Wawrzeńczyk, Czesław

    2011-04-01

    Six metabolites were obtained as a result of microbial transformation of (+)-nootkatone (1) by the fungal strains: Botrytis, Didymosphaeria, Aspergillus, Chaetomium and Fusarium. Their structure were established as (+)-(4R,5S,7R,9R)-9α-hydroxynootkatone (2), (+)-(4R,5S,7R)-13-hydroxynootkatone (3) and (+)-(4R,5S,7R,9R,11S)-11,12-epoxy-9α-hydroxynootkatone (4), (+)-(4R,5S,7R,11S)-11,12-epoksynootkatone (5), (+)-(4R,5S,7R)-11,12-dihydroxynootkatone (6) and (+)-(4R,5S,7R)-7,11,12-trihydroxynootkatone (7) on the basis of their spectral data. Two products: (4) and (7) were not previously reported in the literature. The antiproliferative activity of (+)-nootkatone (1) and isolated metabolites (2-7) of its biotransformation has been evaluated. PMID:21377882

  8. Anoxic carbon degradation in Arctic sediments: Microbial transformations of complex substrates

    DEFF Research Database (Denmark)

    Arnosti, Carol; Finke, Niko; Larsen, Ole;

    2005-01-01

    Complex substrates are degraded in anoxic sediments by the concerted activities of diverse microbial communities. To explore the effects of substrate complexity on carbon transformations in permanently cold anoxic sediments, four substrates—Spirulina cells, Isochrysis cells, and soluble high...... of carbon degradation diverged, with an additional 43%, 32%, 33%, and 8% of Isochrysis, Iso-Ex, Spirulina, and Spir-Ex carbon respired to CO2 over the next 750 h of incubation. Somewhat surprisingly, the soluble, carbohydrate-rich extracts did not prove to be more labile substrates than the whole...... cells from which they were derived. Although Spirulina and Iso-Ex differed in physical and chemical characteristics (solid/soluble, C/N ratio, lipid and carbohydrate content), nearly identical quantities of carbon were respired to CO2. In contrast, only 15% of Spir-Ex carbon was respired, despite the...

  9. Antimicrobial Activity and Microbial Transformation of Ethyl p-Methoxycinnamate Extracted from Kaempferia galanga

    Directory of Open Access Journals (Sweden)

    Muhammad Nor Omar

    2014-09-01

    Full Text Available Ethyl p-methoxycinnamate (EPMC, a major constituent of the Kaempferia galanga rhizome, was transformed to ethyl p-hydroxycinnamate (EPHC using Aspergillus niger. The EPHC metabolite was elucidated by NMR spectroscopic technique. Antimicrobial microbial study found that EPHC was active against all strains tested with a good minimum inhibitory concentration (MIC. It was active against both Staphylococcus aureus and Bacillus cereus at MIC 333 µg/ml while against Pseudomonas aeruginosa, Escherichia coli and Candida albicans at MIC 111 µg/ml. It was also shown that EPHC exhibited more growth inhibition potential than EPMC. Besides that, EPHC has shown the minimum bactericidal concentration (MBC toward B. cereus, P. aeruginosa and E. coli at the concentration of 1000 µg/mL while EPMC did not show killing potential toward the tested microorganisms.

  10. Microbial Transformation of TRU and Mixed Waste: Actinide Speciation and Waste Volume

    Energy Technology Data Exchange (ETDEWEB)

    Halada, Gary P

    2008-04-10

    In order to understand the susceptibility of transuranic and mixed waste to microbial degradation (as well as any mechanism which depends upon either complexation and/or redox of metal ions), it is essential to understand the association of metal ions with organic ligands present in mixed wastes. These ligands have been found in our previous EMSP study to limit electron transfer reactions and strongly affect transport and the eventual fate of radionuclides in the environment. As transuranic waste (and especially mixed waste) will be retained in burial sites and in legacy containment for (potentially) many years while awaiting treatment and removal (or remaining in place under stewardship agreements at government subsurface waste sites), it is also essential to understand the aging of mixed wastes and its implications for remediation and fate of radionuclides. Mixed waste containing actinides and organic materials are especially complex and require extensive study. The EMSP program described in this report is part of a joint program with the Environmental Sciences Department at Brookhaven National Laboratory. The Stony Brook University portion of this award has focused on the association of uranium (U(VI)) and transuranic analogs (Ce(III) and Eu(III)) with cellulosic materials and related compounds, with development of implications for microbial transformation of mixed wastes. The elucidation of the chemical nature of mixed waste is essential for the formulation of remediation and encapsulation technologies, for understanding the fate of contaminant exposed to the environment, and for development of meaningful models for contaminant storage and recovery.

  11. Enhanced methane production in an anaerobic digestion and microbial electrolysis cell coupled system with co-cultivation of Geobacter and Methanosarcina.

    Science.gov (United States)

    Yin, Qi; Zhu, Xiaoyu; Zhan, Guoqiang; Bo, Tao; Yang, Yanfei; Tao, Yong; He, Xiaohong; Li, Daping; Yan, Zhiying

    2016-04-01

    The anaerobic digestion (AD) and microbial electrolysis cell (MEC) coupled system has been proved to be a promising process for biomethane production. In this paper, it was found that by co-cultivating Geobacter with Methanosarcina in an AD-MEC coupled system, methane yield was further increased by 24.1%, achieving to 360.2mL/g-COD, which was comparable to the theoretical methane yield of an anaerobic digester. With the presence of Geobacter, the maximum chemical oxygen demand (COD) removal rate (216.8mg COD/(L·hr)) and current density (304.3A/m(3)) were both increased by 1.3 and 1.8 fold compared to the previous study without Geobacter, resulting in overall energy efficiency reaching up to 74.6%. Community analysis demonstrated that Geobacter and Methanosarcina could coexist together in the biofilm, and the electrochemical activities of both were confirmed by cyclic voltammetry. Our study observed that the carbon dioxide content in total gas generated from the AD reactor with Geobacter was only half of that generated from the same reactor without Geobacter, suggesting that Methanosarcina may obtain the electron transferred from Geobacter for the reduction of carbon dioxide to methane. Taken together, Geobacter not only can improve the performance of the MEC system, but also can enhance methane production. PMID:27090713

  12. The Analysis of a Microbial Community in the UV/O3-Anaerobic/Aerobic Integrated Process for Petrochemical Nanofiltration Concentrate (NFC) Treatment by 454-Pyrosequencing

    Science.gov (United States)

    Wei, Chao; He, Wenjie; Wei, Li; Li, Chunying; Ma, Jun

    2015-01-01

    In this study, high-throughput pyrosequencing was applied on the analysis of the microbial community of activated sludge and biofilm in a lab-scale UV/O3- anaerobic/aerobic (A/O) integrated process for the treatment of petrochemical nanofiltration concentrate (NFC) wastewater. NFC is a type of saline wastewater with low biodegradability. From the anaerobic activated sludge (Sample A) and aerobic biofilm (Sample O), 59,748 and 51,231 valid sequence reads were obtained, respectively. The dominant phylotypes related to the metabolism of organic compounds, polycyclic aromatic hydrocarbon (PAH) biodegradation, assimilation of carbon from benzene, and the biodegradation of nitrogenous organic compounds were detected as genus Clostridium, genera Pseudomonas and Stenotrophomonas, class Betaproteobacteria, and genus Hyphomicrobium. Furthermore, the nitrite-oxidising bacteria Nitrospira, nitrite-reducing and sulphate-oxidising bacteria (NR-SRB) Thioalkalivibrio were also detected. In the last twenty operational days, the total Chemical Oxygen Demand (COD) and Total Organic Carbon (TOC) removal efficiencies on average were 64.93% and 62.06%, respectively. The removal efficiencies of ammonia nitrogen and Total Nitrogen (TN) on average were 90.51% and 75.11% during the entire treatment process. PMID:26461260

  13. The Analysis of a Microbial Community in the UV/O3-Anaerobic/Aerobic Integrated Process for Petrochemical Nanofiltration Concentrate (NFC Treatment by 454-Pyrosequencing.

    Directory of Open Access Journals (Sweden)

    Chao Wei

    Full Text Available In this study, high-throughput pyrosequencing was applied on the analysis of the microbial community of activated sludge and biofilm in a lab-scale UV/O3- anaerobic/aerobic (A/O integrated process for the treatment of petrochemical nanofiltration concentrate (NFC wastewater. NFC is a type of saline wastewater with low biodegradability. From the anaerobic activated sludge (Sample A and aerobic biofilm (Sample O, 59,748 and 51,231 valid sequence reads were obtained, respectively. The dominant phylotypes related to the metabolism of organic compounds, polycyclic aromatic hydrocarbon (PAH biodegradation, assimilation of carbon from benzene, and the biodegradation of nitrogenous organic compounds were detected as genus Clostridium, genera Pseudomonas and Stenotrophomonas, class Betaproteobacteria, and genus Hyphomicrobium. Furthermore, the nitrite-oxidising bacteria Nitrospira, nitrite-reducing and sulphate-oxidising bacteria (NR-SRB Thioalkalivibrio were also detected. In the last twenty operational days, the total Chemical Oxygen Demand (COD and Total Organic Carbon (TOC removal efficiencies on average were 64.93% and 62.06%, respectively. The removal efficiencies of ammonia nitrogen and Total Nitrogen (TN on average were 90.51% and 75.11% during the entire treatment process.

  14. Evaluation of Biogas Production Performance and Archaeal Microbial Dynamics of Corn Straw during Anaerobic Co-Digestion with Cattle Manure Liquid.

    Science.gov (United States)

    Zhang, Benyue; Zhao, Hongyan; Yu, Hairu; Chen, Di; Li, Xue; Wang, Weidong; Piao, Renzhe; Cui, Zongjun

    2016-04-28

    The rational utilization of crop straw as a raw material for natural gas production is of economic significance. In order to increase the efficiency of biogas production from agricultural straw, seasonal restrictions must be overcome. Therefore, the potential for biogas production via anaerobic straw digestion was assessed by exposing fresh, silage, and dry yellow corn straw to cow dung liquid extract as a nitrogen source. The characteristics of anaerobic corn straw digestion were comprehensively evaluated by measuring the pH, gas production, chemical oxygen demand, methane production, and volatile fatty acid content, as well as applying a modified Gompertz model and high-throughput sequencing technology to the resident microbial community. The efficiency of biogas production from fresh straw (433.8 ml/g) was higher than that of production from straw silage and dry yellow straw (46.55 ml/g and 68.75 ml/g, respectively). The cumulative biogas production from fresh straw, silage straw, and dry yellow straw was 365 l(-1) g(-1) VS, 322 l(-1) g-1 VS, and 304 l(-1) g(-1) VS, respectively, whereas cumulative methane production was 1,426.33%, 1,351.35%, and 1,286.14%, respectively, and potential biogas production was 470.06 ml(-1) g(-1) VS, 461.73 ml(-1) g(-1) VS, and 451.76 ml(-1) g(-1) VS, respectively. Microbial community analysis showed that the corn straw was mainly metabolized by acetate-utilizing methanogens, with Methanosaeta as the dominant archaeal community. These findings provide important guidance to the biogas industry and farmers with respect to rational and efficient utilization of crop straw resources as material for biogas production. PMID:26718471

  15. Anaerobic soil disinfestation and Brassica seed meal amendment alter soil microbiology and system resistance

    Science.gov (United States)

    Brassica seed meal amendments and anaerobic soil disinfestation control a spectrum of soil-borne plant pathogens via a diversity of mechanisms. Transformations in microbial community structure and function in certain instances were determinants of disease control and enhanced plant performance. Fo...

  16. Microbial mercury transformations in marine, estuarine and freshwater sediment downstream of the Idrija Mercury Mine, Slovenia

    International Nuclear Information System (INIS)

    The Idrija Mine, the second largest Hg mine in the world, ceased operation in 1995, but still delivers large quantities of Hg downstream including into the northern Adriatic Sea, 100 km away. Transformation of Hg species in sediment in sites over 60 km from the mine, including marine sites in the Adriatic Sea, was measured to determine the ability of the system to transform and mobilize Hg and to produce methylmercury (MeHg). Cores from a freshwater impoundment, a brackish estuarine site, and three marine sites in the Gulf of Trieste were sectioned anaerobically, and Hg methylation and MeHg demethylation activities determined using radio-techniques (203Hg for methylation and 14C-MeHg for demethylation). Total and dissolved Hg and MeHg were determined as were other geochemical parameters. In addition, rates of SO4 reduction were determined in marine sediment using a 35S technique. Mercury was readily methylated and demethylated at all sites. Marine sediment was investigated in winter and summer with rates of Hg transformation and SO4 reduction corresponding only in winter. Methylation of Hg in summer displayed subsurface peaks that may have been influenced by bioturbation. Total Hg and MeHg were most abundant in the freshwater, estuarine, and near-shore marine sites, but dissolved pore water Hg and MeHg were highest in the estuarine region where S cycling appeared ideal for the mobilization of Hg. The impoundment sediment also seemed to be a 'hotspot' of Hg transformations. MeHg demethylation occurred via the oxidative demethylation pathway (CO2 produced from MeHg), except in surficial sediment offshore in the Gulf during winter, where sediment was more oxidizing and significant amounts of CH4 were liberated during MeHg degradation via reductive demethylation. The CH4 formation was likely due to an increased influence from the expression of MeHg degradative enzymes encoded by the mer detoxification bacterial genetic system. The freshwater site also liberated CH4

  17. Final Report: Molecular mechanisms and kinetics of microbial anaerobic nitrate-dependent U(IV) and Fe(II) oxidation

    Energy Technology Data Exchange (ETDEWEB)

    O' Day, Peggy A. [Univ. of California, Merced, CA (United States); Asta, Maria P. [Univ. of California, Merced, CA (United States); Kanematsu, Masakazu [Univ. of California, Merced, CA (United States); Beller, Harry [Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States); Zhou, Peng [Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States); Steefel, Carl [Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)

    2015-02-27

    In this project, we combined molecular genetic, spectroscopic, and microscopic techniques with kinetic and reactive transport studies to describe and quantify biotic and abiotic mechanisms underlying anaerobic, nitrate-dependent U(IV) and Fe(II) oxidation, which influences the long-term efficacy of in situ reductive immobilization of uranium at DOE sites. In these studies, Thiobacillus denitrificans, an autotrophic bacterium that catalyzes anaerobic U(IV) and Fe(II) oxidation, was used to examine coupled oxidation-reduction processes under either biotic (enzymatic) or abiotic conditions in batch and column experiments with biogenically produced UIVO2(s). Synthesis and quantitative analysis of coupled chemical and transport processes were done with the reactive transport modeling code Crunchflow. Research focused on identifying the primary redox proteins that catalyze metal oxidation, environmental factors that influence protein expression, and molecular-scale geochemical factors that control the rates of biotic and abiotic oxidation.

  18. Evolution of microbial community along with increasing solid concentration during high-solids anaerobic digestion of sewage sludge.

    Science.gov (United States)

    Liu, Can; Li, Huan; Zhang, Yuyao; Si, Dandan; Chen, Qingwu

    2016-09-01

    High-solids anaerobic digestion (HSAD), a promising method with smaller reactor and less heating energy consumption, showed relatively lower digestion efficiency sometimes and higher tolerance to some inhibitors. To investigate the phenomena, the archaeal and bacterial communities in four anaerobic digesters treating sewage sludge with total solids (TS) of 10-19% were investigated. Although acetoclastic methanogenesis conducted mainly by genus Methanosarcina was still the main pathway producing methane, the total ratio of acetoclastic methanogens decreased along with the increased TS. In contrary, the relative abundance of hydrogenotrophic methanogens increased from 6.8% at TS 10% to 22.3% at TS 19%, and methylotrophic methanogens from 10.4% to 20.9%. The bacterial community was dominated by five phyla. Acidogenic and acetogenic bacteria affiliated to Firmicutes decreased following the increase of TS; while the proteolysis phylum Bacteroidetes increased, with a tolerant family ST-12K33 notably existing in the digesters at TS 17% and 19%. PMID:27235970

  19. Microbial Dechlorination of 2,3,5,6-Tetrachlorobiphenyl under Anaerobic Conditions in the Absence of Soil or Sediment

    OpenAIRE

    Cutter, Leah; Sowers, Kevin R.; May, Harold D.

    1998-01-01

    Bacterial enrichment cultures developed with Baltimore Harbor (BH) sediments were found to reductively dechlorinate 2,3,5,6-tetrachlorobiphenyl (2,3,5,6-CB) when incubated in a minimal estuarine medium containing short-chain fatty acids under anaerobic conditions with and without the addition of sediment. Primary enrichment cultures formed both meta and ortho dechlorination products from 2,3,5,6-CB. The lag time preceding dechlorination decreased from 30 to less than 20 days as the cultures w...

  20. Performance and microbial community analysis of the anaerobic reactor with coke oven gas biomethanation and in situ biogas upgrading.

    Science.gov (United States)

    Wang, Wen; Xie, Li; Luo, Gang; Zhou, Qi; Angelidaki, Irini

    2013-10-01

    A new method for simultaneous coke oven gas (COG) biomethanation and in situ biogas upgrading in anaerobic reactor was developed in this study. The simulated coke oven gas (SCOG) (92% H2 and 8% CO) was injected directly into the anaerobic reactor treating sewage sludge through hollow fiber membrane (HFM). With pH control at 8.0, the added H2 and CO were fully consumed and no negative effects on the anaerobic degradation of sewage sludge were observed. The maximum CH4 content in the biogas was 99%. The addition of SCOG resulted in enrichment and dominance of homoacetogenetic genus Treponema and hydrogenotrophic genus Methanoculleus in the liquid, which indicated that H2 were converted to methane by both direct (hydrogenotrophic methanogenesis) and indirect (homoacetogenesis+aceticlastic methanogenesis) pathways in the liquid. However, the aceticlasitic genus Methanosaeta was dominant for archaea in the biofilm on the HFM, which indicated indirect (homoacetogenesis+aceticlastic methanogenesis) H2 conversion pathway on the biofilm. PMID:23941705

  1. Enhanced waste activated sludge digestion using a submerged anaerobic dynamic membrane bioreactor: performance, sludge characteristics and microbial community

    Science.gov (United States)

    Yu, Hongguang; Wang, Zhiwei; Wu, Zhichao; Zhu, Chaowei

    2016-02-01

    Anaerobic digestion (AD) plays an important role in waste activated sludge (WAS) treatment; however, conventional AD (CAD) process needs substantial improvements, especially for the treatment of WAS with low solids content and poor anaerobic biodegradability. Herein, we propose a submerged anaerobic dynamic membrane bioreactor (AnDMBR) for simultaneous WAS thickening and digestion without any pretreatment. During the long-term operation, the AnDMBR exhibited an enhanced sludge reduction and improved methane production over CAD process. Moreover, the biogas generated in the AnDMBR contained higher methane content than CAD process. Stable carbon isotopic signatures elucidated the occurrence of combined methanogenic pathways in the AnDMBR process, in which hydrogenotrophic methanogenic pathway made a larger contribution to the total methane production. It was also found that organic matter degradation was enhanced in the AnDMBR, thus providing more favorable substrates for microorganisms. Pyrosequencing revealed that Proteobacteria and Bacteroidetes were abundant in bacterial communities and Methanosarcina and Methanosaeta in archaeal communities, which played an important role in the AnDMBR system. This study shed light on the enhanced digestion of WAS using AnDMBR technology.

  2. Constraints on mechanisms and rates of anaerobic oxidation of methane by microbial consortia: process-based modeling of ANME-2 archaea and sulfate reducing bacteria interactions

    Directory of Open Access Journals (Sweden)

    B. Orcutt

    2008-11-01

    Full Text Available Anaerobic oxidation of methane (AOM is the main process responsible for the removal of methane generated in Earth's marine subsurface environments. However, the biochemical mechanism of AOM remains elusive. By explicitly resolving the observed spatial arrangement of methanotrophic archaea and sulfate reducing bacteria found in consortia mediating AOM, potential intermediates involved in the electron transfer between the methane oxidizing and sulfate reducing partners were investigated via a consortium-scale reaction transport model that integrates the effect of diffusional transport with thermodynamic and kinetic controls on microbial activity. Model simulations were used to assess the impact of poorly constrained microbial characteristics such as minimum energy requirements to sustain metabolism and cell specific rates. The role of environmental conditions such as the influence of methane levels on the feasibility of H2, formate and acetate as intermediate species, and the impact of the abundance of intermediate species on pathway reversal were examined. The results show that higher production rates of intermediates via AOM lead to increased diffusive fluxes from the methane oxidizing archaea to sulfate reducing bacteria, but the build-up of the exchangeable species can cause the energy yield of AOM to drop below that required for ATP production. Comparison to data from laboratory experiments shows that under the experimental conditions of Nauhaus et al. (2007, none of the potential intermediates considered here is able to support metabolic activity matching the measured rates.

  3. Effect of thermal pretreatment on the biogas production and microbial communities balance during anaerobic digestion of urban and industrial waste activated sludge.

    Science.gov (United States)

    Ennouri, Hajer; Miladi, Baligh; Diaz, Soraya Zahedi; Güelfo, Luis Alberto Fernández; Solera, Rosario; Hamdi, Moktar; Bouallagui, Hassib

    2016-08-01

    The effect of thermal pre-treatment on the microbial populations balance and biogas production was studied during anaerobic digestion of waste activated sludge (WAS) coming from urban (US: urban sludge) and industrial (IS: industrial sludge) wastewater treatment plants (WWTP). The highest biogas yields of 0.42l/gvolatile solid (VS) removed and 0.37l/gVS removed were obtained with urban and industrial sludge pre-treated at 120°C, respectively. Fluorescent in situ hybridization (FISH) was used to quantify the major Bacteria and Archaea groups. Compared to control trails without pretreatment, Archaea content increased from 34% to 86% and from 46% to 83% for pretreated IS and US, respectively. In fact, the thermal pre-treatment of WAS enhanced the growth of hydrogen-using methanogens (HUMs), which consume rapidly the H2 generated to allow the acetogenesis. Therefore, the stable and better performance of digesters was observed involving the balance and syntrophic associations between the different microbial populations. PMID:27132226

  4. Microbial structures and community functions of anaerobic sludge in six full-scale wastewater treatment plants as revealed by 454 high-throughput pyrosequencing.

    Science.gov (United States)

    Shu, Duntao; He, Yanling; Yue, Hong; Wang, Qingyi

    2015-06-01

    The microbial communities and abundance in anaerobic sludge from 4 industrial and 2 municipal wastewater treatment plants were investigated using 454 pyrosequencing technology in this study. A total of 5482-8692 high-quality reads of 16S rRNA V3-V5 regions were obtained. Taxonomic analysis using QIIME and RDP classifier found that Proteobacteria, Bacteroidetes, Chloroflexi and Firmicutes were the most abundant phyla in these samples. Furthermore, real-time PCR was used to validate the absolute abundance of these 16S rRNAs and some functional genes, including total bacteria, anammox bacteria, NOB (Nitrobacter, Nitrospira), AOA amoA, AOB amoA, nosZ, nirS, nirK, narG, napA, nrfA, mcrA and dsrA. Multivariate linear regression analysis indicated that AOA might be mixotrophic. Finally, redundancy analysis was used to reveal the relationships between operation parameters and microbial communities. Results showed that the coexistence of anammox, denitrification and DNRA could be useful for the simultaneous removal of nitrogen and organic matter. PMID:25817026

  5. Microbiological mechanism of the improved nitrogen and phosphorus removal by embedding microbial fuel cell in Anaerobic-Anoxic-Oxic wastewater treatment process.

    Science.gov (United States)

    Xie, Beizhen; Liu, Bojie; Yi, Yue; Yang, Lige; Liang, Dawei; Zhu, Ying; Liu, Hong

    2016-05-01

    Anaerobic-Anoxic-Oxic (AA/O) wastewater treatment process is a widely used wastewater treatment process for simultaneous nitrogen and phosphorus removal. Microbial fuel cell (MFC) can generate electricity and treat the organic wastewater simultaneously. Our previous research showed that embedding MFC in AA/O wastewater treatment process could enhance the pollutants removal efficiency. However, the mechanism was not clear. In this study, a lab-scale corridor-style AA/O reactor with MFC embedded was operated and both the total nitrogen and total phosphorus removal efficiencies were enhanced. DGGE and Illumina Miseq results demonstrated that both the microbial community structures on the surface of the cathode and in the suspensions of cathode chamber have been changed. The percentage of Thauera and Emticicia, identified as denitrifying bacteria, increased significantly in the suspension liquid when the MFC was embedded in the AA/O reactor. Moreover, the genus Rheinheimera were significantly enriched on the cathode surface, which might contribute to both the nitrogen removal enhancement and electricity generation. PMID:26874439

  6. The effect of microbial sulfidogenesis on the stability of As-Fe coprecipitate with low Fe/As molar ratio under anaerobic conditions.

    Science.gov (United States)

    Wang, Shaofeng; He, Xin Yu; Pan, Rongrong; Xu, Liying; Wang, Xin; Jia, Yongfeng

    2016-04-01

    The effect of microbial sulfidogenesis on As transformation and mobilization in solid phase with low Fe/As ratio is still not well known. In this study, microbial transformation and mobilization of As in the As-Fe coprecipitate with different sulfate levels were investigated using chemical extraction and K-edge XANES of As and S. Results showed that approximately 2.7, 24.4, and 83.7 % of total As were released into the aqueous phase in the low-, mid-, and high-sulfate treatments, respectively, indicating that the presence of large amounts of sulfate could enhance microbial arsenic mobilization in the As-Fe coprecipitate. In the low-sulfate treatment, As mobilization was primarily attributed to the reductive dissolution of the Fe (oxy)hydroxides and the As reduction and desorption. In the mid- and high-sulfate treatments, the reduction of arsenate and ferric iron was significantly enhanced. Complete ferric iron reduction was observed in the solid phase, implying that Fe (oxy)hydroxide was transformed to secondary minerals and may be the one of the primary causes for the enhanced As mobilization. Thermodynamic calculations predicted the formation of thioarsenite species after 35 days of incubation based on the concentration of dissolved As(III) and S(-II). Since thioarsenic species is more mobile, its formation may be one of the most important factors enhancing the As release in the high-sulfate system. The result of this study is of significance to completely predict the environmental behavior of As associated with Fe (hydr)oxides in the presence of microbial sulfidogenesis under anoxic conditions. PMID:26676545

  7. Assessment of microbial viability in municipal sludge following ultrasound and microwave pretreatments and resulting impacts on the efficiency of anaerobic sludge digestion.

    Science.gov (United States)

    Cella, Monica Angela; Akgul, Deniz; Eskicioglu, Cigdem

    2016-03-01

    A range of ultrasonication (US) and microwave irradiation (MW) sludge pretreatments were compared to determine the extent of cellular destruction in micro-organisms within secondary sludge and how this cellular destruction translated to anaerobic digestion (AD). Cellular lysis/inactivation was measured using two microbial viability assays, (1) Syto 16® Green and Sytox® Orange counter-assay to discern the integrity of cellular membranes and (2) a fluorescein diacetate assay to understand relative enzymatic activity. A range of MW intensities (2.17-6.48 kJ/g total solids or TS, coinciding temperatures of 60-160 °C) were selected for comparison via viability assays; a range of corresponding US intensities (2.37-27.71 kJ/g TS, coinciding sonication times of 10-60 min at different amplitudes) were also compared to this MW range. The MW pretreatment of thickened waste activated sludge (tWAS) caused fourfold to fivefold greater cell death than non-pretreated and US-pretreated tWAS. The greatest microbial destruction occurred at MW intensities greater than 2.62 kJ/g TS of sludge, after which increased energy input via MW did not appear to cause greater microbial death. In addition, the optimal MW pretreatment (80 °C, 2.62 kJ/g TS) and corresponding US pretreatment (10 min, 60 % amplitude, 2.37 kJ/g TS) were administered to the tWAS of a mixed sludge and fed to anaerobic digesters over sludge retention times (SRTs) of 20, 14, and 7 days to compare effects of feed pretreatment on AD efficiency. The digester utilizing MW-pretreated tWAS (80 °C, 2.62 kJ/g TS) had the greatest fecal coliform removal (73.4 and 69.8 % reduction, respectively), greatest solids removal (44.2 % TS reduction), and highest overall methane production (248.2 L CH4/kg volatile solids) at 14- and 7-day SRTs. However, despite the fourfold to fivefold increases in cell death upon pretreatment, improvements from the digester fed MW-pretreated sludge were marginal (i.e., increases in

  8. Ecogenomics of microbial communities in bioremediation of chlorinated contaminated sites

    OpenAIRE

    Maphosa, Farai; Lieten, Shakti H.; Dinkla, Inez; Stams, Alfons J.; Smidt, Hauke; Fennell, Donna E.

    2012-01-01

    Organohalide compounds such as chloroethenes, chloroethanes, and polychlorinated benzenes are among the most significant pollutants in the world. These compounds are often found in contamination plumes with other pollutants such as solvents, pesticides, and petroleum derivatives. Microbial bioremediation of contaminated sites, has become commonplace whereby key processes involved in bioremediation include anaerobic degradation and transformation of these organohalides by organohalide respirin...

  9. Ecogenomics of microbial communities in bioremediation of chlorinated contaminated sites

    OpenAIRE

    FaraiMaphosa; ShaktiHLieten; DonnaE.Fennell

    2012-01-01

    Organohalide compounds such as chloroethenes, chloroethanes and polychlorinated benzenes are among the most significant pollutants in the world. These compounds are often found in contamination plumes with other pollutants such as solvents, pesticides and petroleum derivatives. Microbial bioremediation of contaminated sites, has become commonplace whereby key processes involved in bioremediation include anaerobic degradation and transformation of these organohalides by organohalide respiring ...

  10. Strain-resolved microbial community proteomics reveals simultaneous aerobic and anaerobic function during gastrointestinal tract colonization of a preterm infant

    Directory of Open Access Journals (Sweden)

    Brandon eBrooks

    2015-07-01

    Full Text Available While there has been growing interest in the gut microbiome in recent years, it remains unclear whether closely related species and strains have similar or distinct functional roles and if organisms capable of both aerobic and anaerobic growth do so simultaneously. To investigate these questions, we implemented a high-throughput mass spectrometry-based proteomics approach to identify proteins in fecal samples collected on days of life 13-21 from an infant born at 28 weeks gestation. No prior studies have coupled strain-resolved community metagenomics to proteomics for such a purpose. Sequences were manually curated to resolve the genomes of two strains of Citrobacter that were present during the later stage of colonization. Proteome extracts from fecal samples were processed via a nano-2D-LC-MS/MS and peptides were identified based on information predicted from the genome sequences for the dominant organisms, Serratia and the two Citrobacter strains. These organisms are facultative anaerobes, and proteomic information indicates the utilization of both aerobic and anaerobic metabolisms throughout the time series. This may indicate growth in distinct niches within the gastrointestinal tract. We uncovered differences in the physiology of coexisting Citrobacter strains, including differences in motility and chemotaxis functions. Additionally, for both Citrobacter strains we resolved a community-essential role in vitamin metabolism and a predominant role in propionate production. Finally, in this case study we detected differences between genome abundance and activity levels for the dominant populations. This underlines the value in layering proteomic information over genetic potential.

  11. Evaluation of system performance and microbial communities of a bioaugmented anaerobic membrane bioreactor treating pharmaceutical wastewater.

    Science.gov (United States)

    Ng, Kok Kwang; Shi, Xueqing; Ng, How Yong

    2015-09-15

    In this study, a control anaerobic membrane bioreactor (C-AnMBR) and a bioaugmented anaerobic membrane bioreactor (B-AnMBR) were operated for 210 d to treat pharmaceutical wastewater. Both the bioreactors were fed with the pharmaceutical wastewater containing TCOD of 16,249 ± 714 mg/L and total dissolved solids (TDS) of 29,450 ± 2209 mg/L with an organic loading rate (OLR) of 13.0 ± 0.6 kgCOD/m(3)d. Under steady-state condition, an average total chemical oxygen demand (TCOD) removal efficiency of 46.1 ± 2.9% and 60.3 ± 2.8% was achieved by the C-AnMBR and the B-AnMBR, respectively. The conventional anaerobes in the C-AnMBR cannot tolerate the hypersaline conditions well, resulting in lower TCOD removal efficiency, biogas production and methane yield than the B-AnMBR seeded from the coastal shore. Pyrosequencing analysis indicated that marine bacterial species (Oliephilus sp.) and halophilic bacterial species (Thermohalobacter sp.) were only present in the B-AnMBR; these species could possibly degrade complex and recalcitrant organic matter and withstand hypersaline environments. Two different dominant archaeal communities, genus Methanosaeta (43.4%) and Methanolobus (61.7%), were identified as the dominant methanogens in the C-AnMBR and the B-AnMBR, respectively. The species of genus Methanolobus was reported resistant to penicillin and required sodium and magnesium for growth, which could enable it to thrive in the hypersaline environment. PMID:26086149

  12. [Achievement of Sulfate-Reducing Anaerobic Ammonium Oxidation Reactor Started with Nitrate-Reducting Anaerobic Ammonium Oxidation].

    Science.gov (United States)

    Liu, Zheng-chuan; Yuan, Lin-jiang; Zhou, Guo-biao; Li, Jing

    2015-09-01

    The transformation of nitrite-reducing anaerobic ammonium oxidation to sulfate-reducing anaerobic ammonium oxidation in an UASB was performed and the changes in microbial community were studied. The result showed that the sulfate reducing anaerobic ammonium oxidation process was successfully accomplished after 177 days' operation. The removal rate of ammonium nitrogen and sulfate were up to 58. 9% and 15. 7%, the removing load of ammonium nitrogen and sulfate were 74. 3 mg.(L.d)-1 and 77. 5 mg.(L.d)-1 while concentration of ammonium nitrogen and sulfate of influent were 130 mg.(L.d)-1 and 500 mg.(L.d)-1, respectively. The lost nitrogen and sulphur was around 2 in molar ratio. The pH value of the effluent was lower than that of the influent. Instead of Candidatus brocadia in nitrite reducing anaerobic ammonium oxidation granular sludge, Bacillus benzoevorans became the dominant species in sulfate reducing anaerobic ammonium oxidation sludge. The dominant bacterium in the two kinds of anaerobic ammonium oxidation process is different. Our results imply that the two anaerobic ammonium oxidation processes are carried out by different kind of bacterium. PMID:26717697

  13. Transformation of diphenylarsinic acid in agricultural soils.

    Science.gov (United States)

    Maejima, Yuji; Arao, Tomohito; Baba, Koji

    2011-01-01

    We investigated the transformation and fate of diphenylarsinic acid (DPAA) during incubation in two types of soils (Entisol and Andisol) under aerobic and anaerobic conditions. Under anaerobic conditions only, DPAA was transformed into methyldiphenylarsine oxide by methylation. Under both aerobic and anaerobic conditions, DPAA was degraded to phenylarsonic acid by dephenylation, and phenylarsonic acid was subsequently methylated to form methylphenylarsinic acid and dimethylphenylarsine oxide. The degradation of DPAA in the Andisol was less extensive than in the Entisol. In autoclaved soil under anaerobic conditions, DPAA underwent little degradation during the 24-wk incubation. In unautoclaved soils, the concentration of DPAA in soil clearly decreased after 24 wk of incubation, indicating that DPAA degradation was driven by microbial activity. PMID:21488495

  14. Cattle impact on soil microbial community composition, rates of microbial N&C transformations and related greenhouse gas emissions

    Czech Academy of Sciences Publication Activity Database

    Šimek, Miloslav; Hynšt, Jaroslav; Čuhel, Jiří; Elhottová, Dana; Chroňáková, Alica; Jirout, Jiří; Krištůfek, Václav

    Uppsala : Swedish University of Agricultural Sciences, 2009. s. 314. [BAGECO 10. Bacterial Genetics and Ecology - Coexisting on a Changing Planet. 15.06.2009-19.06.2009, Uppsala] Institutional research plan: CEZ:AV0Z60660521 Keywords : cattle * soil microbial community * greenhouse gas emissions Subject RIV: EH - Ecology, Behaviour

  15. Effects of digestate from anaerobically digested cattle slurry and plant materials on soil microbial community and emission of CO2 and N2O

    DEFF Research Database (Denmark)

    Johansen, Anders; Carter, Mette Sustmann; Jensen, Erik S.;

    2013-01-01

    Anaerobic digestion of animal manure and crop residues may be employed to produce biogas as a climate-neutral source of energy and to recycle plant nutrients as fertilizers. However, especially organic farmers are concerned that fertilizing with the digestates may impact the soil microbiota and......) anaerobically digested cattle slurry/grass-clover, or (5) fresh grass-clover was applied to soil at arable realistic rates. Experimental unites were sequentially sampled destructively after 1, 3 and 9 days of incubation and the soil assayed for content of mineral N, available organic C, emission of CO2 and N2O......, microbial phospholipid fatty acids (biomass and community composition) and catabolic response profiling (functional diversity). Fertilizing with the anaerobically digested materials increased the soil concentration of NO3− ca. 30–40% compared to when raw cattle slurry was applied. Grass-clover contributed...

  16. Constraints on mechanisms and rates of anaerobic oxidation of methane by microbial consortia: process-based modeling of ANME-2 archaea and sulfate reducing bacteria interactions

    Directory of Open Access Journals (Sweden)

    B. Orcutt

    2008-05-01

    Full Text Available Anaerobic oxidation of methane (AOM is the main process responsible for the removal of methane generated in Earth's marine subsurface environments. However, the biochemical mechanism of AOM remains elusive. By explicitly resolving the observed spatial arrangement of methanotrophic archaea and sulfate reducing bacteria found in consortia mediating AOM, potential intermediates involved in the electron transfer between the methane oxidizing and sulfate reducing partners were investigated via a consortium-scale reaction transport model that integrates the effect of diffusional transport with thermodynamic and kinetic controls on microbial activity. Model simulations were used to assess the impact of poorly constrained microbial characteristics such as minimum energy requirements to sustain metabolism, substrate affinity and cell specific rates. The role of environmental conditions such as the influence of methane levels on the feasibility of H2, formate and acetate as intermediate species, and the impact of the abundance of intermediate species on pathway reversal was examined. The results show that higher production rates of intermediates via AOM lead to increased diffusive fluxes from the methane oxidizing archaea to sulfate reducing bacteria, but the build-up of the exchangeable species causes the energy yield of AOM to drop below that required for ATP production. Comparison to data from laboratory experiments shows that under the experimental conditions of Nauhaus et al. (2007, neither hydrogen nor formate is exchanged fast enough between the consortia partners to achieve measured rates of metabolic activity, but that acetate exchange might support rates that approach those observed.

  17. A two-stage microbial fuel cell and anaerobic fluidized bed membrane bioreactor (MFC-AFMBR) system for effective domestic wastewater treatment.

    KAUST Repository

    Ren, Lijiao

    2014-03-10

    Microbial fuel cells (MFCs) are a promising technology for energy-efficient domestic wastewater treatment, but the effluent quality has typically not been sufficient for discharge without further treatment. A two-stage laboratory-scale combined treatment process, consisting of microbial fuel cells and an anaerobic fluidized bed membrane bioreactor (MFC-AFMBR), was examined here to produce high quality effluent with minimal energy demands. The combined system was operated continuously for 50 days at room temperature (∼25 °C) with domestic wastewater having a total chemical oxygen demand (tCOD) of 210 ± 11 mg/L. At a combined hydraulic retention time (HRT) for both processes of 9 h, the effluent tCOD was reduced to 16 ± 3 mg/L (92.5% removal), and there was nearly complete removal of total suspended solids (TSS; from 45 ± 10 mg/L to <1 mg/L). The AFMBR was operated at a constant high permeate flux of 16 L/m(2)/h over 50 days, without the need or use of any membrane cleaning or backwashing. Total electrical energy required for the operation of the MFC-AFMBR system was 0.0186 kWh/m(3), which was slightly less than the electrical energy produced by the MFCs (0.0197 kWh/m(3)). The energy in the methane produced in the AFMBR was comparatively negligible (0.005 kWh/m(3)). These results show that a combined MFC-AFMBR system could be used to effectively treat domestic primary effluent at ambient temperatures, producing high effluent quality with low energy requirements.

  18. Establishment and metabolic analysis of a model microbial community for understanding trophic and electron accepting interactions of subsurface anaerobic environments

    Directory of Open Access Journals (Sweden)

    Yang Zamin K

    2010-05-01

    Full Text Available Abstract Background Communities of microorganisms control the rates of key biogeochemical cycles, and are important for biotechnology, bioremediation, and industrial microbiological processes. For this reason, we constructed a model microbial community comprised of three species dependent on trophic interactions. The three species microbial community was comprised of Clostridium cellulolyticum, Desulfovibrio vulgaris Hildenborough, and Geobacter sulfurreducens and was grown under continuous culture conditions. Cellobiose served as the carbon and energy source for C. cellulolyticum, whereas D. vulgaris and G. sulfurreducens derived carbon and energy from the metabolic products of cellobiose fermentation and were provided with sulfate and fumarate respectively as electron acceptors. Results qPCR monitoring of the culture revealed C. cellulolyticum to be dominant as expected and confirmed the presence of D. vulgaris and G. sulfurreducens. Proposed metabolic modeling of carbon and electron flow of the three-species community indicated that the growth of C. cellulolyticum and D. vulgaris were electron donor limited whereas G. sulfurreducens was electron acceptor limited. Conclusions The results demonstrate that C. cellulolyticum, D. vulgaris, and G. sulfurreducens can be grown in coculture in a continuous culture system in which D. vulgaris and G. sulfurreducens are dependent upon the metabolic byproducts of C. cellulolyticum for nutrients. This represents a step towards developing a tractable model ecosystem comprised of members representing the functional groups of a trophic network.

  19. Efficient performance and the microbial community changes of submerged anaerobic membrane bioreactor in treatment of sewage containing cellulose suspended solid at 25°C.

    Science.gov (United States)

    Watanabe, Ryoya; Nie, Yulun; Takahashi, Shintaro; Wakahara, Shinichiro; Li, Yu-You

    2016-09-01

    Influence of cellulose as suspended solid (SS) on the performance of submerged anaerobic membrane bioreactor (SAnMBR) was evaluated at 25°C using two types of synthetic sewage (SS contained or not). During the 110days operation, COD and BOD removal, CH4 gas recovery and cellulose accumulation were investigated in detail. The influence of cellulose as SS in sewage on the SAnMBR performance was not significant at HRT longer than12h and 65-72% of the influent COD was recovered as methane gas at HRT of 12h. At HRT of 6h, the quality of effluent got worse and the accumulation of cellulose was found in reactor. 16S rRNA analysis revealed that the microbial diversity distribution including Archaea and Bacteria changed due to the addition of SS in sewage and specific microbe for cellulose degradation such as Proteobacteria was detected. Sludge in SAnMBR could acclimate to characteristics of sewage by self-adaptation. PMID:27235975

  20. Changes in microbial community during hydrogen and methane production in two-stage thermophilic anaerobic co-digestion process from biowaste.

    Science.gov (United States)

    Zahedi, S; Solera, R; Micolucci, F; Cavinato, C; Bolzonella, D

    2016-03-01

    In this paper, the microbial community in a two-phase thermophilic anaerobic co-digestion process was investigated for its role in hydrogen and methane production, treating waste activated sludge and treating the organic fraction of municipal solid waste. In the acidogenic phase, in which hydrogen is produced, Clostridium sp. clusters represented 76% of total Firmicutes. When feeding the acidogenic effluent into the methanogenic reactors, these acidic conditions negatively influenced methanogenic microorganisms: Methanosaeta sp., (Methanobacteriales, Methanomicrobiales, Methanococcales) decreased by 75%, 50%, 38% and 52%, respectively. At the same time, methanogenic digestion lowered the numbers of Clostridium sp. clusters due to both pH increasing and substrate reduction, and an increase in both Firmicutes genera (non Clostridium) and methanogenic microorganisms, especially Methanosaeta sp. (208%). This was in accordance with the observed decrease in acetic (98%) and butyric (100%) acid contents. To ensure the activity of the acetate-utilizing methanogens (AUM) and the acetogens, high ratios of H2-utilizing methanogens (HUM)/AUM (3.6) were required. PMID:26810032

  1. Performance and microbial community dynamics in a two-phase anaerobic co-digestion system using cassava dregs and pig manure.

    Science.gov (United States)

    Ren, Jiwei; Yuan, Xufeng; Li, Jie; Ma, Xuguang; Zhao, Ye; Zhu, Wanbing; Wang, Xiaofen; Cui, Zongjun

    2014-03-01

    The two-phase anaerobic co-digestion of cassava dregs (CD) with pig manure (PM) was evaluated using four sequencing batch reactors (SBRs) and a continuously stirred tank reactor (CSTR). The effect of seven different PM to CD volatile solid ratios (10:0, 8:2, 6:4, 5:5, 4:6, 2:8 and 0:10) on the acidification phase was investigated. Results indicated the concentrations of soluble chemical oxygen demand, NH4-N and volatile fatty acids increased substantially at seven ratios. Co-acidification of PM and CD performed well. Methanogenic fermentation of the acidification products at seven ratios was steady in CSTR. The highest methane yield and VS removal of 0.352m(3)/kg VSadded and 68.5% were achieved at PM:CD (4:6). The microbial population in CSTR was analyzed using molecular methods. Findings revealed that bacteria such as Firmicutes and Bacteroidetes, archaea such as Methanobacteriales and Methanomicrobiales were advantageous populations. Co-digestion of PM and CD supported higher quantity and diversity of methanogens. PMID:24463413

  2. A performance study of simultaneous microbial removal of no and SO2 in a biotrickling-filter under anaerobic condition

    Directory of Open Access Journals (Sweden)

    Yaqiong Han

    2011-06-01

    Full Text Available The behaviors of simultaneous removal of NO and SO2 using the coculture of anaerobic denitrifying bacteria and sulfate reducing bacteria was investigated in a bench-scale biotrickling-filter. When the combined NO/SO2 removal biotrickling-filter was operated at an empty bed residence time of 76 s with NO and SO2 feed concentrations of 2 and 2 g/m3, respectively, the SO2 removal efficiency was always above 95%, while NO removal exhibited an evident periodicity of 5-6 days for the initial 60 days after the attachment phase. A steady-state NO-removal efficiency of around 90% was obtained after 130 days of continuous operation. Experimental results indicated that the coculture in the combined NO/SO2 removal biotrickling-filter showed a higher resistance to shock NO-loadings and a better tolerance to starvation than the single denitrifying bacteria in the NO removal biotrickling-filter.

  3. Start-up of an anaerobic dynamic membrane digester for waste activated sludge digestion: temporal variations in microbial communities.

    Directory of Open Access Journals (Sweden)

    Hongguang Yu

    Full Text Available An anaerobic dynamic membrane digester (ADMD was developed to digest waste sludge, and pyrosequencing was used to analyze the variations of the bacterial and archaeal communities during the start-up. Results showed that bacterial community richness decreased and then increased over time, while bacterial diversity remained almost the same during the start-up. Proteobacteria and Bacteroidetes were the major phyla. At the class level, Betaproteobacteria was the most abundant at the end of start-up, followed by Sphingobacteria. In the archaeal community, richness and diversity peaked at the end of the start-up stage. Principle component and cluster analyses demonstrated that archaeal consortia experienced a distinct shift and became stable after day 38. Methanomicrobiales and Methanosarcinales were the two predominant orders. Further investigations indicated that Methanolinea and Methanosaeta were responsible for methane production in the ADMD system. Hydrogenotrophic pathways might prevail over acetoclastic means for methanogenesis during the start-up, supported by specific methanogenic activity tests.

  4. Anaerobic thermophilic bacteria isolated from a Venezuelan oil field and its potential use in microbial improved oil recovery

    Energy Technology Data Exchange (ETDEWEB)

    Trebbau, G.; Fernandez, B.; Marin, A. [INTEVEP S.A., Caracas (Venezuela)

    1995-12-31

    The objective of this work is to determine the ability of indigenous bacteria from a Venezuelan oil field to grow under reservoir conditions inside a porous media, and to produce metabolites capable of recovering residual crude oil. For this purpose, samples of formation waters from a central-eastern Venezuelan oil reservoir were enriched with different carbon sources and a mineral basal media. Formation water was used as a source of trace metals. The enrichments obtained were incubated at reservoir temperature (71{degrees}C), reservoir pressure (1,200 psi), and under anaerobic conditions for both outside and inside porous media (Berea core). Growth and metabolic activity was followed outside porous media by measuring absorbance at 660 nm, increases in pressure, and decreases in pH. Inside porous media bacterial activity was determined by visual examination of the produced waters (gas bubbles and bacterial cells). All the carbohydrates tested outside porous media showed good growth at reservoir conditions. The pH was lowered, gases such as CO{sub 2} and CH{sub 4} were identified by GC. Surface tension was lowered in some enrichments by 30% when compared to controls. Growth was decreased inside porous media, but gases were produced and helped displace oil. In addition, 10% residual oil was recovered from the Berea core. Mathematical modeling was applied to the laboratory coreflood experiment to evaluate the reproducibility of the results obtained.

  5. Anaerobic digestion of manure and mixture of manure with lipids: biogas reactor performance and microbial community analysis

    DEFF Research Database (Denmark)

    Mladenovska, Zuzana; Dabrowski, Slawomir; Ahring, Birgitte Kiær

    2003-01-01

    and lipids. Spatial microbial distribution and activity was studied in digested materials fractionated into size of particles > 200 mum, 50-200 mum and 0.45-50 mum. With manure, the main pool of methanogenic activity from propionate, butyrate and hydrogen was associated with the particles > 200 mum......, while the activity of acetotrophic methanogens was uniformly distributed in all fractions. When digesting manure and lipids, an enhanced methanogenesis was detected both for particles > 200 mum and the 50-200 mum fraction. The molecular methods -temperature gradient gel electrophoresis (TGGE), cloning...... library and sequencing of 16S rDNA - showed presence of a restricted number of archaeal species in both reactors. The vast majority of clones was phylogenetically most closely related to Methanosarcina siciliae....

  6. Intermittent vs continuous operation of upflow anaerobic sludge bed reactors for dairy wastewater and related microbial changes.

    Science.gov (United States)

    Nadais, H; Capela, I; Arroja, L

    2006-01-01

    This work compares continuous vs intermittent UASB reactors inoculated with flocculent sludge for the treatment of dairy effluents. The effects of effluent recirculation on the performance of intermittent reactors were assessed as well as the differences in specific methanogenic activity (SMA) with different substrates for the biomass from continuous and intermittent UASB reactors. Compared to the continuous operation the intermittent operation resulted in higher methanization of the removed COD (64-78% and 65-88%, respectively) whilst the effluent recirculation presented beneficial effects when applied during the stabilization period and was clearly detrimental when applied during the feed period of the intermittent operation. The SMA tests showed that the intermittent operation causes a shift in the microbial populations towards a better adaptation for the degradation of complex substrates confirmed by the meaningfull contribution of methane production through a pathway other than acetoclastic methanogenesis observed in the biomass taken from intermittent UASB reactors. PMID:16939090

  7. Alterations in soil microbial activity and N-transformation processes due to sulfadiazine loads in pig-manure

    International Nuclear Information System (INIS)

    Most veterinary drugs enter the environment via manure application. However, it is unclear how these substances interact with soil biota. Therefore, it was the aim of the present study to investigate the effects of manure containing different concentrations of the antibiotic sulfadiazine (SDZ) on the soil microbial communities. It was shown that manure alone has a stimulating effect on microbial activity. Only potential nitrification was negatively influenced by manure application. The addition of SDZ to the manure reduced microbial activity. Depending on the SDZ concentration, levels of activity were in the range of the control soil without manure application. Also, selected processes in nitrogen turnover were negatively influenced by the addition of SDZ to the manure, with nitrification being the only exception. The effects were visible for up to 4 days after application of the manure with or without SDZ and were correlated with the bioavailability of the antibiotic. - This study gives first insights into the effects of manure containing the antibiotic sulfadiazine on microbial activity and nitrogen transformation potentials in soil

  8. Alterations in soil microbial activity and N-transformation processes due to sulfadiazine loads in pig-manure

    Energy Technology Data Exchange (ETDEWEB)

    Kotzerke, Anja [Berlin University of Technology, Institute of Ecology, Franklinstrasse 29, 10587 Berlin (Germany)], E-mail: anja.kotzerke@tu-berlin.de; Sharma, Shilpi [GSF-National Research Center for Environment and Health, Institute of Soil Ecology, Ingolstaedter Landstrasse 1, 85764 Neuherberg (Germany)], E-mail: shilpi.sharma@gsf.de; Schauss, Kristina [GSF-National Research Center for Environment and Health, Institute of Soil Ecology, Ingolstaedter Landstrasse 1, 85764 Neuherberg (Germany)], E-mail: kristina.schauss@gsf.de; Heuer, Holger [Federal Biological Research Centre for Agriculture and Forestry (BBA), Messeweg 11-12, 38104 Braunschweig (Germany)], E-mail: h.heuer@bba.de; Thiele-Bruhn, Soeren [Trier University, Soil Science, Behringstrasse 21, 54286 Trier (Germany)], E-mail: thiele@uni-trier.de; Smalla, Kornelia [Federal Biological Research Centre for Agriculture and Forestry (BBA), Messeweg 11-12, 38104 Braunschweig (Germany)], E-mail: k.smalla@bba.de; Wilke, Berndt-Michael [Berlin University of Technology, Institute of Ecology, Franklinstrasse 29, 10587 Berlin (Germany)], E-mail: bmwilke@tu-berlin.de; Schloter, Michael [GSF-National Research Center for Environment and Health, Institute of Soil Ecology, Ingolstaedter Landstrasse 1, 85764 Neuherberg (Germany)], E-mail: michael.schloter@gsf.de

    2008-05-15

    Most veterinary drugs enter the environment via manure application. However, it is unclear how these substances interact with soil biota. Therefore, it was the aim of the present study to investigate the effects of manure containing different concentrations of the antibiotic sulfadiazine (SDZ) on the soil microbial communities. It was shown that manure alone has a stimulating effect on microbial activity. Only potential nitrification was negatively influenced by manure application. The addition of SDZ to the manure reduced microbial activity. Depending on the SDZ concentration, levels of activity were in the range of the control soil without manure application. Also, selected processes in nitrogen turnover were negatively influenced by the addition of SDZ to the manure, with nitrification being the only exception. The effects were visible for up to 4 days after application of the manure with or without SDZ and were correlated with the bioavailability of the antibiotic. - This study gives first insights into the effects of manure containing the antibiotic sulfadiazine on microbial activity and nitrogen transformation potentials in soil.

  9. Soil microbial respiration (CO2) of natural and anthropogenically-transformed ecosystems in Moscow region, Russia

    Science.gov (United States)

    Ivashchenko, Kristina; Ananyeva, Nadezhda; Rogovaya, Sofia; Vasenev, Viacheslav

    2016-04-01

    The CO2 concentration in modern atmosphere is increasing and one of the most reasons of it is land use changing. It is related not only with soil plowing, but also with growing urbanization and, thereby, forming the urban ecosystems. Such conversion of soil cover might be affected by efflux CO2 from soil into atmosphere. The soil CO2 efflux mainly supplies by soil microorganisms respiration (contribution around 70-90%) and plant roots respiration. Soil microbial respiration (MR) is determined in the field (in situ) and laboratory (in vitro) conditions. The measurement of soil MR in situ is labour-consuming, and for district, region and country areas it is difficult carried. We suggest to define the MR of the upper highest active 10 cm mineral soil layer (in vitro) followed by the accounting of area for different ecosystems in large region of Russia. Soils were sampled (autumn, 2011) in natural (forest, meadow) and anthropogenically-transformed (arable, urban) ecosystems of Sergiev-Posad, Taldom, Voskresenk, Shatura, Serpukhov and Serbryanye Prudy districts in Moscow region. In soil samples (total 156) the soil MR (24 h, 22°C, 60% WHC) were measured after preincubation procedure (7 d., 22°C, 55% WHC). The soil MR ranged from 0.13 (urban) to 5.41 μg CO2-C g-1 h-1 (meadow), the difference between these values was 42 times. Then, the soil MR values (per unit soil weight) were calculated per unit soil area (1 m2), the layer thickness of which was 0.1 m (soil volume weight was equaled 1 g cm-3). The high MR values were noted for forests soil (832-1410 g CO2-C m-2 yr-1) of studied districts, and the low MR values were for arable and urban soils (by 1.6-3.2 and 1.3-2.7 times less compared to forests, respectively). The MR rate of urban soil in Voskresenk district was comparable to that of corresponding meadows and it was even higher (in average by 2.3 times) in Serpukhov district. The soil MR rate of studied cities was higher by 20%, than in corresponding arable soils

  10. Microbial Transformations of TRU and Mixed Wastes: Actinide Speciation and Waste Volume Reduction

    International Nuclear Information System (INIS)

    Work has been performed in 2 areas; reduction of uranium by bacteria and the characterization of cellulose degraded by bacteria. Uranium reduction study utilized Shewanella oneidensis, a widely distributed species of bacteria known to utilize several elements such as iron, manganese and sulfur as electron acceptors. Shewanella oneidensis was grown aerobically approximately 24hrs at room temp in Tryptic Soy Broth (TSB). Cells are then concentrated by centrifugation and washed thoroughly with NaHCO3 (2.5g/L) buffer. A small sub-sample of cells are stained with DAPI and counted under a microscope for accurate determination of cellnumber. Cells are then diluted in NaHCO3 to the appropriate concentration of 2*108 cells/mL. No cells were added as a control. A 5mL solution of cells is then transferred into 100mL of sterile anaerobic bicarbonate buffered freshwater medium with the phosphate removed and 5mM lactate as the carbon source. At several time points 3 1mL samples are removed from each of the batch experiments and the control into 1.5mL eppendorf tubes containing 0.1mL formaldehyde. Samples are then removed from the anaerobic environment and frozen until analysis. Individual samples are filtered (0.2 micron pore size) to remove any uraninite and cellular material and diluted with 4mL 0.1M HNO3. Concentration of uranyl present in each sample was measured using UV-Visible spectroscopy. Data are fit to a first order model as follows: [U]t=[U]oe-kt + [U]eq where [U]o is the initial uranyl solution concentration, [U]t is the uranyl solution concentration at time t, and [U]eq is the uranyl concentration remaining in solution at equilibrium. Use of the first order fit was based on previous studies and publications. Reduction of U(VI) to U(IV) was evident by a reduction in the uranyl present in the media over time and the accumulation of a brown-black precipitate determined from previous experiments to be uraninite by XRD. Results showed that the reduction reaction occurs

  11. Determination and Visualization of pH Values in Anaerobic Digestion of Water Hyacinth and Rice Straw Mixtures Using Hyperspectral Imaging with Wavelet Transform Denoising and Variable Selection

    Directory of Open Access Journals (Sweden)

    Chu Zhang

    2016-02-01

    Full Text Available Biomass energy represents a huge supplement for meeting current energy demands. A hyperspectral imaging system covering the spectral range of 874–1734 nm was used to determine the pH value of anaerobic digestion liquid produced by water hyacinth and rice straw mixtures used for methane production. Wavelet transform (WT was used to reduce noises of the spectral data. Successive projections algorithm (SPA, random frog (RF and variable importance in projection (VIP were used to select 8, 15 and 20 optimal wavelengths for the pH value prediction, respectively. Partial least squares (PLS and a back propagation neural network (BPNN were used to build the calibration models on the full spectra and the optimal wavelengths. As a result, BPNN models performed better than the corresponding PLS models, and SPA-BPNN model gave the best performance with a correlation coefficient of prediction (rp of 0.911 and root mean square error of prediction (RMSEP of 0.0516. The results indicated the feasibility of using hyperspectral imaging to determine pH values during anaerobic digestion. Furthermore, a distribution map of the pH values was achieved by applying the SPA-BPNN model. The results in this study would help to develop an on-line monitoring system for biomass energy producing process by hyperspectral imaging.

  12. Determination and Visualization of pH Values in Anaerobic Digestion of Water Hyacinth and Rice Straw Mixtures Using Hyperspectral Imaging with Wavelet Transform Denoising and Variable Selection.

    Science.gov (United States)

    Zhang, Chu; Ye, Hui; Liu, Fei; He, Yong; Kong, Wenwen; Sheng, Kuichuan

    2016-01-01

    Biomass energy represents a huge supplement for meeting current energy demands. A hyperspectral imaging system covering the spectral range of 874-1734 nm was used to determine the pH value of anaerobic digestion liquid produced by water hyacinth and rice straw mixtures used for methane production. Wavelet transform (WT) was used to reduce noises of the spectral data. Successive projections algorithm (SPA), random frog (RF) and variable importance in projection (VIP) were used to select 8, 15 and 20 optimal wavelengths for the pH value prediction, respectively. Partial least squares (PLS) and a back propagation neural network (BPNN) were used to build the calibration models on the full spectra and the optimal wavelengths. As a result, BPNN models performed better than the corresponding PLS models, and SPA-BPNN model gave the best performance with a correlation coefficient of prediction (rp) of 0.911 and root mean square error of prediction (RMSEP) of 0.0516. The results indicated the feasibility of using hyperspectral imaging to determine pH values during anaerobic digestion. Furthermore, a distribution map of the pH values was achieved by applying the SPA-BPNN model. The results in this study would help to develop an on-line monitoring system for biomass energy producing process by hyperspectral imaging. PMID:26901202

  13. Microbial iron reduction influenced by humic acids and redox transformation of arsenic by reactive iron minerals

    OpenAIRE

    Amstätter, Katja

    2009-01-01

    The work presented in this thesis showed concentration-dependent aggregate formation of 2 line ferrihydrite. Determination of microbial iron reduction rates of Shewanella oneidensis MR 1 in these setups showed limited microbial accessibility of the aggregates depending on the mineral concentration. In addition, the accessibility of the mineral aggregates varied in the presence of different concentrations of humic acids. Adsorbed humic acids changed the surface charge of the mineral aggregates...

  14. Initial Test of the Benchmark Chemical Approach for Predicting Microbial Transformation Rates in Aquatic Environments

    OpenAIRE

    Newton, Thomas D.; Gattie, David K.; Lewis, David L

    1990-01-01

    Using 2,4-dichlorophenoxyacetic acid methyl ester (2,4-DME) as a benchmark chemical, we determined relative pseudo-first-order rate coefficients for the butoxyethyl ester of 2,4-dichlorophenoxyacetic acid (2,4-DBE), methyl parathion, and methyl-3-chlorobenzoate in a diversity of microbial samples, including water, sediment, biofilm, and floating microbial mats collected from a laboratory mesocosm as well as from streams, lakes, and wetlands in Georgia and Florida. The decreasing order of reac...

  15. Impacts of Pristine and Transformed Ag and Cu Engineered Nanomaterials on Surficial Sediment Microbial Communities Appear Short-Lived.

    Science.gov (United States)

    Moore, Joe D; Stegemeier, John P; Bibby, Kyle; Marinakos, Stella M; Lowry, Gregory V; Gregory, Kelvin B

    2016-03-01

    Laboratory-based studies have shown that many soluble metal and metal oxide engineered nanomaterials (ENM) exert strong toxic effects on microorganisms. However, laboratory-based studies lack the complexity of natural systems and often use "as manufactured" ENMs rather than more environmentally relevant transformed ENMs, leaving open the question of whether natural ligands and seasonal variation will mitigate ENM impacts. Because ENMs will accumulate in subaquatic sediments, we examined the effects of pristine and transformed Ag and Cu ENMs on surficial sediment microbial communities in simulated freshwater wetlands. Five identical mesocosms were dosed through the water column with either Ag(0), Ag2S, CuO or CuS ENMs (nominal sizes of 4.67 ± 1.4, 18.1 ± 3.2, 31.1 ± 12, and 12.4 ± 4.1, respectively) or Cu(2+). Microbial communities were examined at 0, 7, 30, 90, 180, and 300 d using qPCR and high-throughput 16S rRNA gene sequencing. Results suggest differential short-term impacts of Ag(0) and Ag2S, similarities between CuO and CuS, and differences between Cu ENMs and Cu(2+). PICRUSt-predicted metagenomes displayed differential effects of Ag treatments on photosynthesis and of Cu treatments on methane metabolism. By 300 d, all metrics pointed to reconvergence of ENM-dosed mesocosm microbial community structure and composition, suggesting that the long-term microbial community impacts from a pulse of Ag or Cu ENMs are limited. PMID:26841726

  16. Microbial Communities and Their Performances in Anaerobic Hybrid Sludge Bed-Fixed Film Reactor for Treatment of Palm Oil Mill Effluent under Various Organic Pollutant Concentrations

    Directory of Open Access Journals (Sweden)

    Kanlayanee Meesap

    2012-01-01

    Full Text Available The anaerobic hybrid reactor consisting of sludge and packed zones was operated with organic pollutant loading rates from 6.2 to 8.2 g COD/L day, composed mainly of suspended solids (SS and oil and grease (O&G concentrations between 5.2 to 10.2 and 0.9 to 1.9 g/L, respectively. The overall process performance in terms of chemical oxygen demands (COD, SS, and O&G removals was 73, 63, and 56%, respectively. When the organic pollutant concentrations were increased, the resultant methane potentials were higher, and the methane yield increased to 0.30 L CH4/g CODremoved. It was observed these effects on the microbial population and activity in the sludge and packed zones. The eubacterial population and activity in the sludge zone increased to 6.4 × 109 copies rDNA/g VSS and 1.65 g COD/g VSS day, respectively, whereas those in the packed zone were lower. The predominant hydrolytic and fermentative bacteria were Pseudomonas, Clostridium, and Bacteroidetes. In addition, the archaeal population and activity in the packed zone were increased from to 9.1 × 107 copies rDNA/g VSS and 0.34 g COD-CH4/g VSS day, respectively, whereas those in the sludge zone were not much changed. The most represented species of methanogens were the acetoclastic Methanosaeta, the hydrogenotrophic Methanobacterium sp., and the hydrogenotrophic Methanomicrobiaceae.

  17. Anaerobic thermophiles.

    Science.gov (United States)

    Canganella, Francesco; Wiegel, Juergen

    2014-01-01

    The term "extremophile" was introduced to describe any organism capable of living and growing under extreme conditions. With the further development of studies on microbial ecology and taxonomy, a variety of "extreme" environments have been found and an increasing number of extremophiles are being described. Extremophiles have also been investigated as far as regarding the search for life on other planets and even evaluating the hypothesis that life on Earth originally came from space. The first extreme environments to be largely investigated were those characterized by elevated temperatures. The naturally "hot environments" on Earth range from solar heated surface soils and water with temperatures up to 65 °C, subterranean sites such as oil reserves and terrestrial geothermal with temperatures ranging from slightly above ambient to above 100 °C, to submarine hydrothermal systems with temperatures exceeding 300 °C. There are also human-made environments with elevated temperatures such as compost piles, slag heaps, industrial processes and water heaters. Thermophilic anaerobic microorganisms have been known for a long time, but scientists have often resisted the belief that some organisms do not only survive at high temperatures, but actually thrive under those hot conditions. They are perhaps one of the most interesting varieties of extremophilic organisms. These microorganisms can thrive at temperatures over 50 °C and, based on their optimal temperature, anaerobic thermophiles can be subdivided into three main groups: thermophiles with an optimal temperature between 50 °C and 64 °C and a maximum at 70 °C, extreme thermophiles with an optimal temperature between 65 °C and 80 °C, and finally hyperthermophiles with an optimal temperature above 80 °C and a maximum above 90 °C. The finding of novel extremely thermophilic and hyperthermophilic anaerobic bacteria in recent years, and the fact that a large fraction of them belong to the Archaea has definitely

  18. Anaerobic Thermophiles

    Directory of Open Access Journals (Sweden)

    Francesco Canganella

    2014-02-01

    Full Text Available The term “extremophile” was introduced to describe any organism capable of living and growing under extreme conditions. With the further development of studies on microbial ecology and taxonomy, a variety of “extreme” environments have been found and an increasing number of extremophiles are being described. Extremophiles have also been investigated as far as regarding the search for life on other planets and even evaluating the hypothesis that life on Earth originally came from space. The first extreme environments to be largely investigated were those characterized by elevated temperatures. The naturally “hot environments” on Earth range from solar heated surface soils and water with temperatures up to 65 °C, subterranean sites such as oil reserves and terrestrial geothermal with temperatures ranging from slightly above ambient to above 100 °C, to submarine hydrothermal systems with temperatures exceeding 300 °C. There are also human-made environments with elevated temperatures such as compost piles, slag heaps, industrial processes and water heaters. Thermophilic anaerobic microorganisms have been known for a long time, but scientists have often resisted the belief that some organisms do not only survive at high temperatures, but actually thrive under those hot conditions. They are perhaps one of the most interesting varieties of extremophilic organisms. These microorganisms can thrive at temperatures over 50 °C and, based on their optimal temperature, anaerobic thermophiles can be subdivided into three main groups: thermophiles with an optimal temperature between 50 °C and 64 °C and a maximum at 70 °C, extreme thermophiles with an optimal temperature between 65 °C and 80 °C, and finally hyperthermophiles with an optimal temperature above 80 °C and a maximum above 90 °C. The finding of novel extremely thermophilic and hyperthermophilic anaerobic bacteria in recent years, and the fact that a large fraction of them belong

  19. Microbial metabolism fuels ecosystem-scale organic matter transformations: an integrated biological and chemical perspective

    Science.gov (United States)

    Wrighton, K. C.; Narrowe, A. B.; Angle, J.; Stefanik, K. S.; Daly, R. A.; Johnston, M.; Miller, C. S.

    2014-12-01

    Freshwater saturated sediments and soils represent vital ecosystems due to their nutrient cycling capacities and their prominent contribution to global greenhouse gas emissions. However, the diversity of microorganisms and metabolic pathways involved in carbon cycling, and the impacts of these processes on other biogeochemical cycles remain poorly understood. Major advances in DNA sequencing have helped forge linkages between the previously disconnected biological and chemical components of these systems. Here, we present data on the use of assembly-based metagenomics to generate hypotheses on microbial carbon degradation and biogeochemical cycling in waterlogged sediments and soils. DNA sequencing from a fresh water aquifer adjacent to the Colorado River in Rifle, CO yielded extensive genome recovery from multiple previously unknown bacterial lineages. Fermentative metabolisms encoded by these genomes drive nitrogen, hydrogen, and sulfur cycling in this subsurface system. We are also applying a similar approach to identify microbial processes in a freshwater wetland on Lake Erie, OH. Given the increased diversity (increased richness, decreased evenness, and strain variation) of wetland sediment microbial communities, we modified methods for specialized assembly of long taxonomic marker gene amplicons (EMIRGE) to create a biogeographical map of Fungi, Archaea, and Bacteria along depth and hydrological transects. This map reveals that the microbial community associated with the top two depths (>7 cm) is significantly different from bottom depths (7-40 cm). Dissolved organic matter (DOM) molecular weight and the presence of oxidized terminal electron acceptors best predict differences in microbial community structure. Laboratory mesocosms amended with pore-water DOM, in situ soil communities, and variable oxygen conditions link DOM composition and redox to microbial metabolic networks, biogeochemical cycles, and green house gas emission. Organism identities from

  20. Microbial transformations of steroids--V. Transformation of progesterone by whole cells and extracts of Botryosphaerica obtusa.

    Science.gov (United States)

    Smith, K E; Latif, S; Kirk, D N

    1989-11-01

    Members of the genus Botryosphaerica are reported 7 alpha steroid hydroxylators [1]. We found that the species B. obtusa efficiently hydroxylated progesterone in a 1-day transformation but it gave 7 beta-hydroxyprogesterone as the main product rather than the expected 7 alpha-hydroxy isomer, which was produced in only trace amounts. Also formed in minor amounts were 6 beta-, possibly 9 alpha- (see main text), 14 alpha- and 15 beta-monohydroxyprogesterones. The transformation mixtures included appreciable amounts of dihydroxylated progesterones which were mainly based on 7 beta-hydroxyprogesterone. The second hydroxyl group was at one of the minor monohydroxylation sites. The relative concentrations of the progesterone diols increased and those of the mono-alcohols concomitantly decreased when transformation was extended beyond 1 day. Monohydroxylated 6-dehydroprogesterones began to accumulate after about 3 days and these compounds seemed to have been formed by 6,7-dehydration of the dihydroxyprogesterones. We prepared mycelial cell-free extracts which were capable of transforming progesterone and retained the site-specificity of whole cells. These extracts converted 7 beta-hydroxyprogesterone to its 6-dehydro derivative, confirming that ring B desaturation occurs in this organism by dehydration. The dehydratase activity necessary for the conversion was separable from the hydroxylase activity by ultra-centrifugation. All hydroxylase activity co-sedimented with the membrane fraction, implying that steroid hydroxylation is effected by a membrane-bound enzyme(s). Dehydratase activity was present in both the pellet and the supernatant fractions, which suggests that it may involve a loosely bound, and easily removed, membrane-associated enzyme. PMID:2601338

  1. Dynamics of the microbial community and Fe(III)-reducing and dechlorinating microorganisms in response to pentachlorophenol transformation in paddy soil.

    Science.gov (United States)

    Chen, Manjia; Liu, Chengshuai; Chen, Pengcheng; Tong, Hui; Li, Fangbai; Qiao, Jiangtao; Lan, Qing

    2016-07-15

    Soil microorganisms play crucial roles in the fates of pollutants, and understanding the behaviour of these microorganisms is critical for the bioremediation of PCP-contaminated soil. However, shifts remain unclear in the community structure and Fe(III)-reducing and dechlorinating microorganisms during PCP transformation processes, especially during the stages from the lag to the dechlorination phase and from the dechlorination to the stationary phase. Here, a set of lab-scale experiments was performed to investigate the microbial community dynamics accompanying PCP transformation in paddy soil. 19μM of PCP was biotransformed completely in 10days for all treatments. T-RFLP analysis of the microbial community confirmed that Veillonellaceae and Clostridium sensu stricto were the dominant groups during PCP transformation, and the structures of the microbial communities changed due to the degree of biotransformation and the addition of lactate and AQDS. However, similar temporal dynamics of the microbial communities were obtained among all treatments. Furthermore, as revealed by quantitative PCR, the dynamics of Fe(III)-reducing and dechlorinating microorganisms, including Geobacter sp., Shewanella sp., and Dehalobacter sp., were consistent with the transformation kinetics of PCP, suggesting the critical roles played by these microorganisms in PCP transformation. These findings are valuable for making predictions of and proposing methods for the microbial detoxification of residual organochlorine pesticides in paddy soil. PMID:27017395

  2. Effects of cattle grazing, trampling and excrement deposition on microbial nitrogen transformations in upland soil

    Czech Academy of Sciences Publication Activity Database

    Šimek, Miloslav; Čuhel, Jiří

    Badajos : Formatex Center, 2007. s. 20. [BioMicroWorld - 2007. Fostering Cross-disciplinary Applied Research in Microbiology and Microbial Biotechnology. International Conference on Environmental, Industrial and Applied Microbiology /2./. 28.11.2007-01.12.2007, Seville] Institutional research plan: CEZ:AV0Z60660521 Keywords : nitrogen * denitrification * enzyme activity Subject RIV: EH - Ecology, Behaviour

  3. Microbial transformations of steroids--IV. 6,7-Dehydrogenation; a new class of fungal steroid transformation product.

    Science.gov (United States)

    Smith, K E; Latif, S; Kirk, D N; White, K A

    1989-08-01

    Microbial steroid dehydrogenation is quite common. The reaction seems to occur mainly in bacteria and usually results in hydrogen abstraction from positions C(1)-C(2) and/or C(4)-C(5) with occasional aromatisation of ring A. We have screened large numbers of fungal cultures for their ability to monohydroxylate steroids at unusual sites and in the course of our investigations we have identified seven fungal strains capable of dehydrogenating ring B of progesterone and androstenedione at positions C(6)-C(7). Microbiological dehydrogenation at this site seems not to have been reported previously. The structures of the metabolites isolated from progesterone, and the producing fungi, are: 6-dehydroprogesterone (Botryodiplodia theobromae), 11 alpha-hydroxy-6-dehydroprogesterone (Botryosphaerica obtusa, Mucor racemosus and Nigrospora sphaerica), 12 alpha-, 15 beta- and 16 alpha-hydroxy-6-dehydroprogesterones (B. obtusa) and 14 alpha-hydroxy-6-dehydroprogesterone (Apiocrea chrysosperma) [1]. From androstenedione we isolated 6-dehydroandrostenedione (Absidia coerulea and Curvularia lunata) and 6-dehydrotestosterone (C. lunata). PMID:2770300

  4. The Technology and Economy of Farm-Scale, High-Solids Anaerobic Digestion of Plant Biomass

    OpenAIRE

    Svensson, Mattias

    2005-01-01

    Anaerobic digestion is a microbially mediated process occurring in nature in the absence of oxygen and other non-carbonaceous electron acceptors. The majority of the carbon of the organic matter degraded in the process is transformed into carbon dioxide and methane. Most of the energy potential of the degraded material is conserved in the methane, thus providing a renewable energy carrier, which can be converted into heat and/or electricity, or upgraded for use as a vehicle fuel. The remainin...

  5. Microbially-mediated fluorescent organic matter transformations in the deep ocean. Do the chemical precursors matter?

    Directory of Open Access Journals (Sweden)

    Fran L. Aparicio

    2015-12-01

    Full Text Available The refractory nature of marine dissolved organic matter (DOM increases while it travels from surface waters to the deep ocean. This resistant fraction is in part composed of fluorescent humic-like material, which is relatively difficult to metabolize by deep water prokaryotes, and it can also be generated by microbial activity. It has been recently argued that microbial production of new fluorescent DOM (FDOM requires the presence of humic precursors in the surrounding environment. In order to experimentally test how the chemical quality of the available organic compounds influences the production of new FDOM, three experiments were performed with bathypelagic Atlantic waters. Microbial communities were incubated in three treatments which differed in the quality of the organic compounds added: i glucose and acetate; ii glucose, acetate, essential amino acids and humic acids; and iii humic acids alone. The response of the prokaryotes and the production of FDOM were simultaneously monitored. Prokaryotic abundance was highest in treatments where labile compounds were added. The rate of humic-like fluorescence production scaled to prokaryotic abundance varied depending on the quality of the additions. The precursor compounds affected the generation of new humic-like FDOM, and the cell-specific production of this material was higher in the incubations amended with humic precursors. Furthermore, we observed that the protein-like fluorescence decreased only when fresh amino acids were added. These findings contribute to the understanding of FDOM variability in deep waters and provide valuable information for studies where fluorescent compounds are used in order to track water masses and/or microbial processes.

  6. Microbial transformation of the Deepwater Horizon oil spill – past, present, and future perspectives

    Directory of Open Access Journals (Sweden)

    Nikole E. Kimes

    2014-11-01

    Full Text Available The Deepwater Horizon blowout, which occurred on April 20, 2010, resulted in an unprecedented oil spill. Despite a complex effort to cap the well, oil and gas spewed from the site until July 15, 2010. Although a large proportion of the hydrocarbons was depleted via natural processes and human intervention, a substantial portion of the oil remained unaccounted for and impacted multiple ecosystems throughout the Gulf of Mexico. The depth, duration and magnitude of this spill were unique, raising many questions and concerns regarding the fate of the hydrocarbons released. One major question was whether or not microbial communities would be capable of metabolizing the hydrocarbons, and if so, by what mechanisms and to what extent? In this review, we summarize the microbial response to the oil spill as described by studies performed during the past four years, providing an overview of the different responses associated with the water column, surface waters, deep-sea sediments, and coastal sands/sediments. Collectively, these studies provide evidence that the microbial response to the Deepwater Horizon oil spill was rapid and robust, displaying common attenuation mechanisms optimized for low molecular weight aliphatic and aromatic hydrocarbons. In contrast, the lack of evidence for the attenuation of more recalcitrant hydrocarbon components suggests that future work should focus on both the environmental impact and metabolic fate of recalcitrant compounds, such as oxygenated oil components.

  7. Investigating the role for adaptation of the microbial community to transform trace organic chemicals during managed aquifer recharge

    KAUST Repository

    Alidina, Mazahirali

    2014-06-01

    This study was undertaken to investigate whether adaptation by pre-exposure to trace organic chemicals (TOrCs) was necessary for microbial transformation during managed aquifer recharge (MAR). Two pairs of laboratory-scale soil columns, each receiving a different primary substrate, were utilized to simulate the dominant bulk organic carbon present in MAR systems receiving wastewater effluent of varying quality and having undergone different degrees of pre-treatment, as well as organic carbon prevalent at different stages of subsurface travel. Each pair of columns consisted of duplicate set-ups receiving the same feed solution with only one pre-exposed to a suite of eight TOrCs for approximately ten months. Following the pre-exposure period, a spiking experiment was conducted in which the non-exposed columns also received the same suite of TOrCs. TOrC attenuation was quantified for the pre- and non-exposed columns of each pair during the spiking experiment. The microbial community structure and function of these systems were characterized by pyrosequencing of 16S rRNA gene and metagenomics, respectively. Biotransformation rather than sorption was identified as the dominant removal mechanism for almost all the TOrCs (except triclocarban). Similar removal efficiencies were observed between pre-exposed and non-exposed columns for most TOrCs. No obvious differences in microbial community structure were revealed between pre- and non-exposed columns. Using metagenomics, biotransformation capacity potentials of the microbial community present were also similar between pre- and non-exposed columns of each pair. Overall, the pre-exposure of MAR systems to TOrCs at ng/L levels did not affect their attenuation and had no obvious influence on the resulting microbial community structure and function. Thus, other factors such as bioavailability of the primary substrate play a greater role regarding biotransformation of TOrCs. These results indicate that MAR systems adapted to a

  8. Investigating the role for adaptation of the microbial community to transform trace organic chemicals during managed aquifer recharge.

    Science.gov (United States)

    Alidina, Mazahirali; Li, Dong; Drewes, Jörg E

    2014-06-01

    This study was undertaken to investigate whether adaptation by pre-exposure to trace organic chemicals (TOrCs) was necessary for microbial transformation during managed aquifer recharge (MAR). Two pairs of laboratory-scale soil columns, each receiving a different primary substrate, were utilized to simulate the dominant bulk organic carbon present in MAR systems receiving wastewater effluent of varying quality and having undergone different degrees of pre-treatment, as well as organic carbon prevalent at different stages of subsurface travel. Each pair of columns consisted of duplicate set-ups receiving the same feed solution with only one pre-exposed to a suite of eight TOrCs for approximately ten months. Following the pre-exposure period, a spiking experiment was conducted in which the non-exposed columns also received the same suite of TOrCs. TOrC attenuation was quantified for the pre- and non-exposed columns of each pair during the spiking experiment. The microbial community structure and function of these systems were characterized by pyrosequencing of 16S rRNA gene and metagenomics, respectively. Biotransformation rather than sorption was identified as the dominant removal mechanism for almost all the TOrCs (except triclocarban). Similar removal efficiencies were observed between pre-exposed and non-exposed columns for most TOrCs. No obvious differences in microbial community structure were revealed between pre- and non-exposed columns. Using metagenomics, biotransformation capacity potentials of the microbial community present were also similar between pre- and non-exposed columns of each pair. Overall, the pre-exposure of MAR systems to TOrCs at ng/L levels did not affect their attenuation and had no obvious influence on the resulting microbial community structure and function. Thus, other factors such as bioavailability of the primary substrate play a greater role regarding biotransformation of TOrCs. These results indicate that MAR systems adapted to a

  9. ENANTIOSELECTIVE MICROBIAL TRANSFORMATION OF THE PHENYLPYRAZOLE INSECTICIDE FIPRONIL IN ANOXIC SEDIMENTS

    Science.gov (United States)

    Fipronil, a chiral insecticide, was biotransformed initially to fipronil sulfide in anoxic sediment slurries following a short lag period. Sediment slurries characterized as either sulfidogenic or methanogenic transformed fipronil with half-lives of approximately 35 and 40 days, ...

  10. MICROBIAL TRANSFORMATIONS OF PLUTONIUM AND OTHER ACTINIDES IN TRANSURANIC AND MIXED WASTES

    International Nuclear Information System (INIS)

    The presence of the actinides Th, U, Np, Pu, and Am in transuranic (TRU) and mixed wastes is a major concern because of their potential for migration from the waste repositories and long-term contamination of the environment. The toxicity of the actinide elements and the long half-lives of their isotopes are the primary causes for concern. In addition to the radionuclides the TRU waste consists a variety of organic materials (cellulose, plastic, rubber, chelating agents) and inorganic compounds (nitrate and sulfate). Significant microbial activity is expected in the waste because of the presence of organic compounds and nitrate, which serve as carbon and nitrogen sources and in the absence of oxygen the microbes can use nitrate and sulfate as alternate electron acceptors. Biodegradation of the TRU waste can result in gas generation and pressurization of containment areas, and waste volume reduction and subsidence in the repository. Although the physical, chemical, and geochemical processes affecting dissolution, precipitation, and mobilization of actinides have been investigated, we have only limited information on the effects of microbial processes. Microbial activity could affect the chemical nature of the actinides by altering the speciation, solubility and sorption properties and thus could increase or decrease the concentrations of actinides in solution. Under appropriate conditions, dissolution or immobilization of actinides is brought about by direct enzymatic or indirect non-enzymatic actions of microorganisms. Dissolution of actinides by microorganisms is brought about by changes in the Eh and pH of the medium, by their production of organic acids, such as citric acid, siderophores and extracellular metabolites. Immobilization or precipitation of actinides is due to changes in the Eh of the environment, enzymatic reductive precipitation (reduction from higher to lower oxidation state), biosorption, bioaccumulation, biotransformation of actinides complexed

  11. Changes of resistome, mobilome and potential hosts of antibiotic resistance genes during the transformation of anaerobic digestion from mesophilic to thermophilic.

    Science.gov (United States)

    Tian, Zhe; Zhang, Yu; Yu, Bo; Yang, Min

    2016-07-01

    This study aimed to reveal how antibiotic resistance genes (ARGs) and their horizontal and vertical transfer-related items (mobilome and bacterial hosts) respond to the transformation of anaerobic digestion (AD) from mesophilic to thermophilic using one-step temperature increase. The resistomes and mobilomes of mesophilic and thermophilic sludge were investigated using metagenome sequencing, and the changes in 24 representative ARGs belonging to three categories, class 1 integron and bacterial genera during the transition period were further followed using quantitative PCR and 454-pyrosequencing. After the temperature increase, resistome abundance in the digested sludge decreased from 125.97 ppm (day 0, mesophilic) to 50.65 ppm (day 57, thermophilic) with the reduction of most ARG types except for the aminoglycoside resistance genes. Thermophilic sludge also had a smaller mobilome, including plasmids, insertion sequences and integrons, than that of mesophilic sludge, suggesting the lower horizontal transfer potential of ARGs under thermophilic conditions. On the other hand, the total abundance of 18 bacterial genera, which were suggested as the possible hosts for 13 ARGs through network analysis, decreased from 23.27% in mesophilic sludge to 11.92% in thermophilic sludge, indicating fewer hosts for the vertical expansion of ARGs after the increase in temperature. These results indicate that the better reduction of resistome abundance by thermophilic AD might be associated with the decrease of both the horizontal and vertical transferability of ARGs. PMID:27108212

  12. Anaerobic biotransformation of estrogens

    Energy Technology Data Exchange (ETDEWEB)

    Czajka, Cynthia P. [Department of Microbiology, University of Manitoba, Winnipeg, MB, R3T 2N2 (Canada); Londry, Kathleen L. [Department of Microbiology, University of Manitoba, Winnipeg, MB, R3T 2N2 (Canada)]. E-mail: londryk@cc.umanitoba.ca

    2006-08-31

    Estrogens are important environmental contaminants that disrupt endocrine systems and feminize male fish. We investigated the potential for anaerobic biodegradation of the estrogens 17-{alpha}-ethynylestradiol (EE2) and 17-{beta}-estradiol (E2) in order to understand their fate in aquatic and terrestrial environments. Cultures were established using lake water and sediment under methanogenic, sulfate-, iron-, and nitrate-reducing conditions. Anaerobic degradation of EE2 (added at 5 mg/L) was not observed in multiple trials over long incubation periods (over three years). E2 (added at 5 mg/L) was transformed to estrone (E1) under all four anaerobic conditions (99-176 {mu}g L{sup -1} day{sup -1}), but the extent of conversion was different for each electron acceptor. The oxidation of E2 to E1 was not inhibited by E1. Under some conditions, reversible inter-conversion of E2 and E1 was observed, and the final steady state concentration of E2 depended on the electron-accepting condition but was independent of the total amount of estrogens added. In addition, racemization occurred and E1 was also transformed to 17-{alpha}-estradiol under all but nitrate-reducing conditions. Although E2 could be readily transformed to E1 and in many cases 17-{alpha}-estradiol under anaerobic conditions, the complete degradation of estrogens under these conditions was minimal, suggesting that they would accumulate in anoxic environments.

  13. Performances and microbial features of an aerobic packed-bed biofilm reactor developed to post-treat an olive mill effluent from an anaerobic GAC reactor

    Directory of Open Access Journals (Sweden)

    Marchetti Leonardo

    2006-04-01

    Full Text Available Abstract Background Olive mill wastewater (OMW is the aqueous effluent of olive oil producing processes. Given its high COD and content of phenols, it has to be decontaminated before being discharged. Anaerobic digestion is one of the most promising treatment process for such an effluent, as it combines high decontamination efficiency with methane production. The large scale anaerobic digestion of OMWs is normally conducted in dispersed-growth reactors, where however are generally achieved unsatisfactory COD removal and methane production yields. The possibility of intensifying the performance of the process using a packed bed biofilm reactor, as anaerobic treatment alternative, was demonstrated. Even in this case, however, a post-treatment step is required to further reduce the COD. In this work, a biological post-treatment, consisting of an aerobic biological "Manville" silica bead-packed bed aerobic reactor, was developed, tested for its ability to complete COD removal from the anaerobic digestion effluents, and characterized biologically through molecular tools. Results The aerobic post-treatment was assessed through a 2 month-continuous feeding with the digested effluent at 50.42 and 2.04 gl-1day-1 of COD and phenol loading rates, respectively. It was found to be a stable process, able to remove 24 and 39% of such organic loads, respectively, and to account for 1/4 of the overall decontamination efficiency displayed by the anaerobic-aerobic integrated system when fed with an amended OMW at 31.74 and 1.70 gl-1day-1 of COD and phenol loading rates, respectively. Analysis of 16S rRNA gene sequences of biomass samples from the aerobic reactor biofilm revealed that it was colonized by Rhodobacterales, Bacteroidales, Pseudomonadales, Enterobacteriales, Rhodocyclales and genera incertae sedis TM7. Some taxons occurring in the influent were not detected in the biofilm, whereas others, such as Paracoccus, Pseudomonas, Acinetobacter and Enterobacter

  14. Potential Application of Anaerobic Extremophiles for Hydrogen Production

    Science.gov (United States)

    Pikuta, Elena V.; Hoover, Richard B.

    2004-01-01

    During substrate fermentation many anaerobes produce the hydrogen as a waste product, which often regulates the growth of the cultures as an inhibitor. In nature the hydrogen is usually removed from the ecosystem due to its physical properties or by consumption of hydrogen by secondary anaerobes, which sometimes behave as competitors for electron donors as is seen in the classical example in anaerobic microbial communities via the interaction between methanogens and sulfate- or sulfur- reducers. It was demonstrated previously on mixed cultures of anaerobes at neutral pH that bacterial hydrogen production could provide an alternative energy source. But at neutral pH the original cultures can easily be contaminated by methanogens, a most unpleasant side effect of these conditions is the development of pathogenic bacteria. In both cases the rate of hydrogen production was dramatically decreased since some part of the hydrogen was transformed to methane, and the cultivation of human pathogens on a global scale is very dangerous. In our laboratory, experiments with obligately alkaliphilic bacteria that excrete hydrogen as the end metabolic product were performed at different temperature regimes. Mesophilic and moderately thermophilic bacterial cultures have been studied and compared for the most effective hydrogen production. For high-mineralized media with pH 9.5-10.0 not many methanogens are known to exist. Furthermore, the development of pathogenic contaminant microorganisms is virtually impossible: carbonate-saturated solutions are used as antiseptics in medicine. Therefore the cultivation of alkaliphilic hydrogen producing bacteria could be considered as most safe process for global Scale industry in future. Here we present experimental data on the rates of hydrogen productivity for mesophilic, alkaliphilic, obligately anaerobic bacterium Spirocheta americana ASpG1 and moderately thermophilic, alkaliphilic, facultative anaerobe Anoxybacillus pushchinoensis K1 and

  15. The anaerobic digestion process

    Energy Technology Data Exchange (ETDEWEB)

    Rivard, C.J. [National Renewable Energy Lab., Golden, CO (United States); Boone, D.R. [Oregon Graduate Inst., Portland, OR (United States)

    1996-01-01

    The microbial process of converting organic matter into methane and carbon dioxide is so complex that anaerobic digesters have long been treated as {open_quotes}black boxes.{close_quotes} Research into this process during the past few decades has gradually unraveled this complexity, but many questions remain. The major biochemical reactions for forming methane by methanogens are largely understood, and evolutionary studies indicate that these microbes are as different from bacteria as they are from plants and animals. In anaerobic digesters, methanogens are at the terminus of a metabolic web, in which the reactions of myriads of other microbes produce a very limited range of compounds - mainly acetate, hydrogen, and formate - on which the methanogens grow and from which they form methane. {open_quotes}Interspecies hydrogen-transfer{close_quotes} and {open_quotes}interspecies formate-transfer{close_quotes} are major mechanisms by which methanogens obtain their substrates and by which volatile fatty acids are degraded. Present understanding of these reactions and other complex interactions among the bacteria involved in anaerobic digestion is only now to the point where anaerobic digesters need no longer be treated as black boxes.

  16. Changes in Microbial Nitrogen Transformation Processes along a Chronosequence in the Forefield of the Damma Glacier

    Science.gov (United States)

    Töwe, S.; Brankatschk, R.; Schauß, K.; Munch, J. C.; Zeyer, J.; Schloter, M.

    2009-04-01

    Due to the retreat of glaciers, the development of initial soil ecosystems can nicely be observed. Especially in young ecosystems the nitrogen cycle plays a major role because nitrogen is an important factor for the functionality and development of biotic communities. Especially dinitrogen fixation plays an important role for the additional nitrogen input into the soil. Furthermore an optimal nitrogen turnover, including an efficient mineralization of organic nitrogen compounds and low denitrification rates are important for a sustainable development of vegetation. The aim of this study was to characterize the N turnover mainly nitrogen fixation, nitrification, denitrification and mineralization on gene and enzyme levels at different development stages of the soil ecosystem. For this purpose soil samples were taken along a chronosequence (10, 50, 70, 120, and older than 1000 years) from the forefield of the Damma Glacier (Canton Uri, Switzerland). We determined potential enzyme activities of each of the four mentioned processes and measured by quantitative PCR the corresponding functional bacterial genes nifH (nitrogenase), amoA (ammonia monooxygenase of bacteria and archaea), nirK and nirS (nitrite reductases), nosZ (nitrous oxide reductase), npr (neutral metallopeptidase) and apr (alkaline metallopeptidase). Additionally, we investigated the concentrations of dissolved organic carbon (DOC), dissolved organic nitrogen (DON), nitrate (NO3-) and ammonium (NH4+) and quantified the microbial biomass carbon (Cmic). First results show an increase in potential nitrification and denitrification activities with increasing soil age which is confirmed by qPCR. However, gene abundances related to the biomass exhibit higher numbers of denitrifying and nitrifiying bacteria in young development stages than in the more developed soils. Especially nirS denitrifying bacteria and bacterial ammonia oxidizers seem to play a major role in young soil development stages. The measurement

  17. Microbial and 'de novo' transformation of dicarboxylic acids by three airborne fungi

    International Nuclear Information System (INIS)

    Micro-organisms and organic compounds of biogenic or anthropogenic origins are important constituents of atmospheric aerosols, which are involved in atmospheric processes and climate change. In order to investigate the role of fungi and their metabolisation activity, we collected airborne fungi using a biosampler in an urban location of Montreal, Quebec, Canada (45o 28' N, 73o 45' E). After isolation on Sabouraud dextrose agar, we exposed isolated colonies to dicarboxylic acids (C2-C7), a major group of organic aerosols and monitored their growth. Depending on the acid, total fungi numbers varied from 35 (oxalic acid) to 180 CFU/mL (glutaric acid). Transformation kinetics of malonic acid, presumably the most abundant dicarboxylic acid, at concentrations of 0.25 and 1.00 mM for isolated airborne fungi belonging to the genera Aspergillus, Penicillium, Eupenicillium, and Thysanophora with the fastest transformation rate are presented. The initial concentration was halved within 4.5 and 11.4 days. Other collected fungi did not show a significant degradation and the malonic acid concentration remained unchanged (0.25 and 1.00 mM) within 20 days. Degradation of acid with formation of metabolites was followed using high performance liquid chromatography-ultraviolet detection (HPLC/UV) and gas chromatography-mass spectrometry (GC/MS), as well as monitoring of 13C labelled malonic acid degradation with solid-state nuclear magnetic resonance spectroscopy (NMR). Using GC/MS we identified two processes driving chemical modifications of organic aerosol solutions: (I) formation of metabolites within several days, and (II) rapid release (≤ 2 min) of organic molecules from fungal species upon the insertion of taxa in organic aerosol solutions. Metabolites included aromatic compounds and alcohols (e.g. trimethylbenzene and butanol). Potential atmospheric implications of our results are discussed

  18. Anaerobic Biodegradation of Ethylene Glycol within Hydraulic Fracturing Fluid

    Science.gov (United States)

    Heyob, K. M.; Mouser, P. J.

    2014-12-01

    Ethylene glycol (EG) is a commonly used organic additive in hydraulic fracturing fluids used for shale gas recovery. Under aerobic conditions, this compound readily biodegrades to acetate and CO2 or is oxidized through the glycerate pathway. In the absence of oxygen, organisms within genera Desulfovibrio, Acetobacterium, and others can transform EG to acetaldehyde, a flammable and suspected carcinogenic compound. Acetaldehyde can then be enzymatically degraded to ethanol or acetate and CO2. However, little is known on how EG degrades in the presence of other organic additives, particularly under anaerobic conditions representative of deep groundwater aquifers. To better understand the fate and attenuation of glycols within hydraulic fracturing fluids we are assessing their biodegradation potential and pathways in batch anaerobic microcosm treatments. Crushed Berea sandstone was inoculated with groundwater and incubated with either EG or a synthetic fracturing fluid (SFF) containing EG formulations. We tracked changes in dissolved organic carbon (DOC), EG, and its transformation products over several months. Approximately 41% of bulk DOC in SFF is degraded within 21 days, with 58% DOC still remaining after 63 days. By comparison, this same SFF degrades by 70% within 25 days when inoculated with sediment-groundwater microbial communities, suggesting that bulk DOC degradation occurs at a slower rate and to a lesser extent with bedrock. Aerobic biodegradation of EG occurs rapidly (3-7 days); however anaerobic degradation of EG is much slower, requiring several weeks for substantial DOC loss to be observed. Ongoing experiments are tracking the degradation pathways of EG alone and in the presence of SFF, with preliminary data showing incomplete glycol transformation within the complex hydraulic fracturing fluid mixture. This research will help to elucidate rates, processes, and pathways for EG biodegradation and identify key microbial taxa involved in its degradation.

  19. Anaerobic Mercury Methylation and Demethylation by Geobacter bemidjiensis Bem.

    Science.gov (United States)

    Lu, Xia; Liu, Yurong; Johs, Alexander; Zhao, Linduo; Wang, Tieshan; Yang, Ziming; Lin, Hui; Elias, Dwayne A; Pierce, Eric M; Liang, Liyuan; Barkay, Tamar; Gu, Baohua

    2016-04-19

    Microbial methylation and demethylation are two competing processes controlling the net production and bioaccumulation of neurotoxic methylmercury (MeHg) in natural ecosystems. Although mercury (Hg) methylation by anaerobic microorganisms and demethylation by aerobic Hg-resistant bacteria have both been extensively studied, little attention has been given to MeHg degradation by anaerobic bacteria, particularly the iron-reducing bacterium Geobacter bemidjiensis Bem. Here we report, for the first time, that the strain G. bemidjiensis Bem can mediate a suite of Hg transformations, including Hg(II) reduction, Hg(0) oxidation, MeHg production and degradation under anoxic conditions. Results suggest that G. bemidjiensis utilizes a reductive demethylation pathway to degrade MeHg, with elemental Hg(0) as the major reaction product, possibly due to the presence of genes encoding homologues of an organomercurial lyase (MerB) and a mercuric reductase (MerA). In addition, the cells can strongly sorb Hg(II) and MeHg, reduce or oxidize Hg, resulting in both time and concentration-dependent Hg species transformations. Moderate concentrations (10-500 μM) of Hg-binding ligands such as cysteine enhance Hg(II) methylation but inhibit MeHg degradation. These findings indicate a cycle of Hg methylation and demethylation among anaerobic bacteria, thereby influencing net MeHg production in anoxic water and sediments. PMID:27019098

  20. Anaerobic bacteria

    Science.gov (United States)

    Brook I, Goldstein EJ. Diseases caused by non-spore forming anaerobic bacteria. In: Goldman L, Schafer AI, eds. Goldman's Cecil Medicine . 25th ed. Philadelphia, PA: Elsevier Saunders; 2015:chap 297. Stedman's Online ...

  1. Development and Application of an Enzymatic and Cell Flotation Treatment for the Recovery of Viable Microbial Cells from Environmental Matrices Such as Anaerobic Sludge▿

    OpenAIRE

    Braun, Florence; Hamelin, Jérôme; Gévaudan, Gaëlle; Patureau, Dominique

    2011-01-01

    Efficient dissociation of microorganisms from their aggregate matrix is required to study the microorganisms without interaction with their native environment (e.g., biofilms, flocs, granules, etc.) and to assess their community composition through the application of molecular or microscopy techniques. To this end, we combined enzymatic treatments and a cell extraction by density gradient to efficiently recover anaerobic microorganisms from urban wastewater treatment plant sludge. The enzymes...

  2. Development and application of an enzymatic and cell flotation treatment for the recovery of viable microbial cells from environmental matrices such as anaerobic sludge

    OpenAIRE

    Braun, Florence; Hamelin, Jérôme; Gevaudan, Gaelle; Patureau, Dominique

    2011-01-01

    Efficient dissociation of microorganisms from their aggregate matrix is required to study the microorganisms without interaction with their native environment (e.g., biofilms, flocs, granules, etc.) and to assess their community composition through the application of molecular or microscopy techniques. To this end, we combined enzymatic treatments and a cell extraction by density gradient to efficiently recover anaerobic microorganisms from urban wastewater treatment plant sludge. The enzymes...

  3. A microbial transformation using Bacillus subtilis B7-S to produce natural vanillin from ferulic acid.

    Science.gov (United States)

    Chen, Peng; Yan, Lei; Wu, Zhengrong; Li, Suyue; Bai, Zhongtian; Yan, Xiaojuan; Wang, Ningbo; Liang, Ning; Li, Hongyu

    2016-01-01

    Bacillus subtilis strain B7-S screened from18 strains is an aerobic, endospore-forming, model organism of Gram-positive bacteria which is capable to form vanillin during ferulic acid bioconversion. The bioconversion of ferulic acid to vanillin by Bacillus subtilis B7-S (B. subtilis B7-S) was investigated. Based on our results, the optimum bioconversion conditions for the production of vanillin by B. subtilis B7-S can be summarized as follows: temperature 35 °C; initial pH 9.0; inoculum volume 5%; ferulic acid concentration 0.6 g/L; volume of culture medium 20%; and shaking speed 200 r/min. Under these conditions, several repeated small-scale batch experiments showed that the maximum conversion efficiency was 63.30% after 3 h of bioconversion. The vanillin products were confirmed by spectral data achieved from UV-vis, inductively coupled plasma atomic emission spectroscope (ICP-AES) and Fourier transform infrared spectrometer (FT-IR) spectra. Scanning electron microscopy (SEM) and transmission electron spectroscopy (TEM) results confirmed that the cell surface of B. subtilis plays a role in the induction of ferulic acid tolerance. These results demonstrate that B. subtilis B7-S has the potential for use in vanillin production through bioconversion of ferulic acid. PMID:26841717

  4. Microbial interactions chapter: binding and entry of DNA in bacterial transformation

    Energy Technology Data Exchange (ETDEWEB)

    Lacks, S.A.

    1977-01-01

    Genetic transformation of bacteria by DNA released from cells of a related strain is discussed. The mechanism by which the giant information-bearing molecules of DNA are transported into the bacterial cell was investigated. It was concluded that the overall process of DNA uptake consists of two main steps, binding of donor DNA to the outside of the cell and entry of the bound DNA into the cell. Each step is discussed in detail. Inasmuch as these phenomena occur at the cell surface, they are related to structures and functions of the cell wall and membrane. In addition, the development of competence, that is the formation of cell surface structures allowing DNA uptake, is examined from both a physiological and evolutionary point of view. Genetic transfer mediated by free DNA is an obvious and important form of cellular interaction. The development of competence involves another, quite distinct system of interaction between bacterial cells. Streptococcus pneumoniae, Bacillus subtilis, and Hemophilus influenzae were used as the test organisms. 259 references.

  5. Microbial- and Thiosulfate-Mediated Dissolution of Mercury Sulfide Minerals and Transformation to Gaseous Mercury

    Directory of Open Access Journals (Sweden)

    Adiari eVázquez-Rodríguez

    2015-06-01

    Full Text Available Mercury (Hg is a toxic heavy metal that poses significant human and environmental health risks. Soils and sediments, where Hg can exist as the Hg sulfide mineral metacinnabar (β-HgS, represent major Hg reservoirs in aquatic environments. Metacinnabar has historically been considered a sink for Hg in all but severely acidic environments, and thus disregarded as a potential source of Hg back to aqueous or gaseous pools. Here, we conducted a combination of field and laboratory incubations to identify the potential for metacinnabar as a source of dissolved Hg within near neutral pH environments and the underpinning (abiotic mechanisms at play. We show that the abundant and widespread sulfur-oxidizing bacterium Thiobacillus extensively colonized metacinnabar chips incubated within aerobic, near neutral pH creek sediments. Laboratory incubations of axenic Thiobacillus cultures lead to the release of metacinnabar-hosted Hg(II and subsequent volatilization to Hg(0. This dissolution and volatilization was greatly enhanced in the presence of the sulfur intermediate, thiosulfate, which served a dual role by enhancing HgS dissolution and providing an additional metabolic substrate for Thiobacillus. These findings reveal a new coupled abiotic-biotic pathway for the transformation of metacinnabar-bound Hg(II to Hg(0, while expanding the sulfide substrates available for neutrophilic chemosynthetic bacteria to Hg-laden sulfides. They also point to mineral-hosted Hg as an underappreciated source of gaseous elemental Hg to the environment.

  6. ATTENUATED TOTAL REFLECTANCE-FOURIER-TRANSFORM INFRARED MICROSPECTROSCOPY A RAPID METHOD FOR MICROBIAL STRAIN CHARACTERIZATION

    Directory of Open Access Journals (Sweden)

    Meshref Awad Alruwaili

    2013-01-01

    Full Text Available Fourier-Transform Infrared (FTIR spectroscopy and BHI 50CH were used to identify bacteria of the Lactobacillus (L. at the species level. A previously developed method for measuring FTIR spectra and a strategy for their analysis provided the basis for selecting the FTIR spectra of reference bacterial strains and created a spectral library. The research was launched in which the spectra collected in the above library were used for developing a spectral reference for known reference bacterial strains and the practical value of the generated library was verified based on the results of identification of four bacterial strains viz. L. plantarum, L. casei, L. lactis and L. fermentum of known taxonomy as well as identification of 15 bacterial strains isolated from rumen extracts and identified on the basis of their taxonomy and biochemical tests. The application of prepared lactic acid bacteria reference library for analysis of advanced analysis of FTIR was provided an accurate identification of 90% of bacterial strains of the genus Lactic acid bacteria identified by FTIR-microspectroscopy.

  7. Transformation

    DEFF Research Database (Denmark)

    Peters, Terri

    2011-01-01

    Artiklen diskuterer ordet "transformation" med udgangspunkt i dels hvorledes ordet bruges i arkitektfaglig terminologi og dels med fokus på ordets potentielle indhold og egnethed i samme teminologi.......Artiklen diskuterer ordet "transformation" med udgangspunkt i dels hvorledes ordet bruges i arkitektfaglig terminologi og dels med fokus på ordets potentielle indhold og egnethed i samme teminologi....

  8. TRANSFORMATION

    Energy Technology Data Exchange (ETDEWEB)

    LACKS,S.A.

    2003-10-09

    Transformation, which alters the genetic makeup of an individual, is a concept that intrigues the human imagination. In Streptococcus pneumoniae such transformation was first demonstrated. Perhaps our fascination with genetics derived from our ancestors observing their own progeny, with its retention and assortment of parental traits, but such interest must have been accelerated after the dawn of agriculture. It was in pea plants that Gregor Mendel in the late 1800s examined inherited traits and found them to be determined by physical elements, or genes, passed from parents to progeny. In our day, the material basis of these genetic determinants was revealed to be DNA by the lowly bacteria, in particular, the pneumococcus. For this species, transformation by free DNA is a sexual process that enables cells to sport new combinations of genes and traits. Genetic transformation of the type found in S. pneumoniae occurs naturally in many species of bacteria (70), but, initially only a few other transformable species were found, namely, Haemophilus influenzae, Neisseria meningitides, Neisseria gonorrheae, and Bacillus subtilis (96). Natural transformation, which requires a set of genes evolved for the purpose, contrasts with artificial transformation, which is accomplished by shocking cells either electrically, as in electroporation, or by ionic and temperature shifts. Although such artificial treatments can introduce very small amounts of DNA into virtually any type of cell, the amounts introduced by natural transformation are a million-fold greater, and S. pneumoniae can take up as much as 10% of its cellular DNA content (40).

  9. Detection of methoxylated and hydroxylated polychlorinated biphenyls in sewage sludge in China with evidence for their microbial transformation.

    Science.gov (United States)

    Sun, Jianteng; Zhu, Lizhong; Pan, Lili; Wei, Zi; Song, Yao; Zhang, Yuduo; Qu, Liping; Zhan, Yu

    2016-01-01

    The concentrations of methoxylated polychlorinated biphenyls (MeO-PCBs) and hydroxylated polychlorinated biphenyls (OH-PCBs) were measured in the sewage sludge samples collected from twelve wastewater treatment plants in China. Two MeO-PCB congeners, including 3'-MeO-CB-65 and 4'-MeO-CB-101, were detected in three sludge with mean concentrations of 0.58 and 0.52 ng/g dry weight, respectively. OH-PCBs were detected in eight sludge samples, with an average total concentration of 4.2 ng/g dry weight. Furthermore, laboratory exposure was conducted to determine the possible source of OH-PCBs and MeO-PCBs in the sewage sludge, and their metabolism by the microbes. Both 4'-OH-CB-101 and 4'-MeO-CB-101 were detected as metabolites of CB-101 at a limited conversion rate after 5 days. Importantly, microbial interconversion between OH-PCBs and MeO-PCBs was observed in sewage sludge. Demethylation of MeO-PCBs was favored over methylation of OH-PCBs. The abundant and diverse microbes in sludge play a key role in the transformation processes of the PCB analogues. To our knowledge, this is the first report on MeO-PCBs in environmental matrices and on OH-PCBs in sewage sludge. The findings are important to understand the environmental fate of PCBs. PMID:27417462

  10. Detection of methoxylated and hydroxylated polychlorinated biphenyls in sewage sludge in China with evidence for their microbial transformation

    Science.gov (United States)

    Sun, Jianteng; Zhu, Lizhong; Pan, Lili; Wei, Zi; Song, Yao; Zhang, Yuduo; Qu, Liping; Zhan, Yu

    2016-07-01

    The concentrations of methoxylated polychlorinated biphenyls (MeO-PCBs) and hydroxylated polychlorinated biphenyls (OH-PCBs) were measured in the sewage sludge samples collected from twelve wastewater treatment plants in China. Two MeO-PCB congeners, including 3‧-MeO-CB-65 and 4‧-MeO-CB-101, were detected in three sludge with mean concentrations of 0.58 and 0.52 ng/g dry weight, respectively. OH-PCBs were detected in eight sludge samples, with an average total concentration of 4.2 ng/g dry weight. Furthermore, laboratory exposure was conducted to determine the possible source of OH-PCBs and MeO-PCBs in the sewage sludge, and their metabolism by the microbes. Both 4‧-OH-CB-101 and 4‧-MeO-CB-101 were detected as metabolites of CB-101 at a limited conversion rate after 5 days. Importantly, microbial interconversion between OH-PCBs and MeO-PCBs was observed in sewage sludge. Demethylation of MeO-PCBs was favored over methylation of OH-PCBs. The abundant and diverse microbes in sludge play a key role in the transformation processes of the PCB analogues. To our knowledge, this is the first report on MeO-PCBs in environmental matrices and on OH-PCBs in sewage sludge. The findings are important to understand the environmental fate of PCBs.

  11. Molecular ecology of anaerobic reactor systems

    DEFF Research Database (Denmark)

    Hofman-Bang, H. Jacob Peider; Zheng, D.; Westermann, Peter; Ahring, Birgitte Kiær; Raskin, L.

    2003-01-01

    Anaerobic reactor systems are essential for the treatment of solid and liquid wastes and constitute a core facility in many waste treatment plants. Although much is known about the basic metabolism in different types of anaerobic reactors, little is known about the microbes responsible for these ...... specific nucleic acid probes are discussed and exemplified by studies of anaerobic granular sludge, biofilm and digester systems...... malfunctions of anaerobic digesters occasionally experienced, leading to sub-optimal methane production and wastewater treatment. Using a variety of molecular techniques, we are able to determine which microorganisms are active, where they are active, and when they are active, but we still need to determine...... abundance of each microbe in anaerobic reactor systems by rRNA probing. This chapter focuses on various molecular techniques employed and problems encountered when elucidating the microbial ecology of anaerobic reactor systems. Methods such as quantitative dot blot/fluorescence in-situ probing using various...

  12. TRANSFORMER

    Science.gov (United States)

    Baker, W.R.

    1959-08-25

    Transformers of a type adapted for use with extreme high power vacuum tubes where current requirements may be of the order of 2,000 to 200,000 amperes are described. The transformer casing has the form of a re-entrant section being extended through an opening in one end of the cylinder to form a coaxial terminal arrangement. A toroidal multi-turn primary winding is disposed within the casing in coaxial relationship therein. In a second embodiment, means are provided for forming the casing as a multi-turn secondary. The transformer is characterized by minimized resistance heating, minimized external magnetic flux, and an economical construction.

  13. Anaerobic degradation of 1,1,2,2-tetrachloroethane and association with microbial communities in a freshwater tidal wetland, Aberdeen Proving Ground, Maryland : laboratory experiments and comparisons to field data

    Science.gov (United States)

    Lorah, Michelle M.; Voytek, Mary A.; Kirshtein, Julie D.; Jones, Elizabeth J., (Phillips)

    2003-01-01

    Defining biodegradation rates and processes is a critical part of assessing the feasibility of monitored natural attenuation as a remediation method for ground water containing organic contaminants. During 1998?2001, the U.S. Geological Survey conducted a microbial study at a freshwater tidal wetland along the West Branch Canal Creek, Aberdeen Proving Ground, Maryland, as part of an investigation of natural attenuation of chlorinated volatile organic compounds (VOCs) in the wetland sediments. Geochemical analyses and molecular biology techniques were used to investigate factors controlling anaerobic degradation of 1,1,2,2-tetrachloroethane (TeCA), and to characterize the microbial communities that potentially are important in its degradation. Rapid TeCA and daughter product degradation observed in laboratory experiments and estimated with field data confirm that natural attenuation is a feasible remediation method at this site. The diverse microbial community that seems to be involved in TeCA degradation in the wetland sediments varies with changing spatial and seasonal conditions, allowing continued effective natural attenuation throughout the year. Rates of TeCA degradation in anaerobic microcosm experiments conducted with wetland sediment collected from two different sites (WB23 and WB30) and during three different seasons (March?April 1999, July?August 1999, and October?November 2000) showed little spatial variability but high seasonal variability. Initial first-order degradation rate constants for TeCA ranged from 0.10?0.01 to 0.16?0.05 per day (half-lives of 4.3 to 6.9 days) for March?April 1999 and October?November 2000 microcosms incubated at 19 degrees Celsius, whereas lower rate constants of 0 ? 0.03 and 0.06 ? 0.03 per day were obtained in July?August 1999 microcosms incubated at 19 degrees Celsius. Microbial community profiles showed that low microbial biomass and microbial diversity in the summer, possibly due to competition for nutrients by the

  14. Biochar-mediated reductions in greenhouse gas emissions from soil amended with anaerobic digestates

    International Nuclear Information System (INIS)

    This investigation examines nitrous oxide (N2O) fluxes from soil with simultaneous amendments of anaerobic digestates and biochar. The main source of anthropogenic emissions of N2O is agriculture and in particular, manure and slurry application to fields. Anaerobic digestates are increasingly used as a fertiliser and interest is growing in their potential as sources of N2O via nitrification and denitrification. Biochar is a stable product of pyrolysis and may affect soil properties such as cation exchange capacity and water holding capacity. Whilst work has been conducted on the effects of biochar amendment on N2O emissions in soils fertilised with mineral fertilisers and raw animal manures, little work to date has focused on the effects of biochar on nitrogen transformations within soil amended with anaerobic digestates. The aim of the current investigation was to quantify the effects of biochar application on ammonification, nitrification and N2O fluxes within soil amended with three anaerobic digestates derived from different feedstocks. A factorial experiment was undertaken in which a sandy loam soil (Dunnington Heath series) was either left untreated, or amended with three different anaerobic digestates and one of three biochar treatments; 0%, 1% or 3%. Nitrous oxide emissions were greatest from soil amended with anaerobic digestate originating from a maize feedstock. Biochar amendment reduced N2O emissions from all treatments, with the greatest effect observed in treatments with maximum emissions. The degree of N2O production and efficacy of biochar amelioration of gas emissions is discussed in context of soil microbial biomass and soil available carbon. - Highlights: • Nitrous oxide was emitted from anaerobic digestates applied to soil. • Simultaneous amendment of soil with biochar and anaerobic digestate reduced N2O emissions. • Soil nitrate accumulation occurred but was digestate dependent

  15. Deeper insight into the structure of the anaerobic digestion microbial community; the biogas microbiome database is expanded with 157 new genomes

    DEFF Research Database (Denmark)

    Treu, Laura; Kougias, Panagiotis; Campanaro, Stefano;

    2016-01-01

    This research aimed to better characterize the biogas microbiome by means of high throughput metagenomic sequencing and to elucidate the core microbial consortium existing in biogas reactors independently from the operational conditions. Assembly of shotgun reads followed by an established binning...... strategy resulted in the highest, up to now, extraction of microbial genomes involved in biogas producing systems. From the 236 extracted genome bins, it was remarkably found that the vast majority of them could only be characterized at high taxonomic levels. This result confirms that the biogas microbiome...

  16. Anaerobic fungal populations

    International Nuclear Information System (INIS)

    The development of molecular techniques has greatly broadened our view of microbial diversity and enabled a more complete detection and description of microbial communities. The application of these techniques provides a simple means of following community changes, for example, Ishii et al. described transient and more stable inhabitants in another dynamic microbial system, compost. Our present knowledge of anaerobic gut fungal population diversity within the gastrointestinal tract is based upon isolation, cultivation and observations in vivo. It is likely that there are many species yet to be described, some of which may be non-culturable. We have observed a distinct difference in the ease of cultivation between the different genera, for example, Caecomyes isolates are especially difficult to isolate and maintain in vitro, a feature that is likely to result in the under representation of this genera in culture-based enumerations. The anaerobic gut fungi are the only known obligately anaerobic fungi. For the majority of their life cycles, they are found tightly associated with solid digesta in the rumen and/or hindgut. They produce potent fibrolytic enzymes and grow invasively on and into the plant material they are digesting making them important contributors to fibre digestion. This close association with intestinal digesta has made it difficult to accurately determine the amount of fungal biomass present in the rumen, with Orpin suggesting 8% contribution to the total microbial biomass, whereas Rezaeian et al. more recently gave a value of approximately 20%. It is clear that the rumen microbial complement is affected by dietary changes, and that the fungi are more important in digestion in the rumens of animals fed with high-fibre diets. It seems likely that the gut fungi play an important role within the rumen as primary colonizers of plant fibre, and so we are particularly interested in being able to measure the appearance and diversity of fungi on the plant

  17. Anaerobic Digestion of Piggery Waste

    OpenAIRE

    Velsen, van, L.S.

    1981-01-01

    Anaerobic digestion is a biological process by which organic matter is converted to methane and carbon dioxide by microbes in the absence of air (oxygen). In nature, anaerobic conversions occur at all places where organic material accumulates and the supply of oxygen is deficient, e.g. in marshes and lake sediments. Microbial formation of methane also plays a role in the ruminant digestion.In digestion units, the external conditions acting upon the process can be regulated to speed it up as c...

  18. Dissolved nitrogen transformations and microbial community structure in the organic layer of forest soils in Olkiluoto in 2006

    International Nuclear Information System (INIS)

    Carbon (C) and nitrogen (N) cycles in the ecosystem are strongly coupled. Biomass, structure and activity of the bacterial and fungal community are the key factors influencing C and N cycles. Changes in the function of soil microbial community can be a signal of plant responses to environmental changes. Dissolved N compounds, microbial biomass, microbial activity, fungal community structure and functional diversity of microbial communities were measured in September 2006 from five monitoring plots on Olkiluoto to assess information about soil microbial community structure and activity. High within and between variation in the studied plots were detected. However, in this study the values and their variation in the level of N mineralisation, dissolved N compounds, fungal biomass and microbial community structure in the studied plots were within a normal range in comparison with other published data of similar forest types in Finland. (orig.)

  19. Microbial Communities and Their Performances in Anaerobic Hybrid Sludge Bed-Fixed Film Reactor for Treatment of Palm Oil Mill Effluent under Various Organic Pollutant Concentrations

    OpenAIRE

    Kanlayanee Meesap; Nimaradee Boonapatcharoen; Somkiet Techkarnjanaruk; Pawinee Chaiprasert

    2012-01-01

    The anaerobic hybrid reactor consisting of sludge and packed zones was operated with organic pollutant loading rates from 6.2 to 8.2 g COD/L day, composed mainly of suspended solids (SS) and oil and grease (O&G) concentrations between 5.2 to 10.2 and 0.9 to 1.9 g/L, respectively. The overall process performance in terms of chemical oxygen demands (COD), SS, and O&G removals was 73, 63, and 56%, respectively. When the organic pollutant concentrations were increased, the resultant methane poten...

  20. Temperature determines the pattern of anaerobic microbial dechlorination of Aroclor 1260 primed by 2,3,4,6-tetrachlorobiphenyl in Woods Pond sediment.

    OpenAIRE

    Wu, Q; Bedard, D L; Wiegel, J

    1997-01-01

    Reductive dechlorination of the Aroclor 1260 residue in Woods Pond (Lenox, Mass.) sediment samples was investigated for a year at incubation temperatures from 4 to 66 degrees C. Sediment slurries were incubated anaerobically with and without 2,3,4,6-tetrachlorobiphenyl (2346-CB; 350 microM) as a primer for dechlorination of the Aroclor 1260 residue. Dechlorination of the Aroclor residue occurred only in live samples primed with 2346-CB and only at 8 to 34 degrees C and 50 to 60 degrees C. The...

  1. Mitigation of ammonia inhibition by internal dilution in high-rate anaerobic digestion of food waste leachate and evidences of microbial community response.

    Science.gov (United States)

    Yun, Yeo-Myeong; Kim, Dong-Hoon; Cho, Si-Kyung; Shin, Hang-Sik; Jung, Kyung-Won; Kim, Hyun-Woo

    2016-09-01

    A high-rate anaerobic digestion of food waste leachate were tested using intermittent continuously stirred tank reactors (iCSTRs) to evaluate how severe ammonia inhibition could be mitigated with internal dilution strategy, and to identify how bacterial and archaeal community respond in genus and species level. Experimental results show that the digestion performance was well maintained up to hydraulic retention time (HRT) of 40 days but could not keep steady-state as HRT decreased to 30 days due to severe free ammonia (FA) inhibition. Coupling internal dilution was the key to relieve the inhibition since it reduced FA concentration as low as 62 mg/L even at HRT 30 days, which corresponds to organic loading rate of 5 g COD/L/d, demonstrating CH4 yield of 0.32 L CH4 /g CODadded . It was confirmed that the dilution offers iCTSRs manage severe ammonia inhibition with the balanced community structure between bacteria and archaea in this high-rate anaerobic digestion. Genus and species level pyrosequencing evidence that FA inhibition to community dynamics of Methanosarcina and Methanosaeta is strongly connected to methanogenesis, and Methanosarcina plays a key role in an iCSTR with the dilution. Biotechnol. Bioeng. 2016;113: 1892-1901. © 2016 Wiley Periodicals, Inc. PMID:26927830

  2. Microbial Mineral Transformations at the Fe(II)/Fe(III) Redox Boundary for Solid Phase Capture of Strontium and Other Metal/Radionuclide Contaminants

    International Nuclear Information System (INIS)

    The migration of 90Sr in groundwater is a significant environmental concern at former nuclear weapons production sites in the US and abroad. Although retardation of 90Sr transport relative to mean groundwater velocity is known to occur in contaminated aquifers, Sr2+ does not sorb as strongly to iron oxides and other mineral phases as do other metal-radionuclides contaminants. Thus, some potential exists for extensive 90Sr migration from sources of contamination. Chemical or biological processes capable of retarding or immobilizing Sr2+ in groundwater environments are of interest from the standpoint of understanding controls on subsurface Sr2+ migration. In addition, it may be possible to exploit such processes for remediation of subsurface Sr contamination. In this study the authors examined the potential for the solid phase sorption and incorporation of Sr2+ into carbonate minerals formed during microbial Fe(III) oxide reduction as a first step toward evaluating whether this process could be used to promote retardation of 90Sr migrations in anaerobic subsurface environments. The demonstration of Sr2+ capture in carbonate mineral phases formed during bacterial HFO reduction and urea hydrolysis suggests that microbial carbonate mineral formation could contribute to Sr2+ retardation in groundwater environments. This process may also provide a mechanism for subsurface remediation of Sr2+ and other divalent metal contaminants that form insoluble carbonate precipitates

  3. Anaerobic degradation of linear alkylbenzene sulfonate

    DEFF Research Database (Denmark)

    Mogensen, Anders Skibsted; Haagensen, Frank; Ahring, Birgitte Kiær

    2003-01-01

    increases during anaerobic stabilization due to transformation of easily degradable organic matter. Hence, LAS is regarded as resistant to biodegradation under anaerobic conditions. We present data from a lab-scale semi-continuously stirred tank reactor (CSTR) spiked with linear dodecylbenzene sulfonate (C...

  4. Deeper insight into the structure of the anaerobic digestion microbial community; the biogas microbiome database is expanded with 157 new genomes.

    Science.gov (United States)

    Treu, Laura; Kougias, Panagiotis G; Campanaro, Stefano; Bassani, Ilaria; Angelidaki, Irini

    2016-09-01

    This research aimed to better characterize the biogas microbiome by means of high throughput metagenomic sequencing and to elucidate the core microbial consortium existing in biogas reactors independently from the operational conditions. Assembly of shotgun reads followed by an established binning strategy resulted in the highest, up to now, extraction of microbial genomes involved in biogas producing systems. From the 236 extracted genome bins, it was remarkably found that the vast majority of them could only be characterized at high taxonomic levels. This result confirms that the biogas microbiome is comprised by a consortium of unknown species. A comparative analysis between the genome bins of the current study and those extracted from a previous metagenomic assembly demonstrated a similar phylogenetic distribution of the main taxa. Finally, this analysis led to the identification of a subset of common microbes that could be considered as the core essential group in biogas production. PMID:27243603

  5. Syntrophic interactions and mechanisms underpinning anaerobic methane oxidation: targeted metaproteogenomics, single-cell protein detection and quantitative isotope imaging of microbial consortia

    Energy Technology Data Exchange (ETDEWEB)

    Orphan, Victoria Jeanne [California Institute of Technology

    2014-11-26

    Syntrophy and mutualism play a central role in carbon and nutrient cycling by microorganisms. Yet, our ability to effectively study symbionts in culture has been hindered by the inherent interdependence of syntrophic associations, their dynamic behavior, and their frequent existence at thermodynamic limits. Now solutions to these challenges are emerging in the form of new methodologies. Developing strategies that establish links between the identity of microorganisms and their metabolic potential, as well as techniques that can probe metabolic networks on a scale that captures individual molecule exchange and processing, is at the forefront of microbial ecology. Understanding the interactions between microorganisms on this level, at a resolution previously intractable, will lead to our greater understanding of carbon turnover and microbial community resilience to environmental perturbations. In this project, we studied an enigmatic syntrophic association between uncultured methane-oxidizing archaea and sulfate-reducing bacteria. This environmental archaeal-bacterial partnership represents a globally important sink for methane in anoxic environments. The specific goals of this project were organized into 3 major tasks designed to address questions relating to the ecophysiology of these syntrophic organisms under changing environmental conditions (e.g. different electron acceptors and nutrients), primarily through the development of microanalytical imaging methods which enable the visualization of the spatial distribution of the partners within aggregates, consumption and exchange of isotopically labeled substrates, and expression of targeted proteins identified via metaproteomics. The advanced tool set developed here to collect, correlate, and analyze these high resolution image and isotope-based datasets from methane-oxidizing consortia has the potential to be widely applicable for studying and modeling patterns of activity and interactions across a broad range of

  6. Changes in microbial community structure in two anaerobic systems to treat bagasse spraying wastewater with and without addition of molasses alcohol wastewater.

    Science.gov (United States)

    Shen, Peihong; Zhang, Junya; Zhang, Jian; Jiang, Chengjian; Tang, Xianlai; Li, Junfang; Zhang, Min; Wu, Bo

    2013-03-01

    This study investigates the microbial community and structure in the internal circulation (IC) reactors that treat wastewater from bagasse spraying, with (reactor B) and without (reactor A) addition of molasses alcohol wastewater (MAW). The V3 regions in the 16S rRNA of bacteria were sequenced using illumina sequencing to characterize the microbial community structures. The results showed that there were approximately 34.8% more microorganisms were reduced, while the proportions of the three most predominant bacterial populations especially some sulfate-reducing bacteria increased in reactor B. The archaeal community composition was measured by PCR-DGGE (denaturing gradient gel electrophoresis) analysis and sequencing some clones from the 16S rRNA gene library. The results showed that numerous, mostly uncharacterized, archaeal genera are present in reactors A and B; the genus Methanomethylovorans was only detected in the samples that received MAW. This study demonstrated the significant effect of MAW on microbial communities in the wastewater treatment bioreactor. PMID:23370216

  7. Reduction of the hydraulic retention time at constant high organic loading rate to reach the microbial limits of anaerobic digestion in various reactor systems.

    Science.gov (United States)

    Ziganshin, Ayrat M; Schmidt, Thomas; Lv, Zuopeng; Liebetrau, Jan; Richnow, Hans Hermann; Kleinsteuber, Sabine; Nikolausz, Marcell

    2016-10-01

    The effects of hydraulic retention time (HRT) reduction at constant high organic loading rate on the activity of hydrogen-producing bacteria and methanogens were investigated in reactors digesting thin stillage. Stable isotope fingerprinting was additionally applied to assess methanogenic pathways. Based on hydA gene transcripts, Clostridiales was the most active hydrogen-producing order in continuous stirred tank reactor (CSTR), fixed-bed reactor (FBR) and anaerobic sequencing batch reactor (ASBR), but shorter HRT stimulated the activity of Spirochaetales. Further decreasing HRT diminished Spirochaetales activity in systems with biomass retention. Based on mcrA gene transcripts, Methanoculleus and Methanosarcina were the predominantly active in CSTR and ASBR, whereas Methanosaeta and Methanospirillum activity was more significant in stably performing FBR. Isotope values indicated the predominance of aceticlastic pathway in FBR. Interestingly, an increased activity of Methanosaeta was observed during shortening HRT in CSTR and ASBR despite high organic acids concentrations, what was supported by stable isotope data. PMID:26853042

  8. Optimization and microbial community analysis for production of biogas from solid waste residues of palm oil mill industry by solid-state anaerobic digestion.

    Science.gov (United States)

    Suksong, Wantanasak; Kongjan, Prawit; Prasertsan, Poonsuk; Imai, Tsuyoshi; O-Thong, Sompong

    2016-08-01

    This study investigated the improvement of biogas production from solid-state anaerobic digestion (SS-AD) of oil palm biomass by optimizing of total solids (TS) contents, feedstock to inoculum (F:I) ratios and carbon to nitrogen (C:N) ratios. Highest methane yield from EFB, OPF and OPT of 358, 280 and 324m(3)CH4ton(-1)VS, respectively, was achieved at TS content of 16%, C:N ratio of 30:1 and F:I ratio of 2:1. The main contribution to methane from biomass was the degradation of cellulose and hemicellulose. The highest methane production of 72m(3)CH4ton(-1) biomass was achieved from EFB. Bacteria community structure in SS-AD process of oil palm biomass was dominated by Ruminococcus sp. and Clostridium sp., while archaea community was dominated by Methanoculleus sp. Oil palm biomass has great potential for methane production via SS-AD. PMID:27132224

  9. Microbial transformation of tetralin.

    NARCIS (Netherlands)

    Sikkema, J.

    1993-01-01

    Biocatalytic oxidation of cyclic hydrocarbons has many potential applications in the production of fine chemicals. Especially regioselective hydroxylation of aromatics and the stereospecific formation of secondary alcohols is of interest for the pharmaceutical and flavoring industries. Hydroxylating

  10. Molecular ecology of anaerobic reactor systems

    DEFF Research Database (Denmark)

    Hofman-Bang, H. Jacob Peider; Zheng, D.; Westermann, Peter;

    2003-01-01

    Anaerobic reactor systems are essential for the treatment of solid and liquid wastes and constitute a core facility in many waste treatment plants. Although much is known about the basic metabolism in different types of anaerobic reactors, little is known about the microbes responsible...... to the abundance of each microbe in anaerobic reactor systems by rRNA probing. This chapter focuses on various molecular techniques employed and problems encountered when elucidating the microbial ecology of anaerobic reactor systems. Methods such as quantitative dot blot/fluorescence in-situ probing using various...... and malfunctions of anaerobic digesters occasionally experienced, leading to sub-optimal methane production and wastewater treatment. Using a variety of molecular techniques, we are able to determine which microorganisms are active, where they are active, and when they are active, but we still need to determine...

  11. The effect of microbial iron oxidation on arsenic mobility and transformation%微生物铁氧化作用对砷迁移转化的影响

    Institute of Scientific and Technical Information of China (English)

    王兆苏; 王新军; 陈学萍; 朱永官

    2011-01-01

    采用厌氧培养的方法,从砷污染的水稻上中富集依赖硝酸盐的铁氧化菌群,通过监测培养体系中Fe和A$的形态变化模拟水稻厌氧条件下微生物铁氧化过程对As迁移转化的影响.结果表明,约96%外源添加的Fe(Ⅱ)可在10d内氧化成Fe(Ⅲ),As(Ⅲ)对Fe(Ⅱ)的初期氧化速率具有一定的抑制作用;在微生物铁氧化过程中,As(Ⅲ)被氧化成As(Ⅴ),并吸附在生成的铁氧化物表面或与其共沉淀.微牛物的铁氧化过程可能降低了As的移动性,从而抑制水稻对砷的吸收,降低了砷污染对人体健康的风险.%To observe the effect of the Fe( Ⅱ )-oxidizing process on As mobility and transformation, anaerobic nitrate-dependent Fe-oxidizing bacteria were enriched from an arsenic (As) polluted paddy soil. The Fe and As speciation and concentrations were monitored throughout an incubation experiment.The results showed that 96% Fe( Ⅱ ) was oxidized in 10 days; and simultaneously, As( Ⅲ ) was oxidized to As(Ⅴ), which was adsorbed or coprecipitated by the newly formed Fe( Ⅲ) oxide. The oxidizing rate of Fe(Ⅱ) was restrained by As( Ⅲ ) at the initial stage. These results indicate that As mobility is potentially limited by microbial iron oxidation in the paddy soil, and subsequently As uptake by rice could be decreased.

  12. Influence of thermophilic aerobic digestion as a sludge pre-treatment and solids retention time of mesophilic anaerobic digestion on the methane production, sludge digestion and microbial communities in a sequential digestion process.

    Science.gov (United States)

    Jang, Hyun Min; Cho, Hyun Uk; Park, Sang Kyu; Ha, Jeong Hyub; Park, Jong Moon

    2014-01-01

    In this study, the changes in sludge reduction, methane production and microbial community structures in a process involving two-stage thermophilic aerobic digestion (TAD) and mesophilic anaerobic digestion (MAD) under different solid retention times (SRTs) between 10 and 40 days were investigated. The TAD reactor (RTAD) was operated with a 1-day SRT and the MAD reactor (RMAD) was operated at three different SRTs: 39, 19 and 9 days. For a comparison, control MAD (RCONTROL) was operated at three different SRTs of 40, 20 and 10 days. Our results reveal that the sequential TAD-MAD process has about 42% higher methane production rate (MPR) and 15% higher TCOD removal than those of RCONTROL when the SRT decreased from 40 to 20 days. Denaturing gradient gel electrophoresis (DGGE) and real-time PCR results indicate that RMAD maintained a more diverse bacteria and archaea population compared to RCONTROL, due to the application of the biological TAD pre-treatment process. In RTAD, Ureibacillus thermophiles and Bacterium thermus were the major contributors to the increase in soluble organic matter. In contrast, Methanosaeta concilii, a strictly aceticlastic methanogen, showed the highest population during the operation of overall SRTs in RMAD. Interestingly, as the SRT decreased to 20 days, syntrophic VFA oxidizing bacteria, Clostridium ultunense sp., and a hydrogenotrophic methanogen, Methanobacterium beijingense were detected in RMAD and RCONTROL. Meanwhile, the proportion of archaea to total microbe in RMAD and RCONTROL shows highest values of 10.5 and 6.5% at 20-d SRT operation, respectively. Collectively, these results demonstrate that the increased COD removal and methane production at different SRTs in RMAD might be attributed to the increased synergism among microbial species by improving the hydrolysis of the rate limiting step in sludge with the help of the biological TAD pre-treatment. PMID:23871253

  13. Anaerobic co-digestion of vegetal oil and thickened waste-activated sludge: Effects on biogas production and microbial community structure

    OpenAIRE

    Lauwers, Joost; Appels, Lise; Ruyters, Stefan; Busschaert, Pieter; Lievens, Bart; Van Impe, Jan; Dewil, Raf

    2013-01-01

    Thickened waste-activated sludge (tWAS) was co-digested with vegetal oil in a continuous 50 L digester. Compared to a digester fed with only tWAS, the biogas production increased as expected due to the addition of oil: about 60 % for an oil load of 10-15 % of the volatile solids (VS) load and a triplication for an oil load of 37-44%. Using 454 pyrosequencing, the microbial community structure was analyzed and visualised in a non-metric multidimensional scaling. The community of the Bacte...

  14. Characterization of extracellular polymeric substances and microbial diversity in anaerobic co-digestion reactor treated sewage sludge with fat, oil, grease.

    Science.gov (United States)

    Yang, Zhao-Hui; Xu, Rui; Zheng, Yue; Chen, Ting; Zhao, Li-Jun; Li, Min

    2016-07-01

    Performance of co-digesters, treated of sewage sludge (SS) with fat, oil and grease (FOG), were conducted semi-continuously in two mesophilic reactors over 180days. Compared with SS mono-digestion, biogas production and TS removal efficiency of co-digestion were significantly enhanced up to 35% and 26% by adding upper limit FOG (60% on VS). Enhancement in co-digestion performance was also stimulated by the release of extracellular polymeric substances (EPS), which was increased 40% in both loosely bound EPS (LB-EPS) and tightly bound EPS (TB-EPS) than that of mono-digester. Based on high-throughput sequencing (HTS), analysis of microbial 16S rRNA gene comprehensively revealed the dynamic change of microbial community. Results showed that both bacterial and archaeal undergone an apparent succession with FOG addition, and large amount of consortium like Methanosaeta and N09 were involved in the process. Redundancy analysis showed the acetoclastic genera Methanosaeta distinctly related with biogas production and EPS degradation. PMID:27099941

  15. Nitrification and denitrification gene abundances in swine wastewater anaerobic lagoons

    Science.gov (United States)

    Although anaerobic lagoons are used globally for livestock waste treatment, their detailed microbial cycling of nitrogen is only beginning to become understood. Within this cycling, nitrification can be performed by organisms which produce the enzyme ammonia monooxygenase (AMO). For denitrification,...

  16. Anaerobic workout

    OpenAIRE

    McAdam, Ewan J.

    2010-01-01

    Anaerobic technology cannot directly replace current wastewater treatment processes exclusively. The UASB reactor configuration removes slightly less organic carbon by comparison as the process relies on lamella separation for passive clarification rather than using fine pores like anMBR. By contrast, whilst anMBR can operate as a single unit process for organic carbon removal, the membrane surface has to be cleaned using gas sparging to limit surface deposition, which requires extra energy. ...

  17. Tandem transformation of glycerol to esters.

    Science.gov (United States)

    Sotenko, Maria V; Rebroš, Martin; Sans, Victor S; Loponov, Konstantin N; Davidson, Matthew G; Stephens, Gill; Lapkin, Alexei A

    2012-12-31

    Tandem transformation of glycerol via microbial fermentation and enzymatic esterification is presented. The reaction can be performed with purified waste glycerol from biodiesel production in a continuous mode, combining continuous fermentation with membrane-supported enzymatic esterification. Continuous anaerobic fermentation was optimized resulting in the productivity of 2.4 g L⁻¹ h⁻¹ of 1,3-propanediol. Biphasic esterification of 1,3-propanediol was optimized to achieve ester yield of up to 75%. A hollow fibre membrane contactor with immobilized Rhizomucor miehei lipase was demonstrated for the continuous tandem fermentation-esterification process. PMID:22796408

  18. Anaerobic degradation of Polychlorinated Biphenyls (PCBs) and Polychlorinated Biphenyls Ethers (PBDEs), and microbial community dynamics of electronic waste-contaminated soil

    Energy Technology Data Exchange (ETDEWEB)

    Song, Mengke [Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou 510640 (China); Graduate University of Chinese Academy of Sciences, Beijing 100039 (China); Luo, Chunling, E-mail: clluo@gig.ac.cn [Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou 510640 (China); Li, Fangbai [Guangdong Institute of Eco-environmental and Soil Sciences, Guangzhou 510650 (China); Jiang, Longfei [Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou 510640 (China); College of Life Sciences, Nanjing Agricultural University, Nanjing 210095 (China); Wang, Yan [Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou 510640 (China); Zhang, Dayi [Lancaster Environment Centre, Lancaster University, Lancaster LA1 4YQ (United Kingdom); Zhang, Gan [Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou 510640 (China)

    2015-01-01

    Environmental contamination caused by electronic waste (e-waste) recycling is attracting increasing attention worldwide because of the threats posed to ecosystems and human safety. In the present study, we investigated the feasibility of in situ bioremediation of e-waste-contaminated soils. We found that, in the presence of lactate as an electron donor, higher halogenated congeners were converted to lower congeners via anaerobic halorespiration using ferrous ions in contaminated soil. The 16S rRNA gene sequences of terminal restriction fragments indicated that the three dominant strains were closely related to known dissimilatory iron-reducing bacteria (DIRB) and those able to perform dehalogenation upon respiration. The functional species performed the activities of ferrous oxidation to ferric ions and further ferrous reduction for dehalogenation. The present study links iron cycling to degradation of halogenated materials in natural e-waste-contaminated soil, and highlights the synergistic roles of soil bacteria and ferrous/ferric ion cycling in the dehalogenation of polychlorinated biphenyls (PCBs) and polybrominated biphenyl ethers (PBDEs). - Highlights: • The biodegradation PCBs and PBDEs in e-waste contaminated soils was studied. • DIRB and arylhalorespiring bacteria were responsive to dehalogenation respiration. • Soil bacteria and Fe ion cycling play synergistic roles in dehalogenation.

  19. Anaerobic degradation of Polychlorinated Biphenyls (PCBs) and Polychlorinated Biphenyls Ethers (PBDEs), and microbial community dynamics of electronic waste-contaminated soil

    International Nuclear Information System (INIS)

    Environmental contamination caused by electronic waste (e-waste) recycling is attracting increasing attention worldwide because of the threats posed to ecosystems and human safety. In the present study, we investigated the feasibility of in situ bioremediation of e-waste-contaminated soils. We found that, in the presence of lactate as an electron donor, higher halogenated congeners were converted to lower congeners via anaerobic halorespiration using ferrous ions in contaminated soil. The 16S rRNA gene sequences of terminal restriction fragments indicated that the three dominant strains were closely related to known dissimilatory iron-reducing bacteria (DIRB) and those able to perform dehalogenation upon respiration. The functional species performed the activities of ferrous oxidation to ferric ions and further ferrous reduction for dehalogenation. The present study links iron cycling to degradation of halogenated materials in natural e-waste-contaminated soil, and highlights the synergistic roles of soil bacteria and ferrous/ferric ion cycling in the dehalogenation of polychlorinated biphenyls (PCBs) and polybrominated biphenyl ethers (PBDEs). - Highlights: • The biodegradation PCBs and PBDEs in e-waste contaminated soils was studied. • DIRB and arylhalorespiring bacteria were responsive to dehalogenation respiration. • Soil bacteria and Fe ion cycling play synergistic roles in dehalogenation

  20. The effect of algae species on the bioelectricity and biodiesel generation through open-air cathode microbial fuel cell with kitchen waste anaerobically digested effluent as substrate.

    Science.gov (United States)

    Hou, Qingjie; Nie, Changliang; Pei, Haiyan; Hu, Wenrong; Jiang, Liqun; Yang, Zhigang

    2016-10-01

    Five strains algae (Golenkinia sp. SDEC-16, Chlorella vulgaris, Selenastrum capricornutum, Scenedesmus SDEC-8 and Scenedesmus SDEC-13) were screened as an effective way to promote recover electricity from MFC for kitchen waste anaerobically digested effluent (KWADE) treatment. The highest OCV, power density, biomass concentration and total lipid content were obtained with Golenkinia sp. SDEC-16 as the co-inoculum, which were 170mV, 6255mWm(-3), 325mgL(-1) and 38%, respectively. Characteristics of the organics in KWADE were analyzed, and the result showed that the hydrophilic and acidic fractions were more readily degraded, compared to the neutral fractions during the operation. Maximum COD and TN removal efficiency were 43.59% and 37.39% when inoculated with Golenkinia sp. SDEC-16, which were roughly 3.22 and 3.04 times higher than that of S. capricornutum. This study demonstrated that Golenkinia sp. SDEC-16 was a promising species for bioelectricity generation, lipid production and KWADE treatment. PMID:27441827

  1. Biogenic Hydrogen Conversion of De-Oiled Jatropha Waste via Anaerobic Sequencing Batch Reactor Operation: Process Performance, Microbial Insights, and CO2 Reduction Efficiency

    Directory of Open Access Journals (Sweden)

    Gopalakrishnan Kumar

    2014-01-01

    Full Text Available We report the semicontinuous, direct (anaerobic sequencing batch reactor operation hydrogen fermentation of de-oiled jatropha waste (DJW. The effect of hydraulic retention time (HRT was studied and results show that the stable and peak hydrogen production rate of 1.48 L/L*d and hydrogen yield of 8.7 mL H2/g volatile solid added were attained when the reactor was operated at HRT 2 days (d with a DJW concentration of 200 g/L, temperature 55°C, and pH 6.5. Reduced HRT enhanced the production performance until 1.75 d. Further reduction has lowered the process efficiency in terms of biogas production and hydrogen gas content. The effluent from hydrogen fermentor was utilized for methane fermentation in batch reactors using pig slurry and cow dung as seed sources. The results revealed that pig slurry was a feasible seed source for methane generation. Peak methane production rate of 0.43 L CH4/L*d and methane yield of 20.5 mL CH4/g COD were observed at substrate concentration of 10 g COD/L, temperature 30°C, and pH 7.0. PCR-DGGE analysis revealed that combination of celluloytic and fermentative bacteria were present in the hydrogen producing ASBR.

  2. Biogenic Hydrogen Conversion of De-Oiled Jatropha Waste via Anaerobic Sequencing Batch Reactor Operation: Process Performance, Microbial Insights, and CO2 Reduction Efficiency

    Science.gov (United States)

    Lin, Chiu-Yue

    2014-01-01

    We report the semicontinuous, direct (anaerobic sequencing batch reactor operation) hydrogen fermentation of de-oiled jatropha waste (DJW). The effect of hydraulic retention time (HRT) was studied and results show that the stable and peak hydrogen production rate of 1.48 L/L∗d and hydrogen yield of 8.7 mL H2/g volatile solid added were attained when the reactor was operated at HRT 2 days (d) with a DJW concentration of 200 g/L, temperature 55°C, and pH 6.5. Reduced HRT enhanced the production performance until 1.75 d. Further reduction has lowered the process efficiency in terms of biogas production and hydrogen gas content. The effluent from hydrogen fermentor was utilized for methane fermentation in batch reactors using pig slurry and cow dung as seed sources. The results revealed that pig slurry was a feasible seed source for methane generation. Peak methane production rate of 0.43 L CH4/L∗d and methane yield of 20.5 mL CH4/g COD were observed at substrate concentration of 10 g COD/L, temperature 30°C, and pH 7.0. PCR-DGGE analysis revealed that combination of celluloytic and fermentative bacteria were present in the hydrogen producing ASBR. PMID:24672398

  3. Pellitorine, a Potential Anti-Cancer Lead Compound against HL60 and MCT-7 Cell Lines and Microbial Transformation of Piperine from Piper Nigrum

    Directory of Open Access Journals (Sweden)

    Gwendoline Cheng Lian Ee

    2010-04-01

    Full Text Available Pellitorine (1, which was isolated from the roots of Piper nigrum, showed strong cytotoxic activities against HL60 and MCT-7 cell lines. Microbial transformation of piperine (2 gave a new compound 5-[3,4-(methylenedioxyphenyl]-pent-2-ene piperidine (3. Two other alkaloids were also found from Piper nigrum. They are (E-1-[3’,4’-(methylenedioxycinnamoyl]piperidine (4 and 2,4-tetradecadienoic acid isobutyl amide (5. These compounds were isolated using chromatographic methods and their structures were elucidated using MS, IR and NMR techniques.

  4. Xylan degradation by the anaerobic bacterium Bacteroides xylanolyticus.

    OpenAIRE

    Schyns, P.J.Y.M.J.

    1997-01-01

    Plant cell walls are the major reservoir of fixed carbon in nature. The mineralization of the fiber material, the so called lignocellulosic complex, proceeds almost exclusively by microbial processes in both aerobic and anaerobic environments. In anaerobic microbial processes the energy of the plant polymers can be conserved in fermentation products. The valorization of agricultural waste plant materials can consist of low and high technological processes. These include the production of biog...

  5. Kinetic modeling and microbial assessment by fluorescent in situ hybridization in anaerobic sequencing batch biofilm reactors treating sulfate-rich wastewater

    Directory of Open Access Journals (Sweden)

    A. J. Silva

    2011-06-01

    Full Text Available This paper reports the results of applying anaerobic sequencing batch biofilm reactors (AnSBBR for treating sulfate-rich wastewater. The reactor was filled with polyurethane foam matrices or with eucalyptus charcoal, used as the support for biomass attachment. Synthetic wastewater was prepared with two ratios between chemical oxygen demand (COD and sulfate concentration (COD/SO4(2- of 0.4 and 3.2. For a COD/SO4(2- ratio of 3.2, the AnSBBR performance was influenced by the support material used; the average levels of organic matter removal were 67% and 81% in the reactors filled with polyurethane foam and charcoal, respectively, and both support materials were associated with similar levels of sulfate reduction (above 90%. In both reactors, sulfate-reducing bacteria (SRB represented more than 65% of the bacterial community. The kinetic model indicated equilibrium between complete- and incomplete-oxidizing SRB in the reactor filled with polyurethane foam and predominantly incomplete-oxidizing SRB in the reactor filled with charcoal. Methanogenic activity seems to have been the determining factor to explain the better performance of the reactor filled with charcoal to remove organic matter at a COD/SO4(2- ratio of 3.2. For a COD/SO4(2- ratio of 0.4, low values of sulfate reduction (around 32% and low reaction rates were observed as a result of the small SRB population (about 20% of the bacterial community. Although the support material did not affect overall performance for this condition, different degradation pathways were observed; incomplete oxidation of organic matter by SRB was the main kinetic pathway and methanogenesis was negligible in both reactors.

  6. Development of antibiotic resistance genes in microbial communities during long-term operation of anaerobic reactors in the treatment of pharmaceutical wastewater.

    Science.gov (United States)

    Aydin, Sevcan; Ince, Bahar; Ince, Orhan

    2015-10-15

    Biological treatment processes offer the ideal conditions in which a high diversity of microorganisms can grow and develop. The wastewater produced during these processes is contaminated with antibiotics and, as such, they provide the ideal setting for the acquisition and proliferation of antibiotic resistance genes (ARGs). This research investigated the occurrence and variation in the ARGs found during the one-year operation of the anaerobic sequencing batch reactors (SBRs) used to treat pharmaceutical wastewater that contained combinations of sulfamethoxazole-tetracycline-erythromycin (STE) and sulfamethoxazole-tetracycline (ST). The existence of eighteen ARGs encoding resistance to sulfamethoxazole (sul1, sul2, sul3), erythromycin (ermA, ermF, ermB, msrA, ereA), tetracycline (tetA, tetB, tetC, tetD, tetE, tetM, tetS, tetQ, tetW, tetX) and class Ι integron gene (intΙ 1) in the STE and ST reactors was investigated by quantitative real-time PCR. Due to the limited availability of primers to detect ARGs, Illumina sequencing was also performed on the sludge and effluent of the STE and ST reactors. Although there was good reactor performance in the SBRs, which corresponds to min 80% COD removal efficiency, tetA, tetB, sul1, sul2 and ermB genes were among those ARGs detected in the effluent from STE and ST reactors. A comparison of the ARGs acquired from the STE and ST reactors revealed that the effluent from the STE reactor had a higher number of ARGs than that from the ST reactor; this could be due to the synergistic effects of erythromycin. According to the expression of genes results, microorganisms achieve tetracycline and erythromycin resistance through a combination of three mechanisms: efflux pumping protein, modification of the antibiotic target and modifying enzymes. There was also a significant association between the presence of the class 1 integron and sulfamethoxazole resistance genes. PMID:26188597

  7. Evidence of hydrolytic route for anaerobic cyanide degradation.

    OpenAIRE

    Fallon, R. D.

    1992-01-01

    Products observed during anaerobic cyanide transformation are consistent with a hydrolytic pathway (HCN + H2O HCONH2 + H2O HCOOH + NH3). Formate, the most frequently observed product, was generally converted to bicarbonate. Formamide was rapidly hydrolyzed to formate upon exposure to the anaerobic consortium but was not detected as an intermediate of cyanide transformation.

  8. Effect of temperature increase from 55 to 65 degrees C on performance and microbial population dynamics of an anaerobic reactor treating cattle manure

    DEFF Research Database (Denmark)

    Ahring, Birgitte Kiær; Ibrahim, Ashraf; Mladenovska, Zuzana

    2001-01-01

    The effect of a temperature increase from 55 to 65 degreesC on process performance and microbial population dynamics were investigated in thermophilic, lab-scale, continuously stirred tank reactors. The reactors had a working volume of 3 l and were fed with cattle manure at an organic loading rate...... of 3 g VS/l reactor volume/d. The hydraulic retention time in the reactors was 15 days. A stable reactor performance was obtained for periods of three retention times both at 55 degreesC and 65 degreesC. At 65 degreesC methane yield stabilized at approximately 165 ml/g VS/d compared to 200 ml/g VS....../d at 55 degreesC. Simultaneously, Ibe level of total volatile fatty acids, VFA, increased from being below 0.3g/l to 1.8-2.4g acetate/l. The specific methanogenic activities (SMA) of biomass from the reactors were measured with acetate, propionate, butyrate, hydrogen, formate and glucose. At 65 degrees...

  9. Parallel characterization of anaerobic toluene- and ethylbenzene-degrading microbial consortia by PCR-denaturing gradient gel electrophoresis, RNA-DNA membrane hybridization, and DNA microarray technology

    Science.gov (United States)

    Koizumi, Yoshikazu; Kelly, John J.; Nakagawa, Tatsunori; Urakawa, Hidetoshi; El-Fantroussi, Said; Al-Muzaini, Saleh; Fukui, Manabu; Urushigawa, Yoshikuni; Stahl, David A.

    2002-01-01

    A mesophilic toluene-degrading consortium (TDC) and an ethylbenzene-degrading consortium (EDC) were established under sulfate-reducing conditions. These consortia were first characterized by denaturing gradient gel electrophoresis (DGGE) fingerprinting of PCR-amplified 16S rRNA gene fragments, followed by sequencing. The sequences of the major bands (T-1 and E-2) belonging to TDC and EDC, respectively, were affiliated with the family Desulfobacteriaceae. Another major band from EDC (E-1) was related to an uncultured non-sulfate-reducing soil bacterium. Oligonucleotide probes specific for the 16S rRNAs of target organisms corresponding to T-1, E-1, and E-2 were designed, and hybridization conditions were optimized for two analytical formats, membrane and DNA microarray hybridization. Both formats were used to characterize the TDC and EDC, and the results of both were consistent with DGGE analysis. In order to assess the utility of the microarray format for analysis of environmental samples, oil-contaminated sediments from the coast of Kuwait were analyzed. The DNA microarray successfully detected bacterial nucleic acids from these samples, but probes targeting specific groups of sulfate-reducing bacteria did not give positive signals. The results of this study demonstrate the limitations and the potential utility of DNA microarrays for microbial community analysis.

  10. Anaerobic Toxicity of Cationic Silver Nanoparticles

    Science.gov (United States)

    The microbial toxicity of silver nanoparticles (AgNPs) stabilized with different capping agents was compared to that of Ag+ under anaerobic conditions. Three AgNPs were investigated: (1) negatively charged citrate-coated AgNPs (citrate-AgNPs), (2) minimally charged p...

  11. 添加有益微生物厌氧消化木薯杆的效果研究%Experimental Investigation on the Beneficial Microbial Anaerobic Digestion of Cassava Rod

    Institute of Scientific and Technical Information of China (English)

    邹知明; 司红彬; 杨膺白; 邓玲姣; 游纯波

    2012-01-01

    [ Objective] To discuss the effects of anaerobic digestion of different straw starters on single,cassava-rod or mixed matrix. [ Method] Three types of starters, including active 99 fermentation agent( 1. 20 x 10 cfu/g) , enzyme-producing probiotics(2. 0 x 10 cfu/g) , and roughage degradation agent(2. 0 x 10 cfu/g), were selected. The cassava rod materials were added with microbial starter in the experimental group, but the same amount of water in the control group, after three-month anaerobic digestion of the matrix, the contents pf crude protein, crude fiber, crude fat, calcium, phosphorus, and amino acid were determined. [Result] The anaerobic digestion results were closely related to the type of starters and matrix. The roughage degradation agent can significantly improve the content of fat, phosphorus, aspartate, serine and alanine of single cassava-rod; Three kinds of starters had no significant effect on the contents of crude protein and crude fiber in single cassava-rod and mixed matrix; the roughage degradation agent had certain effect on improving the quality of cassava-rod feed, while enzyme-producing probiotics and energy 99 did not have. [Conclusion] The study selected the optimum starter for preparing bio-feeds with cassava rod.%[目的]探讨不同秸秆发酵剂厌氧消化单一木薯杆或混合基质的效果.[方法]选择活力99生酵剂(1.20x1010cfu/g)、产酶益生素(2.0×1010 cfu/g)、粗饲料降解剂(2.0×108 cfu/g)3种复合有益菌进行试验.试验组在木薯杆原料中添加微生物发酵剂,对照组只添加同量的水,厌氧消化基质3个月,测定其粗蛋白、粗纤维、粗脂肪、钙、磷、氨基酸含量.[结果]厌氧消化效果与秸秆发酵剂的种类有关,也与基质种类有关.粗饲料降解剂可以显著提高单一木薯杆的粗脂肪、磷、天冬氨酸、丝氨酸、丙氨酸含量;3种发酵剂对木薯杆混合和单一基质粗蛋白、粗纤维含量均无明显影响;粗饲料降解

  12. Integrated Microbial Electrolysis Cell (MEC) with an anaerobic Membrane Bioreactor (MBR) for low strength wastewater treatment, energy harvesting and water reclamation

    KAUST Repository

    Jimenez Sandoval, Rodrigo J.

    2013-11-01

    Shortage of potable water is a problem that affects many nations in the world and it will aggravate in a near future if pertinent actions are not carried out. Decrease in consumption, improvements in water distribution systems to avoid losses and more efficient water treatment processes are some actions that can be implemented to attack this problem. Membrane technology and biological processes are used in wastewater treatment to achieve high water quality standards. Some other technologies, besides water treatment, attempt to obtain energy from organic wastes present in water. In this study, a proof-of-concept was accomplished demonstrating that a Microbial Electrolysis Cell can be fully integrated with a Membrane Bioreactor to achieve wastewater treatment and harvest energy. Conductive hollow fiber membranes made of nickel functioned as both filter material for treated water reclamation and as a cathode to catalyze hydrogen production reaction. The produced hydrogen was subsequently converted into methane by hydrogenotrophic methanogens. Organic removal was 98.9% irrespective of operation mode. Maximum volumetric hydrogen production rate was 0.2 m3/m3d, while maximum current density achieved was 6.1 A/m2 (based on cathode surface area). Biofouling, an unavoidable phenomenon in traditional MBRs, can be minimized in this system through self-cleaning approach of hybrid membranes by hydrogen production. The increased rate of hydrogen evolution at high applied voltage (0.9 V) reduces the membrane fouling. Improvements can be done in the system to make it as a promising net energy positive technology for the low strength wastewater treatment.

  13. An integrated approach to study pharmaceuticals and their microbial transformation products: formation and environmental behavior in water/sediment systems

    OpenAIRE

    Li, Zhe

    2014-01-01

    Pharmaceuticals are emerging organic micropollutants that are frequently detected in the aquatic environment. While information on their environmental occurrence is substantial, knowledge gaps exist with respect to their environmental transformation. This licentiate thesis focuses on this research deficit by (1) providing and applying tools for identifying biotransformation products, and (2) investigating the behavior of pharmaceuticals and their transformation products (TPs) in two different...

  14. Impact of organic matter type on the efficiency and microbial community structure of an anaerobic digestion process%底物类型对产甲烷效能及微生物群落结构的影响

    Institute of Scientific and Technical Information of China (English)

    王昊昱; 陶彧; 任南琪

    2016-01-01

    In order to investigate the impact of organic matter type on the efficiency and microbial community structure during anaerobic digestion operation, an expanded granular sludge bed ( EGSB ) was applied to treat brewery spent grain hydrolysates ( BSGH ) and pig manure hydrolysates ( PMH ) that were pre-hydrolyzed by specific enzymes under thermophilic conditions. Results showed that after the organic matter of BSGH was altered by PMH, a series decrease of 40%, 75% and 25% was observed for the bulk COD removal, methane production and organic biomethanation rate, respectively. Meanwhile, the acetic acid concentration in the effluent increased from 50 mg/L to 3 700 mg/L. For the microbial community, the abundance of Firmicutes doubled after the substrate type changing, while Bacteroidetes decreased 50% instead. The quantity of methanogens dropped by 61% and the previously most abundant genus Methanosaeta was replaced by Methanobacterium.%为考察底物类型对厌氧消化过程的影响,以升流式厌氧膨胀床作为厌氧消化反应器,以经过"热-酶联合预水解"后的啤酒糟和猪粪作为处理对象,研究不同有机负荷率条件下反应器的运行效能和微生物群落结构.结果表明,当有机底物类型从啤酒糟转变为猪粪后,反应器的COD去除率降低40%,甲烷产量减少75%,有机物甲烷化率降低25%,且出水乙酸质量浓度由50 mg/L跃升至3 700 mg/L.同时,Firmicutes细菌门的丰度提高约1倍,Bacteroidetes细菌门的相对丰度则减少约50%;产甲烷菌数量减少61%,产甲烷菌属Methanobacterium替代Methanosaeta成为最占优势的古细菌菌属.

  15. Perspectives of the microbial carbon pump with special references to microbial respiration and ecological efficiency

    Directory of Open Access Journals (Sweden)

    H. Dang

    2014-01-01

    Full Text Available Although respiration consumes fixed carbon and produce CO2, it provides energy for essential biological processes of an ecosystem, including the microbial carbon pump (MCP. In MCP-driving biotransformation of labile DOC to recalcitrant DOC (RDOC, microbial respiration provides the metabolic energy for environmental organic substrate sensing, cellular enzyme syntheses and catalytic processes such as uptake, secretion, modification, fixation and storage of carbon compounds. The MCP efficiency of a heterotrophic microorganism is thus related to its energy production efficiency and hence to its respiration efficiency. Anaerobically respiring microbes usually have lower energy production efficiency and lower energy-dependent carbon transformation efficiency, and consequently lower MCP efficiency at per cell level. This effect is masked by the phenomena that anoxic environments often store more organic matter. Here we point out that organic carbon preservation and RDOC production is different in mechanisms, and anaerobically respiring ecosystems could also have lower MCP ecological efficiency. Typical cases can be found in large river estuarine ecosystems. Due to strong terrigenous input of nutrients and organic matter, estuarine ecosystems usually experience intense heterotrophic respiration processes that rapidly consume dissolved oxygen, potentially producing hypoxic and anoxic zones in the water column. The lowered availability of dissolved oxygen and the excessive supply of nutrients such as nitrate from river input prompt enhanced anaerobic respiration processes. Thus, some nutrients may be consumed by anaerobically respiring heterotrophic microorganisms, instead of being utilized by phytoplankton for carbon fixation and primary production. In this situation, the ecological functioning of the estuarine ecosystem is altered and the ecological efficiency is lowered, as less carbon is fixed and less energy is produced. Ultimately this would have

  16. Changes in Transformation of Soil Organic C and Functional Diversity of Soil Microbial Community Under Different Land Uses

    Institute of Scientific and Technical Information of China (English)

    LI Zhong-pei; WU Xiao-chen; CHEN Bi-yun

    2007-01-01

    Changes in soil biological and biochemical properties under different land uses in the subtropical region of China were investigated in order to develop rational cultivation and fertilization management. A small watershed of subtropical region of China was selected for this study. Land uses covered paddy fields, vegetable farming, fruit trees, upland crops, bamboo stands, and forestry. Soil biological and biochemical properties included soil organic C and nutrient contents, mineralization of soil organic C, and soil microbial biomass and community functional diversity. Soil organic C and total N contents, microbial biomass C and N, and respiration intensity under different land uses were changed in the following order: paddy fields (and vegetable farming) > bamboo stands > fruit trees (and upland). The top surface (0-15 cra) paddy fields (and vegetable farming) were 76.4 and 80.8% higher in soil organic C and total N contents than fruit trees (and upland) soils, respectively. Subsurface paddy soils (15-30 cm) were 59.8 and 67.3% higher in organic C and total N than upland soils, respectively. Soil microbial C, N and respiration intensity in paddy soils (0-15 cm) were 6.36, 3.63 and 3.20 times those in fruit tree (and upland) soils respectively. Soil microbial metabolic quotient was in the order: fruit trees (and upland) > forestry > paddy fields. Metabolic quotient in paddy soils was only 47.7% of that in fruit tree (and upland) soils.Rates of soil organic C mineralization during incubation changed in the order: paddy fields > bamboo stands > fruit trees (and upland) and soil bacteria population: paddy fields > fruit trees (and upland) > forestry. No significant difference was found for fungi and actinomycetes populations. BIOLOG analysis indicated a changing order of paddy fields > fruit trees (and upland) > forestry in values of the average well cell development (AWCD) and functional diversity indexes of microbial community. Results also

  17. Anaerobic decomposition of humic substances by Clostridium from the deep subsurface

    OpenAIRE

    Akio Ueno; Satoru Shimizu; Shuji Tamamura; Hidetoshi Okuyama; Takeshi Naganuma; Katsuhiko Kaneko

    2016-01-01

    Decomposition of humic substances (HSs) is a slow and cryptic but non-negligible component of carbon cycling in sediments. Aerobic decomposition of HSs by microorganisms in the surface environment has been well documented; however, the mechanism of anaerobic microbial decomposition of HSs is not completely understood. Moreover, no microorganisms capable of anaerobic decomposition of HSs have been isolated. Here, we report the anaerobic decomposition of humic acids (HAs) by the anaerobic bacte...

  18. Ecogenomics of microbial communities in bioremediation of chlorinated contaminated sites

    Directory of Open Access Journals (Sweden)

    Farai Maphosa

    2012-10-01

    Full Text Available Organohalide compounds such as chloroethenes, chloroethanes and polychlorinated benzenes are among the most significant pollutants in the world. These compounds are often found in contamination plumes with other pollutants such as solvents, pesticides and petroleum derivatives. Microbial bioremediation of contaminated sites, has become commonplace whereby key processes involved in bioremediation include anaerobic degradation and transformation of these organohalides by organohalide respiring bacteria and also via hydrolytic, oxygenic and reductive mechanisms by aerobic bacteria. Microbial ecogenomics has enabled us to not only study the microbiology involved in these complex processes but also develop tools to better monitor and assess these sites during bioremediation. Microbial ecogenomics have capitalized on recent advances in high-throughput and -output genomics technologies in combination with microbial physiology studies to address these complex bioremediation problems at a system level. Advances in environmental metagenomics, transcriptomics and proteomics have provided insights into key genes and their regulation in the environment. They have also given us clues into microbial community structures, dynamics and functions at contaminated sites. These techniques have not only aided us in understanding the lifestyles of common organohalide respirers, for example Dehalococcoides, Dehalobacter and Desulfitobacterium, but also provided insights into novel and yet uncultured microorganisms found in organohalide respiring consortia. In this paper we look at how ecogenomic studies have aided us to understand the microbial structures and functions in response to environmental stimuli such as the presence of chlorinated pollutants.

  19. Combining Push Pull Tracer Tests and Microbial DNA and mRNA Analysis to Assess In-Situ Groundwater Nitrate Transformations

    Science.gov (United States)

    Henson, W.; Graham, W. D.; Huang, L.; Ogram, A.

    2015-12-01

    Nitrogen transformation mechanisms in the Upper Floridan Aquifer (UFA) are still poorly understood because of karst aquifer complexity and spatiotemporal variability in nitrate and carbon loading. Transformation rates have not been directly measured in the aquifer. This study quantifies nitrate-nitrogen transformation potential in the UFA using single well push-pull tracer injection (PPT) experiments combined with microbial characterization of extracted water via qPCR and RT-qPCR of selected nitrate reduction genes. Tracer tests with chloride and nitrate ± carbon were executed in two wells representing anoxic and oxic geochemical end members in a spring groundwater contributing area. A significant increase in number of microbes with carbon addition suggests stimulated growth. Increases in the activities of denitrification genes (nirK and nirS) as measured by RT-qPCR were not observed. However, only microbes suspended in the tracer were obtained, ignoring effects of aquifer material biofilms. Increases in nrfA mRNA and ammonia concentrations were observed, supporting Dissimilatory Reduction of Nitrate to Ammonia (DNRA) as a reduction mechanism. In the oxic aquifer, zero order nitrate loss rates ranged from 32 to 89 nmol /L*hr with no added carbon and 90 to 240 nmol /L*hr with carbon. In the anoxic aquifer, rates ranged from 18 to 95 nmol /L*hr with no added carbon and 34 to 207 nmol /L*hr with carbon. These loss rates are low; 13 orders of magnitude less than the loads applied in the contributing area each year, however they do indicate that losses can occur in oxic and anoxic aquifers with and without carbon. These rates may include, ammonia adsorption, uptake, or denitrification in aquifer material biofilms. Rates with and without carbon addition for both aquifers were similar, suggesting aquifer redox state and carbon availability alone are insufficient to predict response to nutrient additions without characterization of microbial response. Surprisingly, these

  20. The key microorganisms for anaerobic degradation of pentachlorophenol in paddy soil as revealed by stable isotope probing

    International Nuclear Information System (INIS)

    Highlights: • SIP suggested that Dechloromonas can mineralize PCP in soil. • Methanosaeta and Methanocella acquired PCP-derived carbon. • Lactate enhanced microbial degradation of PCP in soil. - Abstract: Pentachlorophenol (PCP) is a common residual persistent pesticide in paddy soil and has resulted in harmful effect on soil ecosystem. The anaerobic microbial transformation of PCP, therefore, has been received much attentions, especially the functional microbial communities for the reductive transformation. However, the key functional microorganisms for PCP mineralization in the paddy soil still remain unknown. In this work, DNA-based stable isotope probing (SIP) was applied to explore the key microorganisms responsible for PCP mineralization in paddy soil. The SIP results indicated that the dominant bacteria responsible for PCP biodegradation belonged to the genus Dechloromonas of the class β-Proteobacteria. In addition, the increased production of 13CH4 and 13CO2 indicated that the addition of lactate enhanced the rate of biodegradation and mineralization of PCP. Two archaea classified as the genera of Methanosaeta and Methanocella of class Methanobacteria were enriched in the heavy fraction when with lactate, whereas no archaea was detected in the absence of lactate. These findings provide direct evidence for the species of bacteria and archaea responsible for anaerobic PCP or its breakdown products mineralization and reveal a new insight into the microorganisms linked with PCP degradation in paddy soil

  1. The key microorganisms for anaerobic degradation of pentachlorophenol in paddy soil as revealed by stable isotope probing

    Energy Technology Data Exchange (ETDEWEB)

    Tong, Hui [Guangdong Key Laboratory of Agricultural Environment Pollution Integrated Control, Guangdong Institute of Eco-Environmental and Soil Sciences, Guangzhou 510650 (China); Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou 510640 (China); University of Chinese Academy of Sciences, Beijing 100049 (China); Liu, Chengshuai [State Key Laboratory of Environmental Geochemistry, Institute of Geochemistry, Chinese Academy of Sciences, Guiyang 550009 (China); Li, Fangbai, E-mail: cefbli@soil.gd.cn [Guangdong Key Laboratory of Agricultural Environment Pollution Integrated Control, Guangdong Institute of Eco-Environmental and Soil Sciences, Guangzhou 510650 (China); Luo, Chunling [Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou 510640 (China); Chen, Manjia; Hu, Min [Guangdong Key Laboratory of Agricultural Environment Pollution Integrated Control, Guangdong Institute of Eco-Environmental and Soil Sciences, Guangzhou 510650 (China)

    2015-11-15

    Highlights: • SIP suggested that Dechloromonas can mineralize PCP in soil. • Methanosaeta and Methanocella acquired PCP-derived carbon. • Lactate enhanced microbial degradation of PCP in soil. - Abstract: Pentachlorophenol (PCP) is a common residual persistent pesticide in paddy soil and has resulted in harmful effect on soil ecosystem. The anaerobic microbial transformation of PCP, therefore, has been received much attentions, especially the functional microbial communities for the reductive transformation. However, the key functional microorganisms for PCP mineralization in the paddy soil still remain unknown. In this work, DNA-based stable isotope probing (SIP) was applied to explore the key microorganisms responsible for PCP mineralization in paddy soil. The SIP results indicated that the dominant bacteria responsible for PCP biodegradation belonged to the genus Dechloromonas of the class β-Proteobacteria. In addition, the increased production of {sup 13}CH{sub 4} and {sup 13}CO{sub 2} indicated that the addition of lactate enhanced the rate of biodegradation and mineralization of PCP. Two archaea classified as the genera of Methanosaeta and Methanocella of class Methanobacteria were enriched in the heavy fraction when with lactate, whereas no archaea was detected in the absence of lactate. These findings provide direct evidence for the species of bacteria and archaea responsible for anaerobic PCP or its breakdown products mineralization and reveal a new insight into the microorganisms linked with PCP degradation in paddy soil.

  2. A Continuous Flow Column Study of the Anaerobic Transformation of a CAH Mixture of Tetrachloroethene and Carbon Tetrachloride Using Formate as an Electron Donor

    Science.gov (United States)

    Semprini, L.; Azizian, M. F.; Kim, Y.

    2011-12-01

    Many groundwater sites are contaminated with mixtures of chlorinated aliphatic hydrocarbons (CAHs) that represent a challenge when biological remediation processes are being considered. This is especially challenging when high concentrations of CAHs are present.Trichloromethane (CF), for example, has been observed to inhibit and potentially exert toxicity on reductive dehalogenation of tetrachloroethene (PCE) and trichloroethene (TCE). Results will be presented from a continuous flow column study where the simultaneous transformation of PCE and carbon tetrachloride (CT) was achieved. The column was packed with a quartz sand and bioaugmented with the Evanite Culture (EV) that is capable of transforming PCE to ethene. The column was fed a synthetic groundwater that was amended with PCE to achieve an influent concentration near its solubility limit (0.10 mM) and formate (1.5 mM) that reacts to produce hydrogen as the ultimate electron donor. The column was operated for over 1600 days prior to the addition of CT. During this period PCE was transformed mainly to vinyl chloride (VC) and ethene (ETH) and minor amounts of cis-dichloroethene (cis-DCE) and TCE. The transformation extent achieved based on the column effluent concentrations ranged from about 50% ETH, 30% VC, and 20 cis-DCE up to 80% ETH and 20% VC. When the column was fed sulfate, it was completely transformed via sulfate reduction. Ferrous iron production from ferric iron reduction was observed early in the study. Acetate was also formed as a result of homoacetogenesis from hydrogen utilization. CT addition (0.015 mM) was started at 1600 days while PCE addition was continued. During the first 25 days of CT addition, CT concentrations gradually increased to 50% of the injection concentration and chloromethane (CM) and CF were observed as transformation products. CT concentrations then decreased with over 98% transformation achieved.CM was removed to below the detection limit and CF concentration decreases to

  3. Half saturation constants for nitrate and nitrite by in-sewer anoxic transformations of wastewater organic matter

    DEFF Research Database (Denmark)

    Abdul-Talib, Suhaimi; Hvitved-Jacobsen, Thorkild; Vollertsen, Jes;

    2001-01-01

     significant breakthrough and progress have been made in the study of the kinetics of microbial transformation in sewers under aerobic and under changing aerobic/anaerobic conditions. Fundamental knowledge on anoxic kinetics of wastewater is still lacking, so it is not now possible to apply...... experiments conducted on 7 different wastewater samples were found to be 0.76 gNO3.N/m3 and 0.33 gNO2-N/m3 respectively....

  4. Early-warning process/control for anaerobic digestion and biological nitrogen transformation processes: Batch, semi-continuous, and/or chemostat experiments. Final report

    Energy Technology Data Exchange (ETDEWEB)

    Hickey, R. [Science Applications International Corp., McLean, VA (United States)

    1992-09-01

    The objective of this project was to develop and test an early-warning/process control model for anaerobic sludge digestion (AD). The approach was to use batch and semi-continuously fed systems and to assemble system parameter data on a real-time basis. Specific goals were to produce a real-time early warning control model and computer code, tested for internal and external validity; to determine the minimum rate of data collection for maximum lag time to predict failure with a prescribed accuracy and confidence in the prediction; and to determine and characterize any trends in the real-time data collected in response to particular perturbations to feedstock quality. Trends in the response of trace gases carbon monoxide and hydrogen in batch experiments, were found to depend on toxicant type. For example, these trace gases respond differently for organic substances vs. heavy metals. In both batch and semi-continuously feed experiments, increased organic loading lead to proportionate increases in gas production rates as well as increases in CO and H{sub 2} concentration. An analysis of variance of gas parameters confirmed that CO was the most sensitive indicator variable by virtue of its relatively larger variance compared to the others. The other parameters evaluated including gas production, methane production, hydrogen, carbon monoxide, carbon dioxide and methane concentration. In addition, a relationship was hypothesized between gaseous CO concentration and acetate concentrations in the digester. The data from semicontinuous feed experiments were supportive.

  5. A Multi-omics Approach to Understand the Microbial Transformation of Lignocellulosic Materials in the Digestive System of the Wood-Feeding Beetle Odontotaenius disjunctus

    Science.gov (United States)

    Ceja Navarro, J. A.; Karaoz, U.; White, R. A., III; Lipton, M. S.; Adkins, J.; Mayali, X.; Blackwell, M.; Pett-Ridge, J.; Brodie, E.; Hao, Z.

    2015-12-01

    Odontotaenius disjuctus is a wood feeding beetle that processes large amounts of hardwoods and plays an important role in forest carbon cycling. In its gut, plant material is transformed into simple molecules by sequential processing during passage through the insect's digestive system. In this study, we used multiple 'omics approaches to analyze the distribution of microbial communities and their specific functions in lignocellulose deconstruction within the insect's gut. Fosmid clones were selected and sequenced from a pool of clones based on their expression of plant polymer degrading enzymes, allowing the identification of a wide range of carbohydrate degrading enzymes. Comparison of metagenomes of all gut regions demonstrated the distribution of genes across the beetle gut. Cellulose, starch, and xylan degradation genes were particularly abundant in the midgut and posterior hindgut. Genes involved in hydrogenotrophic production of methane and nitrogenases were more abundant in the anterior hindgut. Assembled contigs were binned into 127 putative genomes representing Bacteria, Archaea, Fungi and Nematodes. Eleven complete genomes were reconstructed allowing to identify linked functions/traits, including organisms with cellulosomes, and a combined potential for cellulose, xylan and starch hydrolysis and nitrogen fixation. A metaproteomic study was conducted to test the expression of the pathways identified in the metagenomic study. Preliminary analyses suggest enrichment of pathways related to hemicellulosic degradation. A complete xylan degradation pathway was reconstructed and GC-MS/MS based metabolomics identified xylobiose and xylose as major metabolite pools. To relate microbial identify to function in the beetle gut, Chip-SIP isotope tracing was conducted with RNA extracted from beetles fed 13C-cellulose. Multiple 13C enriched bacterial groups were detected, mainly in the midgut. Our multi-omics approach has allowed us to characterize the contribution of

  6. Microbial metabolism of Tholin

    Science.gov (United States)

    Stoker, C. R.; Mancinelli, R. L.; Boston, P. J.; Segal, W.; Khare, B. N.

    1990-01-01

    Tholin, a class of complex organic heteropolymers hypothesized to possess wide solar system distribution, is shown to furnish the carbon and energy requirements of a wide variety of common soil bacteria which encompasses aerobic, anaerobic, and facultatively anaerobic bacteria. Some of these bacteria are able to derive not merely their carbon but also their nitrogen requirements from tholin. The palatability of tholins to modern microbes is speculated to have implications for the early evolution of microbial life on earth; tholins may have formed the base of the food chain for an early heterotrophic biosphere, prior to the evolution of autotrophy on the early earth.

  7. Effect of compaction on microbial activity and carbon and nitrogen transformations in two oxisols with different mineralogy

    Directory of Open Access Journals (Sweden)

    Sérgio Ricardo Silva

    2011-08-01

    Full Text Available The use of machinery in agricultural and forest management activities frequently increases soil compaction, resulting in greater soil density and microporosity, which in turn reduces hydraulic conductivity and O2 and CO2 diffusion rates, among other negative effects. Thus, soil compaction has the potential to affect soil microbial activity and the processes involved in organic matter decomposition and nutrient cycling. This study was carried out under controlled conditions to evaluate the effect of soil compaction on microbial activity and carbon (C and nitrogen (N mineralization. Two Oxisols with different mineralogy were utilized: a clayey oxidic-gibbsitic Typic Acrustox and a clayey kaolinitic Xantic Haplustox (Latossolo Vermelho-Amarelo ácrico - LVA, and Latossolo Amarelo distrófico - LA, respectively, in the Brazil Soil Classification System. Eight treatments (compaction levels were assessed for each soil type in a complete block design, with six repetitions. The experimental unit consisted of PVC rings (height 6 cm, internal diameter 4.55 cm, volume 97.6 cm³. The PVC rings were filled with enough soil mass to reach a final density of 1.05 and 1.10 kg dm-3, respectively, in the LVA and LA. Then the soil samples were wetted (0.20 kg kg-1 = 80 % of field capacity and compacted by a hydraulic press at pressures of 0, 60, 120, 240, 360, 540, 720 and 900 kPa. After soil compression the new bulk density was calculated according to the new volume occupied by the soil. Subsequently each PVC ring was placed within a 1 L plastic pot which was then tightly closed. The soils were incubated under aerobic conditions for 35 days and the basal respiration rate (CO2-C production was estimated in the last two weeks. After the incubation period, the following soil chemical and microbiological properties were detremined: soil microbial biomass C (C MIC, total soil organic C (TOC, total N, and mineral N (NH4+-N and NO3--N. After that, mineral N, organic N

  8. Anaerobic Digestion: Process

    DEFF Research Database (Denmark)

    Angelidaki, Irini; Batstone, Damien J.

    2011-01-01

    Organic waste may degrade anaerobically in nature as well as in engineered systems. The latter is called anaerobic digestion or biogasification. Anaerobic digestion produces two main outputs: An energy-rich gas called biogas and an effluent. The effluent, which may be a solid as well as liquid with...... very little dry matter may also be called a digest. The digest should not be termed compost unless it specifically has been composted in an aerated step. This chapter describes the basic processes of anaerobic digestion. Chapter 9.5 describes the anaerobic treatment technologies, and Chapter 9.......6 addresses the mass balances and environmental aspects of anaerobic digestion....

  9. Proceedings of the 10. world congress on anaerobic digestion 2004 : anaerobic bioconversion, answer for sustainability

    International Nuclear Information System (INIS)

    This conference reviewed the broad scope of anaerobic process-related activities taking place globally and confirmed the possibilities of using anaerobic processes to add value to industrial wastewaters, municipal solid wastes and organic wastes while minimizing pollution and greenhouse gases. It focused on biomolecular tools, instrumentation of anaerobic digestion processes, anaerobic bioremediation of chlorinated organics, and thermophilic and mesophilic digestion. Several papers focused on the feasibility of using waste products to produce hydrogen and methane for electricity generation. The sessions of the conference were entitled acidogenesis; microbial ecology; process control; sulfur content; technical development; domestic wastewater; agricultural waste; organic municipal solid wastes; instrumentation; molecular biology; sludges; agricultural feedstock; bioremediation; industrial wastewater; hydrogen production; pretreatments; sustainability; and integrated systems. The conference featured 387 posters and 192 oral presentations, of which 111 have been indexed separately for inclusion in this database. refs., tabs., figs

  10. Anaerobic degradation of linear alkylbenzene sulfonate

    DEFF Research Database (Denmark)

    Mogensen, Anders Skibsted; Haagensen, Frank; Ahring, Birgitte Kiær

    2003-01-01

    increases during anaerobic stabilization due to transformation of easily degradable organic matter. Hence, LAS is regarded as resistant to biodegradation under anaerobic conditions. We present data from a lab-scale semi-continuously stirred tank reactor (CSTR) spiked with linear dodecylbenzene sulfonate (C......% of the added C-12 LAS was bioavailable and 20% was biotransformed when spiking with 100 mg/L of C-12 LAS and a TS concentration of 14.2 mg/L. Enhanced bioavailability of C-12 LAS was obtained in an upflow anaerobic sludge blanket (UASB) reactor inoculated with granular sludge and sewage sludge. Biodegradation......Linear alkylbenzene sulfonate (LAS) found in wastewater is removed in the wastewater treatment facilities by sorption and aerobic biodegradation. The anaerobic digestion of sewage sludge has not been shown to contribute to the removal. The concentration of LAS based on dry matter typically...

  11. [Anaerobic-aerobic infection in acute appendicitis].

    Science.gov (United States)

    Mamchich, V I; Ulitovskiĭ, I V; Savich, E I; Znamenskiĭ, V A; Beliaeva, O A

    1998-01-01

    362 patients with acute appendicitis (AA) were examined. For microbiological diagnosis of aerobic and anaerobic nonclostridial microflora we used complex accelerated methods (including evaluation of gram-negative microorganisms in comparison with tinctorial-fermentative method of differential staining according to oxygen sensitivity of catalasopositive together with aerobic and cathalasonegative anaerobic microorganisms) as well as complete bacteriologic examination with determination of sensitivity of the above microorganism to antimicrobial remedies. High rate of aerobic-anaerobic microbial associations and substantial identity of microflora from appendicis and exudate from abdominal cavity was revealed, which evidenced the leading role of endogenous microorganisms in etiology and pathogenesis of AA and peritonitis i. e. autoinfection. In patients with destructive forms of AA, complicated by peritonitis it is recommended to use the accelerated method of examination of pathologic material as well as the complete scheme of examination with the identification of the isolated microorganisms and the correction of antibiotic treatment. PMID:9511291

  12. Microbial Degradation of Indole and Its Derivatives

    Directory of Open Access Journals (Sweden)

    Pankaj Kumar Arora

    2015-01-01

    Full Text Available Indole and its derivatives, including 3-methylindole and 4-chloroindole, are environmental pollutants that are present worldwide. Microbial degradation of indole and its derivatives can occur in several aerobic and anaerobic pathways; these pathways involve different known and characterized genes. In this minireview, we summarize and explain the microbial degradation of indole, indole-3-acetic acid, 4-chloroindole, and methylindole.

  13. Are microbial N transformation rates in a permanent grassland soil after 17 years of elevated atmospheric CO2 sensitive to soil temperature?

    Science.gov (United States)

    Moser, Gerald; Gorenflo, André; Brenzinger, Kristof; Clough, Tim; Braker, Gesche; Müller, Christoph

    2016-04-01

    Long-term observations (17 years) within the Giessen Free Air Carbon dioxide Enrichment (Giessen FACE) study on permanent grassland showed that the carbon fertilization caused significant changes in the ecosystem nitrogen cycle. These changes are responsible for a doubling of annual N2O emissions under elevated atmospheric CO2 (eCO2) caused by increased emissions during the plant growing season. The goal of this lab study was to understand how soil temperature influences the long-term effects of eCO2 and plant carbon input on microbial N transformations in the Giessen FACE. Therefore, a pulse labelling study with 15N tracing of 15NH4+ and 15NO3‑ was carried out with incubated soil samples from elevated and ambient CO2 FACE rings in climate chambers at two different temperatures (10°C and 19°C), while water filled pore space of the samples was adjusted to the same level. The various N pools in the soil (NH4+, NO3‑, NO2‑, soil organic matter), N2O emissions and simultaneous gross N transformation rates were quantified. The quantification of the gross N transformations are based on the turnover of 15NH4+, 15NO3‑, 15NO2‑ and shall illuminate the interaction between carbon fertilization, temperature and changes in nitrogen cycle in this grassland soil. While the soil respiration after labelling was significantly increased at 19°C compared to 10°C, N2O emissions showed no significant differences. There were also no significant differences of N2O emissions between soil samples from control and elevated CO2 rings within each temperature level. As the soil temperature (within the range of 10-19°C) had no significant effects on N transformations responsible for the observed doubling of N2O emissions under eCO2, it seems most likely that other factors like direct carbon input by plants and/or soil moisture differences between ambient and elevated rings in the field are responsible for the observed increase in N2O emissions under eCO2.

  14. Alternating Current Influences Anaerobic Electroactive Biofilm Activity.

    Science.gov (United States)

    Wang, Xin; Zhou, Lean; Lu, Lu; Lobo, Fernanda Leite; Li, Nan; Wang, Heming; Park, Jaedo; Ren, Zhiyong Jason

    2016-09-01

    Alternating current (AC) is known to inactivate microbial growth in suspension, but how AC influences anaerobic biofilm activities has not been systematically investigated. Using a Geobacter dominated anaerobic biofilm growing on the electrodes of microbial electrochemical reactors, we found that high frequency AC ranging from 1 MHz to 1 kHz (amplitude of 5 V, 30 min) showed only temporary inhibition to the biofilm activity. However, lower frequency (100 Hz, 1.2 or 5 V) treatment led to 47 ± 19% permanent decrease in limiting current on the same biofilm, which is attributed to the action of electrohydrodynamic force that caused biofilm damage and loss of intercellular electron transfer network. Confocal microscopy images show such inactivation mainly occurred at the interface between the biofilm and the electrode. Reducing the frequency further to 1 Hz led to water electrolysis, which generated gas bubbles that flushed all attached cells out of the electrode. These findings provide new references on understanding and regulating biofilm growth, which has broader implications in biofouling control, anaerobic waste treatment, energy and product recovery, and general understanding of microbial ecology and physiology. PMID:27485403

  15. Growth and Methane Oxidation Rates of Anaerobic Methanotrophic Archaea in a Continuous-Flow Bioreactor

    OpenAIRE

    Peter R. Girguis; Orphan, Victoria J; Hallam, Steven J.; DeLong, Edward F

    2003-01-01

    Anaerobic methanotrophic archaea have recently been identified in anoxic marine sediments, but have not yet been recovered in pure culture. Physiological studies on freshly collected samples containing archaea and their sulfate-reducing syntrophic partners have been conducted, but sample availability and viability can limit the scope of these experiments. To better study microbial anaerobic methane oxidation, we developed a novel continuous-flow anaerobic methane incubation system (AMIS) that...

  16. Review of inorganic nitrogen transformations and effect of global climate change on inorganic nitrogen cycling in ocean ecosystems

    Science.gov (United States)

    Kim, Haryun

    2016-03-01

    Inorganic N transformations (nitrification, anaerobic ammonium oxidation, denitrification, and dissimilatory nitrate reduction to ammonium) are regulated by various biogeochemical factors linked either by the supply of electron acceptors and donors or by competition for electron acceptors. This review considers both the microbial community related to each process and the technical methods used to measure each process rate. With this background knowledge, this article summarizes how global climate change through increased pCO2, ocean acidification, deoxygenation and anthropogenic N deposition will alter oceanic N cycling, and finally emphasizes the need for comprehensive research on inorganic N transformation in marine ecosystems.

  17. 养分投入和作物根系对土壤微生物氮转化的影响%Impact of Fertilization and Crop Roots on Microbial Nitrogen Transformation

    Institute of Scientific and Technical Information of China (English)

    左竹; 张建峰; 李桂花

    2011-01-01

    Soil microorganisms are the main body for N transformation. Soil organic matter and rhizodeposits are driven forces for microbial N transformation. The objective of this review was to address the effect of fertilizer input or organic matter amendments on nitrogen transformation aroused by soil microorganisms. We found that fertilizer input or organic matter amendments had an effect on soil N transformation through indirect affecting photosynthates translocation and mineralization of labile organic matter, or directly providing solute for microorganisms. As a result, fertilizer input and organic matter amendments impacted microbial biomass, community structure, abundances of genes involved in nitrogen transformations or microbial produced enzymes. Crop roots affected microbial number and activity through rhizodeposits or residue return. Microorganisms mineralized soil organic mater or organic inputs according to their needs for C, N or energy. So soil organic mater content significantly affected microbial nitrogen transformation except for organic matter amendments. In conclusion, fertilization had direct/indirect effects on soil microorganism, accordingly had an effect on soil nitrogen forms, and consequently had an effect on crop N uptake.%土壤氮转化的主体是微生物,土壤有机质与根系分泌物是微生物氮转化的驱动力.综述了养分投入和作物根系通过微生物对土壤氮转化的影响.指出化肥或有机肥的投入,通过改变光合产物向根系的分配和土壤难/易有机质的数量,或直接提供微生物底物方式,改变微生物生物量、群落结构、氮转化功能基因的数量或相关酶的产生,从而影响土壤氮的转化;还指出根系通过根系分泌物或根茬还田影响土壤微生物的数量和活性,土壤有机质含量也显著影响微生物氮转化过程.总之,养分投入通过直接或间接方式影响土壤微生物,进而影响土壤养分的存在状态,最终影响作物对养分的吸收.

  18. Thermodynamic and kinetic control on anaerobic oxidation of methane in marine sediments

    DEFF Research Database (Denmark)

    Knab, Nina J.; Dale, Andrew W.; Lettmann, Karsten;

    2008-01-01

    The free energy yield of microbial respiration reactions in anaerobic marine sediments must be sufficient to be conserved as biologically usable energy in the form of ATP. Anaerobic oxidation of methane (AOM) coupled to sulfate reduction (SRR) has a very low standard free energy yield of ΔG  = -3...

  19. Transformation and sorption of fipronil in urban stream sediments.

    Science.gov (United States)

    Lin, Kunde; Haver, Darren; Oki, Lorence; Gan, Jay

    2008-09-24

    Fipronil is an urban-use insecticide, and the increased use has led to its frequent detections in urban streams. Most studies on the environmental fate of fipronil so far have focused on soils, and little is known about its behavior in sediment-water systems. In this study, we investigated the transformation and sorption of fipronil in urban stream sediments from California, incubated under facultative and anaerobic conditions. Degradation of fipronil in sediments generally followed exponential decay kinetics, and the first-order half-lives of fipronil were only 4.6-18.5 days in anaerobic sediments. The persistence of fipronil under facultative conditions was considerably longer, with half-lives from 25 to 91 days. Sterilization generally decreased the dissipation of fipronil, indicating that microbial activity was an important factor in fipronil transformations in sediments. Under facultative conditions, fipronil sulfide and sulfone were observed, while only fipronil sulfide was detected in anaerobic samples. The sorption coefficient K d consistently increased with organic carbon contents of sediments. In the same sediment, K d usually also increased with contact time, suggesting decreased availability for aged residues. Results from this study showed that the stability of fipronil in sediments depends closely on the oxygen status and that due to the readily conversion of fipronil to the sulfone and sulfide metabolites, the overall risk assessment of fipronil in surface aquatic systems should take into consideration fipronil as well as its metabolites. PMID:18729374

  20. Gender comparisons in anaerobic power and anaerobic capacity tests.

    OpenAIRE

    Maud, P. J.; Shultz, B B

    1986-01-01

    The purpose of the study was to compare anaerobic power and anaerobic capacity test scores between young active men and women. Three performance measures of anaerobic power and two of anaerobic capacity were administered to a sample comprising 52 male and 50 female college students (means age = 21.4 yrs). Results indicated significant differences between men and women in body height, weight and per cent fat, in fat free mass (FFM), anaerobic power, and anaerobic capacity when recorded as gros...

  1. Process of nitrogen transformation and microbial community structure in the Fe(0)-carbon-based bio-carrier filled in biological aerated filter.

    Science.gov (United States)

    Deng, Shihai; Li, Desheng; Yang, Xue; Zhu, Shanbin; Li, Jinlong

    2016-04-01

    Nitrogen pollutants in low-organic carbon wastewater are difficult to biodegrade. Therefore, the Fe(0)-carbon-based bio-carrier (FCBC) was firstly used as hydrogen producer in a biological-aerated filter (BAF) to make up for the lack of organic carbon in biological nitrogen removal. Physical and chemical properties of FCBC were detected and compared in this study. The nitrogen removal rate for low COD/TN ratio wastewater, nitrogen transformation process, and microbial communities in the FCBC filled in BAF were investigated. Results showed that the nitrogen removal rates was 0.38-0.41 kg N m(-3) day(-1) in the FCBC filled BAF and reached 0.62 kg N m(-3) day(-1) within the filter depth of 60-80 cm, under the conditions of the dissolved oxygen 3.5 ± 0.2 mg L(-1) and the inlet pH 7.2 ± 0.1. Hydrogenophaga (using hydrogen as electron donor), Sphaerotilus (absorbing [Fe(3+)]), Nitrospira (nitrificaion), and Nitrosomonas (ammonia oxidation) were found to be the predominant genera in the reactor. The reaction schemes in the FCBC filled in BAF was calculated: hydrogen and [Fe(3+)] were produced by Fe(0)-C galvanic cells in the FCBC, ammonia was oxidized into nitrate by Nitrosomonas and Nitrospira genera, hydrogen was used as electron donors by Hydrogenophaga genus to reduce nitrate into N2, and [Fe(3+)] was partly absorbed by Sphaerotilus and diverted via sludge discharging. PMID:26638971

  2. The Ability of Microbial Community of Lake Baikal Bottom Sediments Associated with Gas Discharge to Carry Out the Transformation of Organic Matter under Thermobaric Conditions

    Science.gov (United States)

    Bukin, Sergei V.; Pavlova, Olga N.; Manakov, Andrei Y.; Kostyreva, Elena A.; Chernitsyna, Svetlana M.; Mamaeva, Elena V.; Pogodaeva, Tatyana V.; Zemskaya, Tamara I.

    2016-01-01

    The ability to compare the composition and metabolic potential of microbial communities inhabiting the subsurface sediment in geographically distinct locations is one of the keys to understanding the evolution and function of the subsurface biosphere. Prospective areas for study of the subsurface biosphere are the sites of hydrocarbon discharges on the bottom of the Lake Baikal rift, where ascending fluxes of gas-saturated fluids and oil from deep layers of bottom sediments seep into near-surface sediment. The samples of surface sediments collected in the area of the Posolskaya Bank methane seep were cultured for 17 months under thermobaric conditions (80°C, 5 MPa) with the addition of complementary organic substrate, and a different composition for the gas phase. After incubation, the presence of intact cells of microorganisms, organic matter transformation and the formation of oil biomarkers was confirmed in the samples, with the addition of Baikal diatom alga Synedra acus detritus, and gas mixture CH4:H2:CO2. Taxonomic assignment of the 16S rRNA sequence data indicates that the predominant sequences in the enrichment were Sphingomonas (55.3%), Solirubrobacter (27.5%) and Arthrobacter (16.6%). At the same time, in heat-killed sediment and in sediment without any additional substrates, which were cultivated in a CH4 atmosphere, no geochemical changes were detected, nor the presence of intact cells and 16S rRNA sequences of Bacteria and Archaea. This data may suggest that the decomposition of organic matter under culturing conditions could be performed by microorganisms from low-temperature sediment layers. One possible explanation of this phenomenon is migration of the representatives of the deep thermophilic community through fault zones in the near surface sediment layers, together with gas-bearing fluids. PMID:27242716

  3. Anaerobic Treatment of Palm Oil Mill Effluent in Pilot-Scale Anaerobic EGSB Reactor.

    Science.gov (United States)

    Wang, Jin; Mahmood, Qaisar; Qiu, Jiang-Ping; Li, Yin-Sheng; Chang, Yoon-Seong; Li, Xu-Dong

    2015-01-01

    Large volumes of untreated palm oil mill effluent (POME) pose threat to aquatic environment due to the presence of very high organic content. The present investigation involved two pilot-scale anaerobic expanded granular sludge bed (EGSB) reactors, continuously operated for 1 year to treat POME. Setting HRT at 9.8 d, the anaerobic EGSB reactors reduced COD from 71179 mg/L to 12341 mg/L and recycled half of sludge by a dissolved air flotation (DAF). The average effluent COD was 3587 mg/L with the consistent COD removal efficiency of 94.89%. Adding cationic polymer (PAM) dose of 30 mg/L to DAF unit and recycling its half of sludge caused granulation of anaerobic sludge. Bacilli and small coccid bacteria were the dominant microbial species of the reactor. The reactor produced 27.65 m(3) of biogas per m(3) of POME which was utilized for electricity generation. PMID:26167485

  4. Microbial remediation of explosive waste.

    Science.gov (United States)

    Singh, Baljinder; Kaur, Jagdeep; Singh, Kashmir

    2012-05-01

    Explosives are synthesized globally mainly for military munitions. Nitrate esters, such as GTN and PETN, nitroaromatics like TNP and TNT and nitramines with RDX, HMX and CL20, are the main class of explosives used. Their use has resulted in severe contamination of environment and strategies are now being developed to clean these substances in an economical and eco-friendly manner. The incredible versatility inherited in microbes has rendered these explosives as a part of the biogeochemical cycle. Several microbes catalyze mineralization and/or nonspecific transformation of explosive waste either by aerobic or anaerobic processes. It is likely that ongoing genetic adaptation, with the recruitment of silent sequences into functional catabolic routes and evolution of substrate range by mutations in structural genes, will further enhance the catabolic potential of bacteria toward explosives and ultimately contribute to cleansing the environment of these toxic and recalcitrant chemicals. This review summarizes information on the biodegradation and biotransformation pathways of several important explosives. Isolation, characterization, utilization and manipulation of the major detoxifying enzymes and the molecular basis of degradation are also discussed. This may be useful in developing safer and economic microbiological methods for clean up of soil and water contaminated with such compounds. The necessity of further investigations concerning the microbial metabolism of these substances is also discussed. PMID:22497284

  5. A humic substance analogue AQDS stimulates Geobacter sp. abundance and enhances pentachlorophenol transformation in a paddy soil.

    Science.gov (United States)

    Chen, Manjia; Tong, Hui; Liu, Chengshuai; Chen, Dandan; Li, Fangbai; Qiao, Jiangtao

    2016-10-01

    Soil humic substances can be used as redox mediators in accelerating the biotransformation of organic pollutants, and humus-respiring bacteria are widely distributed in soils. However, the impact of humic substances on the soil microbial community during the biotransformation of organic pollutants is expected to be crucial while remains to be unclear. In this study, the biostimulation of indigenous microbial communities and the consequent effects on anaerobic transformation of pentachlorophenol (PCP) by a model humic substance, anthraquinone-2,6-disulfonate (AQDS), were systematically investigated in a paddy soil. The addition of AQDS was observed to increase the production of HCl-extractable Fe(II) and enhance the PCP transformation rates consequently. The pseudo-first-order rate constants of the PCP transformation showed a positive exponential relationship with the AQDS dosage. The terminal restriction fragment length polymorphism (T-RFLP) results indicated the substantial effect of added AQDS on soil microbial community. The enhanced abundance of Geobacter sp. was disclosed to be most critical for accelerated PCP transformation when with AQDS, in which Geobacter sp. functioned for promoting the generation of active Fe(II) and consequently enhancing the PCP transformation rates. The transformation rates of PCP were exponentially correlated with the abundance of Geobacter sp. positively. The findings are expected to improve the understanding of diversity and ubiquity of microorganisms in humic substances-rich soils for accelerating the transformations of soil chlorinated pollutants. PMID:27372263

  6. Perspectives for anaerobic digestion

    DEFF Research Database (Denmark)

    Ahring, Birgitte Kiær

    2003-01-01

    to the soil. Anaerobic digestion (AD) is one way of achieving this goal and it will furthermore, reduce energy consumption or may even be net energy producing. This chapter aims at provide a basic understanding of the world in which anaerobic digestion is operating today. The newest process developments...

  7. Anaerobic sludge granulation

    NARCIS (Netherlands)

    Hulshoff Pol, L.W.; Castro Lopes, de S.I.; Lettinga, G.; Lens, P.N.L.

    2004-01-01

    This paper reviews different theories on anaerobic sludge granulation in UASB-reactors that have been proposed during the past two decades
    This paper reviews different theories on anaerobic sludge granulation in UASB-reactors that have been proposed during the past two decades. The initial stage

  8. Diversity and ecophysiological features of thermophilic carboxydotrophic anaerobes

    NARCIS (Netherlands)

    Sokolova, T.G.; Henstra, A.M.; Sipma, J.; Parshina, S.N.; Stams, A.J.M.; Lebedinsky, A.V.

    2009-01-01

    Both natural and anthropogenic hot environments contain appreciable levels of carbon monoxide (CO). Anaerobic microbial communities play an important role in CO conversion in such environments. CO is involved in a number of redox reactions. It is biotransformed by thermophilic methanogens, acetogens

  9. Biotransformation potential of 6:2 fluorotelomer sulfonate (6:2 FTSA) in aerobic and anaerobic sediment.

    Science.gov (United States)

    Zhang, Shu; Lu, Xiaoxia; Wang, Ning; Buck, Robert C

    2016-07-01

    Aqueous film-forming foam (AFFF) products are used in industrial and military firefighting around the globe. These products contain fluoroalkylthioamido sulfonates, fluoroalkylthiobetaine, and other related substances as the major ingredients, which can be biotransformed in the environment to form 6:2 fluorotelomer sulfonate (6:2 FTSA, F(CF2)6CH2CH2SO3-) as one of the major initial biotransformation products. Limited information is available on 6:2 FTSA aerobic biotransformation in activated sludge and pure microbial culture. This is the first study to report 6:2 FTSA biotransformation in aerobic and anaerobic sediment. 6:2 FTSA was rapidly biotransformed in aerobic river sediment with a half-life less than 5 d. Major stable transformation products observed after 90 d included 5:3 Acid [F(CF2)5CH2CH2COOH), 16 mol%), PFPeA [F(CF2)4COOH, 21 mol%] and PFHxA (F(CF2)5COOH, 20 mol%). 6:2 fluorotelomer alcohol [6:2 FTOH, F(CF2)6CH2CH2OH] was readily biotransfomed whereas 6:2 FTSA biotransformation did not occur in anaerobic sediment over 100 d, indicating that the enzymatic desulfonation step limited 6:2 FTSA biotransformation in anaerobic sediment. These results suggest that 6:2 FTSA related products, after release to the aerobic environment, is likely to biodegrade forming 5:3 Acid, PFPeA and PFHxA. This study also indicates that 6:2 FTSA formed from its aforementioned precursors may be persistent in the anaerobic environment after their potential release. This work provides insight to understanding the fate and environmental loading of AFFF-related products and their major transformation products in the environment. PMID:27058914

  10. Quantifying electron fluxes in methanogenic microbial communities

    OpenAIRE

    Junicke, H.

    2015-01-01

    Anaerobic digestion is a widely applied process in which close interactions between different microbial groups result in the formation of renewable energy in the form of biogas. Nevertheless, the regulatory mechanisms of the electron transfer between acetogenic bacteria and methanogenic archaea in the final steps of the anaerobic digestion process are not fully understood. The electron flux of each syntrophic partner is defined as the product of the biomass-specific electron transfer rate and...

  11. Hydrogen Biogeochemistry in Anaerobic and Photosynthetic Ecosystems

    Science.gov (United States)

    Hoehler, Tori M.; DeVincenzi, Donald L. (Technical Monitor)

    2000-01-01

    The simple biochemistry of molecular hydrogen is central to a large number of microbial processes, affecting the interaction of organisms with each other and with the environment. In anoxic sediments, a great majority of microbial redox processes involve hydrogen as a reactant, product or potential by-product. Accordingly, the energetics (thermodynamics) of each of these processes is affected by variations in local H2 concentrations. It has long been established that this effect is important in governing microbe-microbe interactions and there are multiple demonstrations that "interspecies hydrogen transfer" can alter the products of, inhibit/stimulate, or even reverse microbial metabolic reactions. In anoxic sediments, H2 concentrations themselves are thought to be controlled by the thermodynamics of the predominant H2-consuming microbial process. In sediments from Cape Lookout Bight, this relationship quantitatively describes the co-variation of H2 concentrations with temperature (for methanogens and sulfate reducers) and with sulfate concentration (for sulfate reducers). The quantitative aspect is import= for two reasons: 1) it permits the modeling of H2-sensitive biogeochemistry, such as anaerobic methane oxidation or pathways of organic matter remineralization, as a function of environmental controls; 2) for such a relationship to be observed requires that intracellular biochemistry and bioenergetics are being directly expressed in a component of the extracellular medium. H2 could therefore be utilized a non-invasive probe of cellular energetic function in intact microbial ecosystems. Based on the latter principle we have measured down-core profiles of H2 and other relevant physico-chemical parameters in order to calculate the metabolic energy yields (DG) that support microbial metabolism in Cape Lookout Bight sediments. Methanogens in this system apparently function with energy yields significantly smaller than the minimum requirements suggested by pure

  12. Ocean microbial metagenomics

    Science.gov (United States)

    Kerkhof, Lee J.; Goodman, Robert M.

    2009-09-01

    Technology for accessing the genomic DNA of microorganisms, directly from environmental samples without prior cultivation, has opened new vistas to understanding microbial diversity and functions. Especially as applied to soils and the oceans, environments on Earth where microbial diversity is vast, metagenomics and its emergent approaches have the power to transform rapidly our understanding of environmental microbiology. Here we explore select recent applications of the metagenomic suite to ocean microbiology.

  13. Spatial Abundance and Distribution of Potential Microbes and Functional Genes Associated with Anaerobic Mineralization of Pentachlorophenol in a Cylindrical Reactor

    Science.gov (United States)

    Li, Zhi-Ling; Nan, Jun; Huang, Cong; Liang, Bin; Liu, Wen-Zong; Cheng, Hao-Yi; Zhang, Chunfang; Zhang, Dongdong; Kong, Deyong; Kanamaru, Kyoko; Kobayashi, Tetsuo; Wang, Ai-Jie; Katayama, Arata

    2016-01-01

    Functional interplays of microbial activity, genetic diversity and contaminant transformation are poorly understood in reactors for mineralizing halogenated aromatics anaerobically. Here, we investigated abundance and distribution of potential microbes and functional genes associated with pentachlorophenol (PCP) anaerobic mineralization in a continuous-flow cylindrical reactor (15 cm in length). PCP dechlorination and the metabolite (phenol) were observed at segments 0-8 cm from inlet, where key microbes, including potential reductive dechlorinators (Dehalobacter, Sulfurospirillum, Desulfitobacterium and Desulfovibrio spp.) and phenol degraders (Cryptanaerobacter and Syntrophus spp.), as well as putative functional genes, including putative chlorophenol reductive dehalogenase (cprA) and benzoyl-CoA reductase (bamB), were highly enriched simultaneously. Five types of putative cprAs, three types of putative bamBs and seven types of putative nitrogenase reductase (nifHs) were determined, with their copy numbers decreased gradually from inlet to outlet. Distribution of chemicals, bacteria and putative genes confirmed PCP dechlorination and phenol degradation accomplished in segments 0-5 cm and 0-8 cm, respectively, contributing to a high PCP mineralization rate of 3.86 μM d-1. Through long-term incubation, dechlorination, phenol degradation and nitrogen fixation bacteria coexisted and functioned simultaneously near inlet (0-8 cm), verified the feasibility of anaerobic mineralization of halogenated aromatics in the compact reactor containing multiple functional microbes.

  14. Spatial Abundance and Distribution of Potential Microbes and Functional Genes Associated with Anaerobic Mineralization of Pentachlorophenol in a Cylindrical Reactor

    Science.gov (United States)

    Li, Zhi-Ling; Nan, Jun; Huang, Cong; Liang, Bin; Liu, Wen-Zong; Cheng, Hao-Yi; Zhang, Chunfang; Zhang, Dongdong; Kong, Deyong; Kanamaru, Kyoko; Kobayashi, Tetsuo; Wang, Ai-Jie; Katayama, Arata

    2016-01-01

    Functional interplays of microbial activity, genetic diversity and contaminant transformation are poorly understood in reactors for mineralizing halogenated aromatics anaerobically. Here, we investigated abundance and distribution of potential microbes and functional genes associated with pentachlorophenol (PCP) anaerobic mineralization in a continuous-flow cylindrical reactor (15 cm in length). PCP dechlorination and the metabolite (phenol) were observed at segments 0–8 cm from inlet, where key microbes, including potential reductive dechlorinators (Dehalobacter, Sulfurospirillum, Desulfitobacterium and Desulfovibrio spp.) and phenol degraders (Cryptanaerobacter and Syntrophus spp.), as well as putative functional genes, including putative chlorophenol reductive dehalogenase (cprA) and benzoyl-CoA reductase (bamB), were highly enriched simultaneously. Five types of putative cprAs, three types of putative bamBs and seven types of putative nitrogenase reductase (nifHs) were determined, with their copy numbers decreased gradually from inlet to outlet. Distribution of chemicals, bacteria and putative genes confirmed PCP dechlorination and phenol degradation accomplished in segments 0–5 cm and 0–8 cm, respectively, contributing to a high PCP mineralization rate of 3.86 μM d−1. Through long-term incubation, dechlorination, phenol degradation and nitrogen fixation bacteria coexisted and functioned simultaneously near inlet (0–8 cm), verified the feasibility of anaerobic mineralization of halogenated aromatics in the compact reactor containing multiple functional microbes. PMID:26750760

  15. Soil microbial activities and solid-state 13 CNMR to asses organic matter transformation in a reed-bed under cheese-dairy farm effluents

    International Nuclear Information System (INIS)

    In this study, we described the soil microbial activities involved in a small dairy effluent purification using a reed filter under a Mediterranean climate. We tested whether certain enzyme activities used as bio indicators of dairy waste degradation (β-galactosidase and protease), vary through time which might influence organic matter degradation and to test whether specific microbial communities were selected at the contact of the effluent using community level catabolic profiles (CLCPs). (Author)

  16. Anaerobic Digestion and its Applications

    Science.gov (United States)

    Anaerobic digestion is a natural biological process. The initials "AD" may refer to the process of anaerobic digestion, or the built systems of anaerobic digesters. While there are many kinds of digesters, the biology is basically the same for all. Anaerobic digesters are built...

  17. Comparison of Aerobic and Anaerobic Biodegradation of Sugarcane Vinasse.

    Science.gov (United States)

    Mota, V T; Araújo, T A; Amaral, M C S

    2015-07-01

    Vinasse is the main liquid waste from ethanol production, and it has a considerable pollution potential. Biological treatment is a promising alternative to reduce its organic load. The aim of this study was to analyze the biodegradation of sugarcane juice vinasse in aerobic and anaerobic conditions. The content of carbohydrates, proteins and volatile fatty acids was evaluated. Vinasse samples showed a high biodegradability (>96.5 %) and low percentage of inert chemical oxygen demand (COD) (<3.2 %) in both aerobic and anaerobic conditions. The rates of substrate utilization were slightly higher in aerobic reactors, but COD stabilization occurred simultaneously in the anaerobic reactors, confirming its suitability for anaerobic digestion. Inert COD in anaerobic conditions was lower than in aerobic conditions. On the other hand, COD from metabolic products in the anaerobic reactors was higher than in the aerobic ones, indicating an increased release of soluble microbial products (SMPs) by anaerobic microorganisms. The results indicated that carbohydrates were satisfactorily degraded and protein-like substances were the major components remaining after biological degradation of vinasse. PMID:25957273

  18. Trace metal speciation and bioavailability in anaerobic digestion: A review.

    Science.gov (United States)

    Thanh, Pham Minh; Ketheesan, Balachandran; Yan, Zhou; Stuckey, David

    2016-01-01

    Trace metals are essential for the growth of anaerobic microorganisms, however, in practice they are often added to anaerobic digesters in excessive amounts, which can lead to inhibition. The concept of bioavailability of metals in anaerobic digestion has been poorly understood in the past, and a lack of deep understanding of the relationship between trace metal speciation and bioavailability can result in ineffective metal dosing strategies for anaerobic digesters. Sequential extraction schemes are useful for fractionating trace metals into their different forms, and metal sulfides can serve as a store and source for trace metals during anaerobic digestion, while natural/synthetic chelating agents (soluble microbial products-SMPs, extracellular polysaccharides-EPS, and EDTA/NTA) are capable of controlling trace metal bioavailability. Nevertheless, more work is needed to: investigate the speciation and bioavailability of Ca, Mg, Mn, W, and Se; compare the bioavailability of different forms of trace metals e.g. carbonates, sulfides, phosphates to different anaerobic trophic groups; determine what factors influence metal sulfide dissolution; investigate whether chelating agents can increase trace metal bioavailability; develop and adapt specialized analytical techniques, and; determine how trace metal dynamics change in an anaerobic membrane bioreactor (AnMBR). PMID:26707985

  19. Assessment of microbial processes on radionuclide mobility in shallow land burial

    International Nuclear Information System (INIS)

    The impact of microbial metabolism of the organic substituents of low level radioactive wastes on radionuclide mobility in disposal sites, the nature of the microbial transformations involved in this metabolism and the effect of the prevailing environmental parameters on the quantities and types of metabolic intermediates accumulated were examined. Since both aerobic and anaerobic periods can occur during trench ecosystem development, oxidation capacities of the microbial community in the presence and absence of oxygen were analyzed. Results of gas studies performed at three commercial low level radioactive waste disposal sites were reviewed. Several deficiencies in available data were determined. Further research needs are suggested. This assessment has demonstrated that the biochemical capabilities expressed within the low level radioactive waste disposal site are common to a wide variety of soil bacteria. Hence, assuming trenches would not be placed in sites with such extreme abiotic conditions that all microbial activity is precluded, the microbial populations needed for colonization and decomposition of the organic waste substances are readily provided from the waste itself and from the soil of existing and any proposed disposal sites. Indeed, considering the ubiquity of occurrence of the microorganisms responsible for waste decomposition and the chemical nature of the organic waste material, long-term prevention of biodecomposition is difficult, if not impossible

  20. In Search of functionality-diversity relationships in anaerobic mixed culture fermentations

    International Nuclear Information System (INIS)

    Based on the work described in this paper we will postulate that in environmental ecosystems with a weak selective pressure no clear relationship exists between the ecosystem functionality and the microbial diversity and microbial composition. In the past years we have been investigating the anaerobic fermentation of glucose, xylose, and glycerol, and mixtures of these substrates in continuously stirred tank reactors (CSTR) inoculated with an activated sludge characterized by a very rich microbial diversity. (Author)

  1. Mechanism, kinetics and microbiology of inhibition caused by long-chain fatty acids in anaerobic digestion of algal biomass

    OpenAIRE

    Ma, Jingwei; Zhao, Quan-Bao; Laurens, Lieve L. M.; Jarvis, Eric E.; Nagle, Nick J.; Chen, Shulin; Frear, Craig S.

    2015-01-01

    Background Oleaginous microalgae contain a high level of lipids, which can be extracted and converted to biofuel. The lipid-extracted residue can then be further utilized through anaerobic digestion to produce biogas. However, long-chain fatty acids (LCFAs) have been identified as the main inhibitory factor on microbial activity of anaerobic consortium. In this study, the mechanism of LCFA inhibition on anaerobic digestion of whole and lipid-extracted algal biomass was investigated with a ran...

  2. Anaerobic Ammonium-Oxidizing (Anammox) Bacteria and Associated Activity in Fixed-Film Biofilters of a Marine Recirculating Aquaculture System†

    OpenAIRE

    Tal, Yossi; Joy E M Watts; Schreier, Harold J.

    2006-01-01

    Microbial communities in the biological filter and waste sludge compartments of a marine recirculating aquaculture system were examined to determine the presence and activity of anaerobic ammonium-oxidizing (anammox) bacteria. Community DNA was extracted from aerobic and anaerobic fixed-film biofilters and the anaerobic sludge waste collection tank and was analyzed by amplifying 16S rRNA genes by PCR using anammox-selective and universal GC-clamped primers. Separation of amplified PCR product...

  3. Insight into the mechanism of carbon steel corrosion under aerobic and anaerobic conditions.

    Science.gov (United States)

    El Mendili, Y; Abdelouas, A; Bardeau, J-F

    2013-06-21

    We particularly focused our study on identifying the corrosion products formed at 30 °C on carbon steel under aerobic and anaerobic conditions and on following their evolution with time due to enhanced microbial activity under environmental and geological conditions. The nature and structural properties of corrosion products were investigated by scanning electron microscopy/energy dispersive X-ray spectroscopy (SEM/EDS), X-ray diffraction (XRD) and confocal micro-Raman spectroscopy. Structural characterisation clearly showed the formation of iron oxides (magnetite and maghemite) under aerobic conditions. Under anaerobic conditions, the first corrosion product formed on the steel surface was nanocrystalline mackinawite, which was then followed by a fast transformation process into the pyrrhotite phase, and the Raman spectrum of monoclinic pyrrhotite was proposed for the first time. Finally, this study also shows that in the context of geological disposal of radioactive waste, the corrosion of carbon steel containers in anoxic and sulphidogenic environments sustained by sulphate-reducing bacteria may not be a problem notably due to the formation of a passive layer on the steel surface. PMID:23652337

  4. Energy positive domestic wastewater treatment: the roles of anaerobic and phototrophic technologies

    KAUST Repository

    Shoener, B. D.

    2014-01-01

    The negative energy balance of wastewater treatment could be reversed if anaerobic technologies were implemented for organic carbon oxidation and phototrophic technologies were utilized for nutrient recovery. To characterize the potential for energy positive wastewater treatment by anaerobic and phototrophic biotechnologies we performed a comprehensive literature review and analysis, focusing on energy production (as kJ per capita per day and as kJ m-3 of wastewater treated), energy consumption, and treatment efficacy. Anaerobic technologies included in this review were the anaerobic baffled reactor (ABR), anaerobic membrane bioreactor (AnMBR), anaerobic fluidized bed reactor (AFB), upflow anaerobic sludge blanket (UASB), anaerobic sequencing batch reactor (ASBR), microbial electrolysis cell (MEC), and microbial fuel cell (MFC). Phototrophic technologies included were the high rate algal pond (HRAP), photobioreactor (PBR), stirred tank reactor, waste stabilization pond (WSP), and algal turf scrubber (ATS). Average energy recovery efficiencies for anaerobic technologies ranged from 1.6% (MFC) to 47.5% (ABR). When including typical percent chemical oxygen demand (COD) removals by each technology, this range would equate to roughly 40-1200 kJ per capita per day or 110-3300 kJ m-3 of treated wastewater. The average bioenergy feedstock production by phototrophic technologies ranged from 1200-4700 kJ per capita per day or 3400-13000 kJ m-3 (exceeding anaerobic technologies and, at times, the energetic content of the influent organic carbon), with usable energy production dependent upon downstream conversion to fuels. Energy consumption analysis showed that energy positive anaerobic wastewater treatment by emerging technologies would require significant reductions of parasitic losses from mechanical mixing and gas sparging. Technology targets and critical barriers for energy-producing technologies are identified, and the role of integrated anaerobic and phototrophic

  5. Energy positive domestic wastewater treatment: the roles of anaerobic and phototrophic technologies.

    Science.gov (United States)

    Shoener, B D; Bradley, I M; Cusick, R D; Guest, J S

    2014-05-01

    The negative energy balance of wastewater treatment could be reversed if anaerobic technologies were implemented for organic carbon oxidation and phototrophic technologies were utilized for nutrient recovery. To characterize the potential for energy positive wastewater treatment by anaerobic and phototrophic biotechnologies we performed a comprehensive literature review and analysis, focusing on energy production (as kJ per capita per day and as kJ m(-3) of wastewater treated), energy consumption, and treatment efficacy. Anaerobic technologies included in this review were the anaerobic baffled reactor (ABR), anaerobic membrane bioreactor (AnMBR), anaerobic fluidized bed reactor (AFB), upflow anaerobic sludge blanket (UASB), anaerobic sequencing batch reactor (ASBR), microbial electrolysis cell (MEC), and microbial fuel cell (MFC). Phototrophic technologies included were the high rate algal pond (HRAP), photobioreactor (PBR), stirred tank reactor, waste stabilization pond (WSP), and algal turf scrubber (ATS). Average energy recovery efficiencies for anaerobic technologies ranged from 1.6% (MFC) to 47.5% (ABR). When including typical percent chemical oxygen demand (COD) removals by each technology, this range would equate to roughly 40-1200 kJ per capita per day or 110-3300 kJ m(-3) of treated wastewater. The average bioenergy feedstock production by phototrophic technologies ranged from 1200-4700 kJ per capita per day or 3400-13 000 kJ m(-3) (exceeding anaerobic technologies and, at times, the energetic content of the influent organic carbon), with usable energy production dependent upon downstream conversion to fuels. Energy consumption analysis showed that energy positive anaerobic wastewater treatment by emerging technologies would require significant reductions of parasitic losses from mechanical mixing and gas sparging. Technology targets and critical barriers for energy-producing technologies are identified, and the role of integrated anaerobic and

  6. Archaean metabolic evolution of microbial mats

    OpenAIRE

    Nisbet, E. G.; Fowler, C. M. R.

    1999-01-01

    Microbial mats of coexisting bacteria and archaea date back to the early Archaean: many of the major steps in early evolution probably took place within them. The earliest mats may have formed as biofilms of cooperative chemolithotrophs in hyperthermophile settings, with microbial exploitation of diversifying niches. Anoxygenic photosynthesis using bacteriochlorophyll could have allowed mats, including green gliding bacteria, to colonize anaerobic shallow-water mesothermophile habitats. Explo...

  7. Combined electrical-alkali pretreatment to increase the anaerobic hydrolysis rate of waste activated sludge during anaerobic digestion

    International Nuclear Information System (INIS)

    Highlights: • Combined electrical-alkali pretreatment for improving sludge anaerobic digestion was proposed. • Combined process enhanced the cell lysis, biopolymers releases, and thus sludge disintegration. • Increased solubilization of sludge increased the anaerobic hydrolysis rate. • Increased solubilization does not always induce an improved anaerobic digestion efficiency. - Abstract: Pretreatment can be used prior to anaerobic digestion to improve the efficiency of waste activated sludge (WAS) digestion. In this study, electrolysis and a commonly used pretreatment method of alkaline (NaOH) solubilization were integrated as a pretreatment method for promoting WAS anaerobic digestion. Pretreatment effectiveness of combined process were investigated in terms of disintegration degree (DDSCOD), suspended solids (TSS and VSS) removals, the releases of protein (PN) and polysaccharide (PS), and subsequent anaerobic digestion as well as dewaterability after digestion. Electrolysis was able to crack the microbial cells trapped in sludge gels and release the biopolymers (PN and PS) due to the cooperation of alkaline solubilization, enhancing the sludge floc disintegration/solubilization, which was confirmed by scanning electron microscopy (SEM) analysis. Biochemical methane potential (BMP) assays showed the highest methane yield was achieved with 5 V plus pH 9.2 pretreatment with up to 20.3% improvement over the non-pretreated sludge after 42 days of mesophilic operation. In contrast, no discernible improvements on anaerobic degradability were observed for the rest of pretreated sludges, probably due to the overmuch leakage of refractory soluble organics, partial chemical mineralization of solubilized compounds and sodium inhibition. The statistical analysis further indicated that increased solubilization induced by electrical-alkali pretreatment increased the first-order anaerobic hydrolysis rate (khyd), but had no, or very slight enhancement on WAS ultimate

  8. Excess of organic carbon in mountain spruce forest soils after bark beetle outbreak altered microbial N transformations and mitigated N-saturation

    Czech Academy of Sciences Publication Activity Database

    Kaňa, Jiří; Tahovská, K.; Kopáček, Jiří; Šantrůčková, H.

    2015-01-01

    Roč. 10, č. 7 (2015), e0134165. E-ISSN 1932-6203 R&D Projects: GA ČR(CZ) GAP504/12/1218 Institutional support: RVO:60077344 Keywords : N-saturation * bark beetle outbreak * soil microbial biomass * nitrification * ammonification * DOC * nitrate Subject RIV: EH - Ecology, Behaviour Impact factor: 3.234, year: 2014

  9. Dynamics of organic matter and microbial populations in amended soil: a multidisciplinary approach

    Science.gov (United States)

    Gigliotti, Giovanni; Pezzolla, Daniela; Zadra, Claudia; Albertini, Emidio; Marconi, Gianpiero; Turchetti, Benedetta; Buzzini, Pietro

    2013-04-01

    The application of organic amendments to soils, such as pig slurry, sewage sludge and compost is considered a tool for improving soil fertility and enhancing C stock. The addition of these different organic materials allows a good supply of nutrients for plants but also contributes to C sequestration, affects the microbial activity and the transformation of soil organic matter (SOM). Moreover, the addition of organic amendment has gained importance as a source of greenhouse gas (GHG) emissions and then as a cause of the "Global Warming". Therefore, it is important to investigate the factors controlling the SOM mineralization in order to improve soil C sequestration and decreasing at the same time the GHG emissions. The quality of organic matter added to the soil will play an important role in these dynamics, affecting the microbial activity and the changes in microbial community structure. A laboratory, multidisciplinary experiment was carried out to test the effect of the amendment by anaerobic digested livestock-derived organic materials on labile organic matter evolution and on dynamics of microbial population, this latter both in terms of consistence of microbial biomass, as well as in terms of microbial biodiversity. Different approaches were used to study the microbial community structure: chemical (CO2 fluxes, WEOC, C-biomass, PLFA), microbiological (microbial enumeration) and molecular (DNA extraction and Roche 454, Next Generation Sequencing, NGS). The application of fresh digestate, derived from the anaerobic treatment of animal wastes, affected the short-term dynamics of microbial community, as reflected by the increase of CO2 emissions immediately after the amendment compared to the control soil. This is probably due to the addition of easily available C added with the digestate, demonstrating that this organic material was only partially stabilized by the anaerobic process. In fact, the digestate contained a high amounts of available C, which led to

  10. Nitrate-transformations during simulated drought on a restored floodplain

    Science.gov (United States)

    Hoagland, B.; Russo, T. A.; Schmidt, C. M.; Tran, D.

    2015-12-01

    Water resources in the California Central Valley face challenges due to recurring drought, aging levee systems, and nitrate contamination. As decisions are made to restore floodplain connectivity, soil microbial metabolic pathways such as denitrification, anaerobic ammonium oxidation (anammox), and dissimilatory nitrate reduction to ammonium (DNRA) transform nitrate under saturated soil conditions and may each affect downstream water quality. However, few studies have quantified the contribution of all three pathways to nitrate retention in freshwater systems, and specifically in restored floodplains. Additionally, no former studies quantify the rates of these microbial nitrate transformations during floods after prolonged periods of drought. To test how flood duration impacts nitrogen cycling we added 15N-enriched tracer to soil mesocosms to measure denitrification, anammox, and DNRA transformation rates. In July 2015, we extracted seven soil mesocosms from the floodplain and riverbed of the Lower Cosumnes River in the San Joaquin Basin of California. Cosumnes River water enriched with 15N-NO3- tracer was pumped into each mesocosm at a constant rate simulating flood durations of 20 h, 30 h, and 96 h. Samples were collected from the surface water, soil pore water, drain water, and sediment for measurements of NO3-, NO2-, NH4+, gas isotopes, and DNA extraction. This study aims to demonstrate the relevance of anammox and DNRA to total nitrate retention and characterize the hydrologic conditions most favorable to each pathway.

  11. Quantifying electron fluxes in methanogenic microbial communities

    NARCIS (Netherlands)

    Junicke, H.

    2015-01-01

    Anaerobic digestion is a widely applied process in which close interactions between different microbial groups result in the formation of renewable energy in the form of biogas. Nevertheless, the regulatory mechanisms of the electron transfer between acetogenic bacteria and methanogenic archaea in t

  12. Transformation products and human metabolites of triclocarban and tricllosan in sewage sludge across the United States

    Science.gov (United States)

    Pycke, Benny F.G.; Roll, Isaac B.; Brownawell, Bruce J.; Kinney, Chad A.; Furlong, Edward T.; Kolpin, Dana W.; Halden, Rolf U.

    2014-01-01

    Removal of triclocarban (TCC) and triclosan (TCS) from wastewater is a function of adsorption, abiotic degradation, and microbial mineralization or transformation, reactions that are not currently controlled or optimized in the pollution control infrastructure of standard wastewater treatment. Here, we report on the levels of eight transformation products, human metabolites, and manufacturing byproducts of TCC and TCS in raw and treated sewage sludge. Two sample sets were studied: samples collected once from 14 wastewater treatment plants (WWTPs) representing nine states, and multiple samples collected from one WWTP monitored for 12 months. Time-course analysis of significant mass fluxes (α = 0.01) indicate that transformation of TCC (dechlorination) and TCS (methylation) occurred during sewage conveyance and treatment. Strong linear correlations were found between TCC and the human metabolite 2′-hydroxy-TCC (r = 0.84), and between the TCC-dechlorination products dichlorocarbanilide (DCC) and monochlorocarbanilide (r = 0.99). Mass ratios of DCC-to-TCC and of methyl-triclosan (MeTCS)-to-TCS, serving as indicators of transformation activity, revealed that transformation was widespread under different treatment regimes across the WWTPs sampled, though the degree of transformation varied significantly among study sites (α = 0.01). The analysis of sludge sampled before and after different unit operation steps (i.e., anaerobic digestion, sludge heat treatment, and sludge drying) yielded insights into the extent and location of TCC and TCS transformation. Results showed anaerobic digestion to be important for MeTCS transformation (37–74%), whereas its contribution to partial TCC dechlorination was limited (0.4–2.1%). This longitudinal and nationwide survey is the first to report the occurrence of transformation products, human metabolites, and manufacturing byproducts of TCC and TCS in sewage sludge.

  13. Atrazine removal in Danish anaerobic aquifers

    DEFF Research Database (Denmark)

    Pedersen, Philip Grinder; Arildskov, N.P.; Albrechtsen, Hans-Jørgen

    process was abiotic since atrazine was also removed from microbially inhibited autoclaved and chloroform amended controls, although in controls amended with mercury, atrazine removal was slowed down. (ring-U-C-14)- atrazine amended samples showed no mineralization to (CO2)-C-14 or transformation to...

  14. Relating BTEX degradation to the biogeochemistry of an anaerobic aquifer

    International Nuclear Information System (INIS)

    Trends in chemical and microbiological parameters in a petroleum hydrocarbon plume within anaerobic groundwater have been studied. Previously, microbial degradation of the hydrocarbon compounds had been substantiated by the use of deuterated hydrocarbons to determine natural (intrinsic) degradation rates within the contaminant plume. Here, sulfate concentration decreases, Eh decreases, and hydrogen sulfide and bicarbonate concentration increases are shown to be associated with the contaminant plume. These trends indicate microbial degradation of the benzene, toluene, ethylbenzene, and xylene (BTEX) compounds by sulfate-reducing bacteria. Stoichiometry indicates that other consortia of bacteria play a role in the degradation of the hydrocarbons. Total microbial cell numbers were higher within the plume than in the uncontaminated groundwater. There is, however, no direct correlation between total microbial cell numbers, and BTEX, sulfate, bicarbonate, and hydrogen sulfide concentrations within the plume

  15. Exploring the Metabolic Potential of Microbial Communities in Ultra-basic Reducing Spring at The Cedars, CA: Evidence of Microbial Methanogenesis and Heterotrophic Acetogenesis

    Science.gov (United States)

    Kohl, L.; Cummings, E.; Cox, A.; Suzuki, S.; Morrrissey, L.; Lang, S. Q.; Richter, A.; Nealson, K. H.; Morrill, P. L.

    2015-12-01

    The Cedars is a complex of ultra-basic, reducing springs located in the Coastal Range Ophiolite (CA, USA), a site of present day serpentinization. Similar to other serpentinization-associated fluids, the groundwaters discharging at The Cedars contain elevated concentrations of C1-C6 alkanes and volatile organic acids (VOAs) which may originate from abiotic or thermogenic processes but can also be produced, consumed, or transformed by microbial activity. In contrast to other continental sites of serpentinization, geochemical indicators (δ13CCH4, δ2HCH4, CH4/C2-C6 alkanes) are consistent with a partial microbial origin of methane at The Cedars. These indicators, however, can provide only indirect evidence of microbial methanogenesis. To further explore the metabolic potential of the indigenous microbial communities at The Cedars, we conducted a series of microcosm experiments in which fluids and sediments collected at The Cedars were incubated with 13C labeled substrates (formate, acetate, bicarbonate, methanol) under anaerobic conditions. 13C from all amended substrates was incorporated into CH4 demonstrating that these microbial communities can convert both organic and inorganic substrates to CH4. The apparent fractionation of 13C between methane and potential substrates indicated that carbonate reduction was the dominant pathway of methanogenesis, and 16S rDNA based community profiling revealed the presence of an OTU closest related to Methanobacterium sp., an autotrophic (CO2/H2) methanogen. Concentrations of C1-C4 VOAs increased 5-fold over the course of the experiment indicating the microbial production of VOAs. This acetogenesis occurred heterotrophically as autotrophic acetogenesis can be excluded because (a) δ13C values of acetate were similar to those of inorganic carbon (inconsistent with the strong discrimination against 13C observed in autotrophic acetogenesis) and (b) no incorporation of 13C from labeled bicarbonate was into acetate was observed.

  16. ANAMMOX process start up and stabilization with an anaerobic seed in Anaerobic Membrane Bioreactor (AnMBR).

    Science.gov (United States)

    Suneethi, S; Joseph, Kurian

    2011-10-01

    ANaerobic AMMonium OXidation (ANAMMOX) process, an advanced biological nitrogen removal alternative to traditional nitrification--denitrification removes ammonia using nitrite as the electron acceptor without oxygen. The feasibility of enriching anammox bacteria from anaerobic seed culture to start up an Anaerobic Membrane Bioreactor (AnMBR) for N-removal is reported in this paper. The Anammox activity was established in the AnMBR with anaerobic digester seed culture from a Sewage Treatment Plant in batch mode with recirculation followed by semi continuous process and continuous modes of operation. The AnMBR performance under varying Nitrogen Loading Rates (NLR) and HRTs is reported for a year, in terms of nitrogen transformations to ammoniacal nitrogen, nitrite and nitrate along with hydrazine and hydroxylamine. Interestingly ANAMMOX process was evident from simultaneous Amm-N and nitrite reduction, consistent nitrate production, hydrazine and hydroxylamine presence, notable organic load reduction and bicarbonate consumption. PMID:21775136

  17. Anaerobic inhibition of trace organic compound removal during rapid infiltration of wastewater.

    OpenAIRE

    Hutchins, S R; Tomson, M B; Wilson, J. T.; Ward, C H

    1984-01-01

    When soil columns were operated aerobically on a flooding-drying schedule in a previous study, good removals were observed for several organic compounds at concentrations ranging from 1 to 1,000 micrograms per liter in primary wastewater. In this study, fractional breakthroughs of most compounds increased substantially once operating parameters were modified and the soil became anaerobic. These results imply that microbial removal of trace organic compounds can be inhibited if anaerobic condi...

  18. Improvement of anaerobic bio-hydrogen gas production from organic sludge waste

    International Nuclear Information System (INIS)

    Microbial hydrogen gas production from organic matters stands out as one of the most promising alternatives for sustainable green energy production. Based on the literature review, investigation of anaerobic bio-hydrogen gas production from organic sludge waste using a mixed culture has been very limited. The objective of this study was to assess the anaerobic bio-hydrogen gas production from organic sludge waste under various conditions. (Author)

  19. Assessment of microbial processes on radionuclide mobility in shallow land burial. [West Valley, NY; Beatty, Nevada; Maxey Flats, Kentucky

    Energy Technology Data Exchange (ETDEWEB)

    Colombo, P.; Tate, R.L. III; Weiss, A.J.

    1982-07-01

    The impact of microbial metabolism of the organic substituents of low level radioactive wastes on radionuclide mobility in disposal sites, the nature of the microbial transformations involved in this metabolism and the effect of the prevailing environmental parameters on the quantities and types of metabolic intermediates accumulated were examined. Since both aerobic and anaerobic periods can occur during trench ecosystem development, oxidation capacities of the microbial community in the presence and absence of oxygen were analyzed. Results of gas studies performed at three commercial low level radioactive waste disposal sites were reviewed. Several deficiencies in available data were determined. Further research needs are suggested. This assessment has demonstrated that the biochemical capabilities expressed within the low level radioactive waste disposal site are common to a wide variety of soil bacteria. Hence, assuming trenches would not be placed in sites with such extreme abiotic conditions that all microbial activity is precluded, the microbial populations needed for colonization and decomposition of the organic waste substances are readily provided from the waste itself and from the soil of existing and any proposed disposal sites. Indeed, considering the ubiquity of occurrence of the microorganisms responsible for waste decomposition and the chemical nature of the organic waste material, long-term prevention of biodecomposition is difficult, if not impossible.

  20. Anaerobic biological treatment

    International Nuclear Information System (INIS)

    The Enso-Fenox process has been very successfully used to remove chlorinated phenolic compounds from pulp bleaching effluents. It is a two-stage anaerobic/aerobic process consisting of a nonmethanogenic anaerobic fluidized bed followed by a trickling filter. Studies have been conducted on reductive dechlorination of chlorinated aromatic compounds under anaerobic conditions with chlorinated phenols as the sole carbon and energy source. Approximately 40% of the added chlorophenols was converted to CH4 and CO2. Substrate loading rates were 20 mg/L/d at hydraulic detention times of 2-4 days with 90% substrate conversion efficiency. Reductive dechlorination of mono, di-, tri-, and pentachlorophenols has been demonstrated in anaerobic sewage sludge. The following constituents were tested in the laboratory at their approximate concentrations in coal conversion wastewater (CCWW) and were anaerobically degraded in serum bottles: 1,000 mg/L phenol; 500 mg/L resorcinol; 1,000 mg/L benzoic acid; 500 mg/L p-cresol; 200 mg/L pyridine; 2,000 mg/L benzoic acid; 250 mg/L 40 methylcatechol; 500 mg/L 4-ethylpyridine; and 2,000 mg/L hexanoic acid. A petrochemical may initially exhibit toxicity to an unacclimated population of methane-fermenting bacteria, but with acclimation the toxicity may be greatly reduced or disappear. In addition, the microorganisms may develop the capacity to actually degrade compounds which showed initial toxicity. Since biomass digestion requires a complete consortium of bacteria, it is relevant to study the effect of a given process as well as to individual steps within the process. A toxicant can inhibit the rate-limiting step and/or change the step that is rate-limiting. Both manifestations of toxicity can severely affect the overall process

  1. Characterization of Spartina alterniflora as feedstock for anaerobic digestion

    International Nuclear Information System (INIS)

    Smooth cordgrass (Spartina alterniflora), a saltmarsh plant with high production, was characterized for its potential for use as feedstock for anaerobic digestion processes. The anaerobic digestibility and biogas yield of S. alterniflora were evaluated by anaerobic batch digestion experiments performed at 35 ± 1 C at initial volatile solids (VS) of 6%. The nutrient content analysis indicated that S. alterniflora contained the required nutrition for anaerobic microorganisms, but its high C/N of 58.8, high K and Na contents of 8.1, 22.7 g kg-1, respectively, may be disadvantageous to its anaerobic digestion. The cumulative biogas yield was determined to be 358 L kg-1 VS and the biodegradation efficiency was 45% after 60 days of digestion. The methane content of biogas increased from 53% on day 3 to around 62% after 13 days of digestion. The changes of volatile fatty acids (VFAs) indicated that the acidification of S. alterniflora was propionate-type fermentation with proportion of acetate and propionate ranging from 54.8% to 98.4%, and the hydrolysis of lignocellulose was the rate-limiting step for its anaerobic digestion. The analysis of cations suggested that K+ and Mg2+, with the maximum concentration of 1.35 and 0.43 g L-1 in fermentation liquor, respectively, could be inhibitory to the anaerobic digestion of S. alterniflora. It is concluded that S. alterniflora can be transformed into clean energy by anaerobic digestion and the high contents of K, Na, Ca and Mg may be the inhibitory factors when S. alterniflora is digested by continuous or semi-continuous anaerobic process. (author)

  2. Dehalorespiration with Polychlorinated Biphenyls by an Anaerobic Ultramicrobacterium▿

    OpenAIRE

    May, Harold D.; Miller, Greg S.; Birthe V. Kjellerup; Sowers, Kevin R.

    2008-01-01

    Anaerobic microbial dechlorination is an important step in the detoxification and elimination of polychlorinated biphenyls (PCBs), but a microorganism capable of coupling its growth to PCB dechlorination has not been isolated. Here we describe the isolation from sediment of an ultramicrobacterium, strain DF-1, which is capable of dechlorinating PCBs containing double-flanked chlorines added as single congeners or as Aroclor 1260 in contaminated soil. The isolate requires Desulfovibrio spp. in...

  3. Assessment of anaerobic bacterial diversity and its effects on anaerobic system stability and the occurrence of antibiotic resistance genes.

    Science.gov (United States)

    Aydin, Sevcan; Ince, Bahar; Ince, Orhan

    2016-05-01

    This study evaluated the link between anaerobic bacterial diversity and, the biodegradation of antibiotic combinations and assessed how amending antibiotic combination and increasing concentration of antibiotics in a stepwise fashion influences the development of resistance genes in anaerobic reactors. The biodegradation, sorption and occurrence of the known antibiotic resistance genes (ARGs) of erythromycin and tetracycline were investigated using the processes of UV-HPLC and qPCR analysis respectively. Ion Torrent sequencing was used to detect microbial community changes in response to the addition of antibiotics. The overall results indicated that changes in the structure of a microbial community lead to changes in biodegradation capacity, sorption of antibiotics combinations and occurrence of ARGs. The enhanced biodegradation efficiency appeared to generate variations in the structure of the bacterial community. The results suggested that controlling the ultimate Gram-negative bacterial community, especially Acinetobacter-related populations, may promote the successful biodegradation of antibiotic combinations and reduce the occurrence of ARGs. PMID:26897411

  4. Anaerobic incorporation of the radiolabeled explosive TNT and metabolites into the organic soil matrix of contaminated soil after different treatment procedures

    International Nuclear Information System (INIS)

    Four bioreactor designs were performed to evaluate the level of incorporation of 14C-labeled 2,4,6-trinitrotoluene (TNT) and metabolites into the organic soil matrix of different anaerobically treated contaminated soils. The contaminated soils were amended with molasses slivers (80:20% per weight) as auxiliary substrate to enhance microbial activity. After 5 weeks (bioreactors 1 and 2), 8 weeks (bioreactor 3) and 12 weeks (bioreactor 4) of anaerobic incubation, we determined 41%, 58%, 72%, and 54%, respectively, of the initially applied radioactivity immobilized in various soil fractions. After alkaline hydrolyses of the solvent-extracted soils, low quantities of radiolabel were found in the humic and fulvic acid fractions, whereas the bulk of 14C activity was found to be strongly bound to the humin fraction (solid soil residues). The amounts of solvent extractable radioactivity were 53%, 40%, 16%, and 29% for bioreactors 1, 2, 3, and 4, respectively. The level of TNT transformation at the end of the experiments was within 90-94%. Regarding the results presented in this study, we can assume that there is the possibility of high incorporation levels of TNT metabolites into the soil organic matrix mediated by microbial cometabolism under strictly anoxic conditions

  5. Di-and tri-hydroxylated Kaurane derivatives from microbial transformation of Ent-Kaur-16-En-19-Ol by Cephalosporium aphidicola and their allelopathic activity on Lactuca sativa (lettuce)

    International Nuclear Information System (INIS)

    The use of microorganisms to induce chemical modifications in organic molecules is a very useful tool in organic synthesis, to obtain biologically active substances. The fungus Cephalosporium aphidicola is known by its ability to hydroxylate several skeleton positions of many classes of organic compounds. In this work, the microbial transformation of ent-kaur-16-en-19-01 (1) by C. aphidicola, afforded two hydroxylated compounds, ent-kauran-16β,19-diol (2) and ent-kauran-16β,17,19-triol (3). Their structures were established by 1D and 2D-NMR studies. Both compounds were tested for their action on the growth of radical and shoot of Lactuca sativa. (author)

  6. Studies about behavior of microbial degradation of organic compounds

    International Nuclear Information System (INIS)

    Some of TRU waste include organic compounds, thus these organic compounds might be nutrients for microbial growth at disposal site. This disposal system might be exposed to high alkali condition by cement compounds as engineering barrier material. In the former experimental studies, it has been supposed that microbial exist under pH = 12 and the microbial activity acclimated to high alkali condition are able to degrade asphalt under anaerobic condition. Microbes are called extremophile that exist in cruel habitat as high alkali or reductive condition. We know less information about the activity of extremophile, though any recent studies reveal them. In this study, the first investigation is metabolic pathway as microbial activity, the second is microbial degradation of aromatic compounds in anaerobic condition, and the third is microbial activity under high alkali. Microbial metabolic pathway consist of two systems that fulfill their function each other. One system is to generate energy for microbial activities and the other is to convert substances for syntheses of organisms' structure materials. As these systems are based on redox reaction between substances, it is made chart of the microbial activity region using pH, Eh, and depth as parameter, There is much report that microbe is able to degrade aromatic compounds under aerobic or molecular O2 utilizing condition. For degradation of aromatic compounds in anaerobic condition, supplying electron acceptor is required. Co-metabolism and microbial consortia has important role, too. Alcalophile has individual transporting system depending Na+ and acidic compounds contained in cell wall. Generating energy is key for survival and growth under high alkali condition. Co-metabolism and microbial consortia are effective for microbial degradation of aromatic compounds under high alkali and reductive condition, and utilizable electron acceptor and degradable organic compounds are required for keeping microbial activity and

  7. Anaerobic respiration of Escherichia coli in the mouse intestine.

    Science.gov (United States)

    Jones, Shari A; Gibson, Terri; Maltby, Rosalie C; Chowdhury, Fatema Z; Stewart, Valley; Cohen, Paul S; Conway, Tyrrell

    2011-10-01

    The intestine is inhabited by a large microbial community consisting primarily of anaerobes and, to a lesser extent, facultative anaerobes, such as Escherichia coli, which we have shown requires aerobic respiration to compete successfully in the mouse intestine (S. A. Jones et al., Infect. Immun. 75:4891-4899, 2007). If facultative anaerobes efficiently lower oxygen availability in the intestine, then their sustained growth must also depend on anaerobic metabolism. In support of this idea, mutants lacking nitrate reductase or fumarate reductase have extreme colonization defects. Here, we further explore the role of anaerobic respiration in colonization using the streptomycin-treated mouse model. We found that respiratory electron flow is primarily via the naphthoquinones, which pass electrons to cytochrome bd oxidase and the anaerobic terminal reductases. We found that E. coli uses nitrate and fumarate in the intestine, but not nitrite, dimethyl sulfoxide, or trimethylamine N-oxide. Competitive colonizations revealed that cytochrome bd oxidase is more advantageous than nitrate reductase or fumarate reductase. Strains lacking nitrate reductase outcompeted fumarate reductase mutants once the nitrate concentration in cecal mucus reached submillimolar levels, indicating that fumarate is the more important anaerobic electron acceptor in the intestine because nitrate is limiting. Since nitrate is highest in the absence of E. coli, we conclude that E. coli is the only bacterium in the streptomycin-treated mouse large intestine that respires nitrate. Lastly, we demonstrated that a mutant lacking the NarXL regulator (activator of the NarG system), but not a mutant lacking the NarP-NarQ regulator, has a colonization defect, consistent with the advantage provided by NarG. The emerging picture is one in which gene regulation is tuned to balance expression of the terminal reductases that E. coli uses to maximize its competitiveness and achieve the highest possible population in

  8. Anaerobic azo dye reduction

    OpenAIRE

    Zee, van der, KG Kristoffer

    2002-01-01

    Azo dyes, aromatic moieties linked together by azo (-N=N-) chromophores, represent the largest class of dyes used in textile-processing and other industries. The release of these compounds into the environment is undesirable, not only because of their colour, but also because many azo dyes and their breakdown products are toxic and/or mutagenic to life. To remove azo dyes from wastewater, a biological treatment strategy based on anaerobic reduction of the azo dyes, followed by aerobic transfo...

  9. Microbial Methane Production Associated with Carbon Steel Corrosion in a Nigerian Oil Field

    OpenAIRE

    Mand, Jaspreet; Park, Hyung S.; Okoro, Chuma; Lomans, Bart P.; Smith, Seun; Chiejina, Leo; Voordouw, Gerrit

    2016-01-01

    Microbially influenced corrosion (MIC) in oil field pipeline systems can be attributed to many different types of hydrogenotrophic microorganisms including sulfate reducers, methanogens and acetogens. Samples from a low temperature oil reservoir in Nigeria were analyzed using DNA pyrotag sequencing. The microbial community compositions of these samples revealed an abundance of anaerobic methanogenic archaea. Activity of methanogens was demonstrated by incubating samples anaerobically in a bas...

  10. Anaerobic Treatment of Palm Oil Mill Effluent in Pilot-Scale Anaerobic EGSB Reactor

    Directory of Open Access Journals (Sweden)

    Jin Wang

    2015-01-01

    Full Text Available Large volumes of untreated palm oil mill effluent (POME pose threat to aquatic environment due to the presence of very high organic content. The present investigation involved two pilot-scale anaerobic expanded granular sludge bed (EGSB reactors, continuously operated for 1 year to treat POME. Setting HRT at 9.8 d, the anaerobic EGSB reactors reduced COD from 71179 mg/L to 12341 mg/L and recycled half of sludge by a dissolved air flotation (DAF. The average effluent COD was 3587 mg/L with the consistent COD removal efficiency of 94.89%. Adding cationic polymer (PAM dose of 30 mg/L to DAF unit and recycling its half of sludge caused granulation of anaerobic sludge. Bacilli and small coccid bacteria were the dominant microbial species of the reactor. The reactor produced 27.65 m3 of biogas per m3 of POME which was utilized for electricity generation.

  11. Occurrence of Anaerobic Ammonium Oxidation in the Yangtze Estuary

    Science.gov (United States)

    Hou, L.

    2013-12-01

    Over the past several decades, a large quantity of reactive nitrogen has been transported into the Yangtze estuarine and coastal water, due to intense human activities in the Yangtze River Basin. At present, it annually receives a high load of anthropogenic inorganic nitrogen (about 1.1 × 1011 mol N) from increased agricultural activities, fish farming, and domestic and industrial wastewater discharge in the Yangtze River Basin, consequently leading to severe eutrophication and frequent occurrences of harmful algal blooms in the estuary and adjacent coastal areas. Hence, the microbial nitrogen transformations are of major concern in the Yangtze Estuary. Anaerobic ammonium oxidation (anammox) has been reported to play a significant role in the removal of reactive nitrogen in aquatic ecosystems. In this study, the occurrences of anammox bacteria and associated activity in the Yangtze Estuary were evidenced with molecular and isotope-tracing techniques. It is observed that the anammox bacteria at the study area mainly consisted of Candidatus Scalindua, Brocadia, Kuenenia. Salinity was found to be a key environmental factor controlling distribution and diversity of the anammox bacterial community at the estuarine ecosystem. Also, temperature and organic carbon had significant influences on anammox bacterial biodiversity. Q-PCR assays of anammox bacteria indicated that their abundance had a range of 2.63 ×106 - 9.48 ×107 copies g-1 dry sediment, with high spatiotemporal heterogeneity. The potential anammox activities measured in the present work varied between 0.94 - 6.61nmol N g-1 dry sediment h-1, which were related to temperature, nitrite and anammox bacterial abundance. On the basis of the 15N tracing experiments, the anammox process was estimated to contribute 6.6 - 12.9 % to the total nitrogen loss whereas the remainder was attributed to denitrification.

  12. Factors controlling the rate of DDE dechlorination to DDMU in Palos Verdes margin sediments under anaerobic conditions.

    Science.gov (United States)

    Quensen, J F; Tiedje, J M; Jain, M K; Mueller, S A

    2001-01-15

    Marine sediments off the coast of the Palos Verdes Peninsula in California have been designated a Superfund site primarily because of the presence of DDE [1,1-dichloro-2,2-bis(p-chlorophenyl)ethene]. For decades, it was believed that DDE was not microbially transformed, but anaerobic bacteria in the Palos Verdes sediments reductively dechlorinate DDEto DDMU [1-chloro-2,2-bis(p-chlorophenyl)ethene], which is also found in the sediments. The effects of electron donor to sulfate ratio, available carbon, sampling sites, sediment depth, and temperature on the rate and extent of DDE dechlorination in anaerobic Palos Verdes sediment microcosms were investigated. Dechlorination rates varied, depending on the site and depth from which the sediments were collected, but DDE dechlorination occurred with sediments from all locations studied. Sulfate and low temperatures slowed dechlorination, but in the presence of sulfate and at in situ temperature, the dechlorination rates observed in the microcosms agree well with the observed rate of DDE disappearance from the Palos Verdes margin sediments. PMID:11347599

  13. Evaluation of PCB dechlorination pathways in anaerobic sediment microcosms using an anaerobic dechlorination model.

    Science.gov (United States)

    Demirtepe, Hale; Kjellerup, Birthe; Sowers, Kevin R; Imamoglu, Ipek

    2015-10-15

    A detailed quantitative analysis of anaerobic dechlorination (AD) pathways of polychlorinated biphenyls (PCBs) in sediment microcosms was performed by applying an anaerobic dechlorination model (ADM). The purpose of ADM is to systematically analyze changes in a contaminant profile that result from microbial reductive dechlorination according to empirically determined dechlorination pathways. In contrast to prior studies that utilized modeling tools to predict dechlorination pathways, ADM also provides quantification of individual pathways. As only microbial reductive dechlorination of PCBs occurred in the modeled laboratory microcosms, extensive analysis of AD pathways was possible without the complicating effect of concurrent physico-chemical or other weathering mechanisms. The results from this study showed: (1) ninety three AD pathways are active; (2) tetra- to hepta-chlorobiphenyl (CB) congeners were common intermediates in several AD pathways, penta-CBs being the most frequently observed; (3) the highest rates of dechlorination were for penta-CB homologs during the initial 185 days; (4) the dominant terminal products of AD were PCB 32(26-4), 49(24-25), 51(24-26), 52(25-25), 72(25-35), 73(26-35) and 100(246-24), (5) potential toxicity of the sediment was reduced. ADM serves as a powerful tool not only for a thorough analysis of AD pathways, but also for providing necessary input for numerical fate models (as a degradation term) that investigate dechlorination products or outcome of natural attenuation, or bioremediation/bioaugmentation of PCB-impacted sediments. PMID:25913678

  14. New perspectives in anaerobic digestion

    DEFF Research Database (Denmark)

    van Lier, J.B.; Tilche, A.; Ahring, Birgitte Kiær;

    2001-01-01

    requirements. In fact, most advances were achieved during the last three decades, when high-rate reactor systems were developed and a profound insight was obtained in the microbiology of the anaerobic communities. This insight led to a better understanding of anaerobic treatment and, subsequently, to a broader......The IWA specialised group on anaerobic digestion (AD) is one of the oldest working groups of the former IAWQ organisation. Despite the fact that anaerobic technology dates back more than 100 years, the technology is still under development, adapting novel treatment systems to the modern...

  15. Microbial dynamics in natural aquifers

    OpenAIRE

    Bajracharya, Bijendra Man

    2016-01-01

    Microorganisms in groundwater form ecosystems that can transform chemical compounds. Quantitatively understanding microbial dynamics in soils and groundwater is thus essential for pollutant dynamics and biogeochemistry in the subsurface. This dissertation addresses three factors influencing microbial dynamics in aquifers and soils, namely: (1) the influence of grazing on bacteria in eutrophic aquifers, posing the question whether the carrying capacity of bacteria, which has been observed i...

  16. Anaerobic Nitrogen Fixers on Mars

    Science.gov (United States)

    Lewis, B. G.

    2000-07-01

    The conversion of atmospheric nitrogen gas to the protein of living systems is an amazing process of nature. The first step in the process is biological nitrogen fixation, the transformation of N2 to NH3. The phenomenon is crucial for feeding the billions of our species on Earth. On Mars, the same process may allow us to discover how life can adapt to a hostile environment, and render it habitable. Hostile environments also exist on Earth. For example, nothing grows in coal refuse piles due to the oxidation of pyrite and marcasite to sulfuric acid. Yet, when the acidity is neutralized, alfalfa and soybean plants develop root nodules typical of symbiotic nitrogen fixation with Rhizobium species possibly living in the pyritic material. When split open, these nodules exhibited the pinkish color of leghemoglobin, a protein in the nodule protecting the active nitrogen-fixing enzyme nitrogenase against the toxic effects of oxygen. Although we have not yet obtained direct evidence of nitrogenase activity in these nodules (reduction of acetylene to ethylene, for example), these findings suggested the possibility that nitrogen fixation was taking place in this hostile, non-soil material. This immediately raises the possibility that freeliving anaerobic bacteria which fix atmospheric nitrogen on Earth, could do the same on Mars.

  17. The biocathode of microbial electrochemical systems and microbially-influenced corrosion.

    Science.gov (United States)

    Kim, Byung Hong; Lim, Swee Su; Daud, Wan Ramli Wan; Gadd, Geoffrey Michael; Chang, In Seop

    2015-08-01

    The cathode reaction is one of the most important limiting factors in bioelectrochemical systems even with precious metal catalysts. Since aerobic bacteria have a much higher affinity for oxygen than any known abiotic cathode catalysts, the performance of a microbial fuel cell can be improved through the use of electrochemically-active oxygen-reducing bacteria acting as the cathode catalyst. These consume electrons available from the electrode to reduce the electron acceptors present, probably conserving energy for growth. Anaerobic bacteria reduce protons to hydrogen in microbial electrolysis cells (MECs). These aerobic and anaerobic bacterial activities resemble those catalyzing microbially-influenced corrosion (MIC). Sulfate-reducing bacteria and homoacetogens have been identified in MEC biocathodes. For sustainable operation, microbes in a biocathode should conserve energy during such electron-consuming reactions probably by similar mechanisms as those occurring in MIC. A novel hypothesis is proposed here which explains how energy can be conserved by microbes in MEC biocathodes. PMID:25976915

  18. Correlation of anaerobic ammonium oxidation and denitrification

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    The feasibility of the nitrous organic wastewater treated was studied in seven anaerobic sequencing batch reactors(ASBRs)(0 #-6 #) which had been run under stable anaerobic ammonium oxidation (Anammox). By means of monitoring and data analysis of COD, NH4+-N, NO2--N, NO3--N and pH, and of microbial test, the results revealed that the optimal Anammox performance was achieved from 2# reactor in which COD/NH4+-N was 1.65, Anammox bacteria and denitrification bacteria could coexist, and Anammox reaction and denitrification reaction could occur simultaneously in the reactors. The ratio of NH4+-N consumed: NO2--N consumed: NO3--N produced was 1:1.38:0.19 in 0# reactor which was not added glucose in the wastewater. When different ratio of COD and NH4+-N was fed for the reactors, the ratio of NO2--N consumed: NH4+-N consumed was in the range of 1.51-2.29 and the ratio of NO3-N produced: NH4+-N consumed in the range of 0-0.05.

  19. Anaerobic wastewater treatment using anaerobic baffled bioreactor: a review

    Science.gov (United States)

    Hassan, Siti; Dahlan, Irvan

    2013-09-01

    Anaerobic wastewater treatment is receiving renewed interest because it offers a means to treat wastewater with lower energy investment. Because the microorganisms involved grow more slowly, such systems require clever design so that the microbes have sufficient time with the substrate to complete treatment without requiring enormous reactor volumes. The anaerobic baffled reactor has inherent advantages over single compartment reactors due to its circulation pattern that approaches a plug flow reactor. The physical configuration of the anaerobic baffled reactor enables significant modifications to be made; resulting in a reactor which is proficient of treating complex wastewaters which presently require only one unit, ultimately significant reducing capital costs. This paper also concerns about mechanism, kinetic and hydrodynamic studies of anaerobic digestion for future application of the anaerobic baffled reactor for wastewater treatment.

  20. Gastroprotective effects of new diterpenoid derivatives from Azorella cuatrecasasii Mathias & Constance obtained using a β-cyclodextrin complex with microbial and chemical transformations.

    Science.gov (United States)

    Sepúlveda, Beatriz; Quispe, Cristina; Simirgiotis, Mario; García-Beltrán, Olimpo; Areche, Carlos

    2016-07-15

    Mulinane diterpenoids isolated from Azorella species have displayed gastroprotective effects in animal models. In this study we have transformed the main constituent, mulin-11,13-dien-20 oic acid from this plant using the filamentous fungus Mucor plumbeus and a β-cyclodextrin inclusion complex and we have obtained two main products with good yields (33% and 15% for compound 4 and 5, respectively) for further preparation of semisynthetic derivatives to evaluate their gastroprotective effects. In addition, one of the compounds isolated from Azorella cuatrecasasii was new (9-epi-13α-hydroxymulinene 1). Six new derivatives 4a-4c and 5a-5c were then prepared by simple chemical transformations. The structures of all compounds were elucidated by spectroscopic means based on 1D and 2D-NMR techniques. Some 8 diterpenes were evaluated for their gastroprotective effects in the ethanol/HCl-induced ulcer model in mice at 20mg/kg. The highest gastroprotective activity was shown by 7α,16-dihydroxymulin-11,13-dien-20-oic acid 5, which was higher than the reference drug lansoprazole, while 16-hydroxymulin-11,13-dien-20-oic acid 4 was as active as lansoprazole. PMID:27262597

  1. Microbial Community Analysis of a Single Chamber Microbial Fuel Cell Using Potato Wastewater

    Energy Technology Data Exchange (ETDEWEB)

    Zhen Li; Rishika Haynes; Eugene Sato; Malcolm Shields; Yoshiko Fujita; Chikashi Sato

    2014-04-01

    Microbial fuel cells (MFCs) convert chemical energy to electrical energy via bioelectrochemical reactions mediated by microorganisms. We investigated the diversity of the microbial community in an air cathode single chamber MFC that utilized potato-process wastewater as substrate. Terminal Restriction Fragment Length Polymorphism (T-RFLP) results indicated that the bacterial communities on the anode, cathode, control electrode, and MFC bulk fluid were similar, but differed dramatically from that of the anaerobic domestic sludge and potato wastewater inoculum. The 16S rDNA sequencing results showed that microbial species detected on the anode were predominantly within the phyla of Proteobacteria, Firmicutes, and Bacteroidetes. Fluorescent microscopy results indicated that there was a clear enhancement of biofilm formation on the anode. Results of this study could help improve understanding of the complexity of microbial communities and optimize the microbial composition for generating electricity by MFCs that utilize potato wastewater.

  2. Techniques for anaerobic susceptibility testing.

    Science.gov (United States)

    Thornsberry, C

    1977-03-01

    Minimal inhibitory concentrations (MICs) of antimicrobial agents for anaerobic bacteria can be determined by agar dilution and broth dilution (including microdilution) techniques. If MICs are not determined routinely, the disk broth or category methods are recommended for routine use. The Bauer-Kirby disk diffusion method and its interpretative standards should not be used for anaerobes. PMID:850089

  3. Anaerobic Digestion of Piggery Waste

    NARCIS (Netherlands)

    Velsen, van A.F.M.

    1981-01-01

    Anaerobic digestion is a biological process by which organic matter is converted to methane and carbon dioxide by microbes in the absence of air (oxygen). In nature, anaerobic conversions occur at all places where organic material accumulates and the supply of oxygen is deficient, e.g. in marshes an

  4. Economic viability of anaerobic digestion

    Energy Technology Data Exchange (ETDEWEB)

    Wellinger, A. [INFOENERGIE, Ettenhausen (Switzerland)

    1996-01-01

    The industrial application of anaerobic digestion is a relatively new, yet proven waste treatment technology. Anaerobic digestion reduces and upgrades organic waste, and is a good way to control air pollution as it reduces methane and nitrous gas emissions. For environmental and energy considerations, anaerobic digestion is a nearly perfect waste treatment process. However, its economic viability is still in question. A number of parameters - type of waste (solid or liquid), digester system, facility size, product quality and end use, environmental requirements, cost of alternative treatments (including labor), and interest rates - define the investment and operating costs of an anaerobic digestion facility. Therefore, identical facilities that treat the same amount and type of waste may, depending on location, legislation, and end product characteristics, reveal radically different costs. A good approach for evaluating the economics of anaerobic digestion is to compare it to treatment techniques such as aeration or conventional sewage treatment (for industrial wastewater), or composting and incineration (for solid organic waste). For example, the cost (per ton of waste) of in-vessel composting with biofilters is somewhat higher than that of anaerobic digestion, but the investment costs 1 1/2 to 2 times more than either composting or anaerobic digestion. Two distinct advantages of anaerobic digestion are: (1) it requires less land than either composting or incinerating, which translates into lower costs and milder environmental and community impacts (especially in densely populated areas); and (2) it produces net energy, which can be used to operate the facility or sold to nearby industries.

  5. How to use molecular biology tools for the study of the anaerobic digestion process?

    NARCIS (Netherlands)

    Cabezas, Angela; Araujo, de Juliana Calabria; Callejas, Cecilia; Galès, Amandine; Hamelin, Jérôme; Marone, Antonella; Machado de Sousa, Diana; Trably, Eric; Etchebehere, Claudia

    2015-01-01

    Anaerobic digestion is used with success for the treatment of solid waste, urban and industrial effluents with a concomitant energy production. The process is robust and stable, but the complexity of the microbial community involved in the process is not yet fully comprehensive. Nowadays, the stu

  6. Anaerobic oxidation of methane above gas hydrates at Hydrate Ridge, NE Pacific Ocean

    DEFF Research Database (Denmark)

    Treude, T.; Boetius, A.; Knittel, K.; Wallmann, K.; Jørgensen, BB

    2003-01-01

    At Hydrate Ridge (HR), Cascadia convergent margin, surface sediments contain massive gas hydrates formed from methane that ascends together with fluids along faults from deeper reservoirs. Anaerobic oxidation of methane (AOM), mediated by a microbial consortium of archaea and sulfate-reducing bac...

  7. Environmental and Taxonomic Bacterial Diversity of Anaerobic Uranium(IV) Bio-Oxidation ▿ †

    OpenAIRE

    Weber, Karrie A.; Thrash, J. Cameron; Van Trump, J. Ian; Achenbach, Laurie A.; Coates, John D.

    2011-01-01

    Microorganisms in diverse terrestrial surface and subsurface environments can anaerobically catalyze the oxidative dissolution of uraninite. While a limited quantity (∼5 to 12 μmol liter−1) of uranium is oxidatively dissolved in pure culture studies, the metabolism is coupled to electron transport, providing the potential of uraninite to support indigenous microbial populations and to solubilize uranium.

  8. Life in the absence of oxygen: alterative electron acceptors for anaerobic microorganisms in a petroleum environment

    NARCIS (Netherlands)

    Balk, M.

    2007-01-01

    Anaerobic microorganisms derive energy by transferring electrons from an external source or donor to an external electron sink or terminal acceptor and often have the capacity to reduce 2 or more terminal electron acceptors. The well-known type of microbial respiration, in which oxygen serves as an

  9. Membrane installation for enhanced up-flow anaerobic sludge blanket (UASB) performance.

    Science.gov (United States)

    Liu, Yin; Zhang, Kaisong; Bakke, Rune; Li, Chunming; Liu, Haining

    2013-09-01

    It is postulated that up-flow anaerobic sludge blanket (UASB) reactor efficiency can be enhanced by a membrane immersed in the reactor to operate it as an anaerobic membrane bioreactor (AnMBR) for low-strength wastewater treatment. This postulate was tested by comparing the performance with and without a hollow fiber microfiltration membrane module immersed in UASB reactors operated at two specific organic loading rates (SOLR). Results showed that membrane filtration enhanced process performance and stability, with over 90% total organic carbon (TOC) removal consistently achieved. More than 91% of the TOC removal was achieved by suspended biomass, while less than 6% was removed by membrane filtration and digestion in the membrane attached biofilm during stable AnMBRs operation. Although the membrane and its biofilm played an important role in initial stage of the high SOLR test, linear increased TOC removal by bulk sludge mainly accounted for the enhanced process performance, implying that membrane led to enhanced biological activity of the suspended sludge. The high retention of active fine sludge particles in suspension was the main reason for this significant improvement of performance and biological activity, which led to decreased SOLR with time to a theoretical optimal level around 2  g COD/g MLVSS·d and the establishment of a microbial community dominated by Methanothrix-like microbes. It was concluded that UASB process performance can be enhanced by transforming such to AnMBR operation when the loading rate is too high for sufficient sludge retention, and/or when the effluent water quality demands are especially stringent. PMID:23578587

  10. Paddy field – A natural sequential anaerobic–aerobic bioreactor for polychlorinated biphenyls transformation

    International Nuclear Information System (INIS)

    The environmental pollution and health risks caused by the improper disposal of electric and electronic waste (e-waste) have become urgent issues for the developing countries. One of the typical pollutants, polychlorinated biphenyls (PCBs), is commonly found in farmland in Taizhou, a major hotspot of e-waste recycling in China. This study investigated the amount of PCB residue in local farmlands. Biotransformation of PCBs was further studied under different water management conditions in paddy field with or without rice cultivation, with a special focus on the alternating flooded and drying processes. It was found that paddy field improved the attenuation of PCBs, especially for highly chlorinated congeners. In the microcosm experiment, 40% or more of the initial total PCBs was removed after sequential flood–drying treatments, compared to less than 10% in the sterilized control and 20% in the constant-drying system. Variation in the quantity of PCBs degrading and dechlorinating bacterial groups were closely related to the alteration of anaerobic–aerobic conditions. These results suggested that alternating anoxic–oxic environment in paddy field led to the sequential aerobic–anaerobic transformation of PCBs, which provided a favorable environment for natural PCB attenuation. - Highlights: • Paddy fields hold significantly lower level of PCBs than drylands, especially highly-chlorinated PCBs. • Microbial dechlorination of PCBs is favored under flooded conditions in paddy field. • Aerobic biodegradation of PCBs is benefited under dry conditions in paddy field. • PCBs dechlorination rate is accelerated in rice planted paddy field compared to the unplanted one. • Alternating anoxic–oxic environment in paddy field led to the sequential aerobic–anaerobic transformation of PCBs. - Alternating anoxic–oxic environment led to the sequential aerobic–anaerobic transformation of PCBs in paddy field, which could act as a natural sequential anaerobic

  11. Microbial Life in a Liquid Asphalt Desert

    CERN Document Server

    Schulze-Makuch, Dirk; Antonio, Marina Resendes de Sousa; Ali, Denzil; Hosein, Riad; Song, Young C; Yang, Jinshu; Zaikova, Elena; Beckles, Denise M; Guinan, Edward; Lehto, Harry J; Hallam, Steven J

    2010-01-01

    An active microbiota, reaching up to 10 E+7 cells/g, was found to inhabit a naturally occurring asphalt lake characterized by low water activity and elevated temperature. Geochemical and molecular taxonomic approaches revealed novel and deeply branching microbial assemblages mediating anaerobic hydrocarbon degradation, metal respiration and C1 utilization pathways. These results open a window into the origin and adaptive evolution of microbial life within recalcitrant hydrocarbon matrices, and establish the site as a useful analog for the liquid hydrocarbon environments on Saturn's moon Titan.

  12. Biogeochemistry of Microbial Coal-Bed Methane

    Science.gov (United States)

    Strąpoć, Dariusz; Mastalerz, Maria; Dawson, Katherine; Macalady, Jennifer; Callaghan, Amy V.; Wawrik, Boris; Turich, Courtney; Ashby, Matthew

    2011-05-01

    Microbial methane accumulations have been discovered in multiple coal-bearing basins over the past two decades. Such discoveries were originally based on unique biogenic signatures in the stable isotopic composition of methane and carbon dioxide. Basins with microbial methane contain either low-maturity coals with predominantly microbial methane gas or uplifted coals containing older, thermogenic gas mixed with more recently produced microbial methane. Recent advances in genomics have allowed further evaluation of the source of microbial methane, through the use of high-throughput phylogenetic sequencing and fluorescent in situ hybridization, to describe the diversity and abundance of bacteria and methanogenic archaea in these subsurface formations. However, the anaerobic metabolism of the bacteria breaking coal down to methanogenic substrates, the likely rate-limiting step in biogenic gas production, is not fully understood. Coal molecules are more recalcitrant to biodegradation with increasing thermal maturity, and progress has been made in identifying some of the enzymes involved in the anaerobic degradation of these recalcitrant organic molecules using metagenomic studies and culture enrichments. In recent years, researchers have attempted lab and subsurface stimulation of the naturally slow process of methanogenic degradation of coal.

  13. Biogeochemistry of microbial coal-bed methane

    Science.gov (United States)

    Strc, D.; Mastalerz, Maria; Dawson, K.; MacAlady, J.; Callaghan, A.V.; Wawrik, B.; Turich, C.; Ashby, M.

    2011-01-01

    Microbial methane accumulations have been discovered in multiple coal-bearing basins over the past two decades. Such discoveries were originally based on unique biogenic signatures in the stable isotopic composition of methane and carbon dioxide. Basins with microbial methane contain either low-maturity coals with predominantly microbial methane gas or uplifted coals containing older, thermogenic gas mixed with more recently produced microbial methane. Recent advances in genomics have allowed further evaluation of the source of microbial methane, through the use of high-throughput phylogenetic sequencing and fluorescent in situ hybridization, to describe the diversity and abundance of bacteria and methanogenic archaea in these subsurface formations. However, the anaerobic metabolism of the bacteria breaking coal down to methanogenic substrates, the likely rate-limiting step in biogenic gas production, is not fully understood. Coal molecules are more recalcitrant to biodegradation with increasing thermal maturity, and progress has been made in identifying some of the enzymes involved in the anaerobic degradation of these recalcitrant organic molecules using metagenomic studies and culture enrichments. In recent years, researchers have attempted lab and subsurface stimulation of the naturally slow process of methanogenic degradation of coal. Copyright ?? 2011 by Annual Reviews. All rights reserved.

  14. Microbial Life in a Liquid Asphalt Desert

    Science.gov (United States)

    Schulze-Makuch, Dirk; Haque, Shirin; de Sousa Antonio, Marina Resendes; Ali, Denzil; Hosein, Riad; Song, Young C.; Yang, Jinshu; Zaikova, Elena; Beckles, Denise M.; Guinan, Edward; Lehto, Harry J.; Hallam, Steven J.

    2011-04-01

    Pitch Lake in Trinidad and Tobago is a natural asphalt reservoir nourished by pitch seepage, a form of petroleum that consists of mostly asphaltines, from the surrounding oil-rich region. During upward seepage, pitch mixes with mud and gases under high pressure, and the lighter portion evaporates or is volatilized, which produces a liquid asphalt residue characterized by low water activity, recalcitrant carbon substrates, and noxious chemical compounds. An active microbial community of archaea and bacteria, many of them novel strains (particularly from the new Tar ARC groups), totaling a biomass of up to 107 cells per gram, was found to inhabit the liquid hydrocarbon matrix of Pitch Lake. Geochemical and molecular taxonomic approaches revealed diverse, novel, and deeply branching microbial lineages with the potential to mediate anaerobic hydrocarbon degradation processes in different parts of the asphalt column. In addition, we found markers for archaeal methane metabolism and specific gene sequences affiliated with facultative and obligate anaerobic sulfur- and nitrite-oxidizing bacteria. The microbial diversity at Pitch Lake was found to be unique when compared to microbial communities analyzed at other hydrocarbon-rich environments, which included Rancho Le Brea, a natural asphalt environment in California, USA, and an oil well and a mud volcano in Trinidad and Tobago, among other sites. These results open a window into the microbial ecology and biogeochemistry of recalcitrant hydrocarbon matrices and establish the site as a terrestrial analogue for modeling the biotic potential of hydrocarbon lakes such as those found on Saturn's largest moon Titan.

  15. Relating methanogen community structure and anaerobic digester function.

    Science.gov (United States)

    Bocher, B T W; Cherukuri, K; Maki, J S; Johnson, M; Zitomer, D H

    2015-03-01

    Much remains unknown about the relationships between microbial community structure and anaerobic digester function. However, knowledge of links between community structure and function, such as specific methanogenic activity (SMA) and COD removal rate, are valuable to improve anaerobic bioprocesses. In this work, quantitative structure-activity relationships (QSARs) were developed using multiple linear regression (MLR) to predict SMA using methanogen community structure descriptors for 49 cultures. Community descriptors were DGGE demeaned standardized band intensities for amplicons of a methanogen functional gene (mcrA). First, predictive accuracy of MLR QSARs was assessed using cross validation with training (n = 30) and test sets (n = 19) for glucose and propionate SMA data. MLR equations correlating band intensities and SMA demonstrated good predictability for glucose (q(2) = 0.54) and propionate (q(2) = 0.53). Subsequently, data from all 49 cultures were used to develop QSARs to predict SMA values. Higher intensities of two bands were correlated with higher SMA values; high abundance of methanogens associated with these two bands should be encouraged to attain high SMA values. QSARs are helpful tools to identify key microorganisms or to study and improve many bioprocesses. Development of new, more robust QSARs is encouraged for anaerobic digestion or other bioprocesses, including nitrification, nitritation, denitrification, anaerobic ammonium oxidation, and enhanced biological phosphorus removal. PMID:25562581

  16. Anaerobic growth of Corynebacterium glutamicum via mixed-acid fermentation.

    Science.gov (United States)

    Michel, Andrea; Koch-Koerfges, Abigail; Krumbach, Karin; Brocker, Melanie; Bott, Michael

    2015-11-01

    Corynebacterium glutamicum, a model organism in microbial biotechnology, is known to metabolize glucose under oxygen-deprived conditions to l-lactate, succinate, and acetate without significant growth. This property is exploited for efficient production of lactate and succinate. Our detailed analysis revealed that marginal growth takes place under anaerobic conditions with glucose, fructose, sucrose, or ribose as a carbon and energy source but not with gluconate, pyruvate, lactate, propionate, or acetate. Supplementation of glucose minimal medium with tryptone strongly enhanced growth up to a final optical density at 600 nm (OD600) of 12, whereas tryptone alone did not allow growth. Amino acids with a high ATP demand for biosynthesis and amino acids of the glutamate family were particularly important for growth stimulation, indicating ATP limitation and a restricted carbon flux into the oxidative tricarboxylic acid cycle toward 2-oxoglutarate. Anaerobic cultivation in a bioreactor with constant nitrogen flushing disclosed that CO2 is required to achieve maximal growth and that the pH tolerance is reduced compared to that under aerobic conditions, reflecting a decreased capability for pH homeostasis. Continued growth under anaerobic conditions indicated the absence of an oxygen-requiring reaction that is essential for biomass formation. The results provide an improved understanding of the physiology of C. glutamicum under anaerobic conditions. PMID:26276118

  17. ENANTIOSELECTIVE TRANSFORMATION OF CHIRAL PCBS AND THE INSECTICIDE FIPRONIL IN NATURAL ANOXIC SEDIMENTS

    Science.gov (United States)

    In this study, we examined the microbial transformation of two chiral PCB congeners and the insecticide fipronil in natural sediment microcosms. The specific goals of the study were to identify biotransformation pathways and determine if enantioselective microbial transformation ...

  18. Anaerobic Oxidation of Methane at a Marine Methane Seep in a Forearc Sediment Basin off Sumatra, Indian Ocean

    OpenAIRE

    Siegert, Michael; Krüger, Martin; Teichert, Barbara; Wiedicke, Michael; Schippers, Axel

    2011-01-01

    A cold methane seep was discovered in a forearc sediment basin off the island Sumatra, exhibiting a methane-seep adapted microbial community. A defined seep center of activity, like in mud volcanoes, was not discovered. The seep area was rather characterized by a patchy distribution of active spots. The relevance of anaerobic oxidation of methane (AOM) was reflected by 13C-depleted isotopic signatures of dissolved inorganic carbon. The anaerobic conversion of methane to CO2 was confirmed in a...

  19. Anaerobic Respiration on Tellurate and Other Metalloids in Bacteria from Hydrothermal Vent Fields in the Eastern Pacific Ocean

    OpenAIRE

    Csotonyi, Julius T.; Stackebrandt, Erko; Yurkov, Vladimir

    2006-01-01

    This paper reports the discovery of anaerobic respiration on tellurate by bacteria isolated from deep ocean (1,543 to 1,791 m) hydrothermal vent worms. The first evidence for selenite- and vanadate-respiring bacteria from deep ocean hydrothermal vents is also presented. Enumeration of the anaerobic metal(loid)-resistant microbial community associated with hydrothermal vent animals indicates that a greater proportion of the bacterial community associated with certain vent fauna resists and red...

  20. Influence of the Application of Sewage Sludge and Presence of Pesticides on the Development of the Microbial Population of the Soil and on the Transformation of Organic Carbon and Nutrient Elements

    Directory of Open Access Journals (Sweden)

    M. E.  Sanchez

    2005-01-01

    Full Text Available The laboratory trial consisted in incubating samples of soil and soil treated with sewage sludge, with the application of organophosphate pesticides with different active ingredients under controlled conditions of temperature and moisture. On the basis of a previous study of the influence of the application of sludge on the degradation of pesticides in the soil, a kinetic study is included of the degradation process and we concentrate on its effects on the development of the microbial population and the mineralization of organic carbon, together with the transformation of the main nutritive elements for plants: nitrogen and phosphorus. Three different active ingredients were used: fenitrothion, diazinon and dimethoate, all of them organophosphates with different chemical structures. From the results, it is to be observed that for all the conditions studied, degradation followed first-order kinetics. The presence of pesticides in the soil produces an increase in micro-organism populations in comparison with the control sample in the different matrices assayed, favouring the mineralization of organic carbon. As for available nitrogen, the predominant form, either ammonia or nitrates, depends on the active ingredient applied. On the other hand, the use of pesticides favours the process of mineralization/solubilization of phosphorus.

  1. Anaerobic oxidation of methane in grassland soils used for cattle husbandry

    Directory of Open Access Journals (Sweden)

    A. Bannert

    2012-04-01

    Full Text Available While the importance of anaerobic methane oxidation has been reported for marine ecosystems, the role of this process in soils is still questionable. Grasslands used as pastures for cattle-overwintering show an increase in anaerobic soil micro-sites caused by animal treading and excrement deposition. Therefore anaerobic potential methane oxidation activity of severely impacted soil from a cattle winter pasture was investigated in an incubation experiment under anaerobic conditions using 13C-labeled methane. We were able to detect a high microbial activity utilizing CH4 as nutrient source shown by the respiration of 13CO2. Measurements of possible terminal electron acceptors for anaerobic oxidation of methane were carried out. Soil sulfate concentrations were too low to explain the oxidation of the amount of methane added, but enough nitrate and iron(III were detected. However, only nitrate was consumed during the experiment. 13C-PLFA analyses clearly showed the utilization of CH4 as nutrient source mainly by organisms harbouring 16:1ω7 PLFAs. These lipids were found in Gram-negative microorganisms and anaerobes. The fact that these lipids are also typical for type I methanotrophs, known as aerobic methane oxidizers, might indicate a link between aerobic and anaerobic methane oxidation.

  2. [Reductive Dechlorination of Trichloroethylene by Benzoate-Enriched Anaerobic Cultures].

    Science.gov (United States)

    Li, Jiang-wei; Yang, Xiao-yong; Hu, An-yi; Yu, Chang-ping

    2015-10-01

    Gas chromatography was used to monitor the reductive dechlorination of trichloroethylene (TCE) by anaerobic enrichment cultures with benzoate as the sole carbon source. The 454 pyrosequencing technique was used to investigate the microbial community and the real-time quantitative PCR was used to quantify the gene copies of Dehalococcoides spp. (DHC). The results showed that TCE was dechlorinated to vinyl chloride along with the formation of methane in 94 days. The anaerobic enrichment cultures exhibited a high diversity, which were classified into 16 phyla, 33 classes, 52 orders, 88 families and 129 genera, while 51.2% of them belonged to unclassified group, which inferred that there were a large portion of bacteria with unknown functional in this system. Degradation of TCE was accomplished by reductive dechlorinating and other functional populations, and the DHC which carried tceA gene could be the dominant reductive dechlorinating populations in the system. PMID:26841609

  3. Thermal pre-treatment of primary and secondary sludge at 70ºC prior to anaerobic digestion

    DEFF Research Database (Denmark)

    Skiadas, Ioannis V.; Gavala, H.N.; Lu, Jingquan;

    2005-01-01

    In general, mesophilic anaerobic digestion of sewage sludge is more widely used compared to thermophilic digestion, mainly because of the lower energy requirements and higher stability of the process. However, the thermophilic anaerobic digestion process is usually characterised by accelerated....... The present study investigates the effect of the pre-treatment at 70 degrees C on thermophilic (55 degrees C) anaerobic digestion of primary and secondary sludge in continuously operated digesters. Thermal pre-treatment of primary and secondary sludge at 70 degrees C enhanced the removal of organic...... matter and the methane production during the subsequent anaerobic digestion step at 55 degrees C. It also greatly contributed to the destruction of pathogens present in primary sludge. Finally it results in enhanced microbial activities of the subsequent anaerobic step suggesting that the same...

  4. Parotitis due to anaerobic bacteria.

    Science.gov (United States)

    Matlow, A; Korentager, R; Keystone, E; Bohnen, J

    1988-01-01

    Although Staphylococcus aureus remains the pathogen most commonly implicated in acute suppurative parotitis, the pathogenic role of gram-negative facultative anaerobic bacteria and strict anaerobic organisms in this disease is becoming increasingly recognized. This report describes a case of parotitis due to Bacteroides disiens in an elderly woman with Sjögren's syndrome. Literature reports on seven additional cases of suppurative parotitis due to anaerobic bacteria are reviewed. Initial therapy of acute suppurative parotitis should include coverage for S. aureus and, in a very ill patient, coverage of gram-negative facultative organisms with antibiotics such as cloxacillin and an aminoglycoside. A failure to respond clinically to such a regimen or isolation of anaerobic bacteria should lead to the consideration of the addition of clindamycin or penicillin. PMID:3287567

  5. Zn(Ⅱ)对生物质碳源处理酸性矿山排水中厌氧微生物活性影响%Effect of Zn(II) on Microbial Activity in Anaerobic Acid Mine Drainage Treatment System with Biomass as Carbon Source

    Institute of Scientific and Technical Information of China (English)

    黎少杰; 陈天虎; 周跃飞; 岳正波; 金杰; 刘畅

    2012-01-01

    通过厌氧批实验的方法,探讨了在硫酸盐还原菌(SRB)法处理模拟酸性矿山排水(AMD)的过程中,以油菜秸秆为碳源时,Zn2+浓度对SRB活性的影响.结果表明,在60 d实验中,以油菜秸秆为碳源时,当Zn2+初始浓度在73.7~196.8 mg·L-1范围时,SRB具有良好活性,实验结束时,pH从初始的5.0上升至中性范围,硫酸根还原率达到96%以上,同时Zn2+浓度降至0.05 mg·L-1以下.Tessier固体形态分类、场发射扫描电镜(FE-SEM)和X射线衍射仪(XRD)分析发现,Zn以有机物及硫化物的形态被固定,其中硫化物主要为闪锌矿(ZnS).当Zn2+初始浓度为262.97 mg·L-1时,SRB的活性受到强烈的抑制,实验结束时,pH从初始的5.0降至4.0左右,硫酸根还原率只有27%,Zn2+维持在较高浓度范围(25 mg·L-1).油菜秸秆可以作为SRB法长期处理AMD的缓释碳源, 能为微生物生长繁殖提供物质和能量; 秸秆的吸附性可降低Zn2+的生物毒性,使得SRB可以适应高浓度的Zn2+; SRB可以通过形成硫化物矿物的形式固定元素Zn.%In this study, with rape straw as carbon source, anaerobic batch experiments were executed to investigate the effect of Zn(Ⅱ) on the activity of sulphate reducing bacteria (SRB) in the microbial treatment of simulative acid mine drainage (AMD). The results showed that during the 60 experimental days, when initial Zn2+ concentrations were in the range of 73.7 to 196.8 mg·L-1, SRB had high culturalbility. At the end of these experiments, pH values rose from initial 5.0 to neutral, about 96% of sulphate was reduced and the concentrations of Zn2+ reduced to 0.05 mg·L-1. The results of Tessier sequential extraction, field emission scanning electron microscope(FE-SEM) and X-ray diffraction(XRD) showed that Zn was found to be fixed through forming organic and sulphide (mainly sphalerite) compounds. For the experiment with high Zn2+ concentration (262

  6. Testing the profitability of Anaerobic Digestion in a large-scale UK dairy farm

    OpenAIRE

    Coz Leniz, Luis Fernando

    2011-01-01

    Anaerobic Digestion (AD) consists in the transformation of any organic non-woody material by micro-organisms into biogas. This biogas, composed of approximately 60 per cent methane can be further burnt and converted into electricity and heat. The UK’s livestock agricultural sector has tremendous potential to take advantage of this technology, as it produces over 150 million tonnes of animal manure annually. This is a commonly used input to feed anaerobic digestion plants. Furthermore, AD brin...

  7. Arsenic volatilization in model anaerobic biogas digesters

    International Nuclear Information System (INIS)

    Highlights: • Arsenic is volatilized form all model anaerobic digesters, including the non-treated ones. • Volatile As species can be identified and quantified in all digesters. • Non-arsenic treated digesters volatilization rates are higher than Roxarsone treated ones. - Abstract: Arsenic is a class 1 non-threshold carcinogen which is highly ubiquitous. Arsenic undergoes many different transformations (biotic or abiotic) between and within environmental compartments, leading to a number of different chemical species possessing different properties and toxicities. One specific transformation is As biotic volatilization which is coupled with As biomethylation and has been scarcely studied due to inherent sampling issues. Arsenic methylation/volatilization is also linked with methanogenesis and occurs in anaerobic environments. In China, rice straw and animal manure are very often used to produce biogas and both can contain high amounts of As, especially if the rice is grown in areas with heavy mining or smelting industries and if Roxarsone is fed to the animals. Roxarsone is an As-containing drug which is widely used in China to control coccidian intestinal parasites, to improve feed efficiency and to promote rapid growth. Previous work has shown that this compound degrades to inorganic As under anaerobic conditions. In this study the focus is on biotic transformations of As in small microcosms designed as biogas digester models (BDMs) using recently validated As traps, thus, enabling direct quantification and identification of volatile As species. It is shown that although there was a loss of soluble As in the BDMs, their conditions favored biomethylation. All reactors produced volatile As, especially the monomethylarsonic acid spiked ones with 413 ± 148 ng As (mean ± SD, n = 3) which suggest that the first methylation step, from inorganic As, is a limiting factor. The most abundant species was trimethylarsine, but the toxic arsine was present in the

  8. Inhibition of biogas production by alkyl benzene sulfonates (LAS) in a screening test for anaerobic biodegradability.

    Science.gov (United States)

    Garcia, M Teresa; Campos, Encarna; Dalmau, Manel; Illán, Patricia; Sánchez-Leal, Joaquin

    2006-02-01

    The effect of the inoculum source on the digestion of linear alkylbenzene sulfonates (LAS) under anaerobic conditions has been investigated. The potential for primary and ultimate LAS biodegradation of anaerobic sludge samples obtained from wastewater treatment plants (WWTPs) of different geographical locations was studied applying a batch test system. It was found that only 4-22% of the LAS added to the batch anaerobic digesters was primarily transformed suggesting a poor primary degradation of the LAS molecule in anaerobic discontinuous systems. Regarding ultimate biodegradation, the addition of LAS to the batch anaerobic digesters caused a reduction on the extent of biogas production. Significant differences in the inhibition extent of the biogas production were observed (4-26%) depending on the sludge used as inoculum. Effect of the surfactant on the anaerobic microorganisms was correlated with its concentration in the aqueous phase. Sorption of LAS on anaerobic sludge affects its toxicity by depletion of the available fraction of the surfactant. LAS content on sludge was related to the total amount of calcium and magnesium extractable ions. The presence of divalent cations promote the association of LAS with anaerobic sludge reducing its bioavailability and the extent of its inhibitory effect on the biogas production. PMID:16453170

  9. Microbial Oxidation of Iron Sulfides in Anaerobic Environments

    DEFF Research Database (Denmark)

    Vaclavkova, Sarka

    processes in natural anoxic soils is supported by the fact that about 17 % of drinking water wells in Denmark were lately found to be contaminated by NO3- in concentrations exceeding the allowed limit of 50 mgL-1. This study experimentally documented potential for MISON in a range of anoxic aquatic....... MISON was found to count for about 1/3 of the net NO3- reduction in MISON active environments, despite the presence of alternative electron donor, organic carbon. The rate of MISON was found to be dependent on the available reactive surface area of FeSx and on the microorganism involved. The findings...

  10. Microbial Ecology of Thermophilic Anaerobic Digestion. Final Report

    Science.gov (United States)

    Zinder, Stephen H.

    2000-04-15

    This grant supported research on methanogenic archaea. The two major areas that were supported were conversion of acetic acid to methane and nitrogen fixation by Methanosarcina. Among the achievements of this research were the isolation of novel methanogenic cultures, elucidation of the pathways from acetate to methane, description of a specific DNA-binding complex in nitrogen fixing methanogens, and demonstration of an alternative nitrogenase in Methanosarcina.

  11. Anaerobic electrochemical membrane bioreactor and process for wastewater treatment

    KAUST Repository

    Amy, Gary

    2015-07-09

    An anaerobic electrochemical membrane bioreactor (AnEMBR) can include a vessel into which wastewater can be introduced, an anode electrode in the vessel suitable for supporting electrochemically active microorganisms (EAB, also can be referred to as anode reducing bacteria, exoelectrogens, or electricigens) that oxidize organic compounds in the wastewater, and a cathode membrane electrode in the vessel, which is configured to pass a treated liquid through the membrane while retaining the electrochemically active microorganisms and the hydrogenotrophic methanogens (for example, the key functional microbial communities, including EAB, methanogens and possible synergistic fermenters) in the vessel. The cathode membrane electrode can be suitable for catalyzing the hydrogen evolution reaction to generate hydro en.

  12. Solubilization of lignin by the ruminal anaerobic fungus Neocallimastix patriciarum.

    OpenAIRE

    McSweeney, C S; Dulieu, A; Katayama, Y; Lowry, J B

    1994-01-01

    The ability of the ruminal anaerobic phycomycete Neocallimastix patriciarum to digest model lignin compounds and lignified structures in plant material was studied in batch culture. The fungus did not degrade or transform model lignin compounds that were representative of the predominant intermonomer linkages in lignin, nor did it solubilize acid detergent lignin that had been isolated from spear grass. In a stem fraction of sorghum, 33.6% of lignin was apparently solubilized by the fungus. S...

  13. Detection of anaerobic odontogenic infections by fluorine-18 fluoromisonidazole

    International Nuclear Information System (INIS)

    Odontogenic infections are a potential risk for patients who receive cervicofacial radiotherapy and should be treated before irradiation. Anaerobic microbial infections are the most common causes. This study assessed the value of the hypoxic imaging agent fluorine-18 fluoromisonidazole (FMISO) in detecting anaerobic odontogenic infections. Positron emission tomography (PET) imaging was performed at 2 h after injection of 370 MBq (10 mCi) of FMISO in 26 nasopharyngeal carcinoma patients and six controls with healthy teeth. Tomograms were interpreted visually to identify hypoxic foci in the jaw. All patients received thorough dental examinations as a pre-radiotherapy work-up. Fifty-one sites of periodonititis, 15 periodontal abscesses, 14 sites of dental caries with root canal infection, 23 sites of dental caries without root canal infection, and seven necrotic pulps were found by dental examination. Anaerobic pathogens were isolated from 12 patients. Increased uptake of FMISO was found at 45 out of 51 sites of periodontitis, all 15 sites of periodontal abscess, all 14 sites of dental caries with root canal infection, all seven sites of necrotic pulp and 15 sites of dental carries without obvious evidence of active root canal infection. No abnormal uptake was seen in the healthy teeth of patients or in the six controls. The diagnostic sensitivity, specificity, positive and negative predictive values, and accuracy of FMISO PET scan in detecting odontogenic infections were 93%, 97%, 84%, 99% and 96%, respectively. 18F-fluoride ion bone scan done in three patients showed that 18F-fluoride ion plays no role in the demonstration of anaerobic odontogenic infection. FMISO PET scan is a sensitive method for the detection of anaerobic odontogenic infections, and may play a complementary role in the evaluation of the dental condition of patients with head and neck tumours prior to radiation therapy. (orig.)

  14. Detection of anaerobic odontogenic infections by fluorine-18 fluoromisonidazole

    Energy Technology Data Exchange (ETDEWEB)

    Liu Renshyan [National PET/Cyclotron Center and Dept. of Nuclear Medicine, Taipei Veterans General Hospital, National Yang-Ming Univ. Medical School, Taipei (Taiwan, Province of China); Chu Leeshing [National PET/Cyclotron Center and Dept. of Nuclear Medicine, Taipei Veterans General Hospital, National Yang-Ming Univ. Medical School, Taipei (Taiwan, Province of China)]|[National Defense Medical Center, Taipei (Taiwan); Yen Sanhui [National PET/Cyclotron Center and Dept. of Nuclear Medicine, Taipei Veterans General Hospital, National Yang-Ming Univ. Medical School, Taipei (Taiwan, Province of China)]|[National Defense Medical Center, Taipei (Taiwan); Chang Chenpei [National PET/Cyclotron Center and Dept. of Nuclear Medicine, Taipei Veterans General Hospital, National Yang-Ming Univ. Medical School, Taipei (Taiwan, Province of China); Chou Kuoliang [National PET/Cyclotron Center and Dept. of Nuclear Medicine, Taipei Veterans General Hospital, National Yang-Ming Univ. Medical School, Taipei (Taiwan, Province of China); Wu Liangchi [National PET/Cyclotron Center and Dept. of Nuclear Medicine, Taipei Veterans General Hospital, National Yang-Ming Univ. Medical School, Taipei (Taiwan, Province of China); Chang Chiwei [National PET/Cyclotron Center and Dept. of Nuclear Medicine, Taipei Veterans General Hospital, National Yang-Ming Univ. Medical School, Taipei (Taiwan, Province of China); Lui Muntain [Dept. of Dentistry, Taipei Veterans General Hospital (Taiwan, Province of China); Chen Kuangy [National PET/Cyclotron Center and Dept. of Nuclear Medicine, Taipei Veterans General Hospital, National Yang-Ming Univ. Medical School, Taipei (Taiwan, Province of China)]|[National Defense Medical Center, Taipei (Taiwan); Yeh Shinhwa [National PET/Cyclotron Center and Dept. of Nuclear Medicine, Taipei Veterans General Hospital, National Yang-Ming Univ. Medical School, Taipei (Taiwan, Province of China)

    1996-10-01

    Odontogenic infections are a potential risk for patients who receive cervicofacial radiotherapy and should be treated before irradiation. Anaerobic microbial infections are the most common causes. This study assessed the value of the hypoxic imaging agent fluorine-18 fluoromisonidazole (FMISO) in detecting anaerobic odontogenic infections. Positron emission tomography (PET) imaging was performed at 2 h after injection of 370 MBq (10 mCi) of FMISO in 26 nasopharyngeal carcinoma patients and six controls with healthy teeth. Tomograms were interpreted visually to identify hypoxic foci in the jaw. All patients received thorough dental examinations as a pre-radiotherapy work-up. Fifty-one sites of periodonititis, 15 periodontal abscesses, 14 sites of dental caries with root canal infection, 23 sites of dental caries without root canal infection, and seven necrotic pulps were found by dental examination. Anaerobic pathogens were isolated from 12 patients. Increased uptake of FMISO was found at 45 out of 51 sites of periodontitis, all 15 sites of periodontal abscess, all 14 sites of dental caries with root canal infection, all seven sites of necrotic pulp and 15 sites of dental carries without obvious evidence of active root canal infection. No abnormal uptake was seen in the healthy teeth of patients or in the six controls. The diagnostic sensitivity, specificity, positive and negative predictive values, and accuracy of FMISO PET scan in detecting odontogenic infections were 93%, 97%, 84%, 99% and 96%, respectively. {sup 18}F-fluoride ion bone scan done in three patients showed that {sup 18}F-fluoride ion plays no role in the demonstration of anaerobic odontogenic infection. FMISO PET scan is a sensitive method for the detection of anaerobic odontogenic infections, and may play a complementary role in the evaluation of the dental condition of patients with head and neck tumours prior to radiation therapy. (orig.)

  15. Flat laminated microbial mat communities

    Science.gov (United States)

    Franks, Jonathan; Stolz, John F.

    2009-10-01

    Flat laminated microbial mats are complex microbial ecosystems that inhabit a wide range of environments (e.g., caves, iron springs, thermal springs and pools, salt marshes, hypersaline ponds and lagoons, methane and petroleum seeps, sea mounts, deep sea vents, arctic dry valleys). Their community structure is defined by physical (e.g., light quantity and quality, temperature, density and pressure) and chemical (e.g., oxygen, oxidation/reduction potential, salinity, pH, available electron acceptors and donors, chemical species) parameters as well as species interactions. The main primary producers may be photoautotrophs (e.g., cyanobacteria, purple phototrophs, green phototrophs) or chemolithoautophs (e.g., colorless sulfur oxidizing bacteria). Anaerobic phototrophy may predominate in organic rich environments that support high rates of respiration. These communities are dynamic systems exhibiting both spatial and temporal heterogeneity. They are characterized by steep gradients with microenvironments on the submillimeter scale. Diel oscillations in the physical-chemical profile (e.g., oxygen, hydrogen sulfide, pH) and species distribution are typical for phototroph-dominated communities. Flat laminated microbial mats are often sites of robust biogeochemical cycling. In addition to well-established modes of metabolism for phototrophy (oxygenic and non-oxygenic), respiration (both aerobic and anaerobic), and fermentation, novel energetic pathways have been discovered (e.g., nitrate reduction couple to the oxidation of ammonia, sulfur, or arsenite). The application of culture-independent techniques (e.g., 16S rRNA clonal libraries, metagenomics), continue to expand our understanding of species composition and metabolic functions of these complex ecosystems.

  16. Utilization of alternate chirality enantiomers in microbial communities

    Science.gov (United States)

    Pikuta, Elena V.; Hoover, Richard B.

    2010-09-01

    Our previous study of chirality led to interesting findings for some anaerobic extremophiles: the ability to metabolize substrates with alternate chirality enantiomers of amino acids and sugars. We have subsequently found that not just separate microbial species or strains but entire microbial communities have this ability. The functional division within a microbial community on proteo- and sugarlytic links was also reflected in a microbial diet with L-sugars and D-amino acids. Several questions are addressed in this paper. Why and when was this feature developed in a microbial world? Was it a secondary de novo adaptation in a bacterial world? Or is this a piece of genetic information that has been left in modern genomes as an atavism? Is it limited exclusively to prokaryotes, or does this ability also occur in eukaryotes? In this article, we have used a broader approach to study this phenomenon using anaerobic extremophilic strains from our laboratory collection. A series of experiments were performed on physiologically different groups of extremophilic anaerobes (pure and enrichment cultures). The following characteristics were studied: 1) the ability to grow on alternate chirality enantiomers - L-sugars and D- amino acids; 2) Growthinhibitory effect of alternate chirality enantiomers; 3) Stickland reaction with alternate chirality amino acids. The results of this research are presented in this paper.

  17. Gut microbial communities of social bees.

    Science.gov (United States)

    Kwong, Waldan K; Moran, Nancy A

    2016-06-01

    The gut microbiota can have profound effects on hosts, but the study of these relationships in humans is challenging. The specialized gut microbial community of honey bees is similar to the mammalian microbiota, as both are mostly composed of host-adapted, facultatively anaerobic and microaerophilic bacteria. However, the microbial community of the bee gut is far simpler than the mammalian microbiota, being dominated by only nine bacterial species clusters that are specific to bees and that are transmitted through social interactions between individuals. Recent developments, which include the discovery of extensive strain-level variation, evidence of protective and nutritional functions, and reports of eco-physiological or disease-associated perturbations to the microbial community, have drawn attention to the role of the microbiota in bee health and its potential as a model for studying the ecology and evolution of gut symbionts. PMID:27140688

  18. Ecology, Microbial

    Energy Technology Data Exchange (ETDEWEB)

    Konopka, Allan

    2009-03-19

    Microbial ecology is a relatively young discipline within the field of microbiology. Its modern history spans just the past 60 years, and the field is defined by its emphasis on understanding the interactions of microbes with their environment, rather than their behavior under artificial laboratory conditions. Because microbes are ubiquitous, microbial ecologists study a broad diversity of habitats that range from aquatic to terrestrial to plant- or animal-associated. This has made it a challenge to identify unifying principles within the field. One approach is to recognize that although the activity of microbes in nature have effects at the macroscale, they interact with their physical, chemical and biological milieu at a scale of micrometers. At this scale, several different microbial ecosystems can be defined, based upon association with particles, the presence of environmental gradients and the continuous availability of water. Principles applicable to microbial ecology reflect not only their population ecology and physiological ecology, but also their broad versatility and quantitative importance in the biosphere as biogeochemical catalysts and capacity for rapid physiological and evolutionary responses.

  19. Development of microorganisms in the chernozem under aerobic and anaerobic conditions

    Science.gov (United States)

    Polyanskaya, L. M.; Gorbacheva, M. A.; Milanovskii, E. Yu.; Zvyagintsev, D. G.

    2010-03-01

    A microbial succession was studied under aerobic and anaerobic conditions by means of experiments with microcosms in different horizons of a chernozem. It was revealed that, under aerobic conditions, all the microorganisms grow irrespective of the soil horizon; fungi and bacteria grow at the first succession stages, and actinomycetes grow at the last stages. It was shown that, in the case of a simulated anaerobiosis commonly used to study anaerobic populations of bacteria, the mycelium of micromycetes grows in the upper part of the chernozem’s A horizon. Under anaerobic conditions, the peak of the mycelium development is shifted from the 3rd to 7th days (typical for aerobic conditions) to the 7th to 15th days of incubation. The level of mycelium length’s stabilization under aerobic and anaerobic conditions also differs: it is higher or lower than the initial one, respectively. Under anaerobic conditions, the growth of fungal mycelium, bacteria, and actinomycetes in the lower part of the A horizon and in the B horizon is extremely weak. There was not any observed growth of actinomycetes in all the chernozem’s horizons under anaerobic conditions.

  20. Enumeration of Microbial Populations in Radioactive Environments by Epifluorescence Microscopy

    International Nuclear Information System (INIS)

    Epifluorescence microscopy was utilized to enumerate halophilic bacterial populations in two studies involving inoculated, actual radioactive waste/brine mixtures and pure brine solutions. The studies include an initial set of experiments designed to elucidate potential transformations of actinide-containing wastes under salt-repository conditions, including microbially mediated changes. The first study included periodic enumeration of bacterial populations of a mixed inoculum initially added to a collection of test containers. The contents of the test containers are the different types of actual radioactive waste that could potentially be stored in nuclear waste repositories in a salt environment. The transuranic waste was generated from materials used in actinide laboratory research. The results show that cell numbers decreased with time. Sorption of the bacteria to solid surfaces in the test system is discussed as a possible mechanism for the decrease in cell numbers. The second study was designed to determine radiological and/or chemical effects of 239Pu, 243Am, 237Np, 232Th and 238U on the growth of pure and mixed anaerobic, denitrifying bacterial cultures in brine media. Pu, Am, and Np isotopes at concentrations of -5M, -6M and -4M respectively, and Th and U isotopes -3M were tested in these media. The results indicate that high actinide concentration affected both the bacterial growth rate and morphology. However, relatively minor effects from Am were observed at all tested concentrations with the pure culture