WorldWideScience

Sample records for altering root system

  1. Mycorrhiza alters the profile of root hairs in trifoliate orange.

    Science.gov (United States)

    Wu, Qiang-Sheng; Liu, Chun-Yan; Zhang, De-Jian; Zou, Ying-Ning; He, Xin-Hua; Wu, Qing-Hua

    2016-04-01

    Root hairs and arbuscular mycorrhiza (AM) coexist in root systems for nutrient and water absorption, but the relation between AM and root hairs is poorly known. A pot study was performed to evaluate the effects of four different AM fungi (AMF), namely, Claroideoglomus etunicatum, Diversispora versiformis, Funneliformis mosseae, and Rhizophagus intraradices on root hair development in trifoliate orange (Poncirus trifoliata) seedlings grown in sand. Mycorrhizal seedlings showed significantly higher root hair density than non-mycorrhizal seedlings, irrespective of AMF species. AMF inoculation generally significantly decreased root hair length in the first- and second-order lateral roots but increased it in the third- and fourth-order lateral roots. AMF colonization induced diverse responses in root hair diameter of different order lateral roots. Considerably greater concentrations of phosphorus (P), nitric oxide (NO), glucose, sucrose, indole-3-acetic acid (IAA), and methyl jasmonate (MeJA) were found in roots of AM seedlings than in non-AM seedlings. Levels of P, NO, carbohydrates, IAA, and MeJA in roots were correlated with AM formation and root hair development. These results suggest that AMF could alter the profile of root hairs in trifoliate orange through modulation of physiological activities. F. mosseae, which had the greatest positive effects, could represent an efficient AM fungus for increasing fruit yields or decreasing fertilizer inputs in citrus production.

  2. The presence of nodules on legume root systems can alter phenotypic plasticity in response to internal nitrogen independent of nitrogen fixation.

    Science.gov (United States)

    Goh, Chooi-Hua; Nicotra, Adrienne B; Mathesius, Ulrike

    2016-04-01

    All higher plants show developmental plasticity in response to the availability of nitrogen (N) in the soil. In legumes, N starvation causes the formation of root nodules, where symbiotic rhizobacteria fix atmospheric N2 for the host in exchange for fixed carbon (C) from the shoot. Here, we tested whether plastic responses to internal [N] of legumes are altered by their symbionts. Glasshouse experiments compared root phenotypes of three legumes, Medicago truncatula, Medicago sativa and Trifolium subterraneum, inoculated with their compatible symbiont partners and grown under four nitrate levels. In addition, six strains of rhizobia, differing in their ability to fix N2 in M. truncatula, were compared to test if plastic responses to internal [N] were dependent on the rhizobia or N2 -fixing capability of the nodules. We found that the presence of rhizobia affected phenotypic plasticity of the legumes to internal [N], particularly in root length and root mass ratio (RMR), in a plant species-dependent way. While root length responses of M. truncatula to internal [N] were dependent on the ability of rhizobial symbionts to fix N2 , RMR response to internal [N] was dependent only on initiation of nodules, irrespective of N2 -fixing ability of the rhizobia strains.

  3. Graviresponsiveness of surgically altered primary roots of Zea mays

    Science.gov (United States)

    Maimon, E.; Moore, R.

    1991-01-01

    We examined the gravitropic responses of surgically altered primary roots of Zea mays to determine the route by which gravitropic inhibitors move from the root tip to the elongating zone. Horizontally oriented roots, from which a 1-mm-wide girdle of epidermis plus 2-10 layers of cortex were removed from the apex of the elongating zone, curve downward. However, curvature occurred only apical to the girdle. Filling the girdle with mucilage-like material transmits curvature beyond the girdle. Vertically oriented roots with a half-girdle' (i.e. the epidermis and 2-10 layers of the cortex removed from half of the circumference of the apex of the elongating zone) curve away from the girdle. Inserting the half-girdle at the base of the elongating zone induces curvature towards the girdle. Filling the half-circumference girdles with mucilage-like material reduced curvature significantly. Stripping the epidermis and outer 2-5 layers of cortex from the terminal 1.5 cm of one side of a primary root induces curvature towards the cut, irrespective of the root's orientation to gravity. This effect is not due to desiccation since treated roots submerged in water also curved towards their cut surface. Coating a root's cut surface with a mucilage-like substance minimizes curvature. These results suggest that the outer cell-layers of the root, especially the epidermis, play an important role in root gravicurvature, and the gravitropic signals emanating from the root tip can move apoplastically through mucilage.

  4. Root bacterial endophytes alter plant phenotype, but not physiology

    Directory of Open Access Journals (Sweden)

    Jeremiah A. Henning

    2016-11-01

    Full Text Available Plant traits, such as root and leaf area, influence how plants interact with their environment and the diverse microbiota living within plants can influence plant morphology and physiology. Here, we explored how three bacterial strains isolated from the Populus root microbiome, influenced plant phenotype. We chose three bacterial strains that differed in predicted metabolic capabilities, plant hormone production and metabolism, and secondary metabolite synthesis. We inoculated each bacterial strain on a single genotype of Populus trichocarpa and measured the response of plant growth related traits (root:shoot, biomass production, root and leaf growth rates and physiological traits (chlorophyll content, net photosynthesis, net photosynthesis at saturating light–Asat, and saturating CO2–Amax. Overall, we found that bacterial root endophyte infection increased root growth rate up to 184% and leaf growth rate up to 137% relative to non-inoculated control plants, evidence that plants respond to bacteria by modifying morphology. However, endophyte inoculation had no influence on total plant biomass and photosynthetic traits (net photosynthesis, chlorophyll content. In sum, bacterial inoculation did not significantly increase plant carbon fixation and biomass, but their presence altered where and how carbon was being allocated in the plant host.

  5. An altered hydrotropic response (ahr1) mutant of Arabidopsis recovers root hydrotropism with cytokinin

    Science.gov (United States)

    Saucedo, Manuel; Ponce, Georgina; Campos, María Eugenia; Eapen, Delfeena; García, Edith; Luján, Rosario; Sánchez, Yoloxóchitl; Cassab, Gladys I.

    2012-01-01

    Roots are highly plastic and can acclimate to heterogeneous and stressful conditions. However, there is little knowledge of the effect of moisture gradients on the mechanisms controlling root growth orientation and branching, and how this mechanism may help plants to avoid drought responses. The aim of this study was to isolate mutants of Arabidopsis thaliana with altered hydrotropic responses. Here, altered hydrotropic response 1 (ahr1), a semi-dominant allele segregating as a single gene mutation, was characterized. ahr1 directed the growth of its primary root towards the source of higher water availability and developed an extensive root system over time. This phenotype was intensified in the presence of abscisic acid and was not observed if ahr1 seedlings were grown in a water stress medium without a water potential gradient. In normal growth conditions, primary root growth and root branching of ahr1 were indistinguishable from those of the wild type (wt). The altered hydrotropic growth of ahr1 roots was confirmed when the water-rich source was placed at an angle of 45° from the gravity vector. In this system, roots of ahr1 seedlings grew downward and did not display hydrotropism; however, in the presence of cytokinins, they exhibited hydrotropism like those of the wt, indicating that cytokinins play a critical role in root hydrotropism. The ahr1 mutant represents a valuable genetic resource for the study of the effects of cytokinins in the differential growth of hydrotropism and control of lateral root formation during the hydrotropic response. PMID:22442413

  6. Phosphate Availability Alters Lateral Root Anatomy and Root Architecture of Fraxinus mandshurica Rupr. Seedlings

    Institute of Scientific and Technical Information of China (English)

    Chu WU; Xing WEI; Hai-Long SUN; Zheng-Quan WANG

    2005-01-01

    Plants have evolved some mechanisms to maximize the efficiency of phosphorus acquisition.Changes in root architecture are one such mechanism. When Fraxinus mandshurica Rupr. seedlings were grown under conditions of low phosphorus availability, the length of cells in the meristem zone of the lateral roots was longer, but the length of cells in the elongation and mature zones of the lateral roots was shorter,compared with seedlings grown under conditions of high phosphorus availability. The elongation rates of primary roots increased as phosphorus availability increased, but the elongation rates of the branched zones of the primary roots decreased. The number of lateral root primordia and the length of the lateral roots decreased as phosphorus availability increased. The topological index (altitude slope) decreased as phosphorus availability increased, suggesting that root architecture tended to be herringbone-like when seedlings were grown under conditions of low phosphate availability. Herringbone-like root systems exploit nutrients more efficiently, but they have higher construction costs than root systems with a branching pattern.

  7. D-Root: a system for cultivating plants with the roots in darkness or under different light conditions.

    Science.gov (United States)

    Silva-Navas, Javier; Moreno-Risueno, Miguel A; Manzano, Concepción; Pallero-Baena, Mercedes; Navarro-Neila, Sara; Téllez-Robledo, Bárbara; Garcia-Mina, Jose M; Baigorri, Roberto; Gallego, Francisco Javier; del Pozo, Juan C

    2015-10-01

    In nature roots grow in the dark and away from light (negative phototropism). However, most current research in root biology has been carried out with the root system grown in the presence of light. Here, we have engineered a device, called Dark-Root (D-Root), to grow plants in vitro with the aerial part exposed to the normal light/dark photoperiod while the roots are in the dark or exposed to specific wavelengths or light intensities. D-Root provides an efficient system for cultivating a large number of seedlings and easily characterizing root architecture in the dark. At the morphological level, root illumination shortens root length and promotes early emergence of lateral roots, therefore inducing expansion of the root system. Surprisingly, root illumination also affects shoot development, including flowering time. Our analyses also show that root illumination alters the proper response to hormones or abiotic stress (e.g. salt or osmotic stress) and nutrient starvation, enhancing inhibition of root growth. In conclusion, D-Root provides a growing system closer to the natural one for assaying Arabidopsis plants, and therefore its use will contribute to a better understanding of the mechanisms involved in root development, hormonal signaling and stress responses.

  8. Root bacterial endophytes alter plant phenotype, but not physiology

    DEFF Research Database (Denmark)

    Henning, Jeremiah A.; Weston, David J.; Pelletier, Dale A.;

    2016-01-01

    (root:shoot, biomass production, root and leaf growth rates) and physiological traits (chlorophyll content, net photosynthesis, net photosynthesis at saturating light-Asat, and saturating CO2-Amax). Overall, we found that bacterial root endophyte infection increased root growth rate up to 184% and leaf...

  9. X-ray computed tomography uncovers root-root interactions: quantifying spatial relationships between interacting root systems in three dimensions

    Directory of Open Access Journals (Sweden)

    Alexander Martin Paya

    2015-04-01

    Full Text Available Research in the field of plant biology has recently demonstrated that inter- and intra-specific interactions belowground can dramatically alter root growth. Our aim was to answer questions related to the effect of inter- vs. intra-specific interactions on the growth and utilization of undisturbed space by fine roots within three dimensions (3D using micro X-ray computed tomography. To achieve this, Populus tremuloides (quaking aspen and Picea mariana (black spruce seedlings were planted into containers as either solitary individuals, or inter-/intra-specific pairs, allowed to grow for two months, and 3D metrics developed in order to quantify their use of belowground space. In both aspen and spruce, inter-specific root interactions produced a shift in the vertical distribution of the root system volume, and deepened the average position of root tips when compared to intra-specifically growing seedlings. Inter-specific interactions also increased the minimum distance between root tips belonging to the same root system. There was no effect of belowground interactions on the radial distribution of roots, or the directionality of lateral root growth for either species. In conclusion, we found that significant differences were observed more often when comparing controls (solitary individuals and paired seedlings (inter- or intra-specific, than when comparing inter- and intra-specifically growing seedlings. This would indicate that competition between neighboring seedlings was more responsible for shifting fine root growth in both species than was neighbor identity. However, significant inter- vs. intra-specific differences were observed, which further emphasizes the importance of biological interactions in competition studies.

  10. Root bacterial endophytes alter plant phenotype, but not physiology

    DEFF Research Database (Denmark)

    Henning, Jeremiah A.; Weston, David J.; Pelletier, Dale A.

    2016-01-01

    Plant traits, such as root and leaf area, influence how plants interact with their environment and the diverse microbiota living within plants can influence plant morphology and physiology. Here, we explored how three bacterial strains isolated from the Populus root microbiome, influenced plant...... phenotype. We chose three bacterial strains that differed in predicted metabolic capabilities, plant hormone production and metabolism, and secondary metabolite synthesis. We inoculated each bacterial strain on a single genotype of Populus trichocarpa and measured the response of plant growth related traits...... (root:shoot, biomass production, root and leaf growth rates) and physiological traits (chlorophyll content, net photosynthesis, net photosynthesis at saturating light-Asat, and saturating CO2-Amax). Overall, we found that bacterial root endophyte infection increased root growth rate up to 184% and leaf...

  11. The Influence of Plant Root Systems on Subsurface Flow: Implications for Slope Stability

    Science.gov (United States)

    Although research has explained how plant roots mechanically stabilize soils, in this article we explore how root systems create networks of preferential flow and thus influence water pressures in soils to trigger landslides. Root systems may alter subsurface flow: Hydrological m...

  12. Dynamics of heterorhizic root systems: protoxylem groups within the fine-root system of Chamaecyparis obtusa.

    Science.gov (United States)

    Hishi, Takuo; Takeda, Hiroshi

    2005-08-01

    To understand the physiology of fine-root functions in relation to soil organic sources, the heterogeneity of individual root functions within a fine-root system requires investigation. Here the heterogeneous dynamics within fine-root systems are reported. The fine roots of Chamaecyparis obtusa were sampled using a sequential ingrowth core method over 2 yr. After color categorization, roots were classified into protoxylem groups from anatomical observations. The root lengths with diarch and triarch groups fluctuated seasonally, whereas the tetrarch root length increased. The percentage of secondary root mortality to total mortality increased with increasing amounts of protoxylem. The carbon : nitrogen ratio indicated that the decomposability of primary roots might be greater than that of secondary roots. The position of diarch roots was mostly apical, whereas tetrarch roots tended to be distributed in basal positions within the root architecture. We demonstrate the heterogeneous dynamics within a fine-root system of C. obtusa. Fine-root heterogeneity should affect soil C dynamics. This heterogeneity is determined by the branching position within the root architecture.

  13. Root exudate-induced alterations in Bacillus cereus cell wall contribute to root colonization and plant growth promotion.

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    Swarnalee Dutta

    Full Text Available The outcome of an interaction between plant growth promoting rhizobacteria and plants may depend on the chemical composition of root exudates (REs. We report the colonization of tobacco, and not groundnut, roots by a non-rhizospheric Bacillus cereus (MTCC 430. There was a differential alteration in the cell wall components of B. cereus in response to the REs from tobacco and groundnut. Attenuated total reflectance infrared spectroscopy revealed a split in amide I region of B. cereus cells exposed to tobacco-root exudates (TRE, compared to those exposed to groundnut-root exudates (GRE. In addition, changes in exopolysaccharides and lipid-packing were observed in B. cereus grown in TRE-amended minimal media that were not detectable in GRE-amended media. Cell-wall proteome analyses revealed upregulation of oxidative stress-related alkyl hydroperoxide reductase, and DNA-protecting protein chain (Dlp-2, in response to GRE and TRE, respectively. Metabolism-related enzymes like 2-amino-3-ketobutyrate coenzyme A ligase and 2-methylcitrate dehydratase and a 60 kDa chaperonin were up-regulated in response to TRE and GRE. In response to B. cereus, the plant roots altered their exudate-chemodiversity with respect to carbohydrates, organic acids, alkanes, and polyols. TRE-induced changes in surface components of B. cereus may contribute to successful root colonization and subsequent plant growth promotion.

  14. A statistical approach to root system classification.

    Directory of Open Access Journals (Sweden)

    Gernot eBodner

    2013-08-01

    Full Text Available Plant root systems have a key role in ecology and agronomy. In spite of fast increase in root studies, still there is no classification that allows distinguishing among distinctive characteristics within the diversity of rooting strategies. Our hypothesis is that a multivariate approach for plant functional type identification in ecology can be applied to the classification of root systems. We demonstrate that combining principal component and cluster analysis yields a meaningful classification of rooting types based on morphological traits. The classification method presented is based on a data-defined statistical procedure without a priori decision on the classifiers. Biplot inspection is used to determine key traits and to ensure stability in cluster based grouping. The classification method is exemplified with simulated root architectures and morphological field data. Simulated root architectures showed that morphological attributes with spatial distribution parameters capture most distinctive features within root system diversity. While developmental type (tap vs. shoot-borne systems is a strong, but coarse classifier, topological traits provide the most detailed differentiation among distinctive groups. Adequacy of commonly available morphologic traits for classification is supported by field data. Three rooting types emerged from measured data, distinguished by diameter/weight, density and spatial distribution respectively. Similarity of root systems within distinctive groups was the joint result of phylogenetic relation and environmental as well as human selection pressure. We concluded that the data-define classification is appropriate for integration of knowledge obtained with different root measurement methods and at various scales. Currently root morphology is the most promising basis for classification due to widely used common measurement protocols. To capture details of root diversity efforts in architectural measurement

  15. A statistical approach to root system classification.

    Science.gov (United States)

    Bodner, Gernot; Leitner, Daniel; Nakhforoosh, Alireza; Sobotik, Monika; Moder, Karl; Kaul, Hans-Peter

    2013-01-01

    Plant root systems have a key role in ecology and agronomy. In spite of fast increase in root studies, still there is no classification that allows distinguishing among distinctive characteristics within the diversity of rooting strategies. Our hypothesis is that a multivariate approach for "plant functional type" identification in ecology can be applied to the classification of root systems. The classification method presented is based on a data-defined statistical procedure without a priori decision on the classifiers. The study demonstrates that principal component based rooting types provide efficient and meaningful multi-trait classifiers. The classification method is exemplified with simulated root architectures and morphological field data. Simulated root architectures showed that morphological attributes with spatial distribution parameters capture most distinctive features within root system diversity. While developmental type (tap vs. shoot-borne systems) is a strong, but coarse classifier, topological traits provide the most detailed differentiation among distinctive groups. Adequacy of commonly available morphologic traits for classification is supported by field data. Rooting types emerging from measured data, mainly distinguished by diameter/weight and density dominated types. Similarity of root systems within distinctive groups was the joint result of phylogenetic relation and environmental as well as human selection pressure. We concluded that the data-define classification is appropriate for integration of knowledge obtained with different root measurement methods and at various scales. Currently root morphology is the most promising basis for classification due to widely used common measurement protocols. To capture details of root diversity efforts in architectural measurement techniques are essential.

  16. Enhanced MRI in compressed lumbosacral nerve root; Alteration of vascular peameability in nerve root

    Energy Technology Data Exchange (ETDEWEB)

    Morita, Tomofumi; Yoshizawa, Hidezo; Nakai, Sadaaki; Kobayashi, Shigeru; Hachiya, Hiromichi; Nakagawa, Masato; Nishimoto, Satoshi (Fujita Health Univ., Toyoake, Aichi (Japan). School of Medicine)

    1993-04-01

    The study was undertaken to assess how enhanced MRI reflects pathophysiology of the nerve root. In fundamental study, the seventh left lumbar nerve root was compressed by a clip for one hour in 10 mongrel dogs. Thirty min after removal of mechanical compression, gadolinium and Evans blue albumin (EBA) were iv injected. Then, the dogs were killed 10 min later. A mass of lumbosacral nerve root was removed for MR imaging. In addition, nerve root slices were prepared to examine changes in vascular permeability of EBA under microscopy. The compression area of nerve root was seen as hyperintensity on enhanced MRI, corresponding to extravascular leakage of EBA that resulted from the damaged blood-nerve barrier, i.e., edema within the root on microscope. In a clinical setting, 27 patients with lumbar disc herniation underwent MRI for the observation of the nerve root. In 8 of these 27 patients, the nerve root was seen as hyperintensity. This suggests that approximately one third of such patients may have edema within the nerve root. (N.K.).

  17. Systems approaches to study root architecture dynamics

    Directory of Open Access Journals (Sweden)

    Candela eCuesta

    2013-12-01

    Full Text Available The plant root system is essential for providing anchorage to the soil, supplying minerals and water, and synthesizing metabolites. It is a dynamic organ modulated by external cues such as environmental signals, water and nutrients availability, salinity and others. Lateral roots are initiated from the primary root post-embryonically, after which they progress through discrete developmental stages which can be independently controlled, providing a high level of plasticity during root system formation.Within this review, main contributions are presented, from the classical forward genetic screens to the more recent high-throughput approaches, combined with computer model predictions, dissecting how lateral roots and thereby root system architecture is established and developed.

  18. Rapid phenotyping of alfalfa root system architecture

    Science.gov (United States)

    Root system architecture (RSA) influences the capacity of an alfalfa plant for symbiotic nitrogen fixation, nutrient uptake and water use efficiency, resistance to frost heaving, winterhardiness, and some pest and pathogen resistance. However, we currently lack a basic understanding of root system d...

  19. Species-specific fine root biomass distribution alters competition in mixed forests under climate change

    Science.gov (United States)

    Reyer, Christopher; Gutsch, Martin; Lasch, Petra; Suckow, Felicitas; Sterck, Frank; Mohren, Frits

    2010-05-01

    The importance of mixed forests in European silviculture has increased due to forest conversion policies and multifunctional forest management. Concurrently, evidences for substantial impacts of climate change on forest ecosystems accumulate. Projected drier and warmer conditions alter the water relations of tree species, their growth and ultimately their inter-specific competition in mixed stands. Process-based models are scientific tools to study the impact of climate change on and to deepen the understanding of the functioning of these systems based on ecological mechanisms. They allow for long-term, stand-level studies of forest dynamics which could only be addressed with great difficulty in an experimental or empirical setup. We used the process-based forest model 4C to simulate inter-specific competition in mixed stands of Douglas-fir (Pseudotsuga menziesii) and Common beech (Fagus sylvatica) as well as Scots pine (Pinus sylvestris) and Sessile / Pedunculate oak (Quercus petraea and Quercus robur) under a) historical climate for model verification and b) under climate change scenario realizations of the climate model STAR 2.0 in Brandenburg, Germany. Some of the climate change scenario realizations feature a substantially drier and warmer summer climate which decreases the climatic water balance during the growing season. We assumed species-specific fine root biomass distributions which feature broadleaved fine roots in deeper soil layers and coniferous fine roots in upper soil layers according to several root excavation studies from mixed stands. The stands themselves were constructed from yield tables of the contributing species. The model verification provided good results for the basal area predictions under the historical climate. Under climate change, the number of days when the tree water demand exceeded the soil water supply was higher for the coniferous species than for broadleaved species. Furthermore, after 45 simulation years the basal area

  20. Advances in experimental methods for root system architecture and root development

    Institute of Scientific and Technical Information of China (English)

    Jun-bang Wang; Xiu-juan Zhang; Chu Wu

    2015-01-01

    Plant roots play important roles in acquisition of water and nutrients, storage, anchoring, transport, and symbiosis with soil microorganisms, thus quantitative researches on root developmental processes are essential to understand root functions and root turnover in ecosystems, and at the same time such researches are the most difficult because roots are hidden underground. Therefore, how to investigate efficiently root functions and root dynamics is the core aspect in underground ecology. In this article, we reviewed some experimental methods used in root resear-ches on root development and root system architecture, and summarized the advantages and shortages of these meth-ods. Based on the analyses, we proposed three new ways to more understand root processes: (1) new experimental materials for root development; (2) a new observatory system comprised of multiple components, including many observatory windows installed in field, analysis software, and automatic data transport devices; (3) new techniques used to analyze quantitatively functional roots.

  1. Oak protein profile alterations upon root colonization by an ectomycorrhizal fungus

    DEFF Research Database (Denmark)

    Sebastiana, Mónica; Martins, Joana; Figueiredo, Andreia

    2017-01-01

    to ectomycorrhizae formation using a proteomics approach complemented by biochemical analysis of carbohydrate levels. Comparative proteome analysis between mycorrhizal and nonmycorrhizal cork oak plants revealed no differences at the foliar level. However, the protein profile of 34 unique oak proteins was altered...... accommodation in colonized roots are also suggested by the results. The suggested improvement in root capacity to take up nutrients accompanied by an increase of root biomass without apparent changes in aboveground biomass strongly re-enforces the potential of mycorrhizal inoculation to improve cork oak forest...

  2. Tree root systems and nutrient mobilization

    DEFF Research Database (Denmark)

    Boyle, Jim; Rob, Harrison; Raulund-Rasmussen, Karsten

    Roots mobilize nutrients via deep penetration and rhizosphere processes inducing weathering of primary minerals. These contribute to C transfer to soils and to tree nutrition. Assessments of these characteristics and processes of root systems are important for understanding long-term supplies...... some of the world’s most productive intensively managed forests, including Brazil and the Southeast and Pacifi c Northwest regions of the United States, have shown that root systems are often several meters in depth, and often extend deeper than soil is sampled. Large amounts of carbon are also...... sometimes stored at depth. Other recent studies on potential release of nutrients due to chemical weathering indicate the importance of root access to deep soil layers. Release profi les clearly indicate depletion in the top layers and a much higher potential in B and C horizons. Review of evaluations...

  3. Altered cell wall properties are responsible for ammonium-reduced aluminium accumulation in rice roots.

    Science.gov (United States)

    Wang, Wei; Zhao, Xue Qiang; Chen, Rong Fu; Dong, Xiao Ying; Lan, Ping; Ma, Jian Feng; Shen, Ren Fang

    2015-07-01

    The phytotoxicity of aluminium (Al) ions can be alleviated by ammonium (NH4(+)) in rice and this effect has been attributed to the decreased Al accumulation in the roots. Here, the effects of different nitrogen forms on cell wall properties were compared in two rice cultivars differing in Al tolerance. An in vitro Al-binding assay revealed that neither NH4(+) nor NO3(-) altered the Al-binding capacity of cell walls, which were extracted from plants not previously exposed to N sources. However, cell walls extracted from NH4(+)-supplied roots displayed lower Al-binding capacity than those from NO3(-)-supplied roots when grown in non-buffered solutions. Fourier-transform infrared microspectroscopy analysis revealed that, compared with NO3(-)-supplied roots, NH4(+)-supplied roots possessed fewer Al-binding groups (-OH and COO-) and lower contents of pectin and hemicellulose. However, when grown in pH-buffered solutions, these differences in the cell wall properties were not observed. Further analysis showed that the Al-binding capacity and properties of cell walls were also altered by pHs alone. Taken together, our results indicate that the NH4(+)-reduced Al accumulation was attributed to the altered cell wall properties triggered by pH decrease due to NH4(+) uptake rather than direct competition for the cell wall binding sites between Al(3+) and NH4(+).

  4. Modelling water uptake efficiency of root systems

    Science.gov (United States)

    Leitner, Daniel; Tron, Stefania; Schröder, Natalie; Bodner, Gernot; Javaux, Mathieu; Vanderborght, Jan; Vereecken, Harry; Schnepf, Andrea

    2016-04-01

    Water uptake is crucial for plant productivity. Trait based breeding for more water efficient crops will enable a sustainable agricultural management under specific pedoclimatic conditions, and can increase drought resistance of plants. Mathematical modelling can be used to find suitable root system traits for better water uptake efficiency defined as amount of water taken up per unit of root biomass. This approach requires large simulation times and large number of simulation runs, since we test different root systems under different pedoclimatic conditions. In this work, we model water movement by the 1-dimensional Richards equation with the soil hydraulic properties described according to the van Genuchten model. Climatic conditions serve as the upper boundary condition. The root system grows during the simulation period and water uptake is calculated via a sink term (after Tron et al. 2015). The goal of this work is to compare different free software tools based on different numerical schemes to solve the model. We compare implementations using DUMUX (based on finite volumes), Hydrus 1D (based on finite elements), and a Matlab implementation of Van Dam, J. C., & Feddes 2000 (based on finite differences). We analyse the methods for accuracy, speed and flexibility. Using this model case study, we can clearly show the impact of various root system traits on water uptake efficiency. Furthermore, we can quantify frequent simplifications that are introduced in the modelling step like considering a static root system instead of a growing one, or considering a sink term based on root density instead of considering the full root hydraulic model (Javaux et al. 2008). References Tron, S., Bodner, G., Laio, F., Ridolfi, L., & Leitner, D. (2015). Can diversity in root architecture explain plant water use efficiency? A modeling study. Ecological modelling, 312, 200-210. Van Dam, J. C., & Feddes, R. A. (2000). Numerical simulation of infiltration, evaporation and shallow

  5. Arabidopsis: an adequate model for dicot root systems?

    OpenAIRE

    Zobel, Richard W.

    2016-01-01

    The Arabidopsis root system is frequently considered to have only three classes of root: primary, lateral, and adventitious. Research with other plant species has suggested up to 8 different developmental/functional classes of root for a given plant root system. If Arabidopsis has only three classes of root, it may not be an adequate model for eudicot plant root systems. Recent research, however, can be interpreted to suggest that pre-flowering Arabidopsis does have at least five (5) of th...

  6. Arabidopsis: An Adequate Model for Dicot Root Systems?

    OpenAIRE

    Zobel, Richard W.

    2016-01-01

    The Arabidopsis root system is frequently considered to have only three classes of root: primary, lateral, and adventitious. Research with other plant species has suggested up to eight different developmental/functional classes of root for a given plant root system. If Arabidopsis has only three classes of root, it may not be an adequate model for eudicot plant root systems. Recent research, however, can be interpreted to suggest that pre-flowering Arabidopsis does have at least five (5) of t...

  7. Oak protein profile alterations upon root colonization by an ectomycorrhizal fungus.

    Science.gov (United States)

    Sebastiana, Mónica; Martins, Joana; Figueiredo, Andreia; Monteiro, Filipa; Sardans, Jordi; Peñuelas, Josep; Silva, Anabela; Roepstorff, Peter; Pais, Maria Salomé; Coelho, Ana Varela

    2017-02-01

    An increased knowledge on the real impacts of ectomycorrhizal symbiosis in forest species is needed to optimize forest sustainable productivity and thus to improve forest services and their capacity to act as carbon sinks. In this study, we investigated the response of an oak species to ectomycorrhizae formation using a proteomics approach complemented by biochemical analysis of carbohydrate levels. Comparative proteome analysis between mycorrhizal and nonmycorrhizal cork oak plants revealed no differences at the foliar level. However, the protein profile of 34 unique oak proteins was altered in the roots. Consistent with the results of the biochemical analysis, the proteome analysis of the mycorrhizal roots suggests a decreasing utilization of sucrose for the metabolic activity of mycorrhizal roots which is consistent with an increased allocation of carbohydrates from the plant to the fungus in order to sustain the symbiosis. In addition, a promotion of protein unfolding mechanisms, attenuation of defense reactions, increased nutrient mobilization from the plant-fungus interface (N and P), as well as cytoskeleton rearrangements and induction of plant cell wall loosening for fungal root accommodation in colonized roots are also suggested by the results. The suggested improvement in root capacity to take up nutrients accompanied by an increase of root biomass without apparent changes in aboveground biomass strongly re-enforces the potential of mycorrhizal inoculation to improve cork oak forest resistance capacity to cope with coming climate change.

  8. Experimental geobiology links evolutionary intensification of rooting systems and weathering

    Science.gov (United States)

    Quirk, Joe; Beerling, David; Leake, Jonathan

    2016-04-01

    The evolution of mycorrhizal fungi in partnership with early land plants over 440 million years ago led to the greening of the continents by plants of increasing biomass, rooting depth, nutrient demand and capacity to alter soil minerals, culminating in modern forested ecosystems. The later co-evolution of trees and rooting systems with arbuscular mycorrhizal (AM) fungi, together driving the biogeochemical cycling of elements and weathering of minerals in soil to meet subsequent increased phosphorus demands is thought to constitute one the most important biotic feedbacks on the geochemical carbon cycle to emerge during the Phanerozoic, and fundamentally rests on the intensifying effect of trees and their root-associating mycorrhizal fungal partners on mineral weathering. Here I present experimental and field evidence linking these evolutionary events to a mechanistic framework whereby: (1) as plants evolved in stature, biomass, and rooting depth, their mycorrhizal fungal partnerships received increasing amounts of plant photosynthate; (2) this enabled intensification of plant-driven fungal weathering of rocks to release growth-limiting nutrients; (3) in turn, this increased land-to-ocean export of Ca and P and enhanced ocean carbonate precipitation impacting the global carbon cycle and biosphere-geosphere-ocean-atmosphere interactions over the past 410 Ma. Our findings support an over-arching hypothesis that evolution has selected plant and mycorrhizal partnerships that have intensified mineral weathering and altered global biogeochemical cycles.

  9. Roots Air Management System with Integrated Expander

    Energy Technology Data Exchange (ETDEWEB)

    Stretch, Dale [Eaton Corporation, Menomonee Falls, WI (United States); Wright, Brad [Eaton Corporation, Menomonee Falls, WI (United States); Fortini, Matt [Eaton Corporation, Menomonee Falls, WI (United States); Fink, Neal [Ballard Power Systems, Burnaby, BC (Canada); Ramadan, Bassem [Kettering Univ., Flint, MI (United States); Eybergen, William [Eaton Corporation, Menomonee Falls, WI (United States)

    2016-07-06

    PEM fuel cells remain an emerging technology in the vehicle market with several cost and reliability challenges that must be overcome in order to increase market penetration and acceptance. The DOE has identified the lack of a cost effective, reliable, and efficient air supply system that meets the operational requirements of a pressurized PEM 80kW fuel cell as one of the major technological barriers that must be overcome. This project leveraged Roots positive displacement development advancements and demonstrated an efficient and low cost fuel cell air management system. Eaton built upon its P-Series Roots positive displacement design and shifted the peak efficiency making it ideal for use on an 80kW PEM stack. Advantages to this solution include: • Lower speed of the Roots device eliminates complex air bearings present on other systems. • Broad efficiency map of Roots based systems provides an overall higher drive cycle fuel economy. • Core Roots technology has been developed and validated for other transportation applications. Eaton modified their novel R340 Twin Vortices Series (TVS) Roots-type supercharger for this application. The TVS delivers more power and better fuel economy in a smaller package as compared to other supercharger technologies. By properly matching the helix angle with the rotor’s physical aspect ratio, the supercharger’s peak efficiency can be moved to the operating range where it is most beneficial for the application. The compressor was designed to meet the 90 g/s flow at a pressure ratio of 2.5, similar in design to the P-Series 340. A net shape plastic expander housing with integrated motor and compressor was developed to significantly reduce the cost of the system. This integrated design reduced part count by incorporating an overhung expander and motor rotors into the design such that only four bearings and two shafts were utilized.

  10. Tree root systems and nutrient mobilization

    DEFF Research Database (Denmark)

    Boyle, Jim; Rob, Harrison; Raulund-Rasmussen, Karsten;

    Roots mobilize nutrients via deep penetration and rhizosphere processes inducing weathering of primary minerals. These contribute to C transfer to soils and to tree nutrition. Assessments of these characteristics and processes of root systems are important for understanding long-term supplies...... of nutrient elements essential for forest growth and resilience. Research and techniques have signifi cantly advanced since Olof Tamm’s 1934 base mineral index for Swedish forest soils, and basic nutrient budget estimates for whole-tree harvesting systems of the 1970s. Recent research in areas that include...... sometimes stored at depth. Other recent studies on potential release of nutrients due to chemical weathering indicate the importance of root access to deep soil layers. Release profi les clearly indicate depletion in the top layers and a much higher potential in B and C horizons. Review of evaluations...

  11. Del Pezzo Moduli via Root Systems

    NARCIS (Netherlands)

    Colombo, E.; van Geemen, B.; Looijenga, E.J.N.

    2010-01-01

    Coble defined in his 1929 treatise invariants for cubic surfaces and quartic curves. We reinterpret these in terms of the root systems of type E6 and E7 that are naturally associated to these varieties, thereby giving some of his results a more intrinsic treatment. Our discussion is uniform for all

  12. Seasonal changes of whole root system conductance by a drought-tolerant grape root system.

    Science.gov (United States)

    Alsina, Maria Mar; Smart, David R; Bauerle, Taryn; de Herralde, Felicidad; Biel, Carme; Stockert, Christine; Negron, Claudia; Save, Robert

    2011-01-01

    The role of root systems in drought tolerance is a subject of very limited information compared with above-ground responses. Adjustments to the ability of roots to supply water relative to shoot transpiration demand is proposed as a major means for woody perennial plants to tolerate drought, and is often expressed as changes in the ratios of leaf to root area (A(L):A(R)). Seasonal root proliferation in a directed manner could increase the water supply function of roots independent of total root area (A(R)) and represents a mechanism whereby water supply to demand could be increased. To address this issue, seasonal root proliferation, stomatal conductance (g(s)) and whole root system hydraulic conductance (k(r)) were investigated for a drought-tolerant grape root system (Vitis berlandieri×V. rupestris cv. 1103P) and a non-drought-tolerant root system (Vitis riparia×V. rupestris cv. 101-14Mgt), upon which had been grafted the same drought-sensitive clone of Vitis vinifera cv. Merlot. Leaf water potentials (ψ(L)) for Merlot grafted onto the 1103P root system (-0.91±0.02 MPa) were +0.15 MPa higher than Merlot on 101-14Mgt (-1.06±0.03 MPa) during spring, but dropped by approximately -0.4 MPa from spring to autumn, and were significantly lower by -0.15 MPa (-1.43±0.02 MPa) than for Merlot on 101-14Mgt (at -1.28±0.02 MPa). Surprisingly, g(s) of Merlot on the drought-tolerant root system (1103P) was less down-regulated and canopies maintained evaporative fluxes ranging from 35-20 mmol vine(-1) s(-1) during the diurnal peak from spring to autumn, respectively, three times greater than those measured for Merlot on the drought-sensitive rootstock 101-14Mgt. The drought-tolerant root system grew more roots at depth during the warm summer dry period, and the whole root system conductance (k(r)) increased from 0.004 to 0.009 kg MPa(-1) s(-1) during that same time period. The changes in k(r) could not be explained by xylem anatomy or conductivity changes of individual root

  13. Seasonal changes of whole root system conductance by a drought-tolerant grape root system

    Science.gov (United States)

    Alsina, Maria Mar; Smart, David R.; Bauerle, Taryn; de Herralde, Felicidad; Biel, Carme; Stockert, Christine; Negron, Claudia; Save, Robert

    2011-01-01

    The role of root systems in drought tolerance is a subject of very limited information compared with above-ground responses. Adjustments to the ability of roots to supply water relative to shoot transpiration demand is proposed as a major means for woody perennial plants to tolerate drought, and is often expressed as changes in the ratios of leaf to root area (AL:AR). Seasonal root proliferation in a directed manner could increase the water supply function of roots independent of total root area (AR) and represents a mechanism whereby water supply to demand could be increased. To address this issue, seasonal root proliferation, stomatal conductance (gs) and whole root system hydraulic conductance (kr) were investigated for a drought-tolerant grape root system (Vitis berlandieri×V. rupestris cv. 1103P) and a non-drought-tolerant root system (Vitis riparia×V. rupestris cv. 101-14Mgt), upon which had been grafted the same drought-sensitive clone of Vitis vinifera cv. Merlot. Leaf water potentials (ψL) for Merlot grafted onto the 1103P root system (–0.91±0.02 MPa) were +0.15 MPa higher than Merlot on 101-14Mgt (–1.06±0.03 MPa) during spring, but dropped by approximately –0.4 MPa from spring to autumn, and were significantly lower by –0.15 MPa (–1.43±0.02 MPa) than for Merlot on 101-14Mgt (at –1.28±0.02 MPa). Surprisingly, gs of Merlot on the drought-tolerant root system (1103P) was less down-regulated and canopies maintained evaporative fluxes ranging from 35–20 mmol vine−1 s−1 during the diurnal peak from spring to autumn, respectively, three times greater than those measured for Merlot on the drought-sensitive rootstock 101-14Mgt. The drought-tolerant root system grew more roots at depth during the warm summer dry period, and the whole root system conductance (kr) increased from 0.004 to 0.009 kg MPa−1 s−1 during that same time period. The changes in kr could not be explained by xylem anatomy or conductivity changes of individual root

  14. GiA Roots: software for the high throughput analysis of plant root system architecture

    OpenAIRE

    Galkovskyi Taras; Mileyko Yuriy; Bucksch Alexander; Moore Brad; Symonova Olga; Price Charles A; Topp Christopher N; Iyer-Pascuzzi Anjali S; Zurek Paul R; Fang Suqin; Harer John; Benfey Philip N; Weitz Joshua S

    2012-01-01

    Abstract Background Characterizing root system architecture (RSA) is essential to understanding the development and function of vascular plants. Identifying RSA-associated genes also represents an underexplored opportunity for crop improvement. Software tools are needed to accelerate the pace at which quantitative traits of RSA are estimated from images of root networks. Results We have developed GiA Roots (General Image Analysis of Roots), a semi-automated software tool designed specifically...

  15. Bessel functions for root systems via the trigonometric setting

    DEFF Research Database (Denmark)

    Ørsted, Bent; Said, S.B.

    2005-01-01

    In this paper, we study generalized Bessel functions related to root systems and give explicit formulas in several cases.......In this paper, we study generalized Bessel functions related to root systems and give explicit formulas in several cases....

  16. Piriformospora indica root colonization triggers local and systemic root responses and inhibits secondary colonization of distal roots.

    Directory of Open Access Journals (Sweden)

    Lorenzo Pedrotti

    Full Text Available Piriformosporaindica is a basidiomycete fungus colonizing roots of a wide range of higher plants, including crop plants and the model plant Arabidopsis thaliana. Previous studies have shown that P. indica improves growth, and enhances systemic pathogen resistance in leaves of host plants. To investigate systemic effects within the root system, we established a hydroponic split-root cultivation system for Arabidopsis. Using quantitative real-time PCR, we show that initial P. indica colonization triggers a local, transient response of several defense-related transcripts, of which some were also induced in shoots and in distal, non-colonized roots of the same plant. Systemic effects on distal roots included the inhibition of secondary P. indica colonization. Faster and stronger induction of defense-related transcripts during secondary inoculation revealed that a P. indica pretreatment triggers root-wide priming of defense responses, which could cause the observed reduction of secondary colonization levels. Secondary P. indica colonization also induced defense responses in distant, already colonized parts of the root. Endophytic fungi therefore trigger a spatially specific response in directly colonized and in systemic root tissues of host plants.

  17. On Integrable Roots in Split Lie Triple Systems

    Institute of Scientific and Technical Information of China (English)

    A.J.CALDER(O)N MART(I)N

    2009-01-01

    We focus on the notion of an integrable root in the framework of split Lie triple systems T with a coherent 0-root space. As a main result, it is shown that if T has all its nonzero roots integrable, then its standard embedding is a split Lie algebra having all its nonzero roots integrable. As a consequence, a local finiteness theorem for split Lie triple systems, saying that whenever all nonzero roots of T are integrable then T is locally finite, is stated. Finally, a classification theorem for split simple Lie triple systems having all its nonzero roots integrable is given.

  18. A Physiological and Behavioral Mechanism for Leaf Herbivore-Induced Systemic Root Resistance.

    Science.gov (United States)

    Erb, Matthias; Robert, Christelle A M; Marti, Guillaume; Lu, Jing; Doyen, Gwladys R; Villard, Neil; Barrière, Yves; French, B Wade; Wolfender, Jean-Luc; Turlings, Ted C J; Gershenzon, Jonathan

    2015-12-01

    Indirect plant-mediated interactions between herbivores are important drivers of community composition in terrestrial ecosystems. Among the most striking examples are the strong indirect interactions between spatially separated leaf- and root-feeding insects sharing a host plant. Although leaf feeders generally reduce the performance of root herbivores, little is known about the underlying systemic changes in root physiology and the associated behavioral responses of the root feeders. We investigated the consequences of maize (Zea mays) leaf infestation by Spodoptera littoralis caterpillars for the root-feeding larvae of the beetle Diabrotica virgifera virgifera, a major pest of maize. D. virgifera strongly avoided leaf-infested plants by recognizing systemic changes in soluble root components. The avoidance response occurred within 12 h and was induced by real and mimicked herbivory, but not wounding alone. Roots of leaf-infested plants showed altered patterns in soluble free and soluble conjugated phenolic acids. Biochemical inhibition and genetic manipulation of phenolic acid biosynthesis led to a complete disappearance of the avoidance response of D. virgifera. Furthermore, bioactivity-guided fractionation revealed a direct link between the avoidance response of D. virgifera and changes in soluble conjugated phenolic acids in the roots of leaf-attacked plants. Our study provides a physiological mechanism for a behavioral pattern that explains the negative effect of leaf attack on a root-feeding insect. Furthermore, it opens up the possibility to control D. virgifera in the field by genetically mimicking leaf herbivore-induced changes in root phenylpropanoid patterns.

  19. An L-system model for root system mycorrhization

    Science.gov (United States)

    Schnepf, Andrea; Schweiger, Peter; Jansa, Jan; Leitner, Daniel

    2014-05-01

    Mineral phosphate fertilisers are a non-renewable resource; rock phosphate reserves are estimated to be depleted in 50 to 100 years. In order to prevent a severe phosphate crisis in the 21st century, there is a need to decrease agricultural inputs such as P fertilisers by making use of plant mechanisms that increase P acquisition efficiency. Most plants establish mycorrhizal symbiosis as an adaptation to increase/economize their P acquisition from the soil. However, there is a great functional diversity in P acquisition mechanisms among different fungal species that colonize the roots (Thonar et al. 2011), and the composition of mycorrhizal community is known to depend strongly on agricultural management practices. Thus, the agroecosystem management may substantially affect the mycorrhizal functioning and also the use of P fertilizers. To date, it is still difficult to quantify the potential input savings for the agricultural crops through manipulation of their symbiotic microbiome, mainly due to lack of mechanistic understanding of P uptake dynamics by the fungal hyphae. In a first attempt, Schnepf et al. (2008b) have used mathematical modelling to show on the single root scale how different fungal growth pattern influence root P uptake. However, their approach was limited by the fact that it was restricted to the scale of a single root. The goal of this work is to advance the dynamic, three-dimensional root architecture model of Leitner et al. (2010) to include root system infection with arbuscular mycorrhizal fungi and growth of external mycelium. The root system infection model assumes that there is an average probability of infection (primary infection), that the probability of infection of a new root segment immediately adjacent to an existing infection is much higher than the average (secondary infection), that infected root segments have entry points that are the link between internal and external mycelium, that only uninfected root segments are susceptible

  20. Phosphate-dependent root system architecture responses to salt stress

    NARCIS (Netherlands)

    Kawa, D.; Julkowska, M.M.; Montero Sommerfeld, H.; ter Horst, A.; Haring, M.A.; Testerink, C.

    2016-01-01

    Nutrient availability and salinity of the soil affect growth and development of plant roots. Here, we describe how phosphate availability affects root system architecture (RSA) of Arabidopsis and how phosphate levels modulate responses of the root to salt stress. Phosphate (Pi) starvation reduced ma

  1. Inflammation and immune system alterations in frailty.

    Science.gov (United States)

    Yao, Xu; Li, Huifen; Leng, Sean X

    2011-02-01

    Frailty is an important geriatric syndrome characterized by multisystem dysregulation. Substantial evidence suggests heightened inflammatory state and significant immune system alterations in frailty. A heightened inflammatory state is marked by increases in levels of inflammatory molecules (interleukin 6 and C-reactive protein) and counts of white blood cell and its subpopulations, which may play an important role in the pathogenesis of frailty, directly or through its detrimental influence on other physiologic systems. Alterations in the innate immune system include decreased proliferation of the peripheral blood mononuclear cells and upregulated monocytic expression of specific stress-responsive inflammatory pathway genes. In the adaptive immune system, although little information is available about potential B-cell changes, significant alterations have been identified in the T-cell compartment, including increased counts of CD8+, CD8+CD28-, CCR5+T cells, above and beyond age-related senescent immune remodeling.

  2. Root system markup language: toward a unified root architecture description language.

    Science.gov (United States)

    Lobet, Guillaume; Pound, Michael P; Diener, Julien; Pradal, Christophe; Draye, Xavier; Godin, Christophe; Javaux, Mathieu; Leitner, Daniel; Meunier, Félicien; Nacry, Philippe; Pridmore, Tony P; Schnepf, Andrea

    2015-03-01

    The number of image analysis tools supporting the extraction of architectural features of root systems has increased in recent years. These tools offer a handy set of complementary facilities, yet it is widely accepted that none of these software tools is able to extract in an efficient way the growing array of static and dynamic features for different types of images and species. We describe the Root System Markup Language (RSML), which has been designed to overcome two major challenges: (1) to enable portability of root architecture data between different software tools in an easy and interoperable manner, allowing seamless collaborative work; and (2) to provide a standard format upon which to base central repositories that will soon arise following the expanding worldwide root phenotyping effort. RSML follows the XML standard to store two- or three-dimensional image metadata, plant and root properties and geometries, continuous functions along individual root paths, and a suite of annotations at the image, plant, or root scale at one or several time points. Plant ontologies are used to describe botanical entities that are relevant at the scale of root system architecture. An XML schema describes the features and constraints of RSML, and open-source packages have been developed in several languages (R, Excel, Java, Python, and C#) to enable researchers to integrate RSML files into popular research workflow.

  3. The tomato res mutant which accumulates JA in roots in non-stressed conditions restores cell structure alterations under salinity.

    Science.gov (United States)

    Garcia-Abellan, José O; Fernandez-Garcia, Nieves; Lopez-Berenguer, Carmen; Egea, Isabel; Flores, Francisco B; Angosto, Trinidad; Capel, Juan; Lozano, Rafael; Pineda, Benito; Moreno, Vicente; Olmos, Enrique; Bolarin, Maria C

    2015-11-01

    Jasmonic acid (JA) regulates a wide spectrum of plant biological processes, from plant development to stress defense responses. The role of JA in plant response to salt stress is scarcely known, and even less known is the specific response in root, the main plant organ responsible for ionic uptake and transport to the shoot. Here we report the characterization of the first tomato (Solanum lycopersicum) mutant, named res (restored cell structure by salinity), that accumulates JA in roots prior to exposure to stress. The res tomato mutant presented remarkable growth inhibition and displayed important morphological alterations and cellular disorganization in roots and leaves under control conditions, while these alterations disappeared when the res mutant plants were grown under salt stress. Reciprocal grafting between res and wild type (WT) (tomato cv. Moneymaker) indicated that the main organ responsible for the development of alterations was the root. The JA-signaling pathway is activated in res roots prior to stress, with transcripts levels being even higher in control condition than in salinity. Future studies on this mutant will provide significant advances in the knowledge of JA role in root in salt-stress tolerance response, as well as in the energy trade-off between plant growth and response to stress.

  4. Altered susceptibility to infection by Sinorhizobium meliloti and Nectria haematococca in alfalfa roots with altered cell cycle.

    Science.gov (United States)

    Woo, H-H; Hirsch, A M; Hawes, M C

    2004-07-01

    Most infections of plant roots are initiated in the region of elongation; the mechanism for this tissue-specific localization pattern is unknown. In alfalfa expressing PsUGT1 antisense mRNA under the control of the cauliflower mosaic virus (CaMV) 35S promoter, the cell cycle in roots is completed in 48 h instead of 24 h, and border cell number is decreased by more than 99%. These plants were found to exhibit increased root-tip infection by a fungal pathogen and reduced nodule formation by a bacterial symbiont. Thus, the frequency of infection in the region of elongation by Nectria haematocca was unaffected, but infection of the root tip was increased by more than 90%; early stages of Sinorhizobium meliloti infection and nodule morphology were normal, but the frequency of nodulation was fourfold lower than in wild-type roots.

  5. Drought and root herbivory interact to alter the response of above-ground parasitoids to aphid infested plants and associated plant volatile signals.

    Directory of Open Access Journals (Sweden)

    Muhammad Tariq

    Full Text Available Multitrophic interactions are likely to be altered by climate change but there is little empirical evidence relating the responses of herbivores and parasitoids to abiotic factors. Here we investigated the effects of drought on an above/below-ground system comprising a generalist and a specialist aphid species (foliar herbivores, their parasitoids, and a dipteran species (root herbivore.We tested the hypotheses that: (1 high levels of drought stress and below-ground herbivory interact to reduce the performance of parasitoids developing in aphids; (2 drought stress and root herbivory change the profile of volatile organic chemicals (VOCs emitted by the host plant; (3 parasitoids avoid ovipositing in aphids feeding on plants under drought stress and root herbivory. We examined the effect of drought, with and without root herbivory, on the olfactory response of parasitoids (preference, plant volatile emissions, parasitism success (performance, and the effect of drought on root herbivory. Under drought, percentage parasitism of aphids was reduced by about 40-55% compared with well watered plants. There was a significant interaction between drought and root herbivory on the efficacy of the two parasitoid species, drought stress partially reversing the negative effect of root herbivory on percent parasitism. In the absence of drought, root herbivory significantly reduced the performance (e.g. fecundity of both parasitoid species developing in foliar herbivores. Plant emissions of VOCs were reduced by drought and root herbivores, and in olfactometer experiments parasitoids preferred the odour from well-watered plants compared with other treatments. The present work demonstrates that drought stress can change the outcome of interactions between herbivores feeding above- and below-ground and their parasitoids, mediated by changes in the chemical signals from plants to parasitoids. This provides a new insight into how the structure of terrestrial

  6. Genetic and chemical reductions in protein phosphatase activity alter auxin transport, gravity response, and lateral root growth

    Science.gov (United States)

    Rashotte, A. M.; DeLong, A.; Muday, G. K.; Brown, C. S. (Principal Investigator)

    2001-01-01

    Auxin transport is required for important growth and developmental processes in plants, including gravity response and lateral root growth. Several lines of evidence suggest that reversible protein phosphorylation regulates auxin transport. Arabidopsis rcn1 mutant seedlings exhibit reduced protein phosphatase 2A activity and defects in differential cell elongation. Here we report that reduced phosphatase activity alters auxin transport and dependent physiological processes in the seedling root. Root basipetal transport was increased in rcn1 or phosphatase inhibitor-treated seedlings but showed normal sensitivity to the auxin transport inhibitor naphthylphthalamic acid (NPA). Phosphatase inhibition reduced root gravity response and delayed the establishment of differential auxin-induced gene expression across a gravity-stimulated root tip. An NPA treatment that reduced basipetal transport in rcn1 and cantharidin-treated wild-type plants also restored a normal gravity response and asymmetric auxin-induced gene expression, indicating that increased basipetal auxin transport impedes gravitropism. Increased auxin transport in rcn1 or phosphatase inhibitor-treated seedlings did not require the AGR1/EIR1/PIN2/WAV6 or AUX1 gene products. In contrast to basipetal transport, root acropetal transport was normal in phosphatase-inhibited seedlings in the absence of NPA, although it showed reduced NPA sensitivity. Lateral root growth also exhibited reduced NPA sensitivity in rcn1 seedlings, consistent with acropetal transport controlling lateral root growth. These results support the role of protein phosphorylation in regulating auxin transport and suggest that the acropetal and basipetal auxin transport streams are differentially regulated.

  7. On Split Lie Algebras with Symmetric Root Systems

    Indian Academy of Sciences (India)

    Antonio J Calderón Martín

    2008-08-01

    We develop techniques of connections of roots for split Lie algebras with symmetric root systems. We show that any of such algebras is of the form $L=\\mathcal{U}+\\sum_j I_j$ with $\\mathcal{U}$ a subspace of the abelian Lie algebra and any $I_j$ a well described ideal of , satisfying $[I_j,I_k]=0$ if $j≠ k$. Under certain conditions, the simplicity of is characterized and it is shown that is the direct sum of the family of its minimal ideals, each one being a simple split Lie algebra with a symmetric root system and having all its nonzero roots connected.

  8. Phosphate-dependent root system architecture responses to salt stress

    KAUST Repository

    Kawa, Dorota

    2016-05-20

    Nutrient availability and salinity of the soil affect growth and development of plant roots. Here, we describe how phosphate availability affects root system architecture (RSA) of Arabidopsis and how phosphate levels modulate responses of the root to salt stress. Phosphate (Pi) starvation reduced main root length and increased the number of lateral roots of Arabidopsis Col-0 seedlings. In combination with salt, low Pi dampened the inhibiting effect of mild salt stress (75mM) on all measured RSA components. At higher NaCl concentrations, the Pi deprivation response prevailed over the salt stress only for lateral root elongation. The Pi deprivation response of lateral roots appeared to be oppositely affected by abscisic acid (ABA) signaling compared to the salt stress response. Natural variation in the response to the combination treatment of salt and Pi starvation within 330 Arabidopsis accessions could be grouped into four response patterns. When exposed to double stress, in general lateral roots prioritized responses to salt, while the effect on main root traits was additive. Interestingly, these patterns were not identical for all accessions studied and multiple strategies to integrate the signals from Pi deprivation and salinity were identified. By Genome Wide Association Mapping (GWAS) 13 genomic loci were identified as putative factors integrating responses to salt stress and Pi starvation. From our experiments, we conclude that Pi starvation interferes with salt responses mainly at the level of lateral roots and that large natural variation exists in the available genetic repertoire of accessions to handle the combination of stresses.

  9. Sap flow measurements of lateral tree roots in agroforestry systems.

    Science.gov (United States)

    Lott, J. E.; Khan, A. A. H.; Ong, C. K.; Black, C. R.

    1996-01-01

    Successful extension of agroforestry to areas of the semi-arid tropics where deep reserves of water exist requires that the tree species be complementary to the associated crops in their use of water within the crop rooting zone. However, it is difficult to identify trees suitable for dryland agroforestry because most existing techniques for determining water uptake by roots cannot distinguish between absorption by tree and crop roots. We describe a method for measuring sap flow through lateral roots using constant temperature heat balance gauges, and the application of this method in a study of complementarity of water use in agroforestry systems containing Grevillea robusta A. Cunn. Sap flow gauges were attached to the trunks and roots of Grevillea with minimum disturbance to the soil. Thermal energy emanating from the soil adversely affected the accuracy of sap flow gauges attached to the roots, with the result that the uncorrected values were up to eightfold greater than the true water uptake determined gravimetrically. This overestimation was eliminated by using a calibration method in which nonconducting excised root segments, with sap flow gauges attached, were placed adjacent to the live roots. The power consumption and temperature differentials of the excised roots were used to correct for external sources and internal losses of heat within the paired live root. The fraction of the total sap flow through individual trees supplied by the lateral roots varied greatly between trees of similar canopy size. Excision of all lateral roots, except for one to which a heat balance gauge was attached, did not significantly increase sap flow through the intact root, suggesting that it was functioning at near maximum capacity.

  10. Properties of Plasma Membrane from Pea Root Seedlings under Altered Gravity

    Science.gov (United States)

    Klymchuk, D.; Baranenko, V.; Vorobyova, T. V.; Kurylenko, I.; Chyzhykova, O.; Dubovoy, V.

    In this study, the properties of pea (Pisum sativum L.) plasma membrane were examined to determine how the membrane structure and functions are regulated in response to clinorotation (2 rev/min) conditions. Membrane preparations enriched by plasma membrane vesicles were obtained by aqueous two-phase partitioning from 6-day seedling roots. The specific characteristics of H^+-ATPase, lípid composition and peroxidation intensity as well as fluidity of lipid bilayer were analysed. ATP hydrolytic activity was inhibited by ortovanadate and was insensitive to aside and nitrate in sealed plasma membrane vesicles isolated from both clinorotated and control seedlings. Plasma membrane vesicles from clinorotated seedlings in comparison to controls were characterised by increase in the total lipid/protein ratio, ATP hydrolytic activity and intensifying of lipid peroxidation. Sitosterol and campesterol were the predominant free sterol species. Clinorotated seedlings contained a slightly higher level of unsaturated fatty acid than controls. Plasma membrane vesicles were labelled with pyrene and fluorescence originating from monomeric (I_M) molecules and excimeric (I_E) aggregates were measured. The calculated I_E/I_M values were higher in clinorotated seedlings compared with controls reflecting the reduction in membrane microviscosity. The involvement of the changes in plasma membrane lipid content and composition, fluidity and H^+-ATPase activity in response of pea seedlings to altered gravity is discussed.

  11. Characterization of alfalfa populations contrasting for root system architecture (RSA)

    Science.gov (United States)

    The root system architecture affects the capacity for nutrient and water uptake thus impacting biomass yield production and may contribute to the persistence of perennial plants. The objectives of this study were to phenotype the roots of three alfalfa populations and identify differences between di...

  12. Parameterizing the soil - water - plant root system

    NARCIS (Netherlands)

    Feddes, R.A.; Raats, P.A.C.

    2004-01-01

    Root water uptake is described from the local scale, to the field scale and to the regional and global scales. The local macroscopic model can be incorporated in Soil-Plant-Atmosphere Continuum (SPAC) numerical models, like the SWAP, HYSWASOR, HYDRUS, ENVIRO-GRO and FUSSIM models. These SPAC models

  13. Plasticity of the Arabidopsis root system under nutrient deficiencies.

    Science.gov (United States)

    Gruber, Benjamin D; Giehl, Ricardo F H; Friedel, Swetlana; von Wirén, Nicolaus

    2013-09-01

    Plant roots show a particularly high variation in their morphological response to different nutrient deficiencies. Although such changes often determine the nutrient efficiency or stress tolerance of plants, it is surprising that a comprehensive and comparative analysis of root morphological responses to different nutrient deficiencies has not yet been conducted. Since one reason for this is an inherent difficulty in obtaining nutrient-deficient conditions in agar culture, we first identified conditions appropriate for producing nutrient-deficient plants on agar plates. Based on a careful selection of agar specifically for each nutrient being considered, we grew Arabidopsis (Arabidopsis thaliana) plants at four levels of deficiency for 12 nutrients and quantified seven root traits. In combination with measurements of biomass and elemental concentrations, we observed that the nutritional status and type of nutrient determined the extent and type of changes in root system architecture (RSA). The independent regulation of individual root traits further pointed to a differential sensitivity of root tissues to nutrient limitations. To capture the variation in RSA under different nutrient supplies, we used principal component analysis and developed a root plasticity chart representing the overall modulations in RSA under a given treatment. This systematic comparison of RSA responses to nutrient deficiencies provides a comprehensive view of the overall changes in root plasticity induced by the deficiency of single nutrients and provides a solid basis for the identification of nutrient-sensitive steps in the root developmental program.

  14. Artificial Root Exudate System (ARES): a field approach to simulate tree root exudation in soils

    Science.gov (United States)

    Lopez-Sangil, Luis; Estradera-Gumbau, Eduard; George, Charles; Sayer, Emma

    2016-04-01

    The exudation of labile solutes by fine roots represents an important strategy for plants to promote soil nutrient availability in terrestrial ecosystems. Compounds exuded by roots (mainly sugars, carboxylic and amino acids) provide energy to soil microbes, thus priming the mineralization of soil organic matter (SOM) and the consequent release of inorganic nutrients into the rhizosphere. Studies in several forest ecosystems suggest that tree root exudates represent 1 to 10% of the total photoassimilated C, with exudation rates increasing markedly under elevated CO2 scenarios. Despite their importance in ecosystem functioning, we know little about how tree root exudation affect soil carbon dynamics in situ. This is mainly because there has been no viable method to experimentally control inputs of root exudates at field scale. Here, I present a method to apply artificial root exudates below the soil surface in small field plots. The artificial root exudate system (ARES) consists of a water container with a mixture of labile carbon solutes (mimicking tree root exudate rates and composition), which feeds a system of drip-tips covering an area of 1 m2. The tips are evenly distributed every 20 cm and inserted 4-cm into the soil with minimal disturbance. The system is regulated by a mechanical timer, such that artificial root exudate solution can be applied at frequent, regular daily intervals. We tested ARES from April to September 2015 (growing season) within a leaf-litter manipulation experiment ongoing in temperate deciduous woodland in the UK. Soil respiration was measured monthly, and soil samples were taken at the end of the growing season for PLFA, enzymatic activity and nutrient analyses. First results show a very rapid mineralization of the root exudate compounds and, interestingly, long-term increases in SOM respiration, with negligible effects on soil moisture levels. Large positive priming effects (2.5-fold increase in soil respiration during the growing

  15. Optimising root system hydraulic architectures for water uptake

    Science.gov (United States)

    Meunier, Félicien; Couvreur, Valentin; Draye, Xavier; Javaux, Mathieu

    2015-04-01

    In this study we started from local hydraulic analysis of idealized root systems to develop a mathematical framework necessary for the understanding of global root systems behaviors. The underlying assumption of this study was that the plant is naturally optimised for the water uptake. The root system is thus a pipe network dedicated to the capture and transport of water. The main objective of the present research is to explain the fitness of major types of root architectures to their environment. In a first step, we developed links between local hydraulic properties and macroscopic parameters of (un)branched roots. The outcome of such an approach were functions of apparent conductance of entire root system and uptake distribution along the roots. We compared our development with some allometric scaling laws for the root water uptake: under the same simplifying assumptions we were able to obtain the same results and even to expand them to more physiological cases. Using empirical data of measured root conductance, we were also able to fit extremely well the data-set with this model. In a second stage we used generic architecture parameters and an existent root growth model to generate various types of root systems (from fibrous to tap). We combined both sides (hydraulic and architecture) then to maximize under a volume constraint either apparent conductance of root systems or the soil volume explored by active roots during the plant growth period. This approach has led to the sensitive parameters of the macroscopic parameters (conductance and location of the water uptake) of each single plant selected for this study. Scientific questions such as: "What is the optimal sowing density of a given hydraulic architecture ?" or "Which plant traits can we change to better explore the soil domain ?" can be also addressed with this approach: some potential applications are illustrated. The next (and ultimate phase) will be to validate our conclusions with real architectures

  16. STUDYING FOREST ROOT SYSTEMS - AN OVERVIEW OF METHODOLOGICAL PROBLEMS

    Science.gov (United States)

    The study of tree root systems is central to understanding forest ecosystem carbon and nutrient cycles, nutrient and water uptake, C allocation patterns by trees, soil microbial populations, adaptation of trees to stress, soil organic matter production, etc. Methodological probl...

  17. Does the Presence of Detached Root Border Cells of Zea mays Alter the Activity of the Pathogenic Nematode Meloidogyne incognita?

    Science.gov (United States)

    Rodger, S; Bengough, A G; Griffiths, B S; Stubbs, V; Young, I M

    2003-09-01

    ABSTRACT The root-knot nematode Meloidogyne incognita is a major pathogen of a range of important crops. Currently, control is typically achieved by the use of nematicides. However, recent work suggests that manipulating the ability of roots to slough off border cells, which then act as a decoy to the nematode, can significantly decrease damage to the roots. We investigated the attractiveness of border cells to M. incognita and the response of the nematode to border cells in close proximity. We found very limited attraction, in that nematodes did not preferentially alter direction to move toward the border cells, but a large and significant increase in nematode speed was observed once they were in the immediate vicinity of border cells. We discuss the results in the context of physical and biological mechanisms in relation to the control of pathogenic nematodes.

  18. Spatial distribution of nematodes in three banana ( Musa AAA) root parts considering two root thickness in three farm management systems

    Science.gov (United States)

    Araya, M.; De Waele, D.

    2004-10-01

    The spatial location of the banana ( Musa AAA) root parasitic nematodes within three root parts considering two root thickness was determined in three commercial farm management systems, which differ in weed and nematode management. Roots in each farm management system were classified in thick (>5 mm-d) and thin (1 ≤ 5 mm-d) roots. From each root type, the epidermis, the cortical parenchyma (CP) and the vascular cylinder (VC) were separated by fingernail, and nematodes were extracted by maceration of each root part. Independent of the farm management system, and for either root thickness, highest numbers of Radopholus similis per gram of root was found in the CP, followed by the epidermis and VC. The highest number of Helicotylencus spp., Pratylenchus spp. and the total nematode population per gram of root was found in the epidermis. Considering the number of nematodes per root part, the highest number of R. similis and total nematodes was located in the CP, while Helicotylenchus spp. and Pratylenchus spp. were concentrated in the epidermis. These patterns were approximately reproduced in the two root thickness and in the three farm management systems. This behavior suggests that injection of systemic nematicides into the plant pseudostem to replace the granular applications on surface soil might be promissory.

  19. Immune system alterations in amyotrophic lateral sclerosis

    DEFF Research Database (Denmark)

    Hovden, H; Frederiksen, J L; Pedersen, S W

    2013-01-01

    cells working together are necessary for the pathogenesis of the disease. Observed immune system alterations could indicate an active participation in this mechanism. Damaged motor neurons are able to activate microglia, astrocytes and the complement system, which further can influence each other...... give more insight into the disease. Markers from the classical complement pathway are elevated where its initiator C1q appears to derive primarily from motor neurons. Activated microglia and astrocytes are found in close proximity to dying motor neurons. Their activation status and proliferation......Amyotrophic lateral sclerosis is a disease of which the underlying cause and pathogenesis are unknown. Cumulatative data clearly indicates an active participation by the immune system in the disease. An increasingly recognized theory suggests a non-cell autonomous mechanism, meaning that multiple...

  20. Elevated CO2 alters root N uptake and C turnover in Larrea tridentata L

    Science.gov (United States)

    To examine the impact of elevated CO2 on root N uptake, soil N availability and the feedbacks between them, we quantified the effects of elevated CO2 and N additions on root N uptake and leaf C gain in Larrea tridentata seedlings grown in reconstituted Mojave Desert soils. After six months of growt...

  1. Organic fertilization alters the community composition of root associated fungi in Pisum sativum

    DEFF Research Database (Denmark)

    Yu, L.; Nicolaisen, M.; Ravnskov, S.;

    2013-01-01

    Organic fertilization is well known to affect individual functional groups of root associated fungi such as arbuscular mycorrhizal (AM) fungi and root pathogens, but limited information is available on the effect of organic fertilization at the fungal community composition level. The main objective...... of the present study was to examine the response of communities of root associated fungi in Pisum sativum to Protamylasse, an organic fertilizer used in pea production. Plants were grown in pots with field soil amended with four different levels of Protamylasse. 454 pyrosequencing was employed to examine......, the organic fertilizer Protamylasse clearly affects communities of root associated fungi, which seems to be linked to the life strategy of the different functional groups of root associated fungi. --------------------------------------------------------------------------------...

  2. Crop systems and plant roots can modify the soil water holding capacity

    Science.gov (United States)

    Doussan, Claude; Cousin, Isabelle; Berard, Annette; Chabbi, Abad; Legendre, Laurent; Czarnes, Sonia; Toussaint, Bruce; Ruy, Stéphane

    2015-04-01

    At the interface between atmosphere and deep sub-soil, the root zone plays a major role in regulating the flow of water between major compartments: groundwater / surface / atmosphere (drainage, runoff, evapotranspiration). This role of soil as regulator/control of water fluxes, but also as a supporting medium to plant growth, is strongly dependent on the hydric properties of the soil. In turn, the plant roots growing in the soil can change its structure; both in the plow layer and in the deeper horizons and, therefore, could change the soil properties, particularly hydric properties. Such root-related alteration of soil properties can be linked to direct effect of roots such as soil perforation during growth, aggregation of soil particles or indirect effects such as the release of exudates by roots that could modify the properties of water or of soil particles. On an another hand, the rhizosphere, the zone around roots influenced by the activity of root and associated microorganisms, could have a high influence on hydric properties, particularly the water retention. To test if crops and plant roots rhizosphere may have a significant effect on water retention, we conducted various experiment from laboratory to field scales. In the lab, we tested different soil and species for rhizospheric effect on soil water retention. Variation in available water content (AWC) between bulk and rhizospheric soil varied from non-significant to a significant increase (to about 16% increase) depending on plant species and soil type. In the field, the alteration of water retention by root systems was tested in different pedological settings for a Maize crop inoculated or not with the bacteria Azospirillum spp., known to alter root structure, growth and morphology. Again, a range of variation in AWC was evidenced, with significant increase (~30%) in some soil types, but more linked to innoculated/non-innoculated plants rather than to a difference between rhizospheric and bulk soil

  3. Glaucoma alters the circadian timing system.

    Directory of Open Access Journals (Sweden)

    Elise Drouyer

    Full Text Available Glaucoma is a widespread ocular disease and major cause of blindness characterized by progressive, irreversible damage of the optic nerve. Although the degenerative loss of retinal ganglion cells (RGC and visual deficits associated with glaucoma have been extensively studied, we hypothesize that glaucoma will also lead to alteration of the circadian timing system. Circadian and non-visual responses to light are mediated by a specialized subset of melanopsin expressing RGCs that provide photic input to mammalian endogenous clock in the suprachiasmatic nucleus (SCN. In order to explore the molecular, anatomical and functional consequences of glaucoma we used a rodent model of chronic ocular hypertension, a primary causal factor of the pathology. Quantitative analysis of retinal projections using sensitive anterograde tracing demonstrates a significant reduction (approximately 50-70% of RGC axon terminals in all visual and non-visual structures and notably in the SCN. The capacity of glaucomatous rats to entrain to light was challenged by exposure to successive shifts of the light dark (LD cycle associated with step-wise decreases in light intensity. Although glaucomatous rats are able to entrain their locomotor activity to the LD cycle at all light levels, they require more time to re-adjust to a shifted LD cycle and show significantly greater variability in activity onsets in comparison with normal rats. Quantitative PCR reveals the novel finding that melanopsin as well as rod and cone opsin mRNAs are significantly reduced in glaucomatous retinas. Our findings demonstrate that glaucoma impacts on all these aspects of the circadian timing system. In light of these results, the classical view of glaucoma as pathology unique to the visual system should be extended to include anatomical and functional alterations of the circadian timing system.

  4. KATP channel subunits in rat dorsal root ganglia: alterations by painful axotomy

    Directory of Open Access Journals (Sweden)

    Gemes Geza

    2010-01-01

    Full Text Available Abstract Background ATP-sensitive potassium (KATP channels in neurons mediate neuroprotection, they regulate membrane excitability, and they control neurotransmitter release. Because loss of DRG neuronal KATP currents is involved in the pathophysiology of pain after peripheral nerve injury, we characterized the distribution of the KATP channel subunits in rat DRG, and determined their alterations by painful axotomy using RT-PCR, immunohistochemistry and electron microscopy. Results PCR demonstrated Kir6.1, Kir6.2, SUR1 and SUR2 transcripts in control DRG neurons. Protein expression for all but Kir6.1 was confirmed by Western blots and immunohistochemistry. Immunostaining of these subunits was identified by fluorescent and confocal microscopy in plasmalemmal and nuclear membranes, in the cytosol, along the peripheral fibers, and in satellite glial cells. Kir6.2 co-localized with SUR1 subunits. Kir6.2, SUR1, and SUR2 subunits were identified in neuronal subpopulations, categorized by positive or negative NF200 or CGRP staining. KATP current recorded in excised patches was blocked by glybenclamide, but preincubation with antibody against SUR1 abolished this blocking effect of glybenclamide, confirming that the antibody targets the SUR1 protein in the neuronal plasmalemmal membrane. In the myelinated nerve fibers we observed anti-SUR1 immunostaining in regularly spaced funneled-shaped structures. These structures were identified by electron microscopy as Schmidt-Lanterman incisures (SLI formed by the Schwann cells. Immunostaining against SUR1 and Kir6.2 colocalized with anti-Caspr at paranodal sites. DRG excised from rats made hyperalgesic by spinal nerve ligation exhibited similar staining against Kir6.2, SUR1 or SUR2 as DRG from controls, but showed decreased prevalence of SUR1 immunofluorescent NF200 positive neurons. In DRG and dorsal roots proximal to axotomy SLI were smaller and showed decreased SUR1 immunofluorescence. Conclusions We

  5. Aqueous root extract ofLecaniodiscus cupanioides restores the alterations in testicular parameters of sexually impaired male rats

    Institute of Scientific and Technical Information of China (English)

    Quadri O Nurudeen; Taofeek O Ajiboye

    2012-01-01

    Objective:This study aimed to investigate the effects of aqueous root extract ofLecaniodiscus cupanioides (L.cupanioides)on the alterations in the testicular parameters of paroxetine-treated rats.Methods:Group A rats which is the control received distilled water orally for 5 d. Groups B, C, D, E and F consisted of paroxetine-induced sexual dysfunction rats. In addition, Groups C, D, E and F rats were orally treated with 25, 50 and 100 mg/kg body weight of the extract and 7.14 mg/kg body weight of PowMax once daily for 5 d respectively.Results:Paroxetine-induced sexual dysfunction resulted into significant (P<0.05) reduction in the levels of testicular protein, sialic acid, glycogen and cholesterols. These decrease were dose dependently reversed by aqueous root extract ofL. cupanioides. The decrease in the specific activities of acid and alkaline phosphatases, lactate dehydrogenase and gamma-glutamyl transferase in the testes of paroxetine-treated rats were significantly (P<0.05) reversed. Testicular testosterone level decreased significantly (P<0.05) in sexually impaired rats. This decrease was significantly prevented by aqueous root extract ofL. cupanioides. All these alterations brought about by the administration of the extract (25 and 50 mg/kg body weight) compared significantly (P<0.05) with the reference drug, while the 100 mg/kg body weight of the extract compared significantly (P<0.05) with the control.Conclusions:The results of this study showed that aqueous root extract ofL. cupanioidesrestored the alterations in the testicular function parameters of sexually impaired rats. Thus supporting the use of the plants in the management of sexual dysfunction in the folkloric medicine of Nigeria.

  6. Alteration of enod40 expression modifies medicago truncatula root nodule development induced by sinorhizobium meliloti

    Science.gov (United States)

    Charon, C; Sousa, C; Crespi, M; Kondorosi, A

    1999-01-01

    Molecular mechanisms involved in the control of root nodule organogenesis in the plant host are poorly understood. One of the nodulin genes associated with the earliest phases of this developmental program is enod40. We show here that transgenic Medicago truncatula plants overexpressing enod40 exhibit accelerated nodulation induced by Sinorhizobium meliloti. This resulted from increased initiation of primordia, which was accompanied by a proliferation response of the region close to the root tip and enhanced root length. The root cortex of the enod40-transformed plants showed increased sensitivity to nodulation signals. T(1) and T(2) descendants of two transgenic lines with reduced amounts of enod40 transcripts (probably from cosuppression) formed only a few and modified nodulelike structures. Our results suggest that induction of enod40 is a limiting step in primordium formation, and its function is required for appropriate nodule development. PMID:10521525

  7. Root system and its role in forest dieback

    Energy Technology Data Exchange (ETDEWEB)

    Meyer, H.F.

    1985-07-10

    Mycorrhizas have but a short life-time and have to be renewed time and again. They will form only on young roots which are still growing and may be suppressed by certain soil factors like too high a content of mineral nitrogen. The ''new type of forest damage'' is accompanied by a severe decline or loss of the micro-root system. This may be due to various major causes corresponding to different pollutants varying in area and time, with the other causes accompanying in terms of a base load. Disease-triggering load factors may be: a) air pollutants resulting in a reduction of photosynthesis outputs (root damage would then be the result of damage to broad and needle leaves). b) Pollutant input into the soil which directly affects new formation of roots and mycorrhizas (decreasing photosynthesis would then be the result of root damage). Pollutant input into the soil is of great importance in terms of a factor directly acting on the roots. Too high a content of mineral nitrogen (and sulphate) inhibits the formation of new lateral roots and of mycorrhizas thus bringing about a shift in the scion-to-root ratio favouring the scion. The root surface taking up water must be adjusted to the leaf surface giving off water in dependence of the individual site conditions. This necessary harmony between all plant parts is jeopardized by pollutant inputs into the soil and by air-borne pollutants affecting the leaves. Drought or increased subjection to winds in exposed locations will thus result in a premature death in trees affected in their water supply co-efficient.

  8. Plant growth-promoting rhizobacteria and root system functioning

    Directory of Open Access Journals (Sweden)

    Jordan eVacheron

    2013-09-01

    Full Text Available The rhizosphere supports the development and activity of a huge and diversified microbial community, including microorganisms capable to promote plant growth. Among the latter, Plant Growth-Promoting Rhizobacteria (PGPR colonize roots of monocots and dicots, and enhance plant growth by direct and indirect mechanisms. Modification of root system architecture by PGPR implicates the production of phytohormones and other signals that lead, mostly, to enhanced lateral root branching and development of root hairs. PGPR also modify root functioning, improve plant nutrition and influence the physiology of the whole plant. Recent results provided first clues as to how PGPR signals could trigger these plant responses. Whether local and/or systemic, the plant molecular pathways involved remain often unknown. From an ecological point of view, it emerged that PGPR form coherent functional groups, whose rhizosphere ecology is influenced by a myriad of abiotic and biotic factors in natural and agricultural soils, and these factors can in turn modulate PGPR effects on roots. In this paper, we address novel knowledge and gaps on PGPR modes of action and signals, and highlight recent progress on the links between plant morphological and physiological effects induced by PGPR. We also show the importance of taking into account the size, diversity and gene expression patterns of PGPR assemblages in the rhizosphere to better understand their impact on plant growth and functioning. Integrating mechanistic and ecological knowledge on PGPR populations in soil will be a prerequisite to develop novel management strategies for sustainable agriculture.

  9. The Building of Grass-roots Agricultural Technology Extension System

    Institute of Scientific and Technical Information of China (English)

    Wen; YANG; Jian; HUANG

    2013-01-01

    Based on the survey of 154 farmers in Guiyang City, we analyze the basic situation of building of grass-roots agricultural technology extension system in Guiyang City. Then we point out some problems in the building of grass-roots agricultural technology extension system in Guiyang City: the function of grass-roots agricultural technology extension center weakens; the content of agricultural technology extension is difficult to adapt to farmers’ needs for technology; the extension mode of agricultural technology departments does not adapt to the needs of modern agriculture. In order to perfect the building of grass-roots agricultural technology extension system, the countermeasures and recommendations are put forth as follows: strengthening the input of funds, and ensuring that the basic work of public welfare agricultural technology extension is smoothly carried out; innovating upon the system, and improving the function of grass-roots agricultural technology extension center; implementing management on agricultural technology extension personnel’s performance, and promoting the extension efficiency; strengthening the building of extension team in rural areas, and cultivating high-quality agricultural technology extension personnel; exploring the advanced service mode to meet farmers’ needs.

  10. Moth outbreaks alter root-associated fungal communities in subarctic mountain birch forests.

    Science.gov (United States)

    Saravesi, Karita; Aikio, Sami; Wäli, Piippa R; Ruotsalainen, Anna Liisa; Kaukonen, Maarit; Huusko, Karoliina; Suokas, Marko; Brown, Shawn P; Jumpponen, Ari; Tuomi, Juha; Markkola, Annamari

    2015-05-01

    Climate change has important implications on the abundance and range of insect pests in forest ecosystems. We studied responses of root-associated fungal communities to defoliation of mountain birch hosts by a massive geometrid moth outbreak through 454 pyrosequencing of tagged amplicons of the ITS2 rDNA region. We compared fungal diversity and community composition at three levels of moth defoliation (intact control, full defoliation in one season, full defoliation in two or more seasons), replicated in three localities. Defoliation caused dramatic shifts in functional and taxonomic community composition of root-associated fungi. Differentially defoliated mountain birch roots harbored distinct fungal communities, which correlated with increasing soil nutrients and decreasing amount of host trees with green foliar mass. Ectomycorrhizal fungi (EMF) abundance and richness declined by 70-80 % with increasing defoliation intensity, while saprotrophic and endophytic fungi seemed to benefit from defoliation. Moth herbivory also reduced dominance of Basidiomycota in the roots due to loss of basidiomycete EMF and increases in functionally unknown Ascomycota. Our results demonstrate the top-down control of belowground fungal communities by aboveground herbivory and suggest a marked reduction in the carbon flow from plants to soil fungi following defoliation. These results are among the first to provide evidence on cascading effects of natural herbivory on tree root-associated fungi at an ecosystem scale.

  11. DO ELEVATED CO2 AND N FERTILIZATION ALTER FINE ROOT-MYCORRHIZAE RELATIONSHIPS IN PINUS PONDEROSA?

    Science.gov (United States)

    Despite extensive studies on the response of plants to elevated CO2, climate change and N deposition, little is known about the response of roots and mycorrhizae in spite of their key role in plant water and nutrient acquisition. The effects of elevated CO2 and N fertilization on...

  12. PLASMA-MEMBRANE LIPID ALTERATIONS INDUCED BY NACL IN WINTER-WHEAT ROOTS

    NARCIS (Netherlands)

    MANSOUR, MMF; VANHASSELT, PR; KUIPER, PJC

    1994-01-01

    A highly enriched plasma membrane fraction was isolated by two phase partitioning from wheat roots (Triticum aestivum L. cv. Vivant) grown with and without 100 mM NaCl. The lipids of the plasma membrane fraction were extracted and characterized. Phosphatidylcholine and phosphatidylethanolamine were

  13. Elevated pCO(2 )favours nitrate reduction in the roots of wild-type tobacco (Nicotiana tabacum cv. Gat.) and significantly alters N-metabolism in transformants lacking functional nitrate reductase in the roots.

    Science.gov (United States)

    Kruse, Jörg; Hetzger, Ilka; Hänsch, Robert; Mendel, Ralf-R; Walch-Liu, Pia; Engels, Christof; Rennenberg, Heinz

    2002-12-01

    The impact of elevated pCO(2 )on N-metabolism of hydroponically grown wild-type and transformed tobacco plants lacking root nitrate reduction was studied in order to elucidate the effects on (i) nitrate uptake, (ii) long-distance transport of N, (iii) nitrate reduction with emphasis on root-NR, and (iv) the allocation of N between the root and shoot. The findings were related to alterations of growth rates. At elevated pCO(2 )the wild type exhibited higher growth rates, which were accompanied by an increase of NO(3)(-)-uptake per plant, due to a higher root:shoot ratio. Furthermore, elevated pCO(2 )enhanced nitrate reduction in the roots of the wild type, resulting in enhanced xylem-loading of organic N (amino-N) to supply the shoot with sufficient nitrogen, and decreased phloem-transport of organic N in a basipetal direction. Transformed tobacco plants lacking root nitrate reduction were smaller than the wild type and exhibited lower growth rates. Nitrate uptake per plant was decreased in transformed plants as a consequence of an impeded root growth and, thus, a significantly decreased root:shoot ratio. Surprisingly, transformed plants showed an altered allocation of amino-N between the root and the shoot, with an increase of amino-N in the root and a substantial decrease of amino-N in the shoot. In transformed plants, xylem-loading of nitrate was increased and the roots were supplied with organic N via phloem transport. Elevated pCO(2 )increased shoot-NR, but only slightly affected the growth rates of transformed plants, whereas carbohydrates accumulated at elevated pCO(2 )as indicated by a significant increase of the C/N ratio in the leaves of transformed plants. Unexpectedly, the C/N balance and the functional equilibrium between root and shoot growth was disturbed dramatically by the loss of nitrate reduction in the root.

  14. Fracture resistance of roots obturated with novel hydrophilic obturation systems

    Science.gov (United States)

    Hegde, Vibha; Arora, Shashank

    2015-01-01

    Aim: Comparative assessment of fracture resistance of roots obturated with three hydrophilic systems — novel CPoint system, Resilon/Epiphany system, and EndoSequence BC sealer; and one hydrophobic gold standard gutta-percha/AHPlus system. Materials and Methods: Ninety freshly extracted, human, single-rooted mandibular premolars were selected. The specimens were decoronated and standardized to a working length of 13 mm. The teeth were randomly divided into six groups (n = 15). In Group A, teeth were left unprepared and unfilled (negative control). Rest of the groups were prepared by using ProTaper system up to a master apical file F3; followed by which Group B was left unobturated (positive control); Group C, novel CPoint System; group D, Resilon/Epiphany system, Group E EndoSequence BC sealer, and Group F gutta-percha and AH Plus. Specimens were stored for 2 weeks at 100% humidity. Each group was then subjected to fracture testing by using a universal testing machine. The force required to fracture each specimen was recorded and the data was analyzed statistically using analysis of variance (ANOVA) test and Tukey's post-hoc test. Results: The hydrophilic obturation systems have shown to exhibit significantly higher fracture resistance as shown by the values in Groups C, D, and E (P 0.05). Conclusion: In contrast to hydrophobic systems, hydrophilic systems showed higher fracture resistance in a single-rooted premolar. PMID:26069417

  15. Rhizophagus irregularis as an elicitor of rosmarinic acid and antioxidant production by transformed roots of Ocimum basilicum in an in vitro co-culture system.

    Science.gov (United States)

    Srivastava, Shivani; Conlan, Xavier A; Cahill, David M; Adholeya, Alok

    2016-11-01

    Arbuscular mycorrhiza is a symbiotic association formed between plant roots and soil borne fungi that alter and at times improve the production of secondary metabolites. Detailed information is available on mycorrhizal development and its influence on plants grown under various edapho-climatic conditions, however, very little is known about their influence on transformed roots that are rich reserves of secondary metabolites. This raises the question of how mycorrhizal colonization progresses in transformed roots grown in vitro and whether the mycorrhizal fungus presence influences the production of secondary metabolites. To fully understand mycorrhizal ontogenesis and its effect on root morphology, root biomass, total phenolics, rosmarinic acid, caffeic acid and antioxidant production under in vitro conditions, a co-culture was developed between three Agrobacterium rhizogenes-derived, elite-transformed root lines of Ocimum basilicum and Rhizophagus irregularis. We found that mycorrhizal ontogenesis in transformed roots was similar to mycorrhizal roots obtained from an in planta system. Mycorrhizal establishment was also found to be transformed root line-specific. Colonization of transformed roots increased the concentration of rosmarinic acid, caffeic acid and antioxidant production while no effect was observed on root morphological traits and biomass. Enhancement of total phenolics and rosmarinic acid in the three mycorrhizal transformed root lines was found to be transformed root line-specific and age dependent. We reveal the potential of R. irregularis as a biotic elicitor in vitro and propose its incorporation into commercial in vitro secondary metabolite production via transformed roots.

  16. Colonization of Greek olive cultivars' root system by arbuscular mycorrhiza fungus: root morphology, growth, and mineral nutrition of olive plants

    Directory of Open Access Journals (Sweden)

    Theocharis Chatzistathis

    2013-06-01

    Full Text Available Rooted leafy cuttings of three Greek olive (Olea europaea L. cultivars (Koroneiki, Kothreiki and Chondrolia Chalkidikis were grown for six months in three soil types, in an experimental greenhouse, in order to investigate: i if their root system was colonized by arbuscular mycorrhiza fungus (AMF genus and, ii if genotypic differences concerning growth and mineral nutrition of olive plants existed. Gigaspora sp. colonized the root system of the three cultivars studied, while Glomus sp. colonized only the root system of 'Koroneiki'. Furthermore, in most cases root colonization by AMF differed among cultivars and soil types. The maximum root colonization, in all soils, was found in 'Chondrolia Chalkidikis'. In the three soils studied, the ratio shoot dry weight (SDW/ root dry weight (RDW was higher in 'Chondrolia Chalkidikis' than in the other two cultivars. Furthermore, root system morphology of the three olive cultivars was completely different, irrespectively of soil type. Leaf Mn, Fe, Zn, Ca, Mg, K and P concentrations, as well as total per plant nutrient content and nutrient use efficiency, differed among cultivars under the same soil conditions. These differences concerning root morphology, SDW/RDW, as well as nutrient uptake and use efficiency, could be possibly ascribed to the differential AMF colonization by Glomus sp. and Gigaspora sp.

  17. Comparative ultrastructure of the root system in rhizocephalan barnacles (Crustacea

    DEFF Research Database (Denmark)

    Bresciani, J; Høeg, Jens Thorvald

    2001-01-01

    the rootlets towards the external reproductive body. In C. delagei the single, bladder-shaped rootlet lacks both the apical projections in the epidermis, the electron-dense cuticle layer, and the microcuticular projections. We review previous studies on the rhizocephalan root system and discuss functional...

  18. Computer Algebra Systems and Theorems on Real Roots of Polynomials

    Science.gov (United States)

    Aidoo, Anthony Y.; Manthey, Joseph L.; Ward, Kim Y.

    2010-01-01

    A computer algebra system is used to derive a theorem on the existence of roots of a quadratic equation on any bounded real interval. This is extended to a cubic polynomial. We discuss how students could be led to derive and prove these theorems. (Contains 1 figure.)

  19. Cadmium-induced Functional and Ultrastructural Alterations in Roots of Two Transgenic Cotton Cultivars

    Institute of Scientific and Technical Information of China (English)

    DAUD M K; SUN Yu-qiang; ZHU Shui-jin

    2008-01-01

    @@ The toxic effect of cadmium (Cd) at increasing concentrations has been studied with special attention being given to root morphological and ultrastructural changes in two transgenic cotton cultivars viz.BR001 and GK30 and their wild relative cotton genotype viz.Coker 312.In comparison to their respective controls,low concentration (10 and 100 M) of Cd greatly stimulated seed germination,while it was inhibited by highest concentration of Cd (1000 M) in case of two transgenic cultivars.

  20. Alterations of the Thioredoxin System by Hyperoxia

    Science.gov (United States)

    Tipple, Trent E.; Welty, Stephen E.; Nelin, Leif D.; Hansen, Jason M.; Rogers, Lynette K.

    2009-01-01

    Alterations in vascular endothelial growth factor (VEGF) contribute to alveolar simplification seen in animal models of bronchopulmonary dysplasia, and VEGF expression is redox regulated by thioredoxin (Trx)-1 in other diseases. The present studies tested the hypothesis that exposure to 85% O2 negatively impacts the Trx1 system and VEGF expression in the lungs of newborn mice. There was no effect of fraction of inspired oxygen on lung Trx1 or Trx reductase-1 protein levels; however, lung Trx1 protein was predominantly oxidized in the lungs of newborn mice exposed to 85% O2 by 24 hours of exposure. In room air (RA), lung Trx interacting protein (Txnip) levels decreased developmentally through Day 7 (1.0 ± 0.06 [Day 1] vs. 0.49 ± 0.10 [Day 3] vs. 0.29 ± 0.03 [Day 7]; P < 0.01), whereas VEGF expression increased (1.25 ± 0.16 [Day 1] vs. 4.35 ± 1.51 [Day 3] vs. 13.23 ± 0.37 [Day 7]; P < 0.01). Newborn mice exposed to 85% O2 had no developmental decrease in Txnip protein levels and a delayed increase in VEGF protein levels. Lung Txnip and VEGF protein levels were different than in corresponding RA controls at Day 3, before the detection of lung morphologic abnormalities in our model. Txnip and VEGF protein levels were inversely correlated in both the RA and hyperoxia-exposed groups (n = 18; R = −0.66; P = 0.003). In conclusion, oxidation of Trx1 and sustained Txnip expression in the lungs of newborn mice exposed to 85% oxygen is likely to severely attenuate normal Trx1 function. The inverse correlation of Txnip with VEGF expression suggests that decreased Trx1 function contributes to the observed lung developmental abnormalities. PMID:19244202

  1. Study on Constitutive Model for Root System of Korshinsk peashrub in Axial Tension

    Directory of Open Access Journals (Sweden)

    Guo-jian Feng

    2015-12-01

    Full Text Available Constitutive model for root system of Korshinsk peashrub (Caragana korshinskii Kom. in axial tension is an important tool for analyzing the mechanism of soil reinforcement of root system. This model enables a mechanical analysis on strength and deformation of root system and root-soil complex. We carried out axial tension test of root system of Korshinsk peashrub in this paper and discussed the stress-strain relation. Based on the experimental results, the constitutive model for root system of Korshinsk peashrub in axial tension was established. Results showed that: (1 When the strain was smaller than 4%, the stress-strain relation was linear for single root, corresponding to linear elastic deformation; when the strain was larger than 4%, the single root underwent plastic deformation; (2 Elastic modulus of the root system was related to root diameter by a power function. The smaller the root diameter, the higher the elastic modulus was; (3 Root diameter was related to the ultimate tensile strength of root also by a power function. The smaller the root diameter, the higher the ultimate tensile strength of root was; (4 The tensile stress-strain curve of the root system divided into ascending segment and descending segment, which was fitted by parabola and curvilinear model, respectively.

  2. Ecology of the microbiome of the infected root canal system: A comparison between apical and coronal root segments

    NARCIS (Netherlands)

    Özok, A.R.; Persoon, I.F.; Huse, S.M.; Keijser, B.J.F.; Wesselink, P.R.; Crielaard, W.; Zaura, E.

    2012-01-01

    Aim To evaluate the microbial ecology of the coronal and apical segments of infected root canal systems using a complete sampling technique and next-generation sequencing. Methodology The roots of 23 extracted teeth with apical periodontitis were sectioned in half, horizontally, and cryo-pulverized.

  3. Integration of root phenes revealed by intensive phenotyping of root system architecture, anatomy, and physiology in cereals

    Science.gov (United States)

    York, Larry

    2015-04-01

    Food insecurity is among the greatest challenges humanity will face in the 21st century. Agricultural production in much of the world is constrained by the natural infertility of soil which restrains crops from reaching their yield potential. In developed nations, fertilizer inputs pollute air and water and contribute to climate change and environmental degradation. In poor nations low soil fertility is a primary constraint to food security and economic development. Water is almost always limiting crop growth in any system. Increasing the acquisition efficiency of soil resources is one method by which crop yields could be increased without the use of more fertilizers or irrigation. Cereals are the most widely grown crops, both in terms of land area and in yield, so optimizing uptake efficiency of cereals is an important goal. Roots are the primary interface between plant and soil and are responsible for the uptake of soil resources. The deployment of roots in space and time comprises root system architecture (RSA). Cereal RSA is a complex phenotype that aggregates many elemental phenes (elemental units of phenotype). Integration of root phenes will be determined by interactions through their effects on soil foraging and plant metabolism. Many architectural, metabolic, and physiological root phenes have been identified in maize, including: nodal root number, nodal root growth angle, lateral root density, lateral root length, aerenchyma, cortical cell size and number, and nitrate uptake kinetics. The utility of these phenes needs confirmation in maize and in other cereals. The maize root system is composed of an embryonic root system and nodal roots that emerge in successive whorls as the plant develops, and is similar to other cereals. Current phenotyping platforms often ignore the inner whorls and instead focus on the most visible outer whorls after excavating a maize root crown from soil. Here, an intensive phenotyping platform evaluating phenes of all nodal root

  4. Composite potato plants with transgenic roots on non-transgenic shoots: a model system for studying gene silencing in roots

    DEFF Research Database (Denmark)

    Horn, Patricia; Santala, Johanna; Nielsen, Steen Lykke;

    2014-01-01

    Composite plants, with transgenic roots on a non-transgenic shoot, can be obtained by shoot explant transformation with Agrobacterium rhizogenes. The aim of this study was to generate composite potato plants (Solanum tuberosum) to be used as a model system in future studies on root...... of composite potato plants expressed significantly higher amounts of β-glucuronidase (GUS) than the roots of a GUS-transgenic potato line event. Silencing of the uidA transgene (GUS) was tested by inducing roots on the GUS-transgenic cv. Albatros event with strains of A. rhizogenes over-expressing either......-mediated silencing (co-suppression) was not functional in roots. The results suggest that composite plants offer a useful experimental system for potato research, which has gained little previous attention....

  5. Comparison of Three Methods for Determination of Root Hydraulic Conductivity of Maize (Zea mays L.) Root System

    Institute of Scientific and Technical Information of China (English)

    LI Qing-ming; LIU Bin-bin

    2010-01-01

    Three techniques of root pressure probe,pressure chamber and high pressure flow meter were used to measure the hydraulic conduetivities (Lp,) of whole root systems of young maize (Zea mays L.) seedlings grown hydroponically under either drought or normal water conditions.Compared to normal water conditions,drought stress simulated by polyethylene glycol 6 000 (osmotic potential=-0.2 MPa) reduced Lp,in the root system by over 50%.It indicated that water permeability in the roots decreased significantly when plants suffered from water shortages.Moreover,there was no significant difference (P<0.05) on the Lpr values in the root systems developed under a given water stress regime among the three techniques used.Therefore,all three methods are acceptable to study the hydraulic conductivity of maize seedling root systems.We have also highlighted some of the technical limitations of each method.It can be inferred that the root pressure probe is preferable for young maize seedlings because it is subtle and has the additional ability to determine solute transport properties,but the method is time consuming.Other advantages and disadvantages of each technique are discussed in order to acquaint researchers with basic information that could contribute to their choice of an appropriate technique for future studies.

  6. Root Zone Respiration on Hydroponically Grown Wheat Plant Systems

    Science.gov (United States)

    Soler-Crespo, R. A.; Monje, O. A.

    2010-01-01

    Root respiration is a biological phenomenon that controls plant growth and physiological development during a plant's lifespan. This process is dependent on the availability of oxygen in the system where the plant is located. In hydroponic systems, where plants are submerged in a solution containing vital nutrients but no type of soil, the availability of oxygen arises from the dissolved oxygen concentration in the solution. This oxygen concentration is dependent on the , gas-liquid interface formed on the upper surface of the liquid, as given by Henry's Law, depending on pressure and temperature conditions. Respiration rates of the plants rise as biomass and root zone increase with age. The respiration rate of Apogee wheat plants (Triticum aestivum) was measured as a function of light intensity (catalytic for photosynthesis) and CO2 concentration to determine their effect on respiration rates. To determine their effects on respiration rate and plant growth microbial communities were introduced into the system, by Innoculum. Surfactants were introduced, simulating gray-water usage in space, as another factor to determine their effect on chemical oxygen demand of microbials and on respiration rates of the plants. It is expected to see small effects from changes in CO2 concentration or light levels, and to see root respiration decrease in an exponential manner with plant age and microbial activity.

  7. Solving polynomial systems using no-root elimination blending schemes

    KAUST Repository

    Barton, Michael

    2011-12-01

    Searching for the roots of (piecewise) polynomial systems of equations is a crucial problem in computer-aided design (CAD), and an efficient solution is in strong demand. Subdivision solvers are frequently used to achieve this goal; however, the subdivision process is expensive, and a vast number of subdivisions is to be expected, especially for higher-dimensional systems. Two blending schemes that efficiently reveal domains that cannot contribute by any root, and therefore significantly reduce the number of subdivisions, are proposed. Using a simple linear blend of functions of the given polynomial system, a function is sought after to be no-root contributing, with all control points of its BernsteinBézier representation of the same sign. If such a function exists, the domain is purged away from the subdivision process. The applicability is demonstrated on several CAD benchmark problems, namely surfacesurfacesurface intersection (SSSI) and surfacecurve intersection (SCI) problems, computation of the Hausdorff distance of two planar curves, or some kinematic-inspired tasks. © 2011 Elsevier Ltd. All rights reserved.

  8. Square root voting system, optimal threshold and \\pi

    CERN Document Server

    Zyczkowski, Karol

    2011-01-01

    The problem of designing an optimal weighted voting system for the two-tier voting, applicable in the case of the Council of Ministers of the European Union (EU), is investigated. Various arguments in favour of the square root voting system, where the voting weights of member states are proportional to the square root of their population are discussed and a link between this solution and the random walk in the one-dimensional lattice is established. It is known that the voting power of every member state is approximately equal to its voting weight, if the threshold q for the qualified majority in the voting body is optimally chosen. We analyze the square root voting system for a generic 'union' of M states and derive in this case an explicit approximate formula for the level of the optimal threshold: $q \\simeq 1/2+1/\\sqrt{{\\pi} M}$. The prefactor $1/\\sqrt{{\\pi}}$ appears here as a result of averaging over the ensemble of unions with random populations.

  9. Segregation and Alteration of Phenolic and Aliphatic Components of Root and Leaf Litter by Detritivores and Microbes

    Science.gov (United States)

    Filley, T. R.; Altmann, J.; Szlavecz, K. A.; Kalbitz, K.; Gamblin, D.; Nierop, K.

    2012-12-01

    The physical and microbial transformation of plant detritus in the litter layer and soil is accompanied by chemical separation of progressively soluble fractions and their movement into the rhizosphere driving subsequent soil processes. We investigated the combined action of specific detritivores, microbial decay, and leaching on the chemical separation of plant aromatic and aliphatic components from root, wood, and leaf tissue using 13C-TMAH thermochemolysis. This method enabled the simultaneous analysis of hydrolyzable tannin and lignin fragments, substituted fatty acids, and condensed tannin composition and revealed process-specific chemical transformations to plant secondary compounds. Long-term incubation and field sampling demonstrated how plant residues are progressively leached of the water soluble, oxidized fragments generated through decay. The residues appeared only slightly altered, in the case of brown rot wood, or enriched in aliphatic fragments, in the case of leaf and root tissue. Water extractable fractions were always selectively dominated by polyphenolics, either as demethylated lignin or tannins, and nearly devoid of aliphatic materials, despite high concentrations in the starting materials. Additionally, for plant materials with high tannin contents, such as pine needles, consumption and passage through some arthropod guts revealed what appeared to be microbially-mediated methylation of phenols, and a loss of tannins in leachates. These findings are indications for an in-situ phenol detoxification mechanism. This research provides important information regarding the links between biochemical decay and the chemical nature of organic matter removed and remaining in the soil profile.

  10. Altered neuronatin expression in the rat dorsal root ganglion after sciatic nerve transection

    Directory of Open Access Journals (Sweden)

    Wu Chih-Hsien

    2010-05-01

    Full Text Available Abstract Background Several molecular changes occur following axotomy, such as gene up-regulation and down-regulation. In our previous study using Affymetrix arrays, it was found that after the axotomy of sciatic nerve, there were many novel genes with significant expression changes. Among them, neuronatin (Nnat was the one which expression was significantly up-regulated. Nnat was identified as a gene selectively expressed in neonatal brains and markedly reduced in adult brains. The present study investigated whether the expression of Nnat correlates with symptoms of neuropathic pain in adult rats with transected sciatic nerve. Methods Western blotting, immunohistochemistry, and the Randall and Selitto test were used to study the protein content, and subcellular localization of Nnat in correlation with pain-related animal behavior. Results It was found that after nerve injury, the expression of Nnat was increased in total protein extracts. Unmyelinated C-fiber and thinly myelinated A-δ fiber in adult dorsal root ganglions (DRGs were the principal sub-population of primary afferent neurons with distributed Nnat. The increased expression of Nnat and its subcellular localization were related to mechanical hyperalgesia. Conclusions The results indicated that there was significant correlation between mechanical hyperalgesia in axotomy of sciatic nerve and the increased expression of Nnat in C-fiber and A-δ fiber of adult DRG neurons.

  11. The transparent testa4 mutation prevents flavonoid synthesis and alters auxin transport and the response of Arabidopsis roots to gravity and light.

    Science.gov (United States)

    Buer, Charles S; Muday, Gloria K

    2004-05-01

    We examined whether flavonoids act as endogenous auxin transport regulators during gravity vector and light intensity changes in Arabidopsis thaliana roots. Flavonoid deficient transparent testa4 [tt4(2YY6)] seedlings had elevated root basipetal auxin transport compared with the wild type, consistent with the absence of a negative auxin transport regulator. The tt4(2YY6) roots had delayed gravitropism that was chemically complemented with a flavonoid intermediate. Flavonoid accumulation was found in wild-type columella cells, the site of gravity perception, and in epidermal and cortical cells, the site of differential growth, but flavonoid accumulation was absent in tt4(2YY6) roots. Flavonoid accumulation was higher in gravity-stimulated root tips as compared with vertical controls, with maximum differences coinciding with the timing of gravitropic bending, and was located in epidermal cells. Exogenous indole-3-acetic acid (IAA) also elevated flavonoid accumulation, suggesting that flavonoid changes in response to gravity might be partly as a result of changing IAA distribution. Acropetal IAA transport was also elevated in roots of tt4(2YY6). Flavonoid synthesis was repressed in the dark, as were differences in root acropetal transport in tt4(2YY6). These results are consistent with light- and gravity-induced flavonoid stimulation that alters auxin transport in roots and dependent physiological processes, including gravitropic bending and root development.

  12. Statistical modeling of nitrogen-dependent modulation of root system architecture in Arabidopsis thaliana

    Institute of Scientific and Technical Information of China (English)

    Takao Araya; Takuya Kubo; Nicolaus von Wiren; Hideki Takahashi

    2016-01-01

    Plant root development is strongly affected by nutrient availability. Despite the importance of structure and function of roots in nutrient acquisition, statistical modeling approaches to evaluate dynamic and temporal modulations of root system architecture in response to nutrient availability have remained as widely open and exploratory areas in root biology. In this study, we developed a statistical modeling approach to investigate modulations of root system archi-tecture in response to nitrogen availability. Mathematical models were designed for quantitative assessment of root growth and root branching phenotypes and their dynamic relationships based on hierarchical configuration of primary and lateral roots formulating the fishbone-shaped root system architecture in Arabidopsis thaliana. Time-series datasets reporting dynamic changes in root developmental traits on different nitrate or ammonium concentrations were gener-ated for statistical analyses. Regression analyses unraveled key parameters associated with:(i) inhibition of primary root growth under nitrogen limitation or on ammonium;(i ) rapid progression of lateral root emergence in response to ammonium; and (i i) inhibition of lateral root elongation in the presence of excess nitrate or ammonium. This study provides a statistical framework for interpreting dynamic modulation of root system architecture, supported by meta-analysis of datasets displaying morphological responses of roots to diverse nitrogen supplies.

  13. Tree Root System Characterization and Volume Estimation by Terrestrial Laser Scanning and Quantitative Structure Modeling

    Directory of Open Access Journals (Sweden)

    Aaron Smith

    2014-12-01

    Full Text Available The accurate characterization of three-dimensional (3D root architecture, volume, and biomass is important for a wide variety of applications in forest ecology and to better understand tree and soil stability. Technological advancements have led to increasingly more digitized and automated procedures, which have been used to more accurately and quickly describe the 3D structure of root systems. Terrestrial laser scanners (TLS have successfully been used to describe aboveground structures of individual trees and stand structure, but have only recently been applied to the 3D characterization of whole root systems. In this study, 13 recently harvested Norway spruce root systems were mechanically pulled from the soil, cleaned, and their volumes were measured by displacement. The root systems were suspended, scanned with TLS from three different angles, and the root surfaces from the co-registered point clouds were modeled with the 3D Quantitative Structure Model to determine root architecture and volume. The modeling procedure facilitated the rapid derivation of root volume, diameters, break point diameters, linear root length, cumulative percentages, and root fraction counts. The modeled root systems underestimated root system volume by 4.4%. The modeling procedure is widely applicable and easily adapted to derive other important topological and volumetric root variables.

  14. Adaptive growth of tree root systems in response to wind action and site conditions.

    Science.gov (United States)

    Nicoll, Bruce C.; Ray, Duncan

    1996-01-01

    Soil-root plate dimensions and structural root architecture were examined on 46-year-old Sitka spruce (Picea sitchensis (Bong.) Carr.) trees that had been mechanically uprooted. Rooting depth was restricted by a water table, and root system morphology had adapted to resist the wind movement associated with shallow rooting. The spread of the root system and the ratio of root mass to shoot mass (root/shoot ratio) were both negatively related to soil-root plate depth. Root systems had more structural root mass on the leeward side than the windward side of the tree relative to the prevailing wind direction. Cross sections of structural roots were obtained at distances of 0.5, 0.75, 1.0, and 1.25 m from the tree center. Buttressed parts of roots had greater lateral and vertical secondary thickening above rather than below the biological center. This uneven growth, which produced a shape similar in cross section to a T-beam, was greater on the leeward side of the tree, and was greatest at 0.5 m from the tree center of shallow rooted trees. Further from the tree, particularly on the windward side, many roots developed eccentric cross-sectional shapes comparable to I-beams, which would efficiently resist vertical flexing. Roots became more ovoid in shape with increasing distance from the tree, especially on deep rooted trees where lateral roots tapered rapidly to a small diameter. We conclude that these forms of adaptive growth in response to wind movement improve the rigidity of the soil-root plate and counteract the increasing vulnerability to windthrow as the tree grows.

  15. Altered anterior visual system development following early monocular enucleation

    Directory of Open Access Journals (Sweden)

    Krista R. Kelly

    2014-01-01

    Conclusions: The novel finding of an asymmetry in morphology of the anterior visual system following long-term survival from early monocular enucleation indicates altered postnatal visual development. Possible mechanisms behind this altered development include recruitment of deafferented cells by crossing nasal fibres and/or geniculate cell retention via feedback from primary visual cortex. These data highlight the importance of balanced binocular input during postnatal maturation for typical anterior visual system morphology.

  16. [Three-dimensional morphological modeling and visualization of wheat root system].

    Science.gov (United States)

    Tan, Feng; Tang, Liang; Hu, Jun-Cheng; Jiang, Hai-Yan; Cao, Wei-Xing; Zhu, Yan

    2011-01-01

    Crop three-dimensional (3D) morphological modeling and visualization is an important part of digital plant study. This paper aimed to develop a 3D morphological model of wheat root system based on the parameters of wheat root morphological features, and to realize the visualization of wheat root growth. According to the framework of visualization technology for wheat root growth, a 3D visualization model of wheat root axis, including root axis growth model, branch geometric model, and root axis curve model, was developed firstly. Then, by integrating root topology, the corresponding pixel was determined, and the whole wheat root system was three-dimensionally re-constructed by using the morphological feature parameters in the root morphological model. Finally, based on the platform of OpenGL, and by integrating the technologies of texture mapping, lighting rendering, and collision detection, the 3D visualization of wheat root growth was realized. The 3D output of wheat root system from the model was vivid, which could realize the 3D root system visualization of different wheat cultivars under different water regimes and nitrogen application rates. This study could lay a technical foundation for further development of an integral visualization system of wheat plant.

  17. Free Fermionic Heterotic Model Building and Root Systems

    CERN Document Server

    Robinson, M; Hunziker, M

    2008-01-01

    We consider an alternative derivation of the GSO Projection in the free fermionic construction of the weakly coupled heterotic string in terms of root systems, as well as the interpretation of the GSO Projection in this picture. We then present an algorithm to systematically and efficiently generate input sets (i.e. basis vectors) in order to study Landscape statistics with minimal computational cost. For example, the improvement at order 6 is approximately 10^{-13} over a traditional brute force approach, and improvement increases with order. We then consider an example of statistics on a relatively simple class of models.

  18. Alteration of P2X3 expression in dorsal root ganglia after sciatic nerve ligation

    Institute of Scientific and Technical Information of China (English)

    Guoxing Zhou; Lesi Xie; Qiben Wang; Qingping Yu; Xiaofu Liu; Qiumei Liu; Wei Peng; Zhicheng Zeng

    2007-01-01

    BACKGROUND: The expressions of P2X3 receptor in dorsal root ganglia (DRG) after different peripheral nerve injuries are diverse. It indicates the different roles of P2X3 in different models-caused neuropathologic pains.OBJECTIVE: To observe the expressions of P2X3 in corresponding DRG after sciatic nerve ligation in rats.DESIGN: Controlled observation experiment.SETTING: Department of Morphology, Hunan Traditional Chinese Medical College; Department of Human Anatomy and Neurobiology, Xiangya Medical College, Central South University.MATERIALS: Thirty-five healthy adult SD rats of clean grade an d either gender, weighing (200±20) g,were involved. According to the random digits table, the involved rats were randomized into 3 groups:normal group (n =5), sham-operated group (n =5) and experimental group (n =25). The experimental group were subdivided into 3, 7, 14, 21, 28 days groups according to different surviving time after operation, 5 rats at each time point. Polyclonal rabbit anti-P2X3 antibody (ABCAM company); biotinylated goat anti-rabbit IgG (Zhongshanjingqiao Biotechnical Co., Ltd., Beijing); Motic fluorescence microscope (Motic, Germany).METHODS: The experiments were carried out in the Department of Human Anatomy and Neurobiology,Xiangya Medical College, Central South University from June to December 2006. ① Rats of experimental group were created into models by ligation of right sciatic nerve according to the method of Seltzer et al. Left sciatic nerve was used as self-control. As for rats in the sham-operated group, ligation of sciatic nerve was omitted, but other procedures were the same as those in the experimental group. Rats of normal group were untouched. ② Rats of the normal group and sham-operated group survived for 14 days separately, and those of experimental group survived for corresponding time. After being deeply anesthetized by intraperitoneal injection of over-dose sodium pentobarbital, the rats of experimental group were transcardially

  19. Novel scanning procedure enabling the vectorization of entire rhizotron-grown root systems

    Directory of Open Access Journals (Sweden)

    Lobet Guillaume

    2013-01-01

    Full Text Available Abstract This paper presents an original spit-and-combine imaging procedure that enables the complete vectorization of complex root systems grown in rhizotrons. The general principle of the method is to (1 separate the root system into a small number of large pieces to reduce root overlap, (2 scan these pieces one by one, (3 analyze separate images with a root tracing software and (4 combine all tracings into a single vectorized root system. This method generates a rich dataset containing morphological, topological and geometrical information of entire root systems grown in rhizotrons. The utility of the method is illustrated with a detailed architectural analysis of a 20-day old maize root system, coupled with a spatial analysis of water uptake patterns.

  20. Altered acetylcholinesterase levels in the spinal cord anterior horn and dorsal root ganglion following sciatic nerve ischemia

    Institute of Scientific and Technical Information of China (English)

    Zhenjun Yang; Pei Wang; Songhe Yang; Jingfeng Xue

    2009-01-01

    BACKGROUND: Peripheral nerve ischemia has been shown to result in ischemic fiber degeneration and axoplasmic transport disturbance. However, the effect on acetylcholinesterase (AChE) expression in relevant cells following sciatic nerve ischemia remains unclear. OBJECTIVE: To observe AChE concentration changes following peripheral nerve ischemia. DESIGN, TIME AND SETTING: The present comparative observation, neuroanatomical experiment was performed at the Central Laboratory Animal of Chengde Medical College between 2006 and 2007. MATERIALS: A total of 20 healthy, adult, Wistar rats were randomized into two groups (n = 10): 8-day ischemia and 14-day ischemia. METHODS: Ischemia injury was induced in the unilateral sciatic nerve (experimental side) through ligation of the common iliac artery. The contralateral side received no intervention, and served as the control side. Rats in the 8-day ischemia and 14-day ischemia groups were allowed to survive for 8 and 14 days, respectively. MAIN OUTCOME MEASURES: The L5 lumbar spinal cord and the L5 dorsal root ganglion were removed from both sides and sectioned utilizing a Leica vibrating slicer. AChE cellular expression was detected using Karnovsky-Root, and the number of AChE-positive cells and average gray value were analyzed using a MiVnt image analysis system. RESULTS: In the 8-day ischemia group, AChE-positive cell numbers were significantly less in the dorsal root ganglion and spinal cord anterior horn of the experimental side, but the average gray value was significantly greater, compared with the control side (P < 0.05). These changes were more significant in the 14-day ischemia group than in the 8-day ischemia group (P < 0.01). CONCLUSION: Peripheral nerve ischemia leads to decreased AChE expression in the associated cells in a time-dependent manner.

  1. Influence of arbuscular mycorrhizae on the root system of maize plants under salt stress.

    Science.gov (United States)

    Sheng, Min; Tang, Ming; Chen, Hui; Yang, Baowei; Zhang, Fengfeng; Huang, Yanhui

    2009-07-01

    Salt stress has become a severe global problem, and salinity is one of the most important abiotic factors limiting plant growth and yield. It is known that arbuscular mycorrhizal (AM) fungi decrease plant yield losses under salinity. With the aim of determining whether AM inoculation would give an advantage to root development under salt stress, a greenhouse experiment was carried out with AM or without AM fungi. Maize plants were grown in a sand and soil mixture with 5 NaCl levels (0, 0.5, 1.0, 1.5, and 2.0 g/kg dry substrate) for 55 days, following 15 days of nonsaline pretreatment. At all salt levels, mycorrhizal plants had higher dry shoot and root mass, higher root activity, and lower root to shoot ratios than non-mycorrhizal plants. In salt-free soil, root length, root surface area, root volume, and number of root tips and forks were significantly larger in mycorrhizal plants than in non-mycorrhizal plants, whereas, under salt stress, average root diameter and root volume of mycorrhizal plants were larger than those of non-mycorrhizal plants. Regardless of the NaCl level, mycorrhizal plants had lower specific root length, lower percentage of root length in the 0-0.2 mm diameter class, and higher percentage of root length in both the 0.2-0.4 mm and 0.4-0.6 mm diameter classes, which suggests that the root system shows a significant shift towards a thicker root system when maize plants were inoculated with Glomus mosseae (Nicolson & Gerdemann). The results presented here indicate that the improvements in root activity and the coarse root system of mycorrhizal maize may help in alleviating salt stress on the plant.

  2. Estimation of runoff mitigation by morphologically different cover crop root systems

    Science.gov (United States)

    Yu, Yang; Loiskandl, Willibald; Kaul, Hans-Peter; Himmelbauer, Margarita; Wei, Wei; Chen, Liding; Bodner, Gernot

    2016-07-01

    Hydrology is a major driver of biogeochemical processes underlying the distinct productivity of different biomes, including agricultural plantations. Understanding factors governing water fluxes in soil is therefore a key target for hydrological management. Our aim was to investigate changes in soil hydraulic conductivity driven by morphologically different root systems of cover crops and their impact on surface runoff. Root systems of twelve cover crop species were characterized and the corresponding hydraulic conductivity was measured by tension infiltrometry. Relations of root traits to Gardner's hydraulic conductivity function were determined and the impact on surface runoff was estimated using HYDRUS 2D. The species differed in both rooting density and root axes thickness, with legumes distinguished by coarser axes. Soil hydraulic conductivity was changed particularly in the plant row where roots are concentrated. Specific root length and median root radius were the best predictors for hydraulic conductivity changes. For an intensive rainfall simulation scenario up to 17% less rainfall was lost by surface runoff in case of the coarsely rooted legumes Melilotus officinalis and Lathyrus sativus, and the densely rooted Linum usitatissimum. Cover crops with coarse root axes and high rooting density enhance soil hydraulic conductivity and effectively reduce surface runoff. An appropriate functional root description can contribute to targeted cover crop selection for efficient runoff mitigation.

  3. Earthworm effects on native grassland root system dynamics under natural and increased rainfall

    Directory of Open Access Journals (Sweden)

    John A. Arnone

    2014-04-01

    Full Text Available Earthworms (EWs can modify soil structure and nutrient availability, and hence alter conditions for plant growth through their burrowing and casting activities. However, few studies have specifically quantified EW effects by experimentally manipulating EW densities (EWDs. In an earlier field study in native grassland ecosystems exposed to ambient and experimentally elevated rainfall (+280 mm year-1, projected under some climate change scenarios, we found no effects of EWDs (37, 114, 169 EW m-2 and corresponding EW activity on aboveground net primary productivity (ANPP, even though soil nutrient availability likely increased with increasing EWDs. The lack of effects of EWDs on ANPP suggested that EWs may have adversely affected root systems in that study in some way. The objective of the present study was to quantify responses of root length density (RLD, using data collected from the same grassland plots during the earlier study. RLDs were highest in plots with low EWDs and decreased in plots with higher EWDs. Elevated rainfall primarily increased RLDs in the low EWD treatment (by almost +40%. Reductions in RLDs resulting from increased EWDs did not affect ANPP. Our results indicate that elevating EWDs above ambient levels may limit root growth through large increases in soil bioturbation, but concurrent increases in cast production and nutrient availability may compensate for the suppression of root nutrient absorbing surface area leaving ANPP unchanged, but with shifts in growth (biomass allocation toward shoots. Similarly, reductions in EWDs appeared to promote higher RLDs that increased soil nutrient foraging in soil with lower amounts of nutrients because of reduced casting activity. Amplified responses observed when rainfall during the growing season was increased suggest that EWDs may mainly affect RLDs and above- vs. belowground growth (biomass allocation under climate changes that include more frequent wetter-than-average growing

  4. Study on the Root Systems for Different Types of Winter Wheat

    Institute of Scientific and Technical Information of China (English)

    YAN Su-hong; YANG Zhao-sheng; WAN Jun-juan; LI Tie-zhuang; WANG Hai-feng

    2002-01-01

    Root growth traits for different wheat types varied during the growth cycle. The root system of 93 Zhong 6, which is a dwarf, big-ear variety, reached its highest density at anthesis, while the root density of Zhoumai 13, a medium-type variety, demonsrated its highest value during the node elongation stage and decreased rapidly at later growth stages, which resulted in lower yield. The root density of Zhongyu 6 and 98Zhong 18, high yield potential, multiple ears varieties, did not show observable variation in their root systems during their growth cycles.

  5. Physiological superiority of root system of inter-subspecific hybrid rice

    Institute of Scientific and Technical Information of China (English)

    2000-01-01

    @@Physiology of root system, especially root system activity,is a very important physiological trait of rice, which directly affects rice growth and development of the aerial parts and yield. Inter-subspecific hybrid rice IIyou 2070and Ilyou 419, as well as their restorer lines 2070 and Zhong419, were used to study physiological traits of rice root system. Three years research indicated that in ter-subspecific hybrid rice had root systems of physiological superiority. Results were briefly showed as the follows:

  6. Mephedrone alters basal ganglia and limbic dynorphin systems.

    Science.gov (United States)

    German, Christopher L; Alburges, Mario E; Hoonakker, Amanda J; Fleckenstein, Annette E; Hanson, Glen R

    2014-08-25

    Mephedrone (4-methymethcathinone) is a synthetic cathinone designer drug that disrupts central nervous system (CNS) dopamine (DA) signaling. Numerous central neuropeptide systems reciprocally interact with dopaminergic neurons to provide regulatory counterbalance, and are altered by aberrant DA activity associated with stimulant exposure. Endogenous opioid neuropeptides are highly concentrated within dopaminergic CNS regions and facilitate many rewarding and aversive properties associated with drug use. Dynorphin, an opioid neuropeptide and kappa receptor agonist, causes dysphoria and aversion to drug consumption through signaling within the basal ganglia and limbic systems, which is affected by stimulants. This study evaluated how mephedrone alters basal ganglia and limbic system dynorphin content, and the role of DA signaling in these changes. Repeated mephedrone administrations (4 × 25 mg/kg/injection, 2-h intervals) selectively increased dynorphin content throughout the dorsal striatum and globus pallidus, decreased dynorphin content within the frontal cortex, and did not alter dynorphin content within most limbic system structures. Pretreatment with D1 -like (SCH-23380) or D2 -like (eticlopride) antagonists blocked mephedrone-induced changes in dynorphin content in most regions examined, indicating altered dynorphin activity is a consequence of excessive DA signaling. Synapse, 2014. © 2014 Wiley Periodicals, Inc.

  7. Systemic allergic dermatitis caused by Apiaceae root vegetables

    DEFF Research Database (Denmark)

    Paulsen, Evy; Petersen, Thomas H; Fretté, Xavier C;

    2014-01-01

    Immediate hypersensitivity reactions to root vegetables of the Umbelliferae plant family (Apiaceae) is well known. Delayed-type hypersensitivity is rarely reported.......Immediate hypersensitivity reactions to root vegetables of the Umbelliferae plant family (Apiaceae) is well known. Delayed-type hypersensitivity is rarely reported....

  8. Phenotyping for the dynamics of field wheat root system architecture

    Science.gov (United States)

    Chen, Xinxin; Ding, Qishuo; Błaszkiewicz, Zbigniew; Sun, Jiuai; Sun, Qian; He, Ruiyin; Li, Yinian

    2017-01-01

    We investigated a method to quantify field-state wheat RSA in a phenotyping way, depicting the 3D topology of wheat RSA in 14d periods. The phenotyping procedure, proposed for understanding the spatio-temporal variations of root-soil interaction and the RSA dynamics in the field, is realized with a set of indices of mm scale precision, illustrating the gradients of both wheat root angle and elongation rate along soil depth, as well as the foraging potential along the side directions. The 70d was identified as the shifting point distinguishing the linear root length elongation from power-law development. Root vertical angle in the 40 mm surface soil layer was the largest, but steadily decreased along the soil depth. After 98d, larger root vertical angle appeared in the deep soil layers. PAC revealed a stable root foraging potential in the 0–70d period, which increased rapidly afterwards (70–112d). Root foraging potential, explained by MaxW/MaxD ratio, revealed an enhanced gravitropism in 14d period. No-till post-paddy wheat RLD decreased exponentially in both depth and circular directions, with 90% roots concentrated within the top 20 cm soil layer. RER along soil depth was either positive or negative, depending on specific soil layers and the sampling time.

  9. Evolving technologies for growing, imaging and analyzing 3D root system architecture of crop plants

    Institute of Scientific and Technical Information of China (English)

    Miguel A Pineros; Pierre-Luc Pradier; Nathanael M Shaw; Ithipong Assaranurak; Susan R McCouch; Craig Sturrock; Malcolm Bennett; Leon V Kochian; Brandon G Larson; Jon E Shaff; David J Schneider; Alexandre Xavier Falcao; Lixing Yuan; Randy T Clark; Eric J Craft; Tyler W Davis

    2016-01-01

    A plant’s ability to maintain or improve its yield under limiting conditions, such as nutrient deficiency or drought, can be strongly influenced by root system architec-ture (RSA), the three-dimensional distribution of the different root types in the soil. The ability to image, track and quantify these root system attributes in a dynamic fashion is a useful tool in assessing desirable genetic and physiological root traits. Recent advances in imaging technology and phenotyp-ing software have resulted in substantive progress in describing and quantifying RSA. We have designed a hydroponic growth system which retains the three-dimen-sional RSA of the plant root system, while allowing for aeration, solution replenishment and the imposition of nutrient treatments, as well as high-quality imaging of the root system. The simplicity and flexibility of the system allows for modifications tailored to the RSA of different crop species and improved throughput. This paper details the recent improvements and innovations in our root growth and imaging system which allows for greater image sensitivity (detection of fine roots and other root details), higher efficiency, and a broad array of growing conditions for plants that more closely mimic those found under field conditions.

  10. Optical methods for creating delivery systems of chemical compounds to plant roots

    Science.gov (United States)

    Kuznetsov, Pavel E.; Rogacheva, Svetlana M.; Arefeva, Oksana A.; Minin, Dmitryi V.; Tolmachev, Sergey A.; Kupadze, Machammad S.

    2004-08-01

    Spectrophotometric and fluorescence methods have been used for creation and investigation of various systems of target delivery of chemical compounds to roots of plants. The possibility of using liposomes, incrusted by polysaccharides of the external surface of nitrogen-fixing rizospheric bacteria Azospirillum brasilense SP 245, and nanoparticles incrusted by polysaccharides of wheat roots, as the named systems has been shown. The important role of polysaccharide-polysaccharide interaction in the adsorption processes of bacteria on wheat roots has been demonstrated.

  11. Ecological adaptation of Reaumuria soongorica root system architecture to arid environments

    Institute of Scientific and Technical Information of China (English)

    LiShan Shan; Yi Li; DongMei Geng; QiuLian Dong

    2014-01-01

    The architectural parameters of Reaumuria soongorica root system in different habitats of Gansu Province, China were analyzed to examine its ecological adaptability to arid environments. Results show that:(1) Topological indices of R. Soongorica root sys-tem are small in all habitats, and root branching pattern tends to be dichotomous. Also, the indices gradually increase in the Min-qin windblown sand region and the Zhangye Gobi region in Hexi Corridor, which indicates that drought tends to produce her-ringbone-like root branching patterns. (2) Fractal dimension values of R. Soongorica root system are small and not obvious in the Minqin windblown sand region and the Zhangye Gobi region in Hexi Corridor, with values of 1.1778 and 1.1169, respectively. Fractal dimension values are relatively large in Jiuzhoutai semi-arid hilly and gully region of the Loess Plateau, which indicates that the R. Soongorica root system has better fractal characteristics in this region than in the other regions. (3) Total branching ra-tios of the R. Soongorica root system in arid regions of Hexi Corridor are smaller than that in the Jiuzhoutai semi-arid hilly and gully region of the Loess Plateau. This shows that root branching ability in the semi-arid region is stronger, and it decreases to some degree with increased drought. (4) The root connection lengths of R. soongorica root system are long in all habitats, but there are significant length differences between the different habitats. The root connection length at the Minqin windblown sand region is the longest. It is concluded that R. soongorica adapts to arid environments by decreasing root branching, decreasing root overlap and increasing root connection length, which makes its root branching pattern tend to be herringbone-like to reduce com-petition in root internal environment for nutrients and to enhance root absorption rate of nutrients, and ensure effective nutrition space. Thus the roots can absorb enough water and nutrients

  12. Ectopic expression of a stress-inducible glycosyltransferase from saffron enhances salt and oxidative stress tolerance in Arabidopsis while alters anchor root formation.

    Science.gov (United States)

    Ahrazem, Oussama; Rubio-Moraga, Angela; Trapero-Mozos, Almudena; Climent, María Fernanda López; Gómez-Cadenas, Aurelio; Gómez-Gómez, Lourdes

    2015-05-01

    Glycosyltransferases play diverse roles in cellular metabolism by modifying the activities of regulatory metabolites. Three stress-regulated UDP-glucosyltransferase-encoding genes have been isolated from the stigmas of saffron, UGT85U1, UGT85U2 and UGT85V1, which belong to the UGT85 family that includes members associated with stress responses and cell cycle regulation. Arabidopsis constitutively expressing UGT85U1 exhibited and increased anchor root development. No differences were observed in the timing of root emergence, in leaf, stem and flower morphology or flowering time. However, salt and oxidative stress tolerance was enhanced in these plants. Levels of glycosylated compounds were measured in these plants and showed changes in the composition of several indole-derivatives. Moreover, auxin levels in the roots were higher compared to wild type. The expression of several key genes related to root development and auxin homeostasis, including CDKB2.1, CDKB2.2, PIN2, 3 and 4; TIR1, SHR, and CYCD6, were differentially regulated with an increase of expression level of SHR, CYCD6, CDKB2.1 and PIN2. The obtained results showed that UGT85U1 takes part in root growth regulation via auxin signal alteration and the modified expression of cell cycle-related genes, resulting in significantly improved survival during oxidative and salt stress treatments.

  13. Parameterising root system growth models using 2D neutron radiography images

    Science.gov (United States)

    Schnepf, Andrea; Felderer, Bernd; Vontobel, Peter; Leitner, Daniel

    2013-04-01

    Root architecture is a key factor for plant acquisition of water and nutrients from soil. In particular in view of a second green revolution where the below ground parts of agricultural crops are important, it is essential to characterise and quantify root architecture and its effect on plant resource acquisition. Mathematical models can help to understand the processes occurring in the soil-plant system, they can be used to quantify the effect of root and rhizosphere traits on resource acquisition and the response to environmental conditions. In order to do so, root architectural models are coupled with a model of water and solute transport in soil. However, dynamic root architectural models are difficult to parameterise. Novel imaging techniques such as x-ray computed tomography, neutron radiography and magnetic resonance imaging enable the in situ visualisation of plant root systems. Therefore, these images facilitate the parameterisation of dynamic root architecture models. These imaging techniques are capable of producing 3D or 2D images. Moreover, 2D images are also available in the form of hand drawings or from images of standard cameras. While full 3D imaging tools are still limited in resolutions, 2D techniques are a more accurate and less expensive option for observing roots in their environment. However, analysis of 2D images has additional difficulties compared to the 3D case, because of overlapping roots. We present a novel algorithm for the parameterisation of root system growth models based on 2D images of root system. The algorithm analyses dynamic image data. These are a series of 2D images of the root system at different points in time. Image data has already been adjusted for missing links and artefacts and segmentation was performed by applying a matched filter response. From this time series of binary 2D images, we parameterise the dynamic root architecture model in the following way: First, a morphological skeleton is derived from the binary

  14. Controlled release of 6-aminonicotinamide from aligned, electrospun fibers alters astrocyte metabolism and dorsal root ganglia neurite outgrowth

    Science.gov (United States)

    Schaub, Nicholas J.; Gilbert, Ryan J.

    2011-08-01

    Following central nervous system (CNS) injury, activated astrocytes form a glial scar that inhibits the migration of axons ultimately leading to regeneration failure. Biomaterials developed for CNS repair can provide local delivery of therapeutics and/or guidance mechanisms to encourage cell migration into damaged regions of the brain or spinal cord. Electrospun fibers are a promising type of biomaterial for CNS injury since these fibers can direct cellular and axonal migration while slowly delivering therapy to the injury site. In this study, it was hypothesized that inclusion of an anti-metabolite, 6-aminonicotinamide (6AN), within poly-l-lactic acid electrospun fibers could attenuate astrocyte metabolic activity while still directing axonal outgrowth. Electrospinning parameters were varied to produce highly aligned electrospun fibers that contained 10% or 20% (w/w) 6AN. 6AN release from the fiber substrates occurred continuously over 2 weeks. Astrocytes placed onto drug-releasing fibers were less active than those cultured on scaffolds without 6AN. Dorsal root ganglia placed onto control and drug-releasing scaffolds were able to direct neurites along the aligned fibers. However, neurite outgrowth was stunted by fibers that contained 20% 6AN. These results show that 6AN release from aligned, electrospun fibers can decrease astrocyte activity while still directing axonal outgrowth.

  15. Artificial Plant Root System Growth for Distributed Optimization: Models and Emergent Behaviors

    Directory of Open Access Journals (Sweden)

    Su Weixing

    2016-01-01

    Full Text Available Plant root foraging exhibits complex behaviors analogous to those of animals, including the adaptability to continuous changes in soil environments. In this work, we adapt the optimality principles in the study of plant root foraging behavior to create one possible bio-inspired optimization framework for solving complex engineering problems. This provides us with novel models of plant root foraging behavior and with new methods for global optimization. This framework is instantiated as a new search paradigm, which combines the root tip growth, branching, random walk, and death. We perform a comprehensive simulation to demonstrate that the proposed model accurately reflects the characteristics of natural plant root systems. In order to be able to climb the noise-filled gradients of nutrients in soil, the foraging behaviors of root systems are social and cooperative, and analogous to animal foraging behaviors.

  16. Toxicity of canavanine in tomato (Solanum lycopersicum L.) roots is due to alterations in RNS, ROS and auxin levels.

    Science.gov (United States)

    Krasuska, Urszula; Andrzejczak, Olga; Staszek, Paweł; Borucki, Wojciech; Gniazdowska, Agnieszka

    2016-06-01

    Canavanine (CAN) is non-proteinogenic aminoacid and a structural analog of arginine (Arg). Naturally, CAN occurs in legumes e.g. jack bean and is considered as a strong allelochemical. As a selective inhibitor of inducible nitric oxide synthase in mammalians, it could act as a modifier of nitric oxide (NO) concentration in plants. Modifications in the content of endogenous reactive nitrogen species (RNS) and reactive oxygen species (ROS) influence root structure and architecture, being also under hormonal control. The aim of the work was to investigate regulation of root growth in tomato (Solanum lycopersicum L. cv. Malinowy Ożarowski) seedling by application of CAN at concentration (10 and 50 μM) leading to 50% or 100% restriction of root elongation. CAN at higher concentration led to slight DNA fragmentation, increased total RNA and protein level. Decline in total respiration rate after CAN supplementation was not associated with enhanced membrane permeability. Malformations in root morphology (shorter and thicker roots, limited number of lateral roots) were accompanied by modification in NO and ONOO(-) localization; determined mainly in peridermal cells and some border cells. Although, CAN resulted in low RNS production, addition of exogenous NO by usage of NO donors did not reverse its negative effect, nor recovery effect was detected after roots imbibition in Arg. To build up a comprehensive view on mode of action of CAN as root growth inhibitor, it was shown an elevated level of auxin. To summarize, we demonstrated several secondary mode of action of CAN, indicating its toxicity in plants linked to restriction in RNS formation accompanied by simultaneous overaccumulation of ROS.

  17. Alterations in cytosol free calcium in horseradish roots simultaneously exposed to lanthanum(III) and acid rain.

    Science.gov (United States)

    Zhang, Xuanbo; Wang, Lihong; Zhou, Anhua; Zhou, Qing; Huang, Xiaohua

    2016-04-01

    The extensive use of rare earth elements (REEs) has increased their environmental levels. REE pollution concomitant with acid rain in many agricultural regions can affect crop growth. Cytosol free calcium ions (Ca(2+)) play an important role in almost all cellular activities. However, no data have been reported regarding the role of cytosol free Ca(2+) in plant roots simultaneously exposed to REE and acid rain. In this study, the effects of exposures to lanthanum(III) and acid rain, independently and in combination, on cytosol free Ca(2+) levels, root activity, metal contents, biomass, cytosol pH and La contents in horseradish roots were investigated. The simultaneous exposures to La(III) and acid rain increased or decreased the cytosol free Ca(2+) levels, depending on the concentration of La(III), and these effects were more evident than independent exposure to La(III) or acid rain. In combined exposures, cytosol free Ca(2+) played an important role in the regulation of root activity, metal contents and biomass. These roles were closely related to La(III) dose, acid rain strength and treatment mode (independent exposure or simultaneous exposure). A low concentration of La(III) (20 mg L(-1)) could alleviate the adverse effects on the roots caused by acid rain, and the combined exposures at higher concentrations of La(III) and acid rain had synergic effects on the roots.

  18. Root system stabilization of sugarcane fertigated by subsurface drip using a minirhizotron

    Science.gov (United States)

    Yukitaka Pessinatti Ohashi, Augusto; Célia de Matos Pires, Regina; Barros de Oliveira Silva, Andre Luiz; Vasconcelos Ribeiro, Rafael

    2013-04-01

    To improve the efficiency of water use in irrigation practices and to provide information for modeling the knowledge of plants root system becomes necessary. The use of subsurface drip irrigation (SDI) in sugarcane cultivation is an interesting cultural practice to improve production and allow cultivation in marginal lands due to water deficits conditions. The SDI provides better water use efficiency, due to the water and nutrients application in root zone plants. However, despite of the agronomic importance, few studies about the root system of sugarcane were performed. The use of root scanner is an alternative to the evaluation of the root system, which enables the continuous study of the roots throughout the cycle and for many years, but data about the use of this method for sugarcane are still scarce. The aim of this study was to determine the time required for stabilization of the root system growth of sugarcane cultivar IACSP-5000 around the access tube in which images were captured. The field experiment was carried out in Campinas, São Paulo State, Brazil. The fertigation was applied by a subsurface drip system.. The soil moisture was monitored by capacitance probes. The pH and electrical conductivity of the soil solution were monitored through solution extractor. Two access tubes with 1.05 m length were used, with 7 days difference between installations. The images were captured at 110, 128, 136, 143 and 151 days after harvest cane-plant, in the second cycle (1st cane ratoon), with the Root Scanner CI-600 ™ and were analyzed the number of roots and root length in each layer in different depths in the soil profile by software RootSnap! ™. The results show that the highest rates of increase in the number and length of roots were observed in the first 27 days. Absolute growth rates of up to 81 mm day-1 and 38 mm day-1 were presented in 0-20 and 20-40 cm layer respectively. The number of roots stabilized from 27 days after installation of the tube, while

  19. A Study of Tensile Strength Tests of Arborous Species Root System in Forest Engineering Technique of Shallow Landslide

    Institute of Scientific and Technical Information of China (English)

    YANG Yonghong; LIU Shuzhen; WANG Chenghua; TANG Chuan

    2006-01-01

    One experiment was conducted, through tensile tests of Albazzia and Eucalypt roots culled from the fields. The other experiment was conducted, by testing anti-drawing strength of these root systems in the Albazzia and Eucalypt lands. These two experiments had an aim to give insights into the maximum tensile strength and anti-drawing strength of the root systems. Results indicated that the maximum tensile strength of root system is in an exponential relation with the diameter of root system while the maximum tensile strength is positively correlative with the diameter of root system. Anti-drawing force of root system together with root diameter, length, and soil bulk density are folded into a regression equation in an attempt to figure out the static friction coefficient between root system and its ambient soil.

  20. Salinity altered root distribution and increased diversity of bacterial communities in the rhizosphere soil of Jerusalem artichoke

    Science.gov (United States)

    Yang, Hui; Hu, Jinxiang; Long, Xiaohua; Liu, Zhaopu; Rengel, Zed

    2016-02-01

    The interaction between roots and bacterial communities in halophytic species is poorly understood. Here, we used Jerusalem artichoke cultivar Nanyu 1 (NY-1) to characterise root distribution patterns and determine diversity and abundance of bacteria in the rhizosphere soil under variable salinity. Root growth was not inhibited within the salinity range 1.2 to 1.9 g salt/kg, but roots were mainly confined to 0–20 cm soil layer vertically and 0–30 cm horizontally from the plant centre. Root concentrations of K+, Na+, Mg2+ and particularly Ca2+ were relatively high under salinity stress. High salinity stress decreased soil invertase and catalase activity. Using a next-generation, Illumina-based sequencing approach, we determined higher diversity of bacteria in the rhizosphere soil at high than low salinity. More than 15,500 valid reads were obtained, and Proteobacteria, Acidobacteria, Bacteroidetes and Actinobacteria predominated in all samples, accounting for >80% of the reads. On a genus level, 636 genera were common to the low and high salinity treatments at 0–5 cm and 5–10 cm depth. The abundance of Steroidobacter and Sphingomonas was significantly decreased by increasing salinity. Higher Shannon and Chao 1 indices with increasing severity of salt stress indicated that high salt stress increased diversity in the bacterial communities.

  1. Improvement of Growth and Periplocin Yield of Periploca sepium Adventitious Root Cultures by Altering Nitrogen Source Supply

    Institute of Scientific and Technical Information of China (English)

    ZHANG Jian; GAO Wen-yuan; WANG Juan; LI Xing-lin; XIAO Pei-gen

    2011-01-01

    Objective To increase the ultimate yield of periplocin in Periploca sepium adventitious root cultures by a two-stage culture based on nitrogen source.Methods Firstly,the effects of nitrogen source(NH-NO-)at different ratios and different total initial nitrogen amounts on the accumulation of biomass and secondary metabolites in adventitious root cultures of P sepium were investigated,and growth and production media for the two-stage culture based on the above results were established.Results The highest biomass and periplocin content were obtained in the culture medium of 15 mmol/L total nitrogen amount with NH-NO(1:2)and 30 mmol/L total nitrogen amount with nitrate as the sole nitrogen source.By adopting a fed-batch cultivation strategy,the dry weight adventitious root,periplocin content and yield were increased by 136%,108%,and 389%,respectively when compared with those of the control,reaching up to 8.13 g/L,157.15 μg/g,and 1277.63 μg/L,respectively.Furthermore,it was found that in the process of two-stage culture,the adventitious roots grew thicker significantly after they were transferred into production medium directly.Conclusion The ultimate yield of periplocin in P.sepium adventitious root cultures could be significantly increased by a two-stage culture based on nitrogen source.

  2. Cadmium Toxicity Induced Alterations in the Root Proteome of Green Gram in Contrasting Response towards Iron Supplement

    Directory of Open Access Journals (Sweden)

    Sowbiya Muneer

    2014-04-01

    Full Text Available Cadmium signifies a severe threat to crop productivity and green gram is a notably iron sensitive plant which shows considerable variation towards cadmium stress. A gel-based proteomics analysis was performed with the roots of green gram exposed to iron and cadmium combined treatments. The resulting data show that twenty three proteins were down-regulated in iron-deprived roots either in the absence (−Fe/−Cd or presence (−Fe/+Cd of cadmium. These down-regulated proteins were however well expressed in roots under iron sufficient conditions, even in the presence of cadmium (+Fe/+Cd. The functional classification of these proteins determined that 21% of the proteins are associated with nutrient metabolism. The other proteins in higher quantities are involved in either transcription or translation regulation, and the rest are involved in biosynthesis metabolism, antioxidant pathways, molecular chaperones and stress response. On the other hand, several protein spots were also absent in roots in response to iron deprivation either in absence (−Fe/−Cd or presence (−Fe/+Cd of cadmium but were well expressed in the presence of iron (+Fe/+Cd. Results suggest that green gram plants exposed to cadmium stress are able to change the nutrient metabolic balance in roots, but in the mean time regulate cadmium toxicity through iron supplements.

  3. Cadmium toxicity induced alterations in the root proteome of green gram in contrasting response towards iron supplement.

    Science.gov (United States)

    Muneer, Sowbiya; Hakeem, Khalid Rehman; Mohamed, Rozi; Lee, Jeong Hyun

    2014-04-15

    Cadmium signifies a severe threat to crop productivity and green gram is a notably iron sensitive plant which shows considerable variation towards cadmium stress. A gel-based proteomics analysis was performed with the roots of green gram exposed to iron and cadmium combined treatments. The resulting data show that twenty three proteins were down-regulated in iron-deprived roots either in the absence (-Fe/-Cd) or presence (-Fe/+Cd) of cadmium. These down-regulated proteins were however well expressed in roots under iron sufficient conditions, even in the presence of cadmium (+Fe/+Cd). The functional classification of these proteins determined that 21% of the proteins are associated with nutrient metabolism. The other proteins in higher quantities are involved in either transcription or translation regulation, and the rest are involved in biosynthesis metabolism, antioxidant pathways, molecular chaperones and stress response. On the other hand, several protein spots were also absent in roots in response to iron deprivation either in absence (-Fe/-Cd) or presence (-Fe/+Cd) of cadmium but were well expressed in the presence of iron (+Fe/+Cd). Results suggest that green gram plants exposed to cadmium stress are able to change the nutrient metabolic balance in roots, but in the mean time regulate cadmium toxicity through iron supplements.

  4. Activated expression of an Arabidopsis HD-START protein confers drought tolerance with improved root system and reduced stomatal density.

    Science.gov (United States)

    Yu, Hong; Chen, Xi; Hong, Yuan-Yuan; Wang, Yao; Xu, Ping; Ke, Sheng-Dong; Liu, Hai-Yan; Zhu, Jian-Kang; Oliver, David J; Xiang, Cheng-Bin

    2008-04-01

    Drought is one of the most important environmental constraints limiting plant growth and agricultural productivity. To understand the underlying mechanism of drought tolerance and to identify genes for improving this important trait, we conducted a gain-of-function genetic screen for improved drought tolerance in Arabidopsis thaliana. One mutant with improved drought tolerance was isolated and designated as enhanced drought tolerance1. The mutant has a more extensive root system than the wild type, with deeper roots and more lateral roots, and shows a reduced leaf stomatal density. The mutant had higher levels of abscisic acid and Pro than the wild type and demonstrated an increased resistance to oxidative stress and high levels of superoxide dismutase. Molecular genetic analysis and recapitulation experiments showed that the enhanced drought tolerance is caused by the activated expression of a T-DNA tagged gene that encodes a putative homeodomain-START transcription factor. Moreover, overexpressing the cDNA of the transcription factor in transgenic tobacco also conferred drought tolerance associated with improved root architecture and reduced leaf stomatal density. Therefore, we have revealed functions of the homeodomain-START factor that were gained upon altering its expression pattern by activation tagging and provide a key regulator that may be used to improve drought tolerance in plants.

  5. How can we harness quantitative genetic variation in crop root systems for agricultural improvement?

    Institute of Scientific and Technical Information of China (English)

    Christopher N. Topp; Adam L. Bray

    2016-01-01

    Root systems are a black box obscuring a comprehensive understanding of plant function, from the ecosystem scale down to the individual. In particular, a lack of knowledge about the genetic mechanisms and environmental effects that condition root system growth hinders our ability to develop the next generation of crop plants for improved agricultural productivity and sustainability. We discuss how the methods and metrics we use to quantify root systems can affect our ability to understand them, how we can bridge knowledge gaps and accelerate the derivation of structure-function relationships for roots, and why a detailed mecha-nistic understanding of root growth and function will be important for future agricultural gains.

  6. [Genetic effects of root extracts of Glycyrrhiza glabra L. on different test-systems].

    Science.gov (United States)

    Agabeĭli, R A

    2012-01-01

    The antimutagenic and geroprotective activities of root extracts of Glycyrrhiza glabra have been demonstrated both on plant test systems--Allium fistulosum L., Allium cepa L., Vicia faba L. and on animals--Vistar rats. The possibilities of the mobilization of Glycyrrhiza glabra root extracts as antimutagenic agents are discussed.

  7. Exposition on affine and elliptic root systems and elliptic Lie algebras

    CERN Document Server

    Azam, Saeid; Yousofzadeh, Malihe

    2009-01-01

    This is an exposition in order to give an explicit way to understand (1) a non-topological proof for an existence of a base of an affine root system, (2) a Serre-type definition of an elliptic Lie algebra with rank =>2, and (3) the isotropic root multiplicities of those elliptic Lie algebras.

  8. Use of an adaptive neuro-fuzzy system to characterize root distribution patterns

    Science.gov (United States)

    Root-soil relationships are pivotal to understanding crop growth and function in a changing environmental. Plant root systems are difficult to measure and remain understudied relative to above ground responses. High variation among field samples often leads to non-significance when standard statist...

  9. Advances and considerations in technologies for growing, imaging, and analyzing 3-D root system architecture

    Science.gov (United States)

    The ability of a plant to mine the soil for nutrients and water is determined by how, where, and when roots are arranged in the soil matrix. The capacity of plant to maintain or improve its yield under limiting conditions, such as nutrient deficiency or drought, is affected by root system architectu...

  10. Farming system context drives the value of deep wheat roots in semi-arid environments.

    Science.gov (United States)

    Lilley, Julianne M; Kirkegaard, John A

    2016-06-01

    The capture of subsoil water by wheat roots can make a valuable contribution to grain yield on deep soils. More extensive root systems can capture more water, but leave the soil in a drier state, potentially limiting water availability to subsequent crops. To evaluate the importance of these legacy effects, a long-term simulation analysis at eight sites in the semi-arid environment of Australia compared the yield of standard wheat cultivars with cultivars that were (i) modified to have root systems which extract more water at depth and/or (ii) sown earlier to increase the duration of the vegetative period and hence rooting depth. We compared simulations with and without annual resetting of soil water to investigate the legacy effects of drier subsoils related to modified root systems. Simulated mean yield benefits from modified root systems declined from 0.1-0.6 t ha(-1) when annually reset, to 0-0.2 t ha(-1) in the continuous simulation due to a legacy of drier soils (mean 0-32mm) at subsequent crop sowing. For continuous simulations, predicted yield benefits of >0.2 t ha(-1) from more extensive root systems were rare (3-10% of years) at sites with shallow soils (extensively has implications for the farming system productivity, and the crop sequence must be managed tactically to optimize overall system benefits.

  11. Local NO3- or NH4+ supply modifies the root system architecture of Cedrus atlantica seedlings grown in a split-root device.

    Science.gov (United States)

    Boukcim, Hassan; Pagès, Loïc; Mousain, Daniel

    2006-12-01

    To study the effects of local nitrate or ammonium supply on the architecture of the Cedrus atlantica root system, cedar seedlings were grown in split-root boxes in a growth chamber. In each box-compartment, roots were fertilized with a solution containing nitrogen, either as nitrate [Ca(NO(3))(2)] or ammonium (NH(4)Cl), supplied at 0.1 or 5.0mM. For each seedling, the shoot growth was measured twice a week for 3 months. The root system architecture was also recorded twice a week by tracing the root elongation through the transparent face of the root observation boxes. The apical diameter of the tap-root relay and that of a representative sample of lateral roots were recorded once a month using a monocular magnifier. The increase of ammonium or nitrate concentration in the nutrient solution has significantly enhanced the production of lateral roots on the tap-root relay. After 90 days of culture, percentages of short lateral roots obtained with nitrate were higher than those obtained using ammonium. A preferential carbon allocation to the shoots was also obtained with an increasing nitrogen supply. Until the 40th day of culture, the elongation of lateral roots was similar for all treatments and ranged from 0.25 to 0.5 cm day(-1). From the 40th day to the 95th day, significant differences were observed between the compared modes and maximum elongation rates were obtained with 5mM NH(4)(+) (2.18 cm day(-1)) and 5mM NO(3)(-) (1.18 cm day(-1)). Local applications of nitrate and ammonium at a low or a high concentration had local effects on elongation and branching of the root system in the fertilized compartment. Contrasting effects of ammonium and nitrate were observed on the apical diameter of tap-roots and lateral roots. The root-split culture device confirmed that nitrate had local effects on the architecture of the C. atlantica root system.

  12. Integrated approaches to root disease management in organic farming systems

    NARCIS (Netherlands)

    Bruggen, van A.H.C.; Termorshuizen, A.J.

    2003-01-01

    Conventional agriculture has had major environmental impacts, in particular with respect to soil degradation. Soil structure, fertility, microbial and faunal biodiversity have declined, and root diseases are common unless genetic resistance, soil fumigation and/or seed treatments are used. Primarily

  13. The incidence of root microcracks caused by 3 different single-file systems versus the protaper system

    NARCIS (Netherlands)

    Liu, R.; Hou, B.X.; Wesselink, P.R.; Wu, M.K.; Shemesh, H.

    2013-01-01

    Introduction The aim of this study was to compare the incidence of root cracks observed at the apical root surface and/or in the canal wall after canal instrumentation with 3 single-file systems and the ProTaper system (Dentsply Maillefer, Ballaigues, Switzerland). Methods One hundred mandibular inc

  14. Transgenic modification of gai or rg/1 causes dwarfing and alters gibberellins, root growth, and metabolite profiles in Populus

    Energy Technology Data Exchange (ETDEWEB)

    Tschaplinski, Timothy J [ORNL; Busov, V. [Michigan Technological University; Meilan, R [Purdue University; Pearce, D [University of Lethbridge; Rood, s [University of Lethbridge; Ma, C [Oregon State University; Strauss, S [Oregon State University

    2006-01-01

    In Arabidopsis and other plants, gibberellin (GA)-regulated responses are mediated by proteins including GAI, RGA and RGL1-3 that contain a functional DELLA domain. Through transgenic modification, we found that DELLA-less versions of GAI (gai) and RGL1 (rgl1) in a Populus tree have profound, dominant effects on phenotype, producing pleiotropic changes in morphology and metabolic profiles. Shoots were dwarfed, likely via constitutive repression of GA-induced elongation, whereas root growth was promoted two- to threefold in vitro. Applied GA{sub 3} inhibited adventitious root production in wild-type poplar, but gai/rgl1 poplars were unaffected by the inhibition. The concentrations of bioactive GA{sub 1} and GA{sub 4} in leaves of gai- and rgl1-expressing plants increased 12- to 64-fold, while the C{sub 19} precursors of GA{sub 1} (GA{sub 53}, GA{sub 44} and GA{sub 19}) decreased three- to ninefold, consistent with feedback regulation of GA 20-oxidase in the transgenic plants. The transgenic modifications elicited significant metabolic changes. In roots, metabolic profiling suggested increased respiration as a possible mechanism of the increased root growth. In leaves, we found metabolite changes suggesting reduced carbon flux through the lignin biosynthetic pathway and a shift towards allocation of secondary storage and defense metabolites, including various phenols, phenolic glucosides, and phenolic acid conjugates.

  15. The sympathetic nervous system alterations in human hypertension.

    Science.gov (United States)

    Grassi, Guido; Mark, Allyn; Esler, Murray

    2015-03-13

    Several articles have dealt with the importance and mechanisms of the sympathetic nervous system alterations in experimental animal models of hypertension. This review addresses the role of the sympathetic nervous system in the pathophysiology and therapy of human hypertension. We first discuss the strengths and limitations of various techniques for assessing the sympathetic nervous system in humans, with a focus on heart rate, plasma norepinephrine, microneurographic recording of sympathetic nerve traffic, and measurements of radiolabeled norepinephrine spillover. We then examine the evidence supporting the importance of neuroadrenergic factors as promoters and amplifiers of human hypertension. We expand on the role of the sympathetic nervous system in 2 increasingly common forms of secondary hypertension, namely hypertension associated with obesity and with renal disease. With this background, we examine interventions of sympathetic deactivation as a mode of antihypertensive treatment. Particular emphasis is given to the background and results of recent therapeutic approaches based on carotid baroreceptor stimulation and radiofrequency ablation of the renal nerves.

  16. Kinetics of constant gravitropic stimulus responses in Arabidopsis roots using a feedback system

    Science.gov (United States)

    Mullen, J. L.; Wolverton, C.; Ishikawa, H.; Evans, M. L.

    2000-01-01

    The study of gravitropism is hindered by the fact that as a root responds, the gravitational stimulus changes. Using a feedback system to connect a rotating stage platform to a video digitizer system, we were able to maintain a constant angle of gravistimulation to Arabidopsis roots for long time periods. The rate of curvature approximated the sine rule for angles of stimulation between 20 degrees and 120 degrees. For a given angle of stimulation, the rate of curvature also remained constant, with no observed diminishment of the response. Although previous reports of Arabidopsis root gravitropism suggest latent periods of approximately 30 min, using a smooth mechanical stage to reorient the root, we observed a mean time lag of approximately 10 min. This more rapid onset of curvature can, in part, be explained by reduced mechanical perturbation during the process of gravistimulation. This suggests that mechanical stimulation associated with rapid root re-orientation may confound investigations of early gravitropic events.

  17. Quantification of root gravitropic response using a constant stimulus feedback system.

    Science.gov (United States)

    Wolverton, Chris

    2015-01-01

    Numerous software packages now exist for quantifying root growth responses, most of which analyze a time resolved sequence of images ex post facto. However, few allow for the real-time analysis of growth responses. The system in routine use in our lab allows for real-time growth analysis and couples this to positional feedback to control the stimulus experienced by the responding root. This combination allows us to overcome one of the confounding variables in studies of root gravity response. Seedlings are grown on standard petri plates attached to a vertical rotating stage and imaged using infrared illumination. The angle of a particular region of the root is determined by image analysis, compared to the prescribed angle, and any corrections in positioning are made by controlling a stepper motor. The system allows for the long-term stimulation of a root at a constant angle and yields insights into the gravity perception and transduction machinery not possible with other approaches.

  18. Transposon-mediated alteration of TaMATE1B expression in wheat confers constitutive citrate efflux from root apices.

    Science.gov (United States)

    Tovkach, Andriy; Ryan, Peter R; Richardson, Alan E; Lewis, David C; Rathjen, Tina M; Ramesh, Sunita; Tyerman, Stephen D; Delhaize, Emmanuel

    2013-02-01

    The TaMATE1B gene (for multidrug and toxic compound extrusion) from wheat (Triticum aestivum) was isolated and shown to encode a citrate transporter that is located on the plasma membrane. TaMATE1B expression in roots was induced by iron deficiency but not by phosphorus deficiency or aluminum treatment. The coding region of TaMATE1B was identical in a genotype showing citrate efflux from root apices (cv Carazinho) to one that lacked citrate efflux (cv Egret). However, sequence upstream of the coding region differed between these two genotypes in two ways. The first difference was a single-nucleotide polymorphism located approximately 2 kb upstream from the start codon in cv Egret. The second difference was an 11.1-kb transposon-like element located 25 bp upstream of the start codon in cv Carazinho that was absent from cv Egret. The influence of these polymorphisms on TaMATE1B expression was investigated using fusions to green fluorescent protein expressed in transgenic lines of rice (Oryza sativa). Fluorescence measurements in roots of rice indicated that 1.5- and 2.3-kb regions upstream of TaMATE1B in cv Carazinho (which incorporated 3' regions of the transposon-like element) generated 20-fold greater expression in the apical 1 mm of root compared with the native promoter in cv Egret. By contrast, fluorescence in more mature tissues was similar in both cultivars. The presence of the single-nucleotide polymorphism alone consistently generated 2-fold greater fluorescence than the cv Egret promoter. We conclude that the transposon-like element in cv Carazinho extends TaMATE1B expression to the root apex, where it confers citrate efflux and enhanced aluminum tolerance.

  19. Phylloxera (Daktulosphaira vitifoliae Fitch) alters the carbohydrate metabolism in root galls to allowing the compatible interaction with grapevine (Vitis ssp.) roots.

    Science.gov (United States)

    Griesser, Michaela; Lawo, Nora Caroline; Crespo-Martinez, Sara; Schoedl-Hummel, Katharina; Wieczorek, Krzysztof; Gorecka, Miroslawa; Liebner, Falk; Zweckmair, Thomas; Stralis Pavese, Nancy; Kreil, David; Forneck, Astrid

    2015-05-01

    Gall forming phylloxera may compete for nutrients with meristematic tissues and develop heterotrophic structures that act as carbon sinks. In this work, we studied the underlying starch metabolism, sink-source translocation of soluble sugars towards and within root galls. We demonstrated that nodosities store carbohydrates by starch accumulation and monitored the expression of genes involved in the starch metabolic. Thereby we proved that the nodosity is symplastically connected to the source tissues through its development and that the starch metabolism is significantly affected to synthesize and degrade starch within the gall. Genes required for starch biosynthesis and degradation are up-regulated. Among the carbohydrate transporters the expression of a glucose-6-phosphate translocater, one sucrose transporter and two SWEET proteins were increases, whereas hexose transporters, tonoplast monosaccharide transporter and Erd6-like sugar transporters were decreased. We found general evidence for plant response to osmotic stress in the nodosity as previously suggested for gall induction processes. We conclude that nodosities are heterogenous plant organs that accumulate starch to serve as temporary storage structure that is gradually withdrawn by phylloxera. Phylloxera transcriptionally reprograms gall tissues beyond primary metabolism and included downstream secondary processes, including response to osmotic stress.

  20. Towards quantitative root hydraulic phenotyping: novel mathematical functions to calculate plant-scale hydraulic parameters from root system functional and structural traits.

    Science.gov (United States)

    Meunier, F; Couvreur, V; Draye, X; Vanderborght, J; Javaux, M

    2017-03-02

    Predicting root water uptake and plant transpiration is crucial for managing plant irrigation and developing drought-tolerant root system ideotypes (i.e. ideal root systems). Today, three-dimensional structural functional models exist, which allows solving the water flow equation in the soil and in the root systems under transient conditions and in heterogeneous soils. Yet, these models rely on the full representation of the three-dimensional distribution of the root hydraulic properties, which is not always easy to access. Recently, new models able to represent this complex system without the full knowledge of the plant 3D hydraulic architecture and with a limited number of parameters have been developed. However, the estimation of the macroscopic parameters a priori still requires a numerical model and the knowledge of the full three-dimensional hydraulic architecture. The objective of this study is to provide analytical mathematical models to estimate the values of these parameters as a function of local plant general features, like the distance between laterals, the number of primaries or the ratio of radial to axial root conductances. Such functions would allow one to characterize the behaviour of a root system (as characterized by its macroscopic parameters) directly from averaged plant root traits, thereby opening new possibilities for developing quantitative ideotypes, by linking plant scale parameters to mean functional or structural properties. With its simple form, the proposed model offers the chance to perform sensitivity and optimization analyses as presented in this study.

  1. Evaluation of the morphological alteration of the root surface radiated with a diode laser; Avaliacao da alteracao morfologica da superficie cimentaria irradiada com laser de diodo

    Energy Technology Data Exchange (ETDEWEB)

    Gulin, Mauricio

    2003-07-01

    The diode laser has been studied for periodontal therapy, as much for removal of calculus as for microbial reduction of periodontal pockets, as well as the visible analgesic effects and biomodulation capacity. For this reason the purpose of this study was to evaluate the morphological alteration of the root surface after radiation with the diode laser, 808 nm through analysis by scanning electron microscopy (SEM). Besides this, to verify the temperature variations caused during the radiation, a thermometer put into the dentinal wall of the root canal was used. In all, 18 teeth were used, 15 of which for the SEM study, and the other 3 were used to temperature variation analysis. The 25 samples were scraped on the root surface and planed with manual instruments. The other 5 were not subjected to any type of treatment. This, 6 groups of 5 samples each were formed. Control Group C whose samples had not received any treatment; Control Group C 1 was only scraped and polished conventionally with Hu-Friedy Gracey curettes 5 and 6; the other samples groups L1, L2, L3, L4 were radiated by diode laser using parameters of power 1,0 W; 1,2 W; 1,4 W; and 1,6 W respectively, 2 times for 10 seconds with 20 seconds intervals between each radiation in continuous mode. The results with relation to the increase of temperature in the interior of the root canal demonstrated that there was an increase of more than 5 degree Celsius. The results of the scanning electron microscope analysis of Control Group C demonstrated great irregularity and ridges on the root surface, with the presence of a dentine layer. Control Group C1 presented a similar aspect to Group L 1's, smoother and more homogeneous surface. Groups L2, L3, and L4 presented scratches alternating with smoother areas showing that fiber contacted the surface of the sample. The results reconfirmed the necessity of further studies using diode laser, with a beam of light emitted in an interrupted mode to improve the control of

  2. Alteration in expression of hormone-related genes in wild emmer wheat roots associated with drought adaptation mechanisms.

    Science.gov (United States)

    Krugman, Tamar; Peleg, Zvi; Quansah, Lydia; Chagué, Véronique; Korol, Abraham B; Nevo, Eviatar; Saranga, Yehoshua; Fait, Aaron; Chalhoub, Boulos; Fahima, Tzion

    2011-12-01

    Transcriptomic and metabolomic profiles were used to unravel drought adaptation mechanisms in wild emmer wheat (Triticum turgidum ssp. dicoccoides), the progenitor of cultivated wheat, by comparing the response to drought stress in roots of genotypes contrasting in drought tolerance. The differences between the drought resistant (R) and drought susceptible (S) genotypes were characterized mainly by shifts in expression of hormone-related genes (e.g., gibberellins, abscisic acid (ABA) and auxin), including biosynthesis, signalling and response; RNA binding; calcium (calmodulin, caleosin and annexin) and phosphatidylinositol signalling, in the R genotype. ABA content in the roots of the R genotype was higher in the well-watered treatment and increased in response to drought, while in the S genotype ABA was invariant. The metabolomic profiling revealed in the R genotype a higher accumulation of tricarboxylic acid cycle intermediates and drought-related metabolites, including glucose, trehalose, proline and glycine. The integration of transcriptomics and metabolomics results indicated that adaptation to drought included efficient regulation and signalling pathways leading to effective bio-energetic processes, carbon metabolism and cell homeostasis. In conclusion, mechanisms of drought tolerance were identified in roots of wild emmer wheat, supporting our previous studies on the potential of this genepool as a valuable source for novel candidate genes to improve drought tolerance in cultivated wheat.

  3. Tree species diversity interacts with elevated CO2 to induce a greater root system response.

    Science.gov (United States)

    Smith, Andrew R; Lukac, Martin; Bambrick, Michael; Miglietta, Franco; Godbold, Douglas L

    2013-01-01

    As a consequence of land-use change and the burning of fossil fuels, atmospheric concentrations of CO2 are increasing and altering the dynamics of the carbon cycle in forest ecosystems. In a number of studies using single tree species, fine root biomass has been shown to be strongly increased by elevated CO2 . However, natural forests are often intimate mixtures of a number of co-occurring species. To investigate the interaction between tree mixture and elevated CO2 , Alnus glutinosa, Betula pendula and Fagus sylvatica were planted in areas of single species and a three species polyculture in a free-air CO2 enrichment study (BangorFACE). The trees were exposed to ambient or elevated CO2 (580 μmol mol(-1) ) for 4 years. Fine and coarse root biomass, together with fine root turnover and fine root morphological characteristics were measured. Fine root biomass and morphology responded differentially to the elevated CO2 at different soil depths in the three species when grown in monocultures. In polyculture, a greater response to elevated CO2 was observed in coarse roots to a depth of 20 cm, and fine root area index to a depth of 30 cm. Total fine root biomass was positively affected by elevated CO2 at the end of the experiment, but not by species diversity. Our data suggest that existing biogeochemical cycling models parameterized with data from species grown in monoculture may be underestimating the belowground response to global change.

  4. [Establishment of culture system of Silybum marianum hairy roots and determination of silybin].

    Science.gov (United States)

    Zhang, Shu-Li; Zhang, Tian-Zhu; Yang, Shi-Hai

    2014-06-01

    This research uses six Agrobacterium rhizogenes R1601, R15384, R1000, A4, R1025 and R1 to infect silymarin explants to induce hairy roots and silibin. All of the six A. rhizogenes can induce Silybum marianum to generate hairy roots and the A. rhizogene A4 shows comparatively high infection on the plant. This research determines the condition to induce silymarin hairy roots by the factors of infection time, pre-culturing, co-culturing and pH value. The fact that MS liquid medium fits the proliferation of silymarin hairy roots is determined. Through PCR molecular identification, it can be seen that the DNA plasmids in the A. rhizogenes are successfully integrated into the genome of transformed roots. Using liquid chromatography, it is determined that the silibin content in silymarin hairy roots is 2.5 times that in the plant In this research, the silymarin hairy roots culturing system is established, which lays a foundation for the study of culturing silymarin hairy roots and producing silibin.

  5. Altered balance in the autonomic nervous system in schizophrenic patients

    DEFF Research Database (Denmark)

    Nielsen, B M; Mehlsen, J; Behnke, K

    1988-01-01

    .05). Heart-rate response to inspiration was greater in non-medicated schizophrenics compared to normal subjects (P less than 0.05), whereas no difference was found between medicated and non-medicated schizophrenics. The results show that the balance in the autonomic nervous system is altered in schizophrenic...... patients with a hyperexcitability in both the sympathetic and the parasympathetic division. Our study has thus indicated a dysfunction in the autonomic nervous system per se and the previous interpretations of attentional orienting responses in schizophrenia is questioned. Medication with neuroleptics......The aim of the present study was to evaluate the autonomic nervous function in schizophrenic patients. Twenty-eight patients (29 +/- 6 years) diagnosed as schizophrenics and in stable medication were included, together with ten schizophrenic patients (25 +/- 5 years) who were unmedicated. Eleven...

  6. Primary root protophloem differentiation requires balanced phosphatidylinositol-4,5-biphosphate levels and systemically affects root branching.

    NARCIS (Netherlands)

    Rodriguez-Villalon, A.; Gujas, B.; van Wijk, R.; Munnik, T.; Hardtke, C.S.

    2015-01-01

    Protophloem is a specialized vascular tissue in growing plant organs, such as root meristems. In Arabidopsis mutants with impaired primary root protophloem differentiation, brevis radix (brx) and octopus (ops), meristematic activity and consequently overall root growth are strongly reduced. Second s

  7. Method and Apparatus Providing Deception and/or Altered Operation in an Information System Operating System

    Science.gov (United States)

    Cohen, Fred; Rogers, Deanna T.; Neagoe, Vicentiu

    2008-10-14

    A method and/or system and/or apparatus providing deception and/or execution alteration in an information system. In specific embodiments, deceptions and/or protections are provided by intercepting and/or modifying operation of one or more system calls of an operating system.

  8. Root endophyte Piriformospora indica DSM 11827 alters plant morphology, enhances biomass and antioxidant activity of medicinal plant Bacopa monniera.

    Science.gov (United States)

    Prasad, Ram; Kamal, Shwet; Sharma, Pradeep K; Oelmüller, Ralf; Varma, Ajit

    2013-12-01

    Unorganized collections and over exploitation of naturally occurring medicinal plant Bacopa monniera is leading to rapid depletion of germplasm and is posing a great threat to its survival in natural habitats. The species has already been listed in the list of highly threatened plants of India. This calls for micropropagation based multiplication of potential accessions and understanding of their mycorrhizal associations for obtaining plants with enhanced secondary metabolite contents. The co-cultivation of B. monniera with axenically cultivated root endophyte Piriformospora indica resulted in growth promotion, increase in bacoside content, antioxidant activity and nuclear hypertrophy of this medicinal plant.

  9. 76 FR 4449 - Privacy Act of 1974; Report of Modified or Altered System of Records

    Science.gov (United States)

    2011-01-25

    ... Altered System of Records AGENCY: Scientific Resources Program, Material, Data and Specimen Handling...). ACTION: Notification of Proposed Altered System of Records. SUMMARY: The Department of Health and Human..., Federal holidays excepted. SUPPLEMENTARY INFORMATION: NCID proposes to alter System of Records, No....

  10. Root restriction: A tool for improving volume utilization efficiency in bioregenerative life-support systems

    Science.gov (United States)

    Graham, Thomas; Wheeler, Raymond

    2016-06-01

    The objective of this study was to evaluate root restriction as a tool to increase volume utilization efficiency in spaceflight crop production systems. Bell pepper plants (Capsicum annuum cv. California Wonder) were grown under restricted rooting volume conditions in controlled environment chambers. The rooting volume was restricted to 500 ml and 60 ml in a preliminary trial, and 1500 ml (large), 500 ml (medium), and 250 ml (small) for a full fruiting trial. To reduce the possible confounding effects of water and nutrient restrictions, care was taken to ensure an even and consistent soil moisture throughout the study, with plants being watered/fertilized several times daily with a low concentration soluble fertilizer solution. Root restriction resulted in a general reduction in biomass production, height, leaf area, and transpiration rate; however, the fruit production was not significantly reduced in the root restricted plants under the employed environmental and horticultural conditions. There was a 21% reduction in total height and a 23% reduction in overall crown diameter between the large and small pot size in the fruiting study. Data from the fruiting trial were used to estimate potential volume utilization efficiency improvements for edible biomass in a fixed production volume. For fixed lighting and rooting hardware situations, the majority of improvement from root restriction was in the reduction of canopy area per plant, while height reductions could also improve volume utilization efficiency in high stacked or vertical agricultural systems.

  11. Deep phenotyping of coarse root architecture in R. pseudoacacia reveals that tree root system plasticity is confined within its architectural model.

    Science.gov (United States)

    Danjon, Frédéric; Khuder, Hayfa; Stokes, Alexia

    2013-01-01

    This study aims at assessing the influence of slope angle and multi-directional flexing and their interaction on the root architecture of Robinia pseudoacacia seedlings, with a particular focus on architectural model and trait plasticity. 36 trees were grown from seed in containers inclined at 0° (control) or 45° (slope) in a glasshouse. The shoots of half the plants were gently flexed for 5 minutes a day. After 6 months, root systems were excavated and digitized in 3D, and biomass measured. Over 100 root architectural traits were determined. Both slope and flexing increased significantly plant size. Non-flexed trees on 45° slopes developed shallow roots which were largely aligned perpendicular to the slope. Compared to the controls, flexed trees on 0° slopes possessed a shorter and thicker taproot held in place by regularly distributed long and thin lateral roots. Flexed trees on the 45° slope also developed a thick vertically aligned taproot, with more volume allocated to upslope surface lateral roots, due to the greater soil volume uphill. We show that there is an inherent root system architectural model, but that a certain number of traits are highly plastic. This plasticity will permit root architectural design to be modified depending on external mechanical signals perceived by young trees.

  12. Mephedrone alters basal ganglia and limbic neurotensin systems.

    Science.gov (United States)

    German, Christopher L; Hoonakker, Amanda H; Fleckenstein, Annette E; Hanson, Glen R

    2014-08-01

    Mephedrone (4-methylmethcathinone) is a synthetic cathinone designer drug that alters pre-synaptic dopamine (DA) activity like many psychostimulants. However, little is known about the post-synaptic dopaminergic impacts of mephedrone. The neuropeptide neurotensin (NT) provides inhibitory feedback for basal ganglia and limbic DA pathways, and post-synaptic D1 -like and D2 -like receptor activity affects NT tissue levels. This study evaluated how mephedrone alters basal ganglia and limbic system NT content and the role of NT receptor activation in drug consumption behavior. Four 25 mg/kg injections of mephedrone increased NT content in basal ganglia (striatum, substantia nigra and globus pallidus) and the limbic regions (nucleus accumbens core), while a lower dosage (5 mg/kg/injection) only increased striatal NT content. Mephedrone-induced increases in basal ganglia NT levels were mediated by D1 -like receptors in the striatum and the substantia nigra by both D1 -like and D2 -like receptors in the globus pallidus. Mephedrone increased substance P content, another neuropeptide, in the globus pallidus, but not in the dorsal striatum or substantia nigra. Finally, the NT receptor agonist PD149163 blocked mephedrone self-administration, suggesting reduced NT release, as indicated by increased tissue levels, likely contributing to patterns of mephedrone consumption.

  13. BACE1-Deficient Mice Exhibit Alterations in Immune System Pathways.

    Science.gov (United States)

    Stertz, L; Contreras-Shannon, V; Monroy-Jaramillo, N; Sun, J; Walss-Bass, C

    2016-12-21

    BACE1 encodes for the beta-site amyloid precursor protein cleaving enzyme 1 or β-secretase. Genetic deletion of Bace1 leads to behavioral alterations and affects midbrain dopaminergic signaling and memory processes. In order to further understand the role of BACE1 in brain function and behavior, we performed microarray transcriptome profiling and gene pathway analysis in the hippocampus of BACE1-deficient mice compared to wild type. We identified a total of 91 differentially expressed genes (DEGs), mostly enriched in pathways related to the immune and inflammation systems, particularly IL-9 and NF-κB activation pathways. Serum levels of IL-9 were elevated in BACE1-deficient mice. Our network analysis supports an intimate connection between immune response via NF-κB and BACE1 signaling through the NRG1/Akt1 pathway. Our findings warrant future mechanistic studies to determine if BACE1 signaling and the IL-9 pathway interact to alter behavior and brain function. This study opens new avenues in the investigation of hippocampus-related neuroimmunological and neuroinflammation-associated disorders.

  14. System analysis of microRNAs in the development and aluminium stress responses of the maize root system.

    Science.gov (United States)

    Kong, Xiangpei; Zhang, Maolin; Xu, Xiangbo; Li, Xiaoming; Li, Cuiling; Ding, Zhaojun

    2014-10-01

    MicroRNAs (miRNAs) are a class of regulatory small RNAs (sRNAs) that down-regulate target genes through mRNA cleavage or translational inhibition. miRNA is known to play an important role in the root development and environmental responses in both the Arabidopsis and rice. However, little information is available to form a complete view of miRNAs in the development of the maize root system and Al stress responses in maize. Four sRNA libraries were generated and sequenced from the early developmental stage of primary roots (PRY), the later developmental stage of maize primary roots (PRO), seminal roots (SR) and crown roots (CR). Through integrative analysis, we identified 278 miRNAs (246 conserved and 32 novel ones) and found that the expression patterns of miRNAs differed dramatically in different maize roots. The potential targets of the identified conserved and novel miRNAs were also predicted. In addition, our data showed that CR is more resistant to Al stress compared with PR and SR, and the differentially expressed miRNAs are likely to play significant roles in different roots in response to environmental stress such as Al stress. Here, we demonstrate that the expression patterns of miRNAs are highly diversified in different maize roots. The differentially expressed miRNAs are correlated with both the development and environmental responses in the maize root. This study not only improves our knowledge about the roles of miRNAs in maize root development but also reveals the potential role of miRNAs in the environmental responses of different maize roots.

  15. Construction of Rural Grass-roots Water Conservancy Service System in the Context of Institutional Changes

    Institute of Scientific and Technical Information of China (English)

    Ning WANG

    2015-01-01

    At present,it is urgent to solve problems of reforming and improving grass-roots water conservancy management mode in rural areas and improving rural water conservancy public service ability. Through analyzing institutional changes of grass-roots water conservancy management in rural areas,this paper discussed current situations and outstanding problems in grass-roots water conservancy services in rural areas of Kunming City. On the basis of current situations and problems,it came up with policy recommendations from reform of management institutions,reform of personnel system,construction of human resources,development of rural water use cooperation organizations,and improvement of fund input mechanism,to build rural grass-roots water conservancy service system.

  16. Salicylic acid prevents Trichoderma harzianum from entering the vascular system of roots.

    Science.gov (United States)

    Alonso-Ramírez, Ana; Poveda, Jorge; Martín, Ignacio; Hermosa, Rosa; Monte, Enrique; Nicolás, Carlos

    2014-10-01

    Trichoderma is a soil-borne fungal genus that includes species with a significant impact on agriculture and industrial processes. Some Trichoderma strains exert beneficial effects in plants through root colonization, although little is known about how this interaction takes place. To better understand this process, the root colonization of wild-type Arabidopsis and the salicylic acid (SA)-impaired mutant sid2 by a green fluorescent protein (GFP)-marked Trichoderma harzianum strain was followed under confocal microscopy. Trichoderma harzianum GFP22 was able to penetrate the vascular tissue of the sid2 mutant because of the absence of callose deposition in the cell wall of root cells. In addition, a higher colonization of sid2 roots by GFP22 compared with that in Arabidopsis wild-type roots was detected by real-time polymerase chain reaction. These results, together with differences in the expression levels of plant defence genes in the roots of both interactions, support a key role for SA in Trichoderma early root colonization stages. We observed that, without the support of SA, plants were unable to prevent the arrival of the fungus in the vascular system and its spread into aerial parts, leading to later collapse.

  17. Iron- and ferritin-dependent reactive oxygen species distribution: impact on Arabidopsis root system architecture.

    Science.gov (United States)

    Reyt, Guilhem; Boudouf, Soukaina; Boucherez, Jossia; Gaymard, Frédéric; Briat, Jean-Francois

    2015-03-01

    Iron (Fe) homeostasis is integrated with the production of reactive oxygen species (ROS), and distribution at the root tip participates in the control of root growth. Excess Fe increases ferritin abundance, enabling the storage of Fe, which contributes to protection of plants against Fe-induced oxidative stress. AtFer1 and AtFer3 are the two ferritin genes expressed in the meristematic zone, pericycle and endodermis of the Arabidopsis thaliana root, and it is in these regions that we observe Fe stained dots. This staining disappears in the triple fer1-3-4 ferritin mutant. Fe excess decreases primary root length in the same way in wild-type and in fer1-3-4 mutant. In contrast, the Fe-mediated decrease of lateral root (LR) length and density is enhanced in fer1-3-4 plants due to a defect in LR emergence. We observe that this interaction between excess Fe, ferritin, and root system architecture (RSA) is in part mediated by the H2O2/O2·- balance between the root cell proliferation and differentiation zones regulated by the UPB1 transcription factor. Meristem size is also decreased in response to Fe excess in ferritin mutant plants, implicating cell cycle arrest mediated by the ROS-activated SMR5/SMR7 cyclin-dependent kinase inhibitors pathway in the interaction between Fe and RSA.

  18. Root system distribution and yield of 'Conilon' coffee propagated by seeds or cuttings

    Directory of Open Access Journals (Sweden)

    Fábio Luiz Partelli

    2014-05-01

    Full Text Available The objective of this work was to evaluate the root system distribution and the yield of 'Conilon' coffee (Coffea canephora propagated by seeds or cuttings. The experiment was carried out with 2x1 m spacing, in an Oxisol with sandy clay loam texture. A randomized complete block design was used, following a 2x9x6 factorial arrangement, with two propagation methods (seeds and cuttings, nine sampling spacings (0.15, 0.30, 0.45, 0.60, 0.75, and 0.90 m between rows, and 0.15, 0.30, and 0.45 between plants within rows, six soil depths (0.10-0.20, 0.20-0.30, 0.30-0.40, 0.40-0.50, and 0.50-0.60 m, and six replicates. Soil cores (27 cm3 with roots were taken from 12 experimental units, 146 months after planting. The surface area of the root system and root diameter, length, and volume were assessed for 13 years and, then, correlated with grain yield. The highest fine root concentration occurred at the superficial soil layers. The variables used to characterize the root system did not differ between propagation methods. Moreover, no differences were observed for net photosynthetic CO2 assimilation rate, stomatal conductance, internal CO2 concentrations, and instantaneous water-use efficiency in the leaves. Cutting-propagated plants were more productive than seed-propagated ones.

  19. Assessment of the Centralization of Root Canal Preparation with Rotary Systems

    Science.gov (United States)

    Lopes, Daniela Siqueira; Pessoa, Mariana Albuquerque Veiga

    2016-01-01

    Objective Apical deviations are important factors in endodontic therapy, since they can cause the treatment failure. The aim of the present study was to determine the centering capacity of ProTaper Universal™, Twisted File™ and Revo-S® rotary systems using cone beam computed tomography analysis before and after the instrumentation of root canals. Materials and Methods Thirty mesiobuccal roots from human lower first molars were divided into three groups of ten: Group 1 - ProTaper Universal™ Rotary System; Group 2 - Twisted File™ Rotary System; and Group 3 - Revo-S® Rotary System. All teeth were scanned using computed tomography to determine the condition of the root canal before and after instrumentation (4mm, 3mm and 2mm from the root apex). Images were made using ICAT VISION software for both instrumented and non-instrumented canals. Results The results were analyzed statistically using the Kolmogorov-Smirnov normality test for quantitative variables. Comparisons were made with two groups (Mann-Whitney - abnormal) and with more than two groups (Kruskal Wallis - abnormal). The level of significance was set at pProTaper Universal” and “Twisted File” systems. For the Twisted File system, a statistically significant difference was recorded between the measurements of 4mm and 3 mm. Conclusion None of the assessed instruments was completely effective in terms of the biomechanical preparation of root canals since all created deviation from the original anatomy of the canal. PMID:27847398

  20. Modification of antioxidant systems in cell walls of maize roots by different nitrogen sources

    Directory of Open Access Journals (Sweden)

    Vesna Hadži-Tašković Šukalović

    2016-12-01

    Full Text Available Antioxidant systems of maize root cell walls grown on different nitrogen sources were evaluated. Plants were grown on a medium containing only NO3- or the mixture of NO3-+NH4+, in a 2:1 ratio. Eleven-day old plants, two days after the initiation of lateral roots, were used for the experiments. Cell walls were isolated from lateral roots and primary root segments, 2-7 cm from tip to base, representing zones of intense or decreased growth rates, respectively. Protein content and the activity of enzymes peroxidase, malate dehydrogenase and ascorbate oxidase ionically or covalently bound to the walls, as well as cell wall phenolic content and antioxidant capacity, were determined. Cell walls of plants grown on mixed N possess more developed enzymatic antioxidant systems and lower non-enzymatic antioxidant defenses than cell walls grown on NO3-. Irrespective of N treatment, the activities of all studied enzymes and protein content were higher in cell walls of lateral compared to primary roots. Phenolic content of cell walls isolated from lateral roots was higher in NO3--grown than in mixed N grown plants. No significant differences could be observed in the isozyme patterns of cell wall peroxidases isolated from plants grown on different nutrient solution. Our results indicate that different N treatments modify the antioxidant systems of root cell walls. Treatment with NO3- resulted in an increase of constitutive phenolic content, while the combination of NO3-+NH4+ elevated the redox enzyme activities in root cell walls.

  1. Thermodynamics of Organic Compound Alteration in Hydrothermal Systems

    Science.gov (United States)

    Shock, E. L.

    2005-12-01

    Organic compounds enter hydrothermal systems through infiltrating surface waters, zones of microbial productivity in the subsurface, extracts of organic matter in surrounding host rocks, and abiotic synthesis. Owing to variations in pH, oxidation state, composition, temperature, and pressure throughout the changing pathways of fluid migration over the duration of the system, organic compounds from all of these sources are introduced to conditions where their relative stabilities and reactivities can be dramatically transformed. If those transformations were predictable, then the extent to which organic alteration reactions have occurred could be used to reveal flowpaths and histories of hydrothermal systems. Speciation and mass transfer calculations permit some insight into the underlying thermodynamic driving forces that result in organic compound alteration. As an example, the speciation of many geochemist's canonical organic matter: CH2O depends strongly on oxidation state, temperature, and total concentration of dissolved organic matter. Calculations show that at oxidation states buffered by iron-bearing mineral assemblages, organic acids dominate the speciation of CH2O throughout hydrothermal systems, with acetic acid (itself equivalent to 2 CH2O by bulk composition) and propanoic acid generally the most abundant compounds. However, at more reduced conditions, which may prevail in organic-rich iron-poor sediments, the drive is to form ketones and especially alcohols at the expense of organic acids. The distribution of organic carbon among the various members of these compound classes is strongly dependent on the total concentration of dissolved organic matter. As an example, at a bulk concentration equivalent to average dissolved organic matter in seawater (45μm), the dominant alcohols at 100°C are small compounds like ethanol and 1-propanol. In contrast, at a higher bulk concentration of 500μm, there is a drive to shift large percentages of dissolved

  2. Acute systemic rapamycin induces neurobehavioral alterations in rats.

    Science.gov (United States)

    Hadamitzky, Martin; Herring, Arne; Keyvani, Kathy; Doenlen, Raphael; Krügel, Ute; Bösche, Katharina; Orlowski, Kathrin; Engler, Harald; Schedlowski, Manfred

    2014-10-15

    Rapamycin is a drug with antiproliferative and immunosuppressive properties, widely used for prevention of acute graft rejection and cancer therapy. It specifically inhibits the activity of the mammalian target of rapamycin (mTOR), a protein kinase known to play an important role in cell growth, proliferation and antibody production. Clinical observations show that patients undergoing therapy with immunosuppressive drugs frequently suffer from affective disorders such as anxiety or depression. However, whether these symptoms are attributed to the action of the distinct compounds remains rather elusive. The present study investigated in rats neurobehavioral consequences of acute rapamycin treatment. Systemic administration of a single low dose rapamycin (3mg/kg) led to enhanced neuronal activity in the amygdala analyzed by intracerebral electroencephalography and FOS protein expression 90min after drug injection. Moreover, behavioral investigations revealed a rapamycin-induced increase in anxiety-related behaviors in the elevated plus-maze and in the open-field. The behavioral alterations correlated to enhanced amygdaloid expression of KLK8 and FKBP51, proteins that have been implicated in the development of anxiety and depression. Together, these results demonstrate that acute blockade of mTOR signaling by acute rapamycin administration not only causes changes in neuronal activity, but also leads to elevated protein expression in protein kinase pathways others than mTOR, contributing to the development of anxiety-like behavior. Given the pivotal role of the amygdala in mood regulation, associative learning, and modulation of cognitive functions, our findings raise the question whether therapy with rapamycin may induce alterations in patients neuropsychological functioning.

  3. [Effects of arbuscular mycorrhizal fungi on root system morphology and sucrose and glucose contents of Poncirus trifoliata].

    Science.gov (United States)

    Zou, Ying-Ning; Wu, Qiang-Sheng; Li, Yan; Huang, Yong-Ming

    2014-04-01

    The effects of inoculation with Glomus mosseae, G. versiforme, and their mixture on plant growth, root system morphology, and sucrose and glucose contents of trifoliate orange (Poncirus trifoliata L.) were studied by pot culture. The results showed that all the inoculated treatments significantly increased the plant height, stem diameter, leaf number, and shoot and root biomass. In addition, the mycorrhizal treatments significantly increased the number of 1st, 2nd, and 3rd lateral roots. Inoculation with arbuscular mycorrhizal fungi significantly increased the root projected area, surface area, volume, and total root length (mainly 0-1 cm root length), but decreased the root average diameter. Meanwhile, G. versiforme showed the best effects. Mycorrhizal inoculation significantly increased the leaf sucrose and root glucose contents, but decreased the leaf glucose and root sucrose contents. Owing to the 'mycorrhizal carbon pool' in roots, inoculation with arbuscular mycorrhizal fungi resulted in high glucose content and low sucrose content of roots, which would facilitate the root growth and development, thereby the establishment of better root system morphology of host plants.

  4. A drought resistance-promoting microbiome is selected by root system under desert farming.

    Directory of Open Access Journals (Sweden)

    Ramona Marasco

    Full Text Available BACKGROUND: Traditional agro-systems in arid areas are a bulwark for preserving soil stability and fertility, in the sight of "reverse desertification". Nevertheless, the impact of desert farming practices on the diversity and abundance of the plant associated microbiome is poorly characterized, including its functional role in supporting plant development under drought stress. METHODOLOGY/PRINCIPAL FINDINGS: We assessed the structure of the microbiome associated to the drought-sensitive pepper plant (Capsicum annuum L. cultivated in a traditional Egyptian farm, focusing on microbe contribution to a crucial ecosystem service, i.e. plant growth under water deficit. The root system was dissected by sampling root/soil with a different degree of association to the plant: the endosphere, the rhizosphere and the root surrounding soil that were compared to the uncultivated soil. Bacterial community structure and diversity, determined by using Denaturing Gradient Gel Electrophoresis, differed according to the microhabitat, indicating a selective pressure determined by the plant activity. Similarly, culturable bacteria genera showed different distribution in the three root system fractions. Bacillus spp. (68% of the isolates were mainly recovered from the endosphere, while rhizosphere and the root surrounding soil fractions were dominated by Klebsiella spp. (61% and 44% respectively. Most of the isolates (95% presented in vitro multiple plant growth promoting (PGP activities and stress resistance capabilities, but their distribution was different among the root system fractions analyzed, with enhanced abilities for Bacillus and the rhizobacteria strains. We show that the C. annuum rhizosphere under desert farming enriched populations of PGP bacteria capable of enhancing plant photosynthetic activity and biomass synthesis (up to 40% under drought stress. CONCLUSIONS/SIGNIFICANCE: Crop cultivation provides critical ecosystem services in arid lands with the

  5. crinkle, a novel symbiotic mutant that affects the infection thread growth and alters the root hair, trichome, and seed development in Lotus japonicus.

    Science.gov (United States)

    Tansengco, Myra L; Hayashi, Makoto; Kawaguchi, Masayoshi; Imaizumi-Anraku, Haruko; Murooka, Yoshikatsu

    2003-03-01

    To elucidate the mechanisms involved in Rhizobium-legume symbiosis, we examined a novel symbiotic mutant, crinkle (Ljsym79), from the model legume Lotus japonicus. On nitrogen-starved medium, crinkle mutants inoculated with the symbiont bacterium Mesorhizobium loti MAFF 303099 showed severe nitrogen deficiency symptoms. This mutant was characterized by the production of many bumps and small, white, uninfected nodule-like structures. Few nodules were pale-pink and irregularly shaped with nitrogen-fixing bacteroids and expressing leghemoglobin mRNA. Morphological analysis of infected roots showed that nodulation in crinkle mutants is blocked at the stage of the infection process. Confocal microscopy and histological examination of crinkle nodules revealed that infection threads were arrested upon penetrating the epidermal cells. Starch accumulation in uninfected cells and undeveloped vascular bundles were also noted in crinkle nodules. Results suggest that the Crinkle gene controls the infection process that is crucial during the early stage of nodule organogenesis. Aside from the symbiotic phenotypes, crinkle mutants also developed morphological alterations, such as crinkly or wavy trichomes, short seedpods with aborted embryos, and swollen root hairs. crinkle is therefore required for symbiotic nodule development and for other aspects of plant development.

  6. Root inoculation with Pseudomonas putida KT2440 induces transcriptional and metabolic changes and systemic resistance in maize plants

    OpenAIRE

    Chantal ePlanchamp; Gaetan eGlauser; Brigitte eMauch-Mani

    2015-01-01

    Pseudomonas putida KT2440 (KT2440) rhizobacteria colonize a wide range of plants. They have been extensively studied for their capacity to adhere to maize seeds, to tolerate toxic secondary metabolites produced by maize roots and to be attracted by maize roots. However, the response of maize plants to KT2440 colonization has not been investigated yet. Maize roots were inoculated with KT2440 and the local (roots) and systemic (leaves) early plant responses were investigated. The colonization b...

  7. Altered signaling in systemic juvenile idiopathic arthritis monocytes.

    Science.gov (United States)

    Macaubas, Claudia; Wong, Elizabeth; Zhang, Yujuan; Nguyen, Khoa D; Lee, Justin; Milojevic, Diana; Shenoi, Susan; Stevens, Anne M; Ilowite, Norman; Saper, Vivian; Lee, Tzielan; Mellins, Elizabeth D

    2016-02-01

    Systemic juvenile idiopathic arthritis (sJIA) is characterized by systemic inflammation and arthritis. Monocytes are implicated in sJIA pathogenesis, but their role in disease is unclear. The response of sJIA monocytes to IFN may be dysregulated. We examined intracellular signaling in response to IFN type I (IFNα) and type II (IFNγ) in monocytes during sJIA activity and quiescence, in 2 patient groups. Independent of disease activity, monocytes from Group 1 (collected between 2002 and 2009) showed defective STAT1 phosphorylation downstream of IFNs, and expressed higher transcript levels of SOCS1, an inhibitor of IFN signaling. In the Group 2 (collected between 2011 and 2014), monocytes of patients with recent disease onset were IFNγ hyporesponsive, but in treated, quiescent subjects, monocytes were hyperresponsive to IFNγ. Recent changes in medication in sJIA may alter the IFN hyporesponsiveness. Impaired IFN/pSTAT1 signaling is consistent with skewing of sJIA monocytes away from an M1 phenotype and may contribute to disease pathology.

  8. Maternal bisphenol A alters fetal endocrine system: Thyroid adipokine dysfunction.

    Science.gov (United States)

    Ahmed, R G

    2016-09-01

    Because bisphenol A (BPA) has been detected in animals, the aim of this study was to investigate the possible effects of maternal BPA exposure on the fetal endocrine system (thyroid-adipokine axis). BPA (20 or 40 μg/kg body weight) was orally administered to pregnant rats from gestation day (GD) 1-20. In both treated groups, the dams and their fetuses had lower serum thyroxine (T4) and triiodothyronine (T3) levels, and higher thyrotropin (TSH) level than control dams and fetuses at GD 20. Some histopathological changes in fetal thyroid glands were observed in both maternal BPA groups at embryonic day (ED) 20, including fibroblast proliferation, hyperplasia, luminal obliteration, oedema, and degeneration. These disorders resulted in the suppression of fetal serum growth hormone (GH), insulin growth factor-1 (IGF1) and adiponectin (ADP) levels, and the elevation of fetal serum leptin, insulin and tumor necrosis factor-alpha (TNFα) levels in both treated groups with respect to control. The depraved effects of both treated groups were associated with reduced maternal and fetal body weight compared to the control group. These alterations were dose dependent. Thus, BPA might penetrate the placental barrier and perturb the fetal thyroid adipokine axis to influence fat metabolism and the endocrine system.

  9. Computational Hemodynamic Simulation of Human Circulatory System under Altered Gravity

    Science.gov (United States)

    Kim. Chang Sung; Kiris, Cetin; Kwak, Dochan

    2003-01-01

    A computational hemodynamics approach is presented to simulate the blood flow through the human circulatory system under altered gravity conditions. Numerical techniques relevant to hemodynamics issues are introduced to non-Newtonian modeling for flow characteristics governed by red blood cells, distensible wall motion due to the heart pulse, and capillary bed modeling for outflow boundary conditions. Gravitational body force terms are added to the Navier-Stokes equations to study the effects of gravity on internal flows. Six-type gravity benchmark problems are originally presented to provide the fundamental understanding of gravitational effects on the human circulatory system. For code validation, computed results are compared with steady and unsteady experimental data for non-Newtonian flows in a carotid bifurcation model and a curved circular tube, respectively. This computational approach is then applied to the blood circulation in the human brain as a target problem. A three-dimensional, idealized Circle of Willis configuration is developed with minor arteries truncated based on anatomical data. Demonstrated is not only the mechanism of the collateral circulation but also the effects of gravity on the distensible wall motion and resultant flow patterns.

  10. Toward a Low-Cost System for High-Throughput Image-Based Phenotyping of Root System Architecture

    Science.gov (United States)

    Davis, T. W.; Schneider, D. J.; Cheng, H.; Shaw, N.; Kochian, L. V.; Shaff, J. E.

    2015-12-01

    Root system architecture is being studied more closely for improved nutrient acquisition, stress tolerance and carbon sequestration by relating the genetic material that corresponds to preferential physical features. This information can help direct plant breeders in addressing the growing concerns regarding the global demand on crops and fossil fuels. To help support this incentive comes a need to make high-throughput image-based phenotyping of plant roots, at the individual plant scale, simpler and more affordable. Our goal is to create an affordable and portable product for simple image collection, processing and management that will extend root phenotyping to institutions with limited funding (e.g., in developing countries). Thus, a new integrated system has been developed using the Raspberry Pi single-board computer. Similar to other 3D-based imaging platforms, the system utilizes a stationary camera to photograph a rotating crop root system (e.g., rice, maize or sorghum) that is suspended either in a gel or on a mesh (for hydroponics). In contrast, the new design takes advantage of powerful open-source hardware and software to reduce the system costs, simplify the imaging process, and manage the large datasets produced by the high-resolution photographs. A newly designed graphical user interface (GUI) unifies the system controls (e.g., adjusting camera and motor settings and orchestrating the motor motion with image capture), making it easier to accommodate a variety of experiments. During each imaging session, integral metadata necessary for reproducing experiment results are collected (e.g., plant type and age, growing conditions and treatments, camera settings) using hierarchical data format files. These metadata are searchable within the GUI and can be selected and extracted for further analysis. The GUI also supports an image previewer that performs limited image processing (e.g., thresholding and cropping). Root skeletonization, 3D reconstruction and

  11. Root cause analysis of pump valve failures of three membrane pump systems

    NARCIS (Netherlands)

    Buijs, L.J.; Eijk, A.; Hooft, L. van

    2014-01-01

    This paper will present the root cause analysis and the solution of fatigue failures of the pump valves of three membrane pump systems installed on a chemical plant of Momentive in Pernis, the Netherlands. The membrane pumps were installed approximately 30 years ago. Each system has encountered fati

  12. Deciphering Phosphate Deficiency-Mediated Temporal Effects on Different Root Traits in Rice Grown in a Modified Hydroponic System.

    Science.gov (United States)

    Negi, Manisha; Sanagala, Raghavendrarao; Rai, Vandna; Jain, Ajay

    2016-01-01

    Phosphate (Pi), an essential macronutrient for growth and development of plant, is often limiting in soils. Plants have evolved an array of adaptive strategies including modulation of root system architecture (RSA) for optimal acquisition of Pi. In rice, a major staple food, RSA is complex and comprises embryonically developed primary and seminal roots and post-embryonically developed adventitious and lateral roots. Earlier studies have used variant hydroponic systems for documenting the effects of Pi deficiency largely on primary root growth. Here, we report the temporal effects of Pi deficiency in rice genotype MI48 on 15 ontogenetically distinct root traits by using easy-to-assemble and economically viable modified hydroponic system. Effects of Pi deprivation became evident after 4 days- and 7 days-treatments on two and eight different root traits, respectively. The effects of Pi deprivation for 7 days were also evident on different root traits of rice genotype Nagina 22 (N22). There were genotypic differences in the responses of primary root growth along with lateral roots on it and the number and length of seminal and adventitious roots. Notably though, there were attenuating effects of Pi deficiency on the lateral roots on seminal and adventitious roots and total root length in both these genotypes. The study thus revealed both differential and comparable effects of Pi deficiency on different root traits in these genotypes. Pi deficiency also triggered reduction in Pi content and induction of several Pi starvation-responsive (PSR) genes in roots of MI48. Together, the analyses validated the fidelity of this modified hydroponic system for documenting Pi deficiency-mediated effects not only on different traits of RSA but also on physiological and molecular responses.

  13. Deciphering Phosphate Deficiency-Mediated Temporal Effects on Different Root Traits in Rice Grown in a Modified Hydroponic System

    Science.gov (United States)

    Negi, Manisha; Sanagala, Raghavendrarao; Rai, Vandna; Jain, Ajay

    2016-01-01

    Phosphate (Pi), an essential macronutrient for growth and development of plant, is often limiting in soils. Plants have evolved an array of adaptive strategies including modulation of root system architecture (RSA) for optimal acquisition of Pi. In rice, a major staple food, RSA is complex and comprises embryonically developed primary and seminal roots and post-embryonically developed adventitious and lateral roots. Earlier studies have used variant hydroponic systems for documenting the effects of Pi deficiency largely on primary root growth. Here, we report the temporal effects of Pi deficiency in rice genotype MI48 on 15 ontogenetically distinct root traits by using easy-to-assemble and economically viable modified hydroponic system. Effects of Pi deprivation became evident after 4 days- and 7 days-treatments on two and eight different root traits, respectively. The effects of Pi deprivation for 7 days were also evident on different root traits of rice genotype Nagina 22 (N22). There were genotypic differences in the responses of primary root growth along with lateral roots on it and the number and length of seminal and adventitious roots. Notably though, there were attenuating effects of Pi deficiency on the lateral roots on seminal and adventitious roots and total root length in both these genotypes. The study thus revealed both differential and comparable effects of Pi deficiency on different root traits in these genotypes. Pi deficiency also triggered reduction in Pi content and induction of several Pi starvation-responsive (PSR) genes in roots of MI48. Together, the analyses validated the fidelity of this modified hydroponic system for documenting Pi deficiency-mediated effects not only on different traits of RSA but also on physiological and molecular responses. PMID:27200025

  14. Altered B cell receptor signaling in human systemic lupus erythematosus

    Science.gov (United States)

    Jenks, Scott A.; Sanz, Iñaki

    2009-01-01

    Regulation of B cell receptor signaling is essential for the development of specific immunity while retaining tolerance to self. Systemic lupus erythematosus (SLE) is characterized by a loss of B cell tolerance and the production of anti-self antibodies. Accompanying this break down in tolerance are alterations in B cell receptor signal transduction including elevated induced calcium responses and increased protein phosphorylation. Specific pathways that negatively regulate B cell signaling have been shown to be impaired in some SLE patients. These patients have reduced levels of the kinase Lyn in lipid raft microdomains and this reduction is inversely correlated with increased CD45 in lipid rafts. Function and expression of the inhibitory immunoglobulin receptor FcγRIIB is also reduced in Lupus IgM- CD27+ memory cells. Because the relative contribution of different memory and transitional B cell subsets can be abnormal in SLE patients, we believe studies targeted to well defined B cell subsets will be necessary to further our understanding of signaling abnormalities in SLE. Intracellular flow cytometric analysis of signaling is a useful approach to accomplish this goal. PMID:18723129

  15. Detection of 3D tree root systems using high resolution ground penetration radar

    Science.gov (United States)

    Altdorff, D.; Honds, M.; Botschek, J.; Van Der Kruk, J.

    2014-12-01

    Knowledge of root systems and its distribution are important for biomass estimation as well as for the prevention of subsurface distribution network damages. Ground penetration radar (GPR) is a promising technique that enables a non-invasive imaging of tree roots. Due to the polarisation-dependent reflection coefficients and complicated three-dimensional root structure, accurate measurements with perpendicularly polarized antennas are needed. In this study, we show GPR data from two planes and one chestnut at two locations with different soil conditions. Perpendicular 10 x 10 cm grid measurements were made with a shielded 250 MHz antenna in combination with a high precision self-tracking laser theodolite that provides geo-referenced traces with a spatial resolution of ~ 2 cm. After selecting potential root hyperbolas within the perpendicular GPR profiles, the corresponding three-dimensional coordinates were extracted and visualized in planar view to reveal any linear structure that indicates a possible tree root. The coordinates of the selected linear structures were projected back to the surface by means of the laser-theodolite to indicate the locations for groundtruthing. Additionally, we interpolated the measured data into a 3D cube where time slices confirmed the locations of linear reflection events. We validated the indicated predictions by excavation of the soil with a suction dredge. Subsequent georeferencing of the true root distribution and comparison with the selected linear events showed that the approach was able to identify the precise position of roots with a diameter between 3 and 10 cm and a depth of up to 70 cm. However, not all linear events were roots; also mouse channels were found in these depths, since they also generate GPR hyperbolas aligned in linear structures. Roots at a second location at depths of 1 to 1.20 m did not generate identifiable hyperboles, which was probably due to an increased electrical conductivity below 86 cm depth. The

  16. 76 FR 4451 - Privacy Act of 1974; Report of Modified or Altered System of Records

    Science.gov (United States)

    2011-01-25

    ... Altered System of Records AGENCY: Executive Systems and Fellowship Staff, Atlanta Human Resources Center... Health and Human Services (HHS) may disclose information from this system of records to the Department of...). ACTION: Notification of Proposed Altered System of Records. SUMMARY: The Department of Health and...

  17. Ideotype root architecture for efficient nitrogen acquisition by maize in intensive cropping systems

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    The use of nitrogen(N) fertilizers has contributed to the production of a food supply sufficient for both animals and humans despite some negative environmental impact.Sustaining food production by increasing N use efficiency in intensive cropping systems has become a major concern for scientists,environmental groups,and agricultural policymakers worldwide.In high-yielding maize systems the major method of N loss is nitrate leaching.In this review paper,the characteristic of nitrate movement in the soil,N uptake by maize as well as the regulation of root growth by soil N availability are discussed.We suggest that an ideotype root architecture for efficient N acquisition in maize should include(i) deeper roots with high activity that are able to uptake nitrate before it moves downward into deep soil;(ii) vigorous lateral root growth under high N input conditions so as to increase spatial N availability in the soil;and(iii) strong response of lateral root growth to localized nitrogen supply so as to utilize unevenly distributed nitrate especially under limited N conditions.

  18. Fruit yield and root system distribution of 'Tommy Atkins' mango under different irrigation regimes

    Directory of Open Access Journals (Sweden)

    Marcelo R. dos Santos

    2014-04-01

    Full Text Available This study aimed to evaluate the fruit yield and the distribution of 'Tommy Atkins' mango root system under different irrigation regimes in the semiarid region of Bahia. The experimental design was completely randomized with five treatments and three replicates: 1 - Irrigation supplying 100% of ETc in phases I, II and III; 2 - Regulated deficit irrigation (RDI supplying 50% of ETc in phase I (beginning of flowering to early fruit growth; 3 - RDI supplying 50% ETc in phase II (start of expansion until the beginning of physiological maturity; 4 - RDI supplying 50% ETc in phase III (physiological mature fruits; 5 - No irrigation during all three phases. The regulated deficit irrigation supplying 50% of the ETc during phase I and II provided larger root length density of 'Tommy Atkins' mango. Regardless of management strategy, the roots were developed in all evaluated soil volume and the highest density is concentrated from 0.50 to 1.50 m distance from the trunk and in 0.20 to 0.90 m depth in the soil, that suggests this region to be the best place for fertilizer application as well for soil water sensor placement. The application of RDI during fruit set does not influence either root distribution or production. Root system and crop production is significantly reduced under no irrigation conditions.

  19. Modeling water uptake by a root system growing in a fixed soil volume

    CERN Document Server

    Albrieu, J L Blengino; Tarzia, D A

    2015-01-01

    The water uptake by roots of plants is examined for an ideal situation, with an approximation that resembles plants growing in pots, meaning that the total soil volume is fixed. We propose a coupled water uptake-root growth model. A one-dimensional model for water flux and water uptake by a root system growing uniformly distributed in the soil is presented, and the Van Genuchten model for the transport of water in soil is used. The governing equations are represented by a moving boundary model for which the root length, as a function of time, is prescribed. The solution of the model is obtained by front-fixing and finite element methods. Model predictions for water uptake by a same plant growing in loam, silt and clay soils are obtained and compared. A sensitivity analysis to determine relative effects on water uptake when system parameters are changed is also presented and shows that the model and numerical method proposed are more sensitive to the root growth rate than to the rest of the parameters. This se...

  20. Microgravity effects on water supply and substrate properties in porous matrix root support systems

    Science.gov (United States)

    Bingham, G. E.; Jones, S. B.; Or, D.; Podolski, I. G.; Levinskikh, M. A.; Sytchov, V. N.; Ivanova, T.; Kostov, P.; Sapunova, S.; Dandolov, I.; Bubenheim, D. B.; Jahns, G.; Campbell, W. F. (Principal Investigator)

    2000-01-01

    The control of water content and water movement in granular substrate-based plant root systems in microgravity is a complex problem. Improper water and oxygen delivery to plant roots has delayed studies of the effects of microgravity on plant development and the use of plants in physical and mental life support systems. Our international effort (USA, Russia and Bulgaria) has upgraded the plant growth facilities on the Mir Orbital Station (OS) and used them to study the full life cycle of plants. The Bulgarian-Russian-developed Svet Space Greenhouse (SG) system was upgraded on the Mir OS in 1996. The US developed Gas Exchange Measurement System (GEMS) greatly extends the range of environmental parameters monitored. The Svet-GEMS complex was used to grow a fully developed wheat crop during 1996. The growth rate and development of these plants compared well with earth grown plants indicating that the root zone water and oxygen stresses that have limited plant development in previous long-duration experiments have been overcome. However, management of the root environment during this experiment involved several significant changes in control settings as the relationship between the water delivery system, water status sensors, and the substrate changed during the growth cycles. c 2001 Published by Elsevier Science Ltd. All rights reserved.

  1. Influence of the rotary and/or oscillatory reciprocating systems in the morphological changes of narrow and curved molar root canals anatomy

    Directory of Open Access Journals (Sweden)

    Joedy Maria Costa Santa Rosa

    Full Text Available OBJECTIVE: This study evaluated four mechanized Endodontic systems, ProTaper Universal, K3 Endo, Twisted file (rotary and the oscillatory reciprocating system Endo - Eze TiLOS, in order to verify and measure alterations in original anatomy with deviations at cervical, medium and apical root canal thirds. MATERIAL AND METHOD: It was used MB root canals of 60 extract human lower molars, to produce a line of severe angles, according to the classification of Schneider. Samples were included in Ester vinyl resin, mounted in the Teflon Furnace, transversally sectioned at the cervical, middle and apical thirds, which were subsequently photographed using a digital camera Cyber Shot DSC-TX10,attached to an operating microscope 3101XY DFVasconcelos with 40× magnification in order to measure the anatomical transversal area of the root canal, using the software AutoCAD 2008, comparing pre and post-instrumentation. All samples assembled in the Furnace also were submitted to x-ray in a standardized way to enable the comparison of the angle of Schneider pre-and post-instrumentation. Once collected the data, they were compared statistically using the program BioEstat 5.0. RESULT: The analysis of the results showed that in the cervical third, rotary systems were more effective than Endo-Eze TiLOS System with statistically significant differences (p ≤ 0,05. Apical and middle third changes in anatomy were similar, but apically, the ProTaper system caused more deviations when comparing the angle of Schneider,and areas before and after instrumentation(p ≤ 0,05. CONCLUSION: It was concluded that all the systems caused alteration in the original anatomy of the root canal when parameters as angle of Schneider and areas before and after preparation were used.

  2. Felder's elliptic quantum group and elliptic hypergeometric series on the root system A_n

    CERN Document Server

    Rosengren, Hjalmar

    2010-01-01

    We introduce a generalization of elliptic 6j-symbols, which can be interpreted as matrix elements for intertwiners between corepresentations of Felder's elliptic quantum group. For special parameter values, they can be expressed in terms of multivariable elliptic hypergeometric series related to the root system A_n. As a consequence, we obtain new biorthogonality relations for such series.

  3. The Genealogy Project: Tracing Academic Roots in the History and Systems Course.

    Science.gov (United States)

    Goodwin, C. James; Dingus, Michelle; Petterson, Stephanie

    2002-01-01

    Describes an assignment in a history and systems of psychology course where students traced the genealogy of psychologists in terms of their academic roots. Explains that the students learned about bibliographic resources during the project. Discusses assignment outcomes as discovered through a student survey. (CMK)

  4. Centering and transportation: in vitro evaluation of continuous and reciprocating systems in curved root canals

    Directory of Open Access Journals (Sweden)

    Beatriz Vilas Navós

    2016-01-01

    Conclusions: We concluded that there were no differences in transportation between the evaluated systems for the preparation of curved root canals with an apical instrumentation diameter of #25. For centering ability, in the apical third, ProTaper® presented worst behavior when compared to Reciproc®.

  5. Prevention of root diseases in closed soilless growing systems by microbial optimisation and slow sand filtration

    NARCIS (Netherlands)

    Os, van E.A.; Postma, J.

    2000-01-01

    Closed hydroponic systems are good alternatives for soil grown crops using methyl bromide in protected cultivation. Root-infecting pathogens may be dispersed over the nursery by the circulating nutrient solution, which was reason to disinfect the nutrient solution. The natural microflora in the nutr

  6. Reflection subgroups and sub-root systems of the imprimitive complex reflection groups

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    Based on a graph-theoretic analysis,we determine all the irreducible reflection subgroups of the imprimitive complex reflection groups G(m,p,n),and describe the irreducible subsystems of all possible types in the root system R(m,p,n) of G(m,p,n).

  7. Can Crops with Greater Rooting Systems Improve Nitrogen Retention and Mitigate Emissions of Nitrous Oxide?

    Science.gov (United States)

    Decock, Charlotte; Lee, Juhwan; Barthel, Matti; Mikita, Chris; Wilde, Benjamin; Verhoeven, Elizabeth; Hund, Andreas; Abiven, Samuel; Friedli, Cordula; Conen, Franz; Mohn, Joachim; Wolf, Benjamin; Six, Johan

    2016-04-01

    It has been suggested that crops with deeper root systems could improve agricultural sustainability, because scavenging of nitrogen (N) in the subsoil would increase overall N retention and use efficiency in the system. However, the effect of plant root depth and root architecture on N-leaching and emissions of the potent greenhouse N2O remains largely unknown. We aimed to assess the effect of plant rooting depth on N-cycling and N2O production and reduction within the plant-soil system and throughout the soil profile. We hypothesized that greater root depth and root biomass will (1) increase N use efficiency and decrease N losses in the form of N leaching and N2O emissions; (2) increase N retention by shifting the fate of NH4+ from more nitrification toward more plant uptake and microbial immobilization; and (3) increase the depth of maximum N2O production and decrease the ratio of N2O:(N2O+N2) in denitrification end-products. To test these hypotheses, 4 winter wheat cultivars were grown in lysimeters (1.5 m tall, 0.5 m diameter, 3 replications per cultivar) under greenhouse conditions. Each lysimeter was equipped with an automated flux chamber for the determination of N2O surface fluxes. At 7.5, 30, 60, 90 and 120 cm depth, sampling ports were installed for the determination of soil moisture contents, as well as the collection of soil pore air and soil pore water samples. We selected two older and two newer varieties from the Swiss winter wheat breeding program, spanning a 100-year breeding history. The selection was based on previous experiments indicating that the older varieties have deeper rooting systems than the newer varieties under well watered conditions. N2O fluxes were determined twice per day on a quantum cascade laser absorption spectrometer interfaced with the automated flux chambers. Once per week, we determined concentrations of mineral N in pore water and of CO2 and N2O in the pore air. For mineral N and N2O, also natural abundance isotope deltas

  8. Optimizing root system architecture in biofuel crops for sustainable energy production and soil carbon sequestration.

    Science.gov (United States)

    To, Jennifer Pc; Zhu, Jinming; Benfey, Philip N; Elich, Tedd

    2010-09-08

    Root system architecture (RSA) describes the dynamic spatial configuration of different types and ages of roots in a plant, which allows adaptation to different environments. Modifications in RSA enhance agronomic traits in crops and have been implicated in soil organic carbon content. Together, these fundamental properties of RSA contribute to the net carbon balance and overall sustainability of biofuels. In this article, we will review recent data supporting carbon sequestration by biofuel crops, highlight current progress in studying RSA, and discuss future opportunities for optimizing RSA for biofuel production and soil carbon sequestration.

  9. Healthiness and fungus composition of barley roots under organic, integrated and conventional farming systems

    Directory of Open Access Journals (Sweden)

    Anna Baturo

    2013-12-01

    Full Text Available The researched material was healthiness of roots and fungus composition of spring barley cultivated under organic, integrated and conventional farming systems. The studies were carried out in 1998-2001 on experimental fields in Osiny near Puławy, south-eastern Poland. In the emergence stage the roots health status was the lowest in organic system however in the end of vegetation season, in dough maturity stage the most disease symptoms were stated in conventional system. The mycological analyses revealed the occurrence of two important pathogens: Bipolaris sorokiniana and Fusarium spp. Despite of root healthiness macroscopic analyses showed their lower health status in organic system only in emergence stage and the most quantity of plants with disease symptoms in dough maturity stage were observed in conventional system, but pathogens like Bipolaris sorokiniana and Fusarium spp. were mostly isolated in organic system in both phases. It can suggest that disease symptoms in conventional system can be caused by different than fungus factors. The lowest percent of mentioned pathogens was stated in integrated system. It is worth to notice that organic conditions could be favourable to Gliocladium roseum. Because of growing interest in ecology, giving up of using pesticides and more and more popular biological disease control, these fungi of Gliocladium genus be used in this system due to their antagonistic properties.

  10. Soil CO2 Efflux and Root Productivity in a Switchgrass and Loblolly Pine Intercropping System

    Directory of Open Access Journals (Sweden)

    Paliza Shrestha

    2016-09-01

    Full Text Available Switchgrass intercropped with loblolly pine plantations can provide valuable feedstock for bioenergy production while providing ancillary benefits like controlling competing vegetation and enhancing soil C. Better understanding of the impact of intercropping on pine and switchgrass productivity is required for evaluating the long-term sustainability of this agroforestry system, along with the impacts on soil C dynamics (soil CO2 efflux; RS. RS is the result of root respiration (RA and heterotrophic respiration (RH, which are used to estimate net C ecosystem exchange. We measured RS in intercropped and monoculture stands of loblolly pine (Pinus taeda L. and switchgrass (Panicum virgatum L.. The root exclusion core technique was used to estimate RA and RH. The results showed pure switchgrass had significantly higher RS rates (July, August and September, root biomass and length relative to intercropped switchgrass, while there were no significant changes in RS and roots between intercropped and monoculture loblolly pine stands. A significant decrease in switchgrass root productivity in the intercropped stands versus monoculture stands could account for differences in the observed RS. The proportions of RS attributed to RA in the intercropped stand were 31% and 22% in the summer and fall respectively, indicating that the majority of the RS was heterotrophic-driven. Ancillary benefits provided by planting switchgrass between unutilized pine rows can be considered unless the goal is to increase switchgrass production.

  11. Microbiome in the Apical Root Canal System of Teeth with Post-Treatment Apical Periodontitis

    Science.gov (United States)

    Siqueira, José F.; Antunes, Henrique S.; Rôças, Isabela N.; Rachid, Caio T. C. C.

    2016-01-01

    Introduction Bacteria present in the apical root canal system are directly involved with the pathogenesis of post-treatment apical periodontitis. This study used a next-generation sequencing approach to identify the bacterial taxa occurring in cryopulverized apical root samples from root canal-treated teeth with post-treatment disease. Methods Apical root specimens obtained during periradicular surgery of ten adequately treated teeth with persistent apical periodontitis were cryogenically ground. DNA was extracted from the powder and the microbiome was characterized on the basis of the V4 hypervariable region of the 16S rRNA gene by using paired-end sequencing on Illumina MiSeq device. Results All samples were positive for the presence of bacterial DNA. Bacterial taxa were mapped to 11 phyla and 103 genera composed by 538 distinct operational taxonomic units (OTUs) at 3% of dissimilarity. Over 85% of the sequences belonged to 4 phyla: Proteobacteria, Firmicutes, Fusobacteria and Actinobacteria. In general, these 4 phyla accounted for approximately 80% of the distinct OTUs found in the apical root samples. Proteobacteria was the most abundant phylum in 6/10 samples. Fourteen genera had representatives identified in all cases. Overall, the genera Fusobacterium and Pseudomonas were the most dominant. Enterococcus was found in 4 cases, always in relatively low abundance. Conclusions This study showed a highly complex bacterial community in the apical root canal system of adequately treated teeth with persistent apical periodontitis. This suggests that this disease is characterized by multispecies bacterial communities and has a heterogeneous etiology, because the community composition largely varied from case to case. PMID:27689802

  12. Jasmonic acid causes short- and long-term alterations to the transcriptome and the expression of defense genes in sugarbeet roots

    Science.gov (United States)

    Jasmonic acid (JA) induces native defense responses in plants and increases the resistance of postharvest sugarbeet roots to three common storage-rot causing organisms. To gain insight into the defense responses induced by JA in harvested sugarbeet roots, RNA was isolated from roots treated with wat...

  13. K+ uptake in plant roots. The systems involved, their regulation and parallels in other organisms.

    Science.gov (United States)

    Nieves-Cordones, Manuel; Alemán, Fernando; Martínez, Vicente; Rubio, Francisco

    2014-05-15

    Potassium (K(+)) is an essential macronutrient for plants. It is taken into the plant by the transport systems present in the plasma membranes of root epidermal and cortical cells. The identity of these systems and their regulation is beginning to be understood and the systems of K(+) transport in the model species Arabidopsis thaliana remain far better characterized than in any other plant species. Roots can activate different K(+) uptake systems to adapt to their environment, important to a sessile organism that needs to cope with a highly variable environment. The mechanisms of K(+) acquisition in the model species A. thaliana are the best characterized at the molecular level so far. According to the current model, non-selective channels are probably the main pathways for K(+) uptake at high concentrations (>10mM), while at intermediate concentrations (1mM), the inward rectifying channel AKT1 dominates K(+) uptake. Under lower concentrations of external K(+) (100μM), AKT1 channels, together with the high-affinity K(+) uptake system HAK5 contribute to K(+) acquisition, and at extremely low concentrations (root K(+) uptake are shared by other organisms, whilst others are specific to plants. This indicates that some crucial properties of the ancestral of K(+) transport systems have been conserved through evolution while others have diverged among different kingdoms.

  14. Effects of Local Nitrogen Supply on Water Uptake of Bean Plants in a Split Root System

    Institute of Scientific and Technical Information of China (English)

    Shiwei Guo; Qirong Shen; Holger Brueck

    2007-01-01

    To study the effects of local nitrogen supply on water and nutrient absorption, French bean (Phaseolus vulgaris L.)plants were grown in a split root system. Five treatments supplied with different nitrogen forms were compared:homogeneous nitrate (NN) and homogenous ammonium (AA) supply, spatially separated supply of nitrate and ammonium (NA), half of the root system supplied with N-free nutrient solution, the other half with either nitrate (NO) or ammonium (AO). The results showed that 10 d after onset of treatments, root dry matter (DM) in the nitratesupplied vessels treated with NA was more than two times higher than that in the ammonium-supplied vessels.Water uptake from the nitrate-supplied vessels treated with NA was 281% higher than under ammonium supply. In treatments NO and AO, the local supply of N resulted in clearly higher root DM, and water uptake from the nitratesupplied vessels was 82% higher than in the -N vessels. However, in AO plants, water uptake from the -N nutrient solution was 129% higher than from the ammonium-supplied vessels. This indicates a compensatory effect, which resulted in almost identical rates of total water uptake of treatments AA and AO, which had comparable shoot DM and leaf area. Ammonium supply reduced potassium and magnesium absorption. Water uptake was positively correlated with N, Mg and K uptake.

  15. Migration law of heavy metal cadmium in soil-root interface systems

    Institute of Scientific and Technical Information of China (English)

    Jin-Xiang YANG; Ming-Xu ZHANG; Xiao-Long LI; Liang-Min GAO; Duo-Xi YAO

    2013-01-01

    The distribution characteristics of heavy metals in soil-root systems have great significance for the research into soil pollution risk assessment and the phytoremediation effect.This paper takes ligustrum lucidum as an example,based on the characteristics of adsorption of heavy metals in soil by woody plants,lays out sampling points,and using software Sufer for the Kiging interpolation analysis,and the horizontal migration law of heavy metal cadmium in the soil-root interface system is simulated.Through multi-model statistical regression trend analysis,the horizontal migration mechanism of cadmium in different sections is discussed.The results show that:① under horizontal migration law:the migration ability of Cd is weaker near the Ligustrum lucidum root (0-30 cm); with the root extension,the migration ability of Cd gradually is strengthened,and the main range of the migration ability is 60 90 cm.In addition,its migration law follows the cubic curve mode.② under longitudinal migration law:based on the Kriging method,migration models Z(hi) of heavy metal Cd in any depth of hi are constructed and fit the correlation coefficient R2>0.95.

  16. Tree growth and management in Ugandan agroforestry systems: effects of root pruning on tree growth and crop yield.

    Science.gov (United States)

    Wajja-Musukwe, Tellie-Nelson; Wilson, Julia; Sprent, Janet I; Ong, Chin K; Deans, J Douglas; Okorio, John

    2008-02-01

    Tree root pruning is a potential tool for managing belowground competition when trees and crops are grown together in agroforestry systems. We investigated the effects of tree root pruning on shoot growth and root distribution of Alnus acuminata (H.B. & K.), Casuarina equisetifolia L., Grevillea robusta A. Cunn. ex R. Br., Maesopsis eminii Engl. and Markhamia lutea (Benth.) K. Schum. and on yield of adjacent crops in sub-humid Uganda. The trees were 3 years old at the commencement of the study, and most species were competing strongly with crops. Tree roots were pruned 41 months after planting by cutting and back-filling a trench to a depth of 0.3 m, at a distance of 0.3 m from the trees, on one side of the tree row. The trench was reopened and roots recut at 50 and 62 months after planting. We assessed the effects on tree growth and root distribution over a 3 year period, and crop yield after the third root pruning at 62 months. Overall, root pruning had only a slight effect on aboveground tree growth: height growth was unaffected and diameter growth was reduced by only 4%. A substantial amount of root regrowth was observed by 11 months after pruning. Tree species varied in the number and distribution of roots, and C. equisetifolia and M. lutea had considerably more roots per unit of trunk volume than the other species, especially in the surface soil layers. Casuarina equisetifolia and M. eminii were the tree species most competitive with crops and G. robusta and M. lutea the least competitive. Crop yield data provided strong evidence of the redistribution of root activity following root pruning, with competition increasing on the unpruned side of tree rows. Thus, one-sided root pruning will be useful in only a few circumstances.

  17. Concept for Sustained Plant Production on ISS Using VEGGIE Capillary Mat Rooting System

    Science.gov (United States)

    Stutte, Gary W.; Newsham, Gerard; Morrow, Robert M.; Wheeler, Raymond M.

    2011-01-01

    Plant growth in microgravity presents unique challenges associated with maintaining appropriate conditions for seed germination, seedling establishment, maturation and harvest. They include maintaining appropriate soil moisture content, nutrient balance, atmospheric mixing and containment. Sustained production imposes additional challenges of harvesting, replanting, and safety. The VEGGIE is a deployable (collapsible) plant growth chamber developed as part of a NASA SBIR Phase II by Orbitec, Madison, WI. The intent of VEGGIE is to provide a low-resource system to produce fresh vegetables for the crew on long duration missions. The VEGGIE uses and LED array for lighting, an expandable bellows for containment, and a capillary matting system for nutrient and water delivery. The project evaluated a number of approaches to achieve sustained production, and repeated plantings, using the capillary rooting system. A number of different root media, seed containment, and nutrient delivery systems were evaluated and effects on seed germination and growth were evaluated. A number of issues limiting sustained production, such as accumulation of nutrients, uniform water, elevated vapor pressure deficit, and media containment were identified. A concept using pre-planted rooting packs shown to effectively address a number of those issues and is a promising approach for future development as a planting system for microgravity conditions.

  18. Vertical distribution of the root system of linseed (Linum usitatissimum L. and legumes in pure and mixed sowing

    Directory of Open Access Journals (Sweden)

    Agnieszka Klimek-Kopyra

    2015-03-01

    Full Text Available Root competition for below-ground resources between edible plants may provide for long-term sustainability of agriculture systems. Intercropping can be more productive than a pure crop due to taking advantage of the morphological differences between species. In pure cropping, all biophysical interactions between plants occur through soil conditions. In intercropping, competition for water and nutrients is of major importance, but if the roots of one species occupy the zone just underneath the roots of the other crop, they can better use the resources of the root zone of the crop. The root system demonstrates a high degree of plasticity in its development in response to local heterogeneity of the soil profile and plant density. This study aimed at determining: (i the morphological characteristics of the root systems of linseed, pea and vetch depending on the method of sowing; (ii the root distribution in various soil types and at different soil profile depths (0–15 cm, 15–30 cm. Two three-year field experiments were conducted on two soil types in south Poland: soil A – Luvic Phaeozem (s1 and soil B – Eutric Cambisol (s2. These results show that linseed was more aggressive toward both legumes in mixture, but it produced lower yield compared to pure cropping. The environmental stress of plants in mixtures increased the relative weight of roots, which resulted in decreasing the root-shoot ratio (RSR.

  19. Secretome of Trichoderma interacting with maize roots: role in induced systemic resistance.

    Science.gov (United States)

    Lamdan, Netta-Li; Shalaby, Samer; Ziv, Tamar; Kenerley, Charles M; Horwitz, Benjamin A

    2015-04-01

    Trichoderma virens is a biocontrol agent used in agriculture to antagonize pathogens of crop plants. In addition to direct mycoparasitism of soil-borne fungal pathogens, T. virens interacts with roots. This interaction induces systemic resistance (ISR), which reduces disease in above-ground parts of the plant. In the molecular dialog between fungus and plant leading to ISR, proteins secreted by T. virens provide signals. Only a few such proteins have been characterized previously. To study the secretome, proteins were characterized from hydroponic culture systems with T. virens alone or with maize seedlings, and combined with a bioassay for ISR in maize leaves infected by the pathogen Cochliobolus heterostrophus. The secreted protein fraction from coculture of maize roots and T. virens (Tv+M) was found to have a higher ISR activity than from T. virens grown alone (Tv). A total of 280 fungal proteins were identified, 66 showing significant differences in abundance between the two conditions: 32 were higher in Tv+M and 34 were higher in Tv. Among the 34 found in higher abundance in Tv and negatively regulated by roots were 13 SSCPs (small, secreted, cysteine rich proteins), known to be important in the molecular dialog between plants and fungi. The role of four SSCPs in ISR was studied by gene knockout. All four knockout lines showed better ISR activity than WT without affecting colonization of maize roots. Furthermore, the secreted protein fraction from each of the mutant lines showed improved ISR activity compared with WT. These SSCPs, apparently, act as negative effectors reducing the defense levels in the plant and may be important for the fine tuning of ISR by Trichoderma. The down-regulation of SSCPs in interaction with plant roots implies a revision of the current model for the Trichoderma-plant symbiosis and its induction of resistance to pathogens.

  20. Impact of treated wastewater on growth, respiration and hydraulic conductivity of citrus root systems in light and heavy soils.

    Science.gov (United States)

    Paudel, Indira; Cohen, Shabtai; Shaviv, Avi; Bar-Tal, Asher; Bernstein, Nirit; Heuer, Bruria; Ephrath, Jhonathan

    2016-06-01

    Roots interact with soil properties and irrigation water quality leading to changes in root growth, structure and function. We studied these interactions in an orchard and in lysimeters with clay and sandy loam soils. Minirhizotron imaging and manual sampling showed that root growth was three times lower in the clay relative to sandy loam soil. Treated wastewater (TWW) led to a large reduction in root growth with clay (45-55%) but not with sandy loam soil (hydraulic conductivity was severely reduced in clay soil. Treated wastewater increased respiration rate and reduced hydraulic conductivity of all root orders in clay but only of the lower root orders in sandy loam soil. Loss of hydraulic conductivity increased with root order in clay and clay irrigated with TWW. Respiration and hydraulic properties of all root orders were significantly affected by sodium-amended TWW in sandy loam soil. These changes in root order morphology, anatomy, physiology and hydraulic properties indicate rapid and major modifications of root systems in response to differences in soil type and water quality.

  1. Systemic distribution of sup 14 C-labeled formaldehyde applied in the root canal following pulpectomy

    Energy Technology Data Exchange (ETDEWEB)

    Hata, G.I.; Nishikawa, I.; Kawazoe, S.; Toda, T.

    1989-11-01

    The systemic distribution of {sup 14}C-labeled formaldehyde which had been placed in the root canals of the canines of cats following pulpectomies was studied using liquid scintillation counting and whole-body autoradiographic technique. Radioactive {sup 14}C which had been placed in the canals was found in the plasma 30 min after the root canal procedure. The recovery of systemic {sup 14}C radioactivity increased with time. In addition, it seemed that approximately 3% of the dose placed in the teeth was excreted in the urine within 36 h. Whole-body autoradiograms indicated extensive concentration of {sup 14}C radioactivity in tissues other than those analyzed with the liquid scintillation technique.

  2. Characterization of the soil fertility and root system of restinga forests

    Directory of Open Access Journals (Sweden)

    Rodolfo Martins Bonilha

    2012-12-01

    Full Text Available The Restinga vegetation consists of a mosaic of plant communities, which are defined by the characteristics of the substrates, resulting from the type and age of the depositional processes. This mosaic complex of vegetation types comprises restinga forest in advanced (high restinga and medium regeneration stages (low restinga, each with particular differentiating vegetation characteristics. The climate along the coast is tropical (Köppen. Of all ecosystems of the Atlantic Forest, Restinga is the most fragile and susceptible to anthropic disturbances. Plants respond to soil characteristics with physiological and morphological modifications, resulting in changes in the architecture (spatial configuration of the root system. The purpose of this study was to characterize the soil fertility of high and low restinga forests, by chemical and physical parameters, and its relation to the root system distribution in the soil profile. Four locations were studied: (1 Ilha Anchieta State Park, Ubatuba; (2 two Ecological Stations of Jureia-Itatins and of Chauás, in the municipality of Iguape; (3 Vila de Pedrinhas in the municipality of Ilha Comprida; and (4 Ilha do Cardoso State Park, Cananeia. The soil fertility (chemical and physical properties was analyzed in the layers 0-5, 0-10, 0-20, 20-40 and 40-60 cm. In addition, the distribution of the root system in the soil profile was evaluated, using digital images and the Spring program. It was concluded that the root system of all vegetation types studied is restricted to the surface layers, 0-10 and 10-20 cm, but occupies mainly the 0-10 cm layer (70 %; that soil fertility is low in all environments studied, with base saturation values below 16 %, since most exchange sites are occupied by aluminum; and that restinga vegetation is edaphic.

  3. Comparison of Dentinal Crack Formation With Reciproc, Mtwo and ProTaper Root Canal Preparation Systems

    Directory of Open Access Journals (Sweden)

    Nazari Moghaddam

    2016-06-01

    Full Text Available Background Instrumentation with rotary instruments could potentially cause dentinal cracks possibly leading to tooth fracture. Reciproc files require a single file to finalize the root canal preparation and the effect of this procedure has not been compared with other systems. Objectives The aim of this study was to compare the incidence of dentinal micro-cracks following root canal preparations with ProTaper, Mtwo and Reciproc files. Materials and Methods In an experimental in vitro trial, 80 maxillary and mandibular first molars were selected and their crowns and distal roots were cut. The roots were then examined to remove any previous cracks and defects. An impression polyether material was used to simulate teeth periodontal ligament (PDL. The teeth were divided to four experimental groups (n = 20 and prepared using Reciproc, Mtwo and ProTaper or remained unprepared as a control group. The specimens were then sectioned horizontally on 3, 5 and 9 mm from the apex and number of micro-cracks was determined by stereomicroscope. The incidence of dentinal cracks on different systems or sections were statistically analyzed by means of the chi-square test. Results Dentinal defects on 3-mm, 5-mm and 9-mm sections from the apex were noted in 10 (5.6%; 7 (3.9% and 9 (5.0% samples of all, respectively. Following canal preparation using Reciproc, ProTaper and Mtwo systems, the defects were observed in 7 (3.9%, 12 (6.7% and 7 (3.9% the sections, respectively. No significant differences were observed regarding the defect incidence on the studied instrumentation files or sections. Conclusions Regarding the study limitations, dentinal cracks were observed in all files and distances from the apex. Although there was more crack incidence in ProTaper files, no significant differences were noted regarding the studied systems and sections from the apex.

  4. On Using of the Personal Computer as to Determining Root Locus of the Characteristic Equations in the Systems

    OpenAIRE

    藤塚, 幸一; 中川, 孝之

    1984-01-01

    We have studied the solutions of elemen tary problems on the control systems and the graphical method as to determining root locus of the characteristic equations by using the BASIC programs of digital computer.In this paper, we have described the results of BASIC programs of these methods and constructed the figures of root locus of these equations in the s-plane.

  5. On stochastic modelling of groundwater uptake in semi-arid water-limited systems: root density and seasonality effects

    NARCIS (Netherlands)

    Vervoort, R.W.; Zee, van der S.E.A.T.M.

    2012-01-01

    In recent ecohydrological modelling, a common basis has been found in methodology and axiomas, such as the minimalist, systems analysis approach and a piecewise linear root zone water loss function. In this paper, we consider the loss function for root zones in contact with ground water through capi

  6. Adjustment of Forest Ecosystem Root Respiration as Temperature Warms

    Institute of Scientific and Technical Information of China (English)

    Andrew J. Burton; Jerry M. Melillo; Serita D. Frey

    2008-01-01

    Adjustment of ecosystem root respiration to warmer climatic conditions can alter the autotrophic portion of soil respiration and influence the amount of carbon available for biomass production. We examined 44 published values of annual forest root respiration and found an increase in ecosystem root respiration with increasing mean annual temperature (MAT),but the rate of this cross-ecosystem increase (Q10 = 1.6) is less than published values for short-term responses of root respiration to temperature within ecosystems (Q10 = 2-3). When specific root respiration rates and root biomass values were examined, there was a clear trend for decreasing root metabolic capacity (respiration rate at a standard temperature) with increasing MAT. There also were tradeoffs between root metabolic capacity and root system biomass, such that there were no instances of high growing season respiration rates and high root biomass occurring together. We also examined specific root respiration rates at three soil warming experiments at Harvard Forest, USA, and found decreases in metabolic capacity for roots from the heated plots. This decline could be due to either physiological acclimation or to the effects of co-occurring drier soils on the measurement date. Regardless of the cause, these findings clearly suggest that modeling efforts that allow root respiration to increase exponentially with temperature, with Qt0 values of 2 or more, may over-predict root contributions to ecosystem CO2 efflux for future climates and underestimate the amount of C available for other uses,including net primary productivity.

  7. Building A High Performance Parallel File System Using Grid Datafarm and ROOT I/O

    CERN Document Server

    Morita, Y; Watase, Y; Tatebe, Osamu; Sekiguchi, S; Matsuoka, S; Soda, N; Dell'Acqua, A

    2003-01-01

    Sheer amount of petabyte scale data foreseen in the LHC experiments require a careful consideration of the persistency design and the system design in the world-wide distributed computing. Event parallelism of the HENP data analysis enables us to take maximum advantage of the high performance cluster computing and networking when we keep the parallelism both in the data processing phase, in the data management phase, and in the data transfer phase. A modular architecture of FADS/ Goofy, a versatile detector simulation framework for Geant4, enables an easy choice of plug-in facilities for persistency technologies such as Objectivity/DB and ROOT I/O. The framework is designed to work naturally with the parallel file system of Grid Datafarm (Gfarm). FADS/Goofy is proven to generate 10^6 Geant4-simulated Atlas Mockup events using a 512 CPU PC cluster. The data in ROOT I/O files is replicated using Gfarm file system. The histogram information is collected from the distributed ROOT files. During the data replicatio...

  8. [Photoelastic stress analysis of root dentin with different composite resin post and core systems and crowns].

    Science.gov (United States)

    Takei, Hidenori

    2010-03-01

    Much research has been reported about post and core systems with composite resin, but the influence of the different types of prefabricated posts on the distribution of stress in the root has not yet been elucidated. It is necessary to clarify the influence of the relationship between core and crown materials to obtain combined restorations. The aim of this study is to analyze the influence of the combination of various post and core systems and different kinds of crown material on the stress distribution in the root. Six 2-dimensional photoelastic premolar models were designed. Three types of post and core systems (composite resin post and core, composite resin core with the fiber post, and composite resin core with a prefabricated stainless steel post) and two kinds of crown materials (metal and hybrid-type hard composite resin) were fabricated and cemented to each model. In these models, we applied a load of 200 N at an angle of 45 degrees to the tooth axis and analyzed the fringe order using a transmission polariscope. As a result, it has been clarified that the combination of the post and core and the crown plays an important role in preventing stress concentration within root Stress concentration can be prevented using a crown fabricated with a high-elastic modulus for the post and core with a high-elastic modulus, and a crown fabricated with a low-elastic modulus for the post and core with a low-elastic modulus.

  9. Long-term in vitro system for maintenance and amplification of root-knot nematodes in Cucumis sativus roots

    Directory of Open Access Journals (Sweden)

    Fernando E. eDíaz-Manzano

    2016-02-01

    Full Text Available Root-knot nematodes (RKN are polyphagous plant-parasitic roundworms that produce large crop losses, representing a relevant agricultural pest worldwide. After infection, they induce swollen root structures called galls containing giant cells (GCs indispensable for nematode development. Among efficient control methods are biotechnology-based strategies that require a deep knowledge of underlying molecular processes during the plant-nematode interaction. Methods of achieving this knowledge include the application of molecular biology techniques such as transcriptomics (massive sequencing or microarray hybridization, proteomics or metabolomics. These require aseptic experimental conditions, as undetected contamination with other microorganisms could compromise the interpretation of the results. Herein, we present a simple, efficient and long-term method for nematode amplification on cucumber roots grown in vitro. Amplification of juveniles (J2 from the starting inoculum is around 40-fold. The method was validated for three Meloidogyne species (M. javanica, M. incognita and M. arenaria, producing viable and robust freshly hatched J2s. These can be used for further in vitro infection of different plant species such as Arabidopsis, tobacco and tomato, as well as enough J2s to maintain the population. The method allowed maintenance of around 90 Meloidogyne spp. generations (one every two months from a single initial female over 15 years.

  10. Prioritizing quantitative trait loci for root system architecture in tetraploid wheat.

    Science.gov (United States)

    Maccaferri, Marco; El-Feki, Walid; Nazemi, Ghasemali; Salvi, Silvio; Canè, Maria Angela; Colalongo, Maria Chiara; Stefanelli, Sandra; Tuberosa, Roberto

    2016-02-01

    Optimization of root system architecture (RSA) traits is an important objective for modern wheat breeding. Linkage and association mapping for RSA in two recombinant inbred line populations and one association mapping panel of 183 elite durum wheat (Triticum turgidum L. var. durum Desf.) accessions evaluated as seedlings grown on filter paper/polycarbonate screening plates revealed 20 clusters of quantitative trait loci (QTLs) for root length and number, as well as 30 QTLs for root growth angle (RGA). Divergent RGA phenotypes observed by seminal root screening were validated by root phenotyping of field-grown adult plants. QTLs were mapped on a high-density tetraploid consensus map based on transcript-associated Illumina 90K single nucleotide polymorphisms (SNPs) developed for bread and durum wheat, thus allowing for an accurate cross-referencing of RSA QTLs between durum and bread wheat. Among the main QTL clusters for root length and number highlighted in this study, 15 overlapped with QTLs for multiple RSA traits reported in bread wheat, while out of 30 QTLs for RGA, only six showed co-location with previously reported QTLs in wheat. Based on their relative additive effects/significance, allelic distribution in the association mapping panel, and co-location with QTLs for grain weight and grain yield, the RSA QTLs have been prioritized in terms of breeding value. Three major QTL clusters for root length and number (RSA_QTL_cluster_5#, RSA_QTL_cluster_6#, and RSA_QTL_cluster_12#) and nine RGA QTL clusters (QRGA.ubo-2A.1, QRGA.ubo-2A.3, QRGA.ubo-2B.2/2B.3, QRGA.ubo-4B.4, QRGA.ubo-6A.1, QRGA.ubo-6A.2, QRGA.ubo-7A.1, QRGA.ubo-7A.2, and QRGA.ubo-7B) appear particularly valuable for further characterization towards a possible implementation of breeding applications in marker-assisted selection and/or cloning of the causal genes underlying the QTLs.

  11. New calorimetric system and some results of water phase transition research in plant roots.

    Science.gov (United States)

    Bakradze, N; Kiziria, E; Sokhadze, V; Gogichaishvili, Sh; Vardidze, E

    2007-01-01

    The principle of operation and main parameters of the recently created scanning differential reverse microcalorimeter of the new generation are presented. The microcalorimeter is destined for studying water crystallization and ice melting processes in heterogeneous systems, including plant and animal cells and tissues in the temperature range of 20 to -55 degrees C. In order to obtain maximum information from the experimental results respective algorithms and applied software package were developed. The results of studies of water crystallization and ice melting processes in different parts of common plantain (Plantago major L.) root, as a certain model system, can give us information on the peculiarities of the studied processes in complex, heterogeneous systems.

  12. 78 FR 32256 - Privacy Act of 1974; Report of an Altered CMS System of Records Notice

    Science.gov (United States)

    2013-05-29

    ... HUMAN SERVICES Centers for Medicare & Medicaid Services Privacy Act of 1974; Report of an Altered CMS System of Records Notice AGENCY: Centers for Medicare & Medicaid Services (CMS), Department of Health and... requirements of the Privacy Act of 1974 (5 USC 552a), CMS proposes the following alterations to existing...

  13. 75 FR 60468 - Privacy Act of 1974; Report of an Altered System of Records

    Science.gov (United States)

    2010-09-30

    ... HUMAN SERVICES Health Resources and Services Administration Privacy Act of 1974; Report of an Altered... requirements of the Privacy Act of 1974, the Health Resources and Services Administration (HRSA) is proposing... alterations are to update the system name, authority, and location; make a minor change to the purposes,...

  14. Primitive Liquid Water of the Solar System in an Aqueous Altered Carbonaceous Chondrite

    Science.gov (United States)

    Tsuchiyama, A.; Miyake, A.; Kitayama, A.; Matsuno, J.; Takeuchi, A.; Uesugi, K.; Suzuki, Y.; Nakano, T.; Zolensky, M. E.

    2016-01-01

    Non-destructive 3D observations of the aqueous altered CM chondrite Sutter's Mill using scanning imaging x-ray microscopy (SIXM) showed that some of calcite and enstatite grains contain two-phase inclusion, which is most probably composed of liquid water and bubbles. This water should be primitive water responsible for aqueous alteration in an asteroid in the early solar system.

  15. Centering and transportation: in vitro evaluation of continuous and reciprocating systems in curved root canals

    Science.gov (United States)

    Navós, Beatriz Vilas; Hoppe, Carolina Bender; Mestieri, Leticia Boldrin; Böttcher, Daiana Elizabeth; Só, Marcus Vinicius Reis; Grecca, Fabiana Soares

    2016-01-01

    Context: One of the goals of endodontic therapy is the shaping and cleaning of the root canal system. In recent years, there has been multiple systems instrumentation, and changes in their dynamics are central to maintain the original shape of the canal after preparation. Aims: The aim of this study was to evaluate centering and transportation in curved root canals after using ProTaper® and MTwo® in continuous rotation, Reciproc® in reciprocating motion, and a step-down manual instrumentation technique. Settings and Design: Mesiobuccal roots of human extracted the first and second maxillary molars were selected and the canals (n = 60) were divided into four groups according to the preparation techniques: PT-ProTaper®; MT-MTwo®; RE-Reciproc®; MI-manual instrumentation. Subjects and Methods: The final apical diameter was standardized to a size 25. Centering and transportation were evaluated by cone-beam computed tomography and Adobe Photoshop 8.0 software. Statistical Analysis Used: The data were statistically analyzed by ANOVA and Tukey post hoc. Results: Results of transportation showed no statistical differences (P > 0.05) between groups, and significantly, difference (P ProTaper® and Reciproc® was found when evaluating centering ability in the apical third. Conclusions: We concluded that there were no differences in transportation between the evaluated systems for the preparation of curved root canals with an apical instrumentation diameter of #25. For centering ability, in the apical third, ProTaper® presented worst behavior when compared to Reciproc®. PMID:27656071

  16. Chemical transport in geothermal systems in Iceland: Evidence from hydrothermal alteration

    Science.gov (United States)

    Franzson, Hjalti; Zierenberg, Robert; Schiffman, Peter

    2008-06-01

    This study focuses on the chemical changes in basaltic rocks in fossil low- and high-temperature hydrothermal systems in Iceland. The method used takes into account the amount of dilution caused by vesicle and vein fillings in the rocks. The amount of dilution allows a calculation of the primary concentration of the immobile element Zr, and by multiplying the composition of the altered rock by the ratio of Zr (protolith)/Zr (altered rock) one can compute the mass addition caused by the dilution of the void fillings, and also make a direct comparison with the likely protoliths from the same areas. The samples were divided into three groups; two from Tertiary fossil high-temperature systems (Hafnarfjall, Geitafell), and the third group from a low temperature, zeolite-altered plateau basalt succession. The results show that hydrothermally altered rocks are enriched in Si, Al, Fe, Mg and Mn, and that Na, K and Ca are mobile but show either depletion or enrichment. The elements that are immobile include Zr, Y, Nb and probably Ti. The two high-temperature systems show quite similar chemical alteration trends, an observation which may apply to Icelandic fresh water high-temperature systems in general. The geochemical data show that the major changes in the altered rocks from Icelandic geothermal systems may be attributed to addition of elements during deposition of pore-filling alteration minerals. A comparison with seawater-dominated basalt-hosted hydrothermal systems shows much greater mass flux within the seawater systems, even though both systems have similar alteration assemblages. The secondary mineral assemblages seem to be controlled predominantly by the thermal stability of the alteration phases and secondarily by the composition of the hydrothermal fluids.

  17. 78 FR 64196 - Privacy Act Altered System of Records

    Science.gov (United States)

    2013-10-28

    ..., Biographical Files (78 FR 171). In that notice, the Department announced its intent to amend that system of..., Biographical Files. The notice of proposed amendment to this system of records was published in the Federal..., Biographical Files and Social Networks. The amendment serves to modify the system of records by...

  18. Endodontic treatment of mandibular molar with root dilaceration using Reciproc single-file system.

    Science.gov (United States)

    Meireles, Daniely Amorin; Bastos, Mariana Mena Barreto; Marques, André Augusto Franco; Garcia, Lucas da Fonseca Roberti; Sponchiado, Emílio Carlos

    2013-08-01

    Biomechanical preparation of root canals with accentuated curvature is challenging. New rotatory systems, such as Reciproc, require a shorter period of time to prepare curved canals, and became a viable alternative for endodontic treatment of teeth with root dilaceration. Thus, this study aimed to report a clinical case of endodontic therapy of root with accentuated dilaceration using Reciproc single-file system. Mandibular right second molar was diagnosed as asymptomatic irreversible pulpitis. Pulp chamber access was performed, and glide path was created with #10 K-file (Dentsply Maillefer) and PathFile #13, #16 and #19 (Dentsply Maillefer) up to the temporary working length. The working length measured corresponded to 20 mm in the mesio-buccal and mesio-lingual canals, and 22 mm in the distal canal. The R25 file (VDW GmbH) was used in all the canals for instrumentation and final preparation, followed by filling with Reciproc gutta-percha cones (VDW GmbH) and AH Plus sealer (Dentsply Maillefer), using thermal compaction technique. The case has been receiving follow-up for 6 mon and no painful symptomatology or periapical lesions have been found. Despite the difficulties, the treatment could be performed in a shorter period of time than the conventional methods.

  19. Root system architecture: opportunities and constraints for genetic improvement of crops.

    Science.gov (United States)

    de Dorlodot, Sophie; Forster, Brian; Pagès, Loïc; Price, Adam; Tuberosa, Roberto; Draye, Xavier

    2007-10-01

    Abiotic stresses increasingly curtail crop yield as a result of global climate change and scarcity of water and nutrients. One way to minimize the negative impact of these factors on yield is to manipulate root system architecture (RSA) towards a distribution of roots in the soil that optimizes water and nutrient uptake. It is now established that most of the genetic variation for RSA is driven by a suite of quantitative trait loci. As we discuss here, marker-assisted selection and quantitative trait loci cloning for RSA are underway, exploiting genomic resources, candidate genes and the knowledge gained from Arabidopsis, rice and other crops. Nonetheless, efficient and accurate phenotyping, modelling and collaboration with breeders remain important challenges, particularly when defining ideal RSA for different crops and target environments.

  20. Optimizing Culture System of Ri T-DNA Transformed Roots for Citrus grandis cv. Changshou Shatian You

    Institute of Scientific and Technical Information of China (English)

    YANG Xiao-hong; SUN Zhong-hai; TONG Rui-jian

    2006-01-01

    Genetic transformation experiments of the different explants from Citrus grandis cv. Changshou Shatian You infected with Agrobacterium rhizogenes were carried out in darkness or in light. The optimizing culture system of Ri T-DNA transformed roots for C. grandis cv. Changshou Shatian You was constructed as follows: After the ventral wounded striations on the single activation cotyledon were inoculated by A. rhizogenes A4 (logarithmic period), they were cocultured at (25 ± 2)℃ in darkness for 25-30 days; some transformed roots were generated from wounded striations of most cotyledons. The genetically transformed ratio is (83 ± 11)%. Axenic Ri T-DNA transformed roots (hairy roots) were harvested after five subcultures. Explants were activated on MT medium. The MS medium was used for subculture of transformed roots. Mass Ri T-DNA transformed roots in which the hormone was produced independently were harvested from this optimizing culture system. White, fresh Ri T-DNA transformed roots were (1.14 ± 0.07) cm long, (0.73 ± 0.04) mm wide, and the growth direction of transformed roots was negative geotropism.

  1. Effects of Exogenous Putrescine on Mycorrhiza, Root System Architecture, and Physiological Traits of Glomus mosseae-Colonized Trifoliate Orange Seedlings

    Directory of Open Access Journals (Sweden)

    Qiang-Sheng WU

    2012-11-01

    Full Text Available Putresince (Put as one of the important polyamines (PAs has been identified to regulate mycorrhizal development of citrus plants. The present study was to screen an efficient concentration of Put application at the range of 0.05-1 mM on the trifoliate orange (Poncirus trifoliata seedlings colonized by Glomus mosseae, in terms of growth, root system architecture, and chlorophyll and carbohydrate contents. Compared to the non-Put treatment, all the Put treatments, especially 0.05 mM Put, significantly increased mycorrhizal colonization of tap root in addition to first, second, and third order lateral roots. The mycorrhizal seedlings treated by 0.05, 0.1, and 1 mM Put showed greater growth (stem diameter, height, leaf number, and fresh mass and root morphological properties ( tap root length, projected and surface areas, and volume and higher numbers of first, second, and third order lateral roots. Bio-molecules like chlorophyll a, total chlorophyll, and carotenoid contents of the seedlings were significantly increased by the Put treatments at 0.05-1 mM. All exogenous Put application at the range of 0.05-1 mM significantly decreased sucrose contents but increased glucose contents of leaves and roots. This study suggests that exogenous Put can significantly improve growth performance and root system architecture, besides changes in physiological traits of AMF seedlings. The 0.05 mM concentration of Put showed the best effects.

  2. The root endophyte fungus Piriformospora indica leads to early flowering, higher biomass and altered secondary metabolites of the medicinal plant, Coleus forskohlii.

    Science.gov (United States)

    Das, Aparajita; Kamal, Shwet; Shakil, Najam Akhtar; Sherameti, Irena; Oelmüller, Ralf; Dua, Meenakshi; Tuteja, Narendra; Johri, Atul Kumar; Varma, Ajit

    2012-01-01

    This study was undertaken to investigate the influence of plant probiotic fungus Piriformospora indica on the medicinal plant C. forskohlii. Interaction of the C. forskohlii with the root endophyte P. indica under field conditions, results in an overall increase in aerial biomass, chlorophyll contents and phosphorus acquisition. The fungus also promoted inflorescence development, consequently the amount of p-cymene in the inflorescence increased. Growth of the root thickness was reduced in P. indica treated plants as they became fibrous, but developed more lateral roots. Because of the smaller root biomass, the content of forskolin was decreased. The symbiotic interaction of C. forskohlii with P. indica under field conditions promoted biomass production of the aerial parts of the plant including flower development. The plant aerial parts are important source of metabolites for medicinal application. Therefore we suggest that the use of the root endophyte fungus P. indica in sustainable agriculture will enhance the medicinally important chemical production.

  3. Alterations in the Coagulation System during Major Visceral Surgery in Children

    DEFF Research Database (Denmark)

    Kordjian, Hayarpi H; Nybo, Mads; Qvist, Niels

    2014-01-01

    Purpose. The description of the alterations in the hemostatic system in children undergoing abdominal surgery is sparse. Enhanced clinical outcomes for previously untreatable conditions have led to an increased incidence of venous thromboembolic complications. Alterations in children's coagulation...... system during major abdominal operations compared to minor procedures were examined. Methods. Children (0-12 years) undergoing either laparotomy, thoracotomy, or minor surgery were included. Participants were divided into two groups: group 1 was open laparotomy including operations for solid abdominal...

  4. TECHNOLOGY OF UNDERCROWN MICROIRRIGATION OF HORTICULTURAL CROPS TAKING INTO ACCOUNT THE FORMATION OF THEIR THE ROOT SYSTEM AND CONTOUR MOISTURE

    OpenAIRE

    Olgarenko V. I.; Olgarenko I. V.; Olgarenko G. V.; Mishchenko N. A.

    2015-01-01

    The article discusses the new technical solutions and the technology of undercrown micro-irrigation of horticultural crops, taking into account the formation of their root system and circuit humidification

  5. Computed tomography evaluation of rotary systems on the root canal transportation and centering ability

    Energy Technology Data Exchange (ETDEWEB)

    Pagliosa, Andre; Raucci-Neto, Walter; Silva-Souza, Yara Teresinha Correa; Alfredo, Edson, E-mail: ysousa@unaerp.br [Universidade de Ribeirao Preto (UNAERP), SP (Brazil). Fac. de Odontologia; Sousa-Neto, Manoel Damiao; Versiani, Marco Aurelio [Universidade de Sao Paulo (USP), Ribeirao Preto, SP (Brazil). Fac. de Odoentologia

    2015-03-01

    The endodontic preparation of curved and narrow root canals is challenging, with a tendency for the prepared canal to deviate away from its natural axis. The aim of this study was to evaluate, by cone-beam computed tomography, the transportation and centering ability of curved mesiobuccal canals in maxillary molars after biomechanical preparation with different nickel-titanium (NiTi) rotary systems. Forty teeth with angles of curvature ranging from 20° to 40° and radii between 5.0 mm and 10.0 mm were selected and assigned into four groups (n = 10), according to the biomechanical preparative system used: Hero 642 (HR), Liberator (LB), ProTaper (PT), and Twisted File (TF). The specimens were inserted into an acrylic device and scanned with computed tomography prior to, and following, instrumentation at 3, 6 and 9 mm from the root apex. The canal degree of transportation and centering ability were calculated and analyzed using one-way ANOVA and Tukey’s tests (α = 0.05). The results demonstrated no significant difference (p > 0.05) in shaping ability among the rotary systems. The mean canal transportation was: -0.049 ± 0.083 mm (HR); -0.004 ± 0.044 mm (LB); -0.003 ± 0.064 mm (PT); -0.021 ± 0.064 mm (TF). The mean canal centering ability was: -0.093 ± 0.147 mm (HR); -0.001 ± 0.100 mm (LB); -0.002 ± 0.134 mm (PT); -0.033 ± 0.133 mm (TF). Also, there was no significant difference among the root segments (p > 0.05). It was concluded that the Hero 642, Liberator, ProTaper, and Twisted File rotary systems could be safely used in curved canal instrumentation, resulting in satisfactory preservation of the original canal shape. (author)

  6. Gene Structure and Expression of the High-affinity Nitrate Transport System in Rice Roots

    Institute of Scientific and Technical Information of China (English)

    Chao Cai; Jun-Yi Wang; Yong-Guan Zhu; Qi-Rong Shen; Bin Li; Yi-Ping Tong; Zhen-Sheng Li

    2008-01-01

    Rice has a preference for uptake of ammonium over nitrate and can use ammonium-N efficiently. Consequently, transporters mediating ammonium uptake have been extensively studied, but nitrate transporters have been largely ignored. Recently,some reports have shown that rice also has high capacity to acquire nitrate from growth medium, so understanding the nitrate transport system in rice roots is very important for improving N use efficiency in rice. The present study identified four putative NRT2 and two putative NAR2 genes that encode components of the high-affinity nitrate transport system (HATS) in the rice (Oryza sativa L. subsp, japonica cv. Nipponbare) genome. OsNRT2.1 and OsNRT2.2 share an identical coding region sequence, and their deduced proteins are closely related to those from monocotyledonous plants. The two NAR2 proteins are closely related to those from mono-cotyledonous plants as well. However, OsNRT2.3 and OsNRT2.4 are more closely related to Arabidopsis NRT2 proteins. Relative quantitative reverse tranecdption-polymerase chain reaction analysis showed that all of the six genes were rapidly upregulated and then downregulated in the roots of N-starved rice plants after they were re-supplied with 0.2 mM nitrate, but the response to nitrate differed among gene members.The results from phylogenetic tree, gene structure and expression analysis implied the divergent roles for the individual members of the rice NRT2 and NAR2 families. High-affinity nitrate influx rates associated with nitrate induction in rice roots were investigated and were found to be regulated by external pH. Compared with the nitrate influx rates at pH 6.5, alkaline pH (pH 8.0) inhibited nitrate Influx, and acidic pH (pH 5.0) enhanced the nitrate influx In I h nitrate induced roots, but did not significantly affect that in 4 to 8 h nitrate induced roots.

  7. Root system architecture and receptivity to mycorrhizal infection in seedlings of Cedrus atlantica as affected by nitrogen source and concentration.

    Science.gov (United States)

    Boukcim, H; Pages, L; Plassard, C; Mousain, D

    2001-02-01

    Effects of nitrogen (N) source and concentration on root system architecture and receptivity to mycorrhizal infection were studied in seedlings of Atlas cedar (Cedrus atlantica Manetti) grown in root observation boxes in a controlled-environment chamber. Nitrogen was supplied in a solution containing either NO3-; or NH4+ at a concentration of either 0.25 or 5.0 mM. Root extension was recorded twice weekly by tracing the roots growing in contact with the transparent face of the root observation box. Among treatments, lateral root production and branching density were greatest with 5.0 mM NO3-. Inoculation with mycelium of Tricholoma cedrorum Malencon was carried out 3 months after the start of the N treatments. The highest percentage of mycorrhizal roots, and the greatest amounts of living mycelium (estimated by the ergosterol assay) were observed in the NO3- treatments. Differences in root branching density among the N treatments were insufficient to explain the observed differences among treatments in the extent of mycorrhizal infection of seedlings.

  8. 75 FR 5604 - Privacy Act of 1974; Report of an Altered System of Records

    Science.gov (United States)

    2010-02-03

    ... HUMAN SERVICES Health Resources and Services Administration Privacy Act of 1974; Report of an Altered... requirements of the Privacy Act of 1974, the Health Resources and Services Administration (HRSA) is proposing... of the system, the system location, categories of individuals covered by the system, categories...

  9. 75 FR 34755 - Privacy Act; Proposed Alteration to Existing Systems of Records, Single Family Mortgage Asset...

    Science.gov (United States)

    2010-06-18

    .... HUD/HS-59 SYSTEM NAME: Single Family Mortgage Asset Recovery Technology (SMART). SYSTEM LOCATION... URBAN DEVELOPMENT Privacy Act; Proposed Alteration to Existing Systems of Records, Single Family Mortgage Asset Recovery Technology (SMART/A80H) AGENCY: Office of the Chief Information Officer,...

  10. 76 FR 4483 - Privacy Act of 1974; Report of Modified or Altered System of Records

    Science.gov (United States)

    2011-01-25

    ... automatic sprinkler system, numerous automatic sensors (e.g., water, heat, smoke, etc.) are installed, and a proper mix of portable fire extinguishers is located throughout the computer room. The system is backed... Altered System of Records AGENCY: Division of Select Agents and Toxins (DSAT), Coordinating Office...

  11. 76 FR 4480 - Privacy Act of 1974; Report of Modified or Altered System of Records

    Science.gov (United States)

    2011-01-25

    ... sprinkler system, numerous automatic sensors (e.g., water, heat, smoke, etc.) are installed, and a proper... room is controlled by a cardkey and security code (numeric keypad) system. The local fire department is... Altered System of Records AGENCY: National Center for Environmental Health (NCEH), Coordinating Center...

  12. Combined Effects of Lanthanum (III) and Acid Rain on Antioxidant Enzyme System in Soybean Roots.

    Science.gov (United States)

    Zhang, Xuanbo; Du, Yuping; Wang, Lihong; Zhou, Qing; Huang, Xiaohua; Sun, Zhaoguo

    2015-01-01

    Rare earth element pollution (REEs) and acid rain (AR) pollution simultaneously occur in many regions, which resulted in a new environmental issue, the combined pollution of REEs and AR. The effects of the combined pollution on the antioxidant enzyme system of plant roots have not been reported. Here, the combined effects of lanthanum ion (La3+), one type of REE, and AR on the antioxidant enzyme system of soybean roots were investigated. In the combined treatment of La3+ (0.08 mM) and AR, the cell membrane permeability and the peroxidation of cell membrane lipid of soybean roots increased, and the superoxide dismutase, catalase, peroxidase and reduced ascorbic acid served as scavengers of reactive oxygen species. In other combined treatments of La3+ (0.40 mM, 1.20 mM) and AR, the membrane permeability, malonyldialdehyde content, superoxide dismutase activity, peroxidase activity and reduced ascorbic acid content increased, while the catalase activity decreased. The increased superoxide dismutase activity, peroxidase activity and reduced ascorbic acid content were inadequate to scavenge the excess hydrogen peroxide and superoxide, leading to the damage of the cell membrane, which was aggravated with the increase in the concentration of La3+ and the level of AR. The deleterious effects of the combined treatment of La3+ and AR were stronger than those of the single treatment of La3+ or AR. Moreover, the activity of antioxidant enzyme system in the combined treatment group was affected directly and indirectly by mineral element content in soybean plants.

  13. Effect of plumbagin free alcohol extract ofPlumbago zeylanica Linn. root on reproductive system of female Wistar rats

    Institute of Scientific and Technical Information of China (English)

    Gupta Sandeep; Ahirwar Dheeraj; Sharma Neeraj Kumar; Jhade Deenanath; Ahirwar Bharti

    2011-01-01

    Objective:To assess the effect of plumbagin-free alcohol extract (PFAE) ofPlumbago zeylanica Linn. (Plumbaginaceae) (P. zeylanica) root, on female reproductive system and fertility of adult female wistar rats.Methods: After the oral acute toxicity study, thePFAE was administered at two dose levels to perform the estrous cycle study, anti-implantation and abortifacient activity and hormonal analysis. However, the estrogenic/antiestrogenic activity was evaluated at only one most effective dose.Results:LD50cut-off was5 000 mg/kg body weight. The extract exhibited significant anti-implantation and abortifacient activity at the tested dose levels (300 and500 mg/kg,p.o.) (P<0.01). The extract dose-dependently decreased the levels of serum progesterone, follicle stimulating hormone and luteinizing hormone, while a dose-dependent increase was observed in the concentration of serum prolactin. The extract did not show any significant changes in structure and function of uterus when given alone, but when given along with ethinyl estradiol, it exhibited significant antiestrogenic activity in immature overiectomized female rats(P<0.001). Biochemical parameters in the serum/blood and haematological parameters did not show appreciable changes throughout and after the course of investigation. However, all the altered parameters returned to normalcy within30 days following withdrawal of treatment. Conclusions: All findings suggest that the antifertility activity of extract could possibly be through the changes in the implantation site, altered hormonal levels, prolonged estrous cycle and anti-estrogenic activity. Hence, the extract possesses reversible antifertility activity without adverse toxicity in female rats.

  14. Hydrothermal alteration in the Reykjanes geothermal system: Insights from Iceland deep drilling program well RN-17

    Science.gov (United States)

    Marks, Naomi; Schiffman, Peter; Zierenberg, Robert A.; Franzson, Hjalti; Fridleifsson, Gudmundur Ó.

    2010-01-01

    The Reykjanes geothermal system is a seawater-recharged hydrothermal system that appears to be analogous to seafloor hydrothermal systems in terms of host rock type and low water/rock alteration. The similarities make the Reykjanes system a useful proxy for seafloor vents. At some time during the Pleistocene, the system was dominated by meteoric water recharge, and fluid composition at Reykjanes has evolved through time as a result of changing proportions of meteoric water influx as well as differing pressure and temperature conditions. The purpose of this study is to characterize secondary mineralization, degree of metasomatic alteration, and bulk composition of cuttings from well RN-17 from the Reykjanes geothermal system. The basaltic host rock includes hyaloclastite, breccia, tuff, extrusive basalt, diabase, as well as a marine sedimentary sequence. The progressive hydrothermal alteration sequence observed with increasing depth results from reaction of geothermal fluids with the basaltic host rock. An assemblage of greenschist facies alteration minerals, including actinolite, prehnite, epidote and garnet, occurs at depths as shallow as 350 m; these minerals are commonly found in Icelandic geothermal systems at temperatures above 250 °C (Bird and Spieler, 2004). This requires hydrostatic pressures that exceed the present-day depth to boiling point curve, and therefore must record alteration at higher fluid pressures, perhaps as a result of Pleistocene glaciation. Major, minor, and trace element profiles of the cuttings indicate transitional MORB to OIB composition with limited metasomatic shifts in easily mobilized elements. Changes in MgO, K 2O and loss on ignition indicate that metasomatism is strongly correlated with protolith properties. The textures of alteration minerals reveal alteration style to be strongly dependent on protolith as well. Hyaloclastites are intensely altered with calc-silicate alteration assemblages comprising calcic hydrothermal

  15. Root-expressed maize lipoxygenase 3 negatively regulates induced systemic resistance to Colletotrichum graminicola in shoots.

    Science.gov (United States)

    Constantino, Nasie N; Mastouri, Fatemeh; Damarwinasis, Ramadhika; Borrego, Eli J; Moran-Diez, Maria E; Kenerley, Charley M; Gao, Xiquan; Kolomiets, Michael V

    2013-01-01

    We have previously reported that disruption of a maize root-expressed 9-lipoxygenase (9-LOX) gene, ZmLOX3, results in dramatic increase in resistance to diverse leaf and stalk pathogens. Despite evident economic significance of these findings, the mechanism behind this increased resistance remained elusive. In this study, we found that increased resistance of the lox3-4 mutants is due to constitutive activation of induced systemic resistance (ISR) signaling. We showed that ZmLOX3 lacked expression in leaves in response to anthracnose leaf blight pathogen Colletotrichum graminicola, but was expressed constitutively in the roots, thus, prompting our hypothesis: the roots of lox3-4 mutants are the source of increased resistance in leaves. Supporting this hypothesis, treatment of wild-type plants (WT) with xylem sap of lox3-4 mutant induced resistance to C. graminicola to the levels comparable to those observed in lox3-4 mutant. Moreover, treating mutants with the sap collected from WT plants partially restored the susceptibility to C. graminicola. lox3-4 mutants showed primed defense responses upon infection, which included earlier and greater induction of defense-related PAL and GST genes compared to WT. In addition to the greater expression of the octadecanoid pathway genes, lox3-4 mutant responded earlier and with a greater accumulation of H2O2 in response to C. graminicola infection or treatment with alamethicin. These findings suggest that lox3-4 mutants display constitutive ISR-like signaling. In support of this idea, root colonization by Trichoderma virens strain GV29-8 induced the same level of disease resistance in WT as the treatment with the mutant sap, but had no additional resistance effect in lox3-4 mutant. While treatment with T. virens GV29 strongly and rapidly suppressed ZmLOX3 expression in hydroponically grown WT roots, T. virens Δsml mutant, which is deficient in ISR induction, was unable to suppress expression of ZmLOX3, thus, providing genetic

  16. Advanced nutrient root-feeding system for conveyor-type cylindrical plant growth facilities for microgravity

    Science.gov (United States)

    Berkovich, Yu. A.; Krivobok, N. M.; Krivobok, A. S.; Smolyanina, S. O.

    2016-02-01

    A compact and reliable automatic method for plant nutrition supply is needed to monitor and control space-based plant production systems. The authors of this study have designed a nutrient root-feeding system that minimizes and regulates nutrient and water supply without loss of crop yields in a space greenhouse. The system involves an ion-exchange fibrous artificial soil (AS) BIONA-V3TM as the root-inhabited medium; a pack with slow-release fertilizer as the main source of nitrogen, phosphorus, and potassium; and a cartridge with granular mineral-rich ionite (GMRI) as a source of calcium, magnesium, sulfur, and iron. A controller equipped with an electrical conductivity meter controls the solution flow and concentration of the solution in the mixing tank at specified values. Experiments showed that the fibrous AS-stabilized pH of the substrate solution within the range of 6.0-6.6 is favorable to the majority of crops. The experimental data confirmed that this technique allowed solution preparation for crops in space greenhouses by means of pumping water through the cartridge and minimization of the AS stock onboard the space vehicle.

  17. Flexible Microsensor Array for the Root Zone Monitoring of Porous Tube Plant Growth System

    Science.gov (United States)

    Sathyan, Sandeep; Kim, Chang-Soo; Porterfield, D. Marshall; Nagle, H. Troy; Brown, Christopher S.

    2004-01-01

    Control of oxygen and water in the root zone is vital to support plant growth in the microgravity environment. The ability to control these sometimes opposing parameters in the root zone is dependent upon the availability of sensors to detect these elements and provide feedback for control systems. In the present study we demonstrate the feasibility of using microsensor arrays on a flexible substrate for dissolved oxygen detection, and a 4-point impedance microprobe for surface wetness detection on the surface of a porous tube (PT) nutrient delivery system. The oxygen microsensor reported surface oxygen concentrations that correlated with the oxygen concentrations of the solution inside the PT when operated at positive pressures. At negative pressures the microsensor shows convergence to zero saturation (2.2 micro mol/L) values due to inadequate water film formation on porous tube surface. The 4-point microprobe is useful as a wetness detector as it provides a clear differentiation between dry and wet surfaces. The unique features of the dissolved oxygen microsensor array and 4-point microprobe include small and simple design, flexibility and multipoint sensing. The demonstrated technology is anticipated to provide low cost, and highly reliable sensor feedback monitoring plant growth nutrient delivery system in both terrestrial and microgravity environments.

  18. Vascular Alterations and Sexual Function in Systemic Sclerosis

    Directory of Open Access Journals (Sweden)

    Ann Julie Impens

    2010-01-01

    Full Text Available Sexual dysfunction is common in systemic sclerosis (SSc. Male erectile dysfunction (MED has been reported in around 80% of subjects and more than half of female patients fulfill criteria for diagnosis as female sexual arousal Disorder (FSAD. While some evidence supports a role for cavernosal fibrosis, abundant data suggest that MED is yet another clinical feature of SSc related to vasculopathy. The contribution of vasculopathy to the more complex issues of female sexual dysfunction is less clear. Inhibitors of Type V phosphodiesterase are effective in men with MED secondary to SSc. Limited study in women suggests inconsistent effects on behavior (frequency but not on measures related to perfusion. Sexual activity is an important component of quality of life and an important domain for the caregiver to address; it is not clear that it warrants primary consideration as a consistent measure of scleroderma-related vasculopathy.

  19. Synchrotron X-ray microfluorescence measurement of metal distributions in Phragmites australis root system in the Yangtze River intertidal zone.

    Science.gov (United States)

    Feng, Huan; Zhang, Weiguo; Qian, Yu; Liu, Wenliang; Yu, Lizhong; Yoo, Shinjae; Wang, Jun; Wang, Jia Jun; Eng, Christopher; Liu, Chang Jun; Tappero, Ryan

    2016-07-01

    This study investigates the distributions of Br, Ca, Cl, Cr, Cu, K, Fe, Mn, Pb, Ti, V and Zn in Phragmites australis root system and the function of Fe nanoparticles in scavenging metals in the root epidermis using synchrotron X-ray microfluorescence, synchrotron transmission X-ray microscope measurement and synchrotron X-ray absorption near-edge structure techniques. The purpose of this study is to understand the mobility of metals in wetland plant root systems after their uptake from rhizosphere soils. Phragmites australis samples were collected in the Yangtze River intertidal zone in July 2013. The results indicate that Fe nanoparticles are present in the root epidermis and that other metals correlate significantly with Fe, suggesting that Fe nanoparticles play an important role in metal scavenging in the epidermis.

  20. Systemic alterations and their oral manifestations in pregnant women.

    Science.gov (United States)

    Silva de Araujo Figueiredo, Camilla; Gonçalves Carvalho Rosalem, Cíntia; Costa Cantanhede, Andre Luis; Abreu Fonseca Thomaz, Érika Bárbara; Fontoura Nogueira da Cruz, Maria Carmen

    2017-01-01

    The aims of this literature review are: to depict the main oral diseases that are related to pregnancy; to clarify some of the possible systemic mechanisms that are associated with these changes; and to address issues about oral care during pregnancy. A woman's organs undergo various physiological, neurological, and hormonal changes during pregnancy. Such changes occur gradually and are essential for the development of the fetus, providing what is needed for tissue formation and establishment of reserves for uterine and fetal life. In turn, the oral cavity shows some events during this period. Among the changes most frequently cited in the literature are pyogenic granuloma, gingivitis, and periodontitis. The inflammation of the periodontal tissues due to the formation of the biofilm increases dramatically in size and severity during the course of a normal pregnancy, even without changes in the amount of biofilm present. In addition, a decrease in salivary pH is observed in pregnant women and may lead to an increased incidence of dental caries in this period.

  1. Evaluation of Root Canal Preparation Using Rotary System and Hand Instruments Assessed by Micro-Computed Tomography

    OpenAIRE

    Stavileci, Miranda; Hoxha, Veton; Görduysus, Ömer; Tatar, Ilkan; Laperre, Kjell; Hostens, Jeroen; Küçükkaya, Selen; Muhaxheri, Edmond

    2015-01-01

    Background Complete mechanical preparation of the root canal system is rarely achieved. Therefore, the purpose of this study was to evaluate and compare the root canal shaping efficacy of ProTaper rotary files and standard stainless steel K-files using micro-computed tomography. Material/Methods Sixty extracted upper second premolars were selected and divided into 2 groups of 30 teeth each. Before preparation, all samples were scanned by micro-computed tomography. Thirty teeth were prepared w...

  2. Effectiveness of ProTaper retreatment system associated with organic solvents in the removal of root canal filling material

    OpenAIRE

    Guiotti, Flávia Angélica [UNESP; Kuga, Milton Carlos; Renato de Toledo LEONARDO; Gisselle Moraima CHÁVEZ-ANDRADE; Magro, Miriam Graziele [UNESP; Cavenago, Bruno Cavalini; Faria, Gisele

    2013-01-01

    Aim: To evaluate the effectiveness of ProTaper universal retreatment system in the removal of root canal filling material with thermomechanical compaction, in comparison to manualmechanical technique, associated with orange oil or eucalyptol. Materials and methods: Forty extracted lower incisors were filled with thermomechanical compaction technique. After 3 years, the root canal filling was removed by: G1 - manualmechanical technique with orange oil; G2 - manual-mechanical technique with euc...

  3. Split-root systems applied to the study of the legume-rhizobial symbiosis:What have we learned?

    Institute of Scientific and Technical Information of China (English)

    Estbaliz Larrainzar; Erena Gil-Quintana; Cesar Arrese-Igor; Esther M Gonzlez; Daniel Marino

    2014-01-01

    Split‐root system (SRS) approaches al ow the differential treatment of separate and independent root systems, while sharing a common aerial part. As such, SRS is a useful tool for the discrimination of systemic (shoot origin) versus local (root/nodule origin) regulation mechanisms. This type of approach is particularly useful when studying the complex regulatory mechanisms governing the symbiosis established between legumes and Rhizobium bacteria. The current work provides an overview of the main insights gained from the application of SRS approaches to understand how nodule number (nodulation autoregulation) and nitrogen fixation are control ed both under non‐stressful conditions and in response to a variety of stresses. Nodule number appears to be mainly control ed at the systemic level through a signal which is produced by nodule/root tissue, translocated to the shoot, and transmitted back to the root system, involving shoot Leu‐rich repeat receptor‐like kinases. In contrast, both local and systemic mechanisms have been shown to operate for the regulation of nitrogenase activity in nodules. Under drought and heavy metal stress, the regulation is mostly local, whereas the application of exogenous nitrogen seems to exert a regulation of nitrogen fixation both at the local and systemic levels.

  4. Phenotypic and molecular evaluation of cotton hairy roots as a model system for studying nematode resistance

    Science.gov (United States)

    The cellular mechanisms that mediate resistance of allotetraploid cotton (Gossypium spp.) to root-knot nematode (Meloidogyne incognita) and reniform nematode (Rotylenchulus reniformis) are poorly understood. Here, Agrobacterium rhizogenes-induced hairy roots were investigated as a possible research...

  5. Changes in the ascorbate system in the response of pumpkin (Cucurbita pepo L.) roots to aluminium stress.

    Science.gov (United States)

    Dipierro, Nunzio; Mondelli, Donato; Paciolla, Costantino; Brunetti, Gennaro; Dipierro, Silvio

    2005-05-01

    The involvement of the ascorbate (AsA) system in the response of pumpkin (Cucurbita pepo L.) roots to aluminium stress was studied. The treatment of 5-day-old pumpkin seedlings with 50 microM aluminium sulphate resulted in approximately 60% inhibition of root growth within 48-60 h of treatment, while aluminium accumulated in the roots reaching a maximum within 48h. During the same period, the hydrogen peroxide content of the roots was strongly enhanced. The increased level of hydrogen peroxide was matched by both increased ascorbate peroxidase (APX) (EC 1.11.1.11) activity and ascorbate free radical reductase (AFRR) (EC 1.1.5.4) activity, while dehydroascorbate reductase (DHAR) (EC 1.8.5.1) and glutathione reductase (GR) (EC 1.6.4.2) did not change. The levels of AsA in the roots were also increased by the Al treatment. It was concluded that an oxidative burst is probably involved in the toxicity of Al in pumpkin roots and that plants react to the enhanced production of reactive oxygen species by expressing higher levels of scavenging systems such as the AsA-APX system.

  6. 75 FR 5094 - Privacy Act of 1974; Report of an Altered System of Records

    Science.gov (United States)

    2010-02-01

    ... HUMAN SERVICES Health Resources and Services Administration Privacy Act of 1974; Report of an Altered... the requirements of the Privacy Act of 1974, the Health Resources and Services Administration (HRSA... location of this system and the system manager, to modify routine use number 6, correct...

  7. 75 FR 57806 - Privacy Act of 1974; Report of an Altered System of Records

    Science.gov (United States)

    2010-09-22

    ... HUMAN SERVICES Health Resources and Services Administration Privacy Act of 1974; Report of an Altered System of Records AGENCY: Department of Health and Human Services (HHS), Health Resources and Services... Health and Human Services (DHHS) may disclose information from this system of records to a...

  8. 76 FR 4446 - Privacy Act of 1974; Report of Modified or Altered System of Records

    Science.gov (United States)

    2011-01-25

    ... locked rooms. The local fire department is located nearby. The computer room is protected by an automatic sprinkler system, automatic sensors (e.g., water, heat, smoke, etc.) are installed, and portable fire... Altered System of Records AGENCY: National Center for HIV, STD and TB Prevention (NCHSTP), Department...

  9. 76 FR 4443 - Privacy Act of 1974; Report of Modified or Altered System of Records

    Science.gov (United States)

    2011-01-25

    ... locked rooms. The local fire department is located nearby. The computer room is protected by an automatic sprinkler system, automatic sensors (e.g., water, heat, smoke, etc.) are installed, and portable fire... Altered System of Records AGENCY: National Center for HIV, STD and TB Prevention (NCHSTP), Centers...

  10. 76 FR 4438 - Privacy Act of 1974; Report of Modified or Altered System of Records

    Science.gov (United States)

    2011-01-25

    ... locked rooms. The local fire department is located nearby. The computer room is protected by an automatic sprinkler system, automatic sensors (e.g., water, heat, smoke, etc.) are installed, and portable fire... Altered System of Records AGENCY: Divisions of Tuberculosis Elimination, National Center for HIV, STD...

  11. 76 FR 4440 - Privacy Act of 1974; Report of Modified or Altered System of Records

    Science.gov (United States)

    2011-01-25

    ... locked rooms. The local fire department is located nearby. The computer room is protected by an automatic sprinkler system, automatic sensors (e.g., water, heat, smoke, etc.) are installed, and portable fire... Altered System of Records AGENCY: Division of Tuberculosis Elimination, National Center for HIV, STD...

  12. Analysis techniques for multivariate root loci. [a tool in linear control systems

    Science.gov (United States)

    Thompson, P. M.; Stein, G.; Laub, A. J.

    1980-01-01

    Analysis and techniques are developed for the multivariable root locus and the multivariable optimal root locus. The generalized eigenvalue problem is used to compute angles and sensitivities for both types of loci, and an algorithm is presented that determines the asymptotic properties of the optimal root locus.

  13. Potential of host plant resistance to the sugarbeet root maggot in an integrated pest management system

    Science.gov (United States)

    The performance of a hybrid with a sugarbeet root maggot (Tetanops myopaeformis von Röder) resistant pollinator was compared to the performance of an adapted susceptible hybrid at a location with root maggots present (St. Thomas, ND) and a location with no root maggots (Fargo, ND) in 2015 and 2016. ...

  14. Root carbon input in organic and inorganic fertilizer-based systems

    DEFF Research Database (Denmark)

    Chirinda, Ngoni; Olesen, Jørgen E; Porter, John

    2012-01-01

    Background and aims In agroecosystems, carbon (C) inputs come from plant roots, retained shoot residues and in some cases from applied manures. Manure and shoot derived C inputs are relatively easy to determine. Conversely, high costs associated with root measurements have caused knowledge on root...

  15. Rhizo-lysimetry: facilities for the simultaneous study of root behaviour and resource use by agricultural crop and pasture systems

    Directory of Open Access Journals (Sweden)

    Eberbach Philip L

    2013-01-01

    Full Text Available Abstract Background Rhizo-lysimeters offer unique advantages for the study of plants and their interactions with soils. In this paper, an existing facility at Charles Sturt University in Wagga Wagga Australia is described in detail and its potential to conduct both ecophysiological and ecohydrological research in the study of root interactions of agricultural crops and pastures is quantitatively assessed. This is of significance to future crop research efforts in southern Australia, in light of recent significant long-term drought events, as well as potential impacts of climate change as predicted for the region. The rhizo-lysimeter root research facility has recently been expanded to accommodate larger research projects over multiple years and cropping rotations. Results Lucerne, a widely-grown perennial pasture in southern Australia, developed an expansive root system to a depth of 0.9 m over a twelve month period. Its deeper roots particularly at 2.05 m continued to expand for the duration of the experiment. In succeeding experiments, canola, a commonly grown annual crop, developed a more extensive (approximately 300% root system than wheat, but exhibited a slower rate of root elongation at rates of 7.47 x 10–3 m day–1 for canola and 1.04 x10–2 m day–1 for wheat. A time domain reflectometry (TDR network was designed to accurately assess changes in soil water content, and could assess water content change to within 5% of the amount of water applied. Conclusions The rhizo-lysimetry system provided robust estimates of root growth and soil water change under conditions representative of a field setting. This is currently one of a very limited number of global research facilities able to perform experimentation under field conditions and is the largest root research experimental laboratory in the southern hemisphere.

  16. In vitro evaluation of efficacy of different rotary instrument systems for gutta percha removal during root canal retreatment

    Science.gov (United States)

    Joseph, Mercy; Malhotra, Amit; Rao, Murali; Sharma, Abhimanyu; Talwar, Sangeeta

    2016-01-01

    Background Complete removal of old filling material during root canal retreatment is fundamental for predictable cleaning and shaping of canal anatomy. Most of the retreatment methods tested in earlier studies have shown inability to achieve complete removal of root canal filling. Therefore the aim of this investigation was to assess the efficacy of three different rotary nickel titanium retreatment systems and Hedstrom files in removing filling material from root canals. Material and Methods Sixty extracted mandibular premolars were decoronated to leave 15 mm root. Specimen were hand instrumented and obturated using gutta percha and AH plus root canal sealer. After storage period of two weeks, roots were retreated with three (Protaper retreatment files, Mtwo retreatment files, NRT GPR) rotary retreatment instrument systems and Hedstroem files. Subsequently, samples were sectioned longitudinally and examined under stereomicroscope. Digital images were recorded and evaluated using Digital Image Analysing Software. The retreatment time was recorded for each tooth using a stopwatch. The area of canal and the residual filling material was recorded in mm2 and the percentage of remaining filling material on canal walls was calculated. Data was analysed using ANOVA test. Results Significantly less amount of residual filling material was present in protaper and Mtwo instrumented teeth (p Protaper instruments also required lesser time during removal of filling material followed by Mtwo instruments, NRT GPR files and Hedstrom files. Conclusions None of the instruments were able to remove the filling material completely from root canal. Protaper universal retreatment system and Mtwo retreatment files were more efficient and faster compared to NRT GPR fles and Hedstrom files. Key words:Gutta-percha removal, nickel titanium, root canal retreatment, rotary instruments. PMID:27703601

  17. Hydrothermal alteration of Hercynian granites, its significance to the evolution of geothermal systems in granitic rocks

    Energy Technology Data Exchange (ETDEWEB)

    Marques, Jose M.; Matias, Maria J.; Basto, Maria J.; Aires-Barros, Luis A. [Instituto Superior Tecnico, Centro de Petrologia e Geoquimica, Universidade Tecnica de Lisboa, Av. Rovisco Pais, 1049-001 Lisbon (Portugal); Carreira, Paula M. [Instituto Tecnologico e Nuclear, Estrada Nacional n 10, 2686 - 953 Sacavem (Portugal); Goff, Fraser E. [Earth and Planetary Sciences Department, Univ. of New Mexico, Albuquerque, NM 87131 (United States)

    2010-06-15

    We discuss geochemical and isotopic ({sup 18}O/{sup 16}O, {sup 2}H/{sup 1}H and {sup 87}Sr/{sup 86}Sr) data recording the hydrothermal alteration of northern Portuguese Hercynian granites by Na-HCO{sub 3}-CO{sub 2}-rich mineral waters. Whole-rock samples from drill cores of Vilarelho da Raia granite have {delta}{sup 18}O values in the +11.47 to +10.10 permille range. The lower values correspond to highly fractured granite samples displaying vein and pervasive alteration. In the pervasive alteration stage, which probably results from a convective hydrothermal system set up by the intrusion of the granites, the metamorphic waters are in equilibrium with hydrous minerals. In contrast, the vein alteration of these granitic rocks was caused by water of meteoric origin. The oxygen ratios between water (W) and rock (R), the so-called W/R ratios, obtained for the open system (where the heated water is lost from the system by escape to the surface) range between 0.05 and 0.11, suggesting that the recrystallization of the veins was influenced by a small flux of meteoric water. Stable isotope analyses performed on the cores show that the vein alteration stage relates to post-emplacement tectonic stresses acting on the granite, probably of late Hercynian age. Our results are consistent with the existence of two separate alteration events (pervasive and vein) caused by hydrothermal waters of different isotopic characteristics. The studies presented in this paper should be viewed as a natural analogue that uses the alteration features observed in a fossil geothermal system at Vilarelho da Raia to assess possible water-rock reactions presently occurring at depth in granitic rocks of the nearby Chaves area. (author)

  18. The Infection of Cucumber (Cucumis sativus L.) Roots by Meloidogyne incognita Alters the Expression of Actin-Depolymerizing Factor (ADF) Genes, Particularly in Association with Giant Cell Formation

    Science.gov (United States)

    Liu, Bin; Liu, Xingwang; Liu, Ying; Xue, Shudan; Cai, Yanling; Yang, Sen; Dong, Mingming; Zhang, Yaqi; Liu, Huiling; Zhao, Binyu; Qi, Changhong; Zhu, Ning; Ren, Huazhong

    2016-01-01

    Cucumber (Cucumis sativus L.) is threatened by substantial yield losses due to the south root-knot nematode (Meloidogyne incognita). However, understanding of the molecular mechanisms underlying the process of nematode infection is still limited. In this study, we found that M. incognita infection affected the structure of cells in cucumber roots and treatment of the cytoskeleton inhibitor (cytochalasin D) reduced root-knot nematode (RKN) parasitism. It is known that Actin-Depolymerizing Factor (ADF) affects cell structure, as well as the organization of the cytoskeleton. To address the hypothesis that nematode-induced abnormal cell structures and cytoskeletal rearrangements might be mediated by the ADF genes, we identified and characterized eight cucumber ADF (CsADF) genes. Phylogenetic analysis showed that the cucumber ADF gene family is grouped into four ancient subclasses. Expression analysis revealed that CsADF1, CsADF2-1, CsADF2-2, CsADF2-3 (Subclass I), and CsADF6 (Subclass III) have higher transcript levels than CsADF7-1, CsADF7-2 (Subclass II genes), and CsADF5 (Subclass IV) in roots. Members of subclass I genes (CsADF1, CsADF2-1, CsADF2-2, and CsADF2-3), with the exception of CsADF2-1, exhibited a induction of expression in roots 14 days after their inoculation (DAI) with nematodes. However, the expression of subclass II genes (CsADF7-1 and CsADF7-2) showed no significant change after inoculation. The transcript levels of CsADF6 (Subclass III) showed a specific induction at 21 DAI, while CsADF5 (Subclass IV) was weakly expressed in roots, but was strongly up-regulated as early as 7 DAI. In addition, treatment of roots with cytochalasin D caused an approximately 2-fold down-regulation of the CsADF genes in the treated plants. These results suggest that CsADF gene mediated actin dynamics are associated with structural changes in roots as a consequence of M. incognita infection. PMID:27695469

  19. The Infection of Cucumber (Cucumis sativus L. Roots by Meloidogyne incognita Alters the Expression of Actin-Depolymerizing Factor (ADF Genes, Particularly in Association with Giant Cell Formation

    Directory of Open Access Journals (Sweden)

    Bin Liu

    2016-09-01

    Full Text Available Cucumber (Cucumis sativus L. is threatened by substantial yield losses due to the south root-knot nematode (Meloidogyne incognita. However, understanding of the molecular mechanisms underlying the process of nematode infection is still limited. In this study, we found that M. incognita infection affected the structure of cells in cucumber roots and treatment of the cytoskeleton inhibitor (cytochalasin D reduced root-knot nematode (RKN parasitism. It is known that Actin-Depolymerizing Factor (ADF affects cell structure, as well as the organization of the cytoskeleton. To address the hypothesis that nematode-induced abnormal cell structures and cytoskeletal rearrangements might be mediated by the ADF genes, we identified and characterized eight cucumber ADF (CsADF genes. Phylogenetic analysis showed that the cucumber ADF gene family is grouped into four ancient subclasses. Expression analysis revealed that CsADF1, CsADF2-1, CsADF2-2, CsADF2-3 (Subclass I and CsADF6 (Subclass III have higher transcript levels than CsADF7-1, CsADF7-2 (Subclass II genes and CsADF5 (Subclass IV in roots. Members of subclass I genes (CsADF1, CsADF2-1, CsADF2-2 and CsADF2-3, with the exception of CsADF2-1, exhibited a induction of expression in roots 14 days after their inoculation (DAI with nematodes. However, the expression of subclass II genes (CsADF7-1 and CsADF7-2 showed no significant change after inoculation. The transcript levels of CsADF6 (Subclass III showed a specific induction at 21 DAI, while CsADF5 (Subclass IV was weakly expressed in roots, but was strongly up-regulated as early as 7 DAI. In addition, treatment of roots with cytochalasin D caused an approximately two-fold down-regulation of the CsADF genes in the treated plants. These results suggest that CsADF gene mediated actin dynamics are associated with structural changes in roots as a consequence of M. incognita infection.

  20. Photodynamic Antimicrobial Chemotherapy for Root Canal System Asepsis: A Narrative Literature Review.

    Science.gov (United States)

    Diogo, P; Gonçalves, T; Palma, P; Santos, J M

    2015-01-01

    Aim. The aim of this comprehensive literature review was to address the question: Does photodynamic therapy (PDT) improve root canal disinfection through significant bacterial reduction in the root canal system? Methodology. A comprehensive narrative literature review was performed to compare PDT effect with sodium hypochlorite as the comparative classical irrigant. Two reviewers independently conducted literature searches using a combination of medical subject heading terms and key words to identify relevant studies comparing information found in 7 electronic databases from January 2000 to May 2015. A manual search was performed on bibliography of articles collected on electronic databases. Authors were contacted to ask for references of more research not detected on the prior electronic and manual searches. Results. The literature search provided 62 titles and abstracts, from which 29 studies were related directly to the search theme. Considering all publications, 14 (48%) showed PDT to be more efficient in antimicrobial outcome than NaOCl (0.5-6% concentration) used alone and 2 (7%) revealed similar effects between them. Toluidine blue and methylene blue are the most used photosensitizers and most commonly laser has 660 nm of wavelength with a 400 nm diameter of intracanal fiber. Conclusions. PDT has been used without a well-defined protocol and still remains at an experimental stage waiting for further optimization. The level of evidence available in clinical studies to answer this question is low and at high risk of bias.

  1. Photodynamic Antimicrobial Chemotherapy for Root Canal System Asepsis: A Narrative Literature Review

    Directory of Open Access Journals (Sweden)

    P. Diogo

    2015-01-01

    Full Text Available Aim. The aim of this comprehensive literature review was to address the question: Does photodynamic therapy (PDT improve root canal disinfection through significant bacterial reduction in the root canal system? Methodology. A comprehensive narrative literature review was performed to compare PDT effect with sodium hypochlorite as the comparative classical irrigant. Two reviewers independently conducted literature searches using a combination of medical subject heading terms and key words to identify relevant studies comparing information found in 7 electronic databases from January 2000 to May 2015. A manual search was performed on bibliography of articles collected on electronic databases. Authors were contacted to ask for references of more research not detected on the prior electronic and manual searches. Results. The literature search provided 62 titles and abstracts, from which 29 studies were related directly to the search theme. Considering all publications, 14 (48% showed PDT to be more efficient in antimicrobial outcome than NaOCl (0.5–6% concentration used alone and 2 (7% revealed similar effects between them. Toluidine blue and methylene blue are the most used photosensitizers and most commonly laser has 660 nm of wavelength with a 400 nm diameter of intracanal fiber. Conclusions. PDT has been used without a well-defined protocol and still remains at an experimental stage waiting for further optimization. The level of evidence available in clinical studies to answer this question is low and at high risk of bias.

  2. Phytoremediation of TNT: C. roseus hairy roots as a model system

    Energy Technology Data Exchange (ETDEWEB)

    Lauritzen, J.R.; Hughes, J.B.; Shanks, J.V. [Rice Univ., Houston, TX (United States)

    1996-12-31

    Widespread contamination by 2,4,6-trinitrotoluene (TNT) of Soil exists at former munitions production and handling facilities. Phytoremediation may be an effective alternative to existing methods of TNT remediation: incineration is highly expensive and recalcitrant reduction products are formed in composting. Recently, the intrinsic ability of plants to transform TNT has been demonstrated using hairy root cultures of Catharanthus roseus as a model system. Kinetic studies were performed at concentrations of 30 and 50 mg/L TNT in growth medium. The pseudo-first order rate constants for disappearance ranged from 0.0103 to 0.0161 (L/g-day); TNT disappears completely within seven to ten days of exposure. The fate of the TNT molecule in plants is also currently under study, mass balance studies were performed with 1-{sup 14}C TNT. After a seven day exposure period, 72% of the label was associated with the roots and 30% was associated with the medium. However, HPLC analysis shows that less than 5% (wt%) of the TNT added is recoverable from both the plants and the media in the form of reduction products. 11 refs., 2 figs.

  3. Root interactions in a maize/soybean intercropping system control soybean soil-borne disease, red crown rot.

    Directory of Open Access Journals (Sweden)

    Xiang Gao

    Full Text Available BACKGROUND: Within-field multiple crop species intercropping is well documented and used for disease control, but the underlying mechanisms are still unclear. As roots are the primary organ for perceiving signals in the soil from neighboring plants, root behavior may play an important role in soil-borne disease control. PRINCIPAL FINDINGS: In two years of field experiments, maize/soybean intercropping suppressed the occurrence of soybean red crown rot, a severe soil-borne disease caused by Cylindrocladium parasiticum (C. parasiticum. The suppressive effects decreased with increasing distance between intercropped plants under both low P and high P supply, suggesting that root interactions play a significant role independent of nutrient status. Further detailed quantitative studies revealed that the diversity and intensity of root interactions altered the expression of important soybean PR genes, as well as, the activity of corresponding enzymes in both P treatments. Furthermore, 5 phenolic acids were detected in root exudates of maize/soybean intercropped plants. Among these phenolic acids, cinnamic acid was released in significantly greater concentrations when intercropped maize with soybean compared to either crop grown in monoculture, and this spike in cinnamic acid was found dramatically constrain C. parasiticum growth in vitro. CONCLUSIONS: To the best of our knowledge, this study is the first report to demonstrate that intercropping with maize can promote resistance in soybean to red crown rot in a root-dependent manner. This supports the point that intercropping may be an efficient ecological strategy to control soil-borne plant disease and should be incorporated in sustainable agricultural management practices.

  4. The role of maize root size in phosphorus uptake and productivity of maize/faba bean and maize/wheat intercropping systems.

    Science.gov (United States)

    Zhang, Yikai; Chen, Fanjun; Li, Long; Chen, Yanhua; Liu, Bingran; Zhou, Yuling; Yuan, Lixing; Zhang, Fusuo; Mi, Guohua

    2012-11-01

    Interspecific root/rhizosphere interactions affect phosphorus (P) uptake and the productivity of maize/faba bean and maize/wheat intercropping systems. The aim of these experiments was to determine whether manipulation of maize root growth could improve the productivity of the two intercropping systems. Two near isogenic maize hybrids (the larger-rooted T149 and smaller-rooted T222) were intercropped with faba bean and wheat, under conditions of high- and low-P availability. The larger-rooted T149 showed greater competitive ability than the smaller-rooted T222 in both maize/faba bean and maize/wheat intercropping systems. The higher competitive ability of T149 improved the productivity of the maize/faba bean intercropping system in P-sufficient conditions. In maize/wheat intercropping systems, root growth, shoot biomass, and P uptake of maize were inhibited by wheat, regardless of the P-supply. Compared with T222, the larger-rooted T149 suffered less in the intercropping systems. The total biomass of the maize/wheat intercropping system was higher for wheat/T149 than for wheat/T222 under low-P conditions. These data suggested that genetic improvement of maize root size could enhance maize growth and its ability to compete for P resources in maize/faba bean and maize/wheat intercropping systems. In addition, depending on the P availability, larger maize roots could increase the productivity of intercropping systems.

  5. Capturing Arabidopsis root architecture dynamics with ROOT-FIT reveals diversity in responses to salinity.

    Science.gov (United States)

    Julkowska, Magdalena M; Hoefsloot, Huub C J; Mol, Selena; Feron, Richard; de Boer, Gert-Jan; Haring, Michel A; Testerink, Christa

    2014-11-01

    The plant root is the first organ to encounter salinity stress, but the effect of salinity on root system architecture (RSA) remains elusive. Both the reduction in main root (MR) elongation and the redistribution of the root mass between MRs and lateral roots (LRs) are likely to play crucial roles in water extraction efficiency and ion exclusion. To establish which RSA parameters are responsive to salt stress, we performed a detailed time course experiment in which Arabidopsis (Arabidopsis thaliana) seedlings were grown on agar plates under different salt stress conditions. We captured RSA dynamics with quadratic growth functions (root-fit) and summarized the salt-induced differences in RSA dynamics in three growth parameters: MR elongation, average LR elongation, and increase in number of LRs. In the ecotype Columbia-0 accession of Arabidopsis, salt stress affected MR elongation more severely than LR elongation and an increase in LRs, leading to a significantly altered RSA. By quantifying RSA dynamics of 31 different Arabidopsis accessions in control and mild salt stress conditions, different strategies for regulation of MR and LR meristems and root branching were revealed. Different RSA strategies partially correlated with natural variation in abscisic acid sensitivity and different Na(+)/K(+) ratios in shoots of seedlings grown under mild salt stress. Applying root-fit to describe the dynamics of RSA allowed us to uncover the natural diversity in root morphology and cluster it into four response types that otherwise would have been overlooked.

  6. Bacteria with Phosphate Solubilizing Capacity Alter Mycorrhizal Fungal Growth Both Inside and Outside the Root and in the Presence of Native Microbial Communities.

    Directory of Open Access Journals (Sweden)

    Yuli Marcela Ordoñez

    Full Text Available Arbuscular mycorrhizal fungi (AMF and phosphate solubilizing Pseudomonas bacteria (PSB could potentially interact synergistically because PSB solubilize phosphate into a form that AMF can absorb and transport to the plant. However, very little is known about the interactions between these two groups of microorganisms and how they influence the growth of each other. We tested whether different strains of bacteria, that have the capacity to solubilize phosphate, are able to grow along AMF hyphae and differentially influence the growth of AMF both outside the roots of carrot in in vitro conditions and inside the roots of potato in the presence of a microbial community. We found strong effects of AMF on the growth of the different bacterial strains. Different bacterial strains also had very strong effects on the growth of AMF extraradical hyphae outside the roots of carrot and on colonization of potato roots by AMF. The differential effects on colonization occurred in the presence of a microbial community. Our results show that these two important groups of rhizosphere microorganisms indeed interact with each other. Such interactions could potentially lead to synergistic effects between the two groups but this could depend on whether the bacteria truly solubilize phosphate in the rhizosphere in the presence of microbial communities.

  7. Bacillus simplex—A Little Known PGPB with Anti-Fungal Activity—Alters Pea Legume Root Architecture and Nodule Morphology When Coinoculated with Rhizobium leguminosarum bv. viciae

    Directory of Open Access Journals (Sweden)

    Ann M. Hirsch

    2013-09-01

    Full Text Available Two strains, 30N-5 and 30VD-1, identified as Bacillus simplex and B. subtilis, were isolated from the rhizospheres of two different plants, a Podocarpus and a palm, respectively, growing in the University of California, Los Angeles (UCLA Mildred E. Mathias Botanical Garden. B. subtilis is a well-known plant-growth promoting bacterial species, but B. simplex is not. B. simplex 30N-5 was initially isolated on a nitrogen-free medium, but no evidence for nitrogen fixation was found. Nevertheless, pea plants inoculated with B. simplex showed a change in root architecture due to the emergence of more lateral roots. When Pisum sativum carrying a DR5::GUSA construct, an indicator for auxin response, was inoculated with either B. simplex 30N-5 or its symbiont Rhizobium leguminosarum bv. viciae 128C53, GUS expression in the roots was increased over the uninoculated controls. Moreover, when pea roots were coinoculated with either B. simplex 30N-5 or B. subtilis 30VD-1 and R. leguminosarum bv. viciae 128C53, the nodules were larger, clustered, and developed more highly branched vascular bundles. Besides producing siderophores and solubilizing phosphate, the two Bacillus spp., especially strain 30VD-1, exhibited anti-fungal activity towards Fusarium. Our data show that combining nodulating, nitrogen-fixing rhizobia with growth-promoting bacteria enhances plant development and strongly supports a coinoculation strategy to improve nitrogen fixation, increase biomass, and establish greater resistance to fungal disease.

  8. The distribution and growth of roots for four sugarcane cultivars irrigated by a subsurface drip irrigation system

    Science.gov (United States)

    Yukitaka Pessinatti Ohashi, Augusto; Barros de Oliveira Silva, André Luiz; Célia de Matos Pires, Regina; Vasconcelos Ribeiro, Rafael

    2013-04-01

    The use of subsurface drip irrigation (SDI) in sugarcane cultivation is an interesting cultural practice to improve production and allow cultivation in marginal lands due to water deficit conditions or to reach high yield and to increase longevity of plants. The SDI allows improving the water use efficiency, due to the application of water and nutrients in the root zone plants. It is necessary knowledge of soil and plant parameters, such as root system to improve irrigation system use efficiency. However, despite of the agronomic importance, few studies of sugarcane roots have been performed. The use of root scanner is an alternative to the evaluation of the root system. The mentioned equipment enables the continuous study of the roots throughout the cycle and for many years, but data about the use of this method for sugarcane are scarce. The aim of this study was to determine the distribution and growth of roots for four sugarcane cultivars root system. The field experiment was carried out in Campinas SP Brazil, with IACSP95-5000, IACSP94-2094, IACSP94-2101 and SP79-1011 cultivars. The irrigation was performed by subsurface drip system and the soil moisture was monitored by capacitance probes. Three access tubes with 1.05 m-length were used for each cultivar. The images were caught with Root Scanner CI-600™ in two dates, 38 and 58 days after harvest (DAH) of cane-plant, in the second cycle (1st cane ratoon) in five depths and were analyzed by the software RootSnap! ™. The results show that, except for cultivar IACSP94-2094, more than 80% of root length was found in the first 0.40 m of soil profile. Until 38 DAH the root growth of cultivar IACSP94-2101 were approximately fourfold higher than other three ones in the 0 to 0.20 m layer, sevenfold higher to 0.20 to 0.40 m layer and threefold to 0.40 to 0.60 m soil profile layer. However, between 38 and 58 DAH the cultivar SP79-1011 presented higher growth taxes, being almost twofold higher than IACSP94-2101 at 0 to

  9. Root inoculation with Pseudomonas putida KT2440 induces transcriptional and metabolic changes and systemic resistance in maize plants

    Directory of Open Access Journals (Sweden)

    Chantal ePlanchamp

    2015-01-01

    Full Text Available Pseudomonas putida KT2440 (KT2440 rhizobacteria colonize a wide range of plants. They have been extensively studied for their capacity to adhere to maize seeds, to tolerate toxic secondary metabolites produced by maize roots and to be attracted by maize roots. However, the response of maize plants to KT2440 colonization has not been investigated yet. Maize roots were inoculated with KT2440 and the local (roots and systemic (leaves early plant responses were investigated. The colonization behavior of KT2440 following application to maize seedlings was investigated and transcriptional analysis of stress- and defense-related genes as well as metabolite profiling of local and systemic maize tissues of KT2440-inoculated were performed. The local and systemic responses differed and more pronounced changes were observed in roots compared to leaves. Early in the interaction roots responded via jasmonic acid- and abscisic acid-dependent signaling. Interestingly, during later steps, the salicylic acid pathway was suppressed. Metabolite profiling revealed the importance of plant phospholipids in KT2440-maize interactions. An additional important maize secondary metabolite, a form of benzoxazinone, was also found to be differently abundant in roots three days after KT2440 inoculation. However, the transcriptional and metabolic changes observed in bacterized plants early during the interaction were minor and became even less pronounced with time, indicating an accommodation state of the plant to the presence of KT2440. Since the maize plants reacted to the presence of KT2440 in the rhizosphere, we also investigated the ability of these bacteria to trigger induced systemic resistance (ISR against the maize anthracnose fungus Colletotrichum graminicola. The observed resistance was expressed as strongly reduced leaf necrosis and fungal development in infected bacterized plants compared to non-bacterized controls, showing the potential of KT2440 to act as

  10. Root inoculation with Pseudomonas putida KT2440 induces transcriptional and metabolic changes and systemic resistance in maize plants.

    Science.gov (United States)

    Planchamp, Chantal; Glauser, Gaetan; Mauch-Mani, Brigitte

    2014-01-01

    Pseudomonas putida KT2440 (KT2440) rhizobacteria colonize a wide range of plants. They have been extensively studied for their capacity to adhere to maize seeds, to tolerate toxic secondary metabolites produced by maize roots and to be attracted by maize roots. However, the response of maize plants to KT2440 colonization has not been investigated yet. Maize roots were inoculated with KT2440 and the local (roots) and systemic (leaves) early plant responses were investigated. The colonization behavior of KT2440 following application to maize seedlings was investigated and transcriptional analysis of stress- and defense-related genes as well as metabolite profiling of local and systemic maize tissues of KT2440-inoculated were performed. The local and systemic responses differed and more pronounced changes were observed in roots compared to leaves. Early in the interaction roots responded via jasmonic acid- and abscisic acid-dependent signaling. Interestingly, during later steps, the salicylic acid pathway was suppressed. Metabolite profiling revealed the importance of plant phospholipids in KT2440-maize interactions. An additional important maize secondary metabolite, a form of benzoxazinone, was also found to be differently abundant in roots 3 days after KT2440 inoculation. However, the transcriptional and metabolic changes observed in bacterized plants early during the interaction were minor and became even less pronounced with time, indicating an accommodation state of the plant to the presence of KT2440. Since the maize plants reacted to the presence of KT2440 in the rhizosphere, we also investigated the ability of these bacteria to trigger induced systemic resistance (ISR) against the maize anthracnose fungus Colletotrichum graminicola. The observed resistance was expressed as strongly reduced leaf necrosis and fungal growth in infected bacterized plants compared to non-bacterized controls, showing the potential of KT2440 to act as resistance inducers.

  11. Variations in the mycorrhization characteristics in roots of wild-type and ABA-deficient tomato are accompanied by specific transcriptomic alterations.

    Science.gov (United States)

    Garrido, José Manuel García; Morcillo, Rafael Jorge León; Rodríguez, José Angel Martín; Bote, Juan Antonio Ocampo

    2010-05-01

    Abscissic acid (ABA) determines mycorrhiza functionality and arbuscule development. In this study, we performed transcriptome analysis in response to different mycorrhization status according to the ABA content in the root to identify genes that may play a role in arbuscule functionality. Affymetrix Tomato GeneChip (approximately 10,000 probes) allowed us to detect and compare the transcriptional root profiling of tomato (Solanum lycopersicum) wild-type and ABA-deficient sitiens plants colonized by Glomus intraradices. A number of identified genes in tomato belong to a category of genes already described as "mycorrhizal core-set" in other host plants. The impairment in arbuscular mycorrhiza (AM) formation in ABA-deficient mutants was associated with upregulation of genes related to defense and cell wall modification, whereas functional mycorrhization in wild-type plants was associated with activation of genes related to isoprenoid metabolism. The oxylipin pathway was activated in tomato mycorrhizal roots at late stages of interaction, and was related to the control of fungal spread in roots, not with the establishment of the symbiosis. Induction of selected genes, representing a range of biological functions and representative of the three sets of genes specifically upregulated in the different plant phenotype, was confirmed by quantitative reverse-transcription polymerase chain reaction, and their response to phythohormone treatment was tested, showing that ethylene and jasmonic acid are key regulators of gene expression during AM development. Comparative analysis of mycorrhiza upregulated functional categories revealed significant changes in gene expression associated with the different mycorrhization status according to the ABA content in the roots.

  12. Advanced nutrient root feeding system for conveyer-type cylindrical plant growth facilities developed for microgravity

    Science.gov (United States)

    Berkovich, Yuliy A.; Smolyanina, Svetlana O.; Krivobok, Anna; Krivobok, Nikolay

    A new brand of cylindrical conveyer-type space plant growth facilities (PGF) has been created to improve of cosmonauts’ diet in the microgravity conditions. Up to date several ground prototypes of the space PGF have been made and tested: “Phytocycle”, “Vitacycle”, “Phytocycle-LED”, “Phytoconveyer”; now the space PGF “Vitacycle-T” for the Russian segment of the ISS is under developing. In the PGFs the ion-exchange salt-saturated fibrous artificial soil (AS) is used as a root medium. We have proposed the system for enrichment of irrigation water by nutrients to decrease of the AS store required for PGF working during the long space mission. The system includes root modules filled in fibrous ion-exchange AS, the enrichment column with crumble salt-saturation ion-exchange resin and the cassette with slow releasing fertilizer (SRF). Both substrates (ion-exchange resin and SRF) are necessary because of the SRF contains mostly N, P and K but another three essential elements S, Ca, Mg are provided by the ion-exchange resin. In the system water goes throw the enrichment column with ion-exchange resin fertilizing by the nutrients and comes into the mixer cell fertilize equipped with the electrical conductivity sensor. When the signal of the conductivity sensor is coming to the controller it turns on the pump directed the water flow throw the cassette with SRF until the electric conductivity of the solution in the mixer cell will reach the setpoint. The nutrient root feeding system was tested during 88 days when Chinese cabbage grew in PGF “Phytocycle-LED”. The crop has been continuously illuminated by red and blue LEDs in the PPF ratio 7 to 1; an integral PPF level has been (240 ± 10) µmol/(m2×s). There was no renewal of the used fibrous AS during the experiment. The PGF total electric power consumption was of 0,45 kW. The average fresh biomass productivity of the PGF during steady state working mode was equal 135×g/day per m2 of the illuminated

  13. A Palaeoproterozoic multi-stage hydrothermal alteration system at Nalunaq gold deposit, South Greenland

    Science.gov (United States)

    Bell, Robin-Marie; Kolb, Jochen; Waight, Tod Earle; Bagas, Leon; Thomsen, Tonny B.

    2017-03-01

    Nalunaq is an orogenic, high gold grade deposit situated on the Nanortalik Peninsula, South Greenland. Mineralisation is hosted in shear zone-controlled quartz veins, located in fine- and medium-grained amphibolite. The deposit was the site of Greenland's only operating metalliferous mine until its closure in 2014, having produced 10.67 t of gold. This study uses a combination of field investigation, petrography and U/Pb zircon and titanite geochronology to define a multi-stage hydrothermal alteration system at Nalunaq. A clinopyroxene-plagioclase-garnet(-sulphide) alteration zone (CPGZ) developed in the Nanortalik Peninsula, close to regional peak metamorphism and prior to gold-quartz vein formation. The ca. 1783-1762-Ma gold-quartz veins are hosted in reactivated shear zones with a hydrothermal alteration halo of biotite-arsenopyrite-sericite-actinolite-pyrrhotite(-chlorite-plagioclase-löllingite-tourmaline-titanite), which is best developed in areas of exceptionally high gold grades. Aplite dykes dated to ca. 1762 Ma cross-cut the gold-quartz veins, providing a minimum age for mineralisation. A hydrothermal calcite-titanite alteration assemblage is dated to ca. 1766 Ma; however, this alteration is highly isolated, and as a result, its field relationships are poorly constrained. The hydrothermal alteration and mineralisation is cut by several generations of ca. 1745-Ma biotite granodiorite accompanied by brittle deformation. A ca. 1745-Ma lower greenschist facies hydrothermal epidote-calcite-zoisite alteration assemblage with numerous accessory minerals forms halos surrounding the late-stage fractures. The contrasting hydrothermal alteration styles at Nalunaq indicate a complex history of exhumation from amphibolite facies conditions to lower greenschist facies conditions in an orogenic belt which resembles modern Phanerozoic orogens.

  14. A Palaeoproterozoic multi-stage hydrothermal alteration system at Nalunaq gold deposit, South Greenland

    Science.gov (United States)

    Bell, Robin-Marie; Kolb, Jochen; Waight, Tod Earle; Bagas, Leon; Thomsen, Tonny B.

    2016-07-01

    Nalunaq is an orogenic, high gold grade deposit situated on the Nanortalik Peninsula, South Greenland. Mineralisation is hosted in shear zone-controlled quartz veins, located in fine- and medium-grained amphibolite. The deposit was the site of Greenland's only operating metalliferous mine until its closure in 2014, having produced 10.67 t of gold. This study uses a combination of field investigation, petrography and U/Pb zircon and titanite geochronology to define a multi-stage hydrothermal alteration system at Nalunaq. A clinopyroxene-plagioclase-garnet(-sulphide) alteration zone (CPGZ) developed in the Nanortalik Peninsula, close to regional peak metamorphism and prior to gold-quartz vein formation. The ca. 1783-1762-Ma gold-quartz veins are hosted in reactivated shear zones with a hydrothermal alteration halo of biotite-arsenopyrite-sericite-actinolite-pyrrhotite(-chlorite-plagioclase-löllingite-tourmaline-titanite), which is best developed in areas of exceptionally high gold grades. Aplite dykes dated to ca. 1762 Ma cross-cut the gold-quartz veins, providing a minimum age for mineralisation. A hydrothermal calcite-titanite alteration assemblage is dated to ca. 1766 Ma; however, this alteration is highly isolated, and as a result, its field relationships are poorly constrained. The hydrothermal alteration and mineralisation is cut by several generations of ca. 1745-Ma biotite granodiorite accompanied by brittle deformation. A ca. 1745-Ma lower greenschist facies hydrothermal epidote-calcite-zoisite alteration assemblage with numerous accessory minerals forms halos surrounding the late-stage fractures. The contrasting hydrothermal alteration styles at Nalunaq indicate a complex history of exhumation from amphibolite facies conditions to lower greenschist facies conditions in an orogenic belt which resembles modern Phanerozoic orogens.

  15. Eigenvalues of Ruijsenaars-Schneider models associated with $A_{n-1}$ root system in Bethe ansatz formalism

    CERN Document Server

    Hou, B; Yang, W L; Hou, Boyu; Sasaki, Ryu; Yang, Wen-Li

    2004-01-01

    Ruijsenaars-Schneider models associated with $A_{n-1}$ root system with a discrete coupling constant are studied. The eigenvalues of the Hamiltonian are givein in terms of the Bethe ansatz formulas. Taking the "non-relativistic" limit, we obtain the spectrum of the corresponding Calogero-Moser systems in the third formulas of Felder et al [20].

  16. Systemic factors effects on orthodontically induced inflammatory root resorption: A systematic literature review

    DEFF Research Database (Denmark)

    Haugland, Linn; Kristensen, Kasper Dahl; Vandevska-Radunovich, Vaska

    Aim: Systemic factors are shown to affect the degree of orthodontically induced inflammatory root resorption (OIIRR). However, a systematic overall assessment of their impact on OIIRR has not yet been reported. We aimed to systematically assess the risk of any intervention(s) that could induce...... decreased OIIIRR, however one study reported no effect. Most of the included articles stated that low-level laser therapy (LLLT) and Ultrasound therapy decreased OIIRR while two articles reported no effect. Regarding hormones and stress, recombinant human growth hormone (rHGH) and thyroxin (TH) decreased...... OIIRR, stress had no effect while ovariectomy (OVX) showed a marked increase. For the medications; lithium chloride (LiCl), calsium (Ca2), steroids (except for methylprednisolone), and especially bisphosphonates showed decreased OIIRR. Most NSAIDS showed no effect, except for one study that reported...

  17. System approaches to study root hairs as a single cell plant model: current status and future perspectives

    Directory of Open Access Journals (Sweden)

    Md Shakhawat eHossain

    2015-05-01

    Full Text Available Our current understanding of plant functional genomics derives primarily from measurements of gene, protein and/or metabolite levels averaged over the whole plant or multicellular tissues. These approaches risk diluting the response of specific cells that might respond strongly to the treatment but whose signal is diluted by the larger proportion of non-responding cells. For example, if a gene is expressed at a low level, does this mean that it is indeed lowly expressed or is it highly expressed, but only in a few cells? In order to avoid these issues, we adopted the soybean root hair cell, derived from a single, differentiated root epidermal cell, as a single-cell model for functional genomics. Root hair cells are intrinsically interesting since they are major conduits for root water and nutrient uptake and are also the preferred site of infection by nitrogen-fixing rhizobium bacteria. Although a variety of other approaches have been used to study single plant cells or single cell types, the root hair system is perhaps unique in allowing application of the full repertoire of functional genomic and biochemical approaches. In this mini review, we summarize our published work and place this within the broader context of root biology, with a significant focus on understanding the initial events in the soybean-rhizobium interaction.

  18. Fine root branch orders respond differentially to carbon source-sink manipulations in a longleaf pine forest.

    Science.gov (United States)

    Guo, Dali L; Mitchell, Robert J; Hendricks, Joseph J

    2004-08-01

    Fine roots are a key component of carbon (C) flow and nitrogen (N) cycling in forest ecosystems. However, the complexity and heterogeneity of the fine root branching system have hampered the assessment and prediction of C and N dynamics at ecosystem scales. We examined how root morphology, biomass, and chemistry differed with root branch orders (1-5 with root tips classified as first order roots) and how different root orders responded to increased C sink strength (via N fertilization) and reduced carbon source strength (via canopy scorching) in a longleaf pine (Pinus palustris L.) ecosystem. With increasing root order, the diameter and length of individual roots increased, whereas the specific root length decreased. Total root biomass on an areal basis was similar among the first four orders but increased for the fifth order roots. Consequently, total root length and total root surface area decreased systematically with increasing root order. Fine root N and lignin concentrations decreased, while total non-structural carbohydrate (TNC) and cellulose concentrations increased with increasing root order. N addition and canopy disturbance did not alter root morphology, but they did influence root chemistry. N fertilization increased fine root N concentration and content per unit area in all five orders, while canopy scorching decreased root N concentration. Moreover, TNC concentration and content in fifth order roots were also reduced by canopy scorching. Our results indicate that the small, fragile, and more easily overlooked first and second order roots may be disproportionately important in ecosystem scale C and N fluxes due to their large proportions of fine root biomass, high N concentrations, relatively short lifespans, and potentially high decomposition rates.

  19. CBCT Assessment of Root Dentine Removal by Gates-Glidden Drills and Two Engine-Driven Root Preparation Systems

    Science.gov (United States)

    Harandi, Azade; Mohammadpour Maleki, Fatemeh; Moudi, Ehsan; Ehsani, Maryam; Khafri, Soraya

    2017-01-01

    Introduction: The aim of this study was to compare the dentine removing efficacy of Gates-Glidden drills with hand files, ProTaper and OneShape single-instrument system using cone-beam computed tomography (CBCT). Methods and Materials: A total of 39 extracted bifurcated maxillary first premolars were divided into 3 groups (n=13) and were prepared using either Gates-Glidden drills and hand instruments, ProTaper and OneShape systems. Pre- and post-instrumentation CBCT images were obtained. The dentin thickness of canals was measured at furcation, and 1 and 2 mm from the furcation area in buccal, palatal, mesial and distal walls. Data were analyzed using one-way ANOVA test. Tukey’s post hoc tests were used for two-by-two comparisons. Results: Gates-Glidden drills with hand files removed significantly more (P0.05). Conclusion: The total cervical dentine removal during canal instrumentation was significantly less with engine-driven file systems compared to Gates-Glidden drills. There were no significant differences between residual dentine thicknesses left between the various canal walls. PMID:28179920

  20. Endodontic management of a mandibular first molar with six root canal systems

    Directory of Open Access Journals (Sweden)

    Dilip Jain

    2015-01-01

    Full Text Available Internal anatomy of pulp is complex. The first mandibular molars typically have two roots, one mesial with two root canals and another distal root, which contains one or two canals. A 20-year-old female patient reported with intermittent pain and incomplete root canal treatment in left lower back region since 1-week. Refined access cavity revealed initially two canals in mesial and two canals in the distal root. With operating microscope and cone beam computerized tomography, two additional canals (L-mesio-buccal and B-mesio-lingual were identified in mesial root. One-year follow-up showed patient was asymptomatic and complete healing of periapical radiolucency.

  1. Adhesive dentistry and endodontics. Part 2: bonding in the root canal system-the promise and the problems: a review.

    Science.gov (United States)

    Schwartz, Richard S

    2006-12-01

    One of the recent trends in endodontics has been the development of bonded obturating materials, in an effort to provide a more effective seal coronally and apically. Materials utilizing dentin adhesive technology have been borrowed from restorative dentistry and adapted to obturating materials. This review discusses the obstacles to effective bonding in the root canal system, the progress that has been made, and possible strategies for improved materials in the future. Much of the literature reviewed and many of the principles discussed are taken from the restorative dentistry literature and applied to the unique environment of the root canal system.

  2. The health and health system of South Africa: historical roots of current public health challenges.

    Science.gov (United States)

    Coovadia, Hoosen; Jewkes, Rachel; Barron, Peter; Sanders, David; McIntyre, Diane

    2009-09-01

    The roots of a dysfunctional health system and the collision of the epidemics of communicable and non-communicable diseases in South Africa can be found in policies from periods of the country's history, from colonial subjugation, apartheid dispossession, to the post-apartheid period. Racial and gender discrimination, the migrant labour system, the destruction of family life, vast income inequalities, and extreme violence have all formed part of South Africa's troubled past, and all have inexorably affected health and health services. In 1994, when apartheid ended, the health system faced massive challenges, many of which still persist. Macroeconomic policies, fostering growth rather than redistribution, contributed to the persistence of economic disparities between races despite a large expansion in social grants. The public health system has been transformed into an integrated, comprehensive national service, but failures in leadership and stewardship and weak management have led to inadequate implementation of what are often good policies. Pivotal facets of primary health care are not in place and there is a substantial human resources crisis facing the health sector. The HIV epidemic has contributed to and accelerated these challenges. All of these factors need to be addressed by the new government if health is to be improved and the Millennium Development Goals achieved in South Africa.

  3. Three-dimensional Solute Transport Modeling in Coupled Soil and Plant Root Systems

    OpenAIRE

    2014-01-01

    Many environmental and agricultural challenges rely on the proper understanding of water flow and solute transport in soils, for example the carbon cycle, crop growth, irrigation scheduling or fate of pollutants in subsoil. Current modeling approaches typically simulate plant uptake via empirical approaches, which neglect the three-dimensional (3D) root architecture. Yet, nowadays 3D soil-root water and solute models on plant-scale exist, which can be used for assessing the impact of root arc...

  4. Soybean root growth and crop yield in reponse to liming at the beginning of a no-tillage system

    Directory of Open Access Journals (Sweden)

    Edson Campanhola Bortoluzzi

    2014-02-01

    Full Text Available Analyzing the soil near crop roots may reveal limitations to growth and yield even in a no-tillage system. The purpose of the present study was to relate the chemical and physical properties of soil under a no-tillage system to soybean root growth and plant yield after five years of use of different types of limestone and forms of application. A clayey Oxisol received application of dolomitic and calcitic limestones and their 1:1 combination in two forms: surface application, maintained on the soil surface; and incorporated, applied on the surface and incorporated mechanically. Soil physical properties (resistance to mechanical penetration, soil bulk density and soil aggregation, soil chemical properties (pH, exchangeable cations, H+Al, and cation exchange capacity and plant parameters (root growth system, soybean grain yield, and oat dry matter production were evaluated five years after setting up the experiment. Incorporation of lime neutralized exchangeable Al up to a depth of 20 cm without affecting the soil physical properties. The soybean root system reached depths of 40 cm or more with incorporated limestone, increasing grain yield an average of 31 % in relation to surface application, which limited the effect of lime up to a depth of 5 cm and root growth up to 20 cm. It was concluded that incorporation of limestone at the beginning of a no-tillage system ensures a favorable environment for root growth and soybean yield, while this intervention does not show long-term effects on soil physical properties under no-tillage. This suggests that there is resilience in the physical properties evaluated.

  5. Robust root clustering for linear uncertain systems using generalized Lyapunov theory

    Science.gov (United States)

    Yedavalli, R. K.

    1993-01-01

    Consideration is given to the problem of matrix root clustering in subregions of a complex plane for linear state space models with real parameter uncertainty. The nominal matrix root clustering theory of Gutman & Jury (1981) using the generalized Liapunov equation is extended to the perturbed matrix case, and bounds are derived on the perturbation to maintain root clustering inside a given region. The theory makes it possible to obtain an explicit relationship between the parameters of the root clustering region and the uncertainty range of the parameter space.

  6. Impact of salt stress on the features and activities of root system for three desert halophyte species in their seedling stage

    Institute of Scientific and Technical Information of China (English)

    YI LiangPeng; MA Jian; LI Yan

    2007-01-01

    Linkage between belowground and aboveground sections of ecological system is mainly depending on root system. But root system is the parts of plant that people less understand. The absorption function of root system is closely related to their morphology and activity. Moreover root system can interact with the environmental stress under the adverse situation, and adjust its system to take adaptation responses in morphology and physiology to strengthen its survival chance. This research is focused on three desert halophyte species of H. ammodendron (C.A.Mey.) Bge., S. physophora Pall., and S.nitraria Pall. under solution culture, to study the differences of their root system morphology and activity in the seedling stage under varying salt concentration conditions. The study results show that: A certain salt concentration can promote development of these three halophytes; but rather high salt concentration will restrain their growth, in particular inhibit the root system development. Under the same salt concentration condition, S. nitraria Pall. grows fast and accumulates the largest amount of biomass. Under relatively low salt concentration, the length of axial root and the total length of root system of these three halophyte species are all increased; and compared to the checking samples, S.physophora Pall. occupies the top place of root system growth, but the high salt concentration will restrain the increase of total root length; among them, the impact intensity on S. physophora Pall. is lighter than to H. ammodendron (C.A.Mey.) Bge. and S. nitraria Pall. is lighter; the salinity does not bring distinct influence on the average diameter of root system of these three plant species, but trends to reducing the size; under the solution culture conditions, the middle and lower parts of the axial root of H. ammodendron (C.A.Mey.) Bge. and S. physophora Pall. are rather equally distributed, but the central zone of S. nitraria Pall. root system is more significantly

  7. Systemic defense priming by Pseudomonas putida KT2440 in maize depends on benzoxazinoid exudation from the roots.

    Science.gov (United States)

    Neal, Andrew L; Ton, Jurriaan

    2013-01-01

    Exudation of benzoxazinoid metabolites from roots of young maize seedlings recruits the rhizobacterial strain Pseudomonas putida KT2440 from the soil to the rhizosphere. In this study, we have investigated whether these rhizobacteria are beneficial for maize by eliciting systemic defense priming. Root colonization of the maize hybrid cultivar Delprim by P. putida primed wound- and jasmonic acid (JA)-inducible emission of aromatic and terpenoid volatiles, but not the emission of the green leaf volatile (Z)-3-hexenyl acetate. Furthermore, root colonization by P. putida primed stress-inducible transcription of the JA-dependent gene SerPIN, whereas JA-dependent induction of the MPI gene was unaffected. Systemic priming of SerPIN by P. putida only occurred in benzoxazinoid-producing plants, and was absent in benzoxazinoid-deficient plants. The results from this study suggest that root colonization by P. putida primes a selection of JA-dependent defenses in Maize, which is reliant on benzoxazinoid exudation from the roots.

  8. 75 FR 25904 - Privacy Act of 1974; as Amended; Proposed Alteration to an Existing Privacy Act System of Records...

    Science.gov (United States)

    2010-05-10

    ... THE SYSTEM: This system covers persons who allegedly fail to meet our qualifications to serve as a... ADMINISTRATION Privacy Act of 1974; as Amended; Proposed Alteration to an Existing Privacy Act System of Records, Housekeeping Changes, and New Routine Uses AGENCY: Social Security Administration (SSA). ACTION: Altered...

  9. Automatic measurement of water uptake and weeping sap excretion by root system

    Directory of Open Access Journals (Sweden)

    J. Czerski

    2015-01-01

    Full Text Available An apparatus is described which allows continuous recording of water uptake by a plant. The elements of this apparatus serve at the same time for measurement of root pressure. The size of the recorded portion of uptaken water and of weeping sap excreted by the plant root can be regulated.

  10. Enhancement of anti-inflammatory activity of Aloe vera adventitious root extracts through the alteration of primary and secondary metabolites via salicylic acid elicitation.

    Directory of Open Access Journals (Sweden)

    Yun Sun Lee

    Full Text Available Aloe vera (Asphodeloideae is a medicinal plant in which useful secondary metabolites are plentiful. Among the representative secondary metabolites of Aloe vera are the anthraquinones including aloe emodin and chrysophanol, which are tricyclic aromatic quinones synthesized via a plant-specific type III polyketide biosynthesis pathway. However, it is not yet clear which cellular responses can induce the pathway, leading to production of tricyclic aromatic quinones. In this study, we examined the effect of endogenous elicitors on the type III polyketide biosynthesis pathway and identified the metabolic changes induced in elicitor-treated Aloe vera adventitious roots. Salicylic acid, methyl jasmonate, and ethephon were used to treat Aloe vera adventitious roots cultured on MS liquid media with 0.3 mg/L IBA for 35 days. Aloe emodin and chrysophanol were remarkably increased by the SA treatment, more than 10-11 and 5-13 fold as compared with untreated control, respectively. Ultra-performance liquid chromatography-electrospray ionization mass spectrometry analysis identified a total of 37 SA-induced compounds, including aloe emodin and chrysophanol, and 3 of the compounds were tentatively identified as tricyclic aromatic quinones. Transcript accumulation analysis of polyketide synthase genes and gas chromatography mass spectrometry showed that these secondary metabolic changes resulted from increased expression of octaketide synthase genes and decreases in malonyl-CoA, which is the precursor for the tricyclic aromatic quinone biosynthesis pathway. In addition, anti-inflammatory activity was enhanced in extracts of SA-treated adventitious roots. Our results suggest that SA has an important role in activation of the plant specific-type III polyketide biosynthetic pathway, and therefore that the efficacy of Aloe vera as medicinal agent can be improved through SA treatment.

  11. Enhancement of anti-inflammatory activity of Aloe vera adventitious root extracts through the alteration of primary and secondary metabolites via salicylic acid elicitation.

    Science.gov (United States)

    Lee, Yun Sun; Ju, Hyun Kyoung; Kim, Yeon Jeong; Lim, Tae-Gyu; Uddin, Md Romij; Kim, Yeon Bok; Baek, Jin Hong; Kwon, Sung Won; Lee, Ki Won; Seo, Hak Soo; Park, Sang Un; Yang, Tae-Jin

    2013-01-01

    Aloe vera (Asphodeloideae) is a medicinal plant in which useful secondary metabolites are plentiful. Among the representative secondary metabolites of Aloe vera are the anthraquinones including aloe emodin and chrysophanol, which are tricyclic aromatic quinones synthesized via a plant-specific type III polyketide biosynthesis pathway. However, it is not yet clear which cellular responses can induce the pathway, leading to production of tricyclic aromatic quinones. In this study, we examined the effect of endogenous elicitors on the type III polyketide biosynthesis pathway and identified the metabolic changes induced in elicitor-treated Aloe vera adventitious roots. Salicylic acid, methyl jasmonate, and ethephon were used to treat Aloe vera adventitious roots cultured on MS liquid media with 0.3 mg/L IBA for 35 days. Aloe emodin and chrysophanol were remarkably increased by the SA treatment, more than 10-11 and 5-13 fold as compared with untreated control, respectively. Ultra-performance liquid chromatography-electrospray ionization mass spectrometry analysis identified a total of 37 SA-induced compounds, including aloe emodin and chrysophanol, and 3 of the compounds were tentatively identified as tricyclic aromatic quinones. Transcript accumulation analysis of polyketide synthase genes and gas chromatography mass spectrometry showed that these secondary metabolic changes resulted from increased expression of octaketide synthase genes and decreases in malonyl-CoA, which is the precursor for the tricyclic aromatic quinone biosynthesis pathway. In addition, anti-inflammatory activity was enhanced in extracts of SA-treated adventitious roots. Our results suggest that SA has an important role in activation of the plant specific-type III polyketide biosynthetic pathway, and therefore that the efficacy of Aloe vera as medicinal agent can be improved through SA treatment.

  12. Ambient ultraviolet radiation in the Arctic reduces root biomass and alters microbial community composition but has no effects on microbial biomass

    DEFF Research Database (Denmark)

    Rinnan, R.; Keinänen, M.M.; Kasurinen, A.

    2005-01-01

    that microbial community composition was altered by UV reduction. Although the UV responses were slight considering the large dose difference between the treatments (from near-ambient to up to 90% UV-B reduction), we cannot rule out the possibility that the recovery of ozone layer would change the below...

  13. Impact of DNA mismatch repair system alterations on human fertility and related treatments.

    Science.gov (United States)

    Hu, Min-hao; Liu, Shu-yuan; Wang, Ning; Wu, Yan; Jin, Fan

    2016-01-01

    DNA mismatch repair (MMR) is one of the biological pathways, which plays a critical role in DNA homeostasis, primarily by repairing base-pair mismatches and insertion/deletion loops that occur during DNA replication. MMR also takes part in other metabolic pathways and regulates cell cycle arrest. Defects in MMR are associated with genomic instability, predisposition to certain types of cancers and resistance to certain therapeutic drugs. Moreover, genetic and epigenetic alterations in the MMR system demonstrate a significant relationship with human fertility and related treatments, which helps us to understand the etiology and susceptibility of human infertility. Alterations in the MMR system may also influence the health of offspring conceived by assisted reproductive technology in humans. However, further studies are needed to explore the specific mechanisms by which the MMR system may affect human infertility. This review addresses the physiological mechanisms of the MMR system and associations between alterations of the MMR system and human fertility and related treatments, and potential effects on the next generation.

  14. Conformity of the time and root characteristics received at modeling of linear systems in the environment of MATLAB

    Directory of Open Access Journals (Sweden)

    Vitaliy Borodenko

    2009-10-01

    Full Text Available The author analyses conformity of the time and root characteristics received at modeling of linear systems in the environment of MATLAB, to each other and to the standard approach. The author studies conditions of reception of false or inexact results at the analysis of regulation quality on the transition characteristic.

  15. On the completeness of eigen and root vector systems for fourth-order operator matrices and their applications

    Institute of Scientific and Technical Information of China (English)

    Wang Hua; Alatancang; Huang Jun-Jie

    2011-01-01

    In this paper,we consider the eigenvalue problem of a class of fourth-order operator matrices appearing in mechanics,including the geometric multiplicity,algebraic index,and algebraic multiplicity of the eigenvalue,the symplectic orthogonality,and completeness of eigen and root vector systems.The obtained results are applied to the plate bending problem.

  16. Genetic association among root morphology, root quality and root yield in ashwagandha (Withania somnifera

    Directory of Open Access Journals (Sweden)

    Kumar Ramesh R.

    2011-01-01

    Full Text Available Ashwagandha (Withania somnifera is a dryland medicinal crop and roots are used as valuable drug in traditional systems of medicine. Morphological variants (morphotypes and the parental populations were evaluated for root - morphometric, quality and yield traits to study genetic association among them. Root morphometric traits (root length, root diameter, number of secondary roots/ plant and crude fiber content exhibited strong association among them and showed significant positive genotypic correlation with yield. Starch-fiber ratio (SFR, determinant of brittle root texture showed strong negative association with root yield. The total alkaloid content had positive genotypic correlation with root yield. So genetic upgradation should aim at optimum balance between two divergent groups of traits i.e. root yield traits (root morphometric traits and crude fiber content and root textural quality traits (starch content and SFR to develop superior genotypes with better yield and quality.

  17. How changing root system architecture can help tackle a reduction in soil phosphate (P) levels for better plant P acquisition

    KAUST Repository

    HEPPELL, J.

    2014-06-24

    © 2014 John Wiley & Sons Ltd. The readily available global rock phosphate (P) reserves may run out within the next 50-130 years, causing soils to have a reduced P concentration which will affect plant P uptake. Using a combination of mathematical modelling and experimental data, we investigated potential plant-based options for optimizing crop P uptake in reduced soil P environments. By varying the P concentration within a well-mixed agricultural soil, for high and low P (35.5-12.5mgL-1 respectively using Olsen\\'s P index), we investigated branching distributions within a wheat root system that maximize P uptake. Changing the root branching distribution from linear (evenly spaced branches) to strongly exponential (a greater number of branches at the top of the soil) improves P uptake by 142% for low-P soils when root mass is kept constant between simulations. This causes the roots to emerge earlier and mimics topsoil foraging. Manipulating root branching patterns, to maximize P uptake, is not enough on its own to overcome the drop in soil P from high to low P. Further mechanisms have to be considered to fully understand the impact of P reduction on plant development.

  18. Robust fault diagnosis for non-Gaussian stochastic systems based on the rational square-root approximation model

    Institute of Scientific and Technical Information of China (English)

    YAO LiNa; WANG Hong

    2008-01-01

    The task of robust fault detection and diagnosis of stochastic distribution control (SDC) systems with uncertainties is to use the measured input and the system output PDFs to still obtain possible faults information of the system. Using the ra-tional square-root B-spline model to represent the dynamics between the output PDF and the input, in this paper, a robust nonlinear adaptive observer-based fault diagnosis algorithm is presented to diagnose the fault in the dynamic part of such systems with model uncertainties. When certain conditions are satisfied, the weight vector of the rational square-root B-spline model proves to be bounded. Conver-gency analysis is performed for the error dynamic system raised from robust fault detection and fault diagnosis phase. Computer simulations are given to demon-strate the effectiveness of the proposed algorithm.

  19. Volatiles on solar system objects: Carbon dioxide on Iapetus and aqueous alteration in CM chondrites

    Science.gov (United States)

    Palmer, Eric Edward

    2009-12-01

    Volatiles are critical in understanding the history of the solar system. We conducted two case studies intended to further this understanding. First, we analyzed the presence of CO2 on Iapetus. Second, we evaluated aqueous alteration in CM chondrites. We studied the distribution, stability and production of CO2 on Saturn's moon Iapetus. We determined that CO2 is concentrated exclusively on Iapetus' dark material with an effective thickness of 31 nm. The total CO2 on Iapetus' surface is 2.3x108 kg. However, CO2 should not be present because it has a limited residence time on the surface of Iapetus. Our thermal calculations and modeling show that CO2 in the form of frost will not remain on Iapetus' surface beyond a few hundred years. Thus, it must be complexed with dark material. However, photodissociation will destroy the observed inventory in ˜1/2 an Earth year. The lack of thermal and radiolytic stability requires an active source. We conducted experiments showing UV radiation generates CO2 under Iapetus-like conditions. We created a simulated regolith by mixing crushed water ice with isotopically labeled carbon. We then irradiated it with UV light at low temperature and pressure, producing 1.1x1015 parts m-2 s-1. Extrapolating to Iapetus, photolysis could generate 8.4x107 kg y-1, which makes photolytic production a good candidate for the source of the CO2 detected on Iapetus. We also studied the aqueous alteration of metal-bearing assemblages in CM chondrites. We examined Murchison, Cold Bokkeveld, Nogoya, and Murray using microscopy, electron microprobe analysis and scanning electron microscopy. Alteration on CM meteorites occurred within at least three microchemical environments: S-rich water, Si-rich water and water without substantial reactive components. Kamacite alters into tochilinite, cronstedtite, or magnetite. Sulfur associated alteration can form accessory minerals: P-rich sulfides, eskolaite and schreibersite. Additionally, we determined that there

  20. Impaired sense of smell and altered olfactory system in RAG-1-/- immunodeficient mice

    Directory of Open Access Journals (Sweden)

    Lorenza eRattazzi

    2015-09-01

    Full Text Available Immune deficiencies are often associated with a number of physical manifestations including loss of sense of smell and an increased level of anxiety. We have previously shown that T and B cell-deficient recombinase activating gene (RAG-1-/- knockout mice have an increased level of anxiety-like behavior and altered gene expression involved in olfaction. In this study, we expanded these findings by testing the structure and functional development of the olfactory system in RAG-1-/- mice. Our results show that these mice have a reduced engagement in different types of odors and this phenotype is associated with disorganized architecture of glomerular tissue and atrophy of the main olfactory epithelium. Most intriguingly this defect manifests specifically in adult age and is not due to impairment in the patterning of the olfactory neuron staining at the embryo stage. Together these findings provide a formerly unreported biological evidence for an altered function of the olfactory system in RAG-1-/- mice.

  1. Impaired sense of smell and altered olfactory system in RAG-1(-∕-) immunodeficient mice.

    Science.gov (United States)

    Rattazzi, Lorenza; Cariboni, Anna; Poojara, Ridhika; Shoenfeld, Yehuda; D'Acquisto, Fulvio

    2015-01-01

    Immune deficiencies are often associated with a number of physical manifestations including loss of sense of smell and an increased level of anxiety. We have previously shown that T and B cell-deficient recombinase activating gene (RAG-1)(-∕-) knockout mice have an increased level of anxiety-like behavior and altered gene expression involved in olfaction. In this study, we expanded these findings by testing the structure and functional development of the olfactory system in RAG-1 (-∕-) mice. Our results show that these mice have a reduced engagement in different types of odors and this phenotype is associated with disorganized architecture of glomerular tissue and atrophy of the main olfactory epithelium. Most intriguingly this defect manifests specifically in adult age and is not due to impairment in the patterning of the olfactory neuron staining at the embryo stage. Together these findings provide a formerly unreported biological evidence for an altered function of the olfactory system in RAG-1 (-∕-) mice.

  2. Accounting for sap flow from different parts of the root system improves the prediction of xylem ABA concentration in plants grown with heterogeneous soil moisture.

    Science.gov (United States)

    Dodd, Ian C; Egea, Gregorio; Davies, William J

    2008-01-01

    When soil moisture is heterogeneous, sap flow from, and ABA status of, different parts of the root system impact on leaf xylem ABA concentration ([X-ABA]leaf). The robustness of a model for predicting [X-ABA]leaf was assessed. 'Two root-one shoot' grafted sunflower (Helianthus annuus L.) plants received either deficit irrigation (DI, each root system received the same irrigation volumes) or partial rootzone drying (PRD, only one root system was watered and the other dried the soil). Irrespective of whether relative sap flow was assessed using sap flow sensors in vivo or by pressurization of de-topped roots, each root system contributed similarly to total sap flow during DI, while sap flow from roots in drying soil declined linearly with soil water potential (Psisoil) during PRD. Although Psisoil of the irrigated pot determined the threshold Psisoil at which sap flow from roots in drying soil decreased, the slope of this decrease was independent of the wet pot Psisoil. Irrespective of whether sap was collected from the wet or dry root system of PRD plants, or a DI plant, root xylem ABA concentration increased as Psisoil declined. The model, which weighted ABA contributions of each root system according to the sap flow from each, almost perfectly explained [X-ABA] immediately above the graft union. That the model overestimated measured [X-ABA]leaf may result from changes in [X-ABA] along the transport pathway or an artefact of collecting xylem sap from detached leaves. The implications of declining sap flow through partially dry roots during PRD for the control of stomatal behaviour and irrigation scheduling are discussed.

  3. Alterations of the Brain Reward System in Antipsychotic Naïve Schizophrenia Patients

    DEFF Research Database (Denmark)

    Nielsen, Mette Ødegaard; Rostrup, Egill; Wulff, Sanne;

    2012-01-01

    BACKGROUND: Various schizophrenic symptoms are suggested to be linked to a dysfunction of the brain reward system. Several studies have found alterations in the reward processing in patients with schizophrenia; however, most previous findings might be confounded by medication effects. METHODS...... as arousing events) into behavioral salience (events where a predicted reward requires performance) and valence anticipation (the anticipation of a monetarily significant outcome). Furthermore, the evaluation of monetary gain and loss was assessed. RESULTS: During reward anticipation, patients had...

  4. Induced systemic resistance against Botrytis cinerea by Micromonospora strains isolated from root nodules

    Directory of Open Access Journals (Sweden)

    Pilar eMartínez-Hidalgo

    2015-09-01

    Full Text Available Micromonospora is a Gram positive bacterium that can be isolated from nitrogen fixing nodules from healthy leguminous plants, where they could be beneficial to the plant. Their plant growth promoting activity in legume and non-legume plants has been previously demonstrated. The present study explores the ability of Micromonospora strains to control fungal pathogens and to stimulate plant immunity. Micromonospora strains isolated from surface sterilized nodules of alfalfa showed in vitro antifungal activity against several pathogenic fungi. Moreover, root inoculation of tomato plants with these Micromonospora strains effectively reduced leaf infection by the fungal pathogen Botrytis cinerea, despite spatial separation between both microorganisms. This induced systemic resistance, confirmed in different tomato cultivars, is long lasting. Gene expression analyses evidenced that Micromonospora stimulates the plant capacity to activate defense mechanisms upon pathogen attack. The defensive response of tomato plants inoculated with Micromonospora spp. differs from that of non-inoculated plants, showing a stronger induction of jasmonate-regulated defenses when the plant is challenged with a pathogen. The hypothesis of jasmonates playing a key role in this defense priming effect was confirmed using defense-impaired tomato mutants, since the JA-deficient line def1 was unable to display a long term induced resistance upon Micromonospora spp. inoculation.In conclusion, nodule isolated Micromonospora strains should be considered excellent candidates as biocontrol agents as they combine both direct antifungal activity against plant pathogens and the ability to prime plant immunity.

  5. Induced systemic resistance against Botrytis cinerea by Micromonospora strains isolated from root nodules.

    Science.gov (United States)

    Martínez-Hidalgo, Pilar; García, Juan M; Pozo, María J

    2015-01-01

    Micromonospora is a Gram positive bacterium that can be isolated from nitrogen fixing nodules from healthy leguminous plants, where they could be beneficial to the plant. Their plant growth promoting activity in legume and non-legume plants has been previously demonstrated. The present study explores the ability of Micromonospora strains to control fungal pathogens and to stimulate plant immunity. Micromonospora strains isolated from surface sterilized nodules of alfalfa showed in vitro antifungal activity against several pathogenic fungi. Moreover, root inoculation of tomato plants with these Micromonospora strains effectively reduced leaf infection by the fungal pathogen Botrytis cinerea, despite spatial separation between both microorganisms. This induced systemic resistance, confirmed in different tomato cultivars, is long lasting. Gene expression analyses evidenced that Micromonospora stimulates the plant capacity to activate defense mechanisms upon pathogen attack. The defensive response of tomato plants inoculated with Micromonospora spp. differs from that of non-inoculated plants, showing a stronger induction of jasmonate-regulated defenses when the plant is challenged with a pathogen. The hypothesis of jasmonates playing a key role in this defense priming effect was confirmed using defense-impaired tomato mutants, since the JA-deficient line def1 was unable to display a long term induced resistance upon Micromonospora spp. inoculation. In conclusion, nodule isolated Micromonospora strains should be considered excellent candidates as biocontrol agents as they combine both direct antifungal activity against plant pathogens and the ability to prime plant immunity.

  6. Aircraft ride quality controller design using new robust root clustering theory for linear uncertain systems

    Science.gov (United States)

    Yedavalli, R. K.

    1992-01-01

    The aspect of controller design for improving the ride quality of aircraft in terms of damping ratio and natural frequency specifications on the short period dynamics is addressed. The controller is designed to be robust with respect to uncertainties in the real parameters of the control design model such as uncertainties in the dimensional stability derivatives, imperfections in actuator/sensor locations and possibly variations in flight conditions, etc. The design is based on a new robust root clustering theory developed by the author by extending the nominal root clustering theory of Gutman and Jury to perturbed matrices. The proposed methodology allows to get an explicit relationship between the parameters of the root clustering region and the uncertainty radius of the parameter space. The current literature available for robust stability becomes a special case of this unified theory. The bounds derived on the parameter perturbation for robust root clustering are then used in selecting the robust controller.

  7. Root-microbe systems: the effect and mode of interaction of Stress Protecting Agent (SPA Stenotrophomonas rhizophila DSM14405T

    Directory of Open Access Journals (Sweden)

    Peyman eAlavi

    2013-05-01

    Full Text Available Stenotrophomonas rhizophila has great potential for applications in biotechnology and biological control due to its ability to both promote plant growth and protect roots against biotic and a-biotic stresses, yet little is known about the mode of interactions in the root-environment system. We studied mechanisms associated with osmotic stress using transcriptomic and microscopic approaches. In response to salt and root extracts, the transcriptome of S. rhizophila DSM14405T changed drastically. We found a notably similar response for several functional gene groups responsible for general stress protection, energy production, and cell motility. However, unique changes in the transcriptome were also observed: the negative regulation of flagella-coding genes together with the up-regulation of the genes responsible for biofilm formation and alginate biosynthesis were identified as a single mechanism of S. rhizophila DSM14405T against salt shock. However, production and excretion of glucosylglycerol (GG were found as a remarkable mechanism for the stress protection of this Stenotrophomonas strain. For S. rhizophila treated with root exudates, the shift from the planktonic lifestyle to a sessile one was measured as expressed in the down-regulation of flagellar-driven motility. These findings fit well with the observed positive regulation of host colonization genes and microscopic images that show different colonization patterns of oilseed rape roots. Spermidine, described as a plant growth regulator, was also newly identified as a protector against stress. Overall, we identified mechanisms of Stenotrophomonas to protect roots against osmotic stress in the environment. In addition to both the changes in life style and energy metabolism, phytohormons and osmoprotectants were also found to play a key role in stress protection.

  8. Gray value differences to dentin of root posts radiographed with digital intraoral systems and conventional X-ray films.

    Science.gov (United States)

    Wicht, S; Pfeiffer, P; Rother, U; Nergiz, I; Schmage, P

    2011-01-01

    This study compared the gray value differences to dentin of titanium and FRC root posts in anterior and posterior teeth radiographed with digital intraoral systems and conventional x-ray film. Radiographic images (n=5) of titanium or fiber-reinforced composite (FRC) root posts placed in extracted teeth were taken with six digital intraoral radiographic devices and conventional x-ray film (control group). Gray value differences were evaluated between the root posts and root dentin. Statistical analyses of the results were performed with three-way and one-way ANOVA with Bonferroni-Dunn's multiple comparisons post-hoc analyses (α=0.05). Significantly higher gray value differences of titanium and FRC posts were found in anterior teeth but not in molars for XIOS, Sidexis and Visualix digital intraoral systems, but not for RVG, DenOptix and VistaScan (FRC posts). Except for DenOptix with incisors and molars and VistaScan with molars, conventional x-ray films showed significantly lower gray value differences of titanium posts in incisors and molars compared to the corresponding digital radiographs.

  9. C-shaped mandibular primary first molar diagnosed with cone beam computed tomography: A novel case report and literature review of primary molars′ root canal systems

    OpenAIRE

    Gozde Ozcan; Ahmet Ercan Sekerci; Fatma Kocoglu

    2016-01-01

    Knowledge of the different anatomical variations in root canal system of dedicious dentition will improve the practice of the pediatric dentists. The teeth with C-shaped root canal configurations are definitely a problem in endodontic treatment. Dentists who are specialists of endodontics must have adequate knowledge about various root canal morphologies of primary tooth that have a tendency for rapid progression of dental caries to achieve a technically satisfactory outcome. This report pres...

  10. 5-HT systems: emergent targets for memory formation and memory alterations.

    Science.gov (United States)

    Meneses, Alfredo

    2013-01-01

    Drugs acting through 5-hydroxytryptamine (serotonin or 5-HT) systems modulate memory and its alterations, although the mechanisms involved are poorly understood. 5-HT drugs may present promnesic and/or antiamnesic (or even being amnesic) effects. Key questions regarding 5-HT markers include whether receptors directly or indirectly participate and/or contribute to the physiological and pharmacological basis of memory and its pathogenesis; hence, the major aim of this article was to examine recent advances in emergent targets of the 5-HT systems for memory formation and memory alterations. Recent reviews and findings are summarized, mainly in the context of the growing notion of memory deficits in brain disorders (e.g., posttraumatic stress disorder, mild cognitive impairment, consumption of drugs, poststroke cognitive dysfunctions, schizophrenia, Parkinson disease, and infection-induced memory impairments). Mainly, mammalian and (some) human data were the focus. At least agonists and antagonists for 5-HT1A/1B, 5-HT2A/2B/2C, 5-HT3, 5-HT4, 5-HT6, and 5-HT7 receptors as well as serotonin uptake inhibitors seem to have a promnesic and/or antiamnesic effect in different conditions and 5-HT markers seem to be associated to neural changes. Available evidence offers clues about the possibilities, but the exact mechanisms remain unclear. For instance, 5-HT transporter expression seems to be a reliable neural marker related to memory mechanisms and its alterations.

  11. Cone-beam computed tomography analysis of the apical third of curved roots after mechanical preparation with different automated systems

    Energy Technology Data Exchange (ETDEWEB)

    Oliveira, Cesar Augusto Pereira; Pascoalato, Cristina [University of Southern Santa Catarina (UNISUL), Tubarao, SC (Brazil); Meurer, Maria Ines [Federal University of Santa Catarina (UFSC), Florianopolis, SC (Brazil); Silva, Silvio Rocha Correa, E-mail: silvio@foar.unesp.b [Sao Paulo State University (UNESP), Araraquara, SP (Brazil)

    2009-07-01

    The present study evaluated by cone-beam computed tomography (CBCT) the apical canal transportation and centralizing ability of different automated systems after root canal preparation. The mesiobuccal canals of maxillary first molars (n=10 per group) were prepared with: GI - reciprocating system with K-Flexofile; GII - reciprocating system with NiTiFlex files; GIII - rotary system with K3 instruments; GIV - rotary system with RaCe instruments. CBCT scans were taken before and after biomechanical preparation up to a 40.02 diameter. Canal transportation was determined by measuring the smallest distance between the inner canal walls and the mesial and distal sides of the root. The centralization ability corresponded to the difference between the measurements from transportation evaluation, using the linear voxel to voxel method of analysis. The mean transportation was 0.06 +- 0.14 mm, with a tendency to deviate to the mesial side of the root (n=22), with no statistically significant difference among the groups (p=0.4153). The mean centralization index was 0.15 +- 0.65 also without statistically significant difference among the groups (p=0.0881). It may be concluded that apical canal transportation and centralization ability were not influenced by the type of mechanical movement and instruments used. (author)

  12. Do shallow soil, low water availability, or their combination increase the competition between grasses with different root systems in karst soil?

    Science.gov (United States)

    Zhao, Yajie; Li, Zhou; Zhang, Jing; Song, Haiyan; Liang, Qianhui; Tao, Jianping; Cornelissen, Johannes H C; Liu, Jinchun

    2017-03-11

    Uneven soil depth and low water availability are the key limiting factors to vegetation restoration and reconstruction in limestone soils such as in vulnerable karst regions. Belowground competition will possibly increase under limited soil resources. Here, we investigate whether low resource availability (including shallow soil, low water availability, and shallow soil and low water availability combined) stimulates the competition between grasses with different root systems in karst soil, by assessing their growth response, biomass allocation, and morphological plasticity. In a full three-way factorial blocked design of soil depth by water availability by neighbor identity, we grew Festuca arundinacea (deep-rooted) and Lolium perenne (shallow-rooted) under normal versus shallow soil depth, high versus low water availability, and in monoculture (conspecific neighbor) versus mixture (neighbor of the other species). The key results were as follows: (1) total biomass and aboveground biomass in either of the species decreased with reduction of resources but were not affected by planting patterns (monoculture or mixture) even at low resource levels. (2) For F. arundinacea, root biomass, root mass fraction, total root length, and root volume were higher in mixture than in monoculture at high resource level (consistent with resource use complementarity), but lower in mixture than in monoculture at low resource levels (consistent with interspecific competition). In contrast for L. perenne, either at high or low resource level, these root traits had mostly similar values at both planting patterns. These results suggest that deep-rooted and shallow-rooted plant species can coexist in karst regions under current climatic regimes. Declining resources, due to shallow soil, a decrease in precipitation, or combined shallow soil and karst drought, increased the root competition between plants of deep-rooted and shallow-rooted species. The root systems of deep-rooted plants may be

  13. An In-Situ Root-Imaging System in the Context of Surface Detection of CO2

    Science.gov (United States)

    Apple, M. E.; Prince, J. B.; Bradley, A. R.; Zhou, X.; Lakkaraju, V. R.; Male, E. J.; Pickles, W.; Thordsen, J. J.; Dobeck, L.; Cunningham, A.; Spangler, L.

    2009-12-01

    Carbon sequestration is a valuable method of spatially confining CO2 belowground. The Zero Emissions Research Technology, (ZERT), site is an experimental facility in a former agricultural field on the Montana State University campus in Bozeman, Montana, where CO2 was experimentally released at a rate of 200kg/day in 2009 into a 100 meter underground injection well running parallel to the ground surface. This injection well, or pipe, has deliberate leaks at intervals, and CO2 travels from these leaks upward to the surface of the ground. The ZERT site is a model system designed with the purpose of testing methods of surface detection of CO2. One important aspect of surface detection is the determination of the effects of CO2 on the above and belowground portions of plants growing above sequestration fields. At ZERT, these plants consist of a pre-existing mixture of herbaceous species present at the agricultural field. Species growing at the ZERT site include several grasses, Dactylis glomerata (Orchard Grass), Poa pratensis (Kentucky Bluegrass), and Bromus japonicus (Japanese Brome); the nitrogen-fixing legumes Medicago sativa, (Alfalfa), and Lotus corniculatus, (Birdsfoot trefoil); and an abundance of Taraxacum officinale, (Dandelion). Although the aboveground parts of the plants at high CO2 are stressed, as indicated by changes in hyperspectral plant signatures, leaf fluorescence and leaf chlorophyll content, we are interested in determining whether the roots are also stressed. To do so, we are combining measurements of soil conductivity and soil moisture with root imaging. We are using an in-situ root-imaging system manufactured by CID, Inc. (Camas, WA), along with image analysis software (Image-J) to analyze morphometric parameters in the images and to determine what effects, if any, the presence of leaking and subsequently upwelling CO2 has on the phenology of root growth, growth and turnover of individual fine and coarse roots, branching patterns, and root

  14. Biological soil crust as a bio-mediator alters hydrological processes in stabilized dune system of the Tengger Desert, China

    Science.gov (United States)

    Li, Xinrong

    2016-04-01

    Biological soil crust (BSC) is a vital component in the stabilized sand dunes with a living cover up to more than 70% of the total, which has been considered as a bio-mediator that directly influences and regulates the sand dune ecosystem processes. However, its influences on soil hydrological processes have been long neglected in Chinese deserts. In this study, BSCs of different successional stages were chose to test their influence on the hydrological processes of stabilized dune, where the groundwater deep exceeds 30m, further to explore why occur the sand-binding vegetation replacement between shrubs and herbs. Our long-term observation (60 years) shows that cyanobacteria crust has been colonized and developed after 3 years since the sand-binding vegetation has been established and dune fixation using planted xerophytic shrubs and made sand barrier (straw-checkerboard) on shifting dune surface, lichen and moss crust occurred after 20 years, and the cover of moss dominated crust could reach 70 % after 50 years. The colonization and development of BSC altered the initial soil water balance of revegetated areas by influencing rainfall infiltration, soil evaporation and dew water entrapment. The results show that BSC obviously reduced the infiltration that occurred during most rainfall events (80%), when rainfall was greater than 5 mm or less than 20 mm. The presence of BSC reduced evaporation of topsoil after small rainfall (BSC. Moreover, the effect of the later successional BSC to dew entrapment, rainfall infiltration and evaporation was more obvious than the early successional BSC on stabilized dunes. In general, BSC reduced the amount of rainfall water that reached deeper soil (0.4-3m), which is where the roots of shrubs are primarily distributed. These changes in the soil moisture pattern induced shifting of sand-binding vegetation from initial planted xerophytic shrub communities with higher coverage (35%) to complex communities dominated by shallow-rooted

  15. The biocontrol endophytic bacterium Pseudomonas fluorescens PICF7 induces systemic defense responses in aerial tissues upon colonization of olive roots

    Directory of Open Access Journals (Sweden)

    Carmen eGómez-Lama Cabanás

    2014-09-01

    Full Text Available Pseudomonas fluorescens PICF7, a native olive root endophyte and effective biocontrol agent (BCA against Verticillium wilt of olive, is able to trigger a broad range of defense responses in root tissues of this woody plant. In order to elucidate whether strain PICF7 also induces systemic defense responses in above-ground organs, aerial tissues of olive plants grown under non-gnotobiotic conditions were collected at different time points after root bacterization with this endophytic BCA. A suppression subtractive hybridization (SSH cDNA library, enriched in up-regulated genes, was generated. This strategy enabled the identification of 376 ESTs (99 contigs and 277 singlets, many of them related to response to different stresses. Five ESTs, involved in defense responses, were selected to carry out time-course quantitative real-time PCR (qRT-PCR experiments aiming to: (i validate the induction of these genes, and (ii shed light on their expression pattern along time (from 1 to 15 days. Induction of olive genes potentially coding for lypoxigenase 2, catalase, 1-aminocyclopropane-1-carboxylate oxidase and phenylananine ammonia-lyase was thus confirmed at some time points. Computational analysis also revealed that different transcription factors were up-regulated in olive aerial tissues (i.e. jerf, bHLH, WRKYs, as previously reported for roots. Results confirmed that root colonization by this endophytic bacterium does not only trigger defense responses in this organ but also mount a wide array of systemic defense responses in distant tissues (stems, leaves. This sheds light on how olive plants respond to the ‘non-hostile’ colonization by a bacterial endophyte and how induced defense response can contribute to the biocontrol activity of strain PICF7.

  16. Understanding Trichoderma in the root system of Pinus radiata: associations between rhizosphere colonisation and growth promotion for commercially grown seedlings.

    Science.gov (United States)

    Hohmann, Pierre; Jones, E Eirian; Hill, Robert A; Stewart, Alison

    2011-08-01

    Two Trichoderma isolates (T. hamatum LU592 and T. atroviride LU132) were tested for their ability to promote the growth and health of commercially grown Pinus radiata seedlings. The colonisation behaviour of the two isolates was investigated to relate rhizosphere competence and root penetration to subsequent effects on plant performance. Trichoderma hamatum LU592 was shown to enhance several plant health and growth parameters. The isolate significantly reduced seedling mortality by up to 29%, and promoted the growth of shoots (e.g. height by up to 16%) and roots (e.g. dry weight by up to 31%). The introduction of LU592 as either seed coat or spray application equally improved seedling health and growth demonstrating the suitability of both application methods for pine nursery situations. However, clear differences in rhizosphere colonisation and root penetration between the two application methods highlighted the need for more research on the impact of inoculum densities. When spray-applied, LU592 was found to be the predominant Trichoderma strain in the plant root system, including bulk potting mix, rhizosphere and endorhizosphere. In contrast, T. atroviride LU132 was shown to colonise the root system poorly, and no biological impact on P. radiata seedlings was detected. This is the first report to demonstrate rhizosphere competence as a useful indicator for determining Trichoderma bio-inoculants for P. radiata. High indigenous Trichoderma populations with similar population dynamics to the introduced strains revealed the limitations of the dilution plating technique, but this constraint was alleviated to some extent by the use of techniques for morphological and molecular identification of the introduced isolates.

  17. Assessing the role of deep rooted vegetation in the climate system with model simulations: mechanism, comparison to observations and implications for Amazonian deforestation

    Energy Technology Data Exchange (ETDEWEB)

    Kleidon, A.; Heimann, M. [Max-Planck-Institut fuer Meteorologie, Hamburg (Germany)

    2000-02-01

    Deep rooted vegetation (of up to 68 m) has been found in many parts of the tropics. However, models of the general atmospheric circulation (GCMs) typically use rooting depths of less than 2 m in their land surface parametrizations. How does the incorporation of deep roots into such a model affect the simulated climate? We assess this question by using a GCM and find that deeper roots lead to a pronounced seasonal response. During the dry season, evapotranspiration and the associated latent heat flux are considerably increased over large regions leading to a cooling of up to 8 K. The enhanced atmospheric moisture is transported towards the main convection areas in the inner tropical convergence zone where it supplies more energy to convection thus intensifying the tropical circulation patterns. Comparison to different kinds of data reveals that the simulation with deeper roots is much closer to observations. The inclusion of deep roots also leads to a general increased climatic sensitivity to rooting depth change. We investigate this aspect in the context of the climatic effects of large-scale deforestation in Amazonia. Most of the regional and remote changes can be attributed to the removal of deep roots. We conclude that deep rooted vegetation is an important part of the tropical climate system. Without the consideration of deep roots, the present-day surface climate cannot adequately be simulated. (orig.)

  18. Reduced ABA Accumulation in the Root System is Caused by ABA Exudation in Upland Rice (Oryza sativa L. var. Gaoshan1) and this Enhanced Drought Adaptation.

    Science.gov (United States)

    Shi, Lu; Guo, Miaomiao; Ye, Nenghui; Liu, Yinggao; Liu, Rui; Xia, Yiji; Cui, Suxia; Zhang, Jianhua

    2015-05-01

    Lowland rice (Nipponbare) and upland rice (Gaoshan 1) that are comparable under normal and moderate drought conditions showed dramatic differences in severe drought conditions, both naturally occurring long-term drought and simulated rapid water deficits. We focused on their root response and found that enhanced tolerance of upland rice to severe drought conditions was mainly due to the lower level of ABA in its roots than in those of the lowland rice. We first excluded the effect of ABA biosynthesis and catabolism on root-accumulated ABA levels in both types of rice by monitoring the expression of four OsNCED genes and two OsABA8ox genes. Next, we excluded the impact of the aerial parts on roots by suppressing leaf-biosynthesized ABA with fluridone and NDGA (nordihydroguaiaretic acid), and measuring the ABA level in detached roots. Instead, we proved that upland rice had the ability to export considerably more root-sourced ABA than lowland rice under severe drought, which improved ABA-dependent drought adaptation. The investigation of apoplastic pH in root cells and root anatomy showed that ABA leakage in the root system of upland rice was related to high apoplastic pH and the absence of Casparian bands in the sclerenchyma layer. Finally, taking some genes as examples, we predicted that different ABA levels in rice roots stimulated distinct ABA perception and signaling cascades, which influenced its response to water stress.

  19. Huanglongbing, a systemic disease, restructures the bacterial community associated with citrus roots.

    Science.gov (United States)

    Trivedi, Pankaj; Duan, Yongping; Wang, Nian

    2010-06-01

    To examine the effect of pathogens on the diversity and structure of plant-associated bacterial communities, we carried out a molecular analysis using citrus and huanglongbing as a host-disease model. 16S rRNA gene clone library analysis of citrus roots revealed shifts in microbial diversity in response to pathogen infection. The clone library of the uninfected root samples has a majority of phylotypes showing similarity to well-known plant growth-promoting bacteria, including Caulobacter, Burkholderia, Lysobacter, Pantoea, Pseudomonas, Stenotrophomonas, Bacillus, and Paenibacillus. Infection by "Candidatus Liberibacter asiaticus" restructured the native microbial community associated with citrus roots and led to the loss of detection of most phylotypes while promoting the growth of bacteria such as Methylobacterium and Sphingobacterium. In pairwise comparisons, the clone library from uninfected roots contained significantly higher 16S rRNA gene diversity, as reflected in the higher Chao 1 richness estimation (P citrus by "Ca. Liberibacter asiaticus" has a profound effect on the structure and composition of the bacterial community associated with citrus roots.

  20. Efficiency of a semiconductor diode laser in disinfection of the root canal system in endodontics: An in vitro study

    Directory of Open Access Journals (Sweden)

    Mithra N Hegde

    2015-01-01

    Full Text Available Context: The success of endodontic treatment depends on the eradication of microbes from the rootcanal system and prevention of reinfection. The root canal is shaped with hand and rotary instruments under constant irrigation to remove the inflamed and necrotic tissue, microbes/biofilms, and other debris from the root canal space. The main goal of instrumentation is to facilitate effective irrigation, disinfection, and filling. Throughout the history of endodontics, endeavors have continuously been made to develop more effective irrigant delivery and agitation systems for root canal irrigation. Aim: The purpose of this study was to evaluate the efficacy of three different newer irrigation delivery techniques; namely Endovac, Stropko Irrigator, and laser disinfection with 5.25% sodium hypochlorite. Materials and Methods: Forty teeth after disinfection by Occupational Safety and Health Administration (OSHA regulations were instrumented and inoculated with bacterial strains of Enterococcusfaecalis. The teeth were divided into four groups, in the experimental group, the irrigants were delivered with the Endovac, Stropko Irrigator, and laser irradiation and the control group which received no irrigation. The samples were incubated in Muller-Hilton media plates and incubated for 24 h. Statistical analysis used: The colony forming units were determined and statistically analyzed using the chi-square test. Results: According to the results obtained, laser irradiation resulted in complete disinfection of the root canal system. The Endovac system resulted in significant disinfection as compared to the Stropko Irrigator system. Conclusion: Laser irradiation resulted in significantly higher antimicrobial effects compared with the Endovac and Stropko irrigation groups when in conjunction with sodium hypochlorite

  1. In vitro Comparison of Apical Debris Extrusion Using Rotary and Reciprocating Systems in Severely Curved Root Canals

    Science.gov (United States)

    Delvarani, Abbas; Mohammadzadeh Akhlaghi, Nahid; Aminirad, Raana; Tour Savadkouhi, Sohrab; Vahdati, Seyed Aliakbar

    2017-01-01

    Introduction: The aim of this in vitro study was to compare the amount of apically extruded debris after root canal preparation using rotary and reciprocating systems in severely curved root canals. Methods and Materials: Thirty six extracted human mandibular first molars with 25-35° curvature in their mesiobuccal (MB) canal (according to Schneider’s method) were cleaned and shaped with ProTaper and WaveOne systems. The extruded debris was collected and their net weight was calculated. To compare the efficiency of the two systems, the operation time was also measured. The data were analyzed with t-test. Results: The amount of extruded debris in WaveOne group was significantly greater in comparison with ProTaper group (26%). The operating time for ProTaper was however, significantly longer than WaveOne. Conclusion: Both root preparation systems caused some degree of debris extrusion through the apical foramen. However, this amount was greater in WaveOne instruments. PMID:28179921

  2. Security Policies for Mitigating the Risk of Load Altering Attacks on Smart Grid Systems

    Energy Technology Data Exchange (ETDEWEB)

    Ryutov, Tatyana; AlMajali, Anas; Neuman, Clifford

    2015-04-01

    While demand response programs implement energy efficiency and power quality objectives, they bring potential security threats to the Smart Grid. The ability to influence load in a system enables attackers to cause system failures and impacts the quality and integrity of power delivered to customers. This paper presents a security mechanism to monitor and control load according to a set of security policies during normal system operation. The mechanism monitors, detects, and responds to load altering attacks. We examined the security requirements of Smart Grid stakeholders and constructed a set of load control policies enforced by the mechanism. We implemented a proof of concept prototype and tested it using the simulation environment. By enforcing the proposed policies in this prototype, the system is maintained in a safe state in the presence of load drop attacks.

  3. Multiscale systems analysis of root growth and development: modeling beyond the network and cellular scales.

    Science.gov (United States)

    Band, Leah R; Fozard, John A; Godin, Christophe; Jensen, Oliver E; Pridmore, Tony; Bennett, Malcolm J; King, John R

    2012-10-01

    Over recent decades, we have gained detailed knowledge of many processes involved in root growth and development. However, with this knowledge come increasing complexity and an increasing need for mechanistic modeling to understand how those individual processes interact. One major challenge is in relating genotypes to phenotypes, requiring us to move beyond the network and cellular scales, to use multiscale modeling to predict emergent dynamics at the tissue and organ levels. In this review, we highlight recent developments in multiscale modeling, illustrating how these are generating new mechanistic insights into the regulation of root growth and development. We consider how these models are motivating new biological data analysis and explore directions for future research. This modeling progress will be crucial as we move from a qualitative to an increasingly quantitative understanding of root biology, generating predictive tools that accelerate the development of improved crop varieties.

  4. Effects of 24-Epibrassinolide on Antioxidant System in Cucumber Seedling Roots Under Hypoxia Stress

    Institute of Scientific and Technical Information of China (English)

    KANG Yun-yan; GUO Shi-rong; LI Juan; DUAN Jiu-ju

    2007-01-01

    This article aims to study the effects of exogenous 24-epibrassinolide (EBR) on the changes in ROS, activities of antioxidative enzymes and antioxidants in cucumber (Cucumis sativus L.) seedling roots under hypoxia stress. Seedlings of a hypoxianormoxic or hypoxic nutrient solutions that were added or not added with 10-3 mg L-1 EBR. Under hypoxia stress, the ROS levels and the lipid peroxidation were significantly increased in the roots upon exposure to hypoxia stress, which were inhibited by EBR application. The EBR treatment significantly increased the seedlings growth and SOD, APX, GR activities, and contents of AsA and GSH under hypoxia stress. From the results obtained in this study, it can be concluded that oxidative damage on seedling roots by hypoxia stress can be considerably alleviated and the tolerance of plants was elevated.

  5. [Low-cost simple anchorage systems in the removable hybrid prosthesis. Locator Root Attachment and Würzburg post].

    Science.gov (United States)

    Teubner, Eckart; Galindo, Martha L; Arnold, Dario; Marinello, Carlo P

    2009-01-01

    For a simple and provisional retention of a removable prosthesis, less expensive direct retainers are an option compared to indirect cast gold copings with attachment. The Dalbo-Rotex-retainer and the Ticap-system are clinically established. The Locator Root attachment and the Würzburger Stift were recently introduced. The Locator Root attachment uses a massive profiled cylindrical post as a radicular anchorage. The Würzburger Stift has a small endodontic part which is retained by four spreadable lamellae in a convergent cavity. They further differ in the design of the male and female part. Depending on the clinical situation these characteristics can offer benefits and disadvantages. Both systems are documented and their indication, advantages and restrictions are discussed with clinical relevance.

  6. [Comparative assessment of inductive effects of Azospirillum lectins with different antigenic properties on the signal systems of wheat seedling roots].

    Science.gov (United States)

    Alen'kina, S A; Petrova, L P; Sokolova, M K; Chernyshova, M P; Trutneva, K A; Bogatyrev, V A; Nikitina, V E

    2014-01-01

    The lectins of associative nitrogen-fixing bacteria Azospirillum brasilense Sp7 and its mutant A. brasilense Sp7.2.3 were shown to have different effects on the components of the wheat seedling root signal system, namely to regulate the levels of cAMP, nitric oxide, diacylglycerol, and salicylic acid, as well as to induce the activities of superoxide dismutase and lipoxygenase. Our results make it possible to consider azospirilla lectins as inducers of the signal systems in wheat seedling roots, since they cause development of several flows of primary signals. These data are of general biological importance, since lectins are present in all living organisms and most ot the functions of lectins remain insufficiently understood.

  7. The occurrence of dauciform roots amongst Western Australian reeds, rushes and sedges, and the impact of phosphorus supply on dauciform-root development in Schoenus unispiculatus (Cyperaceae).

    Science.gov (United States)

    Shane, Michael W; Dixon, Kingsley W; Lambers, Hans

    2005-03-01

    * The incidence of species that develop specialised 'dauciform' lateral roots, which are hypothesised to be important for phosphorus (P) acquisition, is uncertain. We investigated their occurrence in Australian reed, rush and sedge species, grown at low P concentration in nutrient solution, and studied the response of Schoenus unispiculatus (Cyperaceae) to a range of P concentrations. * We assessed the fraction of root biomass invested in dauciform roots, their respiration and net P-uptake rate, and the P status of roots and leaves. * Dauciform-root development occurred only in particular genera of Cyperaceae when grown at low P supply. Increased P supply was associated with increased growth of S. unispiculatus and increased leaf [P]. Dauciform-root growth was reduced by increased P supply, and reduced P uptake co-occurred with the complete suppression of dauciform roots. * The P-induced suppression of dauciform roots in Cyperaceae is similar to that observed for proteoid roots in members of Proteaceae and Lupinus albus. The response of dauciform roots to altered P supply and their absence from root systems of some sedge species are discussed in terms of managed and natural systems.

  8. Renal Oxidative Stress Induced by Long-Term Hyperuricemia Alters Mitochondrial Function and Maintains Systemic Hypertension

    Directory of Open Access Journals (Sweden)

    Magdalena Cristóbal-García

    2015-01-01

    Full Text Available We addressed if oxidative stress in the renal cortex plays a role in the induction of hypertension and mitochondrial alterations in hyperuricemia. A second objective was to evaluate whether the long-term treatment with the antioxidant Tempol prevents renal oxidative stress, mitochondrial alterations, and systemic hypertension in this model. Long-term (11-12 weeks and short-term (3 weeks effects of oxonic acid induced hyperuricemia were studied in rats (OA, 750 mg/kg BW, OA+Allopurinol (AP, 150 mg/L drinking water, OA+Tempol (T, 15 mg/kg BW, or vehicle. Systolic blood pressure, renal blood flow, and vascular resistance were measured. Tubular damage (urine N-acetyl-β-D-glucosaminidase and oxidative stress markers (lipid and protein oxidation along with ATP levels were determined in kidney tissue. Oxygen consumption, aconitase activity, and uric acid were evaluated in isolated mitochondria from renal cortex. Short-term hyperuricemia resulted in hypertension without demonstrable renal oxidative stress or mitochondrial dysfunction. Long-term hyperuricemia induced hypertension, renal vasoconstriction, tubular damage, renal cortex oxidative stress, and mitochondrial dysfunction and decreased ATP levels. Treatments with Tempol and allopurinol prevented these alterations. Renal oxidative stress induced by hyperuricemia promoted mitochondrial functional disturbances and decreased ATP content, which represent an additional pathogenic mechanism induced by chronic hyperuricemia. Hyperuricemia-related hypertension occurs before these changes are evident.

  9. Glycans in the immune system and The Altered Glycan Theory of Autoimmunity: a critical review.

    Science.gov (United States)

    Maverakis, Emanual; Kim, Kyoungmi; Shimoda, Michiko; Gershwin, M Eric; Patel, Forum; Wilken, Reason; Raychaudhuri, Siba; Ruhaak, L Renee; Lebrilla, Carlito B

    2015-02-01

    Herein we will review the role of glycans in the immune system. Specific topics covered include: the glycosylation sites of IgE, IgM, IgD, IgE, IgA, and IgG; how glycans can encode "self" identity by functioning as either danger associated molecular patterns (DAMPs) or self-associated molecular patterns (SAMPs); the role of glycans as markers of protein integrity and age; how the glycocalyx can dictate the migration pattern of immune cells; and how the combination of Fc N-glycans and Ig isotype dictate the effector function of immunoglobulins. We speculate that the latter may be responsible for the well-documented association between alterations of the serum glycome and autoimmunity. Due to technological limitations, the extent of these autoimmune-associated glycan alterations and their role in disease pathophysiology has not been fully elucidated. Thus, we also review the current technologies available for glycan analysis, placing an emphasis on Multiple Reaction Monitoring (MRM), a rapid high-throughput technology that has great potential for glycan biomarker research. Finally, we put forth The Altered Glycan Theory of Autoimmunity, which states that each autoimmune disease will have a unique glycan signature characterized by the site-specific relative abundances of individual glycan structures on immune cells and extracellular proteins, especially the site-specific glycosylation patterns of the different immunoglobulin(Ig) classes and subclasses.

  10. Coconut irrigation water saving as a function of areas of the concentration of the root system and soil cover

    Directory of Open Access Journals (Sweden)

    Vera Lucia Antunes de Lima

    2008-12-01

    Full Text Available The Brazilian production of coconut has not been sufficient to attend the internal market demand which has resulted in great importations of dry and semi industrialized coconut (IBGE, 2006. The northeast of Brazil has the greatest coconut production and is, at the same time, characterized for its high evapotranspiration demand and the lowest precipitation, therefore, it is necessary to optimize the irrigation water used. During the development phase of the coconut tree, most of the root system concentrates around 1m of radius, and in the adult phase, in larger part, to a radius up to 2m. The traditional procedure of calculation of the water volume to be applied through irrigation, normally considers the area given by the crop planting spacing and a canopy cover coefficient. This results in great volumes of water applied unnecessarily. To save water, this study investigates the calculation of the volume of irrigation water considering the areas where larger concentration of the root system occurs. For the first year of development of the coconut tree, four areas of irrigation delimited by rings of zinc with diameters of 0.7 m, 0.8, 0.9 and 1.0 m were used to irrigate the portion with the larger concentration of the root system, and two conditions of soil covering (covered and bare soil, plus a control (4 x 2 + 1, resulting in nine treatments with three repetitions, totaling 27 plots. The procedure proposed in this research for the calculation of the water volume to be applied in the coconut crop, based on areas of larger concentration of the root system, promoted considerable economy of water, in relation to the procedure traditionally used. The isolation of the soil surface in order to avoid the evaporation contributed to a substantial reduction of the applied volume of water as well.

  11. Apical root canal transportation of different pathfinding systems and their effects on shaping ability of ProTaper Next

    OpenAIRE

    Turker, Sevinc Aktemur; Uzunoglu, Emel

    2015-01-01

    Background This study aimed to compare glide path preparation of different pathfinding systems and their effects on the apical transportation of ProTaper Next (Dentsply Maillefer, Ballaigues, Switzerland) in mesial root canals of extracted human mandibular molars, using digital subtraction radiography. Material and Methods The mesial canals of 40 mandibular first molars (with curvature angles between 25° and 35°) were selected for this study. The specimens were divided randomly into 4 groups ...

  12. Social isolation impairs adult neurogenesis in the limbic system and alters behaviors in female prairie voles.

    Science.gov (United States)

    Lieberwirth, Claudia; Liu, Yan; Jia, Xixi; Wang, Zuoxin

    2012-09-01

    Disruptions in the social environment, such as social isolation, are distressing and can induce various behavioral and neural changes in the distressed animal. We conducted a series of experiments to test the hypothesis that long-term social isolation affects brain plasticity and alters behavior in the highly social prairie vole (Microtus ochrogaster). In Experiment 1, adult female prairie voles were injected with a cell division marker, 5-bromo-2'-deoxyuridine (BrdU), and then same-sex pair-housed (control) or single-housed (isolation) for 6 weeks. Social isolation reduced cell proliferation, survival, and neuronal differentiation and altered cell death in the dentate gyrus of the hippocampus and the amygdala. In addition, social isolation reduced cell proliferation in the medial preoptic area and cell survival in the ventromedial hypothalamus. These data suggest that long-term social isolation affects distinct stages of adult neurogenesis in specific limbic brain regions. In Experiment 2, isolated females displayed higher levels of anxiety-like behaviors in both the open field and elevated plus maze tests and higher levels of depression-like behavior in the forced swim test than controls. Further, isolated females showed a higher level of affiliative behavior than controls, but the two groups did not differ in social recognition memory. Together, our data suggest that social isolation not only impairs cell proliferation, survival, and neuronal differentiation in limbic brain areas, but also alters anxiety-like, depression-like, and affiliative behaviors in adult female prairie voles. These data warrant further investigation of a possible link between altered neurogenesis within the limbic system and behavioral changes.

  13. Clifford algebra is the natural framework for root systems and Coxeter groups. Group theory: Coxeter, conformal and modular groups

    CERN Document Server

    Dechant, Pierre-Philippe

    2016-01-01

    In this paper, we make the case that Clifford algebra is the natural framework for root systems and reflection groups, as well as related groups such as the conformal and modular groups: The metric that exists on these spaces can always be used to construct the corresponding Clifford algebra. Via the Cartan-Dieudonn\\'e theorem all the transformations of interest can be written as products of reflections and thus via `sandwiching' with Clifford algebra multivectors. These multivector groups can be used to perform concrete calculations in different groups, e.g. the various types of polyhedral groups, and we treat the example of the tetrahedral group $A_3$ in detail. As an aside, this gives a constructive result that induces from every 3D root system a root system in dimension four, which hinges on the facts that the group of spinors provides a double cover of the rotations, the space of 3D spinors has a 4D euclidean inner product, and with respect to this inner product the group of spinors can be shown to be cl...

  14. Phenotype analysis of Russian dandelion root tissues from the national plant germplasm system collection

    Science.gov (United States)

    Russian dandelion (Taraxacum kok-saghyz) (TKS) produces high quality natural rubber (NR), cis-1,4 polyisoprene, by biosynthesis, and has been used historically as a source of NR during times of short supply or high prices for Hevea NR. The rubber is primarily located in root tissues along with appre...

  15. Systems analysis of transcriptome data provides new hypotheses about Arabidopsis root response to nitrate treatments

    Directory of Open Access Journals (Sweden)

    Javier eCanales

    2014-02-01

    Full Text Available Nitrogen (N is an essential macronutrient for plant growth and development. Plants adapt to changes in N availability partly by changes in global gene expression. We integrated publicly available root microarray data under contrasting nitrate conditions to identify new genes and functions important for adaptive nitrate responses in Arabidopsis thaliana roots. Overall, more than two thousand genes exhibited changes in expression in response to nitrate treatments in Arabidopsis thaliana root organs. Global regulation of gene expression by nitrate depends largely on the experimental context. However, despite significant differences from experiment to experiment in the identity of regulated genes, there is a robust nitrate response of specific biological functions. Integrative gene network analysis uncovered relationships between nitrate-responsive genes and eleven highly co-expressed gene clusters (modules. Four of these gene network modules have robust nitrate responsive functions such as transport, signaling and metabolism. Network analysis hypothesized G2-like transcription factors are key regulatory factors controlling transport and signaling functions. Our meta-analysis highlights the role of biological processes not studied before in the context of the nitrate response such as root hair development and provides testable hypothesis to advance our understanding of nitrate responses in plants.

  16. Computer-Based Instruction: Roots, Origins, Applications, Benefits, Features, Systems, Trends and Issues.

    Science.gov (United States)

    Hofstetter, Fred T.

    Dealing exclusively with instructional computing, this paper describes how computers are delivering instruction in a wide variety of subjects to students of all ages and explains why computer-based education is currently having a profound impact on education. After a discussion of roots and origins, computer applications are described for…

  17. Genetic analysis of the gravitropic set-point angle in lateral roots of arabidopsis

    Science.gov (United States)

    Mullen, J. L.; Hangarter, R. P.

    2003-05-01

    Research on gravity responses in plants has mostly focused on primary roots and shoots, which typically orient to a vertical orientation. However, the distribution of lateral organs and their characteristically non-vertical growth orientation are critical for the determination of plant form. For example, in Arabidopsis, when lateral roots emerge from the primary root, they grow at a nearly horizontal orientation. As they elongate, the roots slowly curve until they eventually reach a vertical orientation. The regulation of this lateral root orientation is an important component affecting overall root system architecture. We found that this change in orientation is not simply due to the onset of gravitropic competence, as non-vertical lateral roots are capable of both positive and negative gravitropism. Thus, the horizontal growth of new lateral roots appears to be determined by what is called the gravitropic set-point angle (GSA). This developmental control of the GSA of lateral roots in Arabidopsis provides a useful system for investigating the components involved in regulating gravitropic responses. Using this system, we have identified several Arabidopsis mutants that have altered lateral root orientations but maintain normal primary root orientation.

  18. Bacterial antagonists of fungal pathogens also control root-knot nematodes by induced systemic resistance of tomato plants.

    Science.gov (United States)

    Adam, Mohamed; Heuer, Holger; Hallmann, Johannes

    2014-01-01

    The potential of bacterial antagonists of fungal pathogens to control the root-knot nematode Meloidogyne incognita was investigated under greenhouse conditions. Treatment of tomato seeds with several strains significantly reduced the numbers of galls and egg masses compared with the untreated control. Best performed Bacillus subtilis isolates Sb4-23, Mc5-Re2, and Mc2-Re2, which were further studied for their mode of action with regard to direct effects by bacterial metabolites or repellents, and plant mediated effects. Drenching of soil with culture supernatants significantly reduced the number of egg masses produced by M. incognita on tomato by up to 62% compared to the control without culture supernatant. Repellence of juveniles by the antagonists was shown in a linked twin-pot set-up, where a majority of juveniles penetrated roots on the side without inoculated antagonists. All tested biocontrol strains induced systemic resistance against M. incognita in tomato, as revealed in a split-root system where the bacteria and the nematodes were inoculated at spatially separated roots of the same plant. This reduced the production of egg masses by up to 51%, while inoculation of bacteria and nematodes in the same pot had only a minor additive effect on suppression of M. incognita compared to induced systemic resistance alone. Therefore, the plant mediated effect was the major reason for antagonism rather than direct mechanisms. In conclusion, the bacteria known for their antagonistic potential against fungal pathogens also suppressed M. incognita. Such "multi-purpose" bacteria might provide new options for control strategies, especially with respect to nematode-fungus disease complexes that cause synergistic yield losses.

  19. Bacterial antagonists of fungal pathogens also control root-knot nematodes by induced systemic resistance of tomato plants.

    Directory of Open Access Journals (Sweden)

    Mohamed Adam

    Full Text Available The potential of bacterial antagonists of fungal pathogens to control the root-knot nematode Meloidogyne incognita was investigated under greenhouse conditions. Treatment of tomato seeds with several strains significantly reduced the numbers of galls and egg masses compared with the untreated control. Best performed Bacillus subtilis isolates Sb4-23, Mc5-Re2, and Mc2-Re2, which were further studied for their mode of action with regard to direct effects by bacterial metabolites or repellents, and plant mediated effects. Drenching of soil with culture supernatants significantly reduced the number of egg masses produced by M. incognita on tomato by up to 62% compared to the control without culture supernatant. Repellence of juveniles by the antagonists was shown in a linked twin-pot set-up, where a majority of juveniles penetrated roots on the side without inoculated antagonists. All tested biocontrol strains induced systemic resistance against M. incognita in tomato, as revealed in a split-root system where the bacteria and the nematodes were inoculated at spatially separated roots of the same plant. This reduced the production of egg masses by up to 51%, while inoculation of bacteria and nematodes in the same pot had only a minor additive effect on suppression of M. incognita compared to induced systemic resistance alone. Therefore, the plant mediated effect was the major reason for antagonism rather than direct mechanisms. In conclusion, the bacteria known for their antagonistic potential against fungal pathogens also suppressed M. incognita. Such "multi-purpose" bacteria might provide new options for control strategies, especially with respect to nematode-fungus disease complexes that cause synergistic yield losses.

  20. Echium acanthocarpum hairy root cultures, a suitable system for polyunsaturated fatty acid studies and production

    Directory of Open Access Journals (Sweden)

    Ravelo Ángel G

    2011-04-01

    Full Text Available Abstract Background The therapeutic and health promoting role of highly unsaturated fatty acids (HUFAs from fish, i.e. eicosapentaenoic acid (EPA, 20:5n-3 and docosahexaenoic acid (DHA, 22:6n-3 are well known. These same benefits may however be shared by some of their precursors, the polyunsaturated fatty acids (PUFAs, such as stearidonic acid (SDA, 18:4 n-3. In order to obtain alternative sources for the large-scale production of PUFAs, new searches are being conducted focusing on higher plants oils which can contain these n-3 and n-6 C18 precursors, i.e. SDA and GLA (18:3n-6, γ-linolenic acid. Results The establishment of the novel Echium acanthocarpum hairy root cultures represents a powerful tool in order to research the accumulation and metabolism of fatty acids (FAs in a plant particularly rich in GLA and SDA. Furthermore, this study constitutes the first example of a Boraginaceae species hairy root induction and establishment for FA studies and production. The dominant PUFAs, 18:2n-6 (LA, linoleic acid and 18:3n-6 (GLA, accounted for about 50% of total FAs obtained, while the n-3 PUFAs, 18:3n-3 (ALA, α-linolenic acid and 18:4n-3 (SDA, represented approximately 5% of the total. Production of FAs did not parallel hairy root growth, and the optimal productivity was always associated with the highest biomass density during the culture period. Assuming a compromise between FA production and hairy root biomass, it was determined that sampling times 4 and 5 gave the most useful FA yields. Total lipid amounts were in general comparable between the different hairy root lines (29.75 and 60.95 mg/g DW, with the major lipid classes being triacylglycerols. The FAs were chiefly stored in the hairy roots with very minute amounts being released into the liquid nutrient medium. Conclusions The novel results presented here show the utility and high potential of E. acanthocarpum hairy roots. They are capable of biosynthesizing and accumulating a large

  1. Production Performance of Root Systems of Four Forage Legume Species and Their Development Characteristics in Loess Plateau,China

    Institute of Scientific and Technical Information of China (English)

    Zhang; Jianquan; Zhang; Jiyu; Wang; Yanrong; Xie; Wengang; Li; Juncheng

    2014-01-01

    Production performance of four forage legumes species of Medicago sativa,Onobrychis viciifolia,Lotus corniculatus and Galega officinalis were determined,including plant height,above-ground biomass per unit area,tillers per unit area,fertile tillers per unit area,shoot /leaf ratio and fresh /dry matter weight ratio,and the distribution characteristics of their root systems in 0- 100 cm soil layers with 10 cm interval were studied. Results showed that the average aboveground fresh biomass(4 a and 5 a) of four forage legumes species successively were L. corniculatus > M. sativa > O. viciifolia > G. officinalis. The average plant heights in two years successively were O. viciifolia > M. sativa > G. officinalis > L. corniculatus. Tillers per unit area of four forage legume species in two years successively were M. sativa > L. corniculatus > O. viciifolia > G. officinalis. Fertile tillers per unit area in two years were O. viciifolia > M. sativa > L. corniculatus > G. officinalis. Average shoot /leaf ratio in two years were G. officinalis > M. sativa > O. viciifolia > L. corniculatus. Average moisture contents of four forage legume species in two years successively were G. officinalis > L. corniculatus > M. sativa = O. viciifolia. The distribution characteristics of root systems of four forage legumes species in 0- 100 cm soil layers were as follows: the root weights of M. sativa in 0- 40 cm soil layers accounted for about 98. 3% of total root weight,that of O. viciifolia in 0- 30 cm soil layers was 85. 8%,that of L. corniculatus in 0- 10 cm soil layers was 80%,and that of G. officinalis in 0- 40 cm soil layers was 81. 4%. The results suggested that L. corniculatus was suited to plant in slighter degraded pasture to control water and soil erosion in early stage,G. officinalis with strong lateral roots was adapted to degraded grassland in the Loess Plateau where soil nutrient was poor,while O. viciifolia and M. sativa with potentially strong main root were fit for water

  2. ANATOMO-MORPHOLOGICAL FEUTURES OF THE ROOT CANAL SYSTEM IN GEORGIAN POPULATION - CONE-BEAM COMPUTED TOMOGRAPHY STUDY.

    Science.gov (United States)

    Beshkenadze, E; Chipashvili, N

    2015-10-01

    Incomplete and superficial knowledge of morphological types and anatomical variations of the root canal system will become the reason leading to the failure of endodontic treatment. cone-beam computed tomography (CBCT) - it is a technologically more sophisticated, interesting, reliable, non-invasive imaging technique with high degree of visualization, considered as a particularly important and useful tool to study complexity and variability of canal system. 2753 teeth of 228 patients have been studied by CT. Ages of the patients varied within 25-55 years. Among them 122 men and 106 women. Maxillary teeth - 1394 and mandibular - 1359, respectively. The aim of our study was investigation and evaluation of: tooth length, number of roots and canals, type of configuration, root canal curvature and degree of curvature in Georgian population. The results of the study revealed interesting data and anatomical characteristics, those replicating the racial signs and differs from the data recorded by the other researchers, became evident. In studying of dental form variations were interested anatomists (description and comparison) anthropologists, biologists, palaeontologists and stomatologists. The field of human dental anatomy has not been completely explored so, the modern human teeth still remain a matter of continual curiosity and research. The knowledge of anatomical characteristics of dental root canals will help clinicians to optimize the algorithm of endodontic treatment. Thus, statistic data are not the universal criterias, however, basing on these indicators anthropometrical data of roots and canals vary according to the geographic zones and nationalities. The study of variations in tooth form has interested anatomists (description and comparison), anthropologists, biologists, palaeontologists and dentists. The field of human dental anatomy has not been completely explored and the dentition of modern man still remains a matter of continual curiosity and research

  3. Effects of PEG-Induced Water Deficit in Solanum nigrum on Zn and Ni Uptake and Translocation in Split Root Systems

    Directory of Open Access Journals (Sweden)

    Urs Feller

    2015-06-01

    Full Text Available Drought strongly influences root activities in crop plants and weeds. This paper is focused on the performance of the heavy metal accumulator Solanum nigrum, a plant which might be helpful for phytoremediation. The water potential in a split root system was decreased by the addition of polyethylene glycol (PEG 6000. Rubidium, strontium and radionuclides of heavy metals were used as markers to investigate the uptake into roots, the release to the shoot via the xylem, and finally the basipetal transport via the phloem to unlabeled roots. The uptake into the roots (total contents in the plant was for most makers more severely decreased than the transport to the shoot or the export from the shoot to the unlabeled roots via the phloem. Regardless of the water potential in the labeling solution, 63Ni and 65Zn were selectively redistributed within the plant. From autoradiographs, it became evident that 65Zn accumulated in root tips, in the apical shoot meristem and in axillary buds, while 63Ni accumulated in young expanded leaves and roots but not in the meristems. Since both radionuclides are mobile in the phloem and are, therefore, well redistributed within the plant, the unequal transfer to shoot and root apical meristems is most likely caused by differences in the cell-to-cell transport in differentiation zones without functional phloem (immature sieve tubes.

  4. Lodo de esgoto e sistema radicular da pupunheira Sewage sludge doses and the root system of peach palm

    Directory of Open Access Journals (Sweden)

    Fernando Vinicio Armas Vega

    2005-04-01

    Full Text Available Os efeitos do lodo de esgoto sobre o sistema radicular da pupunheira foram estudados em experimento em campo, em blocos casualizados, instalado em Ubatuba (SP, em julho 2001, na densidade de 5.000 plantas ha-1. As doses de lodo de esgoto fresco (79,7 % de umidade utilizadas foram de 0, 38, 76 e 152 t ha-1, equivalentes a 0, 100, 200 e 400 kg ha-1 de N. Os tratamentos foram aplicados no sulco de plantio, adicionando-se 15 g por planta de KCl como fonte de K. A análise do sistema radicular foi efetuada doze meses após, por meio de trado e de trincheiras e com o auxílio de fotos digitais. Detectou-se que o sistema radicular de pupunheiras com um ano de campo estava concentrado nas camadas superficiais (acima de 75 % nos primeiros 20 cm, assim como em distâncias de até 0,5 m da base da planta. O lodo de esgoto modificou positivamente a densidade do solo, alterando também favoravelmente a densidade das raízes. Houve aumento na biomassa radicular proporcional às doses de lodo de esgoto, existindo uma relação direta daquela com a fitomassa aérea. Doses de lodo equivalentes a 200 e 400 kg de N contribuíram para aprofundar o sistema radicular e proporcionaram maior quantidade relativa de raízes finas.The effects of sewage sludge doses on the root system of peach palm were studied in a field experiment, in randomized complete blocks, carried out in Ubatuba, state of São Paulo, Brazil. The trial was set up in July 2001, with a density of 5,000 plants ha-1. The sewage sludge doses (79.7 % water content were 0, 38, 76, and 152 t ha-1, which were equivalent to doses of 0, 100, 200, and 400 kg ha-1 of N. The treatments were applied in the planting furrow, and every plant was provided with K by a dose of 15 g potassium chloride. The root system was analyzed one year after planting using soil auger and digging of trenches and with the help of digital images. It was concluded that the root system of one-year old peach palm was concentrated in the

  5. Minimization of the root of a quadratic functional under a system of affine equality constraints with application to portfolio management

    Science.gov (United States)

    Landsman, Zinoviy

    2008-10-01

    We present an explicit closed form solution of the problem of minimizing the root of a quadratic functional subject to a system of affine constraints. The result generalizes Z. Landsman, Minimization of the root of a quadratic functional under an affine equality constraint, J. Comput. Appl. Math. 2007, to appear, see sciencedirect.com/science/journal/03770427>, articles in press, where the optimization problem was solved under only one linear constraint. This is of interest for solving significant problems pertaining to financial economics as well as some classes of feasibility and optimization problems which frequently occur in tomography and other fields. The results are illustrated in the problem of optimal portfolio selection and the particular case when the expected return of finance portfolio is certain is discussed.

  6. Effects of altered auditory feedback across effector systems: production of melodies by keyboard and singing.

    Science.gov (United States)

    Pfordresher, Peter Q; Mantell, James T

    2012-01-01

    We report an experiment that tested whether effects of altered auditory feedback (AAF) during piano performance differ from its effects during singing. These effector systems differ with respect to the mapping between motor gestures and pitch content of auditory feedback. Whereas this action-effect mapping is highly reliable during phonation in any vocal motor task (singing or speaking), mapping between finger movements and pitch occurs only in limited situations, such as piano playing. Effects of AAF in both tasks replicated results previously found for keyboard performance (Pfordresher, 2003), in that asynchronous (delayed) feedback slowed timing whereas alterations to feedback pitch increased error rates, and the effect of asynchronous feedback was similar in magnitude across tasks. However, manipulations of feedback pitch had larger effects on singing than on keyboard production, suggesting effector-specific differences in sensitivity to action-effect mapping with respect to feedback content. These results support the view that disruption from AAF is based on abstract, effector independent, response-effect associations but that the strength of associations differs across effector systems.

  7. Systemic Cytokine Profiles in Strongyloides stercoralis Infection and Alterations following Treatment.

    Science.gov (United States)

    Anuradha, Rajamanickam; Munisankar, Saravanan; Bhootra, Yukti; Jagannathan, Jeeva; Dolla, Chandrakumar; Kumaran, Paul; Shen, Kui; Nutman, Thomas B; Babu, Subash

    2015-11-23

    Strongyloides stercoralis is a soil-transmitted helminth organism that infects ~50 to 100 million people worldwide. Despite its widespread prevalence, very little is known about the immune response that characterizes human S. stercoralis infection. To study the systemic cytokine profile characteristic of Strongyloides infection, we measured the circulating levels of a large panel of pro- and anti-inflammatory cytokines in asymptomatic, infected individuals (n = 32) and compared them to those in uninfected, controls (n = 24). Infected individuals exhibited significantly lower circulating levels of proinflammatory cytokines (gamma interferon [IFN-γ], tumor necrosis factor alpha [TNF-α], and interleukin-1β [IL-1β]) and significantly higher levels of anti-inflammatory cytokines (IL-4, IL-5, IL-9, IL-10, IL-13, IL-27, IL-37, and transforming growth factor β [TGF-β]). Moreover, treatment of Strongyloides infection resulted in a significant reversal of the cytokine profile, with increased levels of proinflammatory (IFN-γ, TNF-α, IL-2, IL-17A, IL-17F, IL-22, IL-23, and IL-1β) and decreased levels of anti-inflammatory (IL-4, IL-5, IL-9, IL-10, IL-13, IL-27, IL-37, and TGF-β) cytokines following treatment. Thus, S. stercoralis infection is characterized by alterations in the levels of systemic cytokines, reflecting major alterations in the underlying immune response to this chronic helminth infection.

  8. Characterization of mature maize (Zea mays L.) root system architecture and complexity in a diverse set of Ex-PVP inbreds and hybrids.

    Science.gov (United States)

    Hauck, Andrew L; Novais, Joana; Grift, Tony E; Bohn, Martin O

    2015-01-01

    The mature root system is a vital plant organ, which is critical to plant performance. Commercial maize (Zea mays L.) breeding has resulted in a steady increase in plant performance over time, along with noticeable changes in above ground vegetative traits, but the corresponding changes in the root system are not presently known. In this study, roughly 2500 core root systems from field trials of a set of 10 diverse elite inbreds formerly protected by Plant Variety Protection plus B73 and Mo17 and the 66 diallel intercrosses among them were evaluated for root traits using high throughput image-based phenotyping. Overall root architecture was modeled by root angle (RA) and stem diameter (SD), while root complexity, the amount of root branching, was quantified using fractal analysis to obtain values for fractal dimension (FD) and fractal abundance (FA). For each trait, per se line effects were highly significant and the most important contributor to trait performance. Mid-parent heterosis and specific combining ability was also highly significant for FD, FA, and RA, while none of the traits showed significant general combining ability. The interaction between the environment and the additive line effect was also significant for all traits. Within the inbred and hybrid generations, FD and FA were highly correlated (rp ≥ 0.74), SD was moderately correlated to FD and FA (0.69 ≥ rp ≥ 0.48), while the correlation between RA and other traits was low (0.13 ≥ rp ≥ -0.40). Inbreds with contrasting effects on complexity and architecture traits were observed, suggesting that root complexity and architecture traits are inherited independently. A more comprehensive understanding of the maize root system and the way it interacts with the environment will be useful for defining adaptation to nutrient acquisition and tolerance to stress from drought and high plant densities, critical factors in the yield gains of modern hybrids.

  9. Android System Root Access and Detection%Android系统 Root权限获取与检测

    Institute of Scientific and Technical Information of China (English)

    邢晓燕; 金洪颖; 田敏

    2013-01-01

    Android is an operating system based on the Linux kernel and designed primarily for touchscreen mobile devices such as smartphones .In computer security, a sandbox is a security mechanism for separating running programs. It is often used to execute untested code, or untrusted programs from unveriifed third-parties, suppliers, untrusted users. As Android derives from the Linux kernel, rooting an Android device is similar to accessing administrative permissions on Linux. Rooting is required for more advanced and potentially dangerous operations including modifying or deleting system ifles, removing carrier-or manufacturer-installed applications, and low-level access to the hardware itself. This paper introduces the common process of Rooting and the method of Rooting detection.%Android是一个基于Linux多用户多进程操作系统,在这个系统中,应用程序(或者系统的部分)会在自己的进程中运行。系统和应用之间的安全性通过Linux的Sandbox(沙盒机制)在进程级别来强制实现的,比如会给应用程序分配user ID和Group ID。在Android系统中Root拥有最高权限,如果成为Root用户就可以实现破解。本文介绍了Android的安全机制和常用的Android获取Root权限的方法,以及如何检测Android是否被Root。

  10. Impact of root-induced mobilization of zinc on stable Zn isotope variation in the soil-plant system.

    Science.gov (United States)

    Houben, David; Sonnet, Philippe; Tricot, Guillaume; Mattielli, Nadine; Couder, Eléonore; Opfergelt, Sophie

    2014-07-15

    Stable Zn isotopes are increasingly used to trace the source of metal pollution in the environment and to gain a better understanding of the biogeochemical cycle of Zn. In this work, we investigated the effect of plants on Zn isotope fractionation in the soil-plant system of the surface horizon of two Zn-rich Technosols (pH 6.73-7.51, total Zn concentration = 9470-56600 mg kg(-1)). In a column experiment, the presence of Agrostis capillaris L. significantly increased the mobilization of Zn from soil to leachate, predominantly as a result of root-induced soil acidification. The zinc isotope compositions of plants and leachates indicated that the Zn uptake by A. capillaris did not fractionate Zn isotopes as compared to the leachates. Within the plant, heavier Zn isotopes were preferentially retained in roots (Δ66Znroot - shoot=+0.24 to +0.40 ‰). More importantly, the Zn released in leachates due to root-induced mobilization was isotopically heavier than the Zn released in the absence of plants (Δ66Zn=+0.16 to +0.18 ‰). This indicates that the rhizosphere activity of A. capillaris mobilized Zn from another pool than the one that spontaneously releases Zn upon contact with the percolating solution. Mobilization of Zn by the roots might thus exert a stronger influence on the Zn isotope composition in the soil solution than the Zn uptake by the plant. This study highlights the key role of the rhizosphere activity in Zn release in soil and demonstrates that stable Zn isotopes provide a useful proxy for the detection of Zn mobilization in soil-plant systems.

  11. Light as stress factor to plant roots - case of root halotropism.

    Science.gov (United States)

    Yokawa, Ken; Fasano, Rossella; Kagenishi, Tomoko; Baluška, František

    2014-01-01

    Despite growing underground, largely in darkness, roots emerge to be very sensitive to light. Recently, several important papers have been published which reveal that plant roots not only express all known light receptors but also that their growth, physiology and adaptive stress responses are light-sensitive. In Arabidopsis, illumination of roots speeds-up root growth via reactive oxygen species-mediated and F-actin dependent process. On the other hand, keeping Arabidopsis roots in darkness alters F-actin distribution, polar localization of PIN proteins as well as polar transport of auxin. Several signaling components activated by phytohormones are overlapping with light-related signaling cascade. We demonstrated that the sensitivity of roots to salinity is altered in the light-grown Arabidopsis roots. Particularly, light-exposed roots are less effective in their salt-avoidance behavior known as root halotropism. Here we discuss these new aspects of light-mediated root behavior from cellular, physiological and evolutionary perspectives.

  12. Evaluation of Biomass Yield and Water Treatment in Two Aquaponic Systems Using the Dynamic Root Floating Technique (DRF)

    OpenAIRE

    Laura Silva; Eucario Gasca-Leyva; Edgardo Escalante; Kevin M Fitzsimmons; David Valdés Lozano

    2015-01-01

    The experiment evaluates the food production and water treatment of TAN, NO2−–N, NO3−–N, and PO43− in two aquaponics systems using the dynamic root floating technique (DRF). A separate recirculation aquaculture system (RAS) was used as a control. The fish cultured was Nile tilapia (Oreochromis niloticus). The hydroponic culture in one treatment (PAK) was pak choy (Brassica chinensis,) and in the other (COR) coriander (Coriandrum sativum). Initial and final weights were determined for the fis...

  13. Thermal variability alters the impact of climate warming on consumer-resource systems.

    Science.gov (United States)

    Fey, Samuel B; Vasseur, David A

    2016-07-01

    Thermal variation through space and time are prominent features of ecosystems that influence processes at multiple levels of biological organization. Yet, it remains unclear how populations embedded within biological communities will respond to climate warming in thermally variable environments, particularly as climate change alters existing patterns of thermal spatial and temporal variability. As environmental temperatures increase above historical ranges, organisms may increasingly rely on extreme habitats to effectively thermoregulate. Such locations desirable in their thermal attributes (e.g., thermal refugia) are often suboptimal for resource acquisition (e.g., underground tunnels). Thus, via the expected increase in both mean temperatures and diel thermal variation, climate warming may heighten the trade-off for consumers between behaviors maximizing thermal performance and those maximizing resource acquisition. Here, we integrate behavioral, physiological, and trophic ecology to provide a general framework for understanding how temporal thermal variation, mediated by access to a thermal refugium, alters the response of consumer-resource systems to warming. We use this framework to predict how temporal variation and access to thermal refugia affect the persistence of consumers and resources during climate warming, how the quality of thermal refugia impact consumer-resource systems, and how consumer-resource systems with fast vs. slow ecological dynamics respond to warming. Our results show that the spatial thermal variability provided by refugia can elevate consumer biomass at warmer temperatures despite reducing the fraction of time consumers spend foraging, that temporal variability detrimentally impacts consumers at high environmental temperatures, and that consumer-resource systems with fast ecological dynamics are most vulnerable to climate warming. Thus, incorporating both estimates of thermal variability and species interactions may be necessary to

  14. Alterations in the hippocampal endocannabinoid system in diet-induced obese mice.

    Science.gov (United States)

    Massa, Federico; Mancini, Giacomo; Schmidt, Helmut; Steindel, Frauke; Mackie, Ken; Angioni, Carlo; Oliet, Stéphane H R; Geisslinger, Gerd; Lutz, Beat

    2010-05-05

    The endocannabinoid (eCB) system plays central roles in the regulation of food intake and energy expenditure. Its alteration in activity contributes to the development and maintenance of obesity. Stimulation of the cannabinoid receptor type 1 (CB(1) receptor) increases feeding, enhances reward aspects of eating, and promotes lipogenesis, whereas its blockade decreases appetite, sustains weight loss, increases insulin sensitivity, and alleviates dysregulation of lipid metabolism. The hypothesis has been put forward that the eCB system is overactive in obesity. Hippocampal circuits are not directly involved in the neuronal control of food intake and appetite, but they play important roles in hedonic aspects of eating. We investigated the possibility whether or not diet-induced obesity (DIO) alters the functioning of the hippocampal eCB system. We found that levels of the two eCBs, 2-arachidonoyl glycerol (2-AG) and anandamide, were increased in the hippocampus from DIO mice, with a concomitant increase of the 2-AG synthesizing enzyme diacylglycerol lipase-alpha and increased CB(1) receptor immunoreactivity in CA1 and CA3 regions, whereas CB(1) receptor agonist-induced [(35)S]GTPgammaS binding was unchanged. eCB-mediated synaptic plasticity was changed in the CA1 region, as depolarization-induced suppression of inhibition and long-term depression of inhibitory synapses were enhanced. Functionality of CB(1) receptors in GABAergic neurons was furthermore revealed, as mice specifically lacking CB(1) receptors on this neuronal population were partly resistant to DIO. Our results show that DIO-induced changes in the eCB system affect not only tissues directly involved in the metabolic regulation but also brain regions mediating hedonic aspects of eating and influencing cognitive processes.

  15. Trypanosoma cruzi disrupts thymic homeostasis by altering intrathymic and systemic stress-related endocrine circuitries.

    Directory of Open Access Journals (Sweden)

    Ailin Lepletier

    2013-11-01

    Full Text Available We have previously shown that experimental infection caused by Trypanosoma cruzi is associated with changes in the hypothalamus-pituitary-adrenal axis. Increased glucocorticoid (GC levels are believed to be protective against the effects of acute stress during infection but result in depletion of CD4(+CD8(+ thymocytes by apoptosis, driving to thymic atrophy. However, very few data are available concerning prolactin (PRL, another stress-related hormone, which seems to be decreased during T. cruzi infection. Considering the immunomodulatory role of PRL upon the effects caused by GC, we investigated if intrathymic cross-talk between GC and PRL receptors (GR and PRLR, respectively might influence T. cruzi-induced thymic atrophy. Using an acute experimental model, we observed changes in GR/PRLR cross-activation related with the survival of CD4(+CD8(+ thymocytes during infection. These alterations were closely related with systemic changes, characterized by a stress hormone imbalance, with progressive GC augmentation simultaneously to PRL reduction. The intrathymic hormone circuitry exhibited an inverse modulation that seemed to counteract the GC-related systemic deleterious effects. During infection, adrenalectomy protected the thymus from the increase in apoptosis ratio without changing PRL levels, whereas an additional inhibition of circulating PRL accelerated the thymic atrophy and led to an increase in corticosterone systemic levels. These results demonstrate that the PRL impairment during infection is not caused by the increase of corticosterone levels, but the opposite seems to occur. Accordingly, metoclopramide (MET-induced enhancement of PRL secretion protected thymic atrophy in acutely infected animals as well as the abnormal export of immature and potentially autoreactive CD4(+CD8(+ thymocytes to the periphery. In conclusion, our findings clearly show that Trypanosoma cruzi subverts mouse thymus homeostasis by altering intrathymic and

  16. Regulation of the High-Affinity Nitrate Transport System in Wheat Roots by Exogenous Abscisic Acid and Glutamine

    Institute of Scientific and Technical Information of China (English)

    Chao Cai; Xue-Qiang Zhao; Yong-Guan Zhu; Bin Li; Yi-Ping Tong; Zhen-Sheng Li

    2007-01-01

    Nitrate is a major nitrogen (N) source for most crops.Nitrate uptake by root cells is a key step of nitrogen metabolism and has been widely studied at the physiological and molecular levels.Understanding how nitrate uptake is regulated will help us engineer crops with improved nitrate uptake efficiency.The present study investigated the regulation of the high-affinity nitrate transport system (HATS) by exogenous abscisic acid (ABA) and glutamine (Gin) in wheat (Triticum aestivum L.) roots.Wheat seedlings grown in nutrient solution containing 2 mmollL nitrate as the only nitrogen source for 2 weeks were deprived of N for 4d and were then transferred to nutrient solution containing 50 μmol/L ABA, and 1 mmol/L Gin in the presence or absence of 2 mmol/L nitrate for 0, 0.5, 1, 2, 4, and 8 h.Treated wheat plants were then divided into two groups.One group of plants was used to investigate the mRNA levels of the HATS components NRT2 and NAR2 genes in roots through semi-quantitative RT-PCR approach, and the other set of plants were used to measure high-affinity nitrate influx rates in a nutrient solution containing 0.2 mmol/L 15 N-labeled nitrate.The results showed that exogenous ABA induced the expression of the TaNRT2.1, TaNRT2.2, TaNRT2.3, TaNAR2.1, and TaNAR2.2 genes in roots when nitrate was not present in the nutrient solution, but did not further enhance the induction of these genes by nitrate.Glutamine, which has been shown to inhibit the expression of NRT2 genes when nitrate is present in the growth media, did not inhibit this induction.When Gin was supplied to a nitrate-free nutrient solution, the expression of these five genes in roots was induced.These results imply that the inhibition by Gin of NRT2 expression occurs only when nitrate is present in the growth media.Although exogenous ABA and Gin induced HATS genes in the roots of wheat, they did not induce nitrate influx.

  17. Some Convincing Evidences of a Deep Root System Within an Interfluve Aquifer of Northeast Thailand

    Science.gov (United States)

    Jean-Pierre, Montoroi; Alain, Pierret; Jean-Luc, Maeght; Worraphan, Chintachao; Somjai, Chenyapanich; Kriengsak, Srisuk

    2016-10-01

    In Northeastern Thailand, dipterocarp forest has been cut massively in recent decades to be gradually replaced by cash crops. The aerial parts of the vegetation were sold or burned while underground parts have been degraded with time on site by microbial activity that converts the plant tissues in organic matter more or less mineralized (humus). A drilling program to implant deep piezometers (> 25 m) allowed (i) to describe and characterize the superficial formations (XRD analysis); (ii) to observe and quantify the presence of root biomass at several tens of meters in depth. Additional analyses (stable carbon isotope, SEM) showed that the deep roots are mainly from tree species and aged less than 60 years. The good state of preservation suggests favourable conditions such as the presence of a renewed deep groundwater.

  18. Root system reserve status, a potential barometer of carbon limitations in trees

    Science.gov (United States)

    Landhäusser, Simon

    2014-05-01

    Carbon reserve allocation in trees is an important factor in tree growth and survival which in turn influences the distribution of species and forest communities and their associated carbon, water and energy fluxes at multiple scales. We still lack a comprehensive understanding of the underlying mechanisms of carbon reserve allocation in trees and how they might be influenced by drought, biotic attack, and stand age. This is particularly true for mature trees. Over a period of eight years seasonal non-structural carbon reserves (NSC) were followed in different organs of mature aspens (Populus tremuloides Michx.). Foliar, twig, stem and root tissues were sampled. Over the eight years some of the aspen clones were defoliated in 2000, 2001 and/or 2007; results indicate that after the defoliation events the NSC reserves in the roots required much longer to recover than the NSC reserves in the twigs and stems of the crown. While reserve recovery in twigs was almost immediate in defoliated trees, root starch reserves recovered only fully after two growing seasons to values comparable to undefoliated trees. These results suggest that an allocation priority could exist, which in large part might be determined by a tissue's proximity to the canopy (crown). It is hypothesized that this would be most noticeable in tall trees with small live crown ratios resulting in greater carbon reserve withdrawal along the bole. This top-down allocation could result in carbon reserves shortages in the roots during carbon limitation, which could feedback on to the canopy, further reducing aboveground growth and potentially also resiliency to future stresses.

  19. A comparative evaluation of the increase in root canal surface area and canal transportation in curved root canals by three rotary systems: A cone-beam computed tomographic study

    Science.gov (United States)

    Prasanthi, Nalam NVD; Rambabu, Tanikonda; Sajjan, Girija S; Varma, K Madhu; Satish, R Kalyan; Padmaja, M

    2016-01-01

    Aim: The aim of this study was to measure the increase in root canal surface area and canal transportation after biomechanical preparation at 1, 3, and 5 mm short of the apex with three different rotary systems in both continuous rotary and reciprocating rotary motions. Materials and Methods: Sixty freshly extracted human mandibular molars with mesial root canal curvatures between 20° and 30° were included in the study. Teeth were randomly distributed into three groups (n = 20). Biomechanical preparations were done in all the mesial canals. In Group 1, instrumentation was done with ProTaper universal rotary files, Group 2, with K3XF rotary files, and Group 3, with LSX rotary files. Each group was further subdivided into subgroups A and B (n = 10) where instrumentation was done by continuous rotary and reciprocating rotary techniques, respectively. Increase in root canal surface area and canal transportation was measured using the preoperative and postoperative cone-beam computed tomography scans. Statistical Analysis: The data were analyzed by one-way ANOVA followed by Tukey pairwise multiple comparison tests. Results: Increase in root canal surface area was significantly more (P ProTaper and K3XF groups when compared to LSX group. Canal transportation was significantly more (P ProTaper group when compared to K3XF and LSX groups. There was no significant difference (P > 0.05) in increase of root canal surface area and canal transportation between continuous rotary and reciprocating rotary techniques for ProTaper Universal, K3XF and LSX groups. Conclusion: LSX rotary system showed minimal increase of root canal surface area and minimal canal transportation when compared to ProTaper and K3XF rotary systems. PMID:27656062

  20. Completeness of the System of Root Vectors of 2 × 2 Upper Triangular Infinite-Dimensional Hamiltonian Operators in Symplectic Spaces and Applications

    Institute of Scientific and Technical Information of China (English)

    Hua WANG; ALATANCANG; Junjie HUANG

    2011-01-01

    The authors investigate the completeness of the system of eigen or root vectors of the 2 x 2 upper triangular infinite-dimensional Hamiltonian operator H0.First,the geometrical multiplicity and the algebraic index of the eigenvalue of H0 are considered.Next,some necessary and sufficient conditions for the completeness of the system of eigen or root vectors of H0 are obtained. Finally,the obtained results are tested in several examples.

  1. Molecular diversity of arbuscular mycorrhizal fungi in onion roots from organic and conventional farming systems in the Netherlands.

    Science.gov (United States)

    Galván, Guillermo A; Parádi, István; Burger, Karin; Baar, Jacqueline; Kuyper, Thomas W; Scholten, Olga E; Kik, Chris

    2009-06-01

    Diversity and colonization levels of naturally occurring arbuscular mycorrhizal fungi (AMF) in onion roots were studied to compare organic and conventional farming systems in the Netherlands. In 2004, 20 onion fields were sampled in a balanced survey between farming systems and between two regions, namely, Zeeland and Flevoland. In 2005, nine conventional and ten organic fields were additionally surveyed in Flevoland. AMF phylotypes were identified by rDNA sequencing. All plants were colonized, with 60% for arbuscular colonization and 84% for hyphal colonization as grand means. In Zeeland, onion roots from organic fields had higher fractional colonization levels than those from conventional fields. Onion yields in conventional farming were positively correlated with colonization level. Overall, 14 AMF phylotypes were identified. The number of phylotypes per field ranged from one to six. Two phylotypes associated with the Glomus mosseae-coronatum and the G. caledonium-geosporum species complexes were the most abundant, whereas other phylotypes were infrequently found. Organic and conventional farming systems had similar number of phylotypes per field and Shannon diversity indices. A few organic and conventional fields had larger number of phylotypes, including phylotypes associated with the genera Glomus-B, Archaeospora, and Paraglomus. This suggests that farming systems as such did not influence AMF diversity, but rather specific environmental conditions or agricultural practices.

  2. Analysis of effects of a new environmental pollutant, bisphenol A, on antioxidant systems in soybean roots at different growth stages

    Science.gov (United States)

    Zhang, Jiazhi; Li, Xingyi; Zhou, Li; Wang, Lihong; Zhou, Qing; Huang, Xiaohua

    2016-03-01

    Bisphenol A (BPA) is an important industrial raw material. Because of its widespread use and increasing release into environment, BPA has become a new environmental pollutant. Previous studies about BPA’s effects in plants focus on a certain growth stage. However, the plant’s response to pollutants varies at different growth stages. Therefore, in this work, BPA’s effects in soybean roots at different growth stages were investigated by determining the reactive oxygen species levels, membrane lipid fatty acid composition, membrane lipid peroxidation, and antioxidant systems. The results showed that low-dose BPA exposure slightly caused membrane lipid peroxidation but didn’t activate antioxidant systems at the seedling stage, and this exposure did not affect above process at other growth stages; high-dose BPA increased reactive oxygen species levels and then caused membrane lipid peroxidation at all growth stages although it activated antioxidant systems, and these effects were weaker with prolonging the growth stages. The recovery degree after withdrawal of BPA exposure was negatively related to BPA dose, but was positively related to growth stage. Taken together, the effects of BPA on antioxidant systems in soybean roots were associated with BPA exposure dose and soybean growth stage.

  3. Pathogenesis of Bone Alterations in Gaucher Disease: The Role of Immune System

    Directory of Open Access Journals (Sweden)

    Juan Marcos Mucci

    2015-01-01

    Full Text Available Gaucher, the most prevalent lysosomal disorder, is an autosomal recessive inherited disorder due to a deficiency of glucocerebrosidase. Glucocerebrosidase deficiency leads to the accumulation of glucosylceramide primarily in cells of mononuclear-macrophage lineage. Clinical alterations are visceral, hematological, and skeletal. Bone disorder in Gaucher disease produces defects on bone metabolism and structure and patients suffer from bone pain and crisis. Skeletal problems include osteopenia, osteoporosis, osteolytic lesions, and osteonecrosis. On the other hand a chronic stimulation of the immune system is a well-accepted hallmark in this disease. In this review we summarize the latest findings in the mechanisms leading to the bone pathology in Gaucher disease in relationship with the proinflammatory state.

  4. The cyclic AMP cascade is altered in the fragile X nervous system.

    Directory of Open Access Journals (Sweden)

    Daniel J Kelley

    Full Text Available Fragile X syndrome (FX, the most common heritable cause of mental retardation and autism, is a developmental disorder characterized by physical, cognitive, and behavioral deficits. FX results from a trinucleotide expansion mutation in the fmr1 gene that reduces levels of fragile X mental retardation protein (FMRP. Although research efforts have focused on FMRP's impact on mGluR signaling, how the loss of FMRP leads to the individual symptoms of FX is not known. Previous studies on human FX blood cells revealed alterations in the cyclic adenosine 3', 5'-monophosphate (cAMP cascade. We tested the hypothesis that cAMP signaling is altered in the FX nervous system using three different model systems. Induced levels of cAMP in platelets and in brains of fmr1 knockout mice are substantially reduced. Cyclic AMP induction is also significantly reduced in human FX neural cells. Furthermore, cAMP production is decreased in the heads of FX Drosophila and this defect can be rescued by reintroduction of the dfmr gene. Our results indicate that a robust defect in cAMP production in FX is conserved across species and suggest that cAMP metabolism may serve as a useful biomarker in the human disease population. Reduced cAMP induction has implications for the underlying causes of FX and autism spectrum disorders. Pharmacological agents known to modulate the cAMP cascade may be therapeutic in FX patients and can be tested in these models, thus supplementing current efforts centered on mGluR signaling.

  5. Negative phototropism of rice root

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    @@It is often believed that the stem of higher plants has characteristics of positive phototropism, and the root shows no phototropism or no sensitivity to light though the root of Arabdopsis was reported possessing characteristics of negative phototropism. In this study, a distinct negative phototropism of the root system of rice seedlings was observed.

  6. Alterações na qualidade de raízes de mandioca(Manihot esculenta Crantz minimamente processadas Quality alterations in cassava roots (Manihot esculenta Crantz minimally processed

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    Andreia Alves

    2005-04-01

    Full Text Available A conservação pós-colheita das raízes de mandioca tem sido uma preocupação das indústrias e produtores, devido ao curto tempo de estocagem e a alta perecibilidade das raízes. Dois fenômenos são apontados como responsáveis pela deterioração das raízes, um de ordem fisiológica, provocando a perda inicial da qualidade por meio do desenvolvimento da descoloração vascular do tecido parenquimatoso, e o outro, de ordem microbiana, que se segue à fisiologia, responsável pela decomposição do produto. Dessa forma, com o presente trabalho, objetivou-se estudar a conservação das raízes de mandioca (Manihot esculenta Crantz, submetidas à higienização em água clorada e armazenadas em três tipos de embalagens, bandeja de isopor envolta em filme de policloreto de vinila (PVC, embalagem multicamada (poliéster Saram-13,5µ/polietileno-100µ com e sem vácuo e resfriadas (5 ± 0,5°C, mediante análises físico-químicas, microbiológicas, fisiológicas e sensoriais. A conservação de mandioca minimamente processada sob refrigeração para os tratamentos realizados, é possível diferenciando-se o período de armazenamento, sendo que para as amostras armazenadas em bandeja, o período de armazenamento foi de 7 dias, no selado e a vácuo foi de aproximadamente 24 dias, respectivamente.Post harvest of cassava roots has been a great concern in food industries and producers due to the short shelf life and high perishability. Several phenomena have been pointed out as responsible for root deterioration. Among them there are physiological aspects, that lead to losses in initial quality through vascular discoloration of parenchymatous tissue. On the other hand, phenomena from microbial origin, which follow the physiological alterations, are responsible for product decomposition. In this context, this work was aimed at investigating the conservation of cassava roots (Manihot esculenta Crantz submitted to chlorinated water, and stored using

  7. Systemic sclerosis patients present alterations in the expression of molecules involved in B cell regulation

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    Lilian eSoto

    2015-09-01

    Full Text Available The activation threshold of B cells is tightly regulated by an array of inhibitory and activator receptors, in such a way that disturbances in their expression can lead to the appearance of autoimmunity. The aim of this study was to evaluate the expression of activating and inhibitory molecules involved in the modulation of B cell functions in transitional, naïve and memory B cell sub-populations from systemic sclerosis patients. To achieve this, blood samples were drawn from thirty one systemic sclerosis patients and fifty three healthy individuals. Surface expression of CD86, MHC II, CD19, CD21, CD40, CD22, Siglec 10, CD35, and FcgammaRIIB was determined by flow cytometry. IL-10 production was evaluated by intracellular flow cytometry from isolated B cells. Soluble IL-6 and IL-10 levels were measured by ELISA from supernatants of stimulated B cells. Systemic sclerosis patients exhibit an increased frequency of transitional and naïve B cells related to memory B cells, compared to healthy controls. Transitional and naïve B cells from patients express higher levels of CD86 and FcgammaRIIB than healthy donors. Also, B cells from patients show high expression of CD19 and CD40, while memory cells from systemic sclerosis patients show reduced expression of CD35. CD19 and CD35 expression levels associate to different autoantibody profiles. IL-10+ B cells and secreted levels of IL-10 were markedly reduced in patients. In conclusion, systemic sclerosis patients show alterations in the expression of molecules involved in B cell regulation. These abnormalities may be determinant in the B cell hyperactivation observed in systemic sclerosis.

  8. Mechanisms of alteration of the immune system by ionizing radiations: a basis for radiation protection

    Energy Technology Data Exchange (ETDEWEB)

    Bourguignon, M. [Direction Generale de la Surete Nucleaire et de la Radioprotection, 75 - Paris (France); Perez, M.; Dubner, D.; Michelin, S. [Autoridad Regulatoria Nuclear, Buenos Aires (Argentina); Carosella, E. [CEA, Service de Recherches en Hemato -Immunologie, 75 - Paris (France)

    2006-07-01

    Full text of publication follows: Alterations of the immune system appear in relationship with exposure to ionizing radiation (IR) in different situations, e.g., accidents, radiation therapy of cancer, prenatal irradiation, some human diseases with hypersensitivity to IR and aging. Thus, the comprehension of the mechanisms of the alterations of the immune system by IR is necessary to elaborate strategies of protection and to pave the way for future possible therapies. At least 9 mechanisms of alterations can be identified: 1- Apoptosis. Apoptosis is a key mechanism of the natural regulation of the immune system and plays also a key role in the response to IR: lymphocytes die rapidly by apoptosis after exposure. Different pathways of induction of apoptosis have been identified, and include p53 dependent and mitochondria mediated pathways, as well as CD95 and ROS initiation; 2- TCR mutations. The T cell antigen receptor is responsible to discriminate between self and non self. Mutations of the TCR may result from exposure to IR; 3- Modification of the Th1-Th2 balance. T helper cells may express 2 distinct secretion patterns: Th1 cytokines promote cell-mediated immunity while Th2 cytokines favor humoral immunity. Although the effects of IR on the Th1/Th2 balance remains controversial, an imbalance towards a Th2 profile is likely and patients with cancer and systemic auto-immune disease often present a switch from Th1 to Th2; 4- Bystander effects and genetic instability. Stimulatory effect or genomic instability have been observed in haematopoietic cells exposed to IR and related to a bystander mechanism. 5- Shift toward an inflammatory profile. Ionizing radiation may induce a persistent inflammatory profile as a result of dis-regulation of cytokine production; such a status of persistent inflammation has been observed in Hiroshima and Nagasaki survivors. 6- Modification of antigen presentation. Antigen presentation by dendritic cells is an essential function preceding

  9. In vitro comparison rate of dental root canal transportation using two single file systems on the simulated resin blocks

    Directory of Open Access Journals (Sweden)

    Mohammad Javad Etesami

    2016-07-01

    Full Text Available Background and Aims: Cleaning and shaping is one of the most important stages in endodontic treatment. Single-file systems save time and reduce the risk of transmission of pathogens. This in vitro study was aimed to compare the rate of canal transportation after the preparation of the stimulated resin root canal with two single-file systems, namely Waveone and Reciproc. Materials and Methods: Thirty stimulated resin root canal blocks with size 8/0. 02 K file were randomly divided into two study groups. The preparation in Group A and Group B was performed using Reciproc and Waveone files, respectively. Pre and post- preparation photographs were taken and the images were superimposed to evaluate the inner and outer wall’s curvature tendency at three points (apical, middle and coronal using AutoCad pragram. Data were analyzed using T-test. Results: Based on the results, the degree of transportation in the inner and outer walls of the canal was less at the level of 3 millimeters (P0.05. Conclusion: Waveone showed better performance in the middle third of canal and this system maybe recommended.

  10. Root morphology and mycorrhizal symbioses together shape nutrient foraging strategies of temperate trees.

    Science.gov (United States)

    Chen, Weile; Koide, Roger T; Adams, Thomas S; DeForest, Jared L; Cheng, Lei; Eissenstat, David M

    2016-08-01

    Photosynthesis by leaves and acquisition of water and minerals by roots are required for plant growth, which is a key component of many ecosystem functions. Although the role of leaf functional traits in photosynthesis is generally well understood, the relationship of root functional traits to nutrient uptake is not. In particular, predictions of nutrient acquisition strategies from specific root traits are often vague. Roots of nearly all plants cooperate with mycorrhizal fungi in nutrient acquisition. Most tree species form symbioses with either arbuscular mycorrhizal (AM) or ectomycorrhizal (EM) fungi. Nutrients are distributed heterogeneously in the soil, and nutrient-rich "hotspots" can be a key source for plants. Thus, predicting the foraging strategies that enable mycorrhizal root systems to exploit these hotspots can be critical to the understanding of plant nutrition and ecosystem carbon and nutrient cycling. Here, we show that in 13 sympatric temperate tree species, when nutrient availability is patchy, thinner root species alter their foraging to exploit patches, whereas thicker root species do not. Moreover, there appear to be two distinct pathways by which thinner root tree species enhance foraging in nutrient-rich patches: AM trees produce more roots, whereas EM trees produce more mycorrhizal fungal hyphae. Our results indicate that strategies of nutrient foraging are complementary among tree species with contrasting mycorrhiza types and root morphologies, and that predictable relationships between below-ground traits and nutrient acquisition emerge only when both roots and mycorrhizal fungi are considered together.

  11. Judicial Control over Althingi: Altered Balance of Powers in the Constitutional System

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    Björg Thorarensen

    2016-06-01

    Full Text Available The article focuses on how the control of the judiciary over the legislature has increased in the last decades and the reasons for altered balance of powers in the Icelandic constitutional system are explored. Earlier theories of parliamentary precedence over other branches of state power are in transition. There is a growing trend towards the balancing of powers, in which the courts monitor that legislation complies with the constitution. A comparison is made with the developments in the constitutional systems of Denmark and Norway which points at the same direction. The European Convention on Human Rights and constitutional amendments in 1995 have affected the interpretation methods of the Icelandic courts and strengthened their supervisory role. Ideas underlying constitutional democracy, rule of law and effective remedies for individuals are prevailing over the idea of preferred position of the legislative power vis-à-vis the judiciary. The courts see it as a constitutional duty to adjudicate whether a legislative act conforms with constitutional human rights. The Supreme Court of Iceland has referred to the wide discretion of the legislature in the field of fiscal powers, such as regarding taxation and the social security system. However, even where legislation aims at the implementation of important political policies, the discretion of Althingi is subject to certain limits. The effective judicial control requires that Althingi must assess carefully whether legislation which limits constitutionally protected human rights conforms with the principles of equality and proportionality.

  12. Does Acupuncture Alter Pain-related Functional Connectivity of the Central Nervous System? A Systematic Review.

    Science.gov (United States)

    Villarreal Santiago, María; Tumilty, Steve; Mącznik, Aleksandra; Mani, Ramakrishnan

    2016-08-01

    Acupuncture has been studied for several decades to establish evidence-based clinical practice. This systematic review aims to evaluate evidence for the effectiveness of acupuncture in influencing the functional connectivity of the central nervous system in patients with musculoskeletal pain. A systematic search of the literature was conducted to identify studies in which the central response of acupuncture in patients with musculoskeletal pain was evaluated by neuroimaging techniques. Databases searched were AMED, CINAHL, Cochrane Library, EMBASE, MEDLINE, PEDro, Pubmed, SCOPUS, SPORTDiscuss, and Web of Science. Included studies were assessed by two independent reviewers for their methodological quality by using the Downs and Black questionnaire and for their levels of completeness and transparency in reporting acupuncture interventions by using Standards for Reporting Interventions in Clinical Trials of Acupuncture (STRICTA) criteria. Seven studies met the inclusion criteria. Three studies were randomized controlled trials (RCTs) and four studies were nonrandomized controlled trials (NRCTs). The neuroimaging techniques used were functional magnetic resonance imaging (fMRI) and positron emission tomography (PET). Positive effects on the functional connectivity of the central nervous system more consistently occurred during long-term acupuncture treatment. The results were heterogeneous from a descriptive perspective; however, the key findings support acupuncture's ability to alter pain-related functional connectivity in the central nervous system in patients with musculoskeletal pain.

  13. Alternative rooting induction of semi-hardwood olive cuttings by several auxin-producing bacteria for organic agriculture systems

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    M. C. Montero-Calasanz

    2013-01-01

    Full Text Available Southern Spain is the largest olive oil producer region in the world. In recent years organic agriculture systems have grown exponentially so that new alternative systems to produce organic olive cuttings are needed. Several bacterial isolates, namely Pantoea sp. AG9, Chryseobacterium sp. AG13, Chryseobacterium sp. CT348, Pseudomonas sp. CT364 and Azospirillum brasilense Cd (ATCC 29729, have been used to induce rooting in olive semi-hardwood cuttings of Arbequina, Hojiblanca and Picual cultivars of olive (Olea europea L. The first four strains were previously selected as auxin-producing bacteria and by their ability to promote rooting in model plants. They have been classified on the basis of their 16S rDNA gene sequence. The known auxin producer A. brasilense Cd strain has been used as a reference. The inoculation of olive cuttings was performed in two different ways: (i by dipping cuttings in a liquid bacterial culture or (ii by immersing them in a paste made of solid bacterial inoculant and sterile water. Under nursery conditions all of the tested bacterial strains were able to induce the rooting of olive cuttings to a similar or greater extent than the control cuttings treated with indole-3-butyric acid (IBA. The olive cultivars responded differently depending on the bacterial strain and the inoculation method. The strain that consistently gave the best results was Pantoea sp. AG9, the only one of the tested bacterial strains to express the enzyme 1-aminocyclopropane-1-carboxylate (ACC deaminase. The results are also discussed in terms of potential commercial interest and nursery feasibility performance of these strains.

  14. Automatic non-destructive three-dimensional acoustic coring system for in situ detection of aquatic plant root under the water bottom

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    Katsunori Mizuno

    2016-05-01

    Full Text Available Digging is necessary to detect plant roots under the water bottom. However, such detection is affected by the transparency of water and the working skills of divers, usually requires considerable time for high-resolution sampling, and always damages the survey site. We developed a new automatic non-destructive acoustic measurement system that visualizes the space under the water bottom, and tested the system in the in situ detection of natural plant roots. The system mainly comprises a two-dimensional waterproof stage controlling unit and acoustic measurement unit. The stage unit was electrically controlled through a notebook personal computer, and the space under the water bottom was scanned in a two-dimensional plane with the stage unit moving in steps of 0.01 m (±0.0001 m. We confirmed a natural plant root with diameter of 0.025–0.030 m in the reconstructed three-dimensional acoustic image. The plant root was at a depth of about 0.54 m and the propagation speed of the wave between the bottom surface and plant root was estimated to be 1574 m/s. This measurement system for plant root detection will be useful for the non-destructive assessment of the status of the space under the water bottom.

  15. Influence of the root system of the Common Osier (Salix viminalis L.) on abundance of heterotrophic bacteria in the willow sewage treatment system.

    Science.gov (United States)

    Lalke-Porczyk, Elzbieta; Brzezinska, Maria Swiontek; Donderski, Wojciech

    2009-06-01

    The impact of the Common Osier (Salix viminalis L.) root system on number (CFU) of heterotrophic bacteria and their production in a soil-willow filter was examined. The Osier rhizosphere was found to be suitable habitat for growth of the examined microbial group, and the root system stimulated development of heterotrophic bacteria. The rhizosphere bacteria to control soil bacteria (R:C) ratio oscillated between 2.48 and 2.75 depending on the location of sample collection. The highest abundance of bacteria as well as highest bacterial production was observed at location I, near sewage discharge onto the plot. There was a significant positive correlation between the number of heterotrophic bacteria and the bacterial production.

  16. Synchrotron X-ray microfluorescence measurement of metal distributions in Phragmites australis root system in the Yangtze River intertidal zone

    Energy Technology Data Exchange (ETDEWEB)

    Feng, Huan; Zhang, Weiguo; Qian, Yu; Liu, Wenliang; Yu, Lizhong; Yoo, Shinjae; Wang, Jun; Wang, Jia-Jun; Eng, Christopher; Liu, Chang-Jun; Tappero, Ryan

    2016-06-15

    This study investigates the distributions of Br, Ca, Cl, Cr, Cu, K, Fe, Mn, Pb, Ti, V and Zn inPhragmites australisroot system and the function of Fe nanoparticles in scavenging metals in the root epidermis using synchrotron X-ray microfluorescence, synchrotron transmission X-ray microscope measurement and synchrotron X-ray absorption near-edge structure techniques. The purpose of this study is to understand the mobility of metals in wetland plant root systems after their uptake from rhizosphere soils.Phragmites australissamples were collected in the Yangtze River intertidal zone in July 2013. The results indicate that Fe nanoparticles are present in the root epidermis and that other metals correlate significantly with Fe, suggesting that Fe nanoparticles play an important role in metal scavenging in the epidermis.

  17. Physicochemical and biological properties of a novel injectable polyurethane system for root canal filling

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    Wang J

    2015-01-01

    Full Text Available Jian Wang,1 Yi Zuo,1 Minghui Zhao,1 Jiaxing Jiang,1 Yi Man,2 Jun Wu,3 Yunjiu Hu,3 Changlei Liu,4 Yubao Li,1 Jidong Li11Research Center for Nano-Biomaterials, Analytical and Testing Center, Sichuan University, Chengdu, Sichuan, People’s Republic of China; 2College of Stomatology, Sichuan University, Chengdu, Sichuan, People’s Republic of China; 3Department of Orthopedics, Chongqing Medical University, Chongqing, People’s Republic of China; 4College of Chemistry, Sichuan University, Chengdu, Sichuan, People’s Republic of ChinaAbstract: A root canal sealer with antibacterial activity can be efficacious in preventing reinfection that results from residual microorganisms and/or the leakage of microorganisms. In the present study, a series of injectable, self-curing polyurethane (PU-based antibacterial sealers with different concentrations of silver phosphate (Ag3PO4 were fabricated. Subsequently, their physicochemical properties, antibacterial abilities, and preliminary cytocompatibilities were evaluated. The results indicated that the fabricated PU-based sealers can achieve a high conversion rate in a short amount of time. More than 95% of the isocyanate group of PU sealers with 3 wt% (PU3 and 5 wt% (PU5 concentrations of Ag3PO4 were included in the curing reaction after 7 hours. With the exception of those for film thickness for PU5, the results of setting time, film thickness, and solubility were able to meet the requirements of the International Organization for Standardization. The antibacterial tests showed that PU3 and PU5 exhibit stronger antimicrobial effects than that achieved with 1 wt% Ag3PO4 (PU1 and AH Plus (positive control against Streptococcus mutans. The cytocompatibility evaluation revealed that the PU1 and PU3 sealers possess good cytocompatibility and low cytotoxicity. These results demonstrate that the PU3 sealer offers good physicochemical and antimicrobial properties along with cytocompatibility, which may hold great

  18. Altered time structure of neuro-endocrine-immune system function in lung cancer patients

    Directory of Open Access Journals (Sweden)

    Carughi Stefano

    2010-06-01

    TcS1 was decreased in cancer patients. The melatonin/cortisol mean nocturnal level ratio was decreased in cancer patients. Conclusion The altered secretion and loss of circadian rhythmicity of many studied factors observed in the subjects suffering from neoplastic disease may be expression of gradual alteration of the integrated function of the neuro-immune-endocrine system

  19. Assessment Using AutoCAD Software of the Preparation of Dentin Walls in Root Canals Produced by 4 Different Endodontic Instrument Systems

    OpenAIRE

    Cristina Cabanillas; Manuel Monterde; Antonio Pallarés; Susana Aranda; Raquel Montes

    2015-01-01

    Objectives. To compare the effectiveness of four instrument systems for preparing oval root canals: manual instrumentation (Step-Back technique), ProTaper Universal, ProTaper Next, and Wave One. Material and Methods. For the purpose of this assessment, 60 teeth extracted for orthodontic or periodontal reasons, specifically canines and premolars with full coronal and root anatomy, were used and 15 samples were assigned to each group. The section of the canals was compared before and after inst...

  20. Investigation of Lab Fire Prevention Management System of Combining Root Cause Analysis and Analytic Hierarchy Process with Event Tree Analysis

    Directory of Open Access Journals (Sweden)

    Cheng-Chan Shih

    2016-01-01

    Full Text Available This paper proposed a new approach, combining root cause analysis (RCA, analytic hierarchy process (AHP, and event tree analysis (ETA in a loop to systematically evaluate various laboratory safety prevention strategies. First, 139 fire accidents were reviewed to identify the root causes and draw out prevention strategies. Most fires were caused due to runaway reactions, operation error and equipment failure, and flammable material release. These mostly occurred in working places of no prompt fire protection. We also used AHP to evaluate the priority of these strategies and found that chemical fire prevention strategy is the most important control element, and strengthening maintenance and safety inspection intensity is the most important action. Also together with our surveys results, we proposed that equipment design is also critical for fire prevention. Therefore a technical improvement was propounded: installing fire detector, automatic sprinkler, and manual extinguisher in the lab hood as proactive fire protections. ETA was then used as a tool to evaluate laboratory fire risks. The results indicated that the total risk of a fire occurring decreases from 0.0351 to 0.0042 without/with equipment taking actions. Establishing such system can make Environment, Health and Safety (EH&S office not only analyze and prioritize fire prevention policies more practically, but also demonstrate how effective protective equipment improvement can achieve and the probabilities of the initiating event developing into a serious accident or controlled by the existing safety system.

  1. Problematic internet use is associated with structural alterations in the brain reward system in females.

    Science.gov (United States)

    Altbäcker, Anna; Plózer, Enikő; Darnai, Gergely; Perlaki, Gábor; Horváth, Réka; Orsi, Gergely; Nagy, Szilvia Anett; Bogner, Péter; Schwarcz, Attila; Kovács, Norbert; Komoly, Sámuel; Clemens, Zsófia; Janszky, József

    2016-12-01

    Neuroimaging findings suggest that excessive Internet use shows functional and structural brain changes similar to substance addiction. Even though it is still under debate whether there are gender differences in case of problematic use, previous studies by-passed this question by focusing on males only or by using gender matched approach without controlling for potential gender effects. We designed our study to find out whether there are structural correlates in the brain reward system of problematic Internet use in habitual Internet user females. T1-weighted Magnetic Resonance (MR) images were collected in 82 healthy habitual Internet user females. Structural brain measures were investigated using both automated MR volumetry and voxel based morphometry (VBM). Self-reported measures of problematic Internet use and hours spent online were also assessed. According to MR volumetry, problematic Internet use was associated with increased grey matter volume of bilateral putamen and right nucleus accumbens while decreased grey matter volume of orbitofrontal cortex (OFC). Similarly, VBM analysis revealed a significant negative association between the absolute amount of grey matter OFC and problematic Internet use. Our findings suggest structural brain alterations in the reward system usually related to addictions are present in problematic Internet use.

  2. Systems and synthetic biology approaches to alter plant cell walls and reduce biomass recalcitrance.

    Science.gov (United States)

    Kalluri, Udaya C; Yin, Hengfu; Yang, Xiaohan; Davison, Brian H

    2014-12-01

    Fine-tuning plant cell wall properties to render plant biomass more amenable to biofuel conversion is a colossal challenge. A deep knowledge of the biosynthesis and regulation of plant cell wall and a high-precision genome engineering toolset are the two essential pillars of efforts to alter plant cell walls and reduce biomass recalcitrance. The past decade has seen a meteoric rise in use of transcriptomics and high-resolution imaging methods resulting in fresh insights into composition, structure, formation and deconstruction of plant cell walls. Subsequent gene manipulation approaches, however, commonly include ubiquitous mis-expression of a single candidate gene in a host that carries an intact copy of the native gene. The challenges posed by pleiotropic and unintended changes resulting from such an approach are moving the field towards synthetic biology approaches. Synthetic biology builds on a systems biology knowledge base and leverages high-precision tools for high-throughput assembly of multigene constructs and pathways, precision genome editing and site-specific gene stacking, silencing and/or removal. Here, we summarize the recent breakthroughs in biosynthesis and remodelling of major secondary cell wall components, assess the impediments in obtaining a systems-level understanding and explore the potential opportunities in leveraging synthetic biology approaches to reduce biomass recalcitrance.

  3. Microgravity-induced alterations in signal transduction in cells of the immune system

    Science.gov (United States)

    Paulsen, Katrin; Thiel, Cora; Timm, Johanna; Schmidt, Peter M.; Huber, Kathrin; Tauber, Svantje; Hemmersbach, Ruth; Seibt, Dieter; Kroll, Hartmut; Grote, Karl-Heinrich; Zipp, Frauke; Schneider-Stock, Regine; Cogoli, Augusto; Hilliger, Andre; Engelmann, Frank; Ullrich, Oliver

    2010-11-01

    Since decades it is known that the activity of cells of the immune system is severely dysregulated in microgravity, however, the underlying molecular aspects have not been elucidated yet. The identification of gravity-sensitive molecular mechanisms in cells of the immune system is an important and indispensable prerequisite for the development of counteractive measures to prevent or treat disturbed immune cell function of astronauts during long-term space missions. Moreover, their sensitivity to altered gravity renders immune cells an ideal model system to understand if and how gravity on Earth is required for normal mammalian cell function and signal transduction. We investigated the effect of simulated weightlessness (2D clinostat) and of real microgravity (parabolic flights) on key signal pathways in a human monocytic and a T lymphocyte cell line. We found that cellular responses to microgravity strongly depend on the cell-type and the conditions in which the cells are subjected to microgravity. In Jurkat T cells, enhanced phosphorylation of the MAP kinases ERK-1/2, MEK and p38 and inhibition of nuclear translocation of NF-kB were the predominant responses to simulated weightlessness, in either stimulated or non-stimulated cells. In contrast, non-stimulated monocytic U937 cells responded to simulated weightlessness with enhanced overall tyrosine-phosphorylation and activation of c-jun, whereas PMA-stimulated U937 cells responded the opposite way with reduced tyrosine-phosphorylation and reduced activation of c-jun, compared with PMA-stimulated 1 g controls. P53 protein was phosphorylated rapidly in microgravity. The identification of gravi-sensitive mechanisms in cells of the immune system will not only enable us to understand and prevent the negative effects of long time exposure to microgravity on Astronauts, but could also lead to novel therapeutic targets in general.

  4. Capturing Arabidopsis Root Architecture Dynamics with root-fit Reveals Diversity in Responses to Salinity

    NARCIS (Netherlands)

    Julkowska, M.M.; Hoefsloot, H.C.J.; Mol, S.; Feron, R.; de Boer, G.J.; Haring, M.A.; Testerink, C.

    2014-01-01

    The plant root is the first organ to encounter salinity stress, but the effect of salinity on root system architecture (RSA) remains elusive. Both the reduction in main root (MR) elongation and the redistribution of the root mass between MRs and lateral roots (LRs) are likely to play crucial roles i

  5. Effect of nutrient spray interval and light quality in root zone on growth characteristics of Anthurium andreanum L. in aeroponic system

    Directory of Open Access Journals (Sweden)

    M. Kafi

    2013-03-01

    Full Text Available In order to determine the most appropriate nutrient solution spraying interval and effects of light quality in the root zone on anthurium in aeroponic system, a split plot experiment, with completely randomized design, was carried out in a greenhouse located in the city of Karaj, Iran. In this study, time between the sprays was the main plot and consisted of two levels (2 minutes spray and 30 minutes without spray, and 2 minutes spray and 45 minutes without spray and color of the containers was the sub plot at three levels (black, blue and red. Results showed that 2 minutes spay and 45 minutes without spay increased number of leaves and shoot fresh weight much higher than 2 minutes spray and 30 minutes without spray. Study of light quality in the root zone showed that black color of the containers, by increasing total leaf area and shoot dry and fresh weight, was the best color treatment. Blue color in the root zone had the most influence on final root length; but was not able to increase root dry and fresh weight, because of higher number of roots in other color treatments. In general, spraying nutrient solution for two minutes, and 45 minutes without spray, along with black color containers in the root zone was the best treatment for most growth characteristics of the anthurium plant.

  6. Systemic control of cell division and endoreduplication by NAA and BAP by modulating CDKs in root tip cells of Allium cepa.

    Science.gov (United States)

    Tank, Jigna G; Thaker, Vrinda S

    2014-01-01

    Molecular mechanism regulated by auxin and cytokinin during endoreduplication, cell division, and elongation process is studied by using Allium cepa roots as a model system. The activity of CDK genes modulated by auxin and cytokinin during cell division, elongation, and endoreduplication process is explained in this research work. To study the significance of auxin and cytokinin in the management of cell division and endoreduplication process in plant meristematic cells at molecular level endoreduplication was developed in root tips of Allium cepa by giving colchicine treatment. There were inhibition of vegetative growth, formation of c-tumor at root tip, and development of endoreduplicated cells after colchicine treatment. This c-tumor was further treated with NAA and BAP to reinitiate vegetative growth in roots. BAP gave positive response in reinitiation of vegetative growth of roots from center of c-tumor. However, NAA gave negative response in reinitiation of vegetative growth of roots from c-tumor. Further, CDKs gene expression analysis from normal, endoreduplicated, and phytohormone (NAA or BAP) treated root tip was done and remarkable changes in transcription level of CDK genes in normal, endoreduplicated, and phytohormones treated cells were observed.

  7. Systemic Control of Cell Division and Endoreduplication by NAA and BAP by Modulating CDKs in Root Tip Cells of Allium cepa

    Directory of Open Access Journals (Sweden)

    Jigna G. Tank

    2014-01-01

    Full Text Available Molecular mechanism regulated by auxin and cytokinin during endoreduplication, cell division, and elongation process is studied by using Allium cepa roots as a model system. The activity of CDK genes modulated by auxin and cytokinin during cell division, elongation, and endoreduplication process is explained in this research work. To study the significance of auxin and cytokinin in the management of cell division and endoreduplication process in plant meristematic cells at molecular level endoreduplication was developed in root tips of Allium cepa by giving colchicine treatment. There were inhibition of vegetative growth, formation of c-tumor at root tip, and development of endoreduplicated cells after colchicine treatment. This c-tumor was further treated with NAA and BAP to reinitiate vegetative growth in roots. BAP gave positive response in reinitiation of vegetative growth of roots from center of c-tumor. However, NAA gave negative response in reinitiation of vegetative growth of roots from c-tumor. Further, CDKs gene expression analysis from normal, endoreduplicated, and phytohormone (NAA or BAP treated root tip was done and remarkable changes in transcription level of CDK genes in normal, endoreduplicated, and phytohormones treated cells were observed.

  8. Sistema radicular do fórmio, sisal e bambu imperial Root systems of new zealand flax, sisal, and imperial bamboo

    Directory of Open Access Journals (Sweden)

    Júlio César Medina

    1963-01-01

    Full Text Available Os autores apresentam e discutem os resultados de estudos preliminares sôbre o sistema radicular do fórmio (Phormium tenax Forster, sisal (Agave sisalana Perrine e bambu .imperial (Bambusa vulgaris Schrad. var. vittata A. ,& C, Riv.. Concluem, que o sistema radicular do fórmio é relativamente raso, o do sisal bastante superficial é o do bambu imperial se limitada às primeiras carnadas do solo.Results of preliminary studies on root-systems of New Zealand flax (Phormium tenax Forster, sisal (Agave sisalana Perrine, and imperial bamboo (Bambusa vulgaris Schrad. var. vittata A. & C. Riv. plants by the method of soil block, are apresented and discussed by the authors. According to local soil conditions, it is concluded that the root-system of New Zealand flax is relatively superficial, with the main concentration of roots in the 12 in. soil top layer. In sisal, the root-systems of the three plants investigated were found to occur in the soil surface layer, with more of 90% of the roots in the top 6 in. Finally, in the imperial bamboo clump atudied, the main concentration of roots was found in the layer 6-12 in. deep.

  9. Clinical evaluation of demineralization and remineralization of intact root surface lesions in the clinic by a quantitative light-induced fluorescence system.

    Science.gov (United States)

    Durmusoglu, Oykü; Tağtekin, Dilek Arslantunali; Yanikoğlu, Funda

    2012-03-01

    Detection of demineralization of root surface caries is an important issue since preventive approaches prolong tooth life. Quantitative light-induced fluorescence (QLF) has been shown to be useful for the laboratory assessment of demineralization of root surfaces. The aim of this study was to determine the demineralization and remineralization of root surface intact and cavitated caries lesions using a QLF system as a nondestructive in vivo method. Noncavitated and demineralized root surface lesions were detected and scored using the QLF system. Oral hygiene education was given and periodontal cleaning was completed before the remineralization treatment. After obtaining baseline QLF data, the patients were informed about the remineralization treatment. Fluoride varnish was applied to the carious lesions at the baseline visit, and the patients were then reviewed after 1, 2, 3 and 4 weeks, with QLF assessment and fluoride varnish application repeated at each review. Repeated-measures ANOVA (α = 0.05) showed significant differences between ΔQ values at each visit (p Bifluoride 12 varnish improved mineral levels as shown by the QLF system. The treatment response to chemicals of intact noncavitated root surface carious lesions could be followed nondestructively in the clinic using QLF to quantify remineralization at recall visits. Teeth with root surface caries can be kept by controlling their remineralization.

  10. High conversion self-curing sealer based on a novel injectable polyurethane system for root canal filling

    Energy Technology Data Exchange (ETDEWEB)

    Sun, Bin [Research Center for Nano-Biomaterials, Analytical and Testing Center, Sichuan University, Chengdu 610064 (China); Zuo, Yi, E-mail: zoae@scu.edu.cn [Research Center for Nano-Biomaterials, Analytical and Testing Center, Sichuan University, Chengdu 610064 (China); Li, Jidong; Wang, Li [Research Center for Nano-Biomaterials, Analytical and Testing Center, Sichuan University, Chengdu 610064 (China); Tang, Kuangyun [The State Key Laboratory of Oral Diseases and Orthognathic Surgery, Sichuan University West China College of Stomatology, Chengdu 610064 (China); Huang, Di; Du, Jingjing; Luo, Peipei; Li, Yubao [Research Center for Nano-Biomaterials, Analytical and Testing Center, Sichuan University, Chengdu 610064 (China)

    2013-08-01

    Low monomer–polymer conversion is the key factor leading to cytotoxicity for resin-containing restorative materials. This paper provides a new root canal filling system based on self-curing injectable polyurethane which can achieve high conversion in a short time. Traced FTIR spectra show more than 90% NCO group participated in the curing reaction after 4 h, and only about 5% remained after 24 h. The calculated data also testified the curing process supports a third-order reaction, and this efficient and sufficient reaction is postulated to weaken the toxic stimulation. By culturing with L929 murine fibroblasts, the PU sealer is shown to be favorable for cell attachment and proliferation. Then physicochemical properties of the injectable PU-based sealer were evaluated according to the Standard [ISO 6876:2001 (E)] for clinical application. A series of physicochemical properties of PU sealer have been tested comparing with AH Plus and Apexit Plus. And the results present that the self-curing PU sealer could not only match the clinic requirements, but even has better properties than the other two commercial sealers. We expect the high conversion PU sealer has a tremendous potential in the field of root canal filling after further biological evaluation. - Highlights: • A new root canal sealer based on self-curing injectable polyurethane was provided. • More than 90% NCO group reacted after 4h, and only about 5% remained after 24 h. • By culturing with L929 murine fibroblasts, the PU sealer showed perfect cytocompatibility. • Volumetric dilatancy after curing will make the sealer achieve a tight seal.

  11. Nod Factor Effects on Root Hair-Specific Transcriptome of Medicago truncatula: Focus on Plasma Membrane Transport Systems and Reactive Oxygen Species Networks.

    Science.gov (United States)

    Damiani, Isabelle; Drain, Alice; Guichard, Marjorie; Balzergue, Sandrine; Boscari, Alexandre; Boyer, Jean-Christophe; Brunaud, Véronique; Cottaz, Sylvain; Rancurel, Corinne; Da Rocha, Martine; Fizames, Cécile; Fort, Sébastien; Gaillard, Isabelle; Maillol, Vincent; Danchin, Etienne G J; Rouached, Hatem; Samain, Eric; Su, Yan-Hua; Thouin, Julien; Touraine, Bruno; Puppo, Alain; Frachisse, Jean-Marie; Pauly, Nicolas; Sentenac, Hervé

    2016-01-01

    Root hairs are involved in water and nutrient uptake, and thereby in plant autotrophy. In legumes, they also play a crucial role in establishment of rhizobial symbiosis. To obtain a holistic view of Medicago truncatula genes expressed in root hairs and of their regulation during the first hours of the engagement in rhizobial symbiotic interaction, a high throughput RNA sequencing on isolated root hairs from roots challenged or not with lipochitooligosaccharides Nod factors (NF) for 4 or 20 h was carried out. This provided a repertoire of genes displaying expression in root hairs, responding or not to NF, and specific or not to legumes. In analyzing the transcriptome dataset, special attention was paid to pumps, transporters, or channels active at the plasma membrane, to other proteins likely to play a role in nutrient ion uptake, NF electrical and calcium signaling, control of the redox status or the dynamic reprogramming of root hair transcriptome induced by NF treatment, and to the identification of papilionoid legume-specific genes expressed in root hairs. About 10% of the root hair expressed genes were significantly up- or down-regulated by NF treatment, suggesting their involvement in remodeling plant functions to allow establishment of the symbiotic relationship. For instance, NF-induced changes in expression of genes encoding plasma membrane transport systems or disease response proteins indicate that root hairs reduce their involvement in nutrient ion absorption and adapt their immune system in order to engage in the symbiotic interaction. It also appears that the redox status of root hair cells is tuned in response to NF perception. In addition, 1176 genes that could be considered as "papilionoid legume-specific" were identified in the M. truncatula root hair transcriptome, from which 141 were found to possess an ortholog in every of the six legume genomes that we considered, suggesting their involvement in essential functions specific to legumes. This

  12. Nod factor effects on root hair-specific transcriptome of Medicago truncatula: focus on plasma membrane transport systems and reactive oxygen species networks

    Directory of Open Access Journals (Sweden)

    Isabelle eDAMIANI

    2016-06-01

    Full Text Available Root hairs are involved in water and nutrient uptake, and thereby in plant autotrophy. In legumes, they also play a crucial role in establishment of rhizobial symbiosis. To obtain a holistic view of Medicago truncatula genes expressed in root hairs and of their regulation during the first hours of the engagement in rhizobial symbiotic interaction, a high throughput RNA sequencing on isolated root hairs from roots challenged or not with lipochitooligosaccharides Nod factors (NF for 4 h or 20 h was carried out. This provided a repertoire of genes displaying expression in root hairs, responding or not to NF and specific or not to legumes. In analyzing the transcriptome dataset, special attention was paid to pumps, transporters or channels active at the plasma membrane, to other proteins likely to play a role in nutrient ion uptake, NF electrical and calcium signaling, control of the redox status or the dynamic reprogramming of root hair transcriptome induced by NF treatment, and to the identification of papilionoid legume-specific genes expressed in root hairs. About 10 percent of the root hair expressed genes were significantly up- or down-regulated by NF treatment, suggesting their involvement in remodeling plant functions to allow establishment of the symbiotic relationship. For instance, NF-induced changes in expression of genes encoding plasma membrane transport systems or disease response proteins indicate that root hairs reduce their involvement in nutrient ion absorption and adapt their immune system in order to engage in the symbiotic interaction. It also appears that the redox status of root hair cells is tuned in response to NF perception. In addition, 1,176 genes that could be considered as papilionoid legume-specific were identified in the M. truncatula root hair transcriptome, from which 141 were found to possess an orthologue in every of the 6 legume genomes that we considered, suggesting their involvement in essential functions

  13. Root resorption

    DEFF Research Database (Denmark)

    Kjaer, Inger

    2014-01-01

    Introduction: This paper summarizes the different conditions, which have a well-known influence on the resorption of tooth roots, exemplified by trauma and orthodontic treatment. The concept of the paper is to summarize and explain symptoms and signs of importance for avoiding resorption during...... orthodontic treatment. The Hypothesis: The hypothesis in this paper is that three different tissue layers covering the root in the so-called periroot sheet can explain signs and symptoms of importance for avoiding root resorption during orthodontic treatment. These different tissue layers are; outermost...... processes provoked by trauma and orthodontic pressure. Inflammatory reactions are followed by resorptive processes in the periroot sheet and along the root surface. Evaluation of the Hypothesis: Different morphologies in the dentition are signs of abnormal epithelium or an abnormal mesodermal layer. It has...

  14. Induction of ELF transmembrane potentials in relation to power-frequency electric field bioeffects in a plant root model system. Pt. 2. The effect of 60 Hz electric fields on the growth of different regions of the cucurbit root elongation zone

    Energy Technology Data Exchange (ETDEWEB)

    Brayman, A.A.; Miller, M.W.; Brulfert, A.

    1986-08-01

    The region of elongation in Cucumis sativus and Cucurbita maxima roots was marked at increasing distances from the apex to provide an analog of increasing cell size. These roots were exposed/sham-exposed to 60 Hz electric fields and the growth rates of the root segments measured. The growth rate effect magnitude varied with increasing distance from the root tip at constant field strength, and with increasing applied field strength. These results provide strong, qualitative support for the postulate that ELF transmembrane potential induction is involved in the stimulation of ELF electric field effects in the plant root model system.

  15. Fungal communities in mycorrhizal roots of conifer seedlings in forest nurseries under different cultivation systems, assessed by morphotyping, direct sequencing and mycelial isolation.

    Science.gov (United States)

    Menkis, Audrius; Vasiliauskas, Rimvydas; Taylor, Andrew F S; Stenlid, Jan; Finlay, Roger

    2005-12-01

    Fungi colonising root tips of Pinus sylvestris and Picea abies grown under four different seedling cultivation systems were assessed by morphotyping, direct sequencing and isolation methods. Roots were morphotyped using two approaches: (1) 10% of the whole root system from 30 seedlings of each species and (2) 20 randomly selected tips per plant from 300 seedlings of each species. The first approach yielded 15 morphotypes, the second yielded 27, including 18 new morphotypes. The overall community consisted of 33 morphotypes. The level of mycorrhizal colonisation of roots determined by each approach was about 50%. The cultivation system had a marked effect on the level of mycorrhizal colonisation. In pine, the highest level of colonisation (48%) was observed in bare-root systems, while in spruce, colonisation was highest in polyethylene rolls (71%). Direct internal transcribed spacer ribosomal DNA sequencing and isolation detected a total of 93 fungal taxa, including 27 mycorrhizal. A total of 71 (76.3%) fungi were identified at least to a genus level. The overlap between the two methods was low. Only 13 (13.9%) of taxa were both sequenced and isolated, 47 (50.5%) were detected exclusively by sequencing and 33 (35.5%) exclusively by isolation. All isolated mycorrhizal fungi were also detected by direct sequencing. Characteristic mycorrhizas were Phialophora finlandia, Amphinema byssoides, Rhizopogon rubescens, Suillus luteus and Thelephora terrestris. There was a moderate similarity in mycorrhizal communities between pine and spruce and among different cultivation systems.

  16. Alterations in the Medullary Endocannabinoid System Contribute to Age-related Impairment of Baroreflex Sensitivity.

    Science.gov (United States)

    Schaich, Chris L; Shaltout, Hossam A; Grabenauer, Megan; Thomas, Brian F; Gallagher, Patricia E; Howlett, Allyn C; Diz, Debra I

    2015-05-01

    As they age, Sprague-Dawley (SD) rats develop elevated systolic blood pressure associated with impaired baroreflex sensitivity (BRS) for control of heart rate. We previously demonstrated in young hypertensive (mRen2)27 rats that impaired BRS is restored by CB1 cannabinoid receptor blockade in the solitary tract nucleus (NTS), consistent with elevated content of the endocannabinoid 2-arachidonoylglycerol (2-AG) in dorsal medulla relative to normotensive SD rats. There is no effect of CB1 receptor blockade in young SD rats. We now report in older SD rats that dorsal medullary 2-AG levels are 2-fold higher at 70 versus 15 weeks of age (4.22 ± 0.61 vs. 1.93 ± 0.22 ng/mg tissue; P < 0.05). Furthermore, relative expression of CB1 receptor messenger RNA is significantly lower in aged rats, whereas CB2 receptor messenger RNA is significantly higher. In contrast to young adult SD rats, microinjection of the CB1 receptor antagonist SR141716A (36 pmole) into the NTS of older SD rats normalized BRS in animals exhibiting impaired baseline BRS (0.56 ± 0.06 baseline vs. 1.06 ± 0.05 ms/mm Hg after 60 minutes; P < 0.05). Therefore, this study provides evidence for alterations in the endocannabinoid system within the NTS of older SD rats that contribute to age-related impairment of BRS.

  17. Urine proteomes of healthy aging humans reveal extracellular matrix (ECM) alterations and immune system dysfunction.

    Science.gov (United States)

    Bakun, M; Senatorski, G; Rubel, T; Lukasik, A; Zielenkiewicz, P; Dadlez, M; Paczek, L

    2014-02-01

    Aging is a complex physiological process that poses considerable conundrums to rapidly aging societies. For example, the risk of dying from cardiovascular diseases and/or cancer steadily declines for people after their 60s, and other causes of death predominate for seniors older than 80 years of age. Thus, physiological aging presents numerous unanswered questions, particularly with regard to changing metabolic patterns. Urine proteomics analysis is becoming a non-invasive and reproducible diagnostic method. We investigated the urine proteomes in healthy elderly people to determine which metabolic processes were weakened or strengthened in aging humans. Urine samples from 37 healthy volunteers aged 19-90 years (19 men, 18 women) were analyzed for protein expression by liquid chromatography-tandem mass spectrometry. This generated a list of 19 proteins that were differentially expressed in different age groups (young, intermediate, and old age). In particular, the oldest group showed protein changes reflective of altered extracellular matrix turnover and declining immune function, in which changes corresponded to reported changes in cardiovascular tissue remodeling and immune disorders in the elderly. Thus, urinary proteome changes in the elderly appear to reflect the physiological processes of aging and are particularly clearly represented in the circulatory and immune systems. Detailed identification of "protein trails" creates a more global picture of metabolic changes that occur in the elderly.

  18. PLANT MICROBIOME. Salicylic acid modulates colonization of the root microbiome by specific bacterial taxa.

    Science.gov (United States)

    Lebeis, Sarah L; Paredes, Sur Herrera; Lundberg, Derek S; Breakfield, Natalie; Gehring, Jase; McDonald, Meredith; Malfatti, Stephanie; Glavina del Rio, Tijana; Jones, Corbin D; Tringe, Susannah G; Dangl, Jeffery L

    2015-08-21

    Immune systems distinguish "self" from "nonself" to maintain homeostasis and must differentially gate access to allow colonization by potentially beneficial, nonpathogenic microbes. Plant roots grow within extremely diverse soil microbial communities but assemble a taxonomically limited root-associated microbiome. We grew isogenic Arabidopsis thaliana mutants with altered immune systems in a wild soil and also in recolonization experiments with a synthetic bacterial community. We established that biosynthesis of, and signaling dependent on, the foliar defense phytohormone salicylic acid is required to assemble a normal root microbiome. Salicylic acid modulates colonization of the root by specific bacterial families. Thus, plant immune signaling drives selection from the available microbial communities to sculpt the root microbiome.

  19. Water Velocity and Bioturbation Alter Sediment Resuspension and Biogeochemistry in an Experimental Freshwater Mesocosm System

    Science.gov (United States)

    Spivak, A.; Vanni, M. J.

    2010-12-01

    Processes such as bioturbation and resuspension can affect organic matter decomposition by altering sediment redox conditions. Increased oxygen availability may, in turn, affect remineralization rates and larger scale processes such as benthic-pelagic coupling. However, relatively few studies have explicitly tested the simultaneous effects of bioturbation and water velocity on benthic biogeochemistry and sediment resuspension. Using a mesocosm system we conducted two experiments testing the effects of bioturbator identity on particulate and dissolved nutrient dynamics before and after a resuspension event (i.e. water velocity held constant at 0.12 m s-1 for 2 hr; Expt. 1) and rates of sediment resuspension with increasing water velocity (0.00 - 0.20 m s-1; Expt. 2). We manipulated bioturbator identity across four levels as sediments were undisturbed (control), manually punctured (2% of surface area), or disturbed by one of two fish species, either bluegill or catfish. For Expt. 1, the bioturbation treatments were applied for several days and measurements were made before and after the resuspension event. Initially, water column chlorophyll and total suspended sediment (TSS) concentrations were highest in the catfish treatments. Bioturbator identity did not affect the stoichiometry of TSS as strongly; C:N was unaffected by our treatments while N:P was lowest in the disturbed treatments. After the resuspension event, there was no difference in TSS concentrations or stoichiometric ratios across the bioturbation treatments. Dissolved nutrient flux rates were insensitive to the bioturbation treatments and were more strongly influenced by the resuspension event. For instance, sediment NO3- fluxes were negative (i.e. net flux into sediments) until after the resuspension event when they became positive. In Expt. 2, we gradually increased water velocity from 0.00 - 0.20 m s-1 and measured TSS concentrations only. TSS was initially highest in catfish treatments and lowest in

  20. Numerical Models of Human Circulatory System under Altered Gravity: Brain Circulation

    Science.gov (United States)

    Kim, Chang Sung; Kiris, Cetin; Kwak, Dochan; David, Tim

    2003-01-01

    A computational fluid dynamics (CFD) approach is presented to model the blood flow through the human circulatory system under altered gravity conditions. Models required for CFD simulation relevant to major hemodynamic issues are introduced such as non-Newtonian flow models governed by red blood cells, a model for arterial wall motion due to fluid-wall interactions, a vascular bed model for outflow boundary conditions, and a model for auto-regulation mechanism. The three-dimensional unsteady incompressible Navier-Stokes equations coupled with these models are solved iteratively using the pseudocompressibility method and dual time stepping. Moving wall boundary conditions from the first-order fluid-wall interaction model are used to study the influence of arterial wall distensibility on flow patterns and wall shear stresses during the heart pulse. A vascular bed modeling utilizing the analogy with electric circuits is coupled with an auto-regulation algorithm for multiple outflow boundaries. For the treatment of complex geometry, a chimera overset grid technique is adopted to obtain connectivity between arterial branches. For code validation, computed results are compared with experimental data for steady and unsteady non-Newtonian flows. Good agreement is obtained for both cases. In sin-type Gravity Benchmark Problems, gravity source terms are added to the Navier-Stokes equations to study the effect of gravitational variation on the human circulatory system. This computational approach is then applied to localized blood flows through a realistic carotid bifurcation and two Circle of Willis models, one using an idealized geometry and the other model using an anatomical data set. A three- dimensional anatomical Circle of Willis configuration is reconstructed from human-specific magnetic resonance images using an image segmentation method. The blood flow through these Circle of Willis models is simulated to provide means for studying gravitational effects on the brain

  1. Wfs1-deficient mice display altered function of serotonergic system and increased behavioural response to antidepressants

    Directory of Open Access Journals (Sweden)

    Tanel eVisnapuu

    2013-07-01

    Full Text Available It has been shown that mutations in the WFS1 gene make humans more susceptible to mood disorders. Besides that, mood disorders are associated with alterations in the activity of serotonergic and noradrenergic systems. Therefore, in this study, the effects of imipramine, an inhibitor of serotonin (5-HT and noradrenaline (NA reuptake, and paroxetine, a selective inhibitor of 5-HT reuptake, were studied in tests of behavioural despair. The tail suspension test (TST and forced swimming test (FST were performed in Wfs1-deficient mice. Simultaneously, gene expression and monoamine metabolism studies were conducted to evaluate changes in 5-HT- and NA-ergic systems of Wfs1-deficient mice. The basal immobility time of Wfs1-deficient mice in TST and FST did not differ from that of their wild-type littermates. However, a significant reduction of immobility time in response to lower doses of imipramine and paroxetine was observed in homozygous Wfs1-deficient mice, but not in their wild-type littermates. In gene expression studies, the levels of 5-HT transporter (SERT were significantly reduced in the pons of homozygous animals. Monoamine metabolism was assayed separately in the dorsal and ventral striatum of naive mice and mice exposed for 30 minutes tobrightly lit motility boxes. We found that this aversive challenge caused a significant increase in the levels of 5-HT and 5-hydroxyindoleacetic acid (5-HIAA, a metabolite of 5-HT, in the ventral and dorsal striatum of wild-type mice, but not in their homozygous littermates. Taken together, the blunted 5-HT metabolism and reduced levels of SERT are a likely reason for the elevated sensitivity of these mice to the action of imipramine and paroxetine. These changes in the pharmacological and neurochemical phenotype of Wfs1-deficient mice may help to explain the increased susceptibility of Wolfram syndrome patients to depressive states.

  2. Phenotypic Alterations Involved in CD8+ Treg Impairment in Systemic Sclerosis.

    Science.gov (United States)

    Negrini, Simone; Fenoglio, Daniela; Parodi, Alessia; Kalli, Francesca; Battaglia, Florinda; Nasi, Giorgia; Curto, Monica; Tardito, Samuele; Ferrera, Francesca; Filaci, Gilberto

    2017-01-01

    Systemic sclerosis (SSc) is a connective tissue disease characterized by tissue fibrosis, vasculopathy, and autoimmunity. Although the exact pathogenetic mechanisms behind SSc remain to be fully elucidated, a great deal of evidence suggests the existence of an unbalanced ratio between the effector and regulatory arms of the immune system. With regard to the T regulatory (Treg) compartment, we observed that CD8+ Treg subsets display functional defects in SSc-affected patients. Since CD127 down-modulation and CD39 upregulation have been observed on Treg subsets, the phenotypic expression of these molecules was analyzed on the CD8+CD28- Treg precursors and on CD8+ Treg cells generated in vitro through interleukin-10 commitment. Immunophenotypic data from SSc patients were compared to those obtained from healthy subjects. The analyses performed on ex vivo-isolated CD8+CD28- Treg precursors did not show any significant differences in CD39 or CD127 expression as compared to values obtained from healthy donors. On the contrary, in vitro-generated CD8+ Tregs obtained from SSc patients displayed reduced expression of the CD39 molecule as compared to controls. Moreover, the percentage of CD127+ cells was significantly higher in in vitro-generated CD8+ Tregs from SSc patients compared to CD8+ Tregs obtained from healthy donors. Taken together, these findings may indicate an impairment of maturation processes affecting CD8+ Treg cells in SSc patients. This impairment of maturation involves phenotypic alterations that are mainly characterized by a deficient CD39 upregulation and a lack of down-modulation of the CD127 molecule.

  3. Fungal pathogens and antagonists in root-soil zone in organic and integrated systems of potato production

    Directory of Open Access Journals (Sweden)

    Lenc Leszek

    2016-04-01

    Full Text Available Occurrence of culturable Fungi and Oomycota in root-soil habitat of potato cv. Owacja in organic and integrated production systems at Osiny (northern Poland was compared in 2008-2010. The densities of both pathogens were significantly greater in the organic system. The eudominant fungal taxa (with frequency > 10% in at least one habitat included species of Fusarium + Gibberella + Haematonectria, Penicillium, Phoma and Trichoderma. The dominant taxa (with frequency 5-10% included species from 13 genera. In the rhizoplane, rhizosphere and non-rhizosphere soil, the total density of potential pathogens was greater in the integrated system, and of potential antagonists in the organic system. Among eudominant and dominant pathogens, Fusarium oxysporum and Gibellulopsis nigrescens occurred at greater density in the integrated system and Haematonectria haematococca and Phoma spp. in the organic system. Among eudominant antagonists, Trichoderma species occurred at greater density in the organic system. The organic system provided more disease suppressive habitat than the integrated system. The occurrence of brown leaf spot and potato blight was however similar in both systems. The mean yield of organic potatoes (24.9 t · ha-1 was higher than the mean organic potato yield in Poland (21.0 t · ha-1 and similar to the mean in other European countries (Germany 25.1 t · ha-1, Great Britain 25.0 t · ha-1. The organic system, based on a 5-year rotation, with narrow-leafed lupin, white mustard and buckwheat as a cover crop, inorganic fertilization based on ground rock phosphate + potassium sulphate, and biological and chemical control of insects and diseases (Bacillus thuringiensis ssp. tenebrionis + copper hydroxide + copper oxychloride, may be recommended for use in central Europe.

  4. Adaptations of the vestibular system to short and long-term exposures to altered gravity

    Science.gov (United States)

    Bruce, L.

    Long-term space flight creates unique environmental conditions to which the vestibular system must adapt for optimal survival. We are studying two aspects of this vestibular adaptation: (1) How does long-term exposure to microgravity and hypergravity affect the development of vestibular afferents? (2) How does short- term exposure to extremely rapid changes in gravity, such as those that occur during launch and landing, affect the vestibular system. During space flight the gravistatic receptors in the otolith organs are effectively unloaded. In hypergravity conditions they are overloaded. However, the angular acceleration receptors of the semicircular canals receive relatively normal stimulation in both micro- and hypergravity.Rat embryos exposed to microgravity from gestation day 10 (prior to vestibular function) until gestation day 20 (vestibular system is somewhat functional) showed that afferents from the posterior vertical canal projecting to the medial vestibular nucleus developed similarly in microgravity, hypergravity, and in controls . However, afferents from the saccule showed delayed development in microgravity as compared to development in hypergravity and in controls. Cerebellar plasticity is crucial for modification of sensory-motor control and learning. Thus we explored the possibility that strong vestibular stimuli would modify cerebellar motor control (i.e., eye movement, postural control, gut motility) by altering the morphology of cerebellar Purkinje cells. To study the effects of short-term exposures to strong vestibular stimuli we focused on structural changes in the vestibulo-cerebellum that are caused by strong vestibular stimuli. Adult mice were exposed to various combinations of constant and/or rapidly changing angular and linear accelerations for 8.5 min (the time length of shuttle launch). Our data shows that these stimuli cause intense excitation of cerebellar Purkinje cells, inducing up-regulation of clathrin-mediated endocytosis

  5. 78 FR 77255 - Privacy Act of 1974; Notice of Republication and Alteration of Systems of Records Notices (SORNs)

    Science.gov (United States)

    2013-12-20

    ... December 20, 2013 Part III National Archives and Records Administration Privacy Act of 1974; Notice of... Act of 1974; Notice of Republication and Alteration of Systems of Records Notices (SORNs) AGENCY... records and its SORNs, in compliance with the provisions of the Privacy Act of 1974, as amended (5...

  6. A multi-faceted approach to characterize acid-sulfate alteration processes in volcanic hydrothermal systems on Earth and Mars

    Science.gov (United States)

    Marcucci, Emma Cordts

    Acid-sulfate alteration is a dominant weathering process in high temperature, low pH, sulfur-rich volcanic environments. Additionally, hydrothermal environments have been proposed as locations where life could have originated on Earth. Based on the extensive evidence of flowing surface water and persistent volcanism, similar locations and processes could have existed on early Mars. Globally observed alteration mineral assemblages likely represent relic Martian hydrothermal settings. Yet the limited understanding of environmental controls, limits the confidence of interpreting the paleoconditions of these hydrothermal systems and assessing their habitability to support microbial life. This thesis presents a series of laboratory experiments, geochemical models, analog fieldwork, and Martian remote sensing to characterize distinguishing features and controls of acid-sulfate alteration. The experiments and models were designed to replicate alteration is a highly acidic, sulfurous, and hot field sites. The basaltic minerals were individually reacted in both experimental and model simulations with varying initial parameters to infer the geochemical pathways of acid-sulfate alteration on Earth and Mars. It was found that for a specific starting material, secondary mineralogies were consistent. Variations in pH, temperature and duration affected the abundance, shape, and size of mineral products. Additionally evaporation played a key role in secondary deposits; therefore, both alteration and evaporitic processes need to be taken into consideration. Analog volcanic sites in Nicaragua were used to supplement this work and highlight differences between natural and simulated alteration. In situ visible near-infrared spectroscopy demonstrated that primary lithology and gas chemistry were dominant controls of alteration, with secondary effects from environmental controls, such as temperature and pH. The spectroscopic research from the field was directly related to Mars

  7. Cyber-physical production systems: Roots from manufacturing science and technology

    OpenAIRE

    Monostori, L.

    2015-01-01

    One of the most significant directions in the development of computer science and information and communication technologies is represented by Cyber-Physical Systems (CPS) which are systems of collaborating computational entities which are in intensive connection with the surrounding physical world and its on-going processes, providing and using, at the same time, data-accessing and data-processing services available on the internet. Cyber-Physical Production Systems (CPPS), relying on the ne...

  8. Repeated dexamphetamine treatment alters the dopaminergic system and increases the phMRI response to methylphenidate

    Science.gov (United States)

    Schrantee, Anouk; Tremoleda, Jordi L.; Wylezinska-Arridge, Marzena; Bouet, Valentine; Hesseling, Peter; Meerhoff, Gideon F.; de Bruin, Kora M.; Koeleman, Jan; Freret, Thomas; Boulouard, Michel; Desfosses, Emilie; Galineau, Laurent; Gozzi, Alessandro; Dauphin, François; Gsell, Willy; Booij, Jan; Lucassen, Paul J.; Reneman, Liesbeth

    2017-01-01

    Dexamphetamine (AMPH) is a psychostimulant drug that is used both recreationally and as medication for attention deficit hyperactivity disorder. Preclinical studies have demonstrated that repeated exposure to AMPH can induce damage to nerve terminals of dopamine (DA) neurons. We here assessed the underlying neurobiological changes in the DA system following repeated AMPH exposure and pre-treated rats with AMPH or saline (4 times 5 mg/kg s.c., 2 hours apart), followed by a 1-week washout period. We then used pharmacological MRI (phMRI) with a methylphenidate (MPH) challenge, as a sensitive and non-invasive in-vivo measure of DAergic function. We subsequently validated the DA-ergic changes post-mortem, using a.o. high-performance liquid chromatography (HPLC) and autoradiography. In the AMPH pre-treated group, we observed a significantly larger BOLD response to the MPH challenge, particularly in DA-ergic brain areas and their downstream projections. Subsequent autoradiography studies showed that AMPH pre-treatment significantly reduced DA transporter (DAT) density in the caudate-putamen (CPu) and nucleus accumbens, whereas HPLC analysis revealed increases in the DA metabolite homovanillic acid in the CPu. Our results suggest that AMPH pre-treatment alters DAergic responsivity, a change that can be detected with phMRI in rats. These phMRI changes likely reflect increased DA release together with reduced DAT binding. The ability to assess subtle synaptic changes using phMRI is promising for both preclinical studies of drug discovery, and for clinical studies where phMRI can be a useful tool to non-invasively investigate DA abnormalities, e.g. in neuropsychiatric disorders. PMID:28241065

  9. On the sputter alteration of regoliths of outer solar system bodies

    Science.gov (United States)

    Hapke, Bruce

    1987-01-01

    Several processes that are expected to occur when the porous regoliths of outer solar system bodies (without atmospheres) are subjected to energetic ion bombardment are discussed. The conclusions reached in much of the literature addressing sputtering are quantitatively or qualitatively incorrect because effects of soil porosity have been neglected. It is shown theoretically and experimentally that porosity reduces the effective sputtering yield of a soil by more than an order of magnitude. Between 90 and 97% of the sputtered atoms are trapped within the regolith, where they are factionated by differential desorption. Experiments indicate that more volatile species have higher desorption probabilities. This process is the most important way in which alteration of chemical and optical properties occurs when a regolith is sputtered. When a basic silicate soil is irradiated these effects lead to sputter-deposited films enriched in metallic iron, while O, Na and K are preferentially lost. The Na and K are present in the atmosphere above the sputtered silicate in quantities much greater than their abundances in the regolith. Icy regoliths of SO2 should be enriched in elemental S and/or S2O. This prediction is supported by the probable identification of S2O and polysulfur oxide bands in the IR spectra of H-sputtered SO2 reported by Moore. When porous mixtures of water, ammonia and methane frosts are sputtered, the loss of H and surface reactions of C, N and O in the deposits should produce complex hydrocarbons and carbohydrates, some of which may be quite dark. Such reactions may have played a role in the formation of the matrix material of carbonaceous chondrites prior to agglomeration.

  10. Computed Tomography Evaluation of Canal Transportation and Volumetric Changes in Root Canal Dentin of Curved Canals Using Mtwo, ProTaper and ProTaper Next Rotary System-An In-vitro Study

    Science.gov (United States)

    Shivashankar, Mayuri Biccodu; Jayasheel, Arun; Kenchanagoudra, Mallikarjun Goud

    2016-01-01

    Introduction Complete cleaning and shaping of root canal system is of paramount importance to achieve a successful root canal treatment. There are various rotary Ni-Ti systems available in the market to achieve mechanical goal of root canal preparation. But aggressive preparation of root canal with such systems would result in canal transportation and excess root dentin removal that would be one of the major reasons to decide the prognosis of root canal treated tooth. Aim The present study was conducted to compare the root canal preparation in terms of canal transportation and volumetric changes in the root canal dentin among three Ni-Ti file systems, namely Mtwo, ProTaper (PT) and ProTaper NEXT (PTN) file system, using Computed Tomography (CT). Materials and Methods A total of 45 mesiobuccal root canals of extracted first molar teeth with completely formed root apices and angle of curvature ranging between 10°- 35° were selected. These teeth were randomly divided into three experimental groups containing 15 teeth each, based on rotary system used. Group-I: Mtwo files, Group-II: PT files and Group-III: PTN files. Pre-instrumentation CT images were obtained at three cross-sectional planes – 3mm, 7mm and 11mm from apical end of the root. Similarly, post-instrumentation images were obtained. Shortest distance from the edge of the canal to the periphery of the root was analyzed by using Analysis of Variance. Results All three file systems tested in the present study presented similar behaviour with respect to the root canal transportation. Lesser canal transportation was recorded in Mtwo. But no statistically significant difference was seen in terms of canal transportation and volume of dentin removed between all three rotary systems (p>0.05). Conclusion Mtwo, PT and PTN rotary systems have similar behaviour with respect to canal transportation and volume of dentin removed. PMID:28050495

  11. A comparative evaluation of root canal area increase using three different nickel-titanium rotary systems: An ex vivo cone-beam computed tomographic analysis

    Directory of Open Access Journals (Sweden)

    Adrija Deka

    2015-01-01

    Full Text Available Background and Objectives: The present study was undertaken to compare and evaluate the area increase of root canals with ProTaper, iRaCe and Revo-S systems using cone beam computed tomography for analysis. Materials and Methodology: Forty five extracted human mandibular premolars having single canal and straight root were collected. Teeth were randomly assigned to three groups (n=15. Samples were decoronized by maintaining root length at 14 mm. Pre-instrumentation cone beam computed tomography scan was done after stabilizing the samples on wax blocks. The working length was determined at 1 mm short from the apical foramen by using a ISO 15 K-file tip protruding at apical foramen. Preparation was carried out according to the manufacturer′s instructions. Finally, canals were instrumented upto 30/.06 apically for each group. After each instrumentation, root canals were irrigated with 2ml of 3% sodium hypochlorite solution followed by 2 ml of 17% EDTA solution. Final irrigation was done with 5ml of saline. Post instrumentation cone beam computed tomography scans of all samples in the 3 groups were acquired. Results: Mean percentage of area increase in different thirds of the canal was highest for ProTaper followed by i-RaCe and Revo-s system which was statistically significant. Interpretation and Conclusion: Root canal area increase was highest for ProTaper followed by i-Race and Revo-S systems.

  12. Evolution of Root Characters of Soybean Varieties Developed in Different Years

    Institute of Scientific and Technical Information of China (English)

    YANG Xiu-hong; WU Zong-pu; ZHANG Guo-dong

    2002-01-01

    It was studied that the evolution of root characteristics among 42 soybean varieties developed in Heilongjiang and Jilin Province in different years. The results showed that there were differences on the root characteristics among soybean varieties. From 1950s to 1990s, root fresh weight, root volume, root surface, root dry weight, lateral root length of main root characters tendedly increased with the variable development years. The root system of the varieties in 1990s was relatively well developed compared with that in the other years. The evolutionary trend of the root system of soybean varieties was increasing in root weight, root volume, root surface and length of lateral root.

  13. Touch and gravitropic set-point angle interact to modulate gravitropic growth in roots

    Science.gov (United States)

    Massa, G. D.; Gilroy, S.

    2003-01-01

    Plant roots must sense and respond to a variety of environmental stimuli as they grow through the soil. Touch and gravity represent two of the mechanical signals that roots must integrate to elicit the appropriate root growth patterns and root system architecture. Obstacles such as rocks will impede the general downwardly directed gravitropic growth of the root system and so these soil features must be sensed and this information processed for an appropriate alteration in gravitropic growth to allow the root to avoid the obstruction. We show that primary and lateral roots of Arabidopsis do appear to sense and respond to mechanical barriers placed in their path of growth in a qualitatively similar fashion. Both types of roots exhibited a differential growth response upon contacting the obstacle that directed the main axis of elongation parallel to the barrier. This growth habit was maintained until the obstacle was circumvented, at which point normal gravitropic growth was resumed. Thus, the gravitational set-point angle of the primary and lateral roots prior to encountering the barrier were 95 degrees and 136 degrees respectively and after growing off the end of the obstacle identical set-point angles were reinstated. However, whilst tracking across the barrier, quantitative differences in response were observed between these two classes of roots. The root tip of the primary root maintained an angle of 136 degrees to the horizontal as it traversed the barrier whereas the lateral roots adopted an angle of 154 degrees. Thus, this root tip angle appeared dependent on the gravitropic set-point angle of the root type with the difference in tracking angle quantitatively reflecting differences in initial set-point angle. Concave and convex barriers were also used to analyze the response of the root to tracking along a continuously varying surface. The roots maintained the a fairly fixed angle to gravity on the curved surface implying a constant resetting of this tip angle

  14. 一种构建嵌入式Linux根文件系统的方法%A method of building embedded Linux root file system

    Institute of Scientific and Technical Information of China (English)

    刘二钢

    2016-01-01

    根文件系统是构建嵌入式Linux系统的非常重要的组成部分。文中主要以制作Yaffs2根文件系统为例,研究如何使用BusyBox构建嵌入式Linux的根文件系统,包括BusyBox的配置、编译和安装,以及在嵌入式Linux环境下生成根文件系统映像文件的方法。文中所介绍的方法能够成功地在ARM开发板中移植和运行,为嵌入式系统的开发提出了一种简单易行的研究思路。%The root file system is a very important part of building the embedded Linux system. This paper mainly makes Yaffs2 root file system as an example of studying how to use the BusyBox to build embedded Linux root file system, including the BusyBox configuration, compilation and installation, and generates the system image files of root file in the embedded Linux environment. The method introduced in the paper is able to transplant and run successfully in the ARM development board, and puts forward a kind of feasible research ideas for the development of embedded system.

  15. Investigation and Improvement of Grass-roots Agricultural Extension System in Yichang City

    OpenAIRE

    Yi, Jiping; Xu, Yan; Hu, Duan'e; Xiang, Changwen

    2013-01-01

    Through a questionnaire survey, the working status, payment and ideological conditions of 166 grassroots agro-technicians were studied and analyzed. As is indicated by the results, the technicians are generally paid with low wages, and lack enthusiasm and initiative in jobs, and most of them take a second job. After an expose of the existing problems in the grassroots agricultural extension system in Yichang, some suggestions were proposed for improving the agricultural extension system in th...

  16. Investigation and Improvement of Grass-roots Agricultural Extension System in Yichang City

    Institute of Scientific and Technical Information of China (English)

    Jiping; YI; Yan; XU; Duan’e; HU; Changwen; XIANG

    2013-01-01

    Through a questionnaire survey, the working status, payment and ideological conditions of 166 grassroots agro-technicians were studied and analyzed. As is indicated by the results, the technicians are generally paid with low wages, and lack enthusiasm and initiative in jobs, and most of them take a second job. After an exposure of the existing problems in the grassroots agricultural extension system in Yichang, some suggestions were proposed for improving the agricultural extension system in the new era.

  17. Effect of titanium and stainless steel posts in detection of vertical root fractures using NEWTOM VG cone beam computed tomography system

    Energy Technology Data Exchange (ETDEWEB)

    Mohammadpour, Mahdis [Dept. of Oral and Maxillofacial Radiology, School of Dentistry, Qazvin University of Medical Sciences, Qazvin (Iran, Islamic Republic of); Bakhshalian, Neema [Dept. of Advanced Periodontology, Ostrow School of Dentistry, University of Southern California, Los Angeles (United States); Shahab, Shahriar [Dept. of Oral and Maxillofacial Radiology, School of Dentistry, Shahed University, Tehran (Iran, Islamic Republic of); Sadeghi, Shaya; Ataee, Mona [Radmehr Oral and Maxillofacial Radiology Clinic, Ghazvin (Iran, Islamic Republic of); Sarikhani, Soodeh [Dept. of Oral and Maxillofacial Radiology, School of Dentistry, University of Golestan, Gorgan (Iran, Islamic Republic of)

    2014-06-15

    Vertical root fracture (VRF) is a common complication in endodontically treated teeth. Considering the poor prognosis of VRF, a reliable and valid detection method is necessary. Cone beam computed tomography (CBCT) has been reported to be a reliable tool for the detection of VRF; however, the presence of metallic intracanal posts can decrease the diagnostic values of CBCT systems. This study evaluated and compared the effects of intracanal stainless steel or titanium posts on the sensitivity, specificity, and accuracy of VRF detection using a NewTom VG CBCT system. Eighty extracted single-rooted teeth were selected and sectioned at the cemento-enamel junction. The roots were divided into two groups of 40. Root fracture was induced in the test group by using an Instron machine, while the control group was kept intact. Roots were randomly embedded in acrylic blocks and radiographed with the NewTom VG, both with titanium and stainless steel posts and also without posts. Sensitivity, specificity, and accuracy values were calculated as compared to the gold standard. The sensitivity, specificity, and accuracy of VRF diagnosis were significantly lower in teeth with stainless steel and titanium posts than in those without posts. Interobserver agreement was the highest in teeth without posts, followed by stainless steel posts, and then titanium posts. Intracanal posts significantly decreased the VRF diagnostic values of CBCT. The stainless steel posts decreased the diagnostic values more than the titanium posts.

  18. Strontium and oxygen isotopic profiles through 3 km of hydrothermally altered oceanic crust in the Reykjanes Geothermal System, Iceland

    Science.gov (United States)

    Marks, N. E.; Zierenberg, R. A.; Schiffman, P.

    2010-12-01

    The Iceland Deep Drilling Program well of opportunity RN-17 was drilled 3 km into a section of hydrothermally altered basaltic crust in the Reykjanes geothermal system in Iceland. The system is located on the landward extension of the Mid-Atlantic Ridge, and the circulating hydrothermal fluid is modified seawater, making Reykjanes a useful analogue for mid-oceanic ridge hydrothermal systems. Whole rock oxygen isotope ratios range from -0.13 to 3.61‰, which are significantly depleted relative to fresh MORB (5.8±0.2‰). If oxygen isotope exchange between fluid and rock proceeded under equilibrium in a closed system, the bulk of the exchange must have occurred in the presence of a meteoric- as opposed to seawater-derived fluid. The concentrations of Sr in the altered basalt range from well below to well above concentrations in fresh rock, and appear to be strongly correlated with the dominant alteration mineralogy, although there is no correlation with 87Sr/86Sr isotopic ratios. Whole rock Sr isotopic ratios ranged from 0.70329 in the least altered crystalline basalt, to 0.70609 in the most altered hyaloclastite samples; there is no correlation with depth. Sr isotopic variation in epidote grains measured by laser ablation MC-ICP-MS ranged from 0.70353 to 0.70731. Three depth intervals have distinctive isotopic signatures, at 1000 m, 1350 m, and 2000 m depth, where 87Sr/86Sr ratios are elevated (mean value >0.7050) relative to background levels (mean altered basalt value ~0.7042). These areas are proximal to feed zones, and the 1350 m interval directly overlies the transition from dominantly extrusive to intrusive lithologies. Strontium and oxygen isotope data indicate that the greenschist-altered basalts were in equilibrium with modified hydrothermal fluids at a relatively high mean water/rock mass ratios (generally in the range 1-3), and require the presence of both meteoric- and seawater-derived recharge fluids at various stages in the hydrothermal history.

  19. An evidence-based toolkit for the development of effective and sustainable root cause analysis system safety solutions.

    Science.gov (United States)

    Hettinger, A Zachary; Fairbanks, Rollin J; Hegde, Sudeep; Rackoff, Alexandra S; Wreathall, John; Lewis, Vicki L; Bisantz, Ann M; Wears, Robert L

    2013-01-01

    Root cause analysis (RCA) after adverse events in healthcare is a standard practice at many institutions. However, healthcare has failed to see a dramatic improvement in patient safety over the last decade. In order to improve the RCA process, this study used systems safety science, which is based partly on human factors engineering principles and has been applied with success in other high-risk industries like aviation. A multi-institutional dataset of 334 RCA cases and 782 solutions was analyzed using qualitative methods. A team of safety science experts developed a model of 13 RCA solutions categories through an iterative process, using semi-structured interview data from 44 frontline staff members from 7 different hospital-based unit types. These categories were placed in a model and toolkit to help guide RCA teams in developing sustainable and effective solutions to prevent future adverse events. This study was limited by its retrospective review of cases and use of interviews rather than clinical observations. In conclusion, systems safety principles were used to develop guidelines for RCA teams to promote systems-level sustainable and effective solutions for adverse events.

  20. Physarum Polycephalum Syllogistic L-Systems and Judaic Roots of Unconventional Computing

    Directory of Open Access Journals (Sweden)

    Schumann Andrew

    2016-03-01

    Full Text Available We show that in Kabbalah, the esoteric teaching of Judaism, there were developed ideas of unconventional automata in which operations over characters of the Hebrew alphabet can simulate all real processes producing appropriate strings in accordance with some algorithms. These ideas may be used now in a syllogistic extension of Lindenmayer systems (L-systems, where we deal also with strings in the Kabbalistic-Leibnizean meaning. This extension is illustrated by the behavior of Physarum polycephalum plasmodia which can implement, first, the Aristotelian syllogistic and, second, a Talmudic syllogistic by qal wa-homer.

  1. Voting in the European Union: The square root system of Penrose and a critical point

    OpenAIRE

    Zyczkowski, Karol; Slomczynski, Wojciech

    2004-01-01

    The notion of the voting power is illustrated by examples of the systems of voting in the European Council according to the Treaty of Nice and the more recent proposition of the European Convent. We show that both systems are not representative, in a sense that citizens of different countries have not the same influence for the decision taken by the Council. We present a compromise solution based on the law of Penrose, which states that the weights for each country should be proportional to t...

  2. Transgender women and the sex work industry: roots in systemic, institutional, and interpersonal discrimination.

    Science.gov (United States)

    Nadal, Kevin L; Davidoff, Kristin C; Fujii-Doe, Whitney

    2014-01-01

    Because transgender people face discrimination on systemic, institutional, and interpersonal levels, the previous literature has supported that many transgender women view the sex work industry as their only viable career option. The current article reviews the literature on discrimination against transgender people, explores how discrimination influences their participation in sex work, and discusses how institutional discrimination against transgender women manifests within the criminal justice system. Furthermore, recommendations are provided for advocating for the rights of transgender people while promoting healthy behaviors and higher quality of life. Throughout the article, quotes from previous qualitative research are used to illustrate the experiences of transgender women through their own voices and perspectives.

  3. Fate of polycyclic aromatic hydrocarbons in plant-soil systems: Plant responses to a chemical stress in the root zone

    Energy Technology Data Exchange (ETDEWEB)

    Hoylman, Anne M. [Univ. of Tennessee, Knoxville, TN (United States)

    1994-01-01

    Under laboratory conditions selected to maximize root uptake, plant tissue distribution of PAH-derived 14C was largely limited to root tissue of Malilotus alba. These results suggest that plant uptake of PAHs from contaminated soil via roots, and translocation to aboveground plant tissues (stems and leaves), is a limited mechanism for transport into terrestrial food chains. However, these data also indicate that root surface sorption of PAHs may be important for plants grown in soils containing elevated concentration PAHs. Root surface sorption of PAHs may be an important route of exposure for plants in soils containing elevated concentrations of PAHS. Consequently, the root-soil interface may be the site of plant-microbial interactions in response to a chemical stress. In this study, evidence of a shift in carbon allocation to the root zone of plants exposed to phenanthrene and corresponding increases in soil respiration and heterotrophic plate counts provide evidence of a plant-microbial response to a chemical stress. The results of this study establish the importance of the root-soil interface for plants growing in PAH contaminated soil and indicate the existence of plant-microbial interactions in response to a chemical stress. These results may provide new avenues of inquiry for studies of plant toxicology, plant-microbial interactions in the rhizosphere, and environmental fates of soil contaminants. In addition, the utilization of plants to enhance the biodegradation of soil contaminants may require evaluation of plant physiological changes and plant shifts in resource allocation.

  4. Fate of polycyclic aromatic hydrocarbons in plant-soil systems: Plant responses to a chemical stress in the root zone

    Energy Technology Data Exchange (ETDEWEB)

    Hoylman, A.M. [Tennessee Univ., Knoxville, TN (United States). Dept. of Ecology; Walton, B.T. [Oak Ridge National Lab., TN (United States)

    1994-01-01

    Under laboratory conditions selected to maximize root uptake, plant tissue distribution of PAH-derived {sup 14}C was largely limited to root tissue of Malilotus alba. These results suggest that plant uptake of PAHs from contaminated soil via roots, and translocation to aboveground plant tissues (stems and leaves), is a limited mechanism for transport into terrestrial food chains. However, these data also indicate that root surface sorption of PAHs may be important for plants grown in soils containing elevated concentration PAHs. Root surface sorption of PAHs may be an important route of exposure for plants in soils containing elevated concentrations of PAHS. Consequently, the root-soil interface may be the site of plant-microbial interactions in response to a chemical stress. In this study, evidence of a shift in carbon allocation to the root zone of plants exposed to phenanthrene and corresponding increases in soil respiration and heterotrophic plate counts provide evidence of a plant-microbial response to a chemical stress. The results of this study establish the importance of the root-soil interface for plants growing in PAH contaminated soil and indicate the existence of plant-microbial interactions in response to a chemical stress. These results may provide new avenues of inquiry for studies of plant toxicology, plant-microbial interactions in the rhizosphere, and environmental fates of soil contaminants. In addition, the utilization of plants to enhance the biodegradation of soil contaminants may require evaluation of plant physiological changes and plant shifts in resource allocation.

  5. Contribution of the root system of vetiver grass towards slope stabilization of the São Francisco River

    Directory of Open Access Journals (Sweden)

    Lorena Machado

    2015-08-01

    Full Text Available The control of soil erosion along the banks of the São Francisco River requires the use of efficient and economically viable strategies. Soil bioengineering techniques may be an alternative to the conventional methods as they provide good soil stabilization by mechanical reinforcement promoted by the roots. The objective of this study was to evaluate the contribution of the root cohesion of vetiver grass (Chrysopogon zizanioides (L. Roberty on slope stabilization in erosion control along the right margin of the São Francisco river. Seedlings of vetiver grass were planted in the riverbank of the Lower São Francisco located in Sergipe State, northeast Brazil, and plants were sampled after two years of growth to evaluate the effect of grass on the shear strength of the soil. The monolith and cylinder method was used to collect roots for the evaluation of Root Density (RL, Root Length Density (RLD, Root Area Ratio (RAR, Root Tensile Strength (TR, and Root Cohesion (CR. Data were submitted to analysis of variance (p < 0.05, with polynomial regression analysis. The results show that for RL, RLD, and RAR, the layers of soil at depths of 0-0.10 m had the highest values of 4.84 kg m-3, 12.45 km m-3, 1.66%, respectively. The mean TR was 83 MPa and CR was 528 kPa. Vetiver increases shear strength of the soil and slope stabilization.

  6. Altered systemic bioavailability and organ distribution of azathioprine in methotrexate-induced intestinal mucositis in rats

    Directory of Open Access Journals (Sweden)

    Sadaf A Karbelkar

    2016-01-01

    Conclusion: Study outcome has thrown light on altered fate of AZA when administered to individuals with mucositis which suggests modified drug therapy. These findings can further be investigated in different drug classes which might be administered concomitantly in mucositis and study outcome can be further confirmed in mucositis patients in clinical practice also.

  7. Response of the photosynthetic system to altered protein composition and changes in environmental conditions

    NARCIS (Netherlands)

    Tóth, T.

    2014-01-01

    The photosynthetic thylakoid membrane has a hierarchically ordered structure containing pigment-protein complexes that capture solar radiation and convert it into chemical energy. Its highly dynamic structure is capable to continuously respond to the altered environmental conditions, e.g., light qua

  8. 76 FR 47190 - Privacy Act of 1974; Report of Modified or Altered System

    Science.gov (United States)

    2011-08-04

    ... Medicare Advantage (MA) and Medicare Advantage Prescription Drug (MA- PD) plan members for accounting and... Medicare Advantage Prescription Drug (MA- PD) plan members for accounting and payment control; expedite the... requirements of the Privacy Act of 1974, we are proposing to modify or alter a SOR titled, ``Medicare...

  9. 75 FR 5606 - Privacy Act of 1974; Report of an Altered System of Records

    Science.gov (United States)

    2010-02-03

    ... HUMAN SERVICES Health Resources and Services Administration Privacy Act of 1974; Report of an Altered... requirements of the Privacy Act of 1974, the Health Resources and Services Administration (HRSA) is proposing... Identifiable Information, released on May 22, 2007 by OMB; change the location of records; update...

  10. Diverse evolutionary roots and mechanistic variations of the CRISPR-Cas systems

    NARCIS (Netherlands)

    Mohanraju, Prarthana; Makarova, Kira S.; Zetsche, Bernd; Zhang, Feng; Koonin, Eugene V.; Oost, van der John

    2016-01-01

    Adaptive immunity had been long thought of as an exclusive feature of animals. However, the discovery of the CRISPR-Cas defense system, present in almost half of prokaryotic genomes, proves otherwise. Because of the everlasting parasite-host arms race, CRISPR-Cas has rapidly evolved through horiz

  11. Retaining rooted operations capabilities in footloose supply networks – the system cluster configuration

    DEFF Research Database (Denmark)

    Søberg, Peder Veng; Wæhrens, Brian Vejrum

    2014-01-01

    Original Equipment Manufacturer (OEM) customers feel a need to realize the benefits of outsourcing, while maintaining the development force, which can easily be lost, if too much is outsourced. The paper illustrates the innovative value chain configuration “system cluster”, in which suppliers...

  12. Finitely Smooth Local Equivalence of Autonomous Systems with One Zero Root

    NARCIS (Netherlands)

    Samovol, V. S.

    2010-01-01

    In this paper, in a neighborhood of a singular point, we consider autonomous systems of ordinary differential equations such that the matrix of their linear part has one zero eigenvalue, while the other eigenvalues lie outside the imaginary axis. We prove that the problem of finitely smooth equivale

  13. Is Participation Rooted in Colonialism? Agricultural Innovation Systems and Participation in the Netherlands Indies

    NARCIS (Netherlands)

    Maat, H.

    2007-01-01

    Participation is connected to technology through the notion of innovation systems. To make the connection work, it is argued, the focus has to shift from a framing of participation in terms of democratic entitlement to a framing in terms of the settlement of issues (i.e. politics from below), The in

  14. The Roots of North America's First Comprehensive Public Health Insurance System

    Directory of Open Access Journals (Sweden)

    Ostry, Aleck

    2001-06-01

    Full Text Available The Canadian province of Saskatchewan in 1944 it inherited a long tradition of "socialized" medicine in many rural regions. However, urban medicine was based on fee-for-service payment of physicians and no private health insurance. In crafting North America's first public health insurance system, the government built on the rural medical infrastructure already in place by expanding a rural salaried system of physician payment and successfully promoted a regional comprehensive insurance system piloted in a southern region of the province. However, major demographic shifts from countryside to city during the 1950s, burgeoning physician supply, increased immigration of physicians into the provinces' cities, and aggressive expansion of urban-based private insurance for physician services into rural regions, shifted the balance of medical power away from rural towards urban centers in the province. The increasing resistance, by the medical profession, to health-care reform in Saskatchewan in the 1950s must be considered within a geographic framework as rural regions of the province became the major battleground between government and insurance third party payers. While historical comparisons should not be overstated, re-visiting this struggle may be useful in the current era in which the pressure for privatization of the medical system in Canada appear to be growing.

  15. Water uptake patterns and root system architecture of Zea mays in a natural soil under influence of drought stress monitored by MRI

    Science.gov (United States)

    Merz, Steffen; Pohlmeier, Andreas; Seidler, Christina; van Dusschoten, Dagmar; Vereecken, Harry

    2012-04-01

    The interface between roots and soil plays a key role in water transport in the Soil-Plant-Atmosphere-Continuum (SPAC). The transport which changes with the degree of dehydration is influenced by both the hydraulic conductivity of roots and the soil. One important factor in plant growth is the amount of available water in the soil, which correlates directly with soil texture. Water uptake of plant roots and water uptake patterns in soil can be monitored using non-invasive 1H Nuclear Magnetic Resonance Imaging (MRI). In a preceding study the effect of root water uptake and uniform desiccation patterns under drought conditions were observed for Ricinus communis grown in a model medium (Pohlmeier et al. 2008). Continuing these studies, the new aspect is the determination of water uptake patterns and root system architecture in a natural soil. The general challenge of MRI in soils are the inherent fast relaxation times T2* and T2 of the soil matrix. With the use of conventional sequences only water in macropores can be determined. The loss of sensitivity can be overcome by MRI sequences with sufficiently short detection times. In this work we employed and assessed two methods: SPI (Single Point Imaging) detects the T2* relaxation with a dead time of architecture. This study shows that SPI3D and SE3D are feasible for the determination of water content in a natural soil up to a certain detection limit. We observed quite uniform water uptake patterns during drying of the soil until water content was less than 0.15 cm^3/cm^3, which is the detection limit of both sequences for the used soil material. Accordingly, this indicates an always sufficiently high hydraulic conductivity of the soil to sustain water supply for the plant. The growth of the root system architecture could reliably been visualized with SEMS sequence where the best differentiation between soil and roots is obtained by the choice of long echo time and small voxel size. During the whole drought period we

  16. Space Shuttle Operations and Infrastructure: A Systems Analysis of Design Root Causes and Effects

    Science.gov (United States)

    McCleskey, Carey M.

    2005-01-01

    This NASA Technical Publication explores and documents the nature of Space Shuttle operations and its supporting infrastructure and addresses fundamental questions often asked of the Space Shuttle program why does it take so long to turnaround the Space Shuttle for flight and why does it cost so much? Further, the report provides an overview of the cause-and effect relationships between generic flight and ground system design characteristics and resulting operations by using actual cumulative maintenance task times as a relative measure of direct work content. In addition, this NASA TP provides an overview of how the Space Shuttle program's operational infrastructure extends and accumulates from these design characteristics. Finally, and most important, the report derives a set of generic needs from which designers can revolutionize space travel from the inside out by developing and maturing more operable and supportable systems.

  17. A digital photography and analysis system for estimation of root and shoot development in rice weed suppression studies in the field

    Science.gov (United States)

    Rice germplasm with an inherent ability to suppress weeds can potentially improve the economics and sustainability of weed control in rice. We devised a simple, rapid, and inexpensive digital imaging system to quantify several shoot and root growth characteristics in field-grown rice plants that ha...

  18. β-Glucosidase BGLU42 is a MYB72-dependent key regulator of rhizobacteria-induced systemic resistance and modulates iron deficiency responses in Arabidopsis roots

    NARCIS (Netherlands)

    Zamioudis, Christos; Hanson, Johannes; Pieterse, Corné M J

    2014-01-01

    Selected soil-borne rhizobacteria can trigger an induced systemic resistance (ISR) that is effective against a broad spectrum of pathogens. In Arabidopsis thaliana, the root-specific transcription factor MYB72 is required for the onset of ISR, but is also associated with plant survival under conditi

  19. Rhizobacterial volatiles and photosynthesis-related signals coordinate MYB72 in Arabidopsis roots during onset of induced systemic resistance and iron deficiency responses

    NARCIS (Netherlands)

    Zamioudis, C.; Korteland, J.; Van Pelt, J.A.; Van Hamersveld, M.; Dombrowski, N.; Bai, Y.; Hanson, J.; Van Verk, M.C.; Ling, H.-Q.; Schulze-Lefert, P.; Pieterse, C.M.J.

    2015-01-01

    In Arabidopsis roots, the transcription factor MYB72 plays a dual role in the onset of rhizobacteria-induced systemic resistance (ISR) and plant survival under conditions of limited iron availability. Previously, it was shown that MYB72 coordinates the expression of a gene module that promotes synth

  20. Comparative micro-computed tomography evaluation of apical root canal transportation with the use of ProTaper, RaCe and Safesider systems in human teeth.

    Science.gov (United States)

    Ceyhanli, Kadir T; Erdilek, Necdet; Tatar, Ilkan; Cetintav, Bekir

    2014-04-01

    The aim of this study was to compare apical centring ability of nickel titanium (NiTi) ProTaper, RaCe and mainly stainless steel Safesider systems using micro-computed tomography. Thirty freshly extracted mandibular molars with two separate mesial canals and separate foramina were used for the study. Mesial roots were embedded in acrylic resin and instrumented with the ProTaper, RaCe or Safesider systems. Root canal transportation and centring ability of the instruments were evaluated using superimposed micro-computed tomography images of the apical 4 mm of the roots taken at 1 mm intervals. One-way analysis of variance and post hoc Tukey's tests were performed to compare apical transportations. Significant differences were observed between groups at the apical 1, 2 and 3 mm levels (P ProTaper instruments caused more apical root canal transportation than did RaCe instruments at apical 3 mm (P = 0.045). NiTi instrumentation systems showed better centring ability than the mainly stainless steel Safesider system because of the flexible structure of the NiTi alloy.

  1. Systemic responses in a tolerant olive (Olea europaea L. cultivar upon root colonization by the vascular pathogen Verticillium dahliae

    Directory of Open Access Journals (Sweden)

    Carmen Gómez-Lama Cabanás

    2015-09-01

    Full Text Available Verticillium wilt of olive (VWO is caused by the vascular pathogen Verticillium dahliae. One of the best VWO management measures is the use of tolerant cultivars; however, our knowledge on VWO tolerance/resistance genetics is very limited. A transcriptomic analysis was conducted to (i identify systemic defence responses induced/repressed in aerial tissues of the tolerant cultivar Frantoio upon root colonization by V. dahliae, and (ii determine the expression pattern of selected defence genes in olive cultivars showing differential susceptibility to VWO. Two suppression subtractive hybridization cDNA libraries, enriched in up-regulated (FU and down-regulated (FD genes respectively, were generated from ‘Frantoio’ aerial tissues. Results showed that broad systemic transcriptomic changes are taking place during V. dahliae-‘Frantoio’ interaction. A total of 585 FU and 381 FD unigenes were identified, many of them involved in defence response to (abiotic stresses. Selected genes were then used to validate libraries and evaluate their temporal expression pattern in ‘Frantoio’. Four defence genes were analyzed in cultivars Changlot Real (tolerant and Picual (susceptible. An association between GRAS1 and DRR2 gene expression patterns and susceptibility to VWO was observed, suggesting that these transcripts could be further evaluated as markers of the tolerance level of olive cultivars to V. dahliae.

  2. Evaluation of Biomass Yield and Water Treatment in Two Aquaponic Systems Using the Dynamic Root Floating Technique (DRF

    Directory of Open Access Journals (Sweden)

    Laura Silva

    2015-11-01

    Full Text Available The experiment evaluates the food production and water treatment of TAN, NO2−–N, NO3−–N, and PO43− in two aquaponics systems using the dynamic root floating technique (DRF. A separate recirculation aquaculture system (RAS was used as a control. The fish cultured was Nile tilapia (Oreochromis niloticus. The hydroponic culture in one treatment (PAK was pak choy (Brassica chinensis, and in the other (COR coriander (Coriandrum sativum. Initial and final weights were determined for the fish culture. Final edible fresh weight was determined for the hydroponic plant culture. TAN, NO2−–N, NO3−–N, and PO43− were measured in fish culture and hydroponic culture once a week at two times, morning (9:00 a.m. and afternoon (3:00 p.m.. The fish biomass production was not different in any treatment (p > 0.05 and the total plant yield was greater (p < 0.05 in PAK than in COR. For the hydroponic culture in the a.m., the PO43− was lower (p < 0.05 in the PAK treatment than in COR, and in the p.m. NO3−–N and PO43− were lower (p < 0.05 in PAK than in COR. The PAK treatment demonstrated higher food production and water treatment efficiency than the other two treatments.

  3. Iron Deficiency-induced Increase of Root Branching Contributes to the Enhanced Root Ferric Chelate Reductase Activity

    Institute of Scientific and Technical Information of China (English)

    Chong-Wei Jin; Wei-Wei Chen; Zhi-Bin Meng; Shao-Jian Zheng

    2008-01-01

    In various plant species, Fe deficiency increases lateral root branching. However, whether this morphological alteration contributes to the Fe deficiency-induced physiological responses still remains to be demonstrated. In the present research, we demonstrated that the lateral root development of red clover (Trifolium pretense L.) was significantly enhanced by Fe deficient treatment, and the total lateral root number correlated well with the Fe deficiency-induced ferric chelate reductase (FCR) activity. By analyzing the results from Dasgan et al. (2002), we also found that although the two tomato genotypes line227/1 (P1) and Roza (P2) and their reciprocal F1 hybrid lines ("P1 × P2" and "P2 × P1 ") were cultured under two different lower Fe conditions (10-6 and 10-7 M FeEDDHA), their FCR activities are significantly correlated with the lateral root number. More interestingly, the -Fe chlorosis tolerant ability of these four tomato lines displays similar trends with the lateral root density. Taking these results together, it was proposed that the Fe deficiency-induced increases of the lateral root should play an important role in resistance to Fe deficiency, which may act as harnesses of a useful trait for the selection and breeding of more Fe-efficiant crops among the genotypes that have evolved a Fe deficiency-induced Fe uptake system.

  4. The Root Hair Specific SYP123 Regulates the Localization of Cell Wall Components and Contributes to Rizhobacterial Priming of Induced Systemic Resistance

    Directory of Open Access Journals (Sweden)

    Cecilia Rodriguez-Furlán

    2016-07-01

    Full Text Available Root hairs are important for nutrient and water uptake and are also critically involved the interaction with soil inhabiting microbiota. Root hairs are tubular-shaped outgrowths that emerge from trichoblasts. This polarized elongation is maintained and regulated by a robust mechanism involving the endomembrane secretory and endocytic system. Members of the syntaxin family of SNAREs (soluble N-ethylmaleimide-sensitive factor attachment protein receptor in plants (SYP, have been implicated in regulation of the fusion of vesicles with the target membranes in both exocytic and endocytic pathways. One member of this family, SYP123, is expressed specifically in the root hairs and accumulated in the growing tip region. This study shows evidence of the SYP123 role in polarized trafficking using knockout insertional mutant plants. We were able to observe defects in the deposition of cell wall proline rich protein PRP3 and cell wall polysaccharides. In a complementary strategy, similar results were obtained using a plant expressing a dominant negative soluble version of SYP123 (SP2 fragment lacking the transmembrane domain. The evidence presented indicates that SYP123 is also regulating PRP3 protein distribution by recycling by endocytosis. We also present evidence that indicates that SYP123 is necessary for the response of roots to plant growth promoting rhizobacterium (PGPR in order to trigger trigger induced systemic response (ISR. Plants with a defective SYP123 function were unable to mount a systemic acquired resistance (SAR in response to bacterial pathogen infection and induced systemic resistance (ISR upon interaction with rhizobacteria. These results indicated that SYP123 was involved in the polarized localization of protein and polysaccharides in growing root hairs and that this activity also contributed to the establishment of effective plant defense responses. Root hairs represent very plastic structures were many biotic and abiotic factors

  5. Genetic dissection of maize seedling root system architecture traits using an ultra-high density bin-map and a recombinant inbred line population

    Institute of Scientific and Technical Information of China (English)

    Weibin Song; Baobao Wang; Andrew L Hauck; Xiaomei Dong; Jieping Li; Jinsheng Lai

    2016-01-01

    Maize (Zea mays) root system architecture (RSA) mediates the key functions of plant anchorage and acquisition of nutrients and water. In this study, a set of 204 recombinant inbred lines (RILs) was derived from the widely adapted Chinese hybrid ZD958(Zheng58 ? Chang7-2), genotyped by sequencing (GBS) and evaluated as seedlings for 24 RSA related traits divided into primary, seminal and total root classes. Significant differences between the means of the parental phenotypes were detected for 18 traits, and extensive transgressive segregation in the RIL population was observed for all traits. Moderate to strong relationships among the traits were discovered. A total of 62 quantitative trait loci (QTL) were identified that individually explained from 1.6% to 11.6% (total root dry weight/total seedling shoot dry weight) of the phenotypic variation. Eighteen, 24 and 20 QTL were identified for primary, seminal and total root classes of traits, respectively. We found hotspots of 5, 3, 4 and 12 QTL in maize chromosome bins 2.06, 3.02-03, 9.02-04, and 9.05-06, respectively, implicating the presence of root gene clusters or pleiotropic effects. These results characterized the phenotypic variation and genetic architecture of seedling RSA in a population derived from a successful maize hybrid.

  6. Mapping tree root system in dikes using induced polarization: Focus on the influence of soil water content

    Science.gov (United States)

    Mary, Benjamin; Saracco, Ginette; Peyras, Laurent; Vennetier, Michel; Mériaux, Patrice; Camerlynck, Christian

    2016-12-01

    In this study, we assessed induced polarization as potential non-destructive method for root detection in dike embankments. We used both laboratory and field experiment to describe the electrical signal with a focus on soil water content. Our objective was to determine in which hydric state of the soil, and related electrical properties, roots could be accurately discriminated. We hypothesized that preferential water zone absorption near the roots could, in some conditions, contribute to locate them. During the laboratory experiments, we compared the response of containers filled with the same homogeneous silty clay bare material, and without (A) or with freshly cut root (B) at different levels of soil water content. Resistivity and phase variations with soil water content indicated that it was preferable to work in dry conditions since the contrast was higher. Interactions and overlapping between polarization effects of both root and soil made it difficult to interpret first chargeability maps. This led us to study temporal-spatial variations by considering the dynamics of water absorption during a field experiment. High resolution time lapses images showed a correlation between root location and complex resistivity anomalies. Although these first results have to be confirmed by further measurements, induced polarization seems to add useful information to interpret anomalies produced by woody roots.

  7. 红砂根系构型对干旱的生态适应%Ecological Adaptation of Reaumuria Soongorica Root System Architecture to Arid Environment

    Institute of Scientific and Technical Information of China (English)

    单立山; 李毅; 董秋莲; 耿东梅

    2012-01-01

    对西北干旱、半干旱区不同生境条件下红砂(Reaumuriasoongorica)根系构型参数进行了分析,以探讨红砂根系构型对干旱的生态适应性。结果表明:①不同生境条件下红砂根系的拓扑指数均较小,根系分支模式接近叉状分支模式,但在干旱的河西走廊风沙区和戈壁区红砂根系拓扑指数均逐渐增加,表明干旱有使红砂根系分支向鱼尾分支模式发展。②干旱的河西走廊风沙区和戈壁区红砂根系分形维数均较小,分别为1.1778、1.1169,分形特征不是很明显;而半干旱的黄土丘陵沟壑区分形维数较大,根系具有很好的分形特征。③干旱的河西走廊红砂根系总分支率均比半干旱的黄土丘陵沟壑区要小,表明在半干旱的黄土丘陵沟壑区红砂根系分支能力相对较强,随着干旱的增加其分支能力有所减弱。④不同生境条件下红砂根系的连接长度都较大,但不同生境却表现出明显差异,其中干旱风沙区根系平均连接长度最长。红砂为适应干旱的环境通过减少根系次级分支和根系的重叠、增加根系连接长度,使其根系的分支模式向鱼尾分支模式发展以降低根系内部对营养物质的竞争,提高根系对营养物质的吸收效率,保证植物有效的营养空间,从而在资源贫瘠的环境中吸收足够的水分和营养来保证其正常生理需求。%The architecture parameters of Reaumuria soongorica root system at different habitats in Gansu Province, China were analyzed to examine its ecological adaptability to arid environment. Results show that: (1) Topological indices of R. soongorica root system are small at all the habitats, and root branching pattern tends to be dichotomous. The topological indices of R. soongorica root system gradually increase in the Minqin windblown sand region and the Zhangye gobi region in Hexi Corridor, which indicates that drought makes

  8. Influence of NiTi alloy on the root canal shaping capabilities of the ProTaper Universal and ProTaper Gold rotary instrument systems

    Directory of Open Access Journals (Sweden)

    Jussaro Alves DUQUE

    Full Text Available Abstract Objective This study aimed to evaluate the influence of the NiTi wire in Conventional NiTi (ProTaper Universal PTU and Controlled Memory NiTi (ProTaper Gold PTG instrument systems on the quality of root canal preparation. Material and Methods Twelve mandibular molars with separate mesial canals were scanned using a high-definition microcomputed tomography system. The PTU and PTG instruments were used to shape twelve mesial canals each. The canals were scanned after preparation with F2 and F3 instruments of the PTU and PTG systems. The analyzed parameters included the remaining dentin thickness at the apical and cervical levels, root canal volume and untouched canal walls. Data was analyzed for statistical significance by the Friedman and Dunn’s tests. For the comparison of data between groups, the Mann-Whitney test was used. Results In the pre-operative analysis, there were no statistically significant differences between the groups in terms of the area and volume of root canals (P>.05. There was also no statistically significant difference between the systems with respect to root canal volume after use of the F2 and F3 instruments. There was no statistical difference in the dentin thickness at the first apical level between, before and after instrumentation for both systems. At the 3 cervical levels, the PTG maintained centralization of the preparation on the transition between the F2 and F3 instruments, which did not occur with the PTU. Conclusion The Conventional NiTi (PTU and Controlled Memory NiTi (PTG instruments displayed comparable capabilities for shaping the straight mesial root canals of mandibular molars, although the PTG was better than the PTU at maintaining the centralization of the shape in the cervical portion.

  9. Influence of NiTi alloy on the root canal shaping capabilities of the ProTaper Universal and ProTaper Gold rotary instrument systems

    Science.gov (United States)

    DUQUE, Jussaro Alves; VIVAN, Rodrigo Ricci; CAVENAGO, Bruno Cavalini; AMOROSO-SILVA, Pablo Andrés; BERNARDES, Ricardo Affonso; de VASCONCELOS, Bruno Carvalho; DUARTE, Marco Antonio Hungaro

    2017-01-01

    Abstract Objective This study aimed to evaluate the influence of the NiTi wire in Conventional NiTi (ProTaper Universal PTU) and Controlled Memory NiTi (ProTaper Gold PTG) instrument systems on the quality of root canal preparation. Material and Methods Twelve mandibular molars with separate mesial canals were scanned using a high-definition microcomputed tomography system. The PTU and PTG instruments were used to shape twelve mesial canals each. The canals were scanned after preparation with F2 and F3 instruments of the PTU and PTG systems. The analyzed parameters included the remaining dentin thickness at the apical and cervical levels, root canal volume and untouched canal walls. Data was analyzed for statistical significance by the Friedman and Dunn’s tests. For the comparison of data between groups, the Mann-Whitney test was used. Results In the pre-operative analysis, there were no statistically significant differences between the groups in terms of the area and volume of root canals (P>.05). There was also no statistically significant difference between the systems with respect to root canal volume after use of the F2 and F3 instruments. There was no statistical difference in the dentin thickness at the first apical level between, before and after instrumentation for both systems. At the 3 cervical levels, the PTG maintained centralization of the preparation on the transition between the F2 and F3 instruments, which did not occur with the PTU. Conclusion The Conventional NiTi (PTU) and Controlled Memory NiTi (PTG) instruments displayed comparable capabilities for shaping the straight mesial root canals of mandibular molars, although the PTG was better than the PTU at maintaining the centralization of the shape in the cervical portion. PMID:28198973

  10. The Root Hair Specific SYP123 Regulates the Localization of Cell Wall Components and Contributes to Rizhobacterial Priming of Induced Systemic Resistance

    Science.gov (United States)

    Rodriguez-Furlán, Cecilia; Salinas-Grenet, Hernán; Sandoval, Omar; Recabarren, Camilo; Arraño-Salinas, Paulina; Soto-Alvear, Sylvana; Orellana, Ariel; Blanco-Herrera, Francisca

    2016-01-01

    Root hairs are important for nutrient and water uptake and are also critically involved the interaction with soil inhabiting microbiota. Root hairs are tubular-shaped outgrowths that emerge from trichoblasts. This polarized elongation is maintained and regulated by a robust mechanism involving the endomembrane secretory and endocytic system. Members of the syntaxin family of SNAREs (soluble N-ethylmaleimide-sensitive factor attachment protein receptor) in plants (SYP), have been implicated in regulation of the fusion of vesicles with the target membranes in both exocytic and endocytic pathways. One member of this family, SYP123, is expressed specifically in the root hairs and accumulated in the growing tip region. This study shows evidence of the SYP123 role in polarized trafficking using knockout insertional mutant plants. We were able to observe defects in the deposition of cell wall proline rich protein PRP3 and cell wall polysaccharides. In a complementary strategy, similar results were obtained using a plant expressing a dominant negative soluble version of SYP123 (SP2 fragment) lacking the transmembrane domain. The evidence presented indicates that SYP123 is also regulating PRP3 protein distribution by recycling by endocytosis. We also present evidence that indicates that SYP123 is necessary for the response of roots to plant growth promoting rhizobacterium (PGPR) in order to trigger trigger induced systemic response (ISR). Plants with a defective SYP123 function were unable to mount a systemic acquired resistance in response to bacterial pathogen infection and ISR upon interaction with rhizobacteria. These results indicated that SYP123 was involved in the polarized localization of protein and polysaccharides in growing root hairs and that this activity also contributed to the establishment of effective plant defense responses. Root hairs represent very plastic structures were many biotic and abiotic factors can affect the number, anatomy and physiology of

  11. The Root Hair Specific SYP123 Regulates the Localization of Cell Wall Components and Contributes to Rizhobacterial Priming of Induced Systemic Resistance.

    Science.gov (United States)

    Rodriguez-Furlán, Cecilia; Salinas-Grenet, Hernán; Sandoval, Omar; Recabarren, Camilo; Arraño-Salinas, Paulina; Soto-Alvear, Sylvana; Orellana, Ariel; Blanco-Herrera, Francisca

    2016-01-01

    Root hairs are important for nutrient and water uptake and are also critically involved the interaction with soil inhabiting microbiota. Root hairs are tubular-shaped outgrowths that emerge from trichoblasts. This polarized elongation is maintained and regulated by a robust mechanism involving the endomembrane secretory and endocytic system. Members of the syntaxin family of SNAREs (soluble N-ethylmaleimide-sensitive factor attachment protein receptor) in plants (SYP), have been implicated in regulation of the fusion of vesicles with the target membranes in both exocytic and endocytic pathways. One member of this family, SYP123, is expressed specifically in the root hairs and accumulated in the growing tip region. This study shows evidence of the SYP123 role in polarized trafficking using knockout insertional mutant plants. We were able to observe defects in the deposition of cell wall proline rich protein PRP3 and cell wall polysaccharides. In a complementary strategy, similar results were obtained using a plant expressing a dominant negative soluble version of SYP123 (SP2 fragment) lacking the transmembrane domain. The evidence presented indicates that SYP123 is also regulating PRP3 protein distribution by recycling by endocytosis. We also present evidence that indicates that SYP123 is necessary for the response of roots to plant growth promoting rhizobacterium (PGPR) in order to trigger trigger induced systemic response (ISR). Plants with a defective SYP123 function were unable to mount a systemic acquired resistance in response to bacterial pathogen infection and ISR upon interaction with rhizobacteria. These results indicated that SYP123 was involved in the polarized localization of protein and polysaccharides in growing root hairs and that this activity also contributed to the establishment of effective plant defense responses. Root hairs represent very plastic structures were many biotic and abiotic factors can affect the number, anatomy and physiology of

  12. Descendant root volume varies as a function of root type: estimation of root biomass lost during uprooting in Pinus pinaster

    Directory of Open Access Journals (Sweden)

    Frédéric eDanjon

    2013-10-01

    Full Text Available Root systems of woody plants generally display a strong relationship between the cross-sectional area (CSA or cross-sectional diameter (CSD of a root and the dry weight of biomass (DWd or root volume (Vd that has grown (i.e., is descendent from that point. Specification of this relationship allows one to quantify root architectural patterns and estimate the amount of material lost when root systems are extracted from the soil. However, specifications of this relationship generally do not account for the fact that root systems are comprised of multiple types of roots. We assessed whether the relationship between CSD and Vd varies as a function of root type. Additionally, we sought to identify a more accurate and time-efficient method for estimating missing root volume than is currently available.We used a database that described the 3D root architecture of Pinus pinaster root systems (5, 12, or 19 yr from a stand. We determined the relationship between CSD and Vd for 10,000 root segments from intact root branches. Models were specified that did and did not account for root type. The relationships were then applied to the diameters of 11,000 broken root ends to estimate the volume of missing roots.CSD was nearly linearly related to the square root of Vd, but the slope of the curve varied greatly as a function of root type. Sinkers and deep roots tapered rapidly, as they were limited by available soil depth. Distal shallow roots tapered gradually, as they were less limited spatially. We estimated that younger trees lost an average of 17% of root volume when excavated, while older trees lost 4%. Missing volumes were smallest in the central parts of root systems and largest in distal shallow roots.The slopes of the curves for each root type are synthetic parameters that account for differentiation due to genetics, soil properties, or mechanical stimuli. Accounting for this differentiation is critical to estimating root loss accurately.

  13. Removal of root filling materials.

    LENUS (Irish Health Repository)

    Duncan, H.F. Chong, B.S.

    2011-05-01

    Safe, successful and effective removal of root filling materials is an integral component of non-surgical root canal re-treatment. Access to the root canal system must be achieved in order to negotiate to the canal terminus so that deficiencies in the original treatment can be rectified. Since a range of materials have been advocated for filling root canals, different techniques are required for their removal. The management of commonly encountered root filling materials during non-surgical re-treatment, including the clinical procedures necessary for removal and the associated risks, are reviewed. As gutta-percha is the most widely used and accepted root filling material, there is a greater emphasis on its removal in this review.

  14. Rooting an Android Device

    Science.gov (United States)

    2015-09-01

    tools that grant root privileges for both Windows and Linux . For the Linux system, open a shell window and use “cd” command to change the directory...defined as a process of gaining administrative commands and functions of an operating system (OS). In order to monitor live network traffic on any... Linux -based or, in this case, Android system, it is necessary to have administrative rights to gain access to any of the hardware devices, such as the

  15. Using coloured roots to study root interaction and competition in intercropped legumes and non-legumes

    DEFF Research Database (Denmark)

    Tosti, Giacomo; Thorup-Kristensen, Kristian

    2010-01-01

    if a species with coloured roots can be used to examine the interaction in a legume-non-legume intercropping system; (ii) to verify the importance of initial root growth on the successive root development of mixture component plants; (iii) to test if the root interaction in the shallow layers has consequences...

  16. Characterization of the low affinity transport system for NO(3)(-) uptake by Citrus roots.

    Science.gov (United States)

    Cerezo, M; Flors, V; Legaz, F; García-Agustín, P

    2000-12-07

    Three-month old citrange Troyer (hybrid of Citrus sinensis x Poncirus trifoliata) seedlings were grown hydroponically and, after a period of NO(3)(-) starvation, plants were transferred to solutions enriched with K(15)NO(3) (96% atoms 15N excess) to measure 15NO(3)(-) uptake rates as a function of external 15NO(3)(-) concentrations. Two different NO(3)(-) uptake systems were found. Between 1 and 50 mM 15NO(3)(-) in the uptake solution medium, the uptake rate increased linearly due to the low affinity transport system (LATS). Nitrate reductase activity showed the same response to external [NO(3)(-)], and also appears to be regulated by the rate of nitrate uptake. Nitrate pre-treatments had a represive effect on NO(3)(-) uptake rate measured at 5 or 30 mM external [15NO(3)(-)]. The extent of the inhibition depended on the [NO(3)(-)] during the pre-treatment and in the uptake solution. These results suggest that the LATS of Citrus seedlings is under feedback control by the N status of the plant. Accordingly, addition of amino acids (Glu, Asp, Asn, Gln) to the uptake solution resulted in a decrease in 15NO(3)(-) uptake rate. However, the inactivation of nitrate reductase activity after treatment of the seedlings with either 100 or 500 µM WO(4)(2-) did not affect the activity of the LATS. Metabolic uncouplers, 2,4-DNP and KCN, reduced the uptake rate by 43.3% and 41.4% respectively at 5mM external [15NO(3)(-)]. However, these compounds had little effect when 15NO(3)(-) uptake was assayed at 30 mM external concentration. The ATPase inhibitors DCCD and DES reduced 15NO(3)(-) uptake by 68.8%-35.6%, at both external [15NO(3)(-)]. Nitrate uptake by the LATS declined with the increase of the solution pH beyond pH 4. The data presented are discussed in the context of the kinetics, energy dependence and regulation of NO(3)(-) uptake.

  17. Systemic inhibition of canonical Notch signaling results in sustained callus inflammation and alters multiple phases of fracture healing.

    Directory of Open Access Journals (Sweden)

    Michael I Dishowitz

    Full Text Available The Notch signaling pathway is an important regulator of embryological bone development, and many aspects of development are recapitulated during bone repair. We have previously reported that Notch signaling components are upregulated during bone fracture healing. However, the significance of the Notch pathway in bone regeneration has not been described. Therefore, the objective of this study was to determine the importance of Notch signaling in regulating bone fracture healing by using a temporally controlled inducible transgenic mouse model (Mx1-Cre;dnMAML(f/- to impair RBPjκ-mediated canonical Notch signaling. The Mx1 promoter was synthetically activated resulting in temporally regulated systemic dnMAML expression just prior to creation of bilateral tibial fractures. This allowed for mice to undergo unaltered embryological and post-natal skeletal development. Results showed that systemic Notch inhibition prolonged expression of inflammatory cytokines and neutrophil cell inflammation, and reduced the proportion of cartilage formation within the callus at 10 days-post-fracture (dpf Notch inhibition did not affect early bone formation at 10dpf, but significantly altered bone maturation and remodeling at 20dpf. Increased bone volume fraction in dnMAML fractures, which was due to a moderate decrease in callus size with no change in bone mass, coincided with increased trabecular thickness but decreased connectivity density, indicating that patterning of bone was altered. Notch inhibition decreased total osteogenic cell density, which was comprised of more osteocytes rather than osteoblasts. dnMAML also decreased osteoclast density, suggesting that osteoclast activity may also be important for altered fracture healing. It is likely that systemic Notch inhibition had both direct effects within cell types as well as indirect effects initiated by temporally upstream events in the fracture healing cascade. Surprisingly, Notch inhibition did not alter

  18. The Roots Of Alienation

    Science.gov (United States)

    Bronfenbrenner, Urie

    1973-01-01

    Alienation in our society takes several forms--withdrawal, hostility, or efforts to reform. The author traces the roots of alienation to our neglect of many of the needs of children, particularly their need for interaction with adults. Among his many recommendations are: modified work schedules to permit more time with children and systems for…

  19. A maize root tip system to study DNA replication programmes in somatic and endocycling nuclei during plant development.

    Science.gov (United States)

    Bass, Hank W; Wear, Emily E; Lee, Tae-Jin; Hoffman, Gregg G; Gumber, Hardeep K; Allen, George C; Thompson, William F; Hanley-Bowdoin, Linda

    2014-06-01

    The progress of nuclear DNA replication is complex in both time and space, and may reflect several levels of chromatin structure and 3-dimensional organization within the nucleus. To understand the relationship between DNA replication and developmental programmes, it is important to examine replication and nuclear substructure in different developmental contexts including natural cell-cycle progressions in situ. Plant meristems offer an ideal opportunity to analyse such processes in the context of normal growth of an organism. Our current understanding of large-scale chromosomal DNA replication has been limited by the lack of appropriate tools to visualize DNA replication with high resolution at defined points within S phase. In this perspective, we discuss a promising new system that can be used to visualize DNA replication in isolated maize (Zea mays L.) root tip nuclei after in planta pulse labelling with the thymidine analogue, 5-ethynyl-2'-deoxyuridine (EdU). Mixed populations of EdU-labelled nuclei are then separated by flow cytometry into sequential stages of S phase and examined directly using 3-dimensional deconvolution microscopy to characterize spatial patterns of plant DNA replication. Combining spatiotemporal analyses with studies of replication and epigenetic inheritance at the molecular level enables an integrated experimental approach to problems of mitotic inheritance and cellular differentiation.

  20. Exogenous glutathione improves high root-zone temperature tolerance by modulating photosynthesis, antioxidant and osmolytes systems in cucumber seedlings

    Science.gov (United States)

    Ding, Xiaotao; Jiang, Yuping; He, Lizhong; Zhou, Qiang; Yu, Jizhu; Hui, Dafeng; Huang, Danfeng

    2016-01-01

    To investigate the physiological responses of plants to high root-zone temperature (HT, 35 °C) stress mitigated by exogenous glutathione (GSH), cucumber (Cucumis sativus L.) seedlings were exposed to HT with or without GSH treatment for 4 days and following with 4 days of recovery. Plant physiological variables, growth, and gene expression related to antioxidant enzymes and Calvin cycle were quantified. The results showed that HT significantly decreased GSH content, the ratio of reduced to oxidized glutathione (GSH/GSSG), chlorophyll content, photosynthesis and related gene expression, shoot height, stem diameter, as well as dry weight. The exogenous GSH treatment clearly lessened the HT stress by increasing the above variables. Meanwhile, HT significantly increased soluble protein content, proline and malondialdehyde (MDA) content as well as O2•− production rate, the gene expression and activities of antioxidant enzymes. The GSH treatment remarkably improved soluble protein content, proline content, antioxidant enzymes activities, and antioxidant enzymes related gene expression, and reduced the MDA content and O2•− production rate compared to no GSH treatment in the HT condition. Our results suggest that exogenous GSH enhances cucumber seedling tolerance of HT stress by modulating the photosynthesis, antioxidant and osmolytes systems to improve physiological adaptation. PMID:27752105

  1. Competition for water between deep- and shallow-rooted grasses

    Energy Technology Data Exchange (ETDEWEB)

    Healy, J.L.; Black, R.A. (Washington State Univ., Pullman, WA (United States)); Link, S.O. (Pacific Northwest Laboratory, Richland, WA (United States))

    1994-06-01

    Competition between root systems of neighboring plants may be altered by seasonal variation in precipitation and soil moisture. Competitive effects of a deep-rooted, perennial grass, Pseudoroegneria spicata, on a shallow-rooted, perennial grass, Poa sandbergii, were monitored over two growing seasons by isolating the root system of P. sandbergii individuals within PVC tubes and comparing plant and soil characteristics to controls. When isolated for the entire growing season, P. sandbergii continued vegetative growth three weeks longer and later season soil water content was significantly greater than controls. Differences in soil water content were greatest between 30 and 50cm, below P. sandbergii's typical rooting depth. Flowering phenology was unchanged. When plants were isolated late in the season, treated plants showed more negative predown xylem pressure potential the morning after isolatron. Compared to controls, soil water content was reduced the day after tube insertion. These immediate effects on plant and soil water status may be due to removal of water supplied nightly by hydraulic lift.

  2. Pathogenic LRRK2 mutations do not alter gene expression in cell model systems or human brain tissue.

    Directory of Open Access Journals (Sweden)

    Michael J Devine

    Full Text Available Point mutations in LRRK2 cause autosomal dominant Parkinson's disease. Despite extensive efforts to determine the mechanism of cell death in patients with LRRK2 mutations, the aetiology of LRRK2 PD is not well understood. To examine possible alterations in gene expression linked to the presence of LRRK2 mutations, we carried out a case versus control analysis of global gene expression in three systems: fibroblasts isolated from LRRK2 mutation carriers and healthy, non-mutation carrying controls; brain tissue from G2019S mutation carriers and controls; and HEK293 inducible LRRK2 wild type and mutant cell lines. No significant alteration in gene expression was found in these systems following correction for multiple testing. These data suggest that any alterations in basal gene expression in fibroblasts or cell lines containing mutations in LRRK2 are likely to be quantitatively small. This work suggests that LRRK2 is unlikely to play a direct role in modulation of gene expression, although it remains possible that this protein can influence mRNA expression under pathogenic cicumstances.

  3. Investigation of Lab Fire Prevention Management System of Combining Root Cause Analysis and Analytic Hierarchy Process with Event Tree Analysis

    OpenAIRE

    Cheng-Chan Shih; Horng, Richard S.; Shin-Ku Lee

    2016-01-01

    This paper proposed a new approach, combining root cause analysis (RCA), analytic hierarchy process (AHP), and event tree analysis (ETA) in a loop to systematically evaluate various laboratory safety prevention strategies. First, 139 fire accidents were reviewed to identify the root causes and draw out prevention strategies. Most fires were caused due to runaway reactions, operation error and equipment failure, and flammable material release. These mostly occurred in working places of no prom...

  4. Inducible expression of Pisum sativum xyloglucan fucosyltransferase in the pea root cap meristem, and effects of antisense mRNA expression on root cap cell wall structural integrity.

    Science.gov (United States)

    Wen, Fushi; Celoy, Rhodesia M; Nguyen, Trang; Zeng, Weiqing; Keegstra, Kenneth; Immerzeel, Peter; Pauly, Markus; Hawes, Martha C

    2008-07-01

    Mitosis and cell wall synthesis in the legume root cap meristem can be induced and synchronized by the nondestructive removal of border cells from the cap periphery. Newly synthesized cells can be examined microscopically as they differentiate progressively during cap development, and ultimately detach as a new population of border cells. This system was used to demonstrate that Pisum sativum L. fucosyl transferase (PsFut1) mRNA expression is strongly expressed in root meristematic tissues, and is induced >2-fold during a 5-h period when mitosis in the root cap meristem is increased. Expression of PsFut1 antisense mRNA in pea hairy roots under the control of the CaMV35S promoter, which exhibits meristem localized expression in pea root caps, resulted in a 50-60% reduction in meristem localized endogenous PsFut1 mRNA expression measured using whole mount in situ hybridization. Changes in gross levels of cell wall fucosylated xyloglucan were not detected, but altered surface localization patterns were detected using whole mount immunolocalization with CCRC-M1, an antibody that recognizes fucosylated xyloglucan. Emerging hairy roots expressing antisense PsFut1 mRNA appeared normal macroscopically but scanning electron microscopy of tissues with altered CCRC-M1 localization patterns revealed wrinkled, collapsed cell surfaces. As individual border cells separated from the cap periphery, cell death occurred in correlation with extrusion of cellular contents through breaks in the wall.

  5. Cytokinin-induced promotion of root meristem size in the fern Azolla supports a shoot-like origin of euphyllophyte roots

    NARCIS (Netherlands)

    de Vries, Jan; Fischer, Angela Melanie; Roettger, Mayo; Rommel, Sophie; Schluepmann, Henriette; Bräutigam, Andrea; Carlsbecker, Annelie; Gould, Sven Bernhard

    2016-01-01

    The phytohormones cytokinin and auxin orchestrate the root meristem development in angiosperms by determining embryonic bipolarity. Ferns, having the most basal euphyllophyte root, form neither bipolar embryos nor permanent embryonic primary roots but rather an adventitious root system. This raises

  6. Construction and research of embedded Linux NFS root file system%嵌入式Linux NFS根文件系统的构建及研究

    Institute of Scientific and Technical Information of China (English)

    康天下; 支剑锋

    2012-01-01

    在嵌入式Linux系统开发过程中,根文件系统是构建嵌入式Linux系统的重要组成部分.为了方便和简化嵌入式Linux开发过程中的调试过程,主要研究了如何使用Busybox构建出基本的嵌入式Linux根文件系统,包括Busybox的配置、编译和安装.在此基础上,进一步构建出基于NFS的嵌入式Linux根文件系统,并给出了启动脚本和配置文件.这种根文件系统可以方便地在线更改、调试程序,降低了嵌入式系统的开发门槛.%In the process of the embedded Linux system development, the root file system is an important part of building the embedded Linux system. In order to facilitate and simplify the debugging phase of embedded Linux development process, this paper mainly researches how to build a basic embedded Linux root file system with Busybox, including the configuration, installation and compilation of Busybox. On this base, the NFS-based embedded Linux root file system was built. The startup script and configuration file are given in this paper. This root file system can be easily changed and debugged online, and reduces the threshold of embedded systems development.

  7. Comparative study of the active cadmium efflux systems operating at the plasma membrane and tonoplast of cucumber root cells.

    Science.gov (United States)

    Migocka, Magdalena; Papierniak, Anna; Kosatka, Ewelina; Klobus, Grazyna

    2011-10-01

    The strategies developed by plants to avoid the toxicity of cadmium (Cd) and other heavy metals involve active sequestration of metals into the apoplast and vacuoles. The protein systems excluding heavy metals from the cell cytosol localize to the plasma membrane and tonoplast and are energized either by ATP or by the electrochemical gradient generated by H(+)-ATPase or by V-ATPase and pyrophosphatase (PPase), respectively. In this work, a comparative study on the contribution of both the plasma membrane and tonoplast in the active detoxification of plant cells after treatment with Cd was performed. The studies using plants treated and untreated with Cd reveal that both, H(+)-coupled and MgATP-driven efflux of Cd across plasma membranes and tonoplast is markedly stimulated in the presence of Cd in the environment. Previous studies on plasma-membrane localized H(+)-coupled Cd efflux together with the present data demonstrating tonoplast H(+)/Cd(2+) antiport activity suggest that H(+)-coupled secondary transport of Cd displays a lower affinity for Cd when compared with Cd primary pumps driven by MgATP. In addition, it is shown that MgATP-energized Cd efflux across both membranes is significantly enhanced by cysteine, dithiothreitol, and glutathione. These results suggest that Cd is excluded from the cytosol through an energy-dependent system as a free ion as well as a complexed form. Although both membranes contribute in the active exclusion of ionized and complexed Cd from the cytosol, the overall calculation of Cd accumulation in the everted plasma membranes and vacuolar vesicles suggests that the tonoplast and vacuole have a major function in Cd efflux from the cytosol in the roots of cucumber subjected to Cd stress.

  8. Encapsulation altered starch digestion: toward developing starch-based delivery systems.

    Science.gov (United States)

    Janaswamy, Srinivas

    2014-01-30

    Starch is an abundant biomaterial that forms a vital energy source for humans. Altering its digestion, e.g. increasing the proportions of slowly digestible starch (SDS) and resistant starch (RS), would revolutionize starch utility in addressing a number of health issues related to glucose absorption, glycemic index and colon health. The research reported in this article is based on my hypothesis that water channels present in the B-type starch crystalline matrix, particularly in tuber starches, can embed guest molecules such as nutraceuticals, drugs, flavor compounds and vitamins leading to altered starch digestion. Toward this goal, potato starch has been chosen as the model tuber starch, and ibuprofen, benzocaine, sulfapyridine, curcumin, thymol and ascorbic acid as model guest molecules. X-ray powder diffraction and FT-IR analyses clearly suggest the incorporation of guest molecules in the water channels of potato starch. Furthermore, the in vitro digestion profiles of complexes are intriguing with major variations o