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Sample records for alkane monolayers studied

  1. Comparative study of normal and branched alkane monolayer films adsorbed on a solid surface. II. Dynamics

    DEFF Research Database (Denmark)

    Enevoldsen, Ann Dorrit; Hansen, Flemming Yssing; Diama, A.;

    2007-01-01

    The dynamics of monolayer films of the n-alkane tetracosane (n-C24H52) and the branched alkane squalane (C30H62) adsorbed on graphite have been studied by quasielastic and inelastic neutron scattering and molecular dynamics (MD) simulations. Both molecules have 24 carbon atoms along their carbon...... on very different time scales: 1-40 ps (DCS) and 0.1-4 ns (HFBS). The MD simulations were done on corresponding time scales and were used to interpret the neutron spectra. The authors found that the dynamics of the two monolayers are qualitatively similar on the respective time scales...

  2. Comparative study of normal and branched alkane monolayer films adsorbed on a solid surface. I. Structure

    DEFF Research Database (Denmark)

    Enevoldsen, Ann Dorrit; Hansen, Flemming Yssing; Diama, A.;

    2007-01-01

    The structure of a monolayer film of the branched alkane squalane (C30H62) adsorbed on graphite has been studied by neutron diffraction and molecular dynamics (MD) simulations and compared with a similar study of the n-alkane tetracosane (n-C24H52). Both molecules have 24 carbon atoms along...... their backbone and squalane has, in addition, six methyl side groups. Upon adsorption, there are significant differences as well as similarities in the behavior of these molecular films. Both molecules form ordered structures at low temperatures; however, while the melting point of the two-dimensional (2D...... temperature. The neutron diffraction data show that the translational order in the squalane monolayer is significantly less than in the tetracosane monolayer. The authors' MD simulations suggest that this is caused by a distortion of the squalane molecules upon adsorption on the graphite surface. When...

  3. Comparative study of normal and branched alkane monolayer films adsorbed on a solid surface. II. Dynamics

    Science.gov (United States)

    Enevoldsen, A. D.; Hansen, F. Y.; Diama, A.; Taub, H.; Dimeo, R. M.; Neumann, D. A.; Copley, J. R. D.

    2007-03-01

    The dynamics of monolayer films of the n-alkane tetracosane (n-C24H52) and the branched alkane squalane (C30H62) adsorbed on graphite have been studied by quasielastic and inelastic neutron scattering and molecular dynamics (MD) simulations. Both molecules have 24 carbon atoms along their carbon backbone, and squalane has an additional six methyl side groups symmetrically placed along its length. The authors' principal objective has been to determine the influence of the side groups on the dynamics of the squalane monolayer and thereby assess its potential as a nanoscale lubricant. To investigate the dynamics of these monolayers they used both the disk chopper spectrometer (DCS) and the high flux backscattering spectrometer (HFBS) at the National Institute of Standards and Technology. These instruments made it possible to study dynamical processes such as molecular diffusive motions and vibrations on very different time scales: 1-40ps (DCS) and 0.1-4ns (HFBS). The MD simulations were done on corresponding time scales and were used to interpret the neutron spectra. The authors found that the dynamics of the two monolayers are qualitatively similar on the respective time scales and that there are only small quantitative differences that can be understood in terms of the different masses and moments of inertia of the two molecules. In the course of this study, the authors developed a procedure to separate out the low-frequency vibrational modes in the spectra, thereby facilitating an analysis of the quasielastic scattering. They conclude that there are no major differences in the monolayer dynamics caused by intramolecular branching. It remains to be seen whether this similarity in monolayer dynamics also holds for the lubricating properties of these molecules in confined geometries.

  4. Comparative study of normal and branched alkane monolayer films adsorbed on a solid surface. I. Structure

    Science.gov (United States)

    Enevoldsen, A. D.; Hansen, F. Y.; Diama, A.; Criswell, L.; Taub, H.

    2007-03-01

    The structure of a monolayer film of the branched alkane squalane (C30H62) adsorbed on graphite has been studied by neutron diffraction and molecular dynamics (MD) simulations and compared with a similar study of the n-alkane tetracosane (n-C24H52). Both molecules have 24 carbon atoms along their backbone and squalane has, in addition, six methyl side groups. Upon adsorption, there are significant differences as well as similarities in the behavior of these molecular films. Both molecules form ordered structures at low temperatures; however, while the melting point of the two-dimensional (2D) tetracosane film is roughly the same as the bulk melting point, the surface strongly stabilizes the 2D squalane film such that its melting point is 91K above its value in bulk. Therefore, squalane, like tetracosane, will be a poor lubricant in those nanoscale devices that require a fluid lubricant at room temperature. The neutron diffraction data show that the translational order in the squalane monolayer is significantly less than in the tetracosane monolayer. The authors' MD simulations suggest that this is caused by a distortion of the squalane molecules upon adsorption on the graphite surface. When the molecules are allowed to relax on the surface, they distort such that all six methyl groups point away from the surface. This results in a reduction in the monolayer's translational order characterized by a decrease in its coherence length and hence a broadening of the diffraction peaks. The MD simulations also show that the melting mechanism in the squalane monolayer is the same footprint reduction mechanism found in the tetracosane monolayer, where a chain melting drives the lattice melting.

  5. A Comparison of the Monolayer Dynamics of the Branched Alkane Squalane and the Normal Alkane Tetracosane Adsorbed on Graphite

    Science.gov (United States)

    Enevoldsen, A. D.; Hansen, F. Y.; Diama, A.; Taub, H.

    2004-03-01

    Squalane is a branched alkane (C_30H_62) with 24 carbon atoms in its backbone, like the normal alkane tetracosane ( n-C_24H_50), and six symmetrically placed methyl side groups. In general, branched alkanes such as squalane are better lubricants than n-alkanes. We have studied the dynamics of the squalane and tetracosane monolayers by quasielastic neutron scattering and molecular dynamics (MD) simulations on two different time scales. Both experiments and simulations showed that diffusion at 260 K is about 2.5 times faster in the squalane than in the tetracosane system. It is somewhat surprising that the diffusion in a system with a branched alkane is faster than with a normal alkane. A possible explanation is that the squalane molecule does not bind as strongly to the surface as tetracosane, because the MD simulations have shown that the adsorbed molecules have a distorted backbone. This may also explain why the slow intramolecular motions associated with conformational changes are seen at lower temperatures in the squalane than the tetracosane monolayer where they are only observed near melting.

  6. Surfactant-induced phases in water-supported alkane monolayers: I. Thermodynamics.

    Science.gov (United States)

    Yefet, Shai; Sloutskin, Eli; Tamam, Lilach; Sapir, Zvi; Cohen, Asaf; Deutsch, Moshe; Ocko, Benjamin M

    2014-07-15

    Alkanes longer than n = 6 carbons do not spread on the water surface, but condense in a macroscopic lens. However, adding trimethylammonium-based surfactants, C(m)TAB, in submillimolar concentrations causes the alkanes to spread and form a single Langmuir-Gibbs (LG) monolayer of mixed alkanes and surfactant tails, which coexists with the alkane lenses. Upon cooling, this LG film surface-freezes at a temperature T(s) above the bulk freezing temperature T(b). The thermodynamics of surface freezing (SF) of these LG films is studied by surface tension measurements for a range of alkanes (n = 12-21) and surfactant alkyl lengths (m = 14, 16, 18), at several concentrations c. The surface freezing range T(s)-T(b) observed is up to 25 °C, an order of magnitude larger than the temperature range of SF monolayers on the surface of pure alkane melts. The measured (n,T) surface phase diagram is accounted for well by a model based on mixtures' theory, which includes an interchange energy term ω. ω is found to be negative, implying attraction between unlike species, rather than the repulsion found for SF of binary alkane mixtures. Thus, the surfactant/alkane mixing is a necessary condition for the occurrence of SF in these LG films. The X-ray derived structure of the films is presented in an accompanying paper. PMID:24918482

  7. Structure and phase transitions of monolayers of intermediate-length n-alkanes on graphite studied by neutron diffraction and molecular dynamics simulation

    DEFF Research Database (Denmark)

    Diama, A.; Matthies, B.; Herwig, K. W.;

    2009-01-01

    surface. Upon heating, the crystalline monolayers transform to a "smectic" phase in which the inter-row spacing within a lamella expands by similar to 10% and the molecules are predominantly oriented with the carbon skeletal plane parallel to the graphite surface. In the smectic phase, the MD simulations......We present evidence from neutron diffraction measurements and molecular dynamics (MD) simulations of three different monolayer phases of the intermediate-length alkanes tetracosane (n-C24H50 denoted as C24) and dotriacontane (n-C32H66 denoted as C32) adsorbed on a graphite basal-plane surface. Our...... measurements indicate that the two monolayer films differ principally in the transition temperatures between phases. At the lowest temperatures, both C24 and C32 form a crystalline monolayer phase with a rectangular-centered (RC) structure. The two sublattices of the RC structure each consists of parallel rows...

  8. Intramolecular diffusive motion in alkane monolayers studied by high-resolution quasielastic neutron scattering and molecular dynamics simulations

    DEFF Research Database (Denmark)

    Hansen, Flemming Yssing; Criswell, L.; Fuhrmann, D;

    2004-01-01

    Molecular dynamics simulations of a tetracosane (n-C24H50) monolayer adsorbed on a graphite basal-plane surface show that there are diffusive motions associated with the creation and annihilation of gauche defects occurring on a time scale of similar to0.1-4 ns. We present evidence...

  9. Structure and Phase Transitions of Monolayers of Intermediate-length n-alkanes on Graphite Studied by Neutron Diffraction and Molecular Dynamics Simulation

    Energy Technology Data Exchange (ETDEWEB)

    Taub, H. [University of Missouri, Columbia; Hansen, F.Y. [Technical University of Denmark; Diama, Amand [National University of the Ivory Coast; Matthies, Blake [Goodyear Tire and Rubber Company, The; Criswell, Leah [University of Missouri, Columbia; Mo, Haiding [Advanced Optowave Corporation; Bai, M [University of Missouri, Columbia; Herwig, Kenneth W [ORNL

    2009-01-01

    We present evidence from neutron diffraction measurements and molecular dynamics (MD) simulations of three different monolayer phases of the intermediate-length alkanes tetracosane (n-C(24)H(50) denoted as C24) and dotriacontane (n-C(32)H(66) denoted as C32) adsorbed on a graphite basal-plane surface. Our measurements indicate that the two monolayer films differ principally in the transition temperatures between phases. At the lowest temperatures, both C24 and C32 form a crystalline monolayer phase with a rectangular-centered (RC) structure. The two sublattices of the RC structure each consists of parallel rows of molecules in their all-trans conformation aligned with their long axis parallel to the surface and forming so-called lamellas of width approximately equal to the all-trans length of the molecule. The RC structure is uniaxially commensurate with the graphite surface in its [110] direction such that the distance between molecular rows in a lamella is 4.26 A=sqrt[3a(g)], where a(g)=2.46 A is the lattice constant of the graphite basal plane. Molecules in adjacent rows of a lamella alternate in orientation between the carbon skeletal plane being parallel and perpendicular to the graphite surface. Upon heating, the crystalline monolayers transform to a 'smectic' phase in which the inter-row spacing within a lamella expands by approximately 10% and the molecules are predominantly oriented with the carbon skeletal plane parallel to the graphite surface. In the smectic phase, the MD simulations show evidence of broadening of the lamella boundaries as a result of molecules diffusing parallel to their long axis. At still higher temperatures, they indicate that the introduction of gauche defects into the alkane chains drives a melting transition to a monolayer fluid phase as reported previously.

  10. Structure and phase transitions of monolayers of intermediate-length n-alkanes on graphite studied by neutron diffraction and molecular dynamics simulation.

    Science.gov (United States)

    Diama, A; Matthies, B; Herwig, K W; Hansen, F Y; Criswell, L; Mo, H; Bai, M; Taub, H

    2009-08-28

    We present evidence from neutron diffraction measurements and molecular dynamics (MD) simulations of three different monolayer phases of the intermediate-length alkanes tetracosane (n-C(24)H(50) denoted as C24) and dotriacontane (n-C(32)H(66) denoted as C32) adsorbed on a graphite basal-plane surface. Our measurements indicate that the two monolayer films differ principally in the transition temperatures between phases. At the lowest temperatures, both C24 and C32 form a crystalline monolayer phase with a rectangular-centered (RC) structure. The two sublattices of the RC structure each consists of parallel rows of molecules in their all-trans conformation aligned with their long axis parallel to the surface and forming so-called lamellas of width approximately equal to the all-trans length of the molecule. The RC structure is uniaxially commensurate with the graphite surface in its [110] direction such that the distance between molecular rows in a lamella is 4.26 A=sqrt[3a(g)], where a(g)=2.46 A is the lattice constant of the graphite basal plane. Molecules in adjacent rows of a lamella alternate in orientation between the carbon skeletal plane being parallel and perpendicular to the graphite surface. Upon heating, the crystalline monolayers transform to a "smectic" phase in which the inter-row spacing within a lamella expands by approximately 10% and the molecules are predominantly oriented with the carbon skeletal plane parallel to the graphite surface. In the smectic phase, the MD simulations show evidence of broadening of the lamella boundaries as a result of molecules diffusing parallel to their long axis. At still higher temperatures, they indicate that the introduction of gauche defects into the alkane chains drives a melting transition to a monolayer fluid phase as reported previously.

  11. Ordered Self-assembled Alkane Monolayer on Graphite and Graphene Surface

    Science.gov (United States)

    Su, Yudan; Han, Huiling; Wang, Feng; Cai, Qun; Tian, Chuanshan; Shen, Y. R.

    2015-03-01

    The 2D self-assembly of long chain alkane molecule on graphite and graphene had been studied with phase-sensitive sum-frequency vibrational spectroscopy (PS-SFVS) and scanning tunneling microscopy (STM). The spectrum of Imχs(2) (ωIR) which directly characterizes the surface resonances, shows 10-cm-1 red-shift of the symmetric-stretch frequency of the CH2 groups pointing towards graphite (or graphene) surface indicating Van der Waals interaction in between. The Gibbs adsorption energy of polyethylene (PE, n ~ 140) on graphite from chloroform solution was determined to be -42kJ/mol per molecule or -0.6 kJ/mol per CH2 unit. This large adsorption energy drives the long alkane chain to form an ordered self-assembled monolayer on graphite (or graphene). The sum frequency spectra suggest the orientation of carbon skeleton plane of alkane is predominately perpendicular to the graphite/graphene surface. Our STM result also provides clear evidence for the proposed molecular adsorption model. These results explain the large amount residual of long chain alkane on polystyrene (PS) or poly(methyl methacrylate) (PMMA) transferred graphene, and facilitate a better way to fabricate cleaner large-size graphene.

  12. Contact forces at the sliding interface: Mixed versus pure model alkane monolayers

    Science.gov (United States)

    Mikulski, Paul T.; Gao, Guangtu; Chateauneuf, Ginger M.; Harrison, Judith A.

    2005-01-01

    Classical molecular dynamics simulations of an amorphous carbon tip sliding against monolayers of n-alkane chains are presented. The tribological behavior of tightly packed, pure monolayers composed of chains containing 14 carbon atoms is compared to mixed monolayers that randomly combine equal amounts of 12- and 16-carbon-atom chains. When sliding in the direction of chain cant under repulsive (positive) loads, pure monolayers consistently show lower friction than mixed monolayers. The distribution of contact forces between individual monolayer chain groups and the tip shows pure and mixed monolayers resist tip motion similarly. In contrast, the contact forces "pushing" the tip along differ in the two monolayers. The pure monolayers exhibit a high level of symmetry between resisting and pushing forces which results in a lower net friction. Both systems exhibit a marked friction anisotropy. The contact force distribution changes dramatically as a result of the change in sliding direction, resulting in an increase in friction. Upon continued sliding in the direction perpendicular to chain cant, both types of monolayers are often capable of transitioning to a state where the chains are primarily oriented with the cant along the sliding direction. A large change in the distribution of contact forces and a reduction in friction accompany this transition.

  13. Intramolecular and Lattice Melting in n-Alkane Monolayers: An Analog of Melting in Lipid Bilayers

    DEFF Research Database (Denmark)

    Hansen, Flemming Yssing; Herwig, K.W.; Matthies, B.;

    1999-01-01

    Molecular dynamics (MD) simulations and neutron diffraction experiments have been performed on n-dotriacontane (n-C32D66) monolayers adsorbed on a graphite basal-plane surface. The diffraction experiments show little change in the crystalline monolayer structure up to a temperature of similar...... to 350 K above which a large thermal expansion and decrease in coherence length occurs. The MD simulations provide evidence that this behavior is due to a phase transition in the monolayer in which intramolecular and translational order are lost simultaneously. This melting transition is qualitatively...

  14. Molecular dynamics study of the water/n-alkane interface

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    Molecular dynamics simulations on the interface between liquid water and liquid n-alkane (including octane, nonane, decane, undecane and dodecane) have been performed with the purpose to study the interfacial properties: (Ⅰ) density profile; (Ⅱ) molecular orientation; (Ⅲ) interfacial tension and the temperature effect on the interfacial tension. Simulation results show that at the interface the structures of both water and n-alkane are different from those in the bulk. Water has an orientational preference due to the number of hydrogen bonds per molecule maximized. N-alkane has a more lateral orientation with respect to the interface in order to be in close contact with water. The calculated individual phase bulk density and interfacial tension of water/n-alkane systems are in good agreement with the corresponding experimental ones.

  15. Formation of Underbrushes on thiolated Poly (ethylene glycol) PEG monolayers by Oligoethylene glycol (OEG) terminated Alkane Thiols on Gold

    DEFF Research Database (Denmark)

    Lokanathan, Arcot R.

    2011-01-01

    Adding underbrushes of oligoethylene glycol (OEG) to monolayers of long chain PEG molecules on a surface is one of the strategies [1] in designing a suitable platform for antifouling purpose, where it is possible to have high graft density and molecular conformational freedom[4] simultaneously......, there by maximal retention of activity of covalently immobilised antifouling enzyme [2] on PEG surfaces along with resistance to protein adsorption[3]. Here we present some our studies on the addition of OEG thiol molecules over a self assembled monolayer of PEG thiol on gold. The kinetics of addition...... of OEG thiol to monolayers of PEG thiol was followed using X- ray photoelectron spectroscopy (XPS), which indicated the time point of maximum graft density and beyond this time point there was predominant desorption of OEG thiol as indicated by the C/O ratio. The initial increase in graft density was...

  16. Theoretical study of n-alkane adsorption on metal surfaces

    DEFF Research Database (Denmark)

    Morikawa, Yoshitada; Ishii, Hisao; Seki, Kazuhiko

    2004-01-01

    The interaction between n-alkane and metal surfaces has been studied by means of density-functional theoretical calculations within a generalized gradient approximation (GGA). We demonstrate that although the GGA cannot reproduce the physisorption energy well, our calculations can reproduce the e...

  17. Neutron diffraction and quasielastic neutron scattering studies of films of intermediate-length alkanes adsorbed on a graphite surface

    Science.gov (United States)

    Diama, Armand

    Over the past several years, we have conducted a variety of elastic neutron diffraction and quasielastic neutron scattering experiments to study the structure and the dynamics of films of two intermediate-length alkane molecules (C nH2n+2), adsorbed on a graphite basal-plane surface. The two molecules are the normal alkane n-tetracosane [n-CH 3(CH2)22CH3] and the branched alkane squalane (C30H62 or 2, 6, 10, 15, 19, 23-hexamethyltetracosane) whose carbon backbone is the same length as teteracosane. The temperature dependence of the monolayer structure of tetracosane and squalane was investigated using elastic neutron diffraction and evidence of two phase transitions was observed. Both the low-coverage tetracosane (C 24H50) and squalane (C30H62) monolayers have crystalline-to-"smectic" and "smectic"-to-isotropic fluid phase transitions upon heating. The diffusive motion in the tetracosane and squalane monolayers has been investigated by quasielastic neutron scattering. Two different quasielastic neutron scattering spectrometers at the Center for Neutron Research, National Institute of Standards and Technology (NIST) have been used. The spectrometers differ in both their dynamic range and energy resolution allowing molecular motions to be investigated on time scales in the range 10-13--10 -9 s. On these time scales, we observe evidence of translational, rotational, and intermolecular diffusive motions in the tetracosane and squalane monolayers. We conclude that the molecular diffusive motion in the two monolayers is qualitatively similar. Thus, despite the three methyl sidegroups at each end of the squalane molecule, its monolayer structure, phase transitions, and dynamics are qualitatively similar to that of a monolayer of the unbranched tetracosane molecules. With the higher resolution spectrometer at NIST, we have also investigated the molecular diffusive motion in multilayer tetracosane films. The analysis of our measurements indicates slower diffusive motion in

  18. Spectrin-phospholipid interaction. A monolayer study

    NARCIS (Netherlands)

    Mombers, C.; Gier, J. de; Demel, R.A.; Deenen, L.L.M. van

    1980-01-01

    1.(1) The interaction of synthetic and natural phospholipids with spectrin, purified from human erythrocyte membranes, was studied using the monolayer technique at constant surface pressure. Spectrin penetration into the lipid monolayer was recorded as the rate of surface area increase on a two-comp

  19. Two-Step Freezing in Alkane Monolayers on Colloidal Silica Nanoparticles: From a Stretched-Liquid to an Interface-Frozen State.

    Science.gov (United States)

    Gao, Xia; Huber, Patrick; Su, Yunlan; Zhao, Weiwei; Wang, Dujin

    2016-08-01

    The crystallization behavior of an archetypical soft/hard hybrid nanocomposite, that is, an n-octadecane C18/SiO2-nanoparticle composite, was investigated by a combination of differential scanning calorimetry (DSC) and variable-temperature solid-state (13)C nuclear magnetic resonance (VT solid-state (13)C NMR) as a function of silica nanoparticles loading. Two latent heat peaks prior to bulk freezing, observed for composites with high silica loading, indicate that a sizable fraction of C18 molecules involve two phase transitions unknown from the bulk C18. Combined with the NMR measurements as well as experiments on alkanes and alkanols at planar amorphous silica surfaces reported in the literature, this phase behavior can be attributed to a transition toward a 2D liquid-like monolayer and subsequently a disorder-to-order transition upon cooling. The second transition results in the formation of a interface-frozen monolayer of alkane molecules with their molecular long axis parallel to the nanoparticles' surface normal. Upon heating, the inverse phase sequence was observed, however, with a sizable thermal hysteresis in accord with the characteristics of the first-order phase transition. A thermodynamic model considering a balance of interfacial bonding, chain stretching elasticity, and entropic effects quantitatively accounts for the observed behavior. Complementary synchrotron-based wide-angle X-ray diffraction (WAXD) experiments allow us to document the strong influence of this peculiar interfacial freezing behavior on the surrounding alkane melts and in particular the nucleation of a rotator phase absent in the bulk C18. PMID:27386888

  20. Spontaneous Imbibition Dynamics of an n-Alkane in Nanopores: Evidence of Meniscus Freezing and Monolayer Sticking

    CERN Document Server

    Gruener, Simon; 10.1103/PhysRevLett.103.174501

    2009-01-01

    Capillary filling dynamics of liquid n-tetracosane (n-C24H50) in a network of cylindrical pores with 7 and 10 nm mean diameter in monolithic silica glass (Vycor) exhibit an abrupt temperature-slope change at Ts=54 deg C, ~4 deg C above bulk and ~16 deg C, 8 deg C, respectively, above pore freezing. It can be traced to a sudden inversion of the surface tension's T slope, and thus to a decrease in surface entropy at the advancing pore menisci, characteristic of the formation of a single solid monolayer of rectified molecules, known as surface freezing from macroscopic, quiescent tetracosane melts. The imbibition speeds, that are the squared prefactors of the observed square-root-of-time Lucas-Washburn invasion kinetics, indicate a conserved bulk fluidity and capillarity of the nanopore-confined liquid, if we assume a flat lying, sticky hydrocarbon backbone monolayer at the silica walls.

  1. Desorption of n-alkanes from graphene: a van der Waals density functional study

    OpenAIRE

    Londero, Elisa; Karlson, Emma K.; Landahl, Marcus; Ostrovskii, Dimitri; Rydberg, Jonatan D.; Schröder, Elsebeth

    2012-01-01

    A recent study of temperature programmed desorption (TPD) measurements of small n-alkanes (CNH2N+2) from C(0001) deposited on Pt(111) shows a linear relationship of the desorption energy with increasing n-alkane chain length. We here present a van der Waals density functional study of the desorption barrier energy of the ten smallest n-alkanes (N = 1 to 10) from graphene. We find linear scaling with N, including a nonzero intercept with the energy axis, i.e., an offset at the extrapolation to...

  2. Composition index of n-alkanes and paleoenvironmental study in sediments of the Arctic

    Institute of Scientific and Technical Information of China (English)

    Lu Bing; Zhou Huaiyang; Wang Zipan; Lu Douding

    2001-01-01

    This paper reports different concentration patterns of n-alkanes distribution in the sediments from the Chukchi Sea, the Bering Sea in the Arctic. Factor statistical analysis method is used for studying the source of n-alkanes and paleoenviroment. The result shows that n-alkanes is in the range of nC15~nC33 and n-alkane distribution patterns are characterized by two modes. The first mode belongs to the higher molecular with MH being nC25~ nC27, CPI> 1 and with remarkable odd-even dominance.They are of terrigenous plant origin. The second one belongs to lower carbon range with MH being nC17 ~nC20, CPI> 1 and with indistinct odd-even dominance. Therefore they are contributed by marine biological inputs. The contribution of land origin is larger than that of marine source. Pr/Ph is lower than 1 in the investigated area, which indicates the depositional environment of reducing reaction with lower oxygen. The result of factor analysis has good agreement with composition characteristics of n-alkanes in the sediment.

  3. A simulation study on the adsorption properties of linear alkanes on closed nanotube bundles

    NARCIS (Netherlands)

    J.J. Cannon; T.J.H. Vlugt; D. Dubbeldam; S. Maruyama; J. Shiomi

    2012-01-01

    Adsorption onto carbon nanotube bundles may find use in various applications such as gas pre-concentration and separation, and as a result it is of great interest to study the adsorption properties of such bundles. The adsorption of linear alkanes, with their systematic variation through chain lengt

  4. Surface tension of cavities and Tolman’s length in n-alkanes. A positron study

    International Nuclear Information System (INIS)

    Highlights: ► Surface tension in cavities produced by Ps in alkanes is larger than in flat surface. ► Absolute value of Tolman’s length rises with temperature. ► Ortho-Ps lifetime near the melting point is identical for all liquid alkanes. ► No change of ortho-Ps lifetime at the transition liquid–rotator phase for n > 24. - Abstract: Positron annihilation lifetime spectra were measured in n-alkanes. From the lifetime of ortho-positronium (o-Ps) one can determine the surface tension and Tolman’s length for the cavity produced by positronium in the liquid. This tension is found increased by factor of 1.4 ÷ 1.7 comparing to that of flat surface. The Tolman’s length is temperature dependent; in n-nonadecane it rises from about 0.06 nm at melting point to 0.08 nm at the temperature 100 K higher. Near the melting point the value of surface tension of Ps cavities is practically identical for all alkanes under study, i.e. from heptane C7H16 to pentacontane C50H102

  5. A QSPR STUDY OF NORMAL BOILING POINT OF ORGANIC COMPOUNDS (ALIPHATIC ALKANES) USING MOLECULAR DESCRIPTORS

    OpenAIRE

    B. Souyei; M. Korichi

    2013-01-01

    A quantitative structure–property relationship (QSPR) study is carried out to develop correlations that relate the molecular structures of organic compounds (Aliphatic Alkanes) to their normal boiling point (NBP) and two correlations were proposed for constitutionals and connectivity indices Models. The correlations are simple in application with good accuracy, which provide an easy, direct and relatively accurate way to calculate NBP. Such calculation gives us a model that gives results in r...

  6. A comparative study of n-alkane biomarker and pollen records: an example from southern China

    Institute of Scientific and Technical Information of China (English)

    ZHENG YanHong; ZHOU WeiJian; XIE ShuCheng; YU XueFeng

    2009-01-01

    We report the results of a comparative study of n-alkane biomarkers and pollens in lacustrine and peat deposits at Dingnan, Jiangxi Province in southern China, and discuss the likely causes for the discrepancy in the interpretations of the n-alkane biomarker and pollen records in terms of climate and vegetation change. The results show that past changes in climate and vegetation revealed by the n-alkane record are not always consistent with the pollen assemblage record in the whole section.Biomarkers do not permit direct identification of the plant family and/or genus and mainly record compositions of local plant remains, while pollens mainly reflect the regional vegetation change. Biomarkers and pollen records complement each other, providing a better picture of local and regional environments. Furthermore, biomarkers are more sensitive than pollen to climatic and vegetational change. Several climatic events are clearly identified by the n-alkane biomarker proxies, such as C31/(C27+C29+C31) ratio and can be correlated to the North Atlantic Heinrich event, B/A, YD and two dry-cool events during the early Holocene such as the periods of 9850 to 9585 cal a B.P. and 8590 to 7920 cal a B.P. These events are consistent with those found in the surrounding regions, suggesting that the regional climate was coupled with global-scale abrupt climatic events. Our results suggest that biomarker and pollen data can record the more detailed climate and vegetation information, thus improving the resolution and precision of vegetation and climate reconstruction.

  7. Molecular Dynamic Studies on Langmuir Monolayers of Stearic Acid

    Institute of Scientific and Technical Information of China (English)

    KONG Chui-peng; ZHANG Hong-xing; ZHAO Zeng-xia; ZHENG Qing-chuan

    2013-01-01

    Compression isotherm for stearic acid was obtained by means of molecular dynamic simulation and compared to experimentally measured values for the Langmuir monolayers.Compared to the previous simulation,the present simulation has provided a method to reproduce the compression of the monolayer.The result is consistent with other experimental results.By analyzing the alkyl tails,the configuration of stearic acid molecules during the compression process was studied and a uniform monolayer was obtained after compression.Stearic acid molecules were observed to form fine organized monolayer from completely random structure.Hexatic order of the arrangement has been identified for the distribution of stearic acid molecules in the monolayer.At the end of the compression,the stearic acid molecules were tightly packed in the gap of two other molecules.At last,the hydrogen bonds in the system were analyzed.The main hydrogen bonds were from stearic acid-water interaction and their intensities constantly decreased with the decreased of surface area per molecule.The weak hydrogen bond interaction between stearic acid molecules may be the reason of easy collapse.

  8. A sum-frequency generation spectroscopic study of the Gibbs analysis paradox: monolayer or sub-monolayer adsorption?

    Science.gov (United States)

    Shahir, Afshin Asadzadeh; Nguyen, Khoi Tan; Nguyen, Anh V

    2016-03-23

    The Gibbs adsorption isotherm (GAI) has been considered as the foundation of surfactant adsorption studies for over a century; however, its application in determining the limiting surface excess has recently been intensively discussed, with contradictory experimental evidence either supporting or refuting the theory. The available arguments are based on monolayer adsorption models. In this paper, we experimentally and intellectually propose and validate the contribution of sub-monolayer adsorption to the GAI paradox. We utilize a powerful intrinsically surface-sensitive technique, vibrational sum-frequency generation spectroscopy (SFG), complementing with conventional tensiometric measurements to address these controversies both quantitatively and qualitatively. Our SFG results revealed that the precipitous decrease in surface tension directly corresponds to surface occupancy by adsorbates. In addition, the Gibbs analysis was successfully applied to the soluble monolayer of a surface-active alcohol to full saturation. However, the full saturation of the topmost monolayer does not necessarily mean that the surface adsorption was completed because the adsorption was observed to continuously occur in the sub-monolayer region soon after the topmost monolayer became saturated. Nonetheless, the Gibbs isotherm failed to account for the excess of alcohol adsorbed in this sub-monolayer region. This new concept of surface excess must therefore be treated thermodynamically. PMID:26661072

  9. Study of Some Alkanes Thermodynamic Parameters Using New Liquid Crystals Containing Sulfur as Stationary Phases

    Directory of Open Access Journals (Sweden)

    Mebrouk Djedid

    2015-06-01

    Full Text Available Most of the synthesized compounds which have liquid crystalline character in their composition comprise aromatic molecules. Furthermore there are few jobs that replace this type of molecules by inhomogeneous molecules that have LC character. We will replace the aromatic rings by units of 1,3,4-oxadiazole and study the effects of these new components of the transition temperatures and the Thermodynamic characteristics of n- alkanes in these two LC's phases. have been investigated by inverse gas chromatography. The transition temperatures obtained by GC are in good agreement with those found by DSC. The results are interpreted in terms of parameters “b” and related thermodynamic quantities

  10. A QSPR STUDY OF NORMAL BOILING POINT OF ORGANIC COMPOUNDS (ALIPHATIC ALKANES USING MOLECULAR DESCRIPTORS

    Directory of Open Access Journals (Sweden)

    B. Souyei

    2013-12-01

    Full Text Available A quantitative structure–property relationship (QSPR study is carried out to develop correlations that relate the molecular structures of organic compounds (Aliphatic Alkanes to their normal boiling point (NBP and two correlations were proposed for constitutionals and connectivity indices Models. The correlations are simple in application with good accuracy, which provide an easy, direct and relatively accurate way to calculate NBP. Such calculation gives us a model that gives results in remarkable correlations with the descriptors of blokes constitutionals (CON, and connectivity indices (CI (R2 = 0.950, δ = 0.766 (R2 = 0.969, δ = 0.782 respectively.

  11. Studies on the Physical Properties of Alkanes Using Edge-adjacency Information Topological Index

    Institute of Scientific and Technical Information of China (English)

    Cai Hua NI; Xian Yu ZENG; He HUANG

    2005-01-01

    Edge-adjacency index and information topological index for 82 molecules of alkanes have been constructed and calculated. The topological indices were used to correlate with seven physical properties of the alkanes. Some empirical equations were obtained through regression.The regression and calculation results show a good agreement of the topological indices and the properties.

  12. Studies of the structure and properties of organic monolayers, multilayers and superlattices

    International Nuclear Information System (INIS)

    Organic monolayers and multilayers are both scientifically fascinating and technologically promising; they are, however, both complex systems and relatively inaccessible to experimental probes. In this progress report, we describe our x-ray diffraction studies, which have given us substantial new information about the structures and phase transitions in monolayers on the surface of water; our use of these monolayers as a unique probe of the dynamics of wetting and spreading; and our studies of monolayer mechanical properties using a simple but effective technique available to anyone using the Wilhelmy method to measure surface tension. 20 refs., 11 figs

  13. A molecular dynamics study of nanofracture in monolayer boron nitride

    International Nuclear Information System (INIS)

    In this paper, we use molecular dynamics (MD) modeling to study the fracture properties of monolayer hexagonal boron nitride (h-BN) under mixed mode I and II loading. We investigate the impact of crack edge chirality, crack tip configuration and loading phase angle on the crack propagation path and critical stress intensity factors. The MD results predict that under all the loading phase angles cracks prefer to propagate along a zigzag direction and the critical stress intensity factors of zigzag cracks are higher than those of armchair cracks. Under mixed mode loading, the h-BN sheets can undergo out-of-plane deformations due to the buckling induced by compressive stresses. The out-of-plane deformations can be significant when mode II loading is dominant. An excessive amount of out-of-plane deformation can induce buckling cracks. Depending on the loading phase angle and crack configurations, buckling cracks can nucleate before or after the propagation of the original cracks

  14. Quantifying Dimer and Trimer Formation of Tri-n-butyl Phosphates in Different Alkane Diluents: FTIR Study.

    Science.gov (United States)

    Vo, Quynh N; Unangst, Jaclynn L; Nguyen, Hung D; Nilsson, Mikael

    2016-07-21

    Tri-n-butyl phosphate (TBP), a representative of neutral organophosphorous metal-ion-extracting reagents, is an important ligand used in solvent extraction processes for the recovery of uranium and plutonium from spent nuclear fuel, as well as other non-nuclear applications. Ligand-ligand and organic solvent-ligand interactions play an important role in these processes. The self-association behavior of TBP in various alkane diluents of different chain lengths (8, 12, and 16 carbons) and a branched alkane (iso-octane) was investigated by Fourier transform infrared spectroscopic measurements. By careful deconvolution of the spectra into multiple peaks, our results indicate that TBP self-associates to form not only dimers, as previous studies showed, but also trimers in the practical concentration range. Using a mathematical fitting procedure, the dimerization and trimerization constants were determined. As expected, these equilibrium constants are dependent on the solvent used. As the alkane chain for linear hydrocarbon solvents becomes longer, dimerization decreases whereas trimerization increases. For the more branched hydrocarbon, we observe a significantly higher dimerization constant. These effects are most likely due to the intermolecular van der Waals interactions between the butyl tails of each TBP molecule and the diluent hydrocarbon chain as all solvents in this study are relatively nonpolar. PMID:27399338

  15. Study of Liquid Alkanes Production from Biomass-Derived Carbohydrates by Aldol-Condensation and Hydrogenation Processes

    Directory of Open Access Journals (Sweden)

    Navadol Laosiripojana

    2010-10-01

    Full Text Available This research aims to synthesis liquid alkanes from biomass-derived hydroxyl methyl furfural (HMF and furfural by aldol-condensation and hydrogenation processes over several catalysts i.e. TiO2, TiO2-ZrO2, Pd/Al2O3 and Pd/CeO2. It was found that the catalysts make significant impact on the selectivity and yield of alkanes product. It is noted that Pd/Al2O3 provided the highest alkane yield and selectivity. The aldol-condensation and hydrogenation of HMF over Pd/Al2O3 provide high C12 selectivity whereas the aldol-condensation and hydrogenation of furfural over Pd/Al2O3 provide high C8 selectivity. The effects of reaction temperature, reaction pressure and reaction time were then studied. The effect of inlet furfural to acetone molar ratio was also determined. It was also found that the optimized conditions to maximize the yield of alkane production from the aldol-condensation/hydrogenation of HMF and furfural are (i at 53oC and 24 hr for aldol-condenstation of HMF, (ii 80oC and 24 hr for aldol-condenstation of furfural, and (iii 120oC for 6 hr with HMF to acetone molar ratio of 3:1 and furfural to acetone molar ratio of 4:1 in the presence of Pd/Al2O3 (calcined at 500oC for hydrogenation reaction.

  16. Semifluorinated Alkane Eye Drops for Treatment of Dry Eye Disease—A Prospective, Multicenter Noninterventional Study

    Science.gov (United States)

    Scherer, Dieter; Krösser, Sonja; Beckert, Michael; Cursiefen, Claus; Kaercher, Thomas

    2015-01-01

    Abstract Purpose: Evaporation of the tear film is heavily discussed as one core reason for dry eye disease (DED). Subsequently, new artificial tear products are developed that specifically target this pathomechanism. Perfluorohexyloctane (F6H8, NovaTears®) from the family of semifluorinated alkanes is a novel substance that has been approved as a medical device, as a nonblurring wetting agent for the ocular surface. Methods: Thirty patients with hyperevaporative dry eye received F6H8 during a prospective, multicenter, observational 6-week study. Patients were advised to apply 1 drop 4 times daily in both eyes. Parameters assessed included best corrected visual acuity, intraocular pressure, Schirmer I test, tear fluid, tear film breakup time (TFBUT), corneal staining, meibum secretion, and Ocular Surface Disease Index (OSDI©). Results: From the 30 patients recruited, 25 completed the trial per protocol. Four patients discontinued F6H8 and 1 patient did not present for follow-up. F6H8 treatment led to significant reduction of corneal staining and significant increase of Schirmer I and TFBUT. In addition, OSDI score dropped significantly from a mean of 55 (±23.0) to 34 (±22.4). Visual acuity and ocular pressure did not change. Conclusions: This prospective observational study shows significant beneficial effects in patients suffering from evaporative DED, using F6H8 in all the relevant parameters tested. The decrease of the OSDI by a mean of 21 points was particularly remarkable and clearly exceeds minimal, clinical important differences for mild or moderate and severe disease. Overall, F6H8 (NovaTears) seems to be safe and effective in treating mild to moderate hyperevaporative DED. PMID:26296040

  17. Theoretical and experimental study of the vibrational excitations in ethane monolayers adsorbed on graphite (0001) surfaces

    DEFF Research Database (Denmark)

    Hansen, Flemming Yssing; Taub, H.

    1987-01-01

    The collective vibrational excitations of two different crystalline monolayer phases of ethane (C2H6) adsorbed on the graphite (0001) surface have been investigated theoretically and experimentally. The monolayer phases studied are the commensurate 7/8 ×4 structure in which the ethane molecules lie...

  18. Structural and Kinetic Studies of Novel Cytochrome P450 Small-Alkane Hydroxylases

    Energy Technology Data Exchange (ETDEWEB)

    Arnold, Frances H.

    2012-02-27

    The goals of this project are to investigate (1) the kinetics and stabilities of engineered cytochrome P450 (P450) small alkane hydroxylases and their evolutionary intermediates, (2) the structural basis for catalytic proficiency on small alkanes of these engineered P450s, and (3) the changes in redox control resulting from protein engineering. To reach these goals, we have established new methods for determining the kinetics and stabilities of multicomponent P450s such as CYP153A6. Using these, we were able to determine that CYP153A6 is proficient for hydroxylation of alkanes as small as ethane, an activity that has never been observed previously in any natural P450. To elucidate the structures of the engineered P450s, we obtained x-ray diffraction data for two variants in the P450PMO (propane monooxygenase) lineage and a preliminary structure for the most evolved variant. This structure shows changes in the substrate binding regions of the enzyme and a reduction in active site volume that are consistent with the observed changes in substrate specificity from fatty acids in the native enzyme to small alkanes in P450PMO. We also constructed semi-rational designed libraries mutating only residues in the enzyme active site that in one round of mutagenesis and screening produced variants that achieved nearly half of the activity of the most evolved enzymes of the P450PMO lineage. Finally, we found that changes in redox properties of the laboratory-evolved P450 alkane hydroxylases did not reflect the improvement in their electron transfer efficiency. The heme redox potential remained constant throughout evolution, while activity increased and coupling efficiency improved from 10% to 90%. The lack of correlation between heme redox potential and enzyme activity and coupling efficiency led us to search for other enzyme properties that could be better predictors for activity towards small alkanes, specifically methane. We investigated the oxidation potential of the radical

  19. A Novel Topological Index for the Studies on Structure-Properties of Alkanes

    Institute of Scientific and Technical Information of China (English)

    2000-01-01

    A novel topological index derived from eccentric connectivity index has been proposed. The new topological index and eccentric connectivity index were correlated with eight physical properties such as the boiling point, critical temperature, critical pressure, critical volume, evaporation heat, density, heat capaci- ty, surface tension, and three thermodynamic properties such as standard enthalpy, standard entropy and standard formation free energy of alkanes. A series of empiric equations for calculating the properties were obtained. Correlation coefficients of nine properties were more than 0. 99 . Regression analysis and calcula- tion results indicated that the topological indices were well correlated with the physico-chemical properties of alkanes, and the novel topological index was far superior to eccentric connectivity index in the correlation.

  20. Electrochemical Studies of Glutathione Monolayer Assembled on A Polycrystalline Gold Electrode

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    The glutathione (GSH) monolayer and complex monolayer of GSH-metallic ion on polycrys-talline gold electrode were studied by using K3Fe(CN)6 as the redox probe. As for the GSH monolayer, itwas found that the metallic ions could open the ion-gate in the monolayer dramatically in the order La3+>Pb2+>> Ba2+> Ca2+ whereas Zn2+ ion closed the ion-gate. The complexes of GSH-metallic ions were ca-pable of self-assembling the different kind of monolayer. All the differences were related to the structuralconfiguration of the anchored GSH molecule, which changed with the different metallic ions or pH.

  1. Monte Carlo study of electron transport in monolayer silicene

    Science.gov (United States)

    Borowik, Piotr; Thobel, Jean-Luc; Adamowicz, Leszek

    2016-11-01

    Electron mobility and diffusion coefficients in monolayer silicene are calculated by Monte Carlo simulations using simplified band structure with linear energy bands. Results demonstrate reasonable agreement with the full-band Monte Carlo method in low applied electric field conditions. Negative differential resistivity is observed and an explanation of the origin of this effect is proposed. Electron mobility and diffusion coefficients are studied in low applied electric field conditions. We demonstrate that a comparison of these parameter values can provide a good check that the calculation is correct. Low-field mobility in silicene exhibits {T}-3 temperature dependence for nondegenerate electron gas conditions and {T}-1 for higher electron concentrations, when degenerate conditions are imposed. It is demonstrated that to explain the relation between mobility and temperature in nondegenerate electron gas the linearity of the band structure has to be taken into account. It is also found that electron-electron scattering only slightly modifies low-field electron mobility in degenerate electron gas conditions.

  2. Study of the ionization of alkane-electron scavenger reactant mixtures irradiated by 60Co gamma rays

    International Nuclear Information System (INIS)

    This study deals with ionization of alkane-electron scavenger reactant mixtures, irradiated by 60Co γ-rays. It is shown that the extrapolated free-ion yields (extrapolated yield method) decrease with the reactant concentration. On the basis of ONSAGER model and theoretical treatment of MOZUMDER, the cross sections of epithermal electron attachment in hexane, cyclohexane, 2,2-dimethylbutane, cyclopentane, 2,2,4-trimethylpentane for CCl4, C7F14, C6H5Br, C6H5Cl, C6F14, (C6H5)2 are determined. A comparison between gas-phase and liquid-phase cross sections is established

  3. Exploring Ag(111) Substrate for Epitaxially Growing Monolayer Stanene: A First-Principles Study

    Science.gov (United States)

    Gao, Junfeng; Zhang, Gang; Zhang, Yong-Wei

    2016-07-01

    Stanene, a two-dimensional topological insulator composed of Sn atoms in a hexagonal lattice, is a promising contender to Si in nanoelectronics. Currently it is still a significant challenge to achieve large-area, high-quality monolayer stanene. We explore the potential of Ag(111) surface as an ideal substrate for the epitaxial growth of monolayer stanene. Using first-principles calculations, we study the stability of the structure of stanene in different epitaxial relations with respect to Ag(111) surface, and also the diffusion behavior of Sn adatom on Ag(111) surface. Our study reveals that: (1) the hexagonal structure of stanene monolayer is well reserved on Ag(111) surface; (2) the height of epitaxial stanene monolayer is comparable to the step height of the substrate, enabling the growth to cross the surface step and achieve a large-area stanene; (3) the perfect lattice structure of free-standing stanene can be achieved once the epitaxial stanene monolayer is detached from Ag(111) surface; and finally (4) the diffusion barrier of Sn adatom on Ag(111) surface is found to be only 0.041 eV, allowing the epitaxial growth of stanene monolayer even at low temperatures. Our above revelations strongly suggest that Ag(111) surface is an ideal candidate for growing large-area, high-quality monolayer stanene.

  4. Interactions of gas molecules with monolayer MoSe2: A first principle study

    Science.gov (United States)

    Sharma, Munish; Jamdagni, Pooja; Kumar, Ashok; Ahluwalia, P. K.

    2016-05-01

    We present a first principle study of interaction of toxic gas molecules (NO, NO2 and SO2) with monolayer MoSe2. The predicted order of sensitivity of gas molecule is NO2 > SO2 > NO. Adsorbed molecules strongly influence the electronic behaviour of monolayer MoSe2 by inducing impurity levels in the vicinity of Fermi energy. NO and SO2 is found to induce p-type doping effect while semiconductor to metallic transitions occur on NO2 adsorption. Our findings may guide the experimentalist for fabricating sensor devices based on MoSe2 monolayer.

  5. Atomic force microscopy studies of domain structures in phase-separated monolayers

    Science.gov (United States)

    Xiao, Shou-Jun; Wu, Hai-Ming; Yang, Xiao-Min; Wei, Yu; Tai, Zi-Hou; Sun, Xing-Zhong

    1994-10-01

    Domain structures were studied with atomic force microscopy (AFM) in binary phase-separated monolayer films composed of 5, 10, 15-triphenyl-20-(4-dl-α-phenylalanylamindo) phenyl porphyrin (TPPP) and one of a series of fatty acids which are arachidic acid (AA), palmitic acid (PA), and lauric acid (LA). The liquid-condensed (LC) domain structures of AA and PA were observed in their corresponding mixed monolayers. However, instead of the fatty acid domain, a liquid-expanded (LE) domain structure of TPPP appears in the mixed monolayer of LA/TPPP.

  6. Nanorheology of Liquid Alkanes

    Energy Technology Data Exchange (ETDEWEB)

    Gupta, S.A., Cochran, H.D., Cummings, P.T. [Tennessee Univ., Knoxville, TN (United States). Dept. of Chemical Engineering], [Oak Ridge National Lab., TN (United States)

    1997-09-01

    We report molecular dynamics simulations of liquid alkanes, squalane and tetracosane, confined between moving walls to which butane chains are tethered, effectively screening the details of the wall. As in an experiment, heat is removed by thermostatting the tethered molecules. Results obtained at high strain rates, typical of practical applications, suggest little or no difference between the bulk rheology and confined flow, and the occurrence of a high degree of slip at the wall-fluid interface at the conditions studied. At relatively low velocities and high densities, tetracosane shows the formation of fully-extended chains at certain wall spacings.

  7. Electrochemical Impedance Study of Schiff Base by Means of Self-assembled Monolayer

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    In this work, the self-assembled monolayer of Schiff base was first investigated using electrochemical impedance spectroscopy (ELS). The complexation of Cu2+ with the Schiff base was also detected with EIS method. The approximate linear relationship between Cu2+ and the reaction resistance (Rr) was observed. All the results suggest that the electrochemical property of Schiff base could be studied conveniently by means of forming self-assembled monolayer.

  8. First-principles study of the magnetism of Ni-doped MoS2 monolayer

    Science.gov (United States)

    Luo, Min; Hao Shen, Yu; Hao Chu, Jun

    2016-09-01

    The magnetic properties of Ni-doped monolayer MoS2 are investigated using the density function theory. The results show that two Ni-doped systems of the nearest-neighbor configuration are ferromagnetic. The p-d hybridization between the Ni dopant and its neighboring S atoms results in the splitting of energy levels near the Fermi energy. These results suggest the p-d hybridization mechanism for the magnetism of the Ni-doped MoS2 monolayer. The magnetic moment disappears with increasing Ni-Ni distance. Our studies predict the nearest two-Ni-doped MoS2 monolayers to be candidates for thin dilute magnetic semiconductors. Moreover, the formation energy calculations indicate that it would be easier to incorporate Ni atoms into a S-rich MoS2 monolayer in the experiment.

  9. Molecular dynamics studies of the melting of butane and hexane monolayers adsorbed on the basal-plane surface of graphite

    DEFF Research Database (Denmark)

    Hansen, Flemming Yssing; Newton, J. C.; Taub, H.

    1993-01-01

    The effect of molecular steric properties on the melting of quasi-two-dimensional solids is investigated by comparing results of molecular dynamics simulations of the melting of butane and hexane monolayers adsorbed on the basal-plane surface of graphite. These molecules differ only in their length......, being members of the n-alkane series [CH3(CH2)n−2CH3] where n=4 for butane and n=6 for hexane. The simulations employ a skeletal model, which does not include the hydrogen atoms explicitly, to represent the intermolecular and molecule–substrate interactions. Nearest-neighbor intramolecular bonds...... are fixed in length, but the molecular flexibility is preserved by allowing the bend and dihedral torsion angles to vary. The simulations show a qualitatively different melting behavior for the butane and hexane monolayers consistent with neutron and x-ray scattering experiments. The melting of the low...

  10. Structural study of monolayer cobalt phthalocyanine adsorbed on graphite

    CERN Document Server

    Scheffler, M; Baumann, D; Schlegel, R; Hänke, T; Toader, M; Büchner, B; Hietschold, M; Hess, C

    2014-01-01

    We present microscopic investigations on the two-dimensional arrangement of cobalt phthalocyanine molecules on a graphite (HOPG) substrate in the low coverage regime. The initial growth and ordering of molecular layers is revealed in high resolution scanning tunneling microscopy (STM). On low coverages single molecules orient mostly along one of the substrate lattice directions, while they form chains at slightly higher coverage. Structures with two different unit cells can be found from the first monolayer on. A theoretical model based on potential energy calculations is presented, which relates the two phases to the driving ordering forces.

  11. Comparative Study on Single-Molecule Junctions of Alkane- and Benzene-Based Molecules with Carboxylic Acid/Aldehyde as the Anchoring Groups

    Science.gov (United States)

    Chen, Fang; Peng, Lin-Lu; Hong, Ze-Wen; Mao, Jin-Chuan; Zheng, Ju-Fang; Shao, Yong; Niu, Zhen-Jiang; Zhou, Xiao-Shun

    2016-08-01

    We have measured the alkane and benzene-based molecules with aldehyde and carboxylic acid as anchoring groups by using the electrochemical jump-to-contact scanning tunneling microscopy break junction (ECSTM-BJ) approach. The results show that molecule with benzene backbone has better peak shape and intensity than those with alkane backbone. Typically, high junction formation probability for same anchoring group (aldehyde and carboxylic acid) with benzene backbone is found, which contributes to the stronger attractive interaction between Cu and molecules with benzene backbone. The present work shows the import role of backbone in junction, which can guide the design molecule to form effective junction for studying molecular electronics.

  12. Carbon Isotopes of Alkanes in Hydrothermal Abiotic Organic Synthesis Processes at High Temperatures and Pressures: An Experimental Study

    Science.gov (United States)

    Fu, Qi; Socki, Richard A.; Niles, Paul B.

    2010-01-01

    Observation of methane in the Martian atmosphere has been reported by different detection techniques [1-4]. With more evidence showing extensive water-rock interaction in Martian history [5-7], abiotic formation by Fischer-Tropsch Type (FTT) synthesis during serpentization reactions may be one possible process responsible for methane generation on Mars [8, 9]. While the experimental studies performed to date leave little doubt that chemical reactions exist for the abiotic synthesis of organic compounds by mineral surface-catalyzed reactions [10-12], little is known about the reaction pathways by which CO2 and/or CO are reduced under hydrothermal conditions. Carbon and hydrogen isotope measurements of alkanes have been used as an effective tool to constrain the origin and reaction pathways of hydrocarbon formation. Alkanes generated by thermal breakdown of high molecular weight organic compounds have carbon and hydrogen isotopic signatures completely distinct from those formed abiotically [13-15]. Recent experimental studies, however, showed that different abiogenic hydrocarbon formation processes (e.g., polymerization vs. depolymerization) may have different carbon and hydrogen isotopic patterns [16]. Results from previous experiments studying decomposition of higher molecular weight organic compounds (lignite) also suggested that pressure could be a crucial factor affecting fractionation of carbon isotopes [17]. Under high pressure conditions, no experimental data are available describing fractionation of carbon isotope during mineral catalyzed FTT synthesis. Thus, hydrothermal experiments present an excellent opportunity to provide the requisite carbon isotope data. Such data can also be used to identify reaction pathways of abiotic organic synthesis under experimental conditions.

  13. Efficient Hydrogenolysis of Alkanes at Low Temperature and Pressure Using Tantalum Hydride on MCM-41, and a Quantum Chemical Study

    KAUST Repository

    Polshettiwar, Vivek

    2012-02-10

    Hydrogenolysis of hydrocarbons is of considerable technological importance for applications such as the hydroprocessing of petrochemical feedstocks to generate high-value and useful chemicals and fuels. We studied the catalytic activity of tantalum hydride supported on MCM-41 for the hydrogenolysis of alkanes at low temperature and low atmospheric pressure in a dynamic reactor. The reactions proceed with good turnover numbers, and the catalyst could be reused for several times, which makes the overall catalytic process sustainable. We derived the plausible mechanism by using DFT calculations and identified the preferred pathways by the analysis of potential energy surface. Our results and the proposed reaction mechanism demonstrate the viability of the "catalyst-by-design" approach. © 2012 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  14. Phase separation in the organic solid state: simultaneous Synchrotron SAXS / DSC studies of unstable n-alkane blends

    International Nuclear Information System (INIS)

    Full text: Blends of normal alkanes form lamellar structures, when quenched from the melt, in which the separation of the individual chains may be controlled by the chain-length difference, molar composition, isotopic substitution and confinement. We have performed simultaneous synchrotron small-angle X-ray scattering and differential scanning calorimetry studies on 2:1 C28H58:C36D74 mixtures as a function of cooling protocol. Their simultaneous collection enables the temperature-dependent nanostructural changes to be correlated with phase transitions. The data are further complemented by small-angle neutron scattering highlighting the separation of the individual chains via isotopic contrast and optical microscopy indicating changes occurring on the macroscopic scale. Copyright (2005) Australian Institute of Physics

  15. Evaporating Drops of Alkane Mixtures

    CERN Document Server

    Gu'ena, G; Poulard, C; Cazabat, Anne-Marie; Gu\\'{e}na, Geoffroy; Poulard, Christophe

    2005-01-01

    Alkane mixtures are model systems where the influence of surface tension gradients during the spreading and the evaporation of wetting drops can be easily studied. The surface tension gradients are mainly induced by concentration gradients, mass diffusion being a stabilising process. Depending on the relative concentration of the mixture, a rich pattern of behaviours is obtained.

  16. Study of Liquid Alkanes Production from Biomass-Derived Carbohydrates by Aldol-Condensation and Hydrogenation Processes

    OpenAIRE

    Navadol Laosiripojana; Verawat Champreda; Wassana Dedsuksophon

    2010-01-01

    This research aims to synthesis liquid alkanes from biomass-derived hydroxyl methyl furfural (HMF) and furfural by aldol-condensation and hydrogenation processes over several catalysts i.e. TiO2, TiO2-ZrO2, Pd/Al2O3 and Pd/CeO2. It was found that the catalysts make significant impact on the selectivity and yield of alkanes product. It is noted that Pd/Al2O3 provided the highest alkane yield and selectivity. The aldol-condensation and hydrogenation of HMF over Pd/Al2O3 provide high C12 selecti...

  17. High-resolution ellipsometric study of an n-alkane film, dotriacontane, adsorbed on a SiO2 surface

    DEFF Research Database (Denmark)

    Volkmann, U.G.; Pino, M.; Altamirano, L.A.;

    2002-01-01

    alkane/SiO2 interfacial region differs qualitatively from that which occurs in the surface freezing effect at the bulk alkane fluid/vapor interface. In that case, there is again a perpendicular film phase adjacent to the air interface but no parallel film phase intervenes between it and the bulk alkane...... present at higher coverages. In addition, we have performed high-resolution ellipsometry and stray-light measurements on dotriacontane films deposited from solution onto highly oriented pyrolytic graphite substrates. After film deposition, these substrates proved to be less stable in air than SiO2....

  18. In situ detection of anaerobic alkane metabolites in subsurface environments

    Directory of Open Access Journals (Sweden)

    Lisa eGieg

    2013-06-01

    Full Text Available Alkanes comprise a substantial fraction of crude oil and refined fuels. As such, they are prevalent within deep subsurface fossil fuel deposits and in shallow subsurface environments such as aquifers that are contaminated with hydrocarbons. These environments are typically anaerobic, and host diverse microbial communities that can potentially use alkanes as substrates. Anaerobic alkane biodegradation has been reported to occur under nitrate-reducing, sulfate-reducing, and methanogenic conditions. Elucidating the pathways of anaerobic alkane metabolism has been of interest in order to understand how microbes can be used to remediate contaminated sites. Alkane activation primarily occurs by addition to fumarate, yielding alkylsuccinates, unique anaerobic metabolites that can be used to indicate in situ anaerobic alkane metabolism. These metabolites have been detected in hydrocarbon-contaminated shallow aquifers, offering strong evidence for intrinsic anaerobic bioremediation. Recently, studies have also revealed that alkylsuccinates are present in oil and coal seam production waters, indicating that anaerobic microbial communities can utilize alkanes in these deeper subsurface environments. In many crude oil reservoirs, the in situ anaerobic metabolism of hydrocarbons such as alkanes may be contibuting to modern-day detrimental effects such as oilfield souring, or may lead to more benefical technologies such as enhanced energy recovery from mature oilfields. In this review, we briefly describe the key metabolic pathways for anaerobic alkane (including n-alkanes, isoalkanes, and cyclic alkanes metabolism and highlight several field reports wherein alkylsuccinates have provided evidence for anaerobic in situ alkane metabolism in shallow and deep subsurface environments.

  19. Spectroscopic studies of large sheets of graphene oxide and reduced graphene oxide monolayers prepared by Langmuir-Blodgett technique

    Energy Technology Data Exchange (ETDEWEB)

    Sutar, D.S. [Central Surface Analytical Facility, Indian Institute of Technology Bombay, Powai, Mumbai 400076 (India); Department of Physics, Indian Institute of Technology Bombay, Powai, Mumbai 400076 (India); Narayanam, Pavan K.; Singh, Gulbagh; Botcha, V. Divakar; Talwar, S.S. [Department of Physics, Indian Institute of Technology Bombay, Powai, Mumbai 400076 (India); Srinivasa, R.S. [Department of Metallurgical Engineering and Materials Science, Indian Institute of Technology Bombay, Powai, Mumbai 400076 (India); Major, S.S., E-mail: syed@iitb.ac.in [Department of Physics, Indian Institute of Technology Bombay, Powai, Mumbai 400076 (India)

    2012-07-01

    Graphene oxide (GO) sheets prepared by chemical exfoliation were spread at the air-water interface and transferred to silicon substrates by Langmuir-Blodgett technique as closely spaced monolayers of 20-40 {mu}m size. Hydrazine exposure followed by annealing in vacuum and argon ambient results in the formation of reduced graphene oxide (RGO) monolayers, without significantly affecting the overall morphology of the sheets. The monolayer character of both GO and RGO sheets was ascertained by atomic force microscopy. X-ray photoelectron spectroscopy supported by Fourier transform infrared spectroscopy revealed that the reduction process results in a significant decrease in oxygen functionalities, accompanied by a substantial decrease in the ratio of non-graphitic to graphitic (sp{sup 2} bonded) carbon in the monolayers from 1.2 to 0.35. Raman spectra of GO and RGO monolayers have shown that during the reduction process, the G-band shifts by 8-12 cm{sup -1} and the ratio of the intensities of D-band to G-band, I(D)/I(G) decreases from 1.3 {+-} 0.3 to 0.8 {+-} 0.2, which is in tune with the smaller non-graphitic carbon content of RGO monolayers. The significant decrease in I(D)/I(G) has been explained by assuming that substantial order is present in precursor GO monolayers as well as RGO monolayers obtained by solid state reduction. - Highlights: Black-Right-Pointing-Pointer Graphene oxide (GO) monolayers were deoxygenated to form reduced GO (RGO). Black-Right-Pointing-Pointer GO monolayers are 20-40 {mu}m in size, which does not change during reduction. Black-Right-Pointing-Pointer Reduction process does not affect the morphological stability of monolayers. Black-Right-Pointing-Pointer RGO monolayers show substantial decrease in non-graphitic carbon content. Black-Right-Pointing-Pointer Raman studies indicate presence of order in both GO and RGO monolayers.

  20. Structural stability study of protein monolayers in air

    Science.gov (United States)

    Pompa, P. P.; Biasco, A.; Cingolani, R.; Rinaldi, R.; Verbeet, M. Ph.; Canters, G. W.

    2004-03-01

    The assessment of the folding and of the structural stability of a protein in air, upon immobilization in the solid state, represents a critical point from both a fundamental point of view and for the development of solid state nanobioelectronics. The recent demonstrations by Rinaldi et al. [R. Rinaldi et al., Adv. Mater. 14, 1453 (2002); Appl. Phys. Lett. 82, 472 (2003); Ann. (N.Y.) Acad. Sci. 1006, 187 (2003)] of protein-based solid state devices and transistors working in air have raised an intriguing question about the behavior of a biomolecule under nonphysiological conditions. The operation principle of the realized devices is based on the physiological electron transfer function of the metalloprotein azurin. This means that azurin should retain its shape and functionality also in the solid state when utilized in air and at room temperature. In this Brief Report, we prove this claim by analyzing the conformational state of the azurin monolayers developed for such devices by means of intrinsic fluorescence spectroscopy. We show that the immobilization of azurins in the solid state under nonliquid conditions, by means of a specific chemisorption process, does not necessarily lead to protein denaturation. This result is of great importance because it opens up interesting perspectives for the development of solid state hybrid nanodevices for electronic applications requiring nonliquid environments.

  1. A molecular dynamics study of the effect of thermal boundary conductance on thermal transport of ideal crystal of n-alkanes with different number of carbon atoms

    Science.gov (United States)

    Rastgarkafshgarkolaei, Rouzbeh; Zeng, Yi; Khodadadi, J. M.

    2016-05-01

    Phase change materials such as n-alkanes that exhibit desirable characteristics such as high latent heat, chemical stability, and negligible supercooling are widely used in thermal energy storage applications. However, n-alkanes have the drawback of low thermal conductivity values. The low thermal conductivity of n-alkanes is linked to formation of randomly oriented nano-domains of molecules in their solid structure that is responsible for excessive phonon scattering at the grain boundaries. Thus, understanding the thermal boundary conductance at the grain boundaries can be crucial for improving the effectiveness of thermal storage systems. The concept of the ideal crystal is proposed in this paper, which describes a simplified model such that all the nano-domains of long-chain n-alkanes are artificially aligned perfectly in one direction. In order to study thermal transport of the ideal crystal of long-chain n-alkanes, four (4) systems (C20H42, C24H50, C26H54, and C30H62) are investigated by the molecular dynamics simulations. Thermal boundary conductance between the layers of ideal crystals is determined using both non-equilibrium molecular dynamics (NEMD) and equilibrium molecular dynamics (EMD) simulations. Both NEMD and EMD simulations exhibit no significant change in thermal conductance with the molecular length. However, the values obtained from the EMD simulations are less than the values from NEMD simulations with the ratio being nearly three (3) in most cases. This difference is due to the nature of EMD simulations where all the phonons are assumed to be in equilibrium at the interface. Thermal conductivity of the n-alkanes in three structures including liquid, solid, and ideal crystal is investigated utilizing NEMD simulations. Our results exhibit a very slight rise in thermal conductivity values as the number of carbon atoms of the chain increases. The key understanding is that thermal transport can be significantly altered by how the molecules and the

  2. Phases of phosphatidyl ethanolamine monolayers studied by synchrotron x-ray scattering

    DEFF Research Database (Denmark)

    Helm, C.A.; Tippmann-Krayer, P.; Möhwald, H.;

    1991-01-01

    For the first time, phospholid monolayers at the air/water interface have been studied by x-ray diffraction and reflection all along the isotherm from the laterally isotropic fluid (the so-called LE phase) to the ordered phases. The model used to analyze the data, and the accuracy of the paramete...

  3. Synthesis of Novel Amphiphilic Azobenzenes and X-ray Scattering Studies of Their Langmuir Monolayers

    DEFF Research Database (Denmark)

    Sørensen, Thomas Just; Kjær, Kristian; Breiby, Dag Werner;

    2008-01-01

    air-water interface, the amphiphilic azobenzenes form noncrystalline but stable Langmuir films that display an unusual reversible monolayer collapse close to 35 mN/m. The structures and phase transitions were studied by X-ray reflectivity (XR) and grazing-incidence X-ray diffraction, both utilizing...

  4. Dynamics of substituted Alkyl monolayers covalently bonded to silicon: A broadband admittance spectroscopy study

    NARCIS (Netherlands)

    Godet, C.; Fadjie-Djomkam, A.B.; Ababou-Girard, S.; Tricot, S.; Turban, P.; Li, Y.; Pujari, S.P.; Scheres, L.M.W.; Zuilhof, H.; Fabre, B.

    2014-01-01

    The relaxation dynamics of surface-bound n-alkyl chains was studied by broadband admittance spectroscopy (10 mHz–10 MHz) measured at low temperature (130–300 K) in the reverse bias regime of rectifying Hg//organic monolayer (OML)–n-doped Si tunnel junctions. To obtain molecular-level information on

  5. Formaldehyde molecule adsorption on the doped monolayer MoS2: A first-principles study

    Science.gov (United States)

    Ma, Dongwei; Ju, Weiwei; Li, Tingxian; Yang, Gui; He, Chaozheng; Ma, Benyuan; Tang, Yanan; Lu, Zhansheng; Yang, Zongxian

    2016-05-01

    Based on first-principles calculations, formaldehyde (H2CO) adsorption on the pristine monolayer MoS2 and that doped with Cl, P, or Si was theoretically studied to explore the potential of the MoS2 sheets as H2CO gas sensors. It is found that under Mo-rich conditions it is viable for Cl to be filled into the S vacancies acting as n-type dopant and for P and Si acting as p-type dopants. The results on the H2CO adsorption on the pristine and the Cl-doped monolayer MoS2 indicate that both are insensitive to H2CO. In contrast, H2CO exhibits strong adsorption on the P or Si-doped monolayer MoS2. And there are large electron transfer from the P or Si-doped monolayer MoS2 to the H2CO and obvious change in the electronic densities of states of both systems induced by the H2CO adsorption. These suggest that P and Si can be appropriate dopants filled into MoS2 sheets for detecting H2CO molecule.

  6. Metathesis of alkanes and related reactions

    KAUST Repository

    Basset, Jean-Marie

    2010-02-16

    (Figure Presented) The transformation of alkanes remains a difficult challenge because of the relative inertness of the C-H and C-C bonds. The rewards for asserting synthetic control over unfunctionalized, saturated hydrocarbons are considerable, however, because converting short alkanes into longer chain analogues is usually a value-adding process. Alkane metathesis is a novel catalytic and direct transformation of two molecules of a given alkane into its lower and higher homologues; moreover, the process proceeds at relatively low temperature (ambient conditions or higher). It was discovered through the use of a silica-supported tantalum hydride, (=SiO)2TaH, a multifunctional catalyst with a single site of action. This reaction completes the story of the metathesis reactions discovered over the past 40 years: olefin metathesis, alkyne metathesis, and ene-yne cyclizations. In this Account, we examine the fundamental mechanistic aspects of alkane metathesis as well as the novel reactions that have been derived from its study. The silica-supported tantalum hydride catalyst was developed as the result of systematic and meticulous studies of the interaction between oxide supports and organometallic complexes, a field of study denoted surface organometallic chemistry (SOMC). A careful examination of this surface-supported tantalum hydride led to the later discovery of aluminasupported tungsten hydride, W(H)3/Al 2O3, which proved to be an even better catalyst for alkane metathesis. Supported tantalum and tungsten hydrides are highly unsaturated, electron-deficient species that are very reactive toward the C-H and C-C bonds of alkanes. They show a great versatility in various other reactions, such as cross-metathesis between methane and alkanes, cross-metathesis between toluene and ethane, or even methane nonoxidative coupling. Moreover, tungsten hydride exhibits a specific ability in the transformation of isobutane into 2,3-dimethylbutane as well as in the metathesis of

  7. Lithium halide monolayers: Structural, electronic and optical properties by first principles study

    Science.gov (United States)

    Safari, Mandana; Maskaneh, Pegah; Moghadam, Atousa Dashti; Jalilian, Jaafar

    2016-09-01

    Using first principle study, we investigate the structural, electronic and optical properties of lithium halide monolayers (LiF, LiCl, LiBr). In contrast to graphene and other graphene-like structures that form hexagonal rings in plane, these compounds can form and stabilize in cubic shape interestingly. The type of band structure in these insulators is identified as indirect type and ionic nature of their bonds are illustrated as well. The optical properties demonstrate extremely transparent feature for them as a result of wide band gap in the visible range; also their electron transitions are indicated for achieving a better vision on the absorption mechanism in these kinds of monolayers.

  8. Possible doping strategies for MoS 2 monolayers: An ab initio study

    KAUST Repository

    Dolui, Kapildeb

    2013-08-14

    Density functional theory is used to systematically study the electronic properties of doped MoS2 monolayers, where the dopants are incorporated both via S/Mo substitution or as adsorbates. Among the possible substitutional dopants at the Mo site, Nb is identified as suitable p-type dopant, while Re is the donor with the lowest activation energy. When dopants are simply adsorbed on a monolayer we find that alkali metals shift the Fermi energy into the MoS2 conduction band, making the system n type. Finally, the adsorption of charged molecules is considered, mimicking an ionic liquid environment. We find that molecules adsorption can lead to both n- and p-type conductivity, depending on the charge polarity of the adsorbed species. © 2013 American Physical Society.

  9. Wedge energy bands of monolayer black phosphorus: a first-principles study

    Science.gov (United States)

    Park, Minwoo; Bae, Hyeonhu; Lee, Seunghan; Yang, Li; Lee, Hoonkyung

    2016-08-01

    On the basis of first-principles calculations, we present intriguing electronic properties of halogen-striped functionalized monolayer black phosphorus. The halogen-striped monolayer black phosphorus is found to have a wedge energy band with the energy-momentum relation of E\\propto {{p}y} when the stripe–stripe distance is smaller than ~40 Å. Our tight-binding study shows that the wedge energy band occurs when 2-atom basis 1D lattices are periodically repeated aligned with each other in a 2D lattice. We also discuss the possible applications of this wedge energy band in electron supercollimation with high mobility or severely anisotropic electronic transport, which can be used for the development of optics-like nano-electronics.

  10. Wedge energy bands of monolayer black phosphorus: a first-principles study.

    Science.gov (United States)

    Park, Minwoo; Bae, Hyeonhu; Lee, Seunghan; Yang, Li; Lee, Hoonkyung

    2016-08-01

    On the basis of first-principles calculations, we present intriguing electronic properties of halogen-striped functionalized monolayer black phosphorus. The halogen-striped monolayer black phosphorus is found to have a wedge energy band with the energy-momentum relation of [Formula: see text] when the stripe-stripe distance is smaller than ~40 Å. Our tight-binding study shows that the wedge energy band occurs when 2-atom basis 1D lattices are periodically repeated aligned with each other in a 2D lattice. We also discuss the possible applications of this wedge energy band in electron supercollimation with high mobility or severely anisotropic electronic transport, which can be used for the development of optics-like nano-electronics. PMID:27299467

  11. Catalytic activation of alkanes on noble metal-loaded zeolites : experimental studies and simulation of the dehydroalkylation of toluene with ethane

    OpenAIRE

    Rezai, Alireza

    2012-01-01

    With the recent progress in chemical reaction engineering and highly active, multi-functional catalysts, the activation of relatively inert alkanes may be achieved. The direct use of short-chain alkanes, especially methane and ethane, as basic chemical feedstocks represents an attractive alternative to alkenes. Significant reserves of alkanes are found in nature in the form of wet natural gas, whereas alkenes have to be synthesized via other chemical reactions. The activation of alkanes can b...

  12. Alkane dimers interaction

    DEFF Research Database (Denmark)

    Ferrighi, Lara; Madsen, Georg Kent Hellerup; Hammer, Bjørk

    2010-01-01

    The interaction energies of a series of n-alkane dimers, from methane to decane, have been investigated with Density Functional Theory (DFT), using the MGGA-M06-L density functional. The results are compared both to the available wavefunction-based values as well as to dispersion corrected DFT...

  13. Contribution to study of the thermodynamics properties of mixtures containing 2-methoxy-2-methylpropane, alkanol, alkane

    International Nuclear Information System (INIS)

    Graphical abstract: - Highlights: • Experimental enthalpies for the mixtures MTBE + pentanol + hexane and pentanol + hexane were measured. • No experimental ternary values were found in the currently available literature. • Excess molar enthalpies are positive over the whole range of composition. • The ternary contribution is also positive with the exception of a range located around the rich compositions of 1-pentanol. - Abstract: Excess molar enthalpies for the ternary system {x1 2-methoxy-2-methylpropane (MTBE) + x2 1-pentanol + (1 − x1 − x2) hexane} and the involved binary mixture {x 1-pentanol + (1 − x) hexane}, have been measured at T = 298.15 K and atmospheric pressure over the whole composition range. We are not aware of the existence of previous experimental measurement of the excess enthalpy for the ternary mixture under study in the literature currently available. Values of the excess molar enthalpies were measured using a Calvet microcalorimeter. The results were fitted by means of different variable degree polynomials. The ternary contribution to the excess enthalpy was correlated with the equation due to Verdes et al. (2004), and the equation proposed by Myers–Scott (1963) was used to fit the experimental binary mixture measured in this work. Smooth representations of the results are presented and used to construct constant excess molar enthalpy contours on Roozeboom diagrams. The excess molar enthalpies for the binary and ternary system are positive over the whole range of composition. The binary mixture {x 1-pentanol + (1 − x) hexane} is asymmetric, with its maximum displace toward a high mole fraction of decane. The ternary contribution is also positive with the exception of a range located around the rich compositions of 1-pentanol, and the representation is asymmetric. Additionally, the group contribution model of the UNIFAC model, in the versions of Larsen et al. (1987) [18] and Gmehling et al. (1993) [19] was used to estimate

  14. Self Assembly of Mixed Monolayers of Mercaptoundecylferrocene and Undecanethiol studied by STM

    International Nuclear Information System (INIS)

    Mixed monolayers of mercaptoundecylferrocene and undecanethiol were deposited from solution by coadsorption and by a two-step insertion method, using the alkanethiol monolayer as insulating matrix. The resulting layers were characterized by UHV-STM, showing molecular resolution. For insertion-processed samples, a mesh-like surface structure of ferrocenes was observed, due to the preferential incorporation of molecules along domain boundaries and defect sites of the alkanethiol monolayer. For monolayers in the intermediate coverage regime, a crystalline phase was observed

  15. Electronic and magnetic properties of dopant atoms in SnSe monolayer: a first-principles study

    CERN Document Server

    Wang, Qingxia; Fu, Xiaonan; Qiao, Chong; Xia, Congxin; Jia, Yu

    2015-01-01

    SnSe monolayer with orthorhombic Pnma GeS structure is an important two-dimensional (2D) indirect band gap material at room temperature. Based on first-principles density functional theory calculations, we present systematic studies on the electronic and magnetic properties of X (X = Ga, In, As, Sb) atoms doped SnSe monolayer. The calculated electronic structures show that Ga-doped system maintains semiconducting property while In-doped SnSe monolayer is half-metal. The As- and Sb- doped SnSe systems present the characteristics of n-type semiconductor. Moreover, all considered substitutional doping cases induce magnetic ground states with the magnetic moment of 1{\\mu}B. In addition, the calculated formation energies also show that four types of doped systems are thermodynamic stable. These results provide a new route for the potential applications of doped SnSe monolayer in 2D photoelectronic and magnetic semiconductor devices.

  16. Systematic study of aggregation structure and thermal behavior of a series of unique H-shape alkane molecules.

    Science.gov (United States)

    Yamamoto, Hiroko; Tashiro, Kohji; Nemoto, Norio; Motoyama, Yukihiro; Takahashi, Yoshiaki

    2011-08-11

    The H-shape alkanes of various arm lengths have been synthesized successfully through the Grignard reaction. The detailed investigation of these novel compounds may allow us to widen the topological chemistry field furthermore. The molecular form and molecular packing structure in the crystal lattice have been revealed successfully on the basis of X-ray structure analysis as well as the analysis of Raman longitudinal acoustic modes (LAM) sensitive to the alkyl zigzag chain segments. The molecular conformation in the crystal lattice is deformed markedly from the originally imagined H-shape. In the cases of C3HOH to C6HOH, for example, the molecules are packed in a complicated manner and the OH···O hydrogen bonds govern the whole intermolecular interactions mainly. Since the alkyl segmental length is not very long, the conformational change is not very drastic, i.e., the small configurational entropy. Synergic effect of the hydrogen bonds and the small configurational entropy gives the higher melting point as known from the thermal data. On the other hand, in the cases of C10HOH and C12HOH, one of the long alkyl chain arms is found to be bent by 90° so that all of the alky chain segments of planar-zigzag conformation can be packed as closely as possible, and the intermolecular OH···O hydrogen bonds are also formed effectively without any mistake. As a result, the contribution of nonbonded intra- and intermolecular van der Waals interactions between the trans-zigzag alkyl chain segments become major, and the coupling of this enthalpy effect with the larger configurational entropy effect of the molecular shape results in the decrement of the melting point which approaches gradually that of longer n-alkane compound. In this way a sensitive balance between the nonbonded van der Waals interactions, the OH···O hydrogen bonds, as well as the configurational entropy effect gives the characteristic thermal behavior of the H-shape compounds. The thus

  17. Positional order in Langmuir monolayers: An X-ray diffraction study

    DEFF Research Database (Denmark)

    Kaganer, V.M.; Brezesinski, G.; Möhwald, H.;

    1999-01-01

    The structural phase transition from the hexagonal to a distorted-hexagonal (centered rectangular) phase (the LS-S transition) in Langmuir monolayers of octadecanol is studied in a grazing incidence x-ray diffraction experiment. We find algebraic decay of positional correlations, which suggests...... solid-like order in both phases at the distances accessible in the present x-ray diffraction experiment. The transition is accompanied by strong positional disorder, which is evident from the drastic increase of the exponent eta to values eta>2 close to the transition. Remarkably, on approaching...

  18. Towards strain gauges based on a self-assembled nanoparticle monolayer-SAXS study

    International Nuclear Information System (INIS)

    An in situ small-angle x-ray scattering study of the nanoparticle displacement in a self-assembled monolayer as a function of a supporting membrane strain is presented. The average nanoparticle spacing is 6.7 nm in the unstrained state and increases in the applied force direction, following linearly the membrane strain which reaches the maximum value of 11%. The experimental results suggest a continuous mutual shift of the nanoparticles and their gradual separation with the growing stress rather than nanoparticle islands formation. No measurable shift of the nanoparticles was observed in the direction perpendicular to the applied stress.

  19. Insights into rapid climate change: A high resolution, compound-specific n-alkane δD study of the 8.2 ka event (Tenaghi Philippon, Greece)

    Science.gov (United States)

    Schemmel, F.; Niedermeyer, E.; Schwab, V.; Pross, J.; Mulch, A.

    2013-12-01

    Despite being characterized as remarkably stable, the Holocene climate has experienced a number of abrupt, relatively short-term climate changes. Arguably the most prominent climate perturbation, the 8.2 ka event, was caused by the catastrophic drainage of the ice-dammed Laurentide ice-lake into the North Atlantic, leading to a severe weakening of thermohaline circulation, causing a decline in temperature and significant changes in atmospheric circulation in the Northern Hemisphere, especially in the North Atlantic realm and Europe. Being located between the climate systems of the higher and lower latitudes, the Mediterranean region is particularly susceptible to rapid climate change. Available proxy data and climate models provide first-order insight into the impact of the 8.2 ka event in this area but often lack the temporal resolution to supply information about changes in seasonality, hence severely hindering the understanding of rapid climate changes and revealing the need for high resolution terrestrial archives. Here, we present a multi-proxy, high resolution stable isotope study across the 8.2 ka event on a peat core from the classical site of Tenaghi Philippon (NE Greece). We aim to characterize the effects of changing temperature and rainfall patterns by using compound-specific δD values of the long-chain n-alkanes as a proxy for terrestrial (summer) precipitation. We compare changes in hydrogen isotopic composition to the concentration of the long-chain n-alkanes as well as to δ13Cbulk measurements of the organic material and high-resolution palynomorphic data from the same core. Analysis of 35 samples of telmatic peat shows significant decreases in concentration of the long-chain n-alkanes along with strong positive shifts in δD (over 40 ‰ in δDC29) during the 8.2 ka event. The general trend of δD of the n-Alkanes n-C27, n-C29 and n-C31 coincides with changes in δ13Cbulk, and to some degree reflects changes in moisture availability. We attribute

  20. Monolayer ice

    NARCIS (Netherlands)

    Zangi, R; Mark, AE

    2003-01-01

    We report results from molecular dynamics simulations of water under confinement and at ambient conditions that predict a first-order freezing transition from a monolayer of liquid water to a monolayer of ice induced by increasing the distance between the confining parallel plates. Since a slab geom

  1. Sub-monolayers of carbon on alpha-iron facets: an ab-initio study

    CERN Document Server

    Riikonen, S; Nieminen, R M

    2010-01-01

    Motivated by recent in situ studies of carbon nanotube growth from large transition-metal nanoparticles, we study various alpha-iron (ferrite) facets at different carbon concentrations using ab initio methods. The studied (110), (100) and (111) facets show qualitatively different behaviour when carbon concentration changes. In particular, adsorbed carbon atoms repel each other on the (110) facet, resulting in carbon dimer and graphitic material formation. Carbon on the (100) facet forms stable structures at concentrations of about 0.5 monolayer and at 1.0 monolayer this facet becomes unstable due to a frustration of the top layer iron atoms. The stability of the (111) facet is weakly affected by the amount of adsorbed carbon and its stability increases further with respect to the (100) facet with increasing carbon concentration. The exchange of carbon atoms between the surface and sub-surface regions on the (111) facet is easier than on the other facets and the formation of carbon dimers is exothermic. These ...

  2. Perforated monolayers

    Energy Technology Data Exchange (ETDEWEB)

    Regen, S.L.

    1992-12-01

    Goal of this research program is to create ultrathin organic membranes that possess uniform and adjustable pores ( < 7[angstrom] diameter). Such membranes are expected to possess high permeation selectivity (permselectivity) and high permeability, and to provide the basis for energy-efficient methods of molecular separation. Work carried out has demonstrated feasibility of using perforated monolayer''-based composites as molecular sieve membranes. Specifically, composite membranes derived from Langmuir-Blodgett multilayers of the calix[6]arene-based surfactant shown below plus poly[l-(trimethylsilyl)-l-propyne] (PTMSP) were found to exhibit sieving behavior towards He, N[sub 2] and SF[sub 6]. Results of derivative studies that have also been completed are also described in this report.

  3. Topological properties of phosphorene-like monolayer group V semiconductor compounds: a first-principles study

    CERN Document Server

    Yu, Weiyang; Niu, Chun-Yao; Li, Chong; Cho, Jun-Hyung; Jia, Yu

    2015-01-01

    To broaden the scope of layered group V semiconductors, we propose a class of phosphorenelike monolayer group V semiconductor compounds, such as PN, AsP, SbP and BiP with black-phosphorus-like alpha-phase and blue-phosphorus-like beta-phase, respectively. Using first-principles density functional theory calculations, we study yet unrealized structural phases of these compounds. We find the black-phosphorus-like alpha-phase to be almost equally stable as the blue-phosphorus-like beta-phase. alpha-phase compounds display a direct band gap, while beta-phase compounds display an indirect band gap. Both alpha-phase and beta-phase monolayers depends sensitively on the in-layer strain, as is studied with alpha- and beta- AsP and BiP. Further more, We find that alpha-BiP presents an intriguing topological state when gained a compress from -8% to -10%, offering an unprecedented tunability in structural and electronic properties of BiP compound.

  4. Molecular Simulation study of Alkyl Monolayers on Si(III) Surface

    Institute of Scientific and Technical Information of China (English)

    2003-01-01

    The structure of eight-carbon monolayers on the H-terminated Si(III) surface was investigated by molecular simulation method. The best substitution percent 50% for octene or octyne-derived monolayer can be obtained using molecular mechanics calculation. And the densely packed, well-ordered monolayer on Si(III) surface can be shown through energy minimization in the suitable-size simulation cell.

  5. Electronic and vibrational properties of graphene monolayers with iron adatoms: A density functional theory study

    Energy Technology Data Exchange (ETDEWEB)

    Dimakis, Nicholas, E-mail: dimakis@utpa.edu [Department of Physics and Geology, University of Texas-Pan American, Edinburg, TX (United States); Navarro, Nestor E. [Department of Chemistry, University of Texas-Pan American, Edinburg, TX (United States); Velazquez, Julian; Salgado, Andres [Department of Physics and Geology, University of Texas-Pan American, Edinburg, TX (United States)

    2015-04-15

    Highlights: • Periodic density functional calculations were performed on graphene monolayers with and without an iron adatom. • Densities of states, charge transfers, and overlap populations were used to elucidate the effects of weak iron adsorption on graphene compared to CO adsorption on Pt. • Infrared intensities and normal mode analysis verify weak iron adsorption on graphene by studying the shift in prominent vibrational modes and changes in lattice dynamics. - Abstract: Periodic density functional calculations on graphene monolayers with and without an iron adatom have been used to elucidate iron-graphene adsorption and its effects on graphene electronic and vibrational properties. Density-of-states calculations and charge density contour plots reveal charge transfer from the iron s orbitals to the d orbitals, in agreement with past reports. Adsorbed iron atoms covalently bind to the graphene substrate, verified by the strong hybridization of iron d-states with the graphene bands in the energy region just below the Fermi level. This adsorption is weak and compared to the well-analyzed CO adsorption on Pt: It is indicated by its small adsorption energy and the minimal change of the substrate geometry due to the presence of the iron adatoms. Graphene vibrational spectra are analyzed though a systematic variation of the graphene supercell size. The shifts of graphene most prominent infrared active vibrational modes due to iron adsorption are explored using normal mode eigenvectors.

  6. Electronic and vibrational properties of graphene monolayers with iron adatoms: A density functional theory study

    International Nuclear Information System (INIS)

    Highlights: • Periodic density functional calculations were performed on graphene monolayers with and without an iron adatom. • Densities of states, charge transfers, and overlap populations were used to elucidate the effects of weak iron adsorption on graphene compared to CO adsorption on Pt. • Infrared intensities and normal mode analysis verify weak iron adsorption on graphene by studying the shift in prominent vibrational modes and changes in lattice dynamics. - Abstract: Periodic density functional calculations on graphene monolayers with and without an iron adatom have been used to elucidate iron-graphene adsorption and its effects on graphene electronic and vibrational properties. Density-of-states calculations and charge density contour plots reveal charge transfer from the iron s orbitals to the d orbitals, in agreement with past reports. Adsorbed iron atoms covalently bind to the graphene substrate, verified by the strong hybridization of iron d-states with the graphene bands in the energy region just below the Fermi level. This adsorption is weak and compared to the well-analyzed CO adsorption on Pt: It is indicated by its small adsorption energy and the minimal change of the substrate geometry due to the presence of the iron adatoms. Graphene vibrational spectra are analyzed though a systematic variation of the graphene supercell size. The shifts of graphene most prominent infrared active vibrational modes due to iron adsorption are explored using normal mode eigenvectors

  7. First principles kinetic Monte Carlo study on the growth patterns of WSe2 monolayer

    Science.gov (United States)

    Nie, Yifan; Liang, Chaoping; Zhang, Kehao; Zhao, Rui; Eichfeld, Sarah M.; Cha, Pil-Ryung; Colombo, Luigi; Robinson, Joshua A.; Wallace, Robert M.; Cho, Kyeongjae

    2016-06-01

    The control of domain morphology and defect level of synthesized transition metal dichalcogenides (TMDs) is of crucial importance for their device applications. However, current TMDs synthesis by chemical vapor deposition and molecular beam epitaxy is in an early stage of development, where much of the understanding of the process-property relationships is highly empirical. In this work, we use a kinetic Monte Carlo coupled with first principles calculations to study one specific case of the deposition of monolayer WSe2 on graphene, which can be expanded to the entire TMD family. Monolayer WSe2 domains are investigated as a function of incident flux, temperature and precursor ratio. The quality of the grown WSe2 domains is analyzed by the stoichiometry and defect density. A phase diagram of domain morphology is developed in the space of flux and the precursor stoichiometry, in which the triangular compact, fractal and dendritic domains are identified. The phase diagram has inspired a new synthesis strategy for large TMD domains with improved quality.

  8. Radical formation in the [MeReO3]-catalyzed aqueous peroxidative oxidation of alkanes: a theoretical mechanistic study.

    Science.gov (United States)

    Kuznetsov, Maxim L; Pombeiro, Armando J L

    2009-01-01

    Plausible mechanisms of radical formation in the catalytic system [MeReO(3)]/H(2)O(2)/H(2)O-CH(3)CN for the oxidation of alkanes to alcohols and ketones, via radical pathways, are investigated extensively at the density functional theory level. The most favorable route is based on the monoperoxo complex [MeReO(2)(O(2))(H(2)O)] and includes the formation of an H(2)O(2) adduct, water-assisted H-transfer from H(2)O(2) to the peroxo ligand, and generation of HOO(*). The thus formed reduced Re(VI) complex [MeReO(2)(OOH)(H(2)O)] reacts with H(2)O(2), resulting, upon water-assisted H-transfer and O-OH bond homolysis, in the regeneration of the oxo-Re(VII) catalyst and formation of the HO(*) radical that reacts further with the alkane. Water plays a crucial role by (i) stabilizing transition states for the proton migrations and providing easy intramolecular H-transfers in the absence of any N,O-ligands and (ii) saturating the Re coordination sphere what leads to a decrease of the activation barrier for the formation of HOO(*). The activation energy of the radical formation calculated for [MeReO(3)] (17.7 kcal/mol) is compatible with that determined experimentally [Shul'pin et al. J. Chem. Soc., Perkin Trans. 2 2001, 1351 .] for oxo-V-based catalytic systems (17 +/- 2 kcal/mol), and the overall type of mechanism proposed for such V catalysts is also effective for [MeReO(3)]. PMID:19049432

  9. Hydrogen Bonding to Alkanes: Computational Evidence

    DEFF Research Database (Denmark)

    Hammerum, Steen; Olesen, Solveig Gaarn

    2009-01-01

    The structural, vibrational, and energetic properties of adducts of alkanes and strong cationic proton donors were studied with composite ab initio calculations. Hydrogen bonding in [D-H+ H-alkyl] adducts contributes to a significant degree to the interactions between the two components, which is...

  10. A note on the use of ellipsometry for studying the kinetics of formation of self-assembled monolayers

    Indian Academy of Sciences (India)

    Murali Sastry

    2000-06-01

    Ellipsometry is currently one of the most important techniques for characterization of the deposition and growth mode of ultra thin organic films. However, it is well known that for thicknesses normally encountered in organic monolayer films, as would occur for example in self-assembled monolayers, ellipsometry cannot be used to simultaneously determine the thickness and refractive index of the monolayer film. Current practice is to assume a reasonable value for the film refractive index and calculate an effective ‘ellipsometric thickness’. This communication seeks to show that the alternative approach of assuming a thickness for the monolayer (determined by the length of the molecule) and calculating the effective film refractive index lends itself to easier and more meaningful physical interpretation. The Lorentz–Lorenz formula is then used to transform the effective refractive index into a surface coverage and hence to an effective mass coverage. The methodology advanced is applied to the kinetics of formation of a self-assembled monolayer of a well-studied molecule, octadecanethiol on Au.

  11. Electrochemical Study of Biotin-Modified Self-Assembled Monolayers: Recommendations for Robust Preparation

    Directory of Open Access Journals (Sweden)

    Richard J.C. Brown

    2006-01-01

    Full Text Available The development of the underpinning methodology for the production of robust, well-formed, and densely packed biotin-HPDP functionalised gold surfaces, the crucial first step in immobilising bimolecules on surfaces, is described. Self-assembled monolayers (SAMs with biotin end-groups were prepared on polycrystalline gold surfaces according to a published method. The layers formed were studied using cyclic voltammetry to determine the composition of the layer and its quality. Crystal impedance spectroscopy was also applied as a complimentary indicator of the composition of the layer.For the first time, the effect of assembly time on the properties of the layer was studied along with the composition of the layer and the ability of the precursor molecule to self-assemble by oxidative addition.

  12. Transepithelial transport of aliphatic carboxylic acids studied in Madin Darby canine kidney (MDCK) cell monolayers.

    Science.gov (United States)

    Cho, M J; Adson, A; Kezdy, F J

    1990-04-01

    Transport of 14C-labeled acetic, propionic (PA), butyric, valeric, heptanoic (HA), and octanoic (OA) acids across the Madin Darby canine kidney (MDCK) epithelial cell monolayer grown on a porous polycarbonate membrane was studied in Hanks' balanced salt solution (HBSS) at 37 degrees C in both apical-to-basolateral and basolateral-to-apical directions. At micromolar concentrations of solutes, metabolic decomposition was significant as evidenced by [14C]CO2 production during the OA transport. The apparent permeability (Pe) indicates that as lipophilicity increases, diffusion across the "unstirred" boundary layer becomes rate limiting. In support of this notion, transport of OA and HA was enhanced by agitation, showed an activation energy of 3.7 kcal/mol for OA, and resulted in identical Pe values for both transport directions. Analysis of Pe changes with varying alkyl chain length resulted in a delta G of -0.68 +/- 0.09 kcal/mol for -CH2-group transfer from an aqueous phase to the MDCK cells. When the intercellular tight junctions were opened by the divalent chelator EGTA in Ca2+/Mg2(+)-free HBSS, transport of the fluid-phase marker Lucifer yellow greatly increased because of paracellular leakage. PA transport also showed a significant increase, but OA transport was independent of EGTA. Although albumin also undergoes paracellular transport in the presence of EGTA and OA binds strongly to albumin, OA transport in EGTA solution was unchanged by albumin. These observations indicate that transmembrane transport is the major mechanism for lipophilic substances. The present study, together with earlier work on the transport of polar substances, shows that the MDCK cell monolayer is an excellent model of the transepithelial transport barrier.

  13. Kinetic studies on the interactions between glycolipid biosurfactant assembled monolayers and various classes of immunoglobulins using surface plasmon resonance.

    Science.gov (United States)

    Ito, Seya; Imura, Tomohiro; Fukuoka, Tokuma; Morita, Tomotake; Sakai, Hideki; Abe, Masahiko; Kitamoto, Dai

    2007-08-01

    Kinetic studies on the interactions between self-assembled monolayers of mannosylerythritol lipids (MELs), which are glycolipid biosurfactants abundantly produced by microorganisms, and various classes of immunoglobulins including human IgG, IgA, and IgM were performed using surface plasmon resonance (SPR). The effect of the MEL structure on the binding behavior of HIgG was examined. Assembled monolayers of MEL-A having two acetyl groups on the headgroup gave a high affinity (K(d)=1.7x10(-6)M) toward HIgG, while those of MEL-B or MEL-C having only one acetyl group at C-6' or C-4' position gave little affinity. Our kinetic analysis revealed that the binding manner of HIgG, HIgA (K(d)=2.4x10(-7)M), and HIgM (K(d)=2.2x10(-7)M) to the assembled monolayers of MEL-A is not the monovalent mode but the bivalent mode, and both the first and second rate association constants (k(a1), k(a2)) increase with an increase in the number of antibody binding sites, while those for dissociation (k(d1), k(d2)) changed little. Moreover, we succeeded in directly observing great amounts of HIgG, HIgA, and HIgM bound to MEL-A monolayers using atomic force microscopy (AFM). Finally, we found that MEL-A assembled monolayer binds toward various IgG derived from mouse, pig, rabbit, horse, goat, rat, and bovine as well as human IgG (HIgG), and the only exception was sheep IgG. These results clearly demonstrate that MEL-A assembled monolayers would be useful as noble affinity ligand system for various immunoglobulins. PMID:17428643

  14. Computational Study of Metal Contacts to Monolayer Transition-Metal Dichalcogenide Semiconductors

    Science.gov (United States)

    Kang, Jiahao; Liu, Wei; Sarkar, Deblina; Jena, Debdeep; Banerjee, Kaustav

    2014-07-01

    Among various 2D materials, monolayer transition-metal dichalcogenide (mTMD) semiconductors with intrinsic band gaps (1-2 eV) are considered promising candidates for channel materials in next-generation transistors. Low-resistance metal contacts to mTMDs are crucial because currently they limit mTMD device performances. Hence, a comprehensive understanding of the atomistic nature of metal contacts to these 2D crystals is a fundamental challenge, which is not adequately addressed at present. In this paper, we report a systematic study of metal-mTMD contacts with different geometries (top contacts and edge contacts) by ab initio density-functional theory calculations, integrated with Mulliken population analysis and a semiempirical van der Waals dispersion potential model (which is critical for 2D materials and not well treated before). Particularly, In, Ti, Au, and Pd, contacts to monolayer MoS2 and WSe2 as well as Mo-MoS2 and W-WSe2 contacts are evaluated and categorized, based on their tunnel barriers, Schottky barriers, and orbital overlaps. Moreover, going beyond Schottky theory, new physics in such contact interfaces is revealed, such as the metallization of mTMDs and abnormal Fermi level pinning. Among the top contacts to MoS2, Ti and Mo show great potential to form favorable top contacts, which are both n-type contacts, while for top contacts to WSe2, W or Pd exhibits the most advantages as an n- or p-type contact, respectively. Moreover, we find that edge contacts can be highly advantageous compared to top contacts in terms of electron injection efficiency. Our formalism and the results provide guidelines that would be invaluable for designing novel 2D semiconductor devices.

  15. Revisiting the Kinetics and Thermodynamics of the Low-Temperature Oxidation Pathways of Alkanes: A Case Study of the Three Pentane Isomers

    KAUST Repository

    Bugler, John

    2015-07-16

    © 2015 American Chemical Society. This paper describes our developing understanding of low-temperature oxidation kinetics. We have investigated the ignition of the three pentane isomers in a rapid compression machine over a wide range of temperatures and pressures, including conditions of negative temperature coefficient behavior. The pentane isomers are small alkanes, yet have structures that are complex enough to allow for the application of their kinetic and thermochemical rules to larger molecules. Updates to the thermochemistry of the species important in the low-temperature oxidation of hydrocarbons have been made based on a thorough literature review. An evaluation of recent quantum-chemically derived rate coefficients from the literature pertinent to important low-temperature oxidation reaction classes has been performed, and new rate rules are recommended for these classes. Several reaction classes have also been included to determine their importance with regard to simulation results, and we have found that they should be included when developing future chemical kinetic mechanisms. A comparison of the model simulations with pressure-time histories from experiments in a rapid compression machine shows very good agreement for both ignition delay time and pressure rise for both the first- and second-stage ignition events. We show that revisions to both the thermochemistry and the kinetics are required in order to replicate experiments well. A broader validation of the models with ignition delay times from shock tubes and a rapid compression machine is presented in an accompanying paper. The results of this study enhance our understanding of the combustion of straight- and branched-chained alkanes.

  16. Long-chain alkane production by the yeast Saccharomyces cerevisiae.

    Science.gov (United States)

    Buijs, Nicolaas A; Zhou, Yongjin J; Siewers, Verena; Nielsen, Jens

    2015-06-01

    In the past decade industrial-scale production of renewable transportation biofuels has been developed as an alternative to fossil fuels, with ethanol as the most prominent biofuel and yeast as the production organism of choice. However, ethanol is a less efficient substitute fuel for heavy-duty and maritime transportation as well as aviation due to its low energy density. Therefore, new types of biofuels, such as alkanes, are being developed that can be used as drop-in fuels and can substitute gasoline, diesel, and kerosene. Here, we describe for the first time the heterologous biosynthesis of long-chain alkanes by the yeast Saccharomyces cerevisiae. We show that elimination of the hexadecenal dehydrogenase Hfd1 and expression of a redox system are essential for alkane biosynthesis in yeast. Deletion of HFD1 together with expression of an alkane biosynthesis pathway resulted in the production of the alkanes tridecane, pentadecane, and heptadecane. Our study provides a proof of principle for producing long-chain alkanes in the industrial workhorse S. cerevisiae, which was so far limited to bacteria. We anticipate that these findings will be a key factor for further yeast engineering to enable industrial production of alkane based drop-in biofuels, which can allow the biofuel industry to diversify beyond bioethanol.

  17. Distribution and sources of n-alkanes in surface sediments of Taihu Lake, China

    Directory of Open Access Journals (Sweden)

    Yu Yunlong

    2016-03-01

    Full Text Available The last study on n-alkanes in surface sediments of Taihu Lake was in 2000, only 13 surface sediment samples were analysed, in order to have a comprehensive and up-to-date understanding of n-alkanes in the surface sediments of Taihu Lake, 41 surface sediment samples were analyzed by GC-MS. C10 to C37 were detected, the total concentrations of n-alkanes ranged from 2109 ng g−1 to 9096 ng g−1 (dry weight. There was strong odd carbon predominance in long chain n-alkanes and even carbon predominance in short chain n-alkanes. When this finding was combined with the analysis results of wax n-alkanes (WaxCn, carbon preference index (CPI, unresolved complex mixture (UCM, hopanes and steranes, it was considered that the long chain n-alkanes were mainly from terrigenous higher plants, and that the short chain n-alkanes mainly originated from bacteria and algae in the lake, compared with previous studies, there were no obvious anthropogenic petrogenic inputs. Terrestrial and aquatic hydrocarbons ratio (TAR and C21−/C25+ indicated that terrigenous input was higher than aquatic sources and the nearshore n-alkanes were mainly from land-derived sources. Moreover, the distribution of short chain n-alkanes presented a relatively uniform pattern, while the long chain n-alkanes presented a trend that concentrations dropped from nearshore places to the middle of lake.

  18. Cholesterol Depletion from a Ceramide/Cholesterol Mixed Monolayer: A Brewster Angle Microscope Study

    KAUST Repository

    Mandal, Pritam

    2016-06-01

    Cholesterol is crucial to the mechanical properties of cell membranes that are important to cells’ behavior. Its depletion from the cell membranes could be dramatic. Among cyclodextrins (CDs), methyl beta cyclodextrin (MβCD) is the most efficient to deplete cholesterol (Chol) from biomembranes. Here, we focus on the depletion of cholesterol from a C16 ceramide/cholesterol (C16-Cer/Chol) mixed monolayer using MβCD. While the removal of cholesterol by MβCD depends on the cholesterol concentration in most mixed lipid monolayers, it does not depend very much on the concentration of cholesterol in C16-Cer/Chol monolayers. The surface pressure decay during depletion were described by a stretched exponential that suggested that the cholesterol molecules are unable to diffuse laterally and behave like static traps for the MβCD molecules. Cholesterol depletion causes morphology changes of domains but these disrupted monolayers domains seem to reform even when cholesterol level was low.

  19. Studies of Self-assembled Monolayers Formed by Imidazoline on Iron Surface by SEM and SECM

    Institute of Scientific and Technical Information of China (English)

    Xiu Yu LIU; Shen Hao CHEN; Shuai MIAO; Su Xiang WU; Li Xia SHEN; Yuan Xing CAI; Hong Yan ZHAI

    2006-01-01

    The self-assembled monolayers (SAMs) of imidazoline (IM) on the iron surface were characterized by scanning electron microscope (SEM) and scanning electrochemical microscopy(SECM). The results showed that SAMs were an effective inhibition film for iron.

  20. Alkane metathesis by tandem alkane-dehydrogenation-olefin-metathesis catalysis and related chemistry.

    Science.gov (United States)

    Haibach, Michael C; Kundu, Sabuj; Brookhart, Maurice; Goldman, Alan S

    2012-06-19

    stable solid metal oxides as the olefin-metathesis catalysts. Both the pincer complexes and the alkylidene complexes have been supported on alumina via adsorption through basic para-substituents. This process does not significantly affect catalyst activity, and in some cases it increases both the catalyst lifetime and the compatibility of the co-catalysts. These molecular catalysts are the first systems that effect alkane metathesis with molecular-weight selectivity, particularly for the conversion of C(n)n-alkanes to C(2n-2)n-alkanes plus ethane. This molecular-weight selectivity offers a critical advantage over the few previously reported alkane metathesis systems. We have studied the factors that determine molecular-weight selectivity in depth, including the isomerization of the olefinic intermediates and the regioselectivity of the pincer-iridium catalyst for dehydrogenation at the terminal position of the n-alkane. Our continuing work centers on the development of co-catalysts with improved interoperability, particularly olefin-metathesis catalysts that are more robust at high temperature and dehydrogenation catalysts that are more active at low temperature. We are also designing dehydrogenation catalysts based on metals other than iridium. Our ongoing mechanistic studies are focused on the apparently complex combination of factors that determine molecular-weight selectivity. PMID:22584036

  1. Studies on the interactions between parabens and lipid membrane components in monolayers at the air/aqueous solution interface.

    Science.gov (United States)

    Flasiński, Michał; Gawryś, Maciej; Broniatowski, Marcin; Wydro, Paweł

    2016-04-01

    The interactions between parabens (PBs) and lipid components of mammalian and bacterial cell membranes were investigated in model systems of Langmuir monolayers. Me-, Et-, Pr- and Bu-paraben studied in this paper are frequently applied as cosmetics and food preservatives, since they possess broad antimicrobial activity. The mode of PB action is connected with their incorporation into the membrane of bacterial organisms, however; it is not known what is the role of the respective lipid species in this mechanism. This problem is crucial to understand the differences in paraben activity toward individual microorganisms and to shed the light onto the problem of PB cytotoxicity reported in studies on mammalian cells. In this paper, the mentioned aspects were investigated with application of the Langmuir monolayer technique complemented with BAM and GIXD. Our experiments revealed that the influence of PBs depends on their chemical structure, solution concentration and on the class of lipid. The strongest modification of the monolayer characteristics, leading to its collapse at low surface pressure, occurred in the presence of BuPB, having the largest chain. PBs interact preferentially with the monolayers possessing low degree of condensation, whereas for LC state, the effect was weaker and observed only as modification of the 2D unit cells. In the model systems, PBs interact with phospholipids characteristic for mammalian membranes (phosphatidylcholine) stronger than with bacterial (phosphatidylglycerol and cardiolipin). This strong influence of parabens on the model systems composed of animal lipids may explain cytotoxic activity of these preservatives. PMID:26777770

  2. Anisotropic mechanical properties and Stone-Wales defects in graphene monolayer: A theoretical study

    Energy Technology Data Exchange (ETDEWEB)

    Fan, B.B. [School of Materials Science and Engineering, Zhengzhou University, Henan 450001 (China); Yang, X.B. [Department of Physics, South China University of Technology, Guangzhou 510640 (China); Zhang, R., E-mail: zhangray@zzu.edu.c [School of Materials Science and Engineering, Zhengzhou University, Henan 450001 (China); Zhengzhou Institute of Aeronautical Industry Management, Henan 450046 (China)

    2010-06-14

    We investigate the mechanical properties of graphene monolayer via the density functional theoretical (DFT) method. We find that the strain energies are anisotropic for the graphene under large strain. We attribute the anisotropic feature to the anisotropic sp{sup 2} hybridization in the hexagonal lattice. We further identify that the formation energies of Stone-Wales (SW) defects in the graphene monolayer are determined by the defect concentration and also the direction of applied tensile strain, correlating with the anisotropic feature.

  3. X-ray diffraction and molecular-dynamics studies: Structural analysis of phases in diglyceride monolayers

    DEFF Research Database (Denmark)

    Peters, Günther H.J.; Larsen, Niels Bent; Bjørnholm, T.;

    1998-01-01

    We report a detailed structural analysis of the phases of 1,2-sn-dipalmitoylglycerol Langmuir monolayers at room temperature. Pressure-induced transitions have been investigated by combination of molecular-dynamics simulations and grazing-incidence x-ray diffraction (XRD). The diglyceride film un...... indicate that in the simulated monolayer the finite size with periodic boundary conditions imposes a higher degree of order....

  4. Wetting transitions of simple liquid films adsorbed on selfassembled monolayer substrates: an ellipsometric study

    Science.gov (United States)

    Batchelder, D. N.; Cheng, Y. L.; Evans, S. D.; Henderson, J. R.

    We report on an ellipsometric experimental study designed to explore the relevance of the wetting phase diagram predicted by liquid state physics of basic models, to the wide class of simple organic liquid films that adsorb from saturated vapour onto planar substrates at room temperature. The wetting properties are explored by measuring adsorption isotherms in the approach to saturation, in particular, for adsorption of n -hexane on a variety of specially constructed substrates (self-assembled monolayers) spanning a wide range of surface energy, and by carrying out the microscopic equivalent of contact angle experiments at saturation. We locate a wetting transition, which in our case is continuous, and then study its properties in detail. The general prediction of the wetting phase diagram, that wetting transitions should be ubiquitous in nature and readily located via control over the substrate field, is supported by our data, but the quantitative nature of the thick film adsorption regime is not in agreement with Lifshitz theory. This conclusion supports the work of a variety of earlier related studies, but contrasts with recent results for adsorption onto the surface of water. In addition, the correlation length determined from our complete wetting adsorption isotherms is mesoscopic, suggesting that equilibrium statistical mechanics of simple models of inhomogeneous fluids cannot explain the data.

  5. Slow Diffusive Motions in a Monolayer of Tetracosane Molecules Adsorbed on Graphite

    DEFF Research Database (Denmark)

    Taub, H.; Hansen, Flemming Yssing; Criswell, L.;

    2004-01-01

    Monolayers of intermediate-length alkane molecules such as tetracosane (n-C24H50 or C24) serve as prototypes for studying the interfacial dynamics of more complex polymers, including bilayer lipid membranes. Using high-resolution quasielastic neutron scattering (QNS) and exfoliated graphite...... to a temperature of similar to230 K, we observe the QNS energy width to be dispersionless, consistent with molecular dynamics simulations showing rotational motion of the molecules about their long axis. At 260 K, the QNS energy width begins to increase with wave vector transfer, suggesting onset of nonuniaxial...... rotational motion and bounded translational motion. We continue to observe QNS up to the monolayer melting temperature at similar to340 K where our simulations indicate that the only motion slow enough to be visible within our energy window results from the creation of gauche defects in the molecules....

  6. A comparison study of oxygen reduction on the supported Pt, Pd, Au monolayer on WC(0001)

    Science.gov (United States)

    Zhang, Xilin; Lu, Zhansheng; Yang, Zongxian

    2016-07-01

    Using the first principles methods, the geometric and electronic structures of the metal monolayers supported on WC(0001) surfaces (MML/WC(0001) (M = Pt, Pd, and Au)) and their catalytic activity toward the oxygen reduction reaction (ORR) were comparatively studied. Both the kinetics and the density of states results demonstrated that the direct dissociation of O2 on all three MML/WC(0001) surfaces are almost impossible. Yet the barriers of the formation and dissociation of OOH on AuML/WC(0001) are much smaller than those on the PtML/WC(0001) and the PdML/WC(0001) surfaces, implying that the AuML/WC(0001) exhibits the highest catalytic activity for ORR via a combination of 2e- hydrogenation of O2 and 4e- dissociation of OOH. The rate-limiting step barrier of 0.83 eV for the hydrogenation of OH forming H2O is also comparable to that on the traditional Pt-based catalysts. The deactivation mechanism of PtML/WC(0001) and the performance of PdML/WC(0001) for ORR were identified. The present study is conductive to designing new efficient catalyst without using of the precious Pt for efficiently promoting ORR.

  7. Anomalous Lithium Adsorption Propensity of Monolayer Carbonaceous Materials: A Density Functional Study

    Indian Academy of Sciences (India)

    SWATI PANIGRAHI; DEIVASIGAMANI UMADEVI; G NARAHARI SASTRY

    2016-10-01

    Interaction between lithium and carbonaceous materials has gained a lot of importance in lithium battery industry as an important source of energy and storage. The size, dimension, curvature and chirality of the carbonaceous materials are found to be very important factors in controlling the sequential binding oflithium. The propensity of lithium binding to the monolayer carbonaceous materials has been studied using Density functional theory (DFT). Structural and energetical parameters of the complexes have been analyzed through interaction energy, sequential energy, Mulliken population analysis and spin density distribution. Spindensity of odd Li doped systems reveals the preferences for addition of further lithium atoms on the surface. Upon analyzing the interaction energy in armchair carbon nanotubes (A-CNTs) and zigzag carbon nanotubes (Z-CNTs), it has been observed that external and internal surfaces of CNTs have contrasting binding preferences for sequential addition of Li atoms. Internal surface is found to be more feasible site for lithium adsorption than the external surface. This current study provides fundamental understanding of the mechanism of lithium adsorption in lithium battery.

  8. Stability and Electronic Properties of Hydrogenated MoS2 Monolayer: A First-Principles Study.

    Science.gov (United States)

    Zhang, Weibin; Zhang, Zhijun; Yang, Woochul

    2015-10-01

    First-principles total energy studies are used to investigate the stability of hydrogenated MoS2 monolayer (MoS2-Hx) (x = 1-8), which is a compound with different numbers of H atoms adsorbed on the MoS2 surface. Energetically, the S-top side of the MoS2 is found to be the most favorable for H-adsorption. H2S and graphene are well-known to be stable, and MoS2-Hx is predicted to be even more stable because its binding energy is lower than that of H2S and its formation energy and adsorption energy are lower than those of graphene. The analysis of the electronic density distribution and the orbital hybrid also shows that MoS2-Hx forms stable structures. In addition, the influence of the number of the adsorbed H-atoms in the MoS2-Hx on the electronic structure of the compound is also investigated. The MoS2-Hx band structure exhibits a dispersion and the MoS2-Hx band gap gradually decreases from 1.72 eV to 0 eV as the number of adsorbed H atoms increases. The corresponding work function increases as a result of the strengthening of the dipole moment formed between the H atoms that are adsorbed and the hydrogenated MoS2.

  9. Theoretical study of polyiodide formation and stability on monolayer and bilayer graphene.

    Science.gov (United States)

    Tristant, Damien; Puech, Pascal; Gerber, Iann C

    2015-11-28

    The presence of polyiodide complexes have been reported several times when carbon-based materials were doped by iodine molecules, but their formation mechanism remains unclear. By using first-principles calculations that include nonlocal correlation effects by means of a van der Waals density functional approach, we propose that the formation of triiodide (I3(-)) and pentaiodide (I5(-)) is due to a large density of iodine molecules (I2) in interaction with a carbonaceous substrate. As soon as the concentration of surface iodine reaches a threshold value of 12.5% for a graphene monolayer and 6.25% for a bilayer, these complexes spontaneously appear. The corresponding structural and energetic aspects, electronic structures and vibrational frequencies support this statement. An upshift of the Dirac point from the Fermi level with values of 0.45 and 0.52 eV is observed for adsorbed complexes on graphene and intercalated complexes between two layers, respectively. For doped-graphene, it corresponds to a graphene hole density of around 1.1 × 10(13) cm(-2), in quantitative agreement with experiments. Additionally, we have studied the thermal stability at room temperature of these adsorbed ions on graphene by means of ab initio molecular dynamics, which also shows successful p-doping with polyiodide complexes.

  10. Theoretical study of polyiodide formation and stability on monolayer and bilayer graphene.

    Science.gov (United States)

    Tristant, Damien; Puech, Pascal; Gerber, Iann C

    2015-11-28

    The presence of polyiodide complexes have been reported several times when carbon-based materials were doped by iodine molecules, but their formation mechanism remains unclear. By using first-principles calculations that include nonlocal correlation effects by means of a van der Waals density functional approach, we propose that the formation of triiodide (I3(-)) and pentaiodide (I5(-)) is due to a large density of iodine molecules (I2) in interaction with a carbonaceous substrate. As soon as the concentration of surface iodine reaches a threshold value of 12.5% for a graphene monolayer and 6.25% for a bilayer, these complexes spontaneously appear. The corresponding structural and energetic aspects, electronic structures and vibrational frequencies support this statement. An upshift of the Dirac point from the Fermi level with values of 0.45 and 0.52 eV is observed for adsorbed complexes on graphene and intercalated complexes between two layers, respectively. For doped-graphene, it corresponds to a graphene hole density of around 1.1 × 10(13) cm(-2), in quantitative agreement with experiments. Additionally, we have studied the thermal stability at room temperature of these adsorbed ions on graphene by means of ab initio molecular dynamics, which also shows successful p-doping with polyiodide complexes. PMID:26497888

  11. Ordered water monolayer on ionic model substrates studied by molecular dynamics simulations

    International Nuclear Information System (INIS)

    The molecular behaviors of interfacial water molecules at the solid/liquid interface are of a fundamental significance in a diverse set of technical and scientific contexts, thus have drawn extensive attentions. On certain surfaces, the water monolayer may exhibit an ordered feature, which may result in the novel wetting phenomenon. In this article, based on the molecular dynamics simulations, we make a detailed structure analysis of the ordered water monolayer on ionic model surface with graphene-like hexagonal lattices under various charges and unit cell sizes. We carefully analyze the water density profiles and potential of mean force, which are the origin of the special hexagonal ordered water structures near the solid surface. The number of hydrogen bonds of the ordered water monolayer near the solid surface is carefully investigated. (authors)

  12. Pharmacokinetic study between a bilayer matrix fentalyl patch and a monolayer matrix fentanyl patch: single dose administration in healthy volunteers*

    OpenAIRE

    Zecca, Ernesto; Manzoni, Andrea; Centurioni, Fabio; Farina, Alberto; Bonizzoni, Erminio; Seiler, Dan; Perrone, Tania; Caraceni, Augusto

    2015-01-01

    Aims Transdermal fentanyl is a well established treatment for cancer pain. The aim of the present study is to assess the relative bioavailability of fentanyl from two different transdermal systems by evaluating plasma drug concentrations after single administration of Fentalgon® (test), a novel bilayer matrix type patch, and Durogesic SMAT (reference), a monolayer matrix type patch. In the Fentalgon patch the upper 6% fentanyl reservoir layer maintains a stable concentration gradient between ...

  13. Discrimination of abiogenic and biogenic alkane gases

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    We have combined the analytical data of the carbon isotope distribution pattern, R/Ra and CH4/3He values of abiogenic and biogenic (referring to the thermogenic and bacterial or microbial) alkane gases in China with those of alkane gases from USA, Russia, Germany, Australia and other countries. Four discrimination criteria are derived from this comparative study: 1) Carbon isotopic composition is generally greater than -30‰ for abiogenic methane and less than -30‰ for biogenic methane; 2) Abiogenic alkane gases have a carbon isotopic reversal trend (δ 13C1> δ 13C2> δ 13C3> δ 13C4) with δ 13C1>-30‰ in general; 3) Gases with R/Ra >0.5 and δ 13C11 δ 13C2>0 are of abiogenic origin; 4) Gases (meth- ane) with CH4/3He≤106 are of abiogenic origin, whereas gases with CH4/3He≥1011 are of biogenic origin.

  14. Discrimination of abiogenic and biogenic alkane gases

    Institute of Scientific and Technical Information of China (English)

    DAI JinXing; MI JingKui; LI ZhiSheng; HU AnPing; YANG Chun; ZHOU QingHua; SHUAI YanHua; ZHANG Ying; MA ChengHua; ZOU CaiNeng; ZHANG ShuiChang; LI Jian; NI YunYan; HU GuoYi; LUO Xia; TAO ShiZhen; ZHU GuangYou

    2008-01-01

    We have combined the analytical data of the carbon isotope distribution pattern, R/Ra and cliche values of abiogenic and biogenic (referring to the therrnogenic and bacterial or microbial) alkane gases in China with those of alkane gases from USA, Russia, Germany, Australia and other countries. Four discrimination criteria are derived from this comparative study: 1) Carbon isotopic composition is generally greater than -30‰ for abiogenic methane and less than -30‰ for biogenic methane; 2)Abiogenic alkane gases have a carbon isotopic reversal trend (Δ13c1>Δ13c2>Δ13c3>Δ13c4) with Δ13c1>-30‰ in general; 3) Gases with R/Ra>0.5 and Δ13c1- Δ13c2>0 are of abiogenic origin; 4) Gases (methane) with CH4/3He≤106 are of abiogenic origin, whereas gases with CH4/3He≥1011 are of biogenic origin.

  15. Data reduction and analysis programs for neutron reflection studies of monolayer adsorption at interfaces

    International Nuclear Information System (INIS)

    Data reduction and analysis programs for neutron reflectivity data from monolayer adsorption at interfaces are described. The application of model fitting to the reflectivity data, and the determination of partial structure factors within the kinematic approximation are discussed. Recent data for the adsorption of surfactants at the air-solution interface are used to illustrate the programs described. (author)

  16. Immobilization of rhodium complexes at thiolate monolayers on gold surfaces : Catalytic and structural studies

    NARCIS (Netherlands)

    Belser, T; Stöhr, Meike; Pfaltz, A

    2005-01-01

    Chiral rhodium-diphosphine complexes have been incorporated into self-assembled thiolate monolayers (SAMS) on gold colloids. Catalysts of this type are of interest because they combine properties of homogeneous and heterogeneous systems. In addition, it should be possible to influence the catalytic

  17. Microcomputer interface for computer-controlled enzyme kinetic studies with the monolayer technique

    NARCIS (Netherlands)

    Haas, G. de; Donné-Op den Kelder, G.M.; Wildt, H. van der

    1984-01-01

    Abstract A microcomputer interface for computer-assisted monolayer experiments was developed, tested, and used for analysis of the enzymatic hydrolysis by pancreatic phospholipases A2 (EC 3.1.1.4) of 1,2-didodecanoyl-sn-glycero-3-sulfate monitored under constant surface pressure. The interface descr

  18. An atomic force microcopy study of the mechanical and electricalproperties of monolayer films of molecules with aromatic end groups

    Energy Technology Data Exchange (ETDEWEB)

    Fang, Liang; Park, J.Y.; Ma, H.; Jen, A.K.-Y.; Salmeron, M.

    2007-09-06

    The effect of intermolecular {pi}-{pi} stacking on the electrical and mechanical properties of monolayer films molecules containing aromatic groups was studied using atomic force microscopy. Two types of aromatic molecules, (4-mercaptophenyl) anthrylacetylene (MPAA) and (4-mercaptophenyl)-phenylacetylene (MPPA) were used as model systems with different {pi}-{pi} stacking strength. Monolayer films of these molecules on Au(111) surfaces exhibited conductivities differing by more than one order of magnitude, MPAA being the most conductive and MPPA the least conductive. The response to compressive loads by the AFM tip was also found to be very different for both molecules. In MPAA films distinct molecular conductivity changes are observed upon mechanical perturbation. This effect however was not observed on the MPPA film, where intermolecular {pi}-{pi} interactions are likely weaker.

  19. Solar photothermochemical alkane reverse combustion.

    Science.gov (United States)

    Chanmanee, Wilaiwan; Islam, Mohammad Fakrul; Dennis, Brian H; MacDonnell, Frederick M

    2016-03-01

    A one-step, gas-phase photothermocatalytic process for the synthesis of hydrocarbons, including liquid alkanes, aromatics, and oxygenates, with carbon numbers (Cn) up to C13, from CO2 and water is demonstrated in a flow photoreactor operating at elevated temperatures (180-200 °C) and pressures (1-6 bar) using a 5% cobalt on TiO2 catalyst and under UV irradiation. A parametric study of temperature, pressure, and partial pressure ratio revealed that temperatures in excess of 160 °C are needed to obtain the higher Cn products in quantity and that the product distribution shifts toward higher Cn products with increasing pressure. In the best run so far, over 13% by mass of the products were C5+ hydrocarbons and some of these, i.e., octane, are drop-in replacements for existing liquid hydrocarbons fuels. Dioxygen was detected in yields ranging between 64% and 150%. In principle, this tandem photochemical-thermochemical process, fitted with a photocatalyst better matched to the solar spectrum, could provide a cheap and direct method to produce liquid hydrocarbons from CO2 and water via a solar process which uses concentrated sunlight for both photochemical excitation to generate high-energy intermediates and heat to drive important thermochemical carbon-chain-forming reactions. PMID:26903631

  20. Solar photothermochemical alkane reverse combustion.

    Science.gov (United States)

    Chanmanee, Wilaiwan; Islam, Mohammad Fakrul; Dennis, Brian H; MacDonnell, Frederick M

    2016-03-01

    A one-step, gas-phase photothermocatalytic process for the synthesis of hydrocarbons, including liquid alkanes, aromatics, and oxygenates, with carbon numbers (Cn) up to C13, from CO2 and water is demonstrated in a flow photoreactor operating at elevated temperatures (180-200 °C) and pressures (1-6 bar) using a 5% cobalt on TiO2 catalyst and under UV irradiation. A parametric study of temperature, pressure, and partial pressure ratio revealed that temperatures in excess of 160 °C are needed to obtain the higher Cn products in quantity and that the product distribution shifts toward higher Cn products with increasing pressure. In the best run so far, over 13% by mass of the products were C5+ hydrocarbons and some of these, i.e., octane, are drop-in replacements for existing liquid hydrocarbons fuels. Dioxygen was detected in yields ranging between 64% and 150%. In principle, this tandem photochemical-thermochemical process, fitted with a photocatalyst better matched to the solar spectrum, could provide a cheap and direct method to produce liquid hydrocarbons from CO2 and water via a solar process which uses concentrated sunlight for both photochemical excitation to generate high-energy intermediates and heat to drive important thermochemical carbon-chain-forming reactions.

  1. Microelectrode array in mixed alkanethiol self-assembled monolayers: Electrochemical studies

    International Nuclear Information System (INIS)

    We report an efficient alternative to obtain recessed microelectrodes device on gold electrode surface, in which mixed self-assembled monolayer of long and short carbon alkanethiol chains was used for this purpose. Development of the modified electrodes included the chemical adsorption of 11-mercaptoundecanoic acid and 2-mercaptoethanol solution, as well as their mixtures, on gold surface, resulting in the final mixed self-assembled monolayer configuration. For comparison, the electrochemical performance of self-assembled monolayer of 11-mercaptoundecanoic acid, 3-mercaptopropionic acid, 4-mercapto-1-butanol and 6-mercapto-1-hexanol modified electrodes was also investigated. It was verified that, in the mixed self-assembled monolayer, the 11-mercaptoundecanoic acid acts as a barrier for electron transfer while the short alkanethiol chair is deposited in an island-like shape through which electrons can be freely transferred to ions in solution, allowing electrochemical reactions to occur. The performance of the modified electrodes toward microelectrode behavior was investigated via cyclic voltammetry and electrochemical impedance spectroscopy measurements using [Fe(CN)6]3−/4− redox couple as a probe. In this case, sigmoidal voltammetric responses were obtained, very similar to those observed for microelectrodes. Such behavior reinforces the proposition of electron transfer through the short alkanethiol chain layer and surface blockage by the long chain one. Electrochemical impedance results allowed calculated the mean radius value of each microelectrode disks of 3.8 μm with about 22 μm interval between them. The microelectrode environment provided by the mixed self-assembled monolayer can be conveniently used to provide an efficient catalytic conversion in biosensing applications.

  2. Markedly different adsorption behaviors of gas molecules on defective monolayer MoS2: a first-principles study.

    Science.gov (United States)

    Li, Hongxing; Huang, Min; Cao, Gengyu

    2016-06-01

    Sulfur vacancy (SV) is one of the most typical defects in two-dimensional monolayer MoS2, leading to reactive sites. We presented a systematic study of the adsorption behaviors of gas molecules, CO2, N2, H2O, CO, NH3, NO, O2, H2 and NO2, on monolayer MoS2 with single SV by first-principles calculations. It was found that CO2, N2 and H2O molecules physisorbed at the proximity of single SV. Our adsorption energy calculations and charge transfer analysis showed that the interactions between CO2, N2 and H2O molecules and defective MoS2 are stronger than the cases of CO2, N2 and H2O molecules adsorbed on pristine MoS2, respectively. The defective MoS2 based gas sensors may be more sensitive to CO2, N2 and H2O molecules than pristine MoS2 based ones. CO, NO, O2 and NH3 molecules were found to chemisorb at the S vacancy site and thus modify the electronic properties of defective monolayer MoS2. Magnetism was induced upon adsorption of NO molecules and the defective states induced by S vacancy can be completely removed upon adsorption of O2 molecules, which may provide some helpful information for designing new MoS2 based nanoelectronic devices in future. The H2 and NO2 molecules were found to dissociate at S vacancy. The dissociation of NO2 molecules resulted in O atoms located at the S vacancy site and NO molecules physisorbed on O-doped MoS2. The calculated results showed that NO2 molecules can help heal the S vacancy of the MoS2 monolayer.

  3. Markedly different adsorption behaviors of gas molecules on defective monolayer MoS2: a first-principles study.

    Science.gov (United States)

    Li, Hongxing; Huang, Min; Cao, Gengyu

    2016-06-01

    Sulfur vacancy (SV) is one of the most typical defects in two-dimensional monolayer MoS2, leading to reactive sites. We presented a systematic study of the adsorption behaviors of gas molecules, CO2, N2, H2O, CO, NH3, NO, O2, H2 and NO2, on monolayer MoS2 with single SV by first-principles calculations. It was found that CO2, N2 and H2O molecules physisorbed at the proximity of single SV. Our adsorption energy calculations and charge transfer analysis showed that the interactions between CO2, N2 and H2O molecules and defective MoS2 are stronger than the cases of CO2, N2 and H2O molecules adsorbed on pristine MoS2, respectively. The defective MoS2 based gas sensors may be more sensitive to CO2, N2 and H2O molecules than pristine MoS2 based ones. CO, NO, O2 and NH3 molecules were found to chemisorb at the S vacancy site and thus modify the electronic properties of defective monolayer MoS2. Magnetism was induced upon adsorption of NO molecules and the defective states induced by S vacancy can be completely removed upon adsorption of O2 molecules, which may provide some helpful information for designing new MoS2 based nanoelectronic devices in future. The H2 and NO2 molecules were found to dissociate at S vacancy. The dissociation of NO2 molecules resulted in O atoms located at the S vacancy site and NO molecules physisorbed on O-doped MoS2. The calculated results showed that NO2 molecules can help heal the S vacancy of the MoS2 monolayer. PMID:27198064

  4. Melting of short 1-alcohol monolayers on water: Thermodynamics and x-ray scattering studies

    DEFF Research Database (Denmark)

    Berge, B.; Konovalov, O.; Lajzerowicz, J.;

    1994-01-01

    From surface tension measurements we extract the melting entropy Delta S-2D of fatty-alcohol monolayers on water. Delta S-2D is found to be 4(kB)/mol lower than in the bulk. Because of the role of the conformational entropy, the melting transition is discontinuous for long chains, but tends to be...... the melting point.......From surface tension measurements we extract the melting entropy Delta S-2D of fatty-alcohol monolayers on water. Delta S-2D is found to be 4(kB)/mol lower than in the bulk. Because of the role of the conformational entropy, the melting transition is discontinuous for long chains, but tends...

  5. The Interface between Gd and Monolayer MoS2: A First-Principles Study

    KAUST Repository

    Zhang, Xuejing

    2014-12-08

    We analyze the electronic structure of interfaces between two-, four- and six-layer Gd(0001) and monolayer MoS2 by first-principles calculations. Strong chemical bonds shift the Fermi energy of MoS2 upwards into the conduction band. At the surface and interface the Gd f states shift to lower energy and new surface/interface Gd d states appear at the Fermi energy, which are strongly hybridized with the Mo 4d states and thus lead to a high spin-polarization (ferromagnetically ordered Mo magnetic moments of 0.15 μB). Gd therefore is an interesting candidate for spin injection into monolayer MoS2.

  6. The work function of sub-monolayer cesium-covered gold: A photoelectronspectroscopy study

    Energy Technology Data Exchange (ETDEWEB)

    LaRue, J.L.; White, J.D.; Nahler, N.H.; Liu, Z.; Sun, Y.; Pianetta, P.A.; Auerbach, D.J.; Wodtke, A.M.; /SLAC, SSRL /UC, Santa Barbara, Chem. Dept.

    2008-06-13

    Using visible and X-ray photoelectron spectroscopy we measured the work function of a Au(111) surface at a well-defined sub-monolayer coverage of Cs. For a Cs coverage producing a photoemission maximum with a He-Ne laser, the work function is 1.61 {+-} 0.08 eV consistent with previous assumptions used to analyze vibrationally promoted electron emission. A discussion of possible Cs layer structures is also presented.

  7. Theoretical study of the interaction of electron donor and acceptor molecules with monolayer WS2

    International Nuclear Information System (INIS)

    With the aim of understanding recent experimental data concerning molecular doping in WS2-based FET gas sensors, we have investigated the interaction of NH3 and H2O molecules with monolayer WS2, by means of first-principles calculations. The structural relaxations and total energy calculations are performed to determine the preferential binding configurations and it is found that both NH3 and H2O molecules are physisorbed on monolayer WS2. The Bader analysis combined with the plane-averaged differential charge density results indicate that NH3 acts as the electron donor, while H2O acts as the electron acceptor, leading to n- and p-type doping of WS2, respectively. The charge transfer mechanism is discussed in light of the mixing of the molecular highest occupied molecular orbital and lowest unoccupied molecular orbital with the underlying WS2 orbitals. In addition, the modification of the work function is found to be almost linearly dependent on the total charge transfer. The modification of the work function and the carrier concentration can be obtained by tuning the molecule coverages, without destroying the band structure of monolayer WS2. The electrical sensitivities to the gas adsorption make WS2 a gas sensor that promises wide-ranging applications. (paper)

  8. Neutron scattering study of 36 Ar monolayer films adsorbed on graphite

    DEFF Research Database (Denmark)

    Taub, H.; da Costa Carneiro, Kim; Kjems, Jørgen;

    1977-01-01

    surfaces at low temperatures) are observed to decrease smoothly above 40 K, falling from 100 to 15 Å at 80 K. Little if any positional order remains at temperatures where the nearest-neighbor distance in the monolayer matches that of a registered √3×√3 phase. The spectrum of neutrons inelastically......Diffraction of neutrons from 36 Ar monolayers adsorbed on graphite basal planes indicates that an ordered, two-dimensional (2D) triangular lattice is formed at low temperature. The lattice constant is found to be slightly larger than that of the bulk 3D solid but significantly smaller than...... that of a registered √3×√3 overlayer. Thermal expansion of the monolayer is anomalously large; up to 60 K the linear expansion is 4.5 times greater than in the 3D solid. There is no evidence of a sharp melting transition. Instead, the positional correlations (which extend to the full dimensions of the crystallite...

  9. Gas-Phase Reactions of Atomic Gold Cations with Linear Alkanes (C2-C9).

    Science.gov (United States)

    Zhang, Ting; Li, Zi-Yu; Zhang, Mei-Qi; He, Sheng-Gui

    2016-06-30

    To develop proper ionization methods for alkanes, the reactivity of bare or ligated transition metal ions toward alkanes has attracted increasing interests. In this study, the reactions of the gold cations with linear alkanes from ethane up to nonane (CnH2n+2, n = 2-9) under mild conditions have been characterized by mass spectrometry and density functional theory calculations. When reacting with Au(+), small alkanes (n = 2-6) were confirmed to follow specific reaction channels of dehydrogenation for ethane and hydride transfer for others to generate product ions characteristic of the original alkanes, which indicates that Au(+) can act as a reagent ion to ionize alkanes from ethane to n-hexane. Strong dependence of the chain length of alkanes was observed for the rate constants and reaction efficiencies. Extensive fragmentation took place for larger alkanes (n > 6). Theoretical results show that the fragmentation induced by the hydride transfer occurs after the release of AuH. Moreover, the fragmentation of n-heptane was successfully avoided when the reaction took place in a high-pressure reactor. This implies that Au(+) is a potential reagent ion to ionize linear and even the branched alkanes. PMID:27266670

  10. Resonant diffusion of normal alkanes in zeolites: Effect of the zeolite structure and alkane molecule vibrations

    CERN Document Server

    Tsekov, R

    2015-01-01

    Diffusion of normal alkanes in one-dimensional zeolites is theoretically studied on the basis of the stochastic equation formalism. The calculated diffusion coefficient accounts for the vibrations of the diffusing molecule and zeolite framework, molecule-zeolite interaction, and specific structure of the zeolite. It is shown that when the interaction potential is predominantly determined by the zeolite pore structure, the diffusion coefficient varies periodically with the number of carbon atoms of the alkane molecule, a phenomenon called resonant diffusion. A criterion for observable resonance is obtained from the balance between the interaction potentials of the molecule due to the atomic and pore structures of the zeolite. It shows that the diffusion is not resonant in zeolites without pore structure, such as ZSM-12. Moreover, even in zeolites with developed pore structure no resonant dependence of the diffusion constant can be detected if the pore structure energy barriers are not at least three times high...

  11. First-principles study of the effects of mechanical strains on the radiation hardness of hexagonal boron nitride monolayers

    Science.gov (United States)

    Peng, Qing; Ji, Wei; de, Suvranu

    2012-12-01

    We investigate the strain effect on the radiation hardness of hexagonal boron nitride (h-BN) monolayers using density functional theory calculations. Both compressive and tensile strains are studied in elastic domains along the zigzag, armchair, and biaxial directions. We observe a reduction in radiation hardness to form boron and nitrogen monovacancies under all strains. The origin of this effect is the strain-induced reduction of the energy barrier to displace an atom. An implication of our results is the vulnerability of strained nanomaterials to radiation damage.

  12. Study of Alkylthiolate Self-assembled Monolayers on Au(111) Using a Semilocal meta-GGA Density Functional

    DEFF Research Database (Denmark)

    Ferrighi, Lara; Pan, Yun-xiang; Grönbeck, Henrik;

    2012-01-01

    We present a density functional theory study of the structure and stability of self-assembled monolayers (SAMs) of alkylthiolate on Au(111) as a function of the alkyl chain length. The most favorable structure of the SAMs involves an RS–Au–SR complex (S being sulfur, R being an alkyl chain) formed...... particular, the use of M06-L yields an increased stability of the SAMs with increasing alkyl chain length and an increased attractive interaction between RS–Au–SR complexes at shorter distances....

  13. Atomic force microscopy study of the adsorption of protein molecules on transferred Langmuir monolayer

    International Nuclear Information System (INIS)

    Ordered protein films have been obtained by the adsorption of protein molecules on a Langmuir monolayer, which had previously formed on a silicon substrate, using the Langmuir-Blodgett and molecular self-organization methods. A mixture of cholesterol with dipalmitoylphosphatidylcholine (DPPC) and a polymer-cellulose acetopivalinate-were used as immobilization materials. Protein molecules (catalase and alkaline phosphatase) immobilized on solid substrates have been investigated by atomic force micros-copy. It was shown that the developed combined technique provides a deposition of homogeneous ultrathin protein films with a high degree of filling.

  14. Alkane inducible proteins in Geobacillus thermoleovorans B23

    Directory of Open Access Journals (Sweden)

    Kato Tomohisa

    2009-03-01

    Full Text Available Abstract Background Initial step of β-oxidation is catalyzed by acyl-CoA dehydrogenase in prokaryotes and mitochondria, while acyl-CoA oxidase primarily functions in the peroxisomes of eukaryotes. Oxidase reaction accompanies emission of toxic by-product reactive oxygen molecules including superoxide anion, and superoxide dismutase and catalase activities are essential to detoxify them in the peroxisomes. Although there is an argument about whether primitive life was born and evolved under high temperature conditions, thermophilic archaea apparently share living systems with both bacteria and eukaryotes. We hypothesized that alkane degradation pathways in thermophilic microorganisms could be premature and useful to understand their evolution. Results An extremely thermophilic and alkane degrading Geobacillus thermoleovorans B23 was previously isolated from a deep subsurface oil reservoir in Japan. In the present study, we identified novel membrane proteins (P16, P21 and superoxide dismutase (P24 whose production levels were significantly increased upon alkane degradation. Unlike other bacteria acyl-CoA oxidase and catalase activities were also increased in strain B23 by addition of alkane. Conclusion We first suggested that peroxisomal β-oxidation system exists in bacteria. This eukaryotic-type alkane degradation pathway in thermophilic bacterial cells might be a vestige of primitive living cell systems that had evolved into eukaryotes.

  15. Structure of solid monolayers and multilayers of -hexane on graphite

    Indian Academy of Sciences (India)

    M Krishnan; S Balasubramanian; S Clarke

    2003-10-01

    We present all-atom molecular dynamics simulations of -hexane on the basal plane of graphite at monolayer and multilayer coverages. In keeping with experimental data, we find the presence of ordered adsorbed layers both at single monolayer coverage and when the adsorbed layer coexists with excess liquid adsorbate. Using a simulation method that does not impose any particular periodicity on the adsorbed layer, we quantitatively compare our results to the results of neutron diffraction experiments and find a structural transition from a uniaxially incommensurate lattice to a fully commensurate structure on increasing the coverage from a monolayer to a multilayer. The zig-zag backbone planes of all the alkane molecules lie parallel to the graphite surface at the multilayer coverage, while a few molecules are observed to attain the perpendicular orientation at monolayer coverage.

  16. Catalytic conversion of light alkanes

    Energy Technology Data Exchange (ETDEWEB)

    Lyons, J.E.

    1992-06-30

    The second Quarterly Report of 1992 on the Catalytic Conversion of Light Alkanes reviews the work done between April 1, 1992 and June 31, 1992 on the Cooperative Agreement. The mission of this work is to devise a new catalyst which can be used in a simple economic process to convert the light alkanes in natural gas to oxygenate products that can either be used as clean-burning, high octane liquid fuels, as fuel components or as precursors to liquid hydrocarbon uwspomdon fuel. During the past quarter we have continued to design, prepare, characterize and test novel catalysts for the mild selective reaction of light hydrocarbons with air or oxygen to produce alcohols directly. These catalysts are designed to form active metal oxo (MO) species and to be uniquely active for the homolytic cleavage of the carbon-hydrogen bonds in light alkanes producing intermediates which can form alcohols. We continue to investigate three molecular environments for the active catalytic species that we are trying to generate: electron-deficient macrocycles (PHASE I), polyoxometallates (PHASE II), and regular oxidic lattices including zeolites and related structures as well as other molecular surface structures having metal oxo groups (PHASE I).

  17. From monomer to monolayer: a global optimisation study of (ZnO)n nanoclusters on the Ag surface.

    Science.gov (United States)

    Demiroglu, Ilker; Woodley, Scott M; Sokol, Alexey A; Bromley, Stefan T

    2014-12-21

    We employ global optimisation to investigate how oxide nanoclusters of increasing size can best adapt their structure to lower the system energy when interacting with a realistic extended metal support. Specifically, we focus on the (ZnO)@Ag(111) system where experiment has shown that the infinite Ag(111)-supported ZnO monolayer limit corresponds to an epitaxially 7 : 8 matched graphene-like (Zn(3)O(3))-based hexagonal sheet. Using a two-stage search method based on classical interatomic potentials and then on more accurate density functional theory, we report global minina candidate structures for Ag-supported (ZnO)n cluster with sizes ranging from n = 1-24. Comparison with the respective global minina structure of free space (ZnO)n clusters reveals that the surface interaction plays a decisive role in determining the lowest energy Ag-supported (ZnO)n cluster structures. Whereas free space (ZnO)n clusters tend to adopt cage-like bubble structures as they grow larger, Ag-supported (ZnO)n clusters of increasing size become progressively more like planar cuts from the infinite graphene-like ZnO single monolayer. This energetic favourability for planar hexagonal Ag-supported clusters over their 3D counterparts can be partly rationalised by the ZnO-Ag(111) epitaxial matching and the increased number of close interactions with the Ag surface. Detailed analysis shows that this tendency can also be attributed to the capacity of 2D clusters to distort to improve their interaction with the Ag surface relative to more rigid 3D bubble cluster isomers. For the larger sized clusters we find that the adsorption energies and most stable structural types appear to be rather converged confirming that our study makes a bridge between the Ag-supported ZnO monomer and the infinite Ag-supported ZnO monolayer.

  18. Electrochemical and Photoelectrochemical Study of Self-assembled Monolayer of Phytic Acid on Brass

    Institute of Scientific and Technical Information of China (English)

    XU Qun-Jie; WAN Zong-Yue; ZHOU Guo-Ding; YIN Ren-He; CAO Wei-Min; LIN Chang-Jian

    2008-01-01

    Phytic acid is an environment-friendly reagent for processing metals.The anticorrosion and inhibiting mechanism for phytic acid monolayers self-assembled on a brass (HSn70-1) electrode has been investigated by using electrochemical and photocurrent response methods.The electrochemical measurements indicate that phytic acid is liable to form surface complexes on the brass electrode,and the self-assembled monolayers (SAM) change the structure of the electric double-layer and shift the potential of zero charge positively.The photochemical measurement indicates that the brass electrode shows a p-type photoresponse owing to the formation of a Cu2O layer on its surface,and the presence of SAM weakens significantly the photoresponse,suggesting an excellent effect on anticorrosion,which is consistent with the EIS and polarization curve measurements.Adsorption of phytic acid was found to be typical of chemisorption,which can be reasonably described on the basis of the Langmuir isotherm.

  19. CO oxidation catalyzed by silicon carbide (SiC) monolayer: A theoretical study.

    Science.gov (United States)

    Wang, Nan; Tian, Yu; Zhao, Jingxiang; Jin, Peng

    2016-05-01

    Developing metal-free catalysts for CO oxidation has been a key scientific issue in solving the growing environmental problems caused by CO emission. In this work, the potential of the silicon carbide (SiC) monolayer as a metal-free catalyst for CO oxidation was systematically explored by means of density functional theory (DFT) computations. Our results revealed that CO oxidation reaction can easily proceed on SiC nanosheet, and a three-step mechanism was proposed: (1) the coadsorption of CO and O2 molecules, followed by (2) the formation of the first CO2 molecule, and (3) the recovery of catalyst by a second CO molecule. The last step is the rate-determining one of the whole catalytic reaction with the highest barrier of 0.65eV. Remarkably, larger curvature is found to have a negative effect on the catalytic performance of SiC nanosheet for CO oxidation. Therefore, our results suggested that flat SiC monolayer is a promising metal-free catalyst for CO oxidation.

  20. Studies of low temperature photoluminescence spectra and excitonic valley polarization in monolayer MoTe2

    Science.gov (United States)

    Koirala, Sandhaya; Mouri, Shinichiro; Miyauchi, Yuhei; Matsuda, Kazunari; Kyoto University Team

    Recently, atomically thin layered transition-metal dichalcogenide (TMDs) in the form MX2 (M = Mo, W, X = S, Se, Te) have attracted much interest from the viewpoints of their fundamental physics and potential applications. The characteristic optical features of semiconducting TMDs arise from excitons confined in their atomically thin layers. Molybdenum ditelluride MoTe2 has attracted emerging research interest because of optical gap energy (lowest exciton transition) of 1.09 eV, and large spin-orbit coupling of 250 meV. Temperature-dependent photoluminescence (PL) and polarization-resolved PL measurement were performed for mechanically exfoliated monolayer MoTe2 from 4.4 to 300 K. At a low temperature, the PL spectra from MoTe2 show two sharp peaks for excitons and charged excitons (trions). The systematic temperature-dependent PL measurements revel that the homogeneous linewidth of the exciton peak broadens linearly as the temperature increased due to exciton-acoustic-phonon interactions. From polarization-resolved PL measurements, the valley polarization of above 40 % in the exciton state has been observed at low temperatures. In this meeting, we will discuss about exciton dephasing and valley polarization in monolayer MoTe2.

  1. Phase Equilibria of Mixtures Containing Glycol and n-Alkane: Experimental Study of Infinite Dilution Activity Coefficients and Modeling Using the Cubic-Plus-Association Equation of State

    DEFF Research Database (Denmark)

    Afzal, Waheed; Breil, Martin Peter; Théveneau, Pascal;

    2009-01-01

    In this work, we report the infinite dilution activity coefficients for four n-alkanes (n-pentane, n-hexane, n-heptane, and n-octane) in monoethylene glycol in the temperature range from 298 to 334 K and at atmospheric pressure. Experimental data were measured using a previously described inert g...... of infinite dilution activity coefficient data for estimating binary interaction parameters of the CPA EoS for the description of whole vapor−liquid equilibria. Furthermore, the variation in the values of the interaction parameters is discussed for different glycol systems.......In this work, we report the infinite dilution activity coefficients for four n-alkanes (n-pentane, n-hexane, n-heptane, and n-octane) in monoethylene glycol in the temperature range from 298 to 334 K and at atmospheric pressure. Experimental data were measured using a previously described inert gas...... stripping technique. The new experimental data are compared with the literature data whenever possible. The experimental infinite dilution activity coefficients of several alkanes from n-pentane to n-hexadecane in monoethylene glycol, diethylene glycol, triethylene glycol, and tetraethylene glycol...

  2. a Heat Capacity Study of Para-Hydrogen Monolayers on Graphite.

    Science.gov (United States)

    Motteler, Frederick Clark

    The heat capacity of monolayer p-H(,2) adsorbed on graphite foam has been measured over the 0.0631(ANGSTROM)(' -2) to 0.0891(ANGSTROM)('-2) density range and the 2 to 25(DEGREES)K temperature range. Specific heat peaks are observed over almost the entire density range and are similar to those observed for ('4)He and ('3)He monolayers on graphite for similar densities. Low density data (0.0631(ANGSTROM)('-2) to 0.0727(ANGSTROM)(' -2)) contains a heat capacity peak attributed to the commensurate order-disorder transition. At commensurate density. 0.0637(ANGSTROM)(' -2), the peak attains a maximum height of C/Nk(,b) = 11.7 at 21.4(DEGREES)K and may be characterized by the critical exponent (alpha) = 0.33. For temperatures below the order -disorder transition, the commensurate monolayer heat capacity is characterized by Einstein like behavior with (theta)(,E) = 53.4(DEGREES)K. High density data (0.0787(ANGSTROM)('-2) to 0.0815(ANGSTROM)(' -2)) contains a heat capacity peak attributed to the disordering of a close packed triangular incommensurate solid. The incommensurate solid is characterized by its Debye like heat capacity behavior. The density region between the commensurate structure and incommensurate solid (0.0707(ANGSTROM)('-2) to 0.772(ANGSTROM)(' -2)) contains two heat capacity peaks. At about 20(DEGREES)K there is broad rounded remnant of the order-disorder peak. At lower temperatures (6 to 9(DEGREES)K) there is a small, but very sharp heat capacity peak. The peak attains a maximum height of C/Nk(,b) = 0.89 at a density of 0.0727(ANGSTROM)(' -2) and a temperature of 9.54(DEGREES)K. The remnant of the order-disorder transition seen in p-H(,2) data, together with re-examination of ('4)He data indicates that a shoulder-like remnant intersects the melting line. The melting peak of ('4)He undergoes significant change at the intersection point. The low temperature intermediate density region is consistent with a striped phase of domain walls. The sharp low

  3. First-principle study of hydrogenation on monolayer MoS2

    Science.gov (United States)

    Xu, Yong; Li, Yin; Chen, Xi; Zhang, Chunfang; Zhang, Ru; Lu, Pengfei

    2016-07-01

    The structural and electronic properties of hydrogenation on 1H-MoS2 and 1T-MoS2 have been systematically explored by using density functional theory (DFT) calculations. Our calculated results indicate an energetically favorable chemical interaction between H and MoS2 monolayer for H adsorption when increasing concentration of H atoms. For 1H-MoS2, single H atom adsorption creates midgap approaching the fermi level which increases the n-type carrier concentration effectively. As a consequence, its electrical conductivity is expected to increase significantly. For 1T-MoS2, H atoms adsorption can lead to the opening of a direct gap of 0.13eV compared to the metallic pristine 1T-MoS2.

  4. Formation and dissolution processes of the 6-thioguanine (6TG) self-assembled monolayer. A kinetic study.

    Science.gov (United States)

    Madueño, Rafael; Pineda, Teresa; Sevilla, José Manuel; Blázquez, Manuel

    2005-02-01

    This is a report on the kinetics of the destruction and formation processes of the 6-thioguanine self-assembled monolayer (6TG SAM) on a mercury electrode from acid solutions by chronoamperometry. The destruction of the 6TG SAM that has been previously formed under open circuit potential conditions is carried out by stepping the potential from an initial value where the chemisorbed layer is stable up to potentials where the molecules are no longer chemisorbed. The destruction of the SAM has been described by a model that involves three types of contributions: (i) a Langmuir-type adsorption process, (ii) a 2D nucleation mechanism followed by a growth controlled by surface diffusion, and (iii) a 2D nucleation mechanism followed by a growth at a constant rate. The nonlinear fit of the experimental transients by using this procedure allows the quantitative determination of the individual contributions to the overall process. The kinetics of the formation process is studied under electrochemical conditions. The chronoamperometric experiment allows us to monitor the early stages of 6TG SAM formation. The implications of the physisorbed state at low potentials in the type of monolayer formation and destruction processes as well as the influence of temperature are also discussed. PMID:16851120

  5. Langmuir monolayers and Differential Scanning Calorimetry for the study of the interactions between camptothecin drugs and biomembrane models.

    Science.gov (United States)

    Casadó, Ana; Giuffrida, M Chiara; Sagristá, M Lluïsa; Castelli, Francesco; Pujol, Montserrat; Alsina, M Asunción; Mora, Margarita

    2016-02-01

    CPT-11 and SN-38 are camptothecins with strong antitumor activity. Nevertheless, their severe side effects and the chemical instability of their lactone ring have questioned the usual forms for its administration and have focused the current research on the development of new suitable pharmaceutical formulations. This work presents a biophysical study of the interfacial interactions of CPT-11 and SN-38 with membrane mimetic models by using monolayer techniques and Differential Scanning Calorimetry. The aim is to get new insights for the understanding of the bilayer mechanics after drug incorporation and to optimize the design of drug delivery systems based on the formation of stable bilayer structures. Moreover, from our knowledge, the molecular interactions between camptothecins and phospholipids have not been investigated in detail, despite their importance in the context of drug action. The results show that neither CPT-11 nor SN-38 disturbs the structure of the complex liposome bilayers, despite their different solubility, that CPT-11, positively charged in its piperidine group, interacts electrostatically with DOPS, making stable the incorporation of a high percentage of CPT-11 into liposomes and that SN-38 establishes weak repulsive interactions with lipid molecules that modify the compressibility of the bilayer without affecting significantly neither the lipid collapse pressure nor the miscibility pattern of drug-lipid mixed monolayers. The suitability of a binary and a ternary lipid mixture for encapsulating SN-38 and CPT-11, respectively, has been demonstrated. PMID:26656185

  6. Molecular dynamics study of temperature-dependent ripples in monolayer and bilayer graphene on 6H-SiC surfaces

    Institute of Scientific and Technical Information of China (English)

    Tang Chao; Wei Xiao-Lin; Tan Xin; Peng Xiang-Yang; Sun Li-Zhong; Zhong Jian-Xin

    2012-01-01

    Using classical molecular dynamics and a simulated annealing technique,we show that microscopic corrugations occur in monolayer and bilayer graphene on 6H-SiC substrates.From an analysis of the atomic configurations,two types of microscopic corrugations are identified,namely periodic ripples at room temperature and random ripples at high temperature.Two different kinds of ripple morphologies,each with a periodic structure,occur in the monolayer graphene due to the existence of a coincidence lattice between graphene and the SiC terminated surface (Si- or C-terminated surface).The effect of temperature on microscopic ripple morphology is shown through analysing the roughness of the graphene.A temperature-dependent multiple bonding conjugation is also shown by the broad distribution of the carbon-carbon bond length and the bond angle in the rippled graphene on the SiC surface.These results provide atomic-level information about the rippled graphene layers on the two polar faces of the 6H-SiC substrate,which is useful not only for a better understanding of the stability and structural properties of graphene,but also for the study of the electronic properties of graphene-based devices.

  7. Adsorption and dissociation of O2 on MoSe2 and MoTe2 monolayers: ab initio study

    Science.gov (United States)

    Zhu, X. F.; Wang, L.; Chen, L. F.

    2014-07-01

    Adsorption and dissociation of O2 molecule on the MoSe2 and MoTe2 monolayers are studied by using density functional theory (DFT) within the generalized gradient approximation (GGA) and a supercell approach. The physisorbed O2 molecule on MoSe2 and MoTe2 with a magnetic moment (MM) close to that for an isolated O2 molecule has small adsorption energy and long distance from the surface. The dissociative adsorption of configuration R5(R6) is the most stable adsorption site, whereas the chemisorption of O2 is unfavorable at all adsorption sites. The dissociative adsorption of configuration R4 induces dramatic changes of electronic structures and localized spin polarization both for monolayer MoSe2 and MoTe2. The analysis of electronic density of states (DOSs) shows that the contribution of spin polarization is mainly from the hybridization between O-p, Se(Te)-p and Mo-d orbitals.

  8. Cloning and expression of three ladA-type alkane monooxygenase genes from an extremely thermophilic alkane-degrading bacterium Geobacillus thermoleovorans B23.

    Science.gov (United States)

    Boonmak, Chanita; Takahashi, Yasunori; Morikawa, Masaaki

    2014-05-01

    An extremely thermophilic bacterium, Geobacillus thermoleovorans B23, is capable of degrading a broad range of alkanes (with carbon chain lengths ranging between C11 and C32) at 70 °C. Whole-genome sequence analysis revealed that unlike most alkane-degrading bacteria, strain B23 does not possess an alkB-type alkane monooxygenase gene. Instead, it possesses a cluster of three ladA-type genes, ladAαB23, ladAβB23, and ladB B23, on its chromosome, whose protein products share significant amino acid sequence identities, 49.8, 34.4, and 22.7 %, respectively, with that of ladA alkane monooxygenase gene found on a plasmid of Geobacillus thermodetrificans NG 80-2. Each of the three genes, ladAαB23, ladAβB23, and ladB B23, was heterologously expressed individually in an alkB1 deletion mutant strain, Pseudomonas fluorescens KOB2Δ1. It was found that all three genes were functional in P. fluorescens KOB2Δ1, and partially restored alkane degradation activity. In this study, we suggest that G. thermoleovorans B23 utilizes multiple LadA-type alkane monooxygenases for the degradation of a broad range of alkanes.

  9. Catalytic isomerization of light alkanes

    OpenAIRE

    Løften, Thomas

    2004-01-01

    In recent years the levels of sulfur and benzene in the gasoline pool have been reduced, and in the future there may also be new regulations on vapor pressure and the level of aromatics and olefins as well. The limitations on vapor pressure and aromatics will lead to reduced use of C4 and reformate respectively. The branched isomers of C5 and C6 alkanes have high octane numbers compared to the straight chain isomers, and are consequently valuable additives to the gasoline pool. To maintain th...

  10. Reactivation of coked H-ZSM-5 by treatment with hydrogen and alkanes

    Energy Technology Data Exchange (ETDEWEB)

    Bauer, F.; Ernst, H. [Univ. of Leipzig (Germany); Geidel, E. [Univ. of Hamburg (Germany); Schoedel, R. [Leuna-Werke GmbH (Germany)

    1996-11-01

    The conversion of methanol to hydrocarbons on zeolite H-ZSM-5, in particular the long-term stability of the catalyst, was studied under different reaction conditions. Whereas no significant change in the product distribution was observed, hydrogen and alkane-containing recycle gases show lower deactivation rates than nitrogen. In addition, spent catalysts were partially reactivated by alkane treatment, increasing the time on stream before an oxidative regeneration procedure is required. Lower alkanes such as propane and isobutane yield the best results. The influence of hydrogen-containing gases on the deactivation rate and on the nature of coke on zeolite H-ZSM-5 indicates dissociative adsorption of hydrogen and alkanes on a few sites with enhanced activity. Surface hydrogen species formed by adsorption of alkanes are assumed to make possible the hydrocracking of carbonaceous deposits. 20 refs., 6 figs., 2 tabs.

  11. Magnetic monolayers on semiconducting substrates. An in situ FMR study of Fe-based heterostructures

    Energy Technology Data Exchange (ETDEWEB)

    Zakeri Lori, K.

    2007-10-18

    The growth, magnetic anisotropy, g-factor, and magnetization of Fe monolayers grown on GaAs(001), InAs(001), and InP(001) are investigated by a combination of in situ ferromagnetic resonance and SQUID magnetometry as a function of temperature and film thickness. The effect of stress caused by the lattice mismatch and the surface reconstruction on the magnetic anisotropy is quantified. An in-plane spin reorientation transition as a function of film thickness is observed at room temperature for all systems. A magneto-elastic model is used to explain the direction of the easy axis, the spin reorientation transition, and the contributions to the magnetic anisotropy terms using the stress components measured directly by in situ IV-low-energy electron diffraction. While the model gives a quantitative explanation of the out-of-plane magnetic anisotropy, changes of the electronic interface structure have to be taken into account for the in-plane magnetic anisotropy. The influence of Ag and Au buffer and cap layers on the magnetic anisotropy terms are determined. The temperature dependence of the total magnetic anisotropy, as well as the surface-interface and volume contribution to the magnetic anisotropy are determined for Fe monolayers on GaAs(001). It is demonstrated that the temperature dependence of the magnetic anisotropy is correlated with the temperature dependence of the magnetization according to the Callen-Callen model. The temperature dependence of the volume contribution to the perpendicular magnetic anisotropy is fully explained by the temperature dependence of the magneto-elastic anisotropy. A temperature-driven morphological transformation occurring at a temperature higher than 550 K depending on the film thickness is observed. The thin Fe3Si binary Heusler structure epitaxially grown on MgO(001) is investigated. In addition to the structural properties, magnetic anisotropy, magnetization, g-factor, spin, and orbital magnetism, the magnetic relaxation

  12. First-principles study of B, C, N and F doped graphene-like MgO monolayer

    Science.gov (United States)

    Wu, Ping; Huang, Min; Cheng, Wenjing; Tang, Fuling

    2016-07-01

    Based on the first-principles calculations, we have investigated the stable geometries, electronic and magnetic properties of the graphene-like MgO monolayer with O atom substituted by B, C, N, and F atoms. The formation energy decreases in the order of B>C>N>F, which may be influenced by the different electronegativities. The band gaps of p-type doped MgO monolayers are tunable due to the emergence of impurity states within the band gap, while F-doped MgO monolayer realizes the transition from semiconductor to metal. The results show that p-type doped MgO monolayer exhibit magnetic behaviors due to polarizations of dopants and surrounding Mg or O atoms near the dopants, while no magnetism is observed in the case of F doped MgO monolayer. These results are potentially useful for spintronic applications and the development of magnetic nanostructures.

  13. Lipophilization of ascorbic acid: a monolayer study and biological and antileishmanial activities.

    Science.gov (United States)

    Kharrat, Nadia; Aissa, Imen; Sghaier, Manel; Bouaziz, Mohamed; Sellami, Mohamed; Laouini, Dhafer; Gargouri, Youssef

    2014-09-17

    Ascorbyl lipophilic derivatives (Asc-C2 to Asc-C(18:1)) were synthesized in a good yield using lipase from Staphylococcus xylosus produced in our laboratory and immobilized onto silica aerogel. Results showed that esterification had little effect on radical-scavenging capacity of purified ascorbyl esters using DPPH assay in ethanol. However, long chain fatty acid esters displayed higher protection of target lipids from oxidation. Moreover, compared to ascorbic acid, synthesized derivatives exhibited an antibacterial effect. Furthermore, ascorbyl derivatives were evaluated, for the first time, for their antileishmanial effects against visceral (Leishmania infantum) and cutaneous parasites (Leishmania major). Among all the tested compounds, only Asc-C10, Asc-C12, and Asc-C(18:1) exhibited antileishmanial activities. The interaction of ascorbyl esters with a phospholipid monolayer showed that only medium and unsaturated long chain (Asc-C10 to Asc-C(18:1)) derivative esters were found to interact efficiently with mimetic membrane of leishmania. These properties would make ascorbyl derivatives good candidates to be used in cosmetic and pharmaceutical lipophilic formulations. PMID:25148258

  14. Scanning tunneling microscopy study of organic molecules and self-assembled monolayers

    Science.gov (United States)

    Park, Hayn

    In this dissertation I present my findings on alkanethiol self-assembled monolayers (SAM) on Au(111), as well as investigations of the self-assembly and electron transport properties of a custom-synthesized organic molecule (bis-phenyloxazole: BPO) chosen for its interesting physical and electronic structure. Utilizing scanning tunneling microscopy (STM) techniques, we observed unique molecular structures at the boundaries of single-species alkanethiol SAM domains, and propose packing arrangements for the observed structures. We also found evidence for island formation in alkanethiol SAMs; these islands were dynamic and exhibited ordered packing of the adsorbed molecules. For codeposited two-species (dodecanethiol, octanethiol) SAMs, we observed preferential insertion of the longer molecules at domain boundaries, edges, and defect sites, and found that they tended to segregate into separate domains. Scanning tunneling spectroscopy (STS) of the inserted dodecanethiol molecules revealed evidence of conduction resonances within the HOMO-LUMO gap. We explored the charge transport and self-assembly properties of the BPO molecules on a Au(111) surface. The molecules self-assembled into a novel columnar structure after annealing in vacuum. We compare tunneling spectroscopy results to ab initio computations of the molecular orbitals.

  15. An amorphous monolayer: Infrared spectroscopic and theoretical studies of SO2 on NaCl (100)

    Science.gov (United States)

    Berg, Otto; Ewing, George E.; Meredith, Andrew W.; Stone, Anthony J.

    1996-05-01

    At temperatures between 100 and 110 K, exposing the (100) face of NaCl to unsaturated SO2 gas yields a stable adlayer. Infrared spectra of adsorbed SO2 contain complex resonances near the origins of the molecular symmetric and asymmetric stretching vibrations. On photometric grounds the absolute coverage of the surface is found to be one molecule per exposed Na+Cl- ion pair. The spectra of this monolayer consist of several sharp lines overlapping one broad feature for each molecular mode. By comparison to vibrational excitons in simpler systems, the coexistence of crystalline and amorphous adlayer structures is strongly indicated. This partial ordering is pressure dependent, and develops spontaneously on a time scale of minutes. The disordered component, in contrast, is never in equilibrium with the gas phase. Computational simulations have detailed the microscopic basis of this behavior. Accurate ab initio models of the SO2 molecule and NaCl(100) surface were used in a Monte Carlo simulation of the experimental conditions. At both half and full coverage, an amorphous two-dimensional condensate developed. This is minimally consistent with the polarized infrared photometry. Seemingly equilibrated Monte Carlo runs retained some memory of the initial molecular configuration, again consistent with hysteresis observed in the spectroscopic experiments. No structural order developed in the simulations, but the energetic state of affairs was clarified: the potential driving adsorption and condensation is deep in comparison to available thermal energy, but relatively insensitive to molecular orientation.

  16. Comparative Study of Electroless Copper Film on Different Self-Assembled Monolayers Modified ABS Substrate

    Directory of Open Access Journals (Sweden)

    Jiushuai Xu

    2014-04-01

    Full Text Available Copper films were grown on (3-Mercaptopropyltrimethoxysilane (MPTMS, (3-Aminopropyltriethoxysilane (APTES and 6-(3-(triethoxysilylpropylamino-1,3,5- triazine-2,4-dithiol monosodium (TES self-assembled monolayers (SAMs modified acrylonitrile-butadiene-styrene (ABS substrate via electroless copper plating. The copper films were examined using scanning electron microscopy (SEM and X-ray diffraction (XRD. Their individual deposition rate and contact angle were also investigated to compare the properties of SAMs and electroless copper films. The results indicated that the formation of copper nuclei on the TES-SAMs modified ABS substrate was faster than those on the MPTMS-SAMs and APTES-SAMs modified ABS substrate. SEM images revealed that the copper film on TES-SAM modified ABS substrate was smooth and uniform, and the density of copper nuclei was much higher. Compared with that of TES-SAMs modified resin, the coverage of copper nuclei on MPTMS and APTES modified ABS substrate was very limited and the copper particle size was too big. The adhesion property test demonstrated that all the SAMs enhanced the interfacial interaction between copper plating and ABS substrate. XRD analysis showed that the copper film deposited on SAM-modified ABS substrate had a structure with Cu(111 preferred orientation, and the copper film deposited on TES-SAMs modified ABS substrate is better than that deposited on MPTMS-SAMs or APTES-SAMs modified ABS resins in electromigrtion resistance.

  17. Modeling Study of Hydrogen/Oxygen and n-alkane/Oxygen Counterflow Diffusion Flames%氢、碳氢燃料对向扩散火焰

    Institute of Scientific and Technical Information of China (English)

    汪小卫; 蔡国飙; Vigor Yang

    2011-01-01

    A comprehensive analysis of hydrogen/oxygen and hydrocarbon/oxygen counterflow diffusion flames has been conducted using corresponding detailed reaction mechanisms. The hydrocarbon fuels contain n-alkanes from CH4 to C16H34. The basic diffusion flame structures are demonstrated, analyzed, and compared. The effects of pressure, and strain rate on the flame behavior and energy-release rate for each fuel are examined systematically. The detailed chemical kinetic reaction mechanisms from Lawrence Livermore National Laboratory (LLNL) are employed, and the largest one of them contains 2115 species and 8157 reversible reactions. The results indicate for all of the fuels the flame thickness and heat release rate correlate well with the square root of the pressure multiplied by the strain rate. Under the condition of any strain rate and pressure, H2 has thicker flame than hydrocarbons, while the hydrocarbons have the similar temperature and main products distributions and almost have the same flame thickness and heat release rate. The result indicates that the fuels composed with these hydrocarbons will still have the same flame properties as any pure n-alkane fuel.

  18. Comparing the accuracy of high-dimensional neural network potentials and the systematic molecular fragmentation method: A benchmark study for all-trans alkanes

    Science.gov (United States)

    Gastegger, Michael; Kauffmann, Clemens; Behler, Jörg; Marquetand, Philipp

    2016-05-01

    Many approaches, which have been developed to express the potential energy of large systems, exploit the locality of the atomic interactions. A prominent example is the fragmentation methods in which the quantum chemical calculations are carried out for overlapping small fragments of a given molecule that are then combined in a second step to yield the system's total energy. Here we compare the accuracy of the systematic molecular fragmentation approach with the performance of high-dimensional neural network (HDNN) potentials introduced by Behler and Parrinello. HDNN potentials are similar in spirit to the fragmentation approach in that the total energy is constructed as a sum of environment-dependent atomic energies, which are derived indirectly from electronic structure calculations. As a benchmark set, we use all-trans alkanes containing up to eleven carbon atoms at the coupled cluster level of theory. These molecules have been chosen because they allow to extrapolate reliable reference energies for very long chains, enabling an assessment of the energies obtained by both methods for alkanes including up to 10 000 carbon atoms. We find that both methods predict high-quality energies with the HDNN potentials yielding smaller errors with respect to the coupled cluster reference.

  19. Unfolding of cytochrome c immobilized on self-assembled monolayers. An electrochemical study

    International Nuclear Information System (INIS)

    Highlights: → Denaturation involves intermediate and partially unfolded forms. → An unfolded species displaying the haem with Fe coordinated by two His is observed. → Under unfolding conditions the nature of the SAM influences conformation of protein. → Concentration of the unfolding agent affects redox properties of immobilized protein. - Abstract: The electron transfer (ET) process of progressively unfolded bovine cytochrome c immobilized on different self-assembled monolayers (SAMs) was investigated. Insight is gained on the role of the SAM surface on the functionality of the partially unfolded and non-native forms of the adsorbed protein. Direct electrochemical measurements were performed on cytochrome c adsorbed on mercaptopyridine (MP) and mixed 11-mercapto-1-undecanoic acid/11-mercapto-1-undecanol (MUA/MU) at varying temperature, in the presence of urea as unfolding agent. Under strongly unfolding conditions, a non-native form of cytochrome c, in which the methionine ligand is replaced by a histidine, was observed on both MP and MUA/MU SAMs. The Eo' of the native form, in which the haem is axially coordinated by methionine and histidine, slightly shifts to negative values upon increasing urea concentration. However, the non-native bis-histidinate species shows a much lower Eo' value (by approximately 0.4 V) which is by far enthalpic in origin and largely determined by axial ligand swapping. Analysis of the reduction enthalpies and entropies and of the ET rate constants indicate that the nature of the SAM (hydrophilic or anionic) results in changes in the conformational rearrangement of the cytochrome c under unfolding conditions.

  20. Unfolding of cytochrome c immobilized on self-assembled monolayers. An electrochemical study

    Energy Technology Data Exchange (ETDEWEB)

    Monari, Stefano; Ranieri, Antonio; Bortolotti, Carlo Augusto; Peressini, Silvia [Department of Chemistry, University of Modena and Reggio Emilia, via Campi 183, 41125 Modena (Italy); Tavagnacco, Claudio [Department of Chemistry, University of Trieste, via Giorgieri 1, 34127 Trieste (Italy); Borsari, Marco, E-mail: marco.borsari@unimore.it [Department of Chemistry, University of Modena and Reggio Emilia, via Campi 183, 41125 Modena (Italy)

    2011-08-01

    Highlights: > Denaturation involves intermediate and partially unfolded forms. > An unfolded species displaying the haem with Fe coordinated by two His is observed. > Under unfolding conditions the nature of the SAM influences conformation of protein. > Concentration of the unfolding agent affects redox properties of immobilized protein. - Abstract: The electron transfer (ET) process of progressively unfolded bovine cytochrome c immobilized on different self-assembled monolayers (SAMs) was investigated. Insight is gained on the role of the SAM surface on the functionality of the partially unfolded and non-native forms of the adsorbed protein. Direct electrochemical measurements were performed on cytochrome c adsorbed on mercaptopyridine (MP) and mixed 11-mercapto-1-undecanoic acid/11-mercapto-1-undecanol (MUA/MU) at varying temperature, in the presence of urea as unfolding agent. Under strongly unfolding conditions, a non-native form of cytochrome c, in which the methionine ligand is replaced by a histidine, was observed on both MP and MUA/MU SAMs. The E{sup o}' of the native form, in which the haem is axially coordinated by methionine and histidine, slightly shifts to negative values upon increasing urea concentration. However, the non-native bis-histidinate species shows a much lower E{sup o}' value (by approximately 0.4 V) which is by far enthalpic in origin and largely determined by axial ligand swapping. Analysis of the reduction enthalpies and entropies and of the ET rate constants indicate that the nature of the SAM (hydrophilic or anionic) results in changes in the conformational rearrangement of the cytochrome c under unfolding conditions.

  1. Quasielastic neutron scattering and molecular dynamics simulation studies of the melting transition in butane and hexane monolayers adsorbed on graphite

    DEFF Research Database (Denmark)

    Hervig, K.W.; Wu, Z.; Dai, P.;

    1997-01-01

    Quasielastic neutron scattering experiments and molecular dynamics (MD) simulations have been used to investigate molecular diffusive motion near the melting transition of monolayers of flexible rod-shaped molecules. The experiments were conducted on butane and hexane monolayers adsorbed on an ex......Quasielastic neutron scattering experiments and molecular dynamics (MD) simulations have been used to investigate molecular diffusive motion near the melting transition of monolayers of flexible rod-shaped molecules. The experiments were conducted on butane and hexane monolayers adsorbed...... on an exfoliated graphite substrate, For butane, quasielastic scattering broader than the experimental energy resolution width of 70 mu eV appears abruptly at the monolayer melting point of T-m = 116 K, whereas, for the hexane monolayer, it appears 20 K below the melting transition (T-m = 170 K). To facilitate...... comparison with experiment, quasielastic spectra calculated from the MD simulations were analyzed using the same models and fitting algorithms as for the neutron spectra. This combination of techniques gives a microscopic picture of the melting process in these two monolayers which is consistent with earlier...

  2. 单分子膜研究的方法及现状%Ways and Currmt Situation of Monolayer Studies

    Institute of Scientific and Technical Information of China (English)

    胡杰; 朱谱新

    2001-01-01

    单分子膜一般是将两亲性物质溶解在铺展溶剂中制成铺晨溶液,然后铺展在底液上而得的。在其性质的研究中,测定表面压—面积关系曲线是最基本、也是最重要的一种研究手段。但是,仅有表面压—面积曲线所能了解的信息是远远不够的,因此必须结合另一些手段进行研究,测定表面粘度就是其中很重要的一种。而随着现代光谱仪器的更新、发展,光学方法已日益成为单分子膜研究的一个重要途径。%Monolayers are generally formed at air/weater interface byspreadng proper solutions in which amphiprotic substances ste ressolved. A large number of studies bave been carried out in order to understand the peoperties and structures of the onolayers. Of the researching metiods, the pressurearea curve is the most foumdamental and importamt. The other techniques involve measurement of surface viscosity and optical properties of monolayers. With advancing and developing of spectrometes, sensitive maging techniques have been opening up new prospect for a better understanding of the physics of themonolayers.

  3. A raft-associated species of phosphatidylethanolamine interacts with cholesterol comparably to sphingomyelin. A Langmuir-Blodgett monolayer study.

    Directory of Open Access Journals (Sweden)

    Michal Grzybek

    Full Text Available BACKGROUND: Specific interactions between sphingomyelin (SM and cholesterol (Ch are commonly believed to play a key role in the formation of rafts in the biological membranes. A weakness of this model is the implication that these microdomains are confined to the outer bilayer leaflet. The cytoplasmic leaflet, which contains the bulk of phosphatidylethanolamine (PE, phosphatidylserine (PS and phosphatidylinositol (PI, is thought also to harbour half of the membrane cholesterol. Moreover, SLPE (1-stearoyl-2-linoleoyl-sn-glycero-3-phosphatidyl-ethanolamine has recently been shown to be enriched in isolated detergent-resistant membranes (DRM, and this enrichment was independent of the method of isolation of DRM. METHODOLOGY/PRINCIPAL FINDINGS: Here we present quantitative evidence coming from Langmuir-Blodgett monolayer experiments that SLPE forms complex with Ch similar to that between SM and Ch. The energies of these interactions as calculated form the monolayer studies are highly negative. FRAP analysis showed that NBD-Ch recovery was similar in liposomes composed of DOPC/Ch SM or SLPE but not DPPE, providing further evidence that SLPE may form an l(o phase in the presence of high Ch concentration. Experiments on the solubility of DOPC liposomes containing DPPE/Ch (1ratio1, SM/Ch (1ratio1 or SLPE/Ch (1ratio1 showed the presence of Triton X-100 insoluble floating fraction (TIFF in the case of SM/Ch or SLPE/Ch but not in DPPE/Ch containing liposomes. Quantitative determination of particular lipid species in the TIFF fraction confirms the conclusion that SLPE (or similar PE species could be an important constituent of the inner leaflet raft. CONCLUSION: Such interactions suggest a possible existence of inner-leaflet nanoscale assemblies composed of cholesterol complexes with SLPE or similar unsaturated PE species.

  4. Diffusion of squalene in n-alkanes and squalane.

    Science.gov (United States)

    Kowert, Bruce A; Watson, Michael B; Dang, Nhan C

    2014-02-27

    Squalene, an intermediate in the biosynthesis of cholesterol, has a 24-carbon backbone with six methyl groups and six isolated double bonds. Capillary flow techniques have been used to determine its translational diffusion constant, D, at room temperature in squalane, n-C16, and three n-C8-squalane mixtures. The D values have a weaker dependence on viscosity, η, than predicted by the Stokes-Einstein relation, D = kBT/(6πηr). A fit to the modified relation, D/T = ASE/η(p), gives p = 0.820 ± 0.028; p = 1 for the Stokes-Einstein limit. The translational motion of squalene appears to be much like that of n-alkane solutes with comparable chain lengths; their D values show similar deviations from the Stokes-Einstein model. The n-alkane with the same carbon chain length as squalene, n-C24, has a near-equal p value of 0.844 ± 0.018 in n-alkane solvents. The values of the hydrodynamic radius, r, for n-C24, squalene, and other n-alkane solutes decrease as the viscosity increases and have a common dependence on the van der Waals volumes of the solute and solvent. The possibility of studying squalene in lipid droplets and membranes is discussed.

  5. Molecular-dynamics study of the dynamical excitations in commensurate monolayer films of nitrogen molecules on graphite: A test of the corrugation in the nitrogen-graphite potential

    DEFF Research Database (Denmark)

    Hansen, Flemming Yssing; Bruch, Ludwig Walter

    1995-01-01

    The dynamical excitations in a commensurate monolayer solid of N2 molecules adsorbed on graphite have been studied using molecular-dynamics simulations. Velocity and rotational correlation functions as well as coherent intermediate scattering functions and dynamical structure factors have been...

  6. Crystallization features of normal alkanes in confined geometry.

    Science.gov (United States)

    Su, Yunlan; Liu, Guoming; Xie, Baoquan; Fu, Dongsheng; Wang, Dujin

    2014-01-21

    How polymers crystallize can greatly affect their thermal and mechanical properties, which influence the practical applications of these materials. Polymeric materials, such as block copolymers, graft polymers, and polymer blends, have complex molecular structures. Due to the multiple hierarchical structures and different size domains in polymer systems, confined hard environments for polymer crystallization exist widely in these materials. The confined geometry is closely related to both the phase metastability and lifetime of polymer. This affects the phase miscibility, microphase separation, and crystallization behaviors and determines both the performance of polymer materials and how easily these materials can be processed. Furthermore, the size effect of metastable states needs to be clarified in polymers. However, scientists find it difficult to propose a quantitative formula to describe the transition dynamics of metastable states in these complex systems. Normal alkanes [CnH2n+2, n-alkanes], especially linear saturated hydrocarbons, can provide a well-defined model system for studying the complex crystallization behaviors of polymer materials, surfactants, and lipids. Therefore, a deeper investigation of normal alkane phase behavior in confinement will help scientists to understand the crystalline phase transition and ultimate properties of many polymeric materials, especially polyolefins. In this Account, we provide an in-depth look at the research concerning the confined crystallization behavior of n-alkanes and binary mixtures in microcapsules by our laboratory and others. Since 2006, our group has developed a technique for synthesizing nearly monodispersed n-alkane containing microcapsules with controllable size and surface porous morphology. We applied an in situ polymerization method, using melamine-formaldehyde resin as shell material and nonionic surfactants as emulsifiers. The solid shell of microcapsules can provide a stable three-dimensional (3-D

  7. Hematite nanoparticle monolayers on mica electrokinetic characteristics.

    Science.gov (United States)

    Morga, Maria; Adamczyk, Zbigniew; Oćwieja, Magdalena

    2012-11-15

    Electrokinetic properties of α-Fe(2)O(3) (hematite) nanoparticle monolayers on mica were thoroughly characterized using the streaming potential method. Hematite suspensions were obtained by acidic hydrolysis of ferric chloride. The average size of particles (hydrodynamic diameter), determined by dynamic light scattering (DLS) and AFM, was 22 nm (pH=5.5, I=10(-2)M). The hematite monolayers on mica were produced under diffusion-controlled transport from the suspensions of various bulk concentration. The monolayer coverage, quantitatively determined by AFM and SEM, was regulated within broad limits by adjusting the nanoparticle deposition time. This allowed one to uniquely express zeta potential of hematite monolayers, determined by the streaming potential measurements, in terms of the particle coverage. Such dependencies, obtained for various pH, were successfully interpreted in terms of the three-dimensional electrokinetic model. A universal calibrating graph was produced enabling one to determine hematite monolayer coverage from the measured value of the streaming potential. The influence of the ionic strength, varied between 10(-4) and 10(-2)M, on the zeta potential of hematite monolayers was also studied. Additionally, the stability of monolayers (desorption kinetics) was determined under in situ conditions using the streaming potential method. Our experimental data prove that it is feasible to produce uniform and stable hematite particle monolayers of well-controlled coverage. Such monolayers may find practical applications as universal substrates for protein immobilization (biosensors) and in electrocatalytic applications. PMID:22921408

  8. Theoretical study of the adsorption of a PTCDA monolayer on S-passivated GaAs(l 0 0)

    International Nuclear Information System (INIS)

    This work investigates the adsorption of a PTCDA (3,4,9,10-perylene tetracarboxylic dianhydride) monolayer on a 2 x 1 S-passivated GaAs(1 0 0) surface with density functional based tight binding (DFTB) calculations. The structure of the first monolayer is discussed within the restricted class of surface unit cells including a single PTCDA molecule, and the calculated current-voltage characteristics are used to predict the electronic transport properties of the hybrid system

  9. [Distribution Characteristics and Source Apportionment of n-Alkanes in Water from Yellow River in Henan Section].

    Science.gov (United States)

    Feng, Jing-lan; Xi, Nan-nan; Zhang, Fei; Liu, Shu-hui; Sun, Jian-hui

    2016-03-15

    To investigate the distributions and possible sources of n-alkanes in water and suspended particulate matter from Yellow River in Henan section, 26 water and suspended particulate matter samples were collected in August 2010 and 22 n-alkanes (C₁₄-C₃₆) were quantitatively determined by gas chromatography-mass spectrometer (GC-MS). Potential sources of n-alkanes were analyzed using different characteristic parameters. The results indicated that total concentrations of 22 n-alkanes were 521-5,843 ng · L⁻¹ with a mean concentration of 1,409 ng · L⁻¹, while the total amounts of n-alkanes in the suspended particulate matter were 463-11,142 ng · L⁻¹ with a mean value of 1,951 ng · L⁻¹. The composition profiles of n-alkanes in water showed unimodal distribution with a peak at C₂₅ in water. However, the composition characteristics of n-alkanes in SPM were of bimodal type, but still with the advantage of high carbon hydrocarbons peak at C₂₅. Results of characteristic parameters including CPI, TAR, OEP and % WaxCn showed that n-alkanes in the studied area were derived mainly from combustion of fossil fuel, while terrestrial higher plant played a role in the existence of n-alkanes in water and suspended particulate matter from Yellow River in Henan section. PMID:27337879

  10. Thermodynamic and structural study of two-dimensional melting within monolayers or rare gases or methane physically adsorbed upon the surface of layer-like solids

    International Nuclear Information System (INIS)

    The 2D (two-dimensional) melting of monolayers of rare gases or methane physically adsorbed on the basal face of lamellar solids (graphite, boron nitride and lamellar halides) has been studied. Two different experimental measurements have been made: i) adsorption isotherms; ii) neutron diffraction spectra. The main part of this report deals with the 2D liquid-incommensurate solid transition within monolayers of rare gases or methane adsorbed on the basal face of lamellar halides. This transition is first order. It is observed only if certain conditions of dimensional incompatibility between the substrate and the absorbate are fulfilled. It is little affected by the structure of the underlying substrate. A number of thermodynamic parameters associated with it, are constants once properly scaled. These constants agree well with theoretical estimates for 6-12 Lennard Jones particles adsorbed on a smooth surface. For the monolayer of Xe adsorbed on graphite the temperature of the tricritical point above which melting becomes a continuous transition has been measured. The isotope effect associated with 2D melting has been investigated by comparing the behaviour of monolayers of CH4 and CD4 adsorbed on boron nitride. The vapor pressure of Xe has been determined in the temperature range 101-120 K. (author)

  11. Surface plasmon Raman scattering studies of liquid crystal anchoring on liquid-crystal-based self-assembled monolayers.

    Science.gov (United States)

    Critchley, Kevin; Cheadle, Edward M; Zhang, Hao-Li; Baldwin, Kurt J; Liu, Quanying; Cheng, Yaling; Fukushima, Hitoshi; Tamaki, Takashi; Batchelder, David N; Bushby, Richard J; Evans, Stephen D

    2009-11-26

    We studied the anchoring of 6CB on a series of self-assembled monolayers (SAMs) with a functional group that mimics that of the nematic liquid crystal (LC). The SAMs were first characterized by wetting, Fourier-transform infrared spectroscopy, and surface potential measurements. We found that, in two of these SAMs, the end group dipoles were oriented close to the normal of the surface and that these promoted homeotropic anchoring. In the case of the other SAM, the dipole was oriented parallel to the surface, and planar anchoring was obtained. Raman scattering by adsorbates on thin metal films is enhanced by the electromagnetic fields of surface plasmon polaritons (SPPs). Despite the inherent polarization of SPPs, there have been few reports in which SPP Raman scattering has been used to study molecular orientation. We have developed optical instrumentation to provide efficient excitation and collection of SPP Raman scattered light using attenuated total reflection geometry. The Kretschmann prism coupling configuration was used to excite SPPs on thin (500 A) gold films with adsorbed SAMs of alkanethiols in contact with thin films (50 microm) of the nematic liquid crystal 4'-hexylbiphenyl-4-carbonitrile (6CB, Merck). The anchoring and orientational wetting of the LC 6CB at the interface with omega-functionalized SAMs was studied using this arrangement. In agreement with the results of previous studies, a high-energy surface (-COOH) was found to promote planar anchoring, whereas a low-energy surface (-CF(3)) was found to induce homeotropic anchoring. PMID:19921953

  12. Lateral pressure profiles in lipid monolayers

    NARCIS (Netherlands)

    Baoukina, Svetlana; Marrink, Siewert J.; Tieleman, D. Peter

    2010-01-01

    We have used molecular dynamics simulations with coarse-grained and atomistic models to study the lateral pressure profiles in lipid monolayers. We first consider simple oil/air and oil/water interfaces, and then proceed to lipid monolayers at air/water and oil/water interfaces. The results are qual

  13. Mixed silane monolayers for controlling the surface areal density of click-reactive alkyne groups: a method to assess preferential surface adsorption on flat substrates and a method to verify compositional homogeneity on nanoparticles.

    Science.gov (United States)

    Maidenberg, Yanir; Zhang, Shuo; Luo, Kai; Akhavein, Nima; Koberstein, Jeffrey T

    2013-09-24

    SAMs formed from mixtures of alkyne-silanes and alkane-silanes are used to control the areal density of click-reactive alkyne groups on the surface of flat germanium substrates, silicon wafers, and silica nanoparticles. Two new analytical tools are described for characterization of the mixed SAMs: a thermogravimetric analysis (TGA) technique for quantifying the compositional homogeneity of the mixed monolayers formed on nanoparticles, and an infrared spectroscopy (IR) technique to detect preferential surface adsorption. The TGA technique involves measurement of the change in weight when azide-terminated polymers react with surface alkyne groups on silica nanoparticles via a click reaction, while the IR technique is based on the use of attenuated total reflectance infrared spectroscopy (ATR-IR) to monitor click reactions between azide compounds with infrared "labels" and alkyne-functional mixed SAMs deposited on germanium ATR plates. Upon application of the new characterization techniques, we are able to prove that the mixed silane monolayers show neither phase separation nor preferential surface adsorption on any of the three substrates studied. When reacted with azide terminal polymers, the areal density at saturation, σ(sat) is found to scale with molecular weight according to σ(sat) ≈ N(-0.57). We conclude that mixed monolayers of alkyne-silanes and alkane-silanes are an effective means of controlling the surface areal density of click-reactive alkyne groups on both flat and nanoparticle substrates. PMID:23985021

  14. Adsorption and desorption of noble gases on activated charcoal: I. 133Xe studies in a monolayer and packed bed.

    Science.gov (United States)

    Scarpitta, S C; Harley, N H

    1990-10-01

    Detailed desorption studies using petroleum-based activated charcoals were conducted in monolayers and packed beds. Less extensive studies were conducted on several other types of charcoal. Kinetic studies, using 133Xe, demonstrated the existence of a micropore volume with entrance capillaries that together determined the response characteristics of charcoal to external concentration gradients of tracer gases. This new two-phase model, composed of micropores and entrance capillaries, describes the desorption dynamics of an adsorbed gas in the presence of water vapor. Condensed water vapor in the entrance capillaries of the charcoal reduced the effective pore radius and increased the diffusion half-time. Water could also adversely affect the integrating capability of the charcoal dramatically if the adsorbed water completely blocked the entrance capillaries. The amount of adsorbed water required to block the capillaries varied with the charcoal type and was termed here as the "break-point." The desorption parameters measured in this work can be used to design an improved passive Rn monitor to effectively integrate during a 3-7 d exposure period by eliminating the adverse effects of water vapor. The improved canister design would provide more accurate and reproducible measurements of indoor Rn concentrations than are currently available. PMID:2398007

  15. Supported organoiridium catalysts for alkane dehydrogenation

    Energy Technology Data Exchange (ETDEWEB)

    Baker, R. Thomas; Sattelberger, Alfred P.; Li, Hongbo

    2013-09-03

    Solid supported organoiridium catalysts, a process for preparing such solid supported organoiridium catalysts, and the use of such solid supported organoiridium catalysts in dehydrogenation reactions of alkanes is provided. The catalysts can be easily recovered and recycled.

  16. A DNA self-assembled monolayer for the specific attachment of unmodified double- or single-stranded DNA.

    OpenAIRE

    Bamdad, C

    1998-01-01

    A novel method for DNA surface immobilization and a paradigm for the attachment of unmodified DNA of any length or sequence are described herein. The development of a DNA self-assembled monolayer (DNA-SAM) that incorporates a DNA-thiol into a monolayer of inert alkane thiolates is reported. This DNA-SAM specifically hybridized complementary oligonucleotides while resisting the nonspecific adsorption of noncomplementary DNA and irrelevant proteins. Duplex DNA, having a single-stranded "capture...

  17. Solvation of alkane and alcohol molecules. Energy contributions

    OpenAIRE

    Pais, A. A. C. C.; Sousa, A.; Eusébio, M. E.; Redinha, J. S.

    2001-01-01

    In this work we conduct a systematic ab initio study of the solvation of small alkane, monoalcohol and diol molecules, in polar solvents with different properties. A choice of basis set suitable for the type of compounds under study is presented. The various components of the solvent–solute interaction and the cavitation energy are treated individually and their variation with chain length and introduction of hydroxy groups assessed. The use of solute molecules in which controlled changes are...

  18. Tight-binding model study of substrate induced pseudo-spin polarization and magnetism in mono-layer graphene

    Science.gov (United States)

    Sahu, Sivabrata; Rout, G. C.

    2016-06-01

    We present here a tight-binding model study of generation of magnetism and pseudo-spin polarization in monolayer graphene arising due to substrate, impurity and Coulomb correlation effects. The model Hamiltonian contains the first-, second- and third-nearest-neighbor hopping integrals for π electrons of graphene besides substrate induced gap, impurity interactions and Coulomb correlation of electrons. The Hubbard type Coulomb interactions present in both the sub-lattices A and B are treated within the mean-field approximation. The electronic Green's functions are calculated by using Zubarev's technique and hence the electron occupancies of both sub-lattices are calculated for up and down spins separately. These four temperature dependent occupancies are calculated numerically and self-consistently. Then we have calculated the temperature dependent pseudo-spin polarization, ferromagnetic and anti-ferromagnetic magnetizations. We observe that there exists pseudo-spin polarization for lower Coulomb energy, u gap and impurity effect. For larger Coulomb energy u > 2.5t1, there exists pseudo-spin polarization (p); while ferromagnetic (m) and antiferromagnetic (pm) magnetizations exhibit oscillatory behavior. With increase of the substrate induced gap, the ferromagnetic and antiferromagnetic transition temperatures are enhanced with increase of the substrate induced gap; while polarization (p) is enhanced in magnitude only.

  19. MONOLAYER BEHAVIOR OF SOME STEREOREGULAR POLY(METHACRYLATES)

    NARCIS (Netherlands)

    BRINKHUIS, RHG; SCHOUTEN, AJ

    1992-01-01

    The monolayer behavior of some poly(methacrylates) with short ester side chains (methyl, ethyl, and isobutyl) is studied as a function of the tacticity. In all cases, the isotactic polymers are observed to form expanded monolayers, whereas the syndiotactic materials yield more condensed monolayers.

  20. Nanodimentional Aggregates In Organic Monolayers Studied With Atomic Force Microscopy (AFM) And Fluorescence Lifetime Imaging Microscopy (FLIM)

    Science.gov (United States)

    Ivanov, George R.; Burov, Julian

    2007-04-01

    Organic monolayers from a fluorescently labeled phospholipid (DPPE-NBD) were deposited on solid supports under special conditions that form stable nanometer wide bilayers cylinders that protrude from the monolayer. This molecule was frequently used in sensor applications due to its sensitivity to environment changes. The proposed configuration should provide both fast response times (ultra thin film) and increased sensitivity (greatly increased surface area). AFM can clearly distinguish between the different phases. The height difference between the solid-expanded and the liquid-expanded phase was measured to be 1.4 nm while the bilayer thickness was 5.6 nm. The solid domains show a 20 % decrease in fluorescence lifetime in comparison to the monolayer as measured by FLIM. This difference in lifetimes is explained in the model of fluorescence self quenching in the solid phase due to the molecules being closer to each other.

  1. Tunnel magnetoresistance in Self-Assembled Monolayers Based Tunnel Junctions

    Science.gov (United States)

    Mattana, Richard; Barraud, Clément; Tatay, Sergio; Galbiati, Marta; Seneor, Pierre; Bouzehouane, Karim; Jacquet, Eric; Deranlot, Cyrile; Fert, Albert; Petroff, Frédéric

    2012-02-01

    Organic/molecular spintronics is a rising research field at the frontier between spintronics and organic chemistry. Organic molecule and semiconductors were first seen as promising for spintronics devices due to their expected long spin lifetime. But an exciting challenge has also been to find opportunities arising from chemistry to develop new spintronics functionalities. It was shown that the molecular structure and the ferromagnetic metal/molecule hybridization can strongly influence interfacial spin properties going from spin polarization enhancement to its sign control in spintronics devices. In this scenario, while scarcely studied, self-assembled monolayers (SAMs) are expected to become perfect toy barriers to further test these tailoring properties in molecular magnetic tunnel junctions (MTJs). Due to its very high spin polarization and air stability LSMO has positioned itself as the electrode of choice in most of the organic spintronics devices. We will present a missing building block for molecular spintronics tailoring: the grafting and film characterization of organic monofunctionalized long alkane chains over LSMO. We have obtained 35% of magnetoresistance in LSMO/SAMs/Co MTJs. We will discuss the unusual behaviour of the bias voltage dependence of the TMR.

  2. Packing of ganglioside-phospholipid monolayers

    DEFF Research Database (Denmark)

    Majewski, J.; Kuhl, T.L.; Kjær, K.;

    2001-01-01

    Using synchrotron grazing-incidence x-ray diffraction (GIXD) and reflectivity, the in-plane and out-of-plane structure of mixed ganglioside-phospholipid monolayers was investigated at the air-water interface. Mixed monolayers of 0, 5, 10, 20, and 100 mol% ganglioside GM, and the phospholipid dipa...... polymer groups. Indeed, the lack of packing disruptions by the oligosaccharide groups indicates that protein-GM, interactions, including binding, insertion, chain fluidization, and domain formation (lipid rafts), can be studied in 2-D monolayers using scattering techniques....... monolayers did not affect hydrocarbon tail packing (fluidization or condensation of the hydrocarbon region). This is in contrast to previous investigations of lipopolymer-lipid mixtures, where the packing structure of phospholipid monolayers was greatly altered by the inclusion of lipids bearing hydrophilic...

  3. Study on surface acid-base property of carboxylic acid-terminated self-assembled monolayers by cyclic voltammetry and electro-chemical impedance spectroscopy

    Institute of Scientific and Technical Information of China (English)

    罗立强; 程志亮; 杨秀荣; 汪尔康

    2000-01-01

    Cyclic voltammetry and electrochemical impedance spectroscopy were used to study the surface acid-base property of carboxylic acid-terminated self-assembled monolayers (SAMs). A carboxylic acid-terminated thiol, such as thioctic acid (1,2-dithiolane-3-pentanoic acid), was self-assembled on gold electrodes. Electron transfer between the bulk solution and the SAM modified electrode was studied at different pH using Fe(CN)63 as a probe. The surface pK. of thioctic acid was determined by cyclic voltammetry and electrochemical impedance spectroscopy to be 5.6±0.1 and 5.8±0.1, respectively. The method is compared with other methods of monolayer pK.measurement.

  4. Structure and dynamics of monolayer films of squalane molecules adsorbed on a solid surface

    Science.gov (United States)

    D. T Enevoldsen, A.; Hansen, F. Y.; Diama, A.; Taub, H.

    2003-03-01

    Squalane is a branched alkane (C_30H_62). It consists of a straight chain with 24 carbon atoms, as in tetracosane (C_24H_50), and has six methyl side groups. Branched polymers such as squalane are thought to be better lubricants than n-alkanes. At low temperature, our molecular dynamics (MD) simulations show that the molecules form an ordered monolayer which melts at approximately 325 K compared to the tetracosane monolayer melting point of ˜ 340 K. Our MD simulations indicate the same melting mechanism in the squalane monolayer that was found previously for tetracosane (F. Y. Hansen and H. Taub, Phys. Rev. Lett. 69, 652 (1992).) They also show that the adsorbed molecules are distorted from an all-trans carbon backbone in contrast to what was found for tetracosane. This may explain why the Bragg diffraction peaks were observed to be broader for the squalane monolayer than for tetracosane (D. Fuhrmann, A. P. Graham, L. Criswell, H. Mo, B. Matthies, K. W. Herwig, and H. Taub, Surf. Sci. 482-485, 77 (2001).). The diffusive motion in a squalane monolayer has been investigated by both quasielastic neutron scattering and MD simulations and compared to the dynamics in tetracosane monolayers. Focus will be on differences in the dynamics.

  5. Experimental proof for resonant diffusion of normal alkanes in LTL and ZSM-12 zeolites

    CERN Document Server

    Yoo, K; Smirniotis, P G

    2015-01-01

    The intra-crystalline diffusion of normal alkanes in LTL and ZSM-12 zeolite was experimentally studied via gravimetric measurements performed at different temperatures. A periodic dependence of the diffusion coefficient on the number of carbon atoms in alkane was detected, which is an experimental proof for resonant diffusion. The present observations were described on the base of the existing theory of the resonant diffusion and several important parameters of the alkane-zeolite interaction and zeolite vibrations were obtained. In the considered temperature region the diffusion coefficient follows the Arrhenius law with periodic dependences of the pre-exponential factor and activation energy on the number of carbon atoms in alkanes. A compensation effect of simultaneous increases of the pre-exponential factor and the activation energy was also established.

  6. Short-time Evolution of Alkane-in-Water Nanoemulsions

    OpenAIRE

    Urbina-Villalba, German; Rahn-Chique, Kareem

    2013-01-01

    The stability of alkane-in-water nanoemulsions during the sub-stationary regime is studied by means of Emulsion Stability Simulations (ESS). The effects of Ostwald ripening, flocculation, coalescence, gravity, and hydration forc- es are considered. According to these calculations flocculation and coalescence are predominant during the first few seconds after the preparation of the emulsion. This favors the generation of a right-skewed Drop Size Distribu- tion (DSD). As the system evolves, the...

  7. Phase transitions in diglyceride monolayers studied by computer simulations, pressure-area isotherms and x-ray diffraction

    DEFF Research Database (Denmark)

    Peters, Günther H.J.; Toxværd, S.; Larsen, N.B.;

    1994-01-01

    1,2-sn-diglyceride monolayers exhibit unique and complex phase transitions as a function of surface pressure. The dynamical response of the layer on expanding the film has been investigated by computer simulations, (π-A) isotherms and grazing-incidence X-ray diffraction. Good agreement is found b...

  8. Adsorption of gas molecules on Cu impurities embedded monolayer MoS2: A first- principles study

    Science.gov (United States)

    Zhao, B.; Li, C. Y.; Liu, L. L.; Zhou, B.; Zhang, Q. K.; Chen, Z. Q.; Tang, Z.

    2016-09-01

    Adsorption of small gas molecules (O2, NO, NO2 and NH3) on transition-metal Cu atom embedded monolayer MoS2 was investigated by first-principles calculations based on the density-functional theory (DFT). The embedded Cu atom is strongly constrained on the sulfur vacancy of monolayer MoS2 with a high diffusion barrier. The stable adsorption geometry, charge transfer and electronic structures of these gas molecules on monolayer MoS2 embedded with transition-metal Cu atom are discussed in detail. It is found that the monolayer MoS2 with embedded Cu atom can effectively capture these gas molecules with high adsorption energy. The NH3 molecule acts as electron donor after adsorption, which is different from the other gas molecules (O2, NO, and NO2). The results suggest that MoS2-Cu system may be promising for future applications in gas molecules sensing and catalysis, which is similar to those of the transition-metal embedded graphene.

  9. Phase behavior of mixed Ar-Kr, Ar-Xe and Kr-Xe monolayer films on graphite: a Monte Carlo study.

    Science.gov (United States)

    Patrykiejew, A

    2013-01-01

    Using Monte Carlo simulation methods in the grand canonical ensemble we have studied the behavior of mixed Ar-Kr, Ar-Xe and Kr-Xe monolayer films on the graphite basal plane. We have considered the adsorption of the lighter component, either argon or krypton, under the condition of a fixed chemical potential of the heavier component (krypton or xenon), as well as on the graphite surface with preadsorbed small amounts of a heavier noble gas. In both types of simulation the composition of the adsorbed layer is not conserved. We discuss the phase behavior of mixed films emerging from both types of 'computer experiment'. We also demonstrate that Monte Carlo simulation allows us to estimate the effects of preadsorbed xenon on the commensurate-incommensurate transition in the krypton monolayer film and gives the results that are in good quantitative agreement with experimental data.

  10. Elastic properties of surfactant monolayers at liquid-liquid interfaces: A molecular dynamics study

    DEFF Research Database (Denmark)

    Laradji, Mohamed; Mouritsen, Ole G.

    2000-01-01

    Using a simple molecular model based on the Lennard-Jones potential, we systematically study the elastic properties of liquid-liquid interfaces containing surfactant molecules by means of extensive and large-scale molecular dynamics simulations. The main elastic constants of the interface...

  11. Effect of Dispersion on Surface Interactions of Cobalt(II) Octaethylporphyrin Monolayer on Au(111) and HOPG(0001) Substrates: a Comparative First Principles Study

    Energy Technology Data Exchange (ETDEWEB)

    Chilukuri, Bhaskar; Mazur, Ursula; Hipps, Kerry W.

    2014-07-21

    A density functional theory study of a cobalt(II) octaethylporphyrin (CoOEP) monolayer on Au(111) and HOPG(0001) surfaces was performed under periodic boundary conditions. Calculations with and without dispersion corrections are performed and the effect of van der Waals forces on the interface properties is analyzed. Calculations have determined that the CoOEP molecule tends to bind at the 3-fold and the 6-fold center sites on Au(111) and HOPG(0001), respectively. Geometric optimizations at the center binding sites have indicated that the porphyrin molecules (in the monolayer) lie flat on both substrates. Calculations also reveal that the CoOEP monolayer binds slightly more strongly to Au(111) than to HOPG(0001). Charge density difference plots disclose that charge is redistributed mostly around the porphyrin plane and the first layer of the substrates. Dispersion interactions cause a larger substrate to molecule charge pushback on Au(111) than on HOPG. CoOEP adsorption tends to lower the work functions of either substrate, qualitatively agreeing with the experimental photoelectron spectroscopic data. Comparison of the density of states (DOS) of the isolated CoOEP molecule with that on gold and HOPG substrates showed significant band shifts around the Fermi energy due to intermolecular orbital hybridization. Simulated STM images were plotted with the Tersoff–Hamann approach using the local density of states, which also agree with the experimental results. This study elucidates the role of dispersion for better describing porphyrin–substrate interactions. A DFT based overview of geometric, adsorption and electronic properties of a porphyrin monolayer on conductive surfaces is presented.

  12. Graphic model for calculating the entropy of С11Н24 alkanes with allowance for multiple non-valence interactions through three atoms along the chain of a molecule

    Science.gov (United States)

    Nilov, D. Yu.; Smolyakov, V. M.

    2016-08-01

    A fourteen-constant graphic scheme is proposed for evaluating the thermodynamic properties of branched paraffin hydrocarbons. Absolute entropy S f, 298 gas of 159 alkanes, of which 157 alkanes have yet to be studied experimentally, are calculated using 105 experimental data S f, 298 K, gas for alkanes CН4-С32Н66.

  13. Crumpling deformation regimes of monolayer graphene on substrate: a molecular mechanics study

    International Nuclear Information System (INIS)

    Experiments and simulations demonstrating reversible and repeatable crumpling of graphene warrant a detailed understanding of the underlying mechanisms of graphene crumple formation, especially for design of tailored nanostructures. To systematically study the formation of crumples in graphene, we use a simple molecular dynamics model, and perform a series of simulations to characterize the finite number of deformation regimes of graphene on substrate after compression. We formulate a quantitative measure of predicting these deformations based on observed results of the simulations and distinguish graphene crumpling considered in this study from others. In our study, graphene is placed on a model substrate while controlling and varying the interfacial energy between graphene and substrate and the substrate roughness through a set of particles embedded in the substrate. We find that a critical value of interfacial adhesion energy marks a transition point that separates two deformation regimes of graphene on substrate under uniaxial compression. The interface between graphene and substrate plays a major role in the formation of crumples, and we show that the choice of substrate can help in designing desired topologies in graphene. (paper)

  14. Theoretical model study of dynamic ferromagnetic susceptibility in mono-layer graphene

    Science.gov (United States)

    Sahu, Sivabrata; Parashar, S. K. S.; Rout, G. C.

    2016-04-01

    We report here a microscopic theoretical study of dynamic ferromagnetic spin susceptibility of electrons for graphene systems, which deal with a tight-binding model Hamiltonian consisting of the hopping of electrons up to third-nearest-neighbors, impurity and substrate effects besides Coulomb interaction of electrons at A-and B- sub- lattices. The spin susceptibility involves four two-particle Green's functions, which are calculated by Zubarev's Green's function technique. The up and down electron occupancies at A and B sub-lattices are computed numerically and self-consistently. The temperature dependent susceptibility shows a pronounced peak at Curie temperature for critical Coulomb interaction Uc = 2.2t1.

  15. Experimental Investigation Of Microbially Induced Corrosion Of Test Samples And Effect Of Self-assembled Hydrophobic Monolayers. Exposure Of Test Samples To Continuous Microbial Cultures, Chemical Analysis, And Biochemical Studies

    CERN Document Server

    Laurinavichius, K S

    1998-01-01

    Experimental Investigation Of Microbially Induced Corrosion Of Test Samples And Effect Of Self-assembled Hydrophobic Monolayers. Exposure Of Test Samples To Continuous Microbial Cultures, Chemical Analysis, And Biochemical Studies

  16. Eukaryotic expression system Pichia pastoris affects the lipase catalytic properties: a monolayer study.

    Directory of Open Access Journals (Sweden)

    Madiha Bou Ali

    Full Text Available Recombinant DNA methods are being widely used to express proteins in both prokaryotic and eukaryotic cells for both fundamental and applied research purposes. Expressed protein must be well characterized to be sure that it retains the same properties as the native one, especially when expressed protein will be used in the pharmaceutical field. In this aim, interfacial and kinetic properties of native, untagged recombinant and tagged recombinant forms of a pancreatic lipase were compared using the monomolecular film technique. Turkey pancreatic lipase (TPL was chosen as model. A kinetic study on the dependence of the stereoselectivity of these three forms on the surface pressure was performed using three dicaprin isomers spread in the form of monomolecular films at the air-water interface. The heterologous expression and the N-His-tag extension were found to modify the pressure preference and decrease the catalytic hydrolysis rate of three dicaprin isomers. Besides, the heterologous expression was found to change the TPL regioselectivity without affecting its stereospecificity contrary to the N-tag extension which retained that regioselectivity and changed the stereospecificity at high surface pressures. The study of parameters, termed Recombinant expression Effects on Catalysis (REC, N-Tag Effects on Catalysis (TEC, and N-Tag and Recombinant expression Effects on Catalysis (TREC showed that the heterologous expression effects on the catalytic properties of the TPL were more deleterious than the presence of an N-terminal tag extension.

  17. Scanning tunneling microscopy studies of organic monolayers adsorbed on the rhodium(111) crystal surface

    Energy Technology Data Exchange (ETDEWEB)

    Cernota, Paul D.

    1999-08-01

    Scanning Tunneling Microscopy studies were carried out on ordered overlayers on the (111) surface of rhodium. These adsorbates include carbon monoxide (CO), cyclohexane, cyclohexene, 1,4-cyclohexadiene, para-xylene, and meta-xylene. Coadsorbate systems included: CO with ethylidyne, CO with para- and meta-xylene, and para-xylene with meta-xylene. In the case of CO, the structure of the low coverage (2x2) overlayer has been observed. The symmetry of the unit cell in this layer suggests that the CO is adsorbed in the 3-fold hollow sites. There were also two higher coverage surface structures with ({radical}7x{radical}7) unit cells. One of these is composed of trimers of CO and has three CO molecules in each unit cell. The other structure has an additional CO molecule, making a total of four. This extra CO sits on a top site.

  18. Oxidative dehydrogenation of light alkanes

    Energy Technology Data Exchange (ETDEWEB)

    Meiswinkel, A.; Thaller, C.; Bock, M.; Alvarado, L. [Linde AG, Pullach (Germany); Hartmann, D.; Veen, A.C. van; Lercher, J.A. [Technische Univ. Muenchen (Germany)

    2012-07-01

    The demand of light olefins increases steadily and the current steam cracking production is highly energy demanding. This motivates the development of alternative production processes like the oxidative dehydrogenation (ODH) of light alkanes operating at comparably low temperatures. Multi-component oxides are reported to show excellent catalytic performance in the ODH. Especially, MoVTeNbO oxides present high activity and selectivity in ODH of ethane. Synthesis of MoVTeNb oxides was done by a hydrothermal method. Qualitative and quantitative phase analysis were performed by X-ray diffraction and Rietveld refinement. Surface compositions were determined by Low energy ion scattering (LEIS). Catalytic tests were carried out in a fixed bed plug flow reactor using ethane and oxygen diluted in helium, as gaseous feed. Based on laboratory investigations a first upscale to a bench-top-pilot unit was performed in order to evaluate the large scale and long term feasibility of the process under technically relevant conditions. MoVTeNb oxides show high activity combined with excellent selectivity in the ODH of ethane to ethylene (S > 95% at X < 40%). Phase analysis reveals the presence of M1, M2 and amorphous phases. Literature reports the crystalline M1 phase as essential for the performance. Indeed, the crystalline M1 phase impacts on the activity via exposing V on the surface being apparently vital to achieve an active material. A correlation of the apparent activation energy with the surface vanadium composition of the catalysts is noticed, however, surprisingly with no major impact on the ethene selectivity. As this material was identified as most promising for a technical application a scale up from less than 1g to 50g of catalyst was performed in a bench-top-pilot unit. The reaction has a significant adiabatic temperature rise and the handling of the reaction heat is a major challenge for process engineering. Furthermore different diluent media such as Helium, Nitrogen

  19. The adsorption of CO and NO on the MoS2 monolayer doped with Au, Pt, Pd, or Ni: A first-principles study

    Science.gov (United States)

    Ma, Dongwei; Ju, Weiwei; Li, Tingxian; Zhang, Xiwei; He, Chaozheng; Ma, Benyuan; Lu, Zhansheng; Yang, Zongxian

    2016-10-01

    By performing the first-principles calculation, the adsorption of CO and NO molecules on the Au, Pt, Pd, or Ni doped MoS2 monolayer has been studied. The interaction between CO or NO with the doped MoS2 monolayer is strong and belongs to the chemisorption, as evidenced by the large adsorption energy and the short distance between the adsorbed molecules and the dopants. The charge transfer and the electronic property induced by the molecule adsorption are discussed. It is found that for both CO and NO adsorption, for all the cases charge transfer between the substrates and the adsorbed molecules has been observed. For NO, the adsorption obviously induces new impurity states in the band gap or the redistribution of the original impurity states. These can lead to the change of the transport properties of the doped MoS2 monolayer, by which the adsorbed CO or NO can be detected. The present work shows that introducing appropriate dopants may be a feasible method to improve the performance of MoS2-based gas sensors.

  20. Studies on chemical charge doping related optical properties in monolayer WS2

    Science.gov (United States)

    Rivera, Adriana M.; Gaur, Anand P. S.; Sahoo, Satyaprakash; Katiyar, Ram S.

    2016-09-01

    Thermal stability of quasi particles, i.e., exciton and trion, and a strong particle-particle interaction significantly tune the optical properties of atomically thin two dimensional (2D) metal dichalcogenides. The present work addresses the effect of inherent defects upon optical properties of chemical vapor deposition grown 1 L-WS2 and proposes the use of chemical transfer doping as a reversible and simple method for identification of the type of excess charge in the system. Photoluminescence (PL) studies in pristine 1 L-WS2 show that an additional band at ˜0.06 eV below trion (X±) PL band was evolved (at low temperature) which was associated to the bound exciton with charged/neutral defect. Using 7,7,8,8-Tetracyanoquinodimethane and 2,2-bis1,3-dithiolylidene as p and n-type dopants, respectively, we determined that the inherent defects/metal vacancies, which could be due to the presence of Tungsten metal deficiency, contributed in p-type nature of the pristine 1 L-WS2. Doping of 2D transition metal dichalcogenides materials with organic molecule via the surface charge transfer method is not only a way to provide a handy way to tailor the electronic and optical properties but also can be used as a tool to determine the nature of defects in the material.

  1. Structural prediction for scandium carbide monolayer sheet

    Science.gov (United States)

    Ma, Hong-Man; Wang, Jing; Zhao, Hui-Yan; Zhang, Dong-Bo; Liu, Ying

    2016-09-01

    A two-dimensional tetragonal scandium carbide monolayer sheet has been constructed and studied using density functional theory. The results show that the scandium carbide sheet is stable and exhibits a novel tetracoordinated quasiplanar structure, as favored by the hybridization between Sc-3d orbitals and C-2p orbitals. Calculations of the phonon dispersion as well as molecular dynamics simulations also demonstrate the structural stability of this scandium carbide monolayer sheet. Electronic properties show that the scandium carbide monolayer sheet is metallic and non-magnetic.

  2. Thermodynamics of the adsorption of organic molecules on graphitized carbon black modified with a monolayer of 5-hydroxy-6-methyluracil

    Science.gov (United States)

    Gus'kov, V. Yu.; Ivanov, S. P.; Shaikhitdinova, Yu. F.; Kudasheva, F. Kh.

    2016-10-01

    Thermodynamic characteristics of the adsorption of alkanes, alcohols, arenes, and esters on graphitized carbon black with a deposited monolayer (0.17%) of 5-hydroxy-6-methyluracil are studied by means of inverse gas chromatography at infinite dilution. It is established that size effects (violation of the additivity of molar changes in internal energy and the entropy of adsorption for pairs of molecules of one homologous series that differ by one methyl group) are observed when organic molecules are adsorbed on the surface of the resulting adsorbent. The size effects are similar to those observed when 1% 5-hydroxy-6-methyluracil is deposited on graphitized carbon black. It is concluded that the observed violation of additivity is associated with cavities in the supramolecular structure.

  3. Optimized modification of gold nanoparticles with a self-assembled monolayer for suppression of nonspecific binding in DNA assays

    Science.gov (United States)

    Esashika, Keiko; Saiki, Toshiharu

    2016-10-01

    Homogeneous DNA assays using gold nanoparticles (AuNPs) require the reduction of nonspecific binding between AuNPs to improve sensitivity in detecting the target molecule. In this study, we employed alkanethiol self-assembled monolayers (SAMs) for modifying the AuNP surface to attain both good dispersability and high hybridization efficiency. The alkanethiol SAMs enhance the repulsive interaction between AuNPs, reducing nonspecific binding and promoting the extension of surface-immobilized ssDNA into the solvent, thus enhancing the hybridization process. Introduction of oligoethylene glycol into the alkanethiol prevented nonspecific binding caused by the entanglement of alkane chains. Finally, the conditions were optimized by controlling the surface charge density through the introduction of a COOH group at the alkanethiol terminus, resulting in the complete blocking of nonspecific binding and the maintenance of high hybridization efficiency.

  4. The structure of thin zirconia films obtained by self-assembled monolayer mediated deposition: TEM and HREM study

    OpenAIRE

    Roddatis, V.; Su, D.; Beckmann, E.; Jentoft, F.; Braun, U.; Kröhnert, J.; Schlögl, R.

    2002-01-01

    Transmission electron microscopy (TEM), electron energy-loss spectroscopy (EELS) and energy dispersive X-ray analysis (EDX) have been performed on thin zirconia films produced by means of self-assembled monolayer (SAM) mediated deposition from aqueous zirconium sulphate dispersion at 50°C. As-grown films were found to be amorphous. Electron beam irradiation can induce the crystallization of as-grown amorphous zirconia films to tetragonal polycrystalline ZrO2 films. EELS revealed changes in th...

  5. Molecular organization of antifungal antibiotic amphotericin B in lipid monolayers studied by means of Fluorescence Lifetime Imaging Microscopy

    OpenAIRE

    Gruszecki, Wieslaw I.; Luchowski, Rafał; Gagoś, Mariusz; Arczewska, Marta; Sarkar, Pabak; Hereć, Monika; Myśliwa-Kurdziel, Beata; Strzałka, Kazimierz; Gryczynski, Ignacy; Gryczynski, Zygmunt

    2009-01-01

    Abstract Amphotericin B (AmB) is a life-saving polyene antibiotic used to treat deep-seated mycotic infections. Both the mode of therapeutic action as well as toxic side effects are directly dependent on molecular organization of the drug. Binding of AmB to lipid monolayers formed with dipalmitoylphosphatidylcholine, pure and containing 40 mol% cholesterol or ergosterol, the sterols of human and fungi respectively, has been examined by means of Fluorescence Lifetime Imaging Microsc...

  6. Scanning probe microscopies for the creation and characterization of interfacial architectures: Studies of alkyl thiolate monolayers at gold

    Energy Technology Data Exchange (ETDEWEB)

    Green, J.

    1997-01-10

    Scanning probe microscopy (SPM) offers access to the structural and material properties of interfaces, and when combined with macroscopic characterization techniques results in a powerful interfacial development tool. However, the relative infancy of SPM techniques has dictated that initial investigations concentrate on model interfacial systems as benchmarks for testing the control and characterization capabilities of SPM. One such family of model interfacial systems results from the spontaneous adsorption of alkyl thiols to gold. This dissertation examines the application of SPM to the investigation of the interfacial properties of these alkyl thiolate monolayers. Structural investigations result in a proposed explanation for counterintuitive correlations between substrate roughness and heterogeneous electron transfer barrier properties. Frictional measurements are used for characterization of the surface free energy of a series of end-group functionalized monolayers, as well as for the material properties of monolayers composed of varying chain length alkyl thiols. Additional investigations used these characterization techniques to monitor the real-time evolution of chemical and electrochemical surface reactions. The results of these investigations demonstrates the value of SPM technology to the compositional mapping of surfaces, elucidation of interfacial defects, creation of molecularly sized chemically heterogeneous architectures, as well as to the monitoring of surface reactions. However, it is the future which will demonstrate the usefulness of SPM technology to the advancement of science and technology.

  7. Diamondoid monolayers as electron emitters

    Science.gov (United States)

    Yang, Wanli; Fabbri, Jason D.; Melosh, Nicholas A.; Hussain, Zahid; Shen, Zhi-Xun

    2012-04-10

    Provided are electron emitters based upon diamondoid monolayers, preferably self-assembled higher diamondoid monolayers. High intensity electron emission has been demonstrated employing such diamondoid monolayers, particularly when the monolayers are comprised of higher diamondoids. The application of such diamondoid monolayers can alter the band structure of substrates, as well as emit monochromatic electrons, and the high intensity electron emissions can also greatly improve the efficiency of field-effect electron emitters as applied to industrial and commercial applications.

  8. Transport mechanisms and wetting dynamics in molecularly thin films of long-chain alkanes at solid/vapour interface : relation to the solid-liquid phase transition

    OpenAIRE

    Lazar, Paul

    2005-01-01

    Wetting and phase transitions play a very important role our daily life. Molecularly thin films of long-chain alkanes at solid/vapour interfaces (e.g. C30H62 on silicon wafers) are very good model systems for studying the relation between wetting behaviour and (bulk) phase transitions. Immediately above the bulk melting temperature the alkanes wet partially the surface (drops). In this temperature range the substrate surface is covered with a molecularly thin ordered, solid-like alkane film (...

  9. Alkane dehydrogenation over supported chromium oxide catalysts

    NARCIS (Netherlands)

    Weckhuysen, B.M.; Schoonheydt, R.A.

    1999-01-01

    The dehydrogenation of alkanes over supported chromium oxide catalysts in the absence of oxygen is of high interest for the industrial production of propene and isobutene. In this review, a critical overview is given of the current knowledge nowadays available about chromium-based dehydrogenation ca

  10. Squeeze-Out of Branched Alkanes on Graphite

    Science.gov (United States)

    Gosvami, N. N.; Sinha, S. K.; O'Shea, S. J.

    2008-02-01

    We study squalane and heptamethylnonane (HMN) confined between a conducting atomic force microscope tip and a graphite surface. Solvation layering occurs for both liquids but marked differences in the squeeze out mechanics are observed for ordered or disordered monolayers. The squalane monolayer at 25°C is an ordered solid, as verified by direct imaging, and the squeeze out can be modeled using elastic continuum mechanics. HMN is in a disordered state at 25°C and cannot be modeled as a single elastic asperity even in solid-solid contact because HMN liquid is trapped in the contact zone.

  11. Characterization of n-alkanes in PM{sub 2.5} of the Taipei aerosol

    Energy Technology Data Exchange (ETDEWEB)

    Young, Li Hao [National Taiwan Univ., Taipei (Taiwan). Graduate Inst. of Environmental Health; Wang, Chiu Sen [National Taiwan Univ., Taipei (Taiwan). Dept. of Public Health

    2002-07-01

    Ambient concentrations of n-alkanes with carbon number ranging from 17 to 36 were determined for PM{sub 2.5} collected in Taipei city during September 1997-February 1998. The measured concentrations of particulate n-alkanes were in the range of 69-702ngm{sup -3} considerably higher than the concentration levels observed in Los Angeles and Hong Kong. The concentration distributions of n-alkanes homologues obtained in this study exhibited peaks at C{sub 19}, C{sub 24} or C{sub 25}. This suggests that fossil fuel utilization, such as vehicular exhaust and lubricant residues, was an important contributor to the Taipei aerosol. Source apportionment of PM{sub 2.5} was conducted using carbon preference index (CPI, defined as the ratio of the total concentration of particulate n-alkanes with odd carbon number to that with even carbon number) and U:R ratio (the concentration ratio of unresolved components to resolved components obtained from chromatograms). The low CPI value (0.9-1.9) and high U:R ratio (2.6-6.4) for each sample further confirmed that fossil fuel utilization was the major source of n-alkanes in ambient PM{sub 2.5} of Taipei city. Estimates from these results showed that 69-93% of the n-alkanes in PM{sub 2.5} of the Taipei aerosol originated from vehicular exhaust. The higher concentration level of particulate n-alkanes in the Taipei aerosol was mainly a result of vehicular emissions. (author)

  12. The anaerobic degradation of gaseous, nonmethane alkanes — From in situ processes to microorganisms

    Directory of Open Access Journals (Sweden)

    Florin Musat

    2015-01-01

    Full Text Available The short chain, gaseous alkanes ethane, propane, n- and iso-butane are released in significant amounts into the atmosphere, where they contribute to tropospheric chemistry and ozone formation. Biodegradation of gaseous alkanes by aerobic microorganisms, mostly bacteria and fungi isolated from terrestrial environments, has been known for several decades. The first indications for short chain alkane anaerobic degradation were provided by geochemical studies of deep-sea environments around hydrocarbon seeps, and included the uncoupling of the sulfate-reduction and anaerobic oxidation of methane rates, the consumption of gaseous alkanes in anoxic sediments, or the enrichment in 13C of gases in interstitial water vs. the source gas. Microorganisms able to degrade gaseous alkanes were recently obtained from deep-sea and terrestrial sediments around hydrocarbon seeps. Up to date, only sulfate-reducing pure or enriched cultures with ethane, propane and n-butane have been reported. The only pure culture presently available, strain BuS5, is affiliated to the Desulfosarcina–Desulfococcus cluster of the Deltaproteobacteria. Other phylotypes involved in gaseous alkane degradation have been identified based on stable-isotope labeling and whole-cell hybridization. Under anoxic conditions, propane and n-butane are activated similar to the higher alkanes, by homolytic cleavage of the CH bond of a subterminal carbon atom, and addition of the ensuing radical to fumarate, yielding methylalkylsuccinates. An additional mechanism of activation at the terminal carbon atoms was demonstrated for propane, which could in principle be employed also for the activation of ethane.

  13. Molecular Arrangement in Self-Assembled Azobenzene-Containing Thiol Monolayers at the Individual Domain Level Studied through Polarized Near-Field Raman Spectroscopy

    Directory of Open Access Journals (Sweden)

    Razvigor Ossikovski

    2011-02-01

    Full Text Available 6-[4-(phenylazophenoxy]hexane-1-thiol self-assembled monolayers deposited on a gold surface form domain-like structures possessing a high degree of order with virtually all the molecules being identically oriented with respect to the surface plane. We show that, by using polarized near-field Raman spectroscopy, it is possible to derive the Raman scattering tensor of the ordered layer and consequently, the in-plane molecular orientation at the individual domain level. More generally, this study extends the application domain of the near-field Raman scattering selection rules from crystals to ordered organic structures.

  14. The most stable mono-layers of (111)-Pt (fcc) on Graphene: A first-principles GGA study

    Science.gov (United States)

    Otalora-Acevedo, J.; Rodríguez Martínez, J. A.; Moreno-Armenta, G.; Vera, E.; Takeuchi Tan, N.

    2016-08-01

    We investigate monolayers of planes (111) of Pt in the FCC structure located on graphene. The energy of formation showed that the most stable structure is √3×√3 — Pt on 2 × 2 — graphene. This system has a mismatch in the lattice constant of 0.45. The layers are completely flat, and its band structure shows that the new structure is metallic and the Dirac's cones are displaced 0.6eV above of the Fermi level. In this work we present the dependence of the enthalpy of formation of these structures and we calculated all structural parameters of their relaxation.

  15. Use of enzyme label for quantitative evaluation of liposome adhesion on cell surface: studies with J774 macrophage monolayers.

    Science.gov (United States)

    Trubetskoy, V S; Dormeneva, E V; Tsibulsky, V P; Repin, V S; Torchilin, V P

    1988-07-01

    A method for quantitation of cell surface-bound liposomes utilizing J774 macrophage monolayers is developed. Surface-bound biotinyl-containing and 125I-labeled liposomes were quantified with avidin-peroxidase in an ELISA-like assay. Peroxidase substrate absorbance values were recalculated into the absolute amount of liposomal lipid using a special calibration plot. Total liposome uptake by macrophages was determined following the binding of 125I radioactivity. The approach suggested allows quantitative evaluation of the changes in the content of surface-adhered liposomes during their interaction with cells in vitro.

  16. Self-assembled monolayers of radical molecules physisorbed on HOPG(0 0 0 1) substrate studied by scanning tunnelling microscopy and electron paramagnetic resonance techniques

    International Nuclear Information System (INIS)

    In this paper, we present a combined STM and EPR study on the adsorption and self-organization of monolayers formed from 2-(14-Carboxytetradecyl)-2-ethyl-4,4-dimethyl-3-oxazolidinyloxy (16DS) and 4',4'-Dimethylspiro(5α-cholestane-3,2'-oxazolidin)-3'-yloxy (CSL) adsorbed on a highly oriented pyrolitic graphite HOPG(0 0 0 1) substrate. Both 16DS and CSL molecules are persistent free radicals containing a paramagnetic doxyl group. The STM measurements of 16DS on HOPG(0 0 0 1) were performed at the liquid-solid interface while the studies of CSL on HOPG(0 0 0 1) were carried out under ultrahigh vacuum conditions. It was found that the 16DS molecules on the HOPG(0 0 0 1) surface form a highly-ordered monolayer with a domain structure. The high-resolution STM images show structural details of 16DS molecules on HOPG(0 0 0 1) revealing the paramagnetic doxyl group. In contrast, CSL molecules on HOPG(0 0 0 1) form a well-ordered monolayer without domain structure. The EPR results indicate that both compounds deposited on HOPG(0 0 0 1) substrate are not reduced and retain their paramagnetic character. We believe that the molecular systems described can be used in single spin detection experiments using an electron spin noise-scanning tunnelling microscopy (ESN-STM) technique. In particular, the possibility of obtaining contrast spin signals from the paramagnetic and diamagnetic parts of molecules increases the significance of our results.

  17. Hydrogen isotopic compositions and their environmental significance for individual n-alkanes in typical plants from land in China

    Institute of Scientific and Technical Information of China (English)

    DUAN Yi; WU BaoXiang

    2009-01-01

    Hydrogen isotopes of n-alkanes in grasses, tree leaves and reeds from six regions with latitudes of 20° to 39°N in China are measured by GC-TC-IRMS analytical technique in order to understand their hy-drogen isotopic compositions and environmental significance. The results show that a difference in δD values (from -42.1‰ to -66.6‰) of n-alkanes exists among the same kinds of plants from various re-gions. Hydrogen isotopic compositions of most even carbon numbered n-alkanes in every plant are slightly heavier than that of the odd homologues. A trend toward D-enrichment with increasing chain length of n-alkanes in most plant samples is observed. Mean δD values of n-alkanes in the studied plants range from -202.6‰ to -130.7‰ and the reed from a salt marsh has the largest value. The mean δD values of individual n-alkanes among the same kinds of plants from various regions have the characteristics of leaf > reed > grass. The hydrogen isotopic compositions of n-alkanes are apparently distinct among various kinds of plants from the same region and the mean δD values exhibit a distri-bution of tree leaf > reed > grass. It is observed that the mean δD values of n-alkanes and δD values of C27 and C29 n-alkanes in the grasses and tree leaves from these studied regions correlate clearly nega-tively with latitude and positively with temperature, indicating that these values can be used as excel-lent indicators of environment and climate. These results provide important basic data for under-standing the distributional law of hydrogen isotopes of individual n-aikanes and their applied research.

  18. Use of Self-Assembling Monolayers to Control Interface Bonding in a Model Study of Interfacial Fracture

    Energy Technology Data Exchange (ETDEWEB)

    Kent, M.S.; Matheson, A.; Reedy, E.D.; Yim, H.

    1999-03-05

    The relationships between the extent of interfacial bonding, energy dissipation mechanisms, and fracture toughness in a glassy adhesive/inorganic solid joint are not well understood. We address this subject with a model system involving an epoxy adhesive on a polished silicon wafer containing its native oxide. The extent of interfacial bonding, and the wetting behavior of the epoxy, is varied continuously using self-assembling monolayers (SAMs) of octadecyltrichlorosilane (ODTS). The epoxy interacts strongly with the bare silicon oxide surface, but forms only a very weak interface with the methylated tails of the ODTS monolayer. We examine the fracture behavior of such joints as a function of the coverage of ODTS in the napkin-ring geometry. Various characterization methods are applied to the ODTS-coated surface before application of the epoxy, and to both surfaces after fracture. The fracture data are discussed with respect to the wetting of the liquid epoxy on the ODTS-coated substrates, the locus of failure, and the energy dissipation mechanisms. Our goal is to understand how energy is dissipated during fracture as a function of interface strength.

  19. Kinetic studies of attachment and re-orientation of octyltriethoxysilane for formation of self-assembled monolayer on a silica substrate.

    Science.gov (United States)

    Hasan, Abshar; Pandey, Lalit M

    2016-11-01

    The present study deals with kinetic studies of the chemical modification for synthesizing a hydrophobic silica surface. Surface silanization (modification) via formation of Self-Assembled Monolayer (SAM) using a short chain triethoxyoctylsilane (TEOS) was carried out under inert atmosphere at room temperature. Fourier transmission infrared (FTIR) spectroscopy, water contact angle (WCA) and atomic force microscopy (AFM) were employed to investigate surface modification. FTIR analysis in the range from 900-1200cm(-1) and 2850-3000cm(-1) confirmed surface modification and re-orientation of the attached molecules. Kinetic studies of TEOS SAM formation were fitted by Exponential Association function. Kinetic fitting of FTIR data in the range from 900-1200cm(-1) revealed a very fast attachment of TEOS molecules resulting in total surface coverage within 16min whereas re-orientation rate was slow and continued till 512min. Further, change in orientation from lying-down to standing-up state was supported by contact angle analysis. AFM images initially showed small islands of ~20nm, which in-fill with time indicating formation of a smooth monolayer. Our findings indicate that formation of octyl SAM is fast process and completes within 8.5h in contrary to reported 24h in conventional SAM formation protocols. The kinetic fitting data can be explored to design a nanopatterned surface for a specific application. PMID:27524037

  20. n-Alkane distributions as indicators of novel ecosystem development in western boreal forest soils

    Science.gov (United States)

    Norris, Charlotte; Dungait, Jennifer; Quideau, Sylvie

    2013-04-01

    Novel ecosystem development is occurring within the western boreal forest of Canada due to land reclamation following surface mining in the Athabasca Oil Sands Region. Sphagnum peat is the primary organic matter amendment used to reconstruct soils in the novel ecosystems. We hypothesised that ecosystem recovery would be indicated by an increasing similarity in the biomolecular characteristics of novel reconstructed soil organic matter (SOM) derived from peat to those of natural boreal ecosystems. In this study, we evaluated the use of the homologous series of very long chain (>C20) n-alkanes with odd-over-even predominance as biomarker signatures to monitor the re-establishment of boreal forests on reconstructed soils. The lipids were extracted from dominant vegetation inputs and SOM from a series of natural and novel ecosystem reference plots. We observed unique very long n-alkane signatures of the source vegetation, e.g. Sphagnum sp. was dominated by C31 and aspen (Populus tremuloides Michx.) leaves by C25. Greater concentrations of very long chain n-alkanes were extracted from natural than novel ecosystem SOM (p<0.01), and their distribution differed between the two systems (p<0.001) and reflected the dominant vegetation input. Our results indicate that further research is required to clarify the influence of vegetation or disturbance on the signature of very long chain n-alkanes in SOM; however, the use of n-alkanes as biomarkers of ecosystem development is a promising method.

  1. The synergetic effect of starch and alpha amylase on the biodegradation of n-alkanes.

    Science.gov (United States)

    Karimi, M; Biria, D

    2016-06-01

    The impact of adding soluble starch on biodegradation of n-alkanes (C10-C14) by Bacillus subtilis TB1 was investigated. Gas chromatography was employed to measure the residual hydrocarbons in the system. It was observed that the efficiency of biodegradation improved with the presence of starch and the obtained residual hydrocarbons in the system were 53% less than the samples without starch. The produced bacterial enzymes were studied through electrophoresis and reverse zymography for explaining the observations. The results indicated that the produced amylase by the bacteria can degrade hydrocarbons and the same was obtained by the application of a commercial alpha amylase sample. In addition, in silico docking of alpha-amylase with n-alkanes with different molecular weights was studied by Molegro virtual docker which showed high negative binding energies and further substantiated the experimental observations. Overall, the findings confirmed the catalytic effect of alpha amylase on n-alkanes degradation. PMID:26971168

  2. Zitterbewegung in monolayer silicene in a magnetic field

    Energy Technology Data Exchange (ETDEWEB)

    Romera, E. [Departamento de Física Atómica, Molecular y Nuclear and Instituto Carlos I de Física Teórica y Computacional, Universidad de Granada, Fuentenueva s/n, 18071 Granada (Spain); Roldán, J.B. [Departamento de Electrónica y Tecnología de Computadores and CITIC, Universidad de Granada, Fuentenueva s/n, 18071 Granada (Spain); Santos, F. de los [Departamento de Electromagnetismo y Física de la Materia, and Instituto Carlos I de Física Teórica y Computacional, Universidad de Granada, Fuentenueva s/n, 18071 Granada (Spain)

    2014-07-04

    We study the Zitterbewegung in monolayer silicene under a perpendicular magnetic field. Using an effective Hamiltonian, we have investigated the autocorrelation function and the density currents in this material. Moreover, we have analyzed other types of periodicities of the system (classical and revival times). Finally, the above results are compared with their counterparts in two other monolayer materials subject to a magnetic field: graphene and MoS{sub 2}. - Highlights: • We study Zitterbewegung in monolayer silicene in a magnetic field. • We have analyzed other types of periodicities in silicene. • The above results are compared with other monolayer materials (graphene and MoS{sub 2})

  3. Large perpendicular magnetic anisotropy of single Co atom on MgO monolayer: A first-principles study

    Energy Technology Data Exchange (ETDEWEB)

    Shao, Bin; Shi, Wu-Jun [Department of Physics and State Key Laboratory of Low-Dimensional Quantum Physics, Tsinghua University, Beijing 100084 (China); Feng, Min [School of Physics, Nankai University, Tianjin 300071 (China); Zuo, Xu, E-mail: xzuo@nankai.edu.cn [College of Electronic Information and Optical Engineering, Nankai University, Tianjin 300071 (China)

    2015-05-07

    Realizing the magnetic bit with a single atom is the ultimate goal for magnetic storage. Based on density functional theory, the magnetic anisotropy (MA) of single Co atom on MgO monolayer has been investigated. Results show that this two dimensional system possesses a large perpendicular MA, about 5.8 meV per Co atom. Besides, there exists remarkable unquenched orbital moments for different magnetization directions, which can be attributed to the reduction of coordination number in two dimensional system and is responsible for the enhanced MA. The Bloch pseudo-wavefunction and band structure of Co d-orbitals have been calculated to elucidate the origin of the perpendicular MA.

  4. Magnetism and magnetocrystalline anisotropy of 3dtransition metal monolayers on Pt(001): a density-functional study.

    Science.gov (United States)

    Taivansaikhan, P; Odkhuu, D; Kwon, O R; Tsogbadrakh, N; Hong, S C

    2014-12-01

    We systematically investigate the effects of having Pt as a substrate and/or capping layer on the magnetism and magnetocrystalline anisotropy (MCA) of 3d transition metal (TMs; Cr, Mn, Fe, and Co) monolayers (MLs) by using a first-principles calculationl method. We found that Fe and Co MLs are ferromagnetic (FM) on a Pt(001) surface, but Mn and Cr MLs are antiferromagnetic (AFM). The magnetic moments are quite robust with additional Pt-capping. Furthermore, Pt-capping enhances the small perpendicular MCA (meV) of Fe/Pt(001) significantly to 4.44 meV. Our electronic structure analyses indicate that strong hybridization between Pt-5d and TM-3d orbitals plays a crucial role in determining magnetic ordering and MCA. For comparison we also calculated magnetism and MCA of 3d TM MLs on Ta(001) with and without Ta-capping.

  5. A study on oxygen reduction inhibition at pyridine-terminated self assembled monolayer modified Au(111) electrodes

    Energy Technology Data Exchange (ETDEWEB)

    Muglali, Mutlu Iskender; Bashir, Asif; Rohwerder, Michael [Max-Planck-Institut fuer Eisenforschung GmbH, Duesseldorf (Germany)

    2010-04-15

    The electroreduction of oxygen on self-assembled monolayers (SAMs) of various pyridinedisulfides and pyridinethiols on Au(111) surfaces has been investigated in alkaline solutions. Electrochemical experiments that were carried out in three-electrode cell reveal a good correlation between the chain-length of thiol molecules and the oxygen reduction inhibition of the resulting adlayer films. The effect of retarded diffusion of oxygen through the protective film has been investigated by forming additional layer of immobilized cytochrome c (cyt.c) metalloprotein on pyridine moiety during linear sweep voltammetry (LSV) scans. At sufficiently negative cathodic potentials the electrochemical reaction rate has been observed to increase together with the density of defects. Morphological changes at different levels of cathodic polarization were investigated by ex situ scanning tunneling microscopy (STM), indicating oxygen reduction reaction (ORR) induced structural defects at the metallorganic interface. (Abstract Copyright [2010], Wiley Periodicals, Inc.)

  6. Studies of the epitaxial monolayer NbSe2 by ultra-low-temperature scanning tunnelling microscope

    Science.gov (United States)

    Ji, Shuai-Hua

    Monolayer NbSe2 has been successfully synthesized by molecular beam epitaxy on the graphitized SiC(0001) surface. Wide substrate temperature window from 200°C to 650°C for the epitaxial growth has been observed. The polycrystalline nature of the epitaxial sheet, which is caused by the weak Van der Waals interaction with substrate, has been evidenced by reflection high-energy electron diffraction and locally by scanning tunnelling microscope. Under the high temperature growth condition, grain size could reach as large as hundreds of nanometers. The shape of grain boundary is strongly depended on the misaligned angle between adjacent grains. Mainly, three type grain boundaries have been identified at the atomic scale by the local scanning probe. The BCS-like superconducting gap and the spatial fluctuation of order parameter have been revealed by ultra-low temperature scanning tunnelling microscope in the sub-Kelvin range.

  7. Effects of Odd–Even Side Chain Length of Alkyl-Substituted Diphenylbithiophenes on First Monolayer Thin Film Packing Structure

    KAUST Repository

    Akkerman, Hylke B.

    2013-07-31

    Because of their preferential two-dimensional layer-by-layer growth in thin films, 5,5′bis(4-alkylphenyl)-2,2′-bithiophenes (P2TPs) are model compounds for studying the effects of systematic chemical structure variations on thin-film structure and morphology, which in turn, impact the charge transport in organic field-effect transistors. For the first time, we observed, by grazing incidence X-ray diffraction (GIXD), a strong change in molecular tilt angle in a monolayer of P2TP, depending on whether the alkyl chain on the P2TP molecules was of odd or even length. The monolayers were deposited on densely packed ultrasmooth self-assembled alkane silane modified SiO2 surfaces. Our work shows that a subtle change in molecular structure can have a significant impact on the molecular packing structure in thin film, which in turn, will have a strong impact on charge transport of organic semiconductors. This was verified by quantum-chemical calculations that predict a corresponding odd-even effect in the strength of the intermolecular electronic coupling. © 2013 American Chemical Society.

  8. RNAi silencing of a cytochrome P450 monooxygenase disrupts the ability of a filamentous fungus, Graphium sp. to grow on short-chain gaseous alkanes and ethers

    Science.gov (United States)

    Graphium sp. (ATCC 58400), a filamentous fungus, is one of the few eukaryotes that grows on short-chain alkanes and ethers. In this study, we investigated the genetic underpinnings that enable this fungus to catalyze the first step in the alkane and ether oxidation pathway. A gene, CYP52L1, was iden...

  9. Nucleation, growth and habit modification of n-alkanes and homologous mixtures in the absence and presence of flow improving additives

    CERN Document Server

    Taggart, A M

    1996-01-01

    A detailed study has been performed on the nucleation, growth and habit modification of n-alkanes and homologous mixtures in the absence and presence of flow improving additives in an attempt to gain a clearer appreciation of the interaction mechanisms behind wax / additive crystallisation. Kinetic and structural assessment of melt phase n-alkanes illustrate the different crystallographic forms present within the homologous series. Studies demonstrate the alternating behaviour of the even and odd numbered homologues which converges as a function of increasing molecular weight. Greater crystal lattice stabilities were found for those n-alkanes which have an even carbon number and which crystallise into the triclinic crystal structure. Solid state phase behaviour of the n-alkanes was found to vary depending on the number and parity of n. Nucleation kinetic studies of n-alkanes and homologous mixtures from model diesel fuel solvents (dodecane, m-xylene, decalin, pristane and a dewaxed fuel) are assessed using tu...

  10. Phase-Specific Diffusivity of DPPG Monolayers

    Science.gov (United States)

    Dewitt, Joel; Thapa, Prem; Flanders, Bret

    2004-03-01

    The primary role of lung surfactant is to reduce the alveolar surface tension during exhalation in a reversible manner. Failure to do so results in respiratory distress syndrome. Model lung surfactants provide simplified systems for studying the mechanisms that underlie this essential role of alveolar surfactant. Dipalmitoyl-phosphatidylglycerol (DPPG) monolayers exhibit reversible folding when compressed to a critical surface tension. This process may exemplify how the compression-expansion cycle attains reversibility and, thus, requires penetrating study. The buckling theory for reversible collapse provides a promising though untested description of this process, but poor knowledge of domain boundary widths in DPPG monolayers impedes the evaluation of this theory as a model for the observed behavior. In turn, the measurement of the domain boundary widths requires knowledge of the phase-specific viscosities of the monolayer. In this study, multi-particle tracking has been used to determine the phase-specific diffusion coefficients of polystyrene spheres embedded in DPPG monolayers. By invoking a Stokes-Einstein relationship that is appropriate for spheres diffusing in a viscous surfactant, the phase specific viscosities of the monolayers have been estimated. The rationale for this work is that this knowledge will promote the quantitative evaluation of buckling as a model for reversible folding and, thus, promote growth in understanding of the folding mechanism in model lung surfactants.

  11. Homolytic Bond Dissociation Enthalpies of C C and C-H Bonds in Highly Crowded Alkanes

    Institute of Scientific and Technical Information of China (English)

    ZHU Chen; RUI Lei; FU Yao

    2008-01-01

    The homolytic C-C and C--H bond dissociation enthalpyies (BDE) of highly crowded alkanes were calcu- lated by using an ONIOM-G3B3 method. Geometric parameters such as bond length, bond angle and molecular volume were carefully investigated, as most of the acyclic alkanes in this study were not yet synthesized. These pa-rameters reflect the influence of steric effect on BDE. Good correlations were found between the rapid decrease of BDE and the increase of molecular volumes. The correlations can be applied to the prediction of the possible exis-tence of many highly strained compounds.

  12. Measurement and modelling of hydrogen bonding in 1-alkanol plus n-alkane binary mixtures

    DEFF Research Database (Denmark)

    von Solms, Nicolas; Jensen, Lars; Kofod, Jonas L.;

    2007-01-01

    Two equations of state (simplified PC-SAFT and CPA) are used to predict the monomer fraction of 1-alkanols in binary mixtures with n-alkanes. It is found that the choice of parameters and association schemes significantly affects the ability of a model to predict hydrogen bonding in mixtures, even...... studies, which is clarified in the present work. New hydrogen bonding data based on infrared spectroscopy are reported for seven binary mixtures of alcohols and alkanes. (C) 2007 Elsevier B.V. All rights reserved....

  13. n-Alkane biosynthetic hydrogen isotope fractionation is not constant throughout the growing season in the riparian tree Salix viminalis

    Science.gov (United States)

    Newberry, Sarah L.; Kahmen, Ansgar; Dennis, Paul; Grant, Alastair

    2015-09-01

    Compound-specific δ2H values of leaf wax n-alkanes have emerged as a potentially powerful paleohydrological proxy. Research suggests terrestrial plant n-alkane δ2H values are strongly correlated with meteoric water δ2H values, and may provide information on temperature, relative humidity, evaporation, and precipitation. This is based upon several assumptions, including that biosynthetic fractionation of n-alkanes during synthesis is constant within a single species. Here we present a multi-isotope study of the n-alkanes of riparian Salix viminalis growing in Norwich, UK. We measured n-alkane δ2H, leaf water δ2H, xylem water δ2H, and bulk foliar δ13C and evaluated the variability of n-alkane δ2H values and net biosynthetic fractionation (εlw-wax) over a whole growing season. S. viminalis n-alkane δ2H values decreased by 40‰ between the start of the growing season in April and the time when they stabilized in July. Variation in leaf and xylem water δ2H did not explain this variability. εlw-wax varied from -116‰ during leaf expansion in April to -156‰ during the stable phase. This suggests that differential biosynthetic fractionation was responsible for the strong seasonal trends in S. viminalis n-alkane δ2H values. We suggest that variability in εlw-wax is driven by seasonal differences in the carbohydrate source and thus the NADPH used in n-alkane biosynthesis, with stored carbohydrates utilized during spring and recent occurring growing season assimilates used later in the season. This is further supported by bulk foliar δ13C values, which are 13C-enriched during the period of leaf flush, relative to the end of the growing season. Our results challenge the assumption that biosynthetic fractionation is constant for a given species, and suggest that 2H-enriched stored assimilates are an important source for n-alkane biosynthesis early in the growing season. These findings have implications for the interpretation of sedimentary n-alkanes and call

  14. Structure and Mass Transport Characteristics at the Intrinsic Liquid-Vapor Interfaces of Alkanes.

    Science.gov (United States)

    Chilukoti, Hari Krishna; Kikugawa, Gota; Ohara, Taku

    2016-07-28

    In this paper, an instantaneous interface definition has been used to study the intrinsic structure and self-diffusion coefficient in the vicinity of the liquid-vapor interfaces of decane and tetracosane at three different temperatures using molecular dynamics simulations, and the results have been compared with those obtained on the basis of the conventional Gibbs dividing surface (time- and space-averaged interface). The alkane molecules were modeled using the united atom NERD force field. Partial layered structures of alkane molecules at the liquid-vapor interface are observed as a pinned structure of alkane liquids based on the intrinsic interface. This kind of characteristic has not been observed in the density profiles obtained based on the Gibbs dividing surface. By examining the orientation order parameter and radius of gyration of the alkane molecules, it was observed that the alkane molecules were preferentially oriented to be more parallel to the intrinsic interface than to the Gibbs dividing surface, and the shape of the alkane molecules is slightly changed in the vicinity of the liquid-vapor interfaces. The self-diffusion coefficient parallel to the intrinsic interface was examined using the Green-Kubo relation, where the projection of the velocity in the parallel direction to the local intrinsic interface is used in the velocity correlation function. It was found that the self-diffusion coefficient in the direction parallel to the intrinsic interface changes as the position approaches the interface in a more obvious manner as compared with the self-diffusion coefficient obtained with respect to the Gibbs dividing surface. These results suggest that the use of an instantaneous interface definition allowed us to capture sharp variations in transport properties which are originating due to steeper structure at the liquid-vapor interfaces.

  15. Molecular Diffusive Motion in a Monolayer of a Model Lubricant

    Science.gov (United States)

    Diama, A.; Criswell, L.; Mo, H.; Taub, H.; Herwig, K. W.; Hansen, F. Y.; Volkmann, U. G.; Dimeo, R.; Neumann, D.

    2003-03-01

    Squalane (C_30H_62), a branched alkane of intermediate length consisting of a tetracosane backbone (n-C_24H_50 or C24) and six symmetrically placed methyl sidegroups, is frequently taken as a model lubricant. We have conducted quasielastic neutron scattering (QNS) experiments to investigate the diffusive motion on different time scales in a squalane monolayer adsorbed on the (0001) surfaces of an exfoliated graphite substrate. Unlike tetracosane, high-energy resolution spectra (time scale ˜0.1 - 4 ns) at temperatures of 215 K and 230 K show the energy width of the QNS to have a maximum near Q = 1.2 ÅThis nonmonotonic Q dependence suggests a more complicated diffusive motion than the simple rotation about the long molecular axis believed to occur in a C24 monolayer at this temperature. Lower-energy-resolution spectra (time scale ˜4 - 40 ps) show evidence of two types of diffusive motion whose rates have opposite temperature dependences. The rate of the faster motion decreases as the monolayer is heated, and we speculate that it is due to hindered rotation of the methyl groups. The rate of the slower motion increases with temperature and may involve both uniaxial rotation and translational diffusion. Our experimental results will be compared with molecular dynamics simulations.

  16. Study of the selective abstration reaction of the hydrogen atom in the radiolysis and photolysis of alkane mixture at 77 K

    International Nuclear Information System (INIS)

    The occurence of the selective abstraction reaction of the solute hydrogen atom by hydrogen atom produced during radiolysis or photolysis of the systems such as neopentane/cyclo-hexane/HI, neopentane/2,3 dimethylbutane, n-pentane/HI/cyclo-hexane and cyclo-hexane/HI/n-pentane, at 77 K is studied. Experiments have been undertaken on the kinetics nature of the active species, the H atom, during radiolysis and photolysis of the neopentane/cyclo-hexane/HI system at 77 K, presenting competitive reactions. Studies have also been made on the occurrence of the selective abstraction reaction in inverted systems, in which the concentrations of the components of a system are so much altered that the solute becomes the solvent and vice-versa, in the other system. By means of photolysis at 77 K, it has been observed that for the two systems constitued by the cyclo-hexane and n-pentane the selective abstraction reaction occurs. However, for radiolysis of that same two systems it has been observed that only the hydrogen atom abstraction reaction corresponding to the solvent occurs. (Author)

  17. Metal dependent motif transition in a self-assembled monolayer of bipyridine derivatives via coordination: An STM study

    Science.gov (United States)

    Wang, Yi; Yuan, Qunhui; Xu, Hongbo; Zhu, Xuefeng; Gan, Wei

    2016-07-01

    Low-dimensional molecular motifs with diversity developed via the on-surface chemistry are attracting growing interest for their potential in advanced nanofabrication. In this work, scanning tunneling microscopy was employed to investigate the in situ and ex situ metal coordinations between 4,4'-ditetradecyl-2,2'-bipyridine (bpy) and Zn(ii) or Cu(ii) ions at a highly oriented pyrolytic graphite (HOPG)/1-phenyloctane interface under ambient conditions. The results demonstrate that the bpy adopts a flat-lying orientation with its substituted alkyl chains in a tail-to-tail arrangement in a bpy monolayer. For the in situ coordination, the bpy/Zn(ii) and bpy/Cu(ii) complexes are aligned in edge-on fashions, wherein the bpy stands vertically on the HOPG surface and interdigitates at the alkyl chains. In the two-dimensional arrays of ex situ coordinated complexes, metal dependent motifs have been observed with Zn(ii) and Cu(ii), wherein the bipyridine moieties are parallel to the graphite surface. These results suggest that the desired on-surface coordination architectures may be achieved by the intentional selection of the metal centers.

  18. Nonradiative Electron--Hole Recombination Rate Is Greatly Reduced by Defects in Monolayer Black Phosphorus: Ab Initio Time Domain Study.

    Science.gov (United States)

    Long, Run; Fang, Weihai; Akimov, Alexey V

    2016-02-18

    We report ab initio time-domain simulations of nonradiative electron-hole recombination and electronic dephasing in ideal and defect-containing monolayer black phosphorus (MBP). Our calculations predict that the presence of phosphorus divacancy in MBP (MBP-DV) substantially reduces the nonradiative recombination rate, with time scales on the order of 1.57 ns. The luminescence line width in ideal MBP of 150 meV is 2.5 times larger than MBP-DV at room temperature, and is in excellent agreement with experiment. We find that the electron-hole recombination in ideal MBP is driven by the 450 cm(-1) vibrational mode, whereas the recombination in the MBP-DV system is driven by a broad range of vibrational modes. The reduced electron-phonon coupling and increased bandgap in MBP-DV rationalize slower recombination in this material, suggesting that electron-phonon energy losses in MBP can be minimized by creating suitable defects in semiconductor device material.

  19. Black phosphorene/monolayer transition-metal dichalcogenides as two dimensional van der Waals heterostructures: a first-principles study.

    Science.gov (United States)

    You, Baiqing; Wang, Xiaocha; Zheng, Zhida; Mi, Wenbo

    2016-03-14

    The electronic structure of black phosphorene (BP)/monolayer 1H-XT2 (X = Mo, W; T = S, Se, Te) two dimensional (2D) van der Waals heterostructures have been calculated by the first-principles method. It is found that the electronic band structures of both BP and XT2 are preserved in the combined van der Waals heterostructures. The WSe2/BP van der Waals heterostructure demonstrates a type-I band alignment, but the MoS2/BP, MoSe2/BP, MoTe2/BP, WS2/BP and WTe2/BP van der Waals heterostructures demonstrate a type-II band alignment. In particular, the n-type XT2/p-type BP van der Waals heterostructures can be applied in p-n diode and logical devices. Strong spin splitting appears in all of the heterostructures when considering the spin orbital coupling. Our results play a significant role in the prediction of novel 2D van der Waals heterostructures that have potential applications in spin-filter devices, spin field effect transistors, optoelectronic devices, etc. PMID:26899350

  20. The effect of environmental factors on stable isotopic composition of n-alkanes in Mediterranean olive oils

    Science.gov (United States)

    Pedentchouk, Nikolai; Mihailova, Alina; Abbado, Dimitri

    2014-05-01

    Traceability of the geographic origin of olive oils is an important issue from both commercial and health perspectives. This study evaluates the impact of environmental factors on stable C and H isotope compositions of n-alkanes in extra virgin olive oils from Croatia, France, Greece, Italy, Morocco, Portugal, Slovenia, and Spain. The data are used to investigate the applicability of stable isotope methodology for olive oil regional classification in the Mediterranean region. Analysis of stable C isotope composition of n-C29 alkane showed that extra virgin olive oils from Portugal and Spain have the most positive n-C29 alkane delta13C values. Conversely, olive oils from Slovenia, northern and central Italy are characterized by the most negative values. Overall, the n-C29 alkane delta13C values show a positive correlation with the mean air temperature during August-December and a negative correlation with the mean relative humidity during these months. Analysis of stable H isotope composition of n-C29 alkane revealed that the deltaD values are the most positive in olive oils from Greece and Morocco and the most negative in oils from northern Italy. The deltaD values of oils show significant correlation with all the analyses geographical parameters: the mean air temperature and relative humidity during August-December, the total amount of rainfall (the same months) and the annual deltaD values of precipitation. As predictor variables in the Categorical Data Analysis, the n-C29 alkane deltaD values show the most significant discriminative power, followed by the n-C29 alkane delta13C values. Overall, 93.4% of olive oil samples have been classified correctly into one of the production regions. Our findings suggest that an integrated analysis of C and H isotope compositions of n-alkanes extracted from extra virgin olive oil could become a useful tool for geographical provenancing of this highly popular food commodity.

  1. Identification of Novel Genes Involved in Long-Chain n-Alkane Degradation by Acinetobacter sp. Strain DSM 17874▿

    Science.gov (United States)

    Throne-Holst, Mimmi; Wentzel, Alexander; Ellingsen, Trond E.; Kotlar, Hans-Kristian; Zotchev, Sergey B.

    2007-01-01

    Acinetobacter sp. strain DSM 17874 is capable of utilizing n-alkanes with chain lengths ranging from that of decane (C10H22) to that of tetracontane (C40H82) as a sole carbon source. Two genes encoding AlkB-type alkane hydroxylase homologues, designated alkMa and alkMb, have been shown to be involved in the degradation of n-alkanes with chain lengths of from 10 to 20 C atoms in this strain. Here, we describe a novel high-throughput screening method and the screening of a transposon mutant library to identify genes involved in the degradation of n-alkanes with C chain lengths longer than 20, which are solid at 30°C, the optimal growth temperature for Acinetobacter sp. strain DSM 17874. A library consisting of approximately 6,800 Acinetobacter sp. strain DSM 17874 transposon mutants was constructed and screened for mutants unable to grow on dotriacontane (C32H66) while simultaneously showing wild-type growth characteristics on shorter-chain n-alkanes. For 23 such mutants isolated, the genes inactivated by transposon insertion were identified. Targeted inactivation and complementation studies of one of these genes, designated almA and encoding a putative flavin-binding monooxygenase, confirmed its involvement in the strain's metabolism of long-chain n-alkanes. To our knowledge, almA represents the first cloned gene shown to be involved in the bacterial degradation of long-chain n-alkanes of 32 C's and longer. Genes encoding AlmA homologues were also identified in other long-chain n-alkane-degrading Acinetobacter strains. PMID:17400787

  2. Alkane distribution and carbon isotope composition in fossil leaves: An interpretation of plant physiology in the geologic past

    Science.gov (United States)

    Graham, H. V.; Freeman, K. H.

    2014-12-01

    The relative chain-length distribution and carbon-isotope composition of n-alkanes extracted from sedimentary rocks are important geochemical tools for investigating past terrestrial ecosystems. Alkanes preserved in ancient sediments are assumed to be contemporaneous, derived from the same ecosystem, and integrated from the biomass present on the landscape at the time of deposition. Further, there is an underlying assumption that ancient plants exhibited the same metabolic and physiological responses to climate conditions that are observed for modern plants. Interpretations of alkane abundances and isotopic signatures are complicated by the strong influence of phylogenetic affiliation and ecological factors, such as canopy structure. A better understanding of how ecosystem and taxa influence alkane properties, including homologue abundance patterns and leaf-lipid carbon isotope fractionation would help strengthen paleoecological interpretations based on these widely employed plant biomarkers. In this study, we analyze the alkane chain-length distribution and carbon-isotope composition of phytoleim and alkanes (d13Cleaf and d13Clipid) extracted from a selection of Cretaceous and Paleocene fossil leaves from the Guaduas and Cerrejon Formations of Colombia. These data were compared with data for the same families in a modern analogue biome. Photosynthetic and biosynthetic fractionation (∆leaf and elipid) values determined from the fossil material indicate carbon metabolism patterns were similar to modern plants. Fossil data were incorporated in a biomass-weighted mixing model to represent the expected lipid complement of sediment arising from this ecosystem and compared with alkane measurements from the rock matrix. Modeled and observed isotopic and abundance patterns match well for alkane homologs most abundant in plants (i.e., n-C27 to n-C33). The model illustrates the importance of understanding biases in litter flux and taphonomic pressures inherent in the

  3. Nanoscale observation of delayering in alkane films

    DEFF Research Database (Denmark)

    Bai, M.; Knorr, K.; Simpson, M.J.;

    2007-01-01

    Tapping-mode Atomic Force Microscopy and synchrotron X-ray scattering measurements on dotriacontane ( n-C32H66 or C-32) films adsorbed on SiO2- coated Si( 100) wafers reveal a narrow temperature range near the bulk C32 melting point T-b in which a monolayer phase of C32 molecules oriented perpend...

  4. Extremely large perpendicular magnetic anisotropy of an Fe(001) surface capped by 5d transition metal monolayers: A density functional study

    Science.gov (United States)

    Odkhuu, D.; Rhim, S. H.; Park, N.; Hong, S. C.

    2013-11-01

    Significant enhancement of the magnetocrystalline anisotropy (MCA) of an Fe(001) surface capped by 4d and 5d transition metal monolayers is presented in this study using first principles density functional calculations. In particular, an extremely large perpendicular MCA of +10 meV/Ir was found in Ir-capped Fe(001), which originates not from the Fe but from the large spin-orbit coupling of the Ir atoms. From the spin-channel decomposition of the MCA matrix and electronic structure analyses, we find that strong 3d-5d band hybridization in the minority spin state is responsible for the sign changes of the MCA from parallel to perpendicular.

  5. Numerical study of transport properties in monolayer graphene-based double-barrier(well) structures under a time-periodic potential

    Science.gov (United States)

    Chen, Hai Yang

    2014-05-01

    We have analyzed the effect of various system parameters and external time-dependent field on the transport properties of monolayer graphene-based double-barrier(well) structures under a time-periodic potential. Results indicate that the Klein tunneling still exists. Besides, the transmission probability, conductivity, shot noise, and Fano factor exhibit various types of oscillatory behavior with changes in the system parameters, and they are either improved or suppressed in the presence of the time-periodic potential. We have also discussed the reasons underlying these phenomena. The results obtained in this study demonstrate that the transport properties can be controlled by manipulating the structural parameters of the system and the external field strength.

  6. Long chain n-alkanes and their carbon isotopes in lichen species from western Hubei Province: implication for geological records

    Institute of Scientific and Technical Information of China (English)

    Xianyu HUANG; Jiantao XUE; Shouyu GUO

    2012-01-01

    Five coticolous lichen samples were collected from western Hubei Province of China to analyze the long chain n-alkanes and their carbon isotope compositions.The n-alkanes range in carbon number from C17 to C33 with strong odd-over-even predominance between C21and C33.Lichens are dominated by n-C29 in the samples of Dajiuhu,Shennongjia Mountain,but by both n-C23 and n-C29 at Qizimei Mountain.This difference may result from the different environmental conditions in these two sites.The δ13C values of long chain n-alkanes in lichen samples show the signature of C3 plants.Based on compoundspecific carbon isotopic values and previous results,we state that alkane homologs > C23 mainly originate from the symbiotic fungi,while symbiotic algae only contribute trace amount of long chain alkanes.Of great interesting is the occurrence of long chain 3-methylalkanes in the Qizimei samples.These anteiso compounds range from C24 to C32,displaying obvious even-over-odd predominance.This study reveals that the association of long chain 3-methylalkanes with n-C23 alkane might be used as proxies to reconstruct the paleoecological implications of lichens in Earth history.

  7. Analysis of alkane-dependent methanogenic community derived from production water of a high-temperature petroleum reservoir

    Energy Technology Data Exchange (ETDEWEB)

    Mbadinga, Serge Maurice; Li, Kai-Ping; Zhou, Lei; Wang, Li-Ying; Yang, Shi-Zhong; Liu, Jin-Feng; Mu, Bo-Zhong [East China Univ. of Science and Technology, Shanghai (China). State Key Lab. of Bioreactor Engineering and Inst. of Applied Chemistry; Gu, Ji-Dong [Hong Kong Univ. (China). School of Biological Sciences

    2012-10-15

    Microbial assemblage in an n-alkanes-dependent thermophilic methanogenic enrichment cultures derived from production waters of a high-temperature petroleum reservoir was investigated in this study. Substantially higher amounts of methane were generated from the enrichment cultures incubated at 55 C for 528 days with a mixture of long-chain n-alkanes (C{sub 15}-C{sub 20}). Stoichiometric estimation showed that alkanes-dependent methanogenesis accounted for about 19.8% of the total amount of methane expected. Hydrogen was occasionally detected together with methane in the gas phase of the cultures. Chemical analysis of the liquid cultures resulted only in low concentrations of acetate and formate. Phylogenetic analysis of the enrichment revealed the presence of several bacterial taxa related to Firmicutes, Thermodesulfobiaceae, Thermotogaceae, Nitrospiraceae, Dictyoglomaceae, Candidate division OP8 and others without close cultured representatives, and Archaea predominantly related to uncultured members in the order Archaeoglobales and CO{sub 2}-reducing methanogens. Screening of genomic DNA retrieved from the alkanes-amended enrichment cultures also suggested the presence of new alkylsuccinate synthase alpha-subunit (assA) homologues. These findings suggest the presence of poorly characterized (putative) anaerobic n-alkanes degraders in the thermophilic methanogenic enrichment cultures. Our results indicate that methanogenesis of alkanes under thermophilic condition is likely to proceed via syntrophic acetate and/or formate oxidation linked with hydrogenotrophic methanogenesis. (orig.)

  8. Nickel(II) complexes of pentadentate N5 ligands as catalysts for alkane hydroxylation by using m-CPBA as oxidant: a combined experimental and computational study.

    Science.gov (United States)

    Sankaralingam, Muniyandi; Balamurugan, Mani; Palaniandavar, Mallayan; Vadivelu, Prabha; Suresh, Cherumuttathu H

    2014-09-01

    A new family of nickel(II) complexes of the type [Ni(L)(CH(3)CN)](BPh(4))(2), where L=N-methyl-N,N',N'-tris(pyrid-2-ylmethyl)-ethylenediamine (L1, 1), N-benzyl-N,N',N'-tris(pyrid-2-yl-methyl)-ethylenediamine (L2, 2), N-methyl-N,N'-bis(pyrid-2-ylmethyl)-N'-(6-methyl-pyrid-2-yl-methyl)-ethylenediamine (L3, 3), N-methyl-N,N'-bis(pyrid-2-ylmethyl)-N'-(quinolin-2-ylmethyl)-ethylenediamine (L4, 4), and N-methyl-N,N'-bis(pyrid-2-ylmethyl)-N'-imidazole-2-ylmethyl)-ethylenediamine (L5, 5), has been isolated and characterized by means of elemental analysis, mass spectrometry, UV/Vis spectroscopy, and electrochemistry. The single-crystal X-ray structure of [Ni(L(3))(CH(3)CN)](BPh(4))(2) reveals that the nickel(II) center is located in a distorted octahedral coordination geometry constituted by all the five nitrogen atoms of the pentadentate ligand and an acetonitrile molecule. In a dichloromethane/acetonitrile solvent mixture, all the complexes show ligand field bands in the visible region characteristic of an octahedral coordination geometry. They exhibit a one-electron oxidation corresponding to the Ni(II) /Ni(III) redox couple the potential of which depends upon the ligand donor functionalities. The new complexes catalyze the oxidation of cyclohexane in the presence of m-CPBA as oxidant up to a turnover number of 530 with good alcohol selectivity (A/K, 7.1-10.6, A=alcohol, K=ketone). Upon replacing the pyridylmethyl arm in [Ni(L1)(CH(3)CN)](BPh(4))(2) by the strongly σ-bonding but weakly π-bonding imidazolylmethyl arm as in [Ni(L5)(CH(3)CN)](BPh(4))(2) or the sterically demanding 6-methylpyridylmethyl ([Ni(L3)(CH(3)CN)](BPh(4))(2) and the quinolylmethyl arms ([Ni(L4)(CH(3)CN)](BPh(4))(2), both the catalytic activity and the selectivity decrease. DFT studies performed on cyclohexane oxidation by complexes 1 and 5 demonstrate the two spin-state reactivity for the high-spin [(N5)Ni(II)-O(.)] intermediate (ts1(hs), ts2(doublet)), which has a low-spin state located closely in

  9. Langmuir monolayer formation of metal complexes from polymerizable amphiphilic ligands

    NARCIS (Netherlands)

    Werkman, PJ; Schouten, AJ

    1996-01-01

    The monolayer behaviour of 4-(10,12-pentacosadiynoicamidomethyl)-pyridine at the air-water interface was studied by measuring the surface pressure-area isotherms. The amphiphile formed stable monolayers with a clear liquid-expanded (LE) to liquid-condensed phase transition at various temperatures. U

  10. Electrochemical stability of self-assembled monolayers on gold

    NARCIS (Netherlands)

    Beulen, Marcel W.J.; Kastenberg, Miryam I.; Veggel, van Frank C.J.M.; Reinhoudt, David N.

    1998-01-01

    Most applications of functionalized self-assembled monolayers (SAMs) are based on changes in electrochemical properties. Such applications require electrochemical stability. This study reveals that there is only a limited potential window from -0.8 to +0.4 VMSE where self-assembled monolayers of sul

  11. Chain Length Effects of Linear Alkanes in Zeolite Ferrierite. 1. Sorption and 13C NMR Experiments

    NARCIS (Netherlands)

    Well, van Willy J.M.; Cottin, Xavier; Haan, vde Jan W.; Smit, Berend; Nivarthy, Gautam; Lercher, Johannes A.; Hooff, van Jan H.C.; Santen, van Rutger A.

    1998-01-01

    Temperature-programmed desorption, heat of adsorption, adsorption isotherm, and 13C NMR measurements are used to study the sorption properties of linear alkanes in ferrierite. Some remarkable chain length effects are found in these properties. While propane, n-butane, and n-pentane fill the ferrieri

  12. The influence of extraframework aluminum on H-FAU catalyzed cracking of light alkanes

    NARCIS (Netherlands)

    Narbeshuber, T.F.; Brait, A.; Seshan, K.; Lercher, J.A.

    1996-01-01

    The conversion of light linear and branched alkanes on two faujasite samples containing different concentrations of free Brønsted acid sites and extraframework alumina (EFAL) was studied between 733 K and 813 K. Protolytic cracking and bimolecular hydride transfer proceeded solely on Brønsted acid s

  13. Adsorption and desorption of noble gases on activated charcoal: II. 222Rn studies in a monolayer and packed bed.

    Science.gov (United States)

    Scarpitta, S C; Harley, N H

    1990-10-01

    The adsorptive and desorptive characteristics of canisters containing a petroleum-based charcoal were investigated under controlled conditions of temperature, relative humidity, and Rn concentration. Charcoals exposed in a monolayer and packed bed during exposure intervals of 1-7 d demonstrate that Rn adsorption and desorption are dependent on bed depth and the amount of water adsorbed. Changes in the adsorptive and desorptive properties of the charcoal occurred near the break-point where the pores became occluded by water vapor that condenses in the entrance capillaries. Radon-222 adsorption is decreased by an order of magnitude as the amount of adsorbed water exceeds the break-point of the charcoal. The reduction in pore surface due to adsorbed water results in a marked increase in the rate of Rn loss from exposed canisters, accounting for reduced adsorption. The apparent desorption time-constant for a 2-cm bed of loose Witco 6 x 10 mesh charcoal containing 0.220-0.365 kg H2O kg-1 is typically between 2-8 h. The apparent desorption time-constant for an equivalent packed bed containing a water vapor content of 0.026-0.060 kg H2O kg-1, which is below the break-point of the charcoal, is about 15-30 h. Conventional charcoal canisters, if exposed in the fully-opened configuration, can achieve the break-point in less than 4 d at 70% humidity. The use of a diffusion barrier would allow for longer exposure times until the break-point of the charcoal is achieved. PMID:2398008

  14. Emergence of chirality in hexagonally packed monolayers of hexapentyloxytriphenylene on Au(111): a joint experimental and theoretical study.

    Science.gov (United States)

    Sleczkowski, Piotr; Katsonis, Nathalie; Kapitanchuk, Oleksiy; Marchenko, Alexandr; Mathevet, Fabrice; Croset, Bernard; Lacaze, Emmanuelle

    2014-11-11

    We investigate the expression of chirality in a monolayer formed spontaneously by 2,3,6,7,10,11-pentyloxytriphenylene (H5T) on Au(111). We resolve its interface morphology by combining scanning tunneling microscopy (STM) with theoretical calculations of intermolecular and interfacial interaction potentials. We observe two commensurate structures. While both of them belong to a hexagonal space group, analogical to the triangular symmetry of the molecule and the hexagonal symmetry of the substrate surface, they surprisingly reveal a 2D chiral character. The corresponding breaking of symmetry arises for two reasons. First it is due to the establishment of a large molecular density on the substrate, which leads to a rotation of the molecules with respect to the molecular network crystallographic axes to avoid steric repulsion between neighboring alkoxy chains. Second it is due to the molecule-substrate interactions, leading to commensurable large crystallographic cells associated with the large size of the molecule. As a consequence, molecular networks disoriented with respect to the high symmetry directions of the substrate are induced. The high simplicity of the intermolecular and molecule-substrate van der Waals interactions leading to these observations suggests a generic character for this kind of symmetry breaking. We demonstrate that, for similar molecular densities, only two kinds of molecular networks are stabilized by the molecule-substrate interactions. The most stable network favors the interfacial interactions between terminal alkoxy tails and Au(111). The metastable one favors a specific orientation of the triphenylene core with its symmetry axes collinear to the Au⟨110⟩. This specific orientation of the triphenylene cores with respect to Au(111) appears associated with an energy advantage larger by at least 0.26 eV with respect to the disoriented core. PMID:25317696

  15. Shale gas opportunities. Dehydrogenation of light alkanes

    Energy Technology Data Exchange (ETDEWEB)

    Patcas, F.C.; Dieterle, M.; Rezai, A.; Asprion, N. [BASF SE, Ludwigshafen (Germany)

    2013-11-01

    The discovery and use of shale gas in North America has become a game changer for the chemical industry by access to a cheaper feedstock compared to conventional oil. Increased number of ethane crackers spurred increasing interest in light alkanes dehydrogenation. Several companies have announced their interest in new propane dehydrogenation units in North America. BASF is developing light alkanes dehydrogenation technologies for two decades now. BASF developed jointly with Linde the isothermal C3 dehydrogenation process. The latest dehydrogenation catalyst development at BASF focused on a supported and steam resistant Pt-Sn catalyst which yielded excellent selectivity and activity. Intense research work both internally as well as in cooperation with universities contributed to the understanding of the relationship between the surface structure and catalyst performances like activity, selectivity and coking resistance. Using such type of catalysts BASF developed an autothermal propane dehydrogenation as well as a butane dehydrogenation process. The most recent catalyst development was a dehydrogenation catalyst coated on a honeycomb monolith to improve catalyst usage and pressure drop. This will probably be the first industrial usage of catalytic monoliths in a chemical synthesis process. (orig.) (Published in summary form only)

  16. EXAFS in total reflection (reflEXAFS) for the study of organometallic Pd(II) thiol complexes based self-assembled monolayers on gold

    International Nuclear Information System (INIS)

    Graphical abstract: The molecular structure and organization of organometallic Pd(II) thiolates SAMs and multilayers on Au/Si(1 1 1) were investigated by reflEXAFS. For SAMs, S-Au bond lengths, Pd-S-Au bond angles and molecular orientations were assessed. Research highlights: → Organometallic Pt(II) thiolates deposited as SAMs and multilayers on gold. → Molecular structure and organization of SAMs and multilayers studied by reflEXAFS. → SAMs S-Au bond lengths, Pd-S-Au bond angles and molecular orientations are assessed. - Abstract: The molecular structure and organization of self-assembled monolayers (SAMs) and multilayer films grafted onto Au/Si(1 1 1) surfaces of mononuclear transition metal dialkynyl bridged Pd(II) complexes trans-[HS-Pd(PBu3)2-SH] (1), trans-[HS-Pd(PBu3)2(-C≡C-C6H5)] (2) and of the binuclear complex trans, trans-[HS-Pd(PBu3)2(-C≡C-C6H4-C6H4-C≡C-Pd(PBu3)2-SH] (3), have been investigated by extended X-ray absorption fine structure spectroscopy in total reflection conditions (reflEXAFS). ReflEXAFS analysis of the data lead to determine the local structure around Pd atoms, assessing the square-planar geometry around the transition metal in the multilayers case, preserved in the monolayer regime. The investigation on the SAMs also provided the assessment of the S-Au bond length and Pd-S-Au bond angle and on the molecular orientation on the gold substrate of the complexes, confirmed by quantum chemical calculations.

  17. Squeezing molecularly thin alkane lubrication films: Layering transistions and wear

    DEFF Research Database (Denmark)

    Sivebæk, Ion Marius; Samoilov, V. N.; Persson, B. N. J.

    2004-01-01

    The properties of alkane lubricants confined between two approaching solids are investigated by a model that accounts for the curvature and the elastic properties of the solid surfaces. We consider linear alkane molecules of different chain lengths, C(3)H(8); C(4)H(10); C(8)H(18); C(9)H(20); C(10)H...

  18. Gas-phase reactions of the bare Th2+ and U2+ ions with small alkanes, CH4, C2H6, and C3H8: experimental and theoretical study of elementary organoactinide chemistry.

    Science.gov (United States)

    Di Santo, Emanuela; Santos, Marta; Michelini, Maria C; Marçalo, Joaquim; Russo, Nino; Gibson, John K

    2011-02-16

    The gas-phase reactions of two dipositive actinide ions, Th(2+) and U(2+), with CH(4), C(2)H(6), and C(3)H(8) were studied by both experiment and theory. Fourier transform ion cyclotron resonance mass spectrometry was employed to study the bimolecular ion-molecule reactions; the potential energy profiles (PEPs) for the reactions, both observed and nonobserved, were computed by density functional theory (DFT). The experiments revealed that Th(2+) reacts with all three alkanes, including CH(4) to produce ThCH(2)(2+), whereas U(2+) reacts with C(2)H(6) and C(3)H(8), with different product distributions than for Th(2+). The comparative reactivities of Th(2+) and U(2+) toward CH(4) are well explained by the computed PEPs. The PEPs for the reactions with C(2)H(6) effectively rationalize the observed reaction products, ThC(2)H(2)(2+) and UC(2)H(4)(2+). For C(3)H(8) several reaction products were experimentally observed; these and additional potential reaction pathways were computed. The DFT results for the reactions with C(3)H(8) are consistent with the observed reactions and the different products observed for Th(2+) and U(2+); however, several exothermic products which emerge from energetically favorable PEPs were not experimentally observed. The comparison between experiment and theory reveals that DFT can effectively exclude unfavorable reaction pathways, due to energetic barriers and/or endothermic products, and can predict energetic differences in similar reaction pathways for different ions. However, and not surprisingly, a simple evaluation of the PEP features is insufficient to reliably exclude energetically favorable pathways. The computed PEPs, which all proceed by insertion, were used to evaluate the relationship between the energetics of the bare Th(2+) and U(2+) ions and the energies for C-H and C-C activation. It was found that the computed energetics for insertion are entirely consistent with the empirical model which relates insertion efficiency to the

  19. Calculations of gamma-ray spectral profiles of linear alkanes in the positron annihilation process

    Energy Technology Data Exchange (ETDEWEB)

    Ma, Xiaoguang [Molecular Model Discovery Laboratory, Department of Chemistry and Biotechnology, School of Science, Faculty of Science, Engineering and Technology, Swinburne University of Technology, PO Box 218, Hawthorn, Victoria, 3122 (Australia); School of Physics and Optoelectronic Engineering, Ludong University, Shandong, Yantai, 264025 (China); Wang, Feng, E-mail: fwang@swin.edu.au [Molecular Model Discovery Laboratory, Department of Chemistry and Biotechnology, School of Science, Faculty of Science, Engineering and Technology, Swinburne University of Technology, PO Box 218, Hawthorn, Victoria, 3122 (Australia)

    2014-10-15

    Highlights: • The study calculates gamma-ray profiles for linear alkanes (n up to 12) quantum mechanically;. • “Profile quality” has been defined as the root-mean square deviation (RMSD) between the theoretical and the experimental results in the entire region of the profile. • Excellent agreement with measurements suggests that the theory model is applicable to predict other alkanes such as heptane (C{sub 7}H{sub 16}) etc. • The study suggested that gamma-ray spectra may be more sensitive to study smaller alkanes (and their isomers), rather than larger alkanes (i.e., n > 12). - Abstract: The positron–electron annihilation gamma-ray spectra of linear alkanes C{sub n}H{sub 2n+2} (n = 1–12) have been studied systematically. A profile quality (PQ) parameter, χ, is introduced to assess the agreement between the obtained theoretical profiles and the experimental measurements in the entire region of energy shift of the spectra. Together with the Doppler shift (Δε) of the gamma-ray spectra, the two parameters, χ and Δε, are able to provide a more comprehensive assessment of the calculated gamma-ray spectra with respect to available experiment. Applying the recently developed docking model, the present study determines the positrophilic electrons for individual alkanes from which the gamma-ray spectral profiles are calculated. The results achieve an excellent agreement with experiment, not only with respect to the Doppler shift, but also with respect to the gamma-ray profiles in the photon energy region up to 5 keV. The study further calculates the gamma-ray spectra of other linear alkanes in the series without available experimental measurements, such as heptane (C{sub 7}H{sub 16}), octane (C{sub 8}H{sub 18}), decane (C{sub 10}H{sub 22}) and undecane (C{sub 11}H{sub 24}). The results obtained show a dominance of the positrophilic electrons in the lowest occupied valence orbital (LOVO) in the positron–electron annihilation process, in agreement with

  20. Feasibility limits and performance of an absorption cooling machine using light alkane mixtures

    International Nuclear Information System (INIS)

    The performance of a heat-driven vapor absorption chiller with various alkane mixtures as working pairs was studied. A Thermodynamic analysis showed that under specified operating conditions and with a generator temperature below 130 °C, temperature achievable with a simple flat plate collector when solar energy is expected as the driving heat source, the application of some of the proposed alkane mixtures is not feasible. Simulations using ASPEN Plus flow sheeting program are then done with the selected working pairs. All simulations were done specifying the Peng-Robinson equation of state as the property method. A parametric study was carried out allowing the investigation of the generator temperature effect on the system performance and the comparison between performances released with each working pair. Results revealed that a water-cooled absorption machine using the C3H8/n-C9H20 pair as working fluid releases the best performances from a heat driving temperature level of about 100 °C. - Highlights: • Performance of an absorption chiller with various alkane mixtures was studied. • Some of the proposed alkane mixtures is not feasible. • Only the n-C4/n-C6 mixture may be considered for air-cooled machine. • In case of water cooling, C3/n-C9 and n-C4/n-C9 give the best COP

  1. Low temperature carrier transport study of monolayer MoS{sub 2} field effect transistors prepared by chemical vapor deposition under an atmospheric pressure

    Energy Technology Data Exchange (ETDEWEB)

    Liu, Xinke, E-mail: xkliu@szu.edu.cn, E-mail: wujing026@gmail.com; He, Jiazhu; Tang, Dan; Lu, Youming; Zhu, Deliang; Liu, Wenjun; Cao, Peijiang; Han, Sun [College of Materials Science and Engineering, Shenzhen Engineering Laboratory for Advanced Technology of Ceramics, Nanshan District Key Lab for Biopolymer and Safety Evaluation, Shenzhen University, 3688 Nanhai Ave, Shenzhen 518060 (China); Liu, Qiang; Wen, Jiao; Yu, Wenjie [State Key Laboratory of Functional Materials for Informatics, Shanghai Institute of Microsystem and Information Technology, CAS, 865 Chang Ning Road, Shanghai 200050 (China); Liu, Wenjun [State Key Laboratory of ASIC and System, Department of Microelectronics, Fudan University, 220 Handan Road, Shanghai 200433 (China); Wu, Jing, E-mail: xkliu@szu.edu.cn, E-mail: wujing026@gmail.com [Department of Physics, National University of Singapore, 21 Lower Kent Ridge Road, 117576 Singapore (Singapore); He, Zhubing [Department of Materials Science and Engineering, South University of Science and Technology of China, 1088 Xueyuan Road, Shenzhen 518055 (China); Ang, Kah-Wee [Department of Electrical and Computer Engineering, National University of Singapore, 4 Engineering Drive 3, 117583 Singapore (Singapore)

    2015-09-28

    Large size monolayer Molybdenum disulphide (MoS{sub 2}) was successfully grown by chemical vapor deposition method under an atmospheric pressure. The electrical transport properties of the fabricated back-gate monolayer MoS{sub 2} field effect transistors (FETs) were investigated under low temperatures; a peak field effect mobility of 59 cm{sup 2}V{sup −1}s{sup −1} was achieved. With the assist of Raman measurement under low temperature, this work identified the mobility limiting factor for the monolayer MoS{sub 2} FETs: homopolar phonon scattering under low temperature and electron-polar optical phonon scattering at room temperature.

  2. Low temperature carrier transport study of monolayer MoS2 field effect transistors prepared by chemical vapor deposition under an atmospheric pressure

    International Nuclear Information System (INIS)

    Large size monolayer Molybdenum disulphide (MoS2) was successfully grown by chemical vapor deposition method under an atmospheric pressure. The electrical transport properties of the fabricated back-gate monolayer MoS2 field effect transistors (FETs) were investigated under low temperatures; a peak field effect mobility of 59 cm2V−1s−1 was achieved. With the assist of Raman measurement under low temperature, this work identified the mobility limiting factor for the monolayer MoS2 FETs: homopolar phonon scattering under low temperature and electron-polar optical phonon scattering at room temperature

  3. An in vitro and in silico study on the flavonoid-mediated modulation of the transport of 2-amino-1-methyl-6-phenylimidazo[4,5-b]pyridine (PhIP) through Caco-2 monolayers

    NARCIS (Netherlands)

    Schutte, M.E.; Freidig, A.P.; Sandt, J.J.M. van de; Alink, G.M.; Rietjens, I.M.C.M.; Groten, J.P.

    2006-01-01

    The present study describes the effect of different flavonoids on the absorption of the pro-carcinogen PhIP through Caco-2 monolayers and the development of an in silico model describing this process taking into account passive diffusion and active transport of PhIP. Various flavonoids stimulated th

  4. An in vitro and in silico study on the flavonoid mediated modulation of the transport of 2-amino-1-methyl-6-phenylimidazo[4,5-b]pyridine (PhIP) through Caco-2 monolayers

    NARCIS (Netherlands)

    Schutte, M.E.; Freidig, A.P.; Sandt, van de J.J.M.; Alink, G.M.; Rietjens, I.M.C.M.; Groten, J.P.

    2006-01-01

    The present study describes the effect of different flavonoids on the absorption of the pro-carcinogen PhIP through Caco-2 monolayers and the development of an in silico model describing this process taking into account passive diffusion and active transport of PhIP. Various flavonoids stimulated th

  5. Hydrocarbon metabolism by Brevibacterium erythrogenes: normal and branched alkanes.

    Science.gov (United States)

    Pirnik, M P; Atlas, R M; Bartha, R

    1974-09-01

    Branched- and straight-chain alkanes are metabolized by Brevibacterium erythrogenes by means of two distinct pathways. Normal alkanes (e.g., n-pentadecane) are degraded, after terminal oxidation, by the beta-oxidation system operational in fatty acid catabolism. Branched alkanes like pristane (2,6,10,14-tetramethylpentadecane) and 2-methylundecane are degraded as dicarboxylic acids, which also undergo beta-oxidation. Pristane-derived intermediates are observed to accumulate, with time, as a series of dicarboxylic acids. This dicarboxylic acid pathway is not observed in the presence of normal alkanes. Release of (14)CO(2) from [1-(14)C]pristane is delayed, or entirely inhibited, in the presence of n-hexadecane, whereas CO(2) release from n-hexadecane remains unaffected. These results suggest an inducible dicarboxylic acid pathway for degradation of branched-chain alkanes. PMID:4852318

  6. Cool-flame Extinction During N-Alkane Droplet Combustion in Microgravity

    Science.gov (United States)

    Nayagam, Vedha; Dietrich, Daniel L.; Hicks, Michael C.; Williams, Forman A.

    2014-01-01

    Recent droplet combustion experiments onboard the International Space Station (ISS) have revealed that large n-alkane droplets can continue to burn quasi-steadily following radiative extinction in a low-temperature regime, characterized by negative-temperaturecoefficient (NTC) chemistry. In this study we report experimental observations of n-heptane, n-octane, and n-decane droplets of varying initial sizes burning in oxygen/nitrogen/carbon dioxide and oxygen/helium/nitrogen environments at 1.0, 0.7, and 0.5 atmospheric pressures. The oxygen concentration in these tests varied in the range of 14% to 25% by volume. Large n-alkane droplets exhibited quasi-steady low-temperature burning and extinction following radiative extinction of the visible flame while smaller droplets burned to completion or disruptively extinguished. A vapor-cloud formed in most cases slightly prior to or following the "cool flame" extinction. Results for droplet burning rates in both the hot-flame and cool-flame regimes as well as droplet extinction diameters at the end of each stage are presented. Time histories of radiant emission from the droplet captured using broadband radiometers are also presented. Remarkably the "cool flame" extinction diameters for all the three n-alkanes follow a trend reminiscent of the ignition delay times observed in previous studies. The similarities and differences among the n-alkanes during "cool flame" combustion are discussed using simplified theoretical models of the phenomenon

  7. Effects of ambient conditions on adsorbed surfactant and polymer monolayers

    International Nuclear Information System (INIS)

    The physical properties of surfactant-coated and polyelectrolyte-coated surfaces in adhesive contact in air have been studied using the surface forces apparatus technique. Various physisorbed monolayers with different head groups and chains (or polymer segments) were prepared both by adsorption form solution (self-assembly) and by the Langmuir-Blodgett deposition technique. The results show that many monolayer properties depend on the atmospheric conditions such as the relative humidity or presence of organic vapors and that these properties can further change when two monolayer-coated surfaces are brought into contact. These properties include monolayer composition and structure, thickness and compressibility, fluidity and phase state (i.e., whether solid, gel, or liquid), and the adhesion between two monolayer-coated surfaces. In addition, we find that both out-of-plane and in-plane (lateral) phase transitions can be induced in certain adsorbed monolayers when they are subjected to a compressive stress. The results provide new insights into molecular ordering and dynamics in physisorbed monolayers and how monolayers are affected when they are exposed to vapors or when they interact with other surfaces. 18 refs., 13 figs., 4 tabs

  8. Electrochemical and structural characterization of self-assembled thiol monolayers on gold.

    NARCIS (Netherlands)

    Sondag-Huethorst, J.A.M.

    1994-01-01

    Self-assembled alkanethiol monolayers on gold are used as model systems in a fundamental study of the potential-dependent wetting and of the galvanic metal deposition. For using such monolayers as model systems, well-defined and ordered monolayers are required. In order to control the quality of the

  9. Enhanced biodegradation of alkane hydrocarbons and crude oil by mixed strains and bacterial community analysis.

    Science.gov (United States)

    Chen, Yu; Li, Chen; Zhou, Zhengxi; Wen, Jianping; You, Xueyi; Mao, Youzhi; Lu, Chunzhe; Huo, Guangxin; Jia, Xiaoqiang

    2014-04-01

    In this study, two strains, Acinetobacter sp. XM-02 and Pseudomonas sp. XM-01, were isolated from soil samples polluted by crude oil at Bohai offshore. The former one could degrade alkane hydrocarbons (crude oil and diesel, 1:4 (v/v)) and crude oil efficiently; the latter one failed to grow on alkane hydrocarbons but could produce rhamnolipid (a biosurfactant) with glycerol as sole carbon source. Compared with pure culture, mixed culture of the two strains showed higher capability in degrading alkane hydrocarbons and crude oil of which degradation rate were increased from 89.35 and 74.32 ± 4.09 to 97.41 and 87.29 ± 2.41 %, respectively. In the mixed culture, Acinetobacter sp. XM-02 grew fast with sufficient carbon source and produced intermediates which were subsequently utilized for the growth of Pseudomonas sp. XM-01 and then, rhamnolipid was produced by Pseudomonas sp. XM-01. Till the end of the process, Acinetobacter sp. XM-02 was inhibited by the rapid growth of Pseudomonas sp. XM-01. In addition, alkane hydrocarbon degradation rate of the mixed culture increased by 8.06 to 97.41 % compared with 87.29 % of the pure culture. The surface tension of medium dropping from 73.2 × 10(-3) to 28.6 × 10(-3) N/m. Based on newly found cooperation between the degrader and the coworking strain, rational investigations and optimal strategies to alkane hydrocarbons biodegradation were utilized for enhancing crude oil biodegradation. PMID:24532465

  10. Microbial Communities in Methane- and Short Chain Alkane-Rich Hydrothermal Sediments of Guaymas Basin.

    Science.gov (United States)

    Dowell, Frederick; Cardman, Zena; Dasarathy, Srishti; Kellermann, Matthias Y; Lipp, Julius S; Ruff, S Emil; Biddle, Jennifer F; McKay, Luke J; MacGregor, Barbara J; Lloyd, Karen G; Albert, Daniel B; Mendlovitz, Howard; Hinrichs, Kai-Uwe; Teske, Andreas

    2016-01-01

    The hydrothermal sediments of Guaymas Basin, an active spreading center in the Gulf of California (Mexico), are rich in porewater methane, short-chain alkanes, sulfate and sulfide, and provide a model system to explore habitat preferences of microorganisms, including sulfate-dependent, methane- and short chain alkane-oxidizing microbial communities. In this study, hot sediments (above 60°C) covered with sulfur-oxidizing microbial mats surrounding a hydrothermal mound (termed "Mat Mound") were characterized by porewater geochemistry of methane, C2-C6 short-chain alkanes, sulfate, sulfide, sulfate reduction rate measurements, in situ temperature gradients, bacterial and archaeal 16S rRNA gene clone libraries and V6 tag pyrosequencing. The most abundantly detected groups in the Mat mound sediments include anaerobic methane-oxidizing archaea of the ANME-1 lineage and its sister clade ANME-1Guaymas, the uncultured bacterial groups SEEP-SRB2 within the Deltaproteobacteria and the separately branching HotSeep-1 Group; these uncultured bacteria are candidates for sulfate-reducing alkane oxidation and for sulfate-reducing syntrophy with ANME archaea. The archaeal dataset indicates distinct habitat preferences for ANME-1, ANME-1-Guaymas, and ANME-2 archaea in Guaymas Basin hydrothermal sediments. The bacterial groups SEEP-SRB2 and HotSeep-1 co-occur with ANME-1 and ANME-1Guaymas in hydrothermally active sediments underneath microbial mats in Guaymas Basin. We propose the working hypothesis that this mixed bacterial and archaeal community catalyzes the oxidation of both methane and short-chain alkanes, and constitutes a microbial community signature that is characteristic for hydrothermal and/or cold seep sediments containing both substrates.

  11. Microbial communities in methane- and short chain alkane-rich hydrothermal sediments of Guaymas Basin

    Directory of Open Access Journals (Sweden)

    Frederick eDowell

    2016-01-01

    Full Text Available The hydrothermal sediments of Guaymas Basin, an active spreading center in the Gulf of California (Mexico, are rich in porewater methane, short-chain alkanes, sulfate and sulfide, and provide a model system to explore habitat preferences of microorganisms, including sulfate-dependent, methane- and short chain alkane-oxidizing microbial communities. In this study, sediments (above 60˚C covered with sulfur-oxidizing microbial mats surrounding a hydrothermal mound (termed Mat Mound were characterized by porewater geochemistry of methane, C2-C6 short-chain alkanes, sulfate, sulfide, sulfate reduction rate measurements, in-situ temperature gradients, bacterial and archaeal 16S rRNA gene clone libraries and V6 tag pyrosequencing. The most abundantly detected groups in the Mat mound sediments include anaerobic methane-oxidizing archaea of the ANME-1 lineage and its sister clade ANME-1Guaymas, the uncultured bacterial groups SEEP-SRB2 within the Deltaproteobacteria and the separately branching HotSeep-1 Group; these uncultured bacteria are candidates for sulfate-reducing alkane oxidation and for sulfate-reducing syntrophy with ANME archaea. The archaeal dataset indicates distinct habitat preferences for ANME-1, ANME-1-Guaymas and ANME-2 archaea in Guaymas Basin hydrothermal sediments. The bacterial groups SEEP-SRB2 and HotSeep-1 co-occur with ANME-1 and ANME-1Guaymas in hydrothermally active sediments underneath microbial mats in Guaymas Basin. We propose the working hypothesis that this mixed bacterial and archaeal community catalyzes the oxidation of both methane and short-chain alkanes, and constitutes a microbial community signature that is characteristic for hydrothermal and/or cold seep sediments containing both substrates.

  12. Environmental chemistry and toxicology of polychlorinated n-alkanes.

    Science.gov (United States)

    Tomy, G T; Fisk, A T; Westmore, J B; Muir, D C

    1998-01-01

    Polychlorinated-n-alkanes (PCAs) or chlorinated paraffins consist of C10 to C30 n-alkanes with chlorine content from 30% to 70% by mass. PCAs are used as high-temperature lubricants, plasticizers, flame retardants, and additives in adhesives, paints, rubber, and sealants. This review presents the existing data on the environmental chemistry and toxicology of PCAs and a preliminary exposure and risk assessment. There is limited information on the levels, fate, or biological effects of PCAs in the environment. This results both from the difficulty associated with quantifying PCAs, because of the complexity inherent to commercial formulations, and from the limited knowledge of their physicochemical properties and biodegradation rates. There are indications that PCAs are widespread environmental contaminants at ng/L levels in surface waters and ng/g (wet wt) levels in biota. However, environmental measurements of PCAs are very limited in the U.S. and Canada, and are only slightly more detailed in western Europe. Assuming that reported water concentrations are mainly caused by the short chain (C10-C13) compounds, aquatic organisms may be at risk from exposure to PCAs. Fugacity level II modeling for two representative PCAs, using the best available physicochemical property data and estimated degradation rates, suggested that C16C24Cl10 would achieve higher concentrations in biota, sediment, and soil than C12H20Cl6 because of slower degradation rates and lower water solubility. Environmental residence time of C16H24Cl10 is estimated to be 520 d compared to 210 d for C12H20Cl6. Future studies will require better analytical methods and reference materials certified for PCA content. Additional data are needed to evaluate exposure of biota to PCAs in the environment, particularly in light of their continued production and usage around the globe. PMID:9751033

  13. Binary self-assembled monolayers of alkanethiols on gold: deposition from solution versus microcontact printing and the study of surface nanobubbles.

    Science.gov (United States)

    Bayat, Haider; Tranchida, Davide; Song, Bo; Walczyk, Wiktoria; Sperotto, Elena; Schönherr, Holger

    2011-02-15

    The coadsorption of alkanethiols on noble metals has been recognized for a long time as a suitable means of affording surfaces with systematically varied wettability and other properties. In this article, we report on a comparative study of the composition of the mixed self-assembled monolayers (SAMs) obtained (i) by the coadsorption of octadecanethiol (ODT) and 16-mercaptohexadecanoic acid (MHDA) from ethanol and chloroform onto gold substrates and (ii) by microcontact printing using poly(dimethyl siloxane) (PDMS) stamps. SAMs prepared by coadsorption from solution showed a preferential adsorption of ODT for both solvents, but this trend was reversed in microcontact-printed SAMs when using chloroform as a solvent, as evidenced by contact angle and Fourier transform infrared (FTIR) spectroscopy measurements. An approximately linear relationship between the static contact angle and the degree of swelling with different solvents was observed, which suggests that the surface composition can be controlled by the interaction of the solvent and the PDMS elastomer. The altered preference is attributed to the different partitioning of the two thiols into solvent-swelled PDMS, as shown by (1)H NMR spectroscopy. Finally, molecularly mixed binary SAMs on ODT and MHDA on template-stripped gold were applied to study the effect of surface nanobubbles on wettability by atomic force microscopy (AFM). With a decreasing macroscopic contact angle measured through water, the nanoscopic contact angle was found to decrease as well. PMID:21117682

  14. Late Quaternary environmental changes inferred from n-alkane evidence in coastal area of southern Hainan Island, China

    Science.gov (United States)

    Wang, Mengyuan; Zheng, Zhuo

    2016-04-01

    The studied core was a coastal core in Hainan Island, China. It is in length of 49.01m and divided into four Units (MIS 1~MIS 6) according to lithology description. The Optically Stimulated Luminescence (OSL) attributes the sediments from Unit 3 to the Oxygen Isotope Stage of MIS 5e (Unit 3b and 3c) and 5d (Unit 3a). To interpret the origination of organic carbons and to reconstruct paleovegetation changes, n-alkane, δ13C and TOC have been used in the present research. The result of n-alkanes distribution indicates a series of changes of sedimentary environment and terrestrial input. The shallow water facies at Unit 2, 3a and 4 is mainly characterized by short carbon chain n-alkanes and relatively low concentration. Contrasting with that of deep-water marine facies of MIS 5e (Unit 3b), the n-alkane pattern is typical bimodal and the main peaks are both in short and long carbon chains. During Unit 3b-1 (MIS 5e), more terrestrial original n-alkanes contribute to the concentration of TOC than oceanic. Organic matter source is mainly terrestrial origination. Total organic matter input mechanism of TLG-01 correlates with sediment grain size (average grain size). Total organic carbon input is enhanced with the increasing of fine grain size component. The variation of CPI (25-33) value in this study correlates with hydrological energy. The highest CPI (25-33) value is shown in the high sea level period of MIS 5e, comparing with that in MIS 5d and MIS 1. High CPI value corresponds to high TOC and average grain size (Φ) value. In the weak hydrological energy sedimentary environment, more terrestrial organic matter, together with TOC, deposit in the study area. ACL (25-33) index display higher values in the interglacial period (MIS 5 and MIS 1) than MIS 3 (sediments weathered during MIS 2) and MIS 6. Paq proxy, together with δ13C, estimates the mangrove growing depth in MIS 5e. The correlation between δ13C and each carbon chain alkane state stabilize and turbulence of

  15. n-alkane distribution coupled with organic carbon isotope composition in the shell bar section, Qarhan paleolake, Qaidam basin, NE Tibetan Plateau

    Institute of Scientific and Technical Information of China (English)

    Yang PU; Hucai ZHANG; Guoliang LEI; Fengqin CHANG; Mingsheng YANG; Xianyu HUANG

    2009-01-01

    Lipids extracted from lacustrine deposits in the paleolake Qarhan of the Qaidam basin in the northeastern Tibetan Plateau were determined by conventional gas chromatography-mass spectrometry. Several series of biomarkers were identified, mainly including n-alkanes, n-alkan-2-ones, n-alkanoic acids, branched alkanes, triter-penoids and steroids, indicative of various biogenic contributions. On the basis of cluster analysis, the n-C15, n-C17, n-C19 alkanes were proposed to be derived from algae and/or photosynthetic bacteria, the n-C21 n-C23, n-C25 homologues from aquatic plants, and the n-C29, n-C31 homologues from vascular plants. In contrast, the n-C27 alkane is not categorized in the n-C29 and n-C31 group of alkanes, probably due to more complex origins including both aquatic and vascular plants, and/or differential biodegradation. Stratigraphically, layers-2, 4 and 5 were found to show a close relationship in n-alkane distribution, associated with a positive shift in carbon isotope composition of bulk organic matter (δ13Corg), inferring a cold/dry period. Layers-1 and 6 were clustered together in association with a negative δ13Corg excursion, probably indicating a relatively warm/humid climate. The potential coupling between the n-alkane distributions and δ13Corg, suggests a consequence of vegetation change in response to climate change, with the late MIS3 being shown to be unstable, thought to be the climatic optimum in the Tibetan Plateau. Our results suggest that the cluster analysis used in this study probably provides an effective and authentic method to investigate the n-alkane distribution in paleolake sediments.

  16. Alkane oxidation by Pseudomonas oleovorans : genes and proteins

    NARCIS (Netherlands)

    van Beilen, Jan Berthold

    1994-01-01

    This thesis deals with the molecular genetics and biochemistry of oxidation of medium chainlength alkanes by P. oleovorans, as part of a program to develop biotechnological processes, based on oxygenases.

  17. At what chain length do unbranched alkanes prefer folded conformations?

    CERN Document Server

    Byrd, Jason N; Montgomery, John A

    2013-01-01

    Short unbranched alkanes are known to prefer linear conformations, while long unbranched alkanes are folded. It is not known with certainty at what chain length the linear conformation is no longer the global minimum. To clarify this point, we use {\\it ab initio} and density functional methods to compute the relative energies of the linear and hairpin alkane conformers for increasing chain lengths. Extensive electronic structure calculations are performed to obtain optimized geometries, harmonic frequencies and accurate single point energies for the selected alkane conformers from octane through octadecane. Benchmark CCSD(T)/cc-pVTZ single point calculations are performed for chains through tetradecane, while approximate methods are required for the longer chains up to octadecane. Using frozen natural orbitals to unambiguously truncate the virtual orbital space we are able to compute composite CCSD FNO(T) single point energies for all the chain lengths. This approximate composite method has significant comput...

  18. Polycyclic aromatic hydrocarbons (PAHs) and n-Alkanes in beaked sea snake Enhydrina schistose (Daudin, 1803) from the Mandovi Estuary, Goa

    Digital Repository Service at National Institute of Oceanography (India)

    Mote, S.; RanjeetKumar; Naik, B.G.; Ingole, B.S.

    An ecotoxicological study were conducted to evaluate the concentrations of PAHs and n-alkanes, in gut, liver and kidney tissues of two individuals of Enhydrina schistose (Daudin, 1803), using gas chromatography/mass spectrometry. The concentrations...

  19. Binding structure and kinetics of surfactin monolayer formed at the air/water interface to counterions: A molecular dynamics simulation study.

    Science.gov (United States)

    Gang, Hongze; Liu, Jinfeng; Mu, Bozhong

    2015-10-01

    The binding structure and kinetics of ionized surfactin monolayer formed at the air/water interface to five counterions, Li+, Na+, K+, Ca2+, and Ba2+ (molar ratios of surfactin to monovalent and divalent counterions are 1:2 and 1:1 respectively), have been studied using molecular dynamics simulation. The results show that surfactin exhibits higher binding affinity to divalent counterions, Ca2+, and Ba2+, and smaller monovalent counterion, Li+, than Na+ and K+. Both carboxyl groups in surfactin are accessible for counterions, but the carboxyl group in Glu1 is easier to access by counterions than Asp5. Salt bridges are widely built between carboxyl groups by counterions, and the probability of the formation of intermolecular salt bridge is markedly larger than that of intramolecular salt bridge. Divalent counterions perform well in forming salt bridges between carboxyl groups. The salt bridges mediated by Ca2+ are so rigid that the lifetimes are about 0.13 ns, and the break rates of these salt bridges are 1-2 orders of magnitude smaller than those mediated by K+ which is about 5 ps in duration. The positions of the hydration layer of carboxyl groups are independent of counterions, but the bound counterions induce the dehydration of carboxyl groups and disturb the hydrogen bonds built between carboxyl group and hydration water.

  20. Coverage dependent organic-metal interaction studied by high-resolution core level spectroscopy: SnPc (sub)monolayers on Ag(1 1 1)

    Energy Technology Data Exchange (ETDEWEB)

    Haeming, M.; Scheuermann, C. [Experimentelle Physik II, Universitaet Wuerzburg, D-97074 Wuerzburg (Germany); Schoell, A. [Experimentelle Physik II, Universitaet Wuerzburg, D-97074 Wuerzburg (Germany); Forschungszentrum Karlsruhe, Gemeinschaftslabor fuer Nanoanalytik, D-76021 Karlsruhe (Germany)], E-mail: achim.schoell@physik.uni-wuerzburg.de; Reinert, F. [Experimentelle Physik II, Universitaet Wuerzburg, D-97074 Wuerzburg (Germany); Forschungszentrum Karlsruhe, Gemeinschaftslabor fuer Nanoanalytik, D-76021 Karlsruhe (Germany); Umbach, E. [Experimentelle Physik II, Universitaet Wuerzburg, D-97074 Wuerzburg (Germany); Forschungszentrum Karlsruhe and Karlsruhe Institute of Technology, Weberstrasse 5, D-76021 Karlsruhe (Germany)

    2009-08-15

    We study the electronic structure of tin-phthalocyanine (SnPc) molecules adsorbed on a Ag(1 1 1) surface by high-resolution photoelectron spectroscopy. We particularly address the effect of different SnPc coverages on the interaction and charge transfer at the interface. The results give evidence for a covalent molecule-substrate interaction, which is temperature and coverage dependent. The valence and core level spectra as well as the work function measurements allow us monitoring subtle differences in the strength of the interface interaction, thus demonstrating the sensitivity of the methods. The results consistently show the effect of charge exchange between substrate and molecules which obviously leads to a net charge transfer into the SnPc molecules, and which is increased with decreasing coverage. Surprisingly, the Sn3d core levels are neither effected by variations of charge transfer and interaction strength, nor by a possible 'Sn-up' or 'Sn-down' orientation, which have been observed for sub-monolayers.

  1. Phonons in bulk and monolayer HfS2 and possibility of phonon-mediated superconductivity: A first-principles study

    Science.gov (United States)

    Chen, Jianyong

    2016-07-01

    Using density functional perturbation theory (DFPT) with Born effective charges included, we calculate in detail the phonons of bulk and monolayer HfS2. Our calculated phonon frequencies and LO-TO splitting agree well with experimental data. The variation of phonon frequencies from bulk to monolayer can be accounted for in terms of the delicate balance of the long- and short-range force constants. The ultimate strength under biaxial tensile strain is explored for the first time. Monolayer HfS2 can suffer only no more than 6% tensile strain. Our important finding is that the phonon gap appears when goes to single layer from bulk and can be tuned by biaxial tension. By analysing the Eliashberg function we conclude that HfS2 cannot turn to superconductivity by electron-phonon interaction.

  2. Alkane Biosynthesis Genes in Cyanobacteria and Their Transcriptional Organization

    OpenAIRE

    Stephan eKlähn; Desiree eBaumgartner; Ulrike ePfreundt; Karsten eVoigt; Verena eSchoen; Claudia eSteglich; Hess, Wolfgang R

    2014-01-01

    In cyanobacteria, alkanes are synthesized from a fatty acyl-ACP by two enzymes, acyl-acyl carrier protein reductase (AAR) and aldehyde deformylating oxygenase (ADO). Despite the great interest in the exploitation for biofuel production, nothing is known about the transcriptional organization of their genes or the physiological function of alkane synthesis. The comparison of 115 microarray datasets indicates the relatively constitutive expression of aar and ado genes. The analysis of 181 avail...

  3. Variability of source water signal in δD values of sedimentary n-alkanes of Lake Nam Co

    Science.gov (United States)

    Guenther, F.; Gleixner, G.; Xu, B.; Yao, T.

    2010-12-01

    Terrestrial and aquatic organisms use ambient water like lake water and precipitation as primary hydrogen source for biomarker synthesis. However, biosynthetic fractionations as well as changes in the environmental parameters such as temperature, relative humidity and evapotranspiration modify the hydrogen isotopic composition recorded in biomarkers (n-alkanes). So far, it is not clearly understood if the variability of source water or climate variations at the catchment scale are recorded in the sedimentary δD values of biomarkers. In this study, we compared the compound-specific δD values of sedimentary n-alkanes from Lake Nam Co with isotope values from different ice cores of the Tibetan Plateau (Dasuopu, Puruogangri and East Rongbuk glacier) and other climate proxies like temperature and radiation. Based on the datasets, the isotope signal of precipitation is of minor importance for the δD values of sedimentary n-alkanes. Terrestrial n-alkanes are better correlated with temperature and radiation. Algal n-alkanes are neither correlated with precipitation nor with climatic parameters. This suggests strong influence of evapotranspiration at the plant level, whereas the isotopic content of algae is controlled by the lake water. Consequently climate variability effecting ecosystem evapotranspiration can be reconstructed using δD values of biomarkers.

  4. Structural and electronic properties of multilayer graphene on monolayer hexagonal boron nitride/nickel (111) interface system: A van der Waals density functional study

    Science.gov (United States)

    Yelgel, Celal

    2016-02-01

    The structural and electronic properties of multilayer graphene adsorbed on monolayer hexagonal boron nitride (h-BN)/Ni(111) interface system are investigated using the density functional theory with a recently developed non-local van der Waals density functional (rvv10). The most energetically favourable configuration for a monolayer h-BN/Ni(111) interface is found to be N atom atop the Ni atoms and B atom in fcc site with the interlayer distance of 2.04 Å and adsorption energy of 302 meV/BN. Our results show that increasing graphene layers on a monolayer h-BN/Ni(111) interface leads to a weakening of the interfacial interaction between the monolayer h-BN and Ni(111) surface. The adsorption energy of graphene layers on the h-BN/Ni(111) interface is found to be in the range of the 50-120 meV/C atom as the vertical distance from h-BN to the bottommost graphene layers decreases. With the adsorption of a multilayer graphene on the monolayer h-BN/Ni(111) interface system, the band gap of 0.12 eV and 0.25 eV opening in monolayer graphene and bilayer graphene near the K point is found with an upward shifting of the Fermi level. However, a stacking-sensitive band gap is opened in trilayer graphene. We obtain the band gap of 0.35 eV close to the K point with forming a Mexican hat band structure for ABC-stacked trilayer graphene.

  5. The Modeling of Pulmonary Particulate Matter Transport Using Langmuir Monolayers

    Science.gov (United States)

    Eaton, Jeremy M.

    The effects of a barrier in proximity to the air-water interface on the dynamics of a Langmuir monolayer system are observed. A monolayer of Survanta, bovine lung surfactant, is deposited onto the interface of an aqueous buffer solution. Polystyrene particles one micron in diameter and tagged with fluorescent carboxylate groups are distributed evenly throughout the monolayer surface. The bead-monolayer system is compressed and expanded to induce folding. A polydimethylsiloxane (PDMS) substrate is placed below the monolayer in the buffer solution to study interactions between the folding monolayer and a barrier. The presence of the substrate is shown to shift surface pressure-area isotherms toward regions of lower area by an average of 8.9 mN/m. The surface of the PDMS substrate can be imaged using fluorescence microscopy to detect the presence of particles or surfactant that may have been transported there from the air-water interface during folding. Images show the transferral of particles and monolayer together suggesting the pinch-off of a fold or the direct interaction of a fold with the barrier.

  6. First principles study on molecule doping in MoS2 monolayer%单层MoS2分子掺杂的第一性原理研究

    Institute of Scientific and Technical Information of China (English)

    刘俊; 梁培; 舒海波; 沈涛; 邢凇; 吴琼

    2014-01-01

    基于密度泛函理论的第一性原理平面波赝势方法的计算,研究了通过吸附不同有机分子对单层MoS2进行化学掺杂。计算结果表明有机分子与MoS2单层衬底间的相互作用主要是范德瓦尔斯作用力。吸附不同有机分子的单层MoS2结构均表现出间接带隙的特征,还表明吸附TTF分子的单层MoS2结构表现出n型半导体的特质,而吸附TCNQ, TCNE两种分子的单层MoS2结构均表现出p型半导体的性质,这些结果表明可以通过改变吸附的分子来实现对单层MoS2的掺杂类型的调控。本文的研究结果将对单层MoS2在晶体管中的应用提供理论基础和指导。%The chemical doping of organic molecules adsorbed on MoS2 monolayers are systematically studied by using plane-wave pseudo-potential method based on the density functional theory. Our results indicate that the interaction between organic molecules and the MoS2 monolayer substrate is of van der Waals’ type of force. Structure of monolayer MoS2 which adsorbs different organic molecules, exhibits indirect bandgap characteristics, and the energy band structure of monolayer MoS2 which adsorbs TTF molecules exhibits n-type conducting characteristics. However, the structures of monolayer MoS2 which adsorbs TCNQ or TCNE molecules would exhibit p-type conductivity characteristics. Thus, the results indicate that the doping type of molecules in monolayer MoS2 can be regulated by adsorbing different molecules. Results of this study may provide a theoretical basis for single-layer MoS2 transistor and guidance for it in the application.

  7. The interaction of bioactive peptides with an immobilized phosphatidylcholine monolayer.

    OpenAIRE

    Mozsolits, H; Lee, T. H.; Wirth, H J; Perlmutter, P; Aguilar, M I

    1999-01-01

    The interaction of three bioactive peptides, bombesin, beta-endorphin, and glucagon with a phosphatidylcholine monolayer that was immobilized to porous silica particles and packed into a stainless steel column cartridge, has been studied using dynamic elution techniques. This immobilized lipid monolayer provides a biophysical model system with which to study the binding of peptides to a lipid membrane. In particular, the influence of temperature and methanol concentration on the affinity of e...

  8. Evidence from carbon isotope measurements for biological origins of individual longchain n-alkanes in sediments from the Nansha Sea, China

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    Carbon isotopes are measured for individual long-chain n-alkanes in sediments from the Nansha Sea. The features of carbon isotopic compositions of individual n-alkanes and their origins are studied. The results show that the long-chain n-aikanes have a light carbon isotopic composition and a genetic feature of mixing sources, and low-latitude higher plants and microbes are considered to be their main end member sources. Based on the abundances and carbon isotopic compositions of individual n-alkanes, the fractional contributions of the two end member sources to individual n-aikanes are quantitatively calculated by using a mixing model. The obtained data indicate that the fractional contributions of the two biological sources are different in the three samples. A trend is that the contribution of microbes increases with the depth. These results provide the theory basis and quantitatively studied method for carbon isotopic applied research of individual n-alkanes.

  9. Experimental Investigation of Microbially Induced Corrosion of Test Samples and Effect of Self-Assembled Hydrophobic Monolayers. Exposure of Test Samples to Continuous Microbial Cultures, Chemical Analysis, and Biochemical Studies

    Energy Technology Data Exchange (ETDEWEB)

    Laurinavichius, K.S.

    1998-09-30

    The study of biocorrosion of aluminum and beryllium samples were performed under conditions of continuous fermentation of thermophilic anaerobic microorganisms of different groups. This allowed us to examine the effect of various types of metabolic reactions of reduction-oxidation proceeding at different pH and temperatures under highly reduced conditions on aluminum and beryllium corrosion and effect of self-assembled hydrophobic monolayers.

  10. Assessment and modulation of acamprosate intestinal absorption: comparative studies using in situ, in vitro (CACO-2 cell monolayers) and in vivo models.

    Science.gov (United States)

    Zornoza, Teodoro; Cano-Cebrián, María José; Nalda-Molina, Ricardo; Guerri, Consuelo; Granero, Luis; Polache, Ana

    2004-08-01

    The purpose of this study was to explore the intestinal absorption mechanism of acamprosate and to attempt to improve the bioavailability (BA) of the drug through modulation of its intestinal absorption using two enhancers (polysorbate 80 and sodium caprate) based on in situ, in vitro and in vivo models and comparing the results obtained. Intestinal transport of the drug, in the absence and in presence of polysorbate 80 (0.06, 0.28 and 9.6 mM) or sodium caprate (13 and 16 mM) was measured by using an in situ rat gut technique and Caco-2 cell monolayers. Additionally, the effect of sodium caprate on drug oral bioavailability, measured as urinary recovery, was quantified by performing in vivo experiments with the rat as animal model. Only sodium caprate was able to increase the absorption rate constant (ka) of acamprosate in the mid-intestine of the rats from 0.29 +/- 0.07 h-1 in the absence of the promoter to 0.51 +/- 0.19 h-1 in the presence of C10 16 mM, along with the apparent permeability (Papp) obtained in Caco-2 cells (around two-fold). However, the drug bioavailability in rats (around 20%) did not improve in the presence of any of the concentrations tested (13, 16 and 50 mM). It is concluded that acamprosate absorption likely occurs via paracellular pathway and can be enhanced by sodium caprate in situ and in vitro but not in vivo-thus suggesting that although in situ and in vitro studies could be useful in early screening to select a potential promoter, in vivo studies in animal models are necessary to confirm the utility of the enhancer and to determine the influence of physiological variables.

  11. Tunable electronic and magnetic properties of a MoS2 monolayer with vacancies under elastic planar strain: Ab initio study

    Science.gov (United States)

    Salami, N.; Shokri, A. A.; Elahi, S. M.

    2016-03-01

    Electronic and magnetic properties of a molybdenum disulfide (MoS2) monolayer with some intrinsic and extrinsic vacancies are investigated using ab initio method in the presence of planar strain distributions. The calculations are carried out within the density functional theory (DFT) as implemented in SIESTA package. By using fully relaxed structures and applying a full spin-polarized description to the system, we concentrate on created magnetic moment due to the vacancies under different planar strains. The results show that the extrinsic MoS6 vacancy induces a net magnetic moment of 6.00 μB per supercell. Also, it is found that the pure MoS2 monolayer for the most cases does not show any magnetic properties under the planar strain. While the net magnetic moment of MoS2 monolayer with the vacancies enhances as the planar tensile strain is applied. The tunable magnetic moment of MoS2 monolayer may be utilized for the development of spintronic and flexible electronic nano-devices.

  12. Effect of chain length on the adhesion behaviour of n-alkanethiol self-assembled monolayers on Au(1 1 1): An atomic force microscopy study

    Indian Academy of Sciences (India)

    S Subramanian; S Sampath

    2005-10-01

    The effect of chain length on the adhesion behaviour of n-alkanethiols CH3(CH2) SH, where = 5, 6, 7, 9, 10, 11, 14 and 15 has been followed by carrying out pull-off force measurement using atomic force microscopy (AFM). The self-assembled monolayers on Au(111) surface has been characterized by reflection absorption infra-red spectroscopy (RAIRS) and contact mode AFM. It is observed that the work of adhesion is independent of thiol chain length though the standard deviation is high for short chain length thiol-based monolayers. This may be attributed to the relatively more deformable nature of the short chain thiol films due to their heterogeneity in the monolayer structure than the long chain ones. This, in turn, increases the contact area/volume between the AFM tip and the monolayer, and hence the force of adhesion. However, in the presence of water, the force of adhesion is lower than that observed in air reflecting the effects of capillary forces/polar components associated with the surface energy.

  13. Electronic structures and elastic properties of monolayer and bilayer transition metal dichalcogenides MX2 (M = Mo, W; X = O, S, Se, Te): A comparative first-principles study

    Science.gov (United States)

    Zeng, Fan; Zhang, Wei-Bing; Tang, Bi-Yu

    2015-09-01

    First-principle calculations with different exchange-correlation functionals, including LDA, PBE, and vdW-DF functional in the form of optB88-vdW, have been performed to investigate the electronic and elastic properties of two-dimensional transition metal dichalcogenides (TMDCs) with the formula of MX2(M = Mo, W; X = O, S, Se, Te) in both monolayer and bilayer structures. The calculated band structures show a direct band gap for monolayer TMDCs at the K point except for MoO2 and WO2. When the monolayers are stacked into a bilayer, the reduced indirect band gaps are found except for bilayer WTe2, in which the direct gap is still present at the K point. The calculated in-plane Young moduli are comparable to that of graphene, which promises possible application of TMDCs in future flexible and stretchable electronic devices. We also evaluated the performance of different functionals including LDA, PBE, and optB88-vdW in describing elastic moduli of TMDCs and found that LDA seems to be the most qualified method. Moreover, our calculations suggest that the Young moduli for bilayers are insensitive to stacking orders and the mechanical coupling between monolayers seems to be negligible. Project supported by the Construct Program of the Key Discipline in Hunan Province, China and Aid Program for Science and Technology Innovative Research Team in Higher Educational Institutions of Hunan Province, China.

  14. Collective cell motion in endothelial monolayers

    International Nuclear Information System (INIS)

    Collective cell motility is an important aspect of several developmental and pathophysiological processes. Despite its importance, the mechanisms that allow cells to be both motile and adhere to one another are poorly understood. In this study we establish statistical properties of the random streaming behavior of endothelial monolayer cultures. To understand the reported empirical findings, we expand the widely used cellular Potts model to include active cell motility. For spontaneous directed motility we assume a positive feedback between cell displacements and cell polarity. The resulting model is studied with computer simulations and is shown to exhibit behavior compatible with experimental findings. In particular, in monolayer cultures both the speed and persistence of cell motion decreases, transient cell chains move together as groups and velocity correlations extend over several cell diameters. As active cell motility is ubiquitous both in vitro and in vivo, our model is expected to be a generally applicable representation of cellular behavior

  15. Nisin Z, mutant nisin Z and lacticin 481 interactions with anionic lipids correlate with antimicrobial activity. A monolayer study

    NARCIS (Netherlands)

    Demel, Rudolf A.; Peelen, Tamara; Siezen, Roland J.; Kruijff, Ben de; Kuipers, Oscar P.

    1996-01-01

    Monomolecular layers of lipids at the air/water interface have been used as a model membrane to study membrane interactions of the lantibiotic nisin. The natural lantibiotics nisin A and nisin Z proved to have a high affinity for the anionic lipids phosphatidylglycerol and bis(phosphatidyl)glycerol

  16. Perspective: What is known, and not known, about the connections between alkane oxidation and metal uptake in alkanotrophs in the marine environment

    Science.gov (United States)

    Kenney, Grace E.; Rosenzweig, Amy C.

    2014-01-01

    Article Summary Should iron and copper be added to the environment to stimulate the natural bioremediation of marine oil spills? The key enzymes that catalyze the oxidation of alkanes require either iron or copper, and the concentration of these ions in seawater is vanishingly low. Nevertheless, the dependence of alkane oxidation activity on external metal concentrations remains unclear. This perspective will summarize what is known about the co-regulation of alkane oxidation and metal acquisition and pose a series of critical questions to which, for the most part, we do not yet have answers. The paucity of answers points to the need for additional studies to illuminate the cellular biology connecting microbial growth on alkanes to the acquisition of metal ions. PMID:24710692

  17. Molecular dynamics simulation of diffusion and structure of some n-alkanes in near critical and supercritical carbon dioxide at infinite dilution.

    Science.gov (United States)

    Feng, Huajie; Gao, Wei; Sun, Zhenfan; Lei, Bingxin; Li, Gaonan; Chen, Liuping

    2013-10-17

    The diffusion coefficients of n-alkanes (from CH4 to C14H30) in near critical and supercritical carbon dioxide at infinite dilution have been studied by molecular dynamics simulation. The simulation results agree well with experiment, which suggests that the simulation method is a powerful tool to obtain diffusion coefficients of solutes in fluids at high pressures. The local structures of such fluids are further investigated by calculating radial distribution functions and coordination numbers. Meanwhile, the dihedral, end-to-end distance and radius of gyration, which are calculated to characterize the flexibility of n-alkanes, are used to reasonably explain the abnormal trends on radial distribution functions and coordination numbers. Moreover, it is found that the flexibility effects on diffusion in pure n-alkanes and infinitely dilute n-alkane/CO2 system are different. The differences in MD simulation results of molecular diffusion in such systems could be qualitatively explained by the flexibility.

  18. Studies of endothelial monolayer formation on irradiated poly-L-lactide acid with ions of different stopping power and velocity

    Science.gov (United States)

    Arbeitman, Claudia R.; del Grosso, Mariela F.; Ibañez, Irene L.; Behar, Moni; Grasselli, Mariano; Bermúdez, Gerardo García

    2015-12-01

    In this work we study cell viability, proliferation and morphology of bovine aortic endothelial cells (BAEC) cultured on poly-L-lactide acid (PLLA) modified by heavy ion irradiation. In a previous study comparing ions beams with the same stopping power we observed an increase in cell density and a better cell morphology at higher ion velocities. In the present work we continued this study using heavy ions beam with different stopping power and ion velocities. To this end thin films of 50 μm thickness were irradiated with 2 MeV/u and 0.10 MeV/u ion beams provided the Tandar (Buenos Aires, Argentina) and Tandetron (Porto Alegre, Brazil) accelerators, respectively. The results suggest that a more dense and elongated cell shapes, similar to the BAEC cells on the internal surface of bovine aorta, was obtained for stopping power of 18.2-22.1 MeV cm2 mg-1 and ion velocity of 2 MeV/u. On the other hand, for low ion velocity 0.10 MeV/u the cells present a more globular shapes.

  19. Electrostatic cluster formation in lipid monolayers

    OpenAIRE

    Ellenbroek, Wouter G.; Wang, Yu-Hsiu; Christian, David A.; Discher, Dennis E.; Janmey, Paul A.; Liu, Andrea J.

    2010-01-01

    We study phase separation in mixed monolayers of neutral and highly negatively charged lipids, induced by the addition of divalent positively charged counterions. We find good agreement between experiments on mixtures of pip2 and sopc and simulations of a simplified model in which only the essential electrostatic interactions are retained. Thus, our results support an interpretation of pip2 clustering as governed primarily by electrostatic interactions, in which divalent ions such as calcium ...

  20. Laser-Induced Spallation of Microsphere Monolayers

    OpenAIRE

    Hiraiwa, Morgan; Stossel, Melicent; Khanolkar, Amey; Wang, Junlan; Boechler, Nicholas

    2016-01-01

    The detachment of a semi-ordered monolayer of polystyrene microspheres adhered to an aluminum-coated glass substrate is studied using a laser-induced spallation technique. The microsphere-substrate adhesion force is estimated from substrate surface displacement measurements obtained using optical interferometry, and a rigid-body model that accounts for the inertia of the microspheres. The estimated adhesion force is compared with estimates obtained from interferometric measurement of the out-...

  1. Phospholipid interactions in model membrane systems. I. Experiments on monolayers.

    OpenAIRE

    Mingins, J; Stigter, D; Dill, K A

    1992-01-01

    We study the lateral headgroup interactions among phosphatidylcholine (PC) molecules and among phosphatidylethanolamine (PE) molecules in monolayers and extend our previous models. In this paper, we present an extensive set of pressure-area isotherms and surface potential experiments on monolayers of phospholipids ranging from 14 to 22 carbons in length at the n-heptane/water interface, over a wide range of temperature, salt concentration, and pH on the acid side. The pressure data presented ...

  2. Magnetic Behaviour of Antiferromagnetic Monolayer under an External Field

    Institute of Scientific and Technical Information of China (English)

    黄晨; 王怀玉; 王恩哥

    2003-01-01

    Magnetic behaviour of antiferromagnetic monolayer under external field is studied. This is the first time to calculate all components of spin statistical average of an antiferromagnetic system with the random-phase approximation. To do so, a method is developed by many-body Green's function theory. Magnetization and susceptibility are investigated when external field is applied in either the x- or z-direction. The results are compared with the ferromagnetic monolayer.

  3. In vitro and in vivo characterization of antibacterial activity and biocompatibility: a study on silver-containing phosphonate monolayers on titanium.

    Science.gov (United States)

    Tîlmaciu, Carmen-Mihaela; Mathieu, Marc; Lavigne, Jean-Philippe; Toupet, Karine; Guerrero, Gilles; Ponche, Arnaud; Amalric, Julien; Noël, Danièle; Mutin, P Hubert

    2015-03-01

    Infections associated with implanted medical devices are a major cause of nosocomial infections, with serious medical and economic repercussions. A variety of silver-containing coatings have been proposed to decrease the risk of infection by hindering bacterial adhesion and biofilm formation. However, the therapeutic range of silver is relatively narrow and it is important to minimize the amount of silver in the coatings, in order to keep sufficient antibacterial activity without inducing cytotoxicity. In this study, the antibacterial efficiency and biocompatibility of nanocoatings with minimal silver loading (∼0.65 nmol cm(-2)) was evaluated in vitro and in vivo. Titanium substrates were coated by grafting mercaptododecylphosphonic acid (MDPA) monolayers followed by post-reaction with AgNO3. The MDPA/AgNO3 nanocoatings significantly inhibited Escherichia coli and Staphylococcus epidermidis adhesion and biofilm formation in vitro, while allowing attachment and proliferation of MC3T3-E1 preosteoblasts. Moreover, osteogenic differentiation of MC3T3 cells and murine mesenchymal stem cells was not affected by the nanocoatings. Sterilization by ethylene oxide did not alter the antibacterial activity and biocompatibility of the nanocoatings. After subcutaneous implantation of the materials in mice, we demonstrated that MDPA/AgNO3 nanocoatings exhibit significant antibacterial activity and excellent biocompatibility, both in vitro and in vivo, after postoperative seeding with S. epidermidis. These results confirm the interest of coating strategies involving subnanomolar amounts of silver exposed at the extreme surface for preventing bacterial adhesion and biofilm formation on metallic or ceramic medical devices without compromising their biocompatibility. PMID:25562573

  4. Measurement of thermodiffusion coefficient in n-alkane binary mixtures: composition dependence.

    Science.gov (United States)

    Madariaga, J A; Santamaría, C; Bou-Ali, M Mounir; Urteaga, P; Alonso De Mezquia, D

    2010-05-27

    In this work, we have measured the thermodiffusion coefficient of different n-alkane binary mixtures at several concentrations using the thermogravitational technique. In particular, we have studied the n-dodecane/n-heptane system as a function of composition and other systems covering a large range of mass differences and concentration at 25 degrees C and 1 atm. The results show that for any concentration the thermodiffusion coefficient of n-alkane mixtures is proportional to the mass difference between the components and to the ratio of the thermal expansion coefficient and viscosity of the mixture. The obtained equation allows us to determine the infinite dilution values of the thermodiffusion coefficient. We compare these values with recent experimental results in dilute polymer solutions and analyze the Brenner theory of thermodiffusion. Finally, it is shown that the thermodiffusion coefficient depends linearly with the mass fraction, and it can be calculated from the viscosity and thermal expansion of the pure components. PMID:20429569

  5. Calculations of gamma-ray spectral profiles of linear alkanes in the positron annihilation process

    CERN Document Server

    Ma, X G

    2014-01-01

    The positron-electron annihilation gamma-ray spectra of linear alkanes CnH2n+2 (n=1-12) have been studied systematically. A profile quality (PQ) parameter, is introduced to assess the agreement between the obtained theoretical profiles and the experimental measurements in the entire region of energy shift of the spectra. Together with the Doppler shift of the gamma-ray spectra, the two parameters,PQ and Doppler shift, are able to provide a more comprehensive assessment of the calculated gamma-ray spectra with respect to available experiment. Applying the recently developed docking model, the present study determines the positrophilic electrons for individual alkanes from which the gamma-ray spectral profiles are calculated. The results achieve an excellent agreement with experiment, not only with respect to the Doppler shift, but also with respect to the gamma-ray profiles in the photon energy region up to 5 keV. The study further calculates the gamma-ray spectra of other linear alkanes in the series without ...

  6. Massive endocytosis driven by lipidic forces originating in the outer plasmalemmal monolayer: a new approach to membrane recycling and lipid domains

    OpenAIRE

    Fine, Michael; Llaguno, Marc C.; Lariccia, Vincenzo; Lin, Mei-Jung; Yaradanakul, Alp; Hilgemann, Donald W.

    2011-01-01

    The roles that lipids play in endocytosis are the subject of debate. Using electrical and imaging methods, we describe massive endocytosis (MEND) in baby hamster kidney (BHK) and HEK293 cells when the outer plasma membrane monolayer is perturbed by the nonionic detergents, Triton X-100 (TX100) and NP-40. Some alkane detergents, the amphipathic drugs, edelfosine and tamoxifen, and the phospholipase inhibitor, U73122, are also effective. Uptake of the membrane tracer, FM 4–64, into vesicles and...

  7. Stability and properties of the two-dimensional hexagonal boron nitride monolayer functionalized by hydroxyl (OH) radicals: a theoretical study.

    Science.gov (United States)

    Wang, Hong-mei; Liu, Yue-jie; Wang, Hong-xia; Zhao, Jing-xiang; Cai, Qing-hai; Wang, Xuan-zhang

    2013-12-01

    Motivated by the great advance in graphene hydroxide--a versatile material with various applications--we performed density functional theory (DFT) calculations to study the functionalization of the two-dimensional hexagonal boron nitride (h-BN) sheet with hydroxyl (OH) radicals, which has been achieved experimentally recently. Particular attention was paid to searching for the most favorable site(s) for the adsorbed OH radicals on a h-BN sheet and addressing the roles of OH radical coverage on the stability and properties of functionalized h-BN sheet. The results indicate that, for an individual OH radica, the most stable configuration is that it is adsorbed on the B site of the h-BN surface with an adsorption energy of -0.88 eV and a magnetic moment of 1.00 μ(B). Upon adsorption of more than one OH radical on a h-BN sheet, however, these adsorbates prefer to adsorb in pairs on the B and its nearest N atoms from both sides of h-BN sheet without magnetic moment. An energy diagram of the average adsorption energy of OH radicals on h-BN sheet as a function of its coverage indicates that when the OH radical coverage reaches to 60 %, the functionalized h-BN sheet is the most stable among all studied configurations. More importantly, this configuration exhibits good thermal and dynamical stability at room temperature. Owing to the introduction of certain impurity levels, the band gap of h-BN sheet gradually decreases with increasing OH coverage, thereby enhancing its electrical conductivity.

  8. Young's modulus of a solid two-dimensional Langmuir monolayer

    Science.gov (United States)

    Bercegol, H.; Meunier, J.

    1992-03-01

    LANGMUIR monolayers-films of amphiphilic molecules at the surface of water-exhibit many phases1,2. Some of these behave like two-dimensional solids on experimental timescales, but previous measurements of the shear modulus of these 'solid' monolayers3-5 have yielded a value too small to be compatible with a two-dimensional crystal. The interpretation of these is complicated, however, by the likelihood of inhomogeneities in the films, which are probably assemblies of microscopic crystalline domains. Here we describe measurements of the Young's modulus of an isolated "solid' domain of NBD-stearic acid monolayers. We obtain a value large enough to be compatible with the modulus of a two-dimensional crystal6-8. This suggests that Langmuir monolayers should provide model systems for studies of melting in two dimensions6-8.

  9. Tribological properties of OTS self-assembled monolayers

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    Octadecyltrichlorosilane (OTS) self-assembled monolayers (SAMs)were prepared on the substrates of silicon and glass. The tribological properties were tested with a self-made point-contact pure sliding micro tribometer. The effect of humidity on the tribological properties of both OTS SAMs and the naked substrates were studied. When the substrate is covered by OTS monolayer, the friction coefficient is reduced from 0.5 to 0.1 and the stick-slip phenomenon is weakened. OTS monolayer can keep its friction coefficient steady in a wide range of humidity, because it is highly hydrophobic and thus not sensitive to humidity. In addition, the OTS monolayer has a considerable anti-wear ability.

  10. Epitaxial growth by monolayer restricted galvanic displacement

    Directory of Open Access Journals (Sweden)

    Vasilić Rastko

    2012-01-01

    Full Text Available The development of a new method for epitaxial growth of metals in solution by galvanic displacement of layers pre-deposited by underpotential deposition (UPD was discussed and experimentally illustrated throughout the lecture. Cyclic voltammetry (CV and scanning tunneling microscopy (STM are employed to carry out and monitor a “quasi-perfect”, two-dimensional growth of Ag on Au(111, Cu on Ag(111, and Cu on Au(111 by repetitive galvanic displacement of underpotentially deposited monolayers. A comparative study emphasizes the displacement stoichiometry as an efficient tool for thickness control during the deposition process and as a key parameter that affects the deposit morphology. The excellent quality of layers deposited by monolayer-restricted galvanic displacement is manifested by a steady UPD voltammetry and ascertained by a flat and uniform surface morphology maintained during the entire growth process.

  11. Piezoelectric monolayers as nonlinear energy harvesters.

    Science.gov (United States)

    López-Suárez, Miquel; Pruneda, Miguel; Abadal, Gabriel; Rurali, Riccardo

    2014-05-01

    We study the dynamics of h-BN monolayers by first performing ab-initio calculations of the deformation potential energy and then solving numerically a Langevine-type equation to explore their use in nonlinear vibration energy harvesting devices. An applied compressive strain is used to drive the system into a nonlinear bistable regime, where quasi-harmonic vibrations are combined with low-frequency swings between the minima of a double-well potential. Due to its intrinsic piezoelectric response, the nonlinear mechanical harvester naturally provides an electrical power that is readily available or can be stored by simply contacting the monolayer at its ends. Engineering the induced nonlinearity, a 20 nm2 device is predicted to harvest an electrical power of up to 0.18 pW for a noisy vibration of 5 pN. PMID:24722065

  12. Saccharomyces cerevisiae SHSY detoxifies petroleum n-alkanes by an induced CYP52A58 and an enhanced order in cell surface hydrophobicity.

    Science.gov (United States)

    Hanano, Abdulsamie; Shaban, Mouhnad; Almousally, Ibrahem; Al-Ktaifani, Mahmoud

    2015-09-01

    Environmental hydrocarbon contamination has a serious hazard to human health. Alkanes, the major component of hydrocarbons, can be consumed by various species of yeast. We previously identified a new strain SHSY of Saccharomyces cerevisiae with a remarkable ability to utilize the petroleum crude-oil (PCO) in aqueous solution. The current study demonstrated that the n-alkanes-assimilation activity of S. cerevisiae SHSY was related to an induced microsomal protein of 59 kDa approximately. The identified ORF encoded a protein of 517 amino acids and shared 93% sequence identity with an alkane-inducible hydroxylase CYP52A53 isolated from Scheffersomyces stipitis CBS. It was therefore referred as CYP52A58. The catalytic activity of the recombinant CYP52A58 was confirmed by the hydroxylation of n-alkanes, it showed an optimal mono-terminal hydroxylation activity toward n-hexadecane. Moreover, the ability of the yeast to use n-alkanes was accompanied with an increasing level in cell wall mannoproteins. Two differential protein bands were detected in the mannoproteins extracted from PCO-grown yeast. In parallel, a significant increase in the fatty acids content with a high degree of unsaturation was subsequently detected in the PCO-grown yeast. This study characterizes a safe and potential microorganism to remove n-alkanes from the aquatic environment. PMID:25434275

  13. Molecular dynamics simulations of layers of linear and branched alkanes under shear

    Science.gov (United States)

    Soza, P.; Hansen, F. Y.; Taub, H.; Volkmann, U. G.

    2008-03-01

    We have previously studied the equilibrium structure and dynamical excitations in films of the linear alkane tetracosane (n-C24H50) and the branched alkane squalane (C30H62) in great detail^2. Here we report the results of nonequilibrium molecular dynamics simulations of these systems in order to compare the rheological properties of alkanes of the same length but with different architecture. The simulations were done in the NVT ensemble using the reverse nonequilibrium algorithm proposed by F. Müller-Plathe et al.^3. The viscosity was calculated for different shear rates and compared with experimental values. Different structural parameters such as the mean end-to-end distance, the radius of gyration, and the angle of alignment of the molecules with the flow were studied as a function of the shear rate. ^2A.D. Enevoldsen et al., J. Chem. Phys. 126, 104703-10 (2007); 126, 104704-17 (2007). ^3F. Müller-Plathe et al., Phys. Rev. E, 59, 4894 (1998)

  14. Fully atomistic molecular-mechanical model of liquid alkane oils: Computational validation.

    Science.gov (United States)

    Zahariev, Tsvetan K; Slavchov, Radomir I; Tadjer, Alia V; Ivanova, Anela N

    2014-04-15

    Fully atomistic molecular dynamics simulations were performed on liquid n-pentane, n-hexane, and n-heptane to derive an atomistic model for middle-chain-length alkanes. All simulations were based on existing molecular-mechanical parameters for alkanes. The computational protocol was optimized, for example, in terms of thermo- and barostat, to reproduce properly the properties of the liquids. The model was validated by comparison of thermal, structural, and dynamic properties of the normal alkane liquids to experimental data. Two different combinations of temperature and pressure coupling algorithms were tested. A simple differential approach was applied to evaluate fluctuation-related properties with sufficient accuracy. Analysis of the data reveals a satisfactory representation of the hydrophobic systems behavior. Thermodynamic parameters are close to the experimental values and exhibit correct temperature dependence. The observed intramolecular geometry corresponds to extended conformations domination, whereas the intermolecular structure demonstrates all characteristics of liquid systems. Cavity size distribution function was calculated from coordinates analysis and was applied to study the solubility of gases in hexane and heptane oils. This study provides a platform for further in-depth research on hydrophobic solutions and multicomponent systems.

  15. Growth factor controls on the distribution and carbon isotope composition of n-alkanes in leaf wax

    Science.gov (United States)

    Jia, C.; Xie, S.; Huang, X.

    2012-12-01

    Cuticular wax plays pivotal physiological and ecological roles in the interactions between plants and the environments in which they grow. Plant-derived long-chain alkanes are more resistant to decay than other biochemical polymers. n-Alkane distributions (Carbon Preference Index (CPI) values and Average Chain Length (ACL) values) and carbon isotopic values are used widely in palaeoenvironmental reconstruction. However, there is little information available on how growth stages of the plant might influence the abundance of n-alkanes in the natural environment. In this study, we analyzed n-alkane distributions and carbon isotope data from two tree species (Cinnamomum camphora (L.) Presl. and Liquidambar formosana Hance) collected monthly from 2009 to 2011 in Nanwang Shan, Wuhan, Hubei Province. CPI values for n-alkanes from C. camphora remained stable in autumn and winter but fluctuated dramatically during spring and autumn each year. Positive correlations between CPI values and the relative content of (C27+C29) were observed in both sun and shade leaves of C. camphora from April to July. In L. formosana, CPI values decreased gradually from April to December. A similar trend was observed in all three years suggesting that growth stages rather than temperature or relative humidity affected the CPI values on a seasonal timescale. In the samples of L. formosana ACL values were negatively correlated with CPI values in the growing season (from April to July) and positively correlated with CPI values in the other seasons. The δ13C values of C29 and C31 n-alkanes displayed more negative carbon isotopic values in autumn and winter compared with leaves sampled at the start of the growing season from both trees. The δ13C values of C29 and C31 n-alkanes of L. formosana decreased from April to December. These results demonstrate the importance of elucidating the growing factors that influence the distribution and δ13C values of alkanes in modern leaves prior to using CPI

  16. Fossil Leaves and Fossil Leaf n-Alkanes: Reconstructing the First Closed Canopied Rainforests

    Science.gov (United States)

    Graham, H. V.; Freeman, K. H.

    2013-12-01

    characteristics associated with canopy effect. A biomass flux-weighted model of alkane chain-length distribution and δ13Cleaf indicate n-alkanes extracted from bulk rock are consistent with inputs integrated over time from plants represented by fossil leaves. In a modern rainforest, we found leaf lipid amounts markedly higher in the shaded and moist understory, consistent with studies that show alkanes proffer fungal protection. Shade tolerance is associated with higher plant orders and, consistent with this, literature data for modern plants from 30 plant orders shows alkane production in asterids and rosids is 2 to 3 times greater than in basal angiosperms or gymnosperms. The lower clades tend to contain greater amounts of terpenoids and novel benzylisoquinoline alkaloids, rather than alkanes. For our three fossil floras, alkane abundance is strongly influenced by depositional setting, with preservation best in the lacustrine setting. Within each site, abundance patterns are potentially influenced by both taxonomic affiliation and by canopy structure as measured by δ13Cleaf values, and such relationships shed light on the combined influences of plant evolution, canopy structure and the function of biochemical resources on the geochemical record of the first rainforests.

  17. Monolayer arrangement of fatty hydroxystearic acids on graphite: Influence of hydroxyl groups

    Energy Technology Data Exchange (ETDEWEB)

    Medina, S. [Laboratorio de Rayos-X, Centro de Investigación Tecnología e Innovación, de la Universidad de Sevilla (CITIUS), Universidad de Sevilla, Avenida Reina Mercedes, 4B. 41012, Sevilla (Spain); Benítez, J.J.; Castro, M.A. [Instituto de Ciencia de Materiales de Sevilla, Consejo Superior de Investigaciones Científicas-Universidad de Sevilla, Avenida Américo Vespucio, 49. 41092, Sevilla (Spain); Cerrillos, C. [Servicio de Microscopía, Centro de Investigación Tecnología e Innovación, de la Universidad de Sevilla (CITIUS), Universidad de Sevilla, Avenida Reina Mercedes, 4B. 41012, Sevilla (Spain); Millán, C. [Instituto de Ciencia de Materiales de Sevilla, Consejo Superior de Investigaciones Científicas-Universidad de Sevilla, Avenida Américo Vespucio, 49. 41092, Sevilla (Spain); Alba, M.D., E-mail: alba@icmse.csic.es [Instituto de Ciencia de Materiales de Sevilla, Consejo Superior de Investigaciones Científicas-Universidad de Sevilla, Avenida Américo Vespucio, 49. 41092, Sevilla (Spain)

    2013-07-31

    Previous studies have indicated that long-chain linear carboxylic acids form commensurate packed crystalline monolayers on graphite even at temperatures above their melting point. This study examines the effect on the monolayer formation and structure of adding one or more secondary hydroxyl, functional groups to the stearic acid skeleton (namely, 12-hydroxystearic and 9,10-dihydroxystearic acid). Moreover, a comparative study of the monolayer formation on recompressed and monocrystalline graphite has been performed through X-ray diffraction (XRD) and Scanning Tunneling Microscopy (STM), respectively. The Differential Scanning Calorimetry (DSC) and XRD data were used to confirm the formation of solid monolayers and XRD data have provided a detailed structural analysis of the monolayers in good correspondence with obtained STM images. DSC and XRD have demonstrated that, in stearic acid and 12-hydroxystearic acid adsorbed onto graphite, the monolayer melted at a higher temperature than the bulk form of the carboxylic acid. However, no difference was observed between the melting point of the monolayer and the bulk form for 9,10-dihydroxystearic acid adsorbed onto graphite. STM results indicated that all acids on the surface have a rectangular p2 monolayer structure, whose lattice parameters were uniaxially commensurate on the a-axis. This structure does not correlate with the initial structure of the pure compounds after dissolving, but it is conditioned to favor a) hydrogen bond formation between the carboxylic groups and b) formation of hydrogen bonds between secondary hydroxyl groups, if spatially permissible. Therefore, the presence of hydroxyl functional groups affects the secondary structure and behavior of stearic acid in the monolayer. - Highlights: • Hydroxyl functional groups affect structure and behavior of acids in the monolayer. • Acids on the surface have a rectangular p2 monolayer structure. • Lattice parameters of acids are uniaxially

  18. Polymer Adsorption on Graphite and CVD Graphene Surfaces Studied by Surface-Specific Vibrational Spectroscopy.

    Science.gov (United States)

    Su, Yudan; Han, Hui-Ling; Cai, Qun; Wu, Qiong; Xie, Mingxiu; Chen, Daoyong; Geng, Baisong; Zhang, Yuanbo; Wang, Feng; Shen, Y R; Tian, Chuanshan

    2015-10-14

    Sum-frequency vibrational spectroscopy was employed to probe polymer contaminants on chemical vapor deposition (CVD) graphene and to study alkane and polyethylene (PE) adsorption on graphite. In comparing the spectra from the two surfaces, it was found that the contaminants on CVD graphene must be long-chain alkane or PE-like molecules. PE adsorption from solution on the honeycomb surface results in a self-assembled ordered monolayer with the C-C skeleton plane perpendicular to the surface and an adsorption free energy of ∼42 kJ/mol for PE(H(CH2CH2)nH) with n ≈ 60. Such large adsorption energy is responsible for the easy contamination of CVD graphene by impurity in the polymer during standard transfer processes. Contamination can be minimized with the use of purified polymers free of PE-like impurities.

  19. Structures of a 17,19-hexatriacontadiyne and sashlike polydiacetylene monolayer on MoS2(0001) studied by UHV-STM

    International Nuclear Information System (INIS)

    We have observed a 17,19-hexatriacontadiyne (HTDY) monolayer on MoS2(0001) and sashlike polydiacetylene atomic sash (AS) molecules derived from the monolayer by scanning tunnelling microscopy under ultrahigh vacuum. HTDY molecules adsorbed at 150 K start to move around on the surface above 240 K to form relatively unstable columnar structures. The column is converted into the AS by UV irradiation. In most AS molecules on MoS2(0001), the alkyl chains are in all-trans conformation but their carbon planes are tilted to the polydiacetylene backbone. This conformer, which is one of the most stable structures for an isolated AS molecule, appears on MoS2(0001) because of very weak molecule-substrate interactions

  20. Nanoencapsulation of n-alkanes with poly(styrene-co-ethylacrylate) shells for thermal energy storage

    International Nuclear Information System (INIS)

    Highlights: • Four series of nanocapsules containing n-alkanes were synthesized in poly(styrene-co-ethylacrylate). • The emulsion co-polymerization technique was used. • Influence of core:shell ratio on encapsulation and thermal properties reported. - Abstract: In this work, we synthesized a series of four nanocapsules containing n-alkanes (CnH2n+2), namely tetradecane, pentadecane, hexadecane, and heptadecane, in poly(styrene-co-ethylacrylate) using an emulsion copolymerization method. The nanocapsules were characterized according to their geometric profiles, phase transition temperatures, phase transition heats, mean particle sizes, and chemical stabilities by means of scanning electron microscopy, differential scanning calorimetry, thermal gravimetric analysis and Fourier transform infrared spectroscopy. Furthermore, we also focused on the effect of the core/shell mass ratio on the phase change properties of the nanocapsules. We found that microcapsules were synthesized successfully and that the best core/shell mass ratio was 3:1 for this study. These results indicate that encapsulated n-alkanes with poly(styrene-co-ethylacrylate) have an excellent potential for energy storage

  1. Induction and development of the oil emulsifying system in an alkane oxidizing Rhodococcus species

    International Nuclear Information System (INIS)

    There is a potential use of oil emulsifying bacteria for the clean-up of oil-contaminated natural environments, and oil transport and storage systems. The control mechanisms of the emulsifying abilities in these bacteria are important in relation to the optimization of such processes. A study was conducted to investigate the physiological criteria for the formation of the emulsifying activity in Rhodococcus sp. strain 094, which forms a hydrophobic cell surface when cultivated on alkanes, permitting oil-associated exponential growth. The ability of this bacteria to produce oil emulsifying agents is clearly inducible by crude oil or a number of single hydrophobic compounds. Before the cells are able to emulsify the oil, they must pass through a relatively short induction period followed by a longer period of synthesis of hydrophobic surface parts, coinciding with cell proliferation. The latter is due to the required coordination with new cell wall synthesis. If the cells are allowed to produce sufficient amounts of hydrophobic cell surface parts, they commence to emulsify the oil efficiently when the hydrophobic factor is released from the cell surface as part of their change to a more hydrophillic state. All the positive inducers were hydrophobic alkyl derivatives, and with one exception, also substrate for growth. Many of the better inducers were alkanes, and would require an alkane oxidizing system to be used by the cells. 14 ref., 2 tabs., 3 figs

  2. Exploring atomic defects in molybdenum disulphide monolayers

    KAUST Repository

    Hong, Jinhua

    2015-02-19

    Defects usually play an important role in tailoring various properties of two-dimensional materials. Defects in two-dimensional monolayer molybdenum disulphide may be responsible for large variation of electric and optical properties. Here we present a comprehensive joint experiment-theory investigation of point defects in monolayer molybdenum disulphide prepared by mechanical exfoliation, physical and chemical vapour deposition. Defect species are systematically identified and their concentrations determined by aberration-corrected scanning transmission electron microscopy, and also studied by ab-initio calculation. Defect density up to 3.5 × 10 13 cm \\'2 is found and the dominant category of defects changes from sulphur vacancy in mechanical exfoliation and chemical vapour deposition samples to molybdenum antisite in physical vapour deposition samples. Influence of defects on electronic structure and charge-carrier mobility are predicted by calculation and observed by electric transport measurement. In light of these results, the growth of ultra-high-quality monolayer molybdenum disulphide appears a primary task for the community pursuing high-performance electronic devices.

  3. Self-assembled monolayers of calix[4]arene derivatives on gold

    NARCIS (Netherlands)

    Huisman, Bart-Hendrik; Thoden van Velzen, Eggo U.; Veggel, van Frank C.J.M.; Engbersen, Johan F.J.; Reinhoudt, David N.

    1995-01-01

    Dialkylsulfide substituted calix[4]arenes were synthesized and adsorbed onto gold substrates. Infrared spectroscopy, thickness, and wettability studies revealed that well-ordered monolayers were formed.

  4. High Temperature Chemical Kinetic Combustion Modeling of Lightly Methylated Alkanes

    Energy Technology Data Exchange (ETDEWEB)

    Sarathy, S M; Westbrook, C K; Pitz, W J; Mehl, M

    2011-03-01

    Conventional petroleum jet and diesel fuels, as well as alternative Fischer-Tropsch (FT) fuels and hydrotreated renewable jet (HRJ) fuels, contain high molecular weight lightly branched alkanes (i.e., methylalkanes) and straight chain alkanes (n-alkanes). Improving the combustion of these fuels in practical applications requires a fundamental understanding of large hydrocarbon combustion chemistry. This research project presents a detailed high temperature chemical kinetic mechanism for n-octane and three lightly branched isomers octane (i.e., 2-methylheptane, 3-methylheptane, and 2,5-dimethylhexane). The model is validated against experimental data from a variety of fundamental combustion devices. This new model is used to show how the location and number of methyl branches affects fuel reactivity including laminar flame speed and species formation.

  5. A Quick Estimate of the Correlation Energy for Alkanes

    Institute of Scientific and Technical Information of China (English)

    黎书华; 李伟; 马晶

    2003-01-01

    Within the localized molecular orbital description, the intraand interorbital pair correlation energies calculated with the coupled cluster doubles (CCD) theory have been obtained for methane, ethane, propane, butane, isobutane, pentane,isopentane and neopentane using the 6-31G* basis set. The results showed the quantitative transferability of pair correlation energies and gross orbital correlation energies within this series of molecules. Based on the gross orbital correlation energies of five sample alkanes (butane, isobutane, pentane,isopentane and neopentane), we have derived a simple linear relationship to estimate the CCD correlation energy for an arbitrary large alkane. The correlation energy predicted by this simple relationship remarkably recovers more than 98.9% of the exact CCD correlation energy for a number of alkanes containing six to eight carbon atoms. The relative stability of less branched isomers can be correctly predicted.

  6. High Quality Factor Mechanical Resonators Based on WSe2 Monolayers.

    Science.gov (United States)

    Morell, Nicolas; Reserbat-Plantey, Antoine; Tsioutsios, Ioannis; Schädler, Kevin G; Dubin, François; Koppens, Frank H L; Bachtold, Adrian

    2016-08-10

    Suspended monolayer transition metal dichalcogenides (TMD) are membranes that combine ultralow mass and exceptional optical properties, making them intriguing materials for opto-mechanical applications. However, the low measured quality factor of TMD resonators has been a roadblock so far. Here, we report an ultrasensitive optical readout of monolayer TMD resonators that allows us to reveal their mechanical properties at cryogenic temperatures. We find that the quality factor of monolayer WSe2 resonators greatly increases below room temperature, reaching values as high as 1.6 × 10(4) at liquid nitrogen temperature and 4.7 × 10(4) at liquid helium temperature. This surpasses the quality factor of monolayer graphene resonators with similar surface areas. Upon cooling the resonator, the resonant frequency increases significantly due to the thermal contraction of the WSe2 lattice. These measurements allow us to experimentally study the thermal expansion coefficient of WSe2 monolayers for the first time. High Q-factors are also found in resonators based on MoS2 and MoSe2 monolayers. The high quality-factor found in this work opens new possibilities for coupling mechanical vibrational states to two-dimensional excitons, valley pseudospins, and single quantum emitters and for quantum opto-mechanical experiments based on the Casimir interaction. PMID:27459399

  7. Effect of temperature on the adsorption of short alkanes in the zeolite ssz-13-adapting adsorption isotherms to microporous materials

    NARCIS (Netherlands)

    Jiang, Tao; Göltl, Florian; Bulo, Rosa E.; Sautet, Philippe

    2014-01-01

    Understanding the diffusion and adsorption of hydrocarbons in zeolites is a highly important topic in the field of catalysis in micro-and mesoporous materials. Especially, the properties of alkanes in zeolites have been studied extensively. A theoretical description of these processes is challenging

  8. Characterization of phospholipid+semifluorinated alkane vesicle system.

    Science.gov (United States)

    Sabín, Juan; Ruso, Juan M; González-Pérez, Alfredo; Prieto, Gerardo; Sarmiento, Félix

    2006-01-15

    The aim of this study is to characterize vesicles obtained by the incorporation of the semifluorinated alkane, (perfluoro-n-hexyl)ethane (diblock F6H2) to a standard lipid, egg yolk phosphatidylcholine (PC). Large unilamellar vesicles (LUVs), prepared by extrusion, were characterized by fluorescence spectroscopy, zeta potential (zeta-potential) and light scattering. By using the fluorescence spectroscopy technique, the anisotropy of l,6-diphenyl-l,3,5-hexatriene (DPH) probe at different temperatures was determined. It was demonstrated that F6H2 is placed inside of the lipid bilayer and that the hydrocarbon acyl chain in the bilayers has higher viscosity in the presence of fluoroalkane. The zeta-potential of the PC-F6H2 system is negative and increases (in absolute value) from -10 to -19 mV when the temperature rises from 10 to 25 degrees C, this last value keeping practically constant with a further increase of temperature. The adsorption of K+ ions on the liposome surface was measured by zeta-potential. This adsorption originates a sudden increase of the initial zeta-potential followed by a slight decrease with K+ concentration. The application of the DLVO theory of colloidal stability showed a growing dependence of the DLVO potential with K+ concentration and consequently a increasing stability.

  9. On the relation between Zenkevich and Wiener indices of alkanes

    Directory of Open Access Journals (Sweden)

    ZARKO BOSKOVIC

    2004-04-01

    Full Text Available A relatively complicated relation was found to exist between the quantity U, recently introduced by Zenkevich (providing a measure of internal molecular energy, and the Wiener index W (measuring molecular surface area and intermolecular forces. We now report a detailed analysis of this relation and show that, in the case of alkanes, its main features are reproduced by the formula U = –aW + b + gn1; where n1 is the number of methyl groups, and a, b and g are constants, depending only on the number of carbon atoms. Thus, for isomeric alkanes with the same number of methyl groups, U and W are linearly correlated.

  10. Squeezing molecular thin alkane lubrication films: layering transition and wear

    OpenAIRE

    Sivebæk, Ion Marius; Samoilov, V. N.; Persson, B. N. J.

    2003-01-01

    The properties of alkane lubricants confined between two approaching solids are investigated by a model that accounts for the curvature and the elastic properties of the solid surfaces. We consider linear alkane molecules of different chain lengths, C3H8, C4H10, C8H18, C9H20, C10H22, C12H26, and C14H30 confined between smooth gold surfaces. In most cases we observe well defined molecular layers develop in the lubricant film when the width of the film is of the order of a few atomic diameters....

  11. Regioselective alkane hydroxylation with a mutant AlkB enzyme

    Science.gov (United States)

    Koch, Daniel J.; Arnold, Frances H.

    2012-11-13

    AlkB from Pseudomonas putida was engineered using in-vivo directed evolution to hydroxylate small chain alkanes. Mutant AlkB-BMO1 hydroxylates propane and butane at the terminal carbon at a rate greater than the wild-type to form 1-propanol and 1-butanol, respectively. Mutant AlkB-BMO2 similarly hydroxylates propane and butane at the terminal carbon at a rate greater than the wild-type to form 1-propanol and 1-butanol, respectively. These biocatalysts are highly active for small chain alkane substrates and their regioselectivity is retained in whole-cell biotransformations.

  12. BIODEGRADATION AND GAS-EXCHANGE OF GASEOUS ALKANES IN MODEL ESTUARINE ECOSYSTEMS

    Science.gov (United States)

    Gas exchange-biodegradation experiments conducted in model estuarine ecosystems indicate that the ease of degradation of gaseious normal alkanes increases with chain length. The behavior of gaseous perhalogenated alkanes can be explained by gas exchange alone with no degradation....

  13. 40 CFR 721.785 - Halogenated alkane aromatic compound (generic name).

    Science.gov (United States)

    2010-07-01

    ... 40 Protection of Environment 30 2010-07-01 2010-07-01 false Halogenated alkane aromatic compound... Specific Chemical Substances § 721.785 Halogenated alkane aromatic compound (generic name). (a) Chemical... as a halogenated alkane aromatic compound (PMN P-94-1747) is subject to reporting under this...

  14. Selective conversion of butane into liquid hydrocarbon fuels on alkane metathesis catalysts

    KAUST Repository

    Szeto, Kaï Chung

    2012-01-01

    We report a selective direct conversion of n-butane into higher molecular weight alkanes (C 5+) by alkane metathesis reaction catalysed by silica-alumina supported tungsten or tantalum hydrides at moderate temperature and pressure. The product is unprecedented, asymmetrically distributed towards heavier alkanes. This journal is © 2012 The Royal Society of Chemistry.

  15. Surface energetics of freely suspended fluid molecular monolayer and multilayer smectic liquid crystal films

    OpenAIRE

    Nguyen, Zoom Hoang; Park, Cheol Soo; Pang, Jinzhong; Clark, Noel A.

    2012-01-01

    A study of the surface energetics of the thinnest substrate-free liquid films, fluid molecular monolayer and multilayer smectic liquid crystal films suspended in air, is reported. In films having monolayer and multilayer domains, the monolayer areas contract, contrary to predictions from the van der Waals disjoining pressure of thin uniform slabs. This discrepancy is accounted for by modeling the environmental asymmetry of the surface layers in multilayer films, leading to the possibility tha...

  16. Monolayers of lysolecithins and analogs

    NARCIS (Netherlands)

    Eibl, H.; Demel, R.A.; Deenen, L.L.M. van

    1969-01-01

    1) The interfacial characteristics of lysolecithins are highly dependent on chain length and unsaturation of the fatty acid chain. (Stearoyl) and (oleoyl) lysolecithins form stable monolayers with high collapse pressures (35 dynes/cm) whereas (palmitoyl) (myristoyl), and (linoleoyl) lysolecithin mon

  17. Broadband ultra-high transmission of terahertz radiation through monolayer MoS$_{2}$

    CERN Document Server

    Deng, Xue-Yong; Su, Fu-Hai; Liu, Nian-Hua; Liu, Jiang-Tao

    2015-01-01

    In this study, terahertz (THz) absorption and transmission of monolayer MoS$_{2}$ was calculated under different carrier concentrations. Results showed that the THz absorption of monolayer MoS$_{2}$ is very small even under high carrier concentrations and large incident angle. Equivalent loss of the THz absorption is the total sum of reflection and absorption that is one to three grades lower than that of graphene. The monolayer MoS$_{2}$ transmission is much larger than that of the traditional GaAs and InAs two-dimensional electron gas. The field-effect tubular structure formed by the monolayer MoS$_{2}$-insulation-layer-graphene is investigated. In this structure the THz absorption of graphene to reach saturation under low voltage. Meantime, the maximum THz absorption of monolayer MoS$_{2}$ was limited to approximately 5\\%. Thus, monolayer MoS$_{2}$ is a kind of ideal THz Transparent Electrodes.

  18. Alkane production by the marine cyanobacterium Synechococcus sp. NKBG15041c possessing the α-olefin biosynthesis pathway.

    Science.gov (United States)

    Yoshino, Tomoko; Liang, Yue; Arai, Daichi; Maeda, Yoshiaki; Honda, Toru; Muto, Masaki; Kakunaka, Natsumi; Tanaka, Tsuyoshi

    2015-02-01

    The production of alkanes in a marine cyanobacterium possessing the α-olefin biosynthesis pathway was achieved by introducing an exogenous alkane biosynthesis pathway. Cyanobacterial hydrocarbons are synthesized via two separate pathways: the acyl-acyl carrier protein (ACP) reductase/aldehyde-deformylating oxygenase (AAR/ADO) pathway for the alkane biosynthesis and the α-olefin synthase (OLS) pathway for the α-olefin biosynthesis. Coexistence of these pathways has not yet been reported. In this study, the marine cyanobacterium Synechococcus sp. NKBG15041c was shown to produce α-olefins similar to those of Synechococcus sp. PCC7002 via the α-olefin biosynthesis pathway. The production of heptadecane in Synechococcus sp. NKBG15041c was achieved by expressing the AAR/ADO pathway genes from Synechococcus elongatus PCC 7942. The production yields of heptadecane in Synechococcus sp. NKBG15041c varied with the expression level of the aar and ado genes. The maximal yield of heptadecane was 4.2 ± 1.2 μg/g of dried cell weight in the transformant carrying a homologous promoter. Our results also suggested that the effective activation of ADO may be more important for the enhancement of alkane production by cyanobacteria.

  19. Evidence that crude oil alkane activation proceeds by different mechanisms under sulfate-reducing and methanogenic conditions

    Science.gov (United States)

    Aitken, C. M.; Jones, D. M.; Maguire, M. J.; Gray, N. D.; Sherry, A.; Bowler, B. F. J.; Ditchfield, A. K.; Larter, S. R.; Head, I. M.

    2013-05-01

    Fumarate addition has been widely proposed as an initial step in the anaerobic oxidation of both aromatic and aliphatic hydrocarbons. Alkyl and aryl succinates have been reported as metabolites of hydrocarbon degradation in laboratory studies with both pure and enrichment cultures of sulfate-, nitrate-, and iron-reducing bacteria. In addition these compounds have been reported in samples from environments such as hydrocarbon contaminated aquifers where, in addition to the above redox processes, hydrocarbon degradation linked to methanogenesis was observed. Here we report data from anaerobic crude oil degrading microcosms which revealed significant differences between the acid metabolite profiles of crude oil degraded under sulfate-reducing or methanogenic conditions. Under sulfate-reducing conditions fumarate addition and the formation of alkylsuccinate metabolites was the principal mechanism for the anaerobic degradation of n-alkanes and branched chain alkanes. Other than alkyl succinates that represent indigenous metabolites in the sediment inoculum, alkyl succinate metabolites were never detected in sediment microcosms where methane generation was quantitatively linked to n-alkane degradation. This indicates that alternative mechanisms of alkane activation may operate under methanogenic conditions.

  20. Catalytic production of branched small alkanes from biohydrocarbons.

    Science.gov (United States)

    Oya, Shin-ichi; Kanno, Daisuke; Watanabe, Hideo; Tamura, Masazumi; Nakagawa, Yoshinao; Tomishige, Keiichi

    2015-08-10

    Squalane, C30 algae-derived branched hydrocarbon, was successfully converted to smaller hydrocarbons without skeletal isomerization and aromatization over ruthenium on ceria (Ru/CeO2 ). The internal CH2 CH2 bonds located between branches are preferably dissociated to give branched alkanes with very simple distribution as compared with conventional methods using metal-acid bifunctional catalysts.

  1. Improving alkane synthesis in Escherichia coli via metabolic engineering.

    Science.gov (United States)

    Song, Xuejiao; Yu, Haiying; Zhu, Kun

    2016-01-01

    Concerns about energy security and global petroleum supply have made the production of renewable biofuels an industrial imperative. The ideal biofuels are n-alkanes in that they are chemically and structurally identical to the fossil fuels and can "drop in" to the transportation infrastructure. In this work, an Escherichia coli strain that produces n-alkanes was constructed by heterologous expression of acyl-acyl carrier protein (ACP) reductase (AAR) and aldehyde deformylating oxygenase (ADO) from Synechococcus elongatus PCC7942. The accumulation of alkanes ranged from 3.1 to 24.0 mg/L using different expressing strategies. Deletion of yqhD, an inherent aldehyde reductase in E. coli, or overexpression of fadR, an activator for fatty acid biosynthesis, exhibited a nearly twofold increase in alkane titers, respectively. Combining yqhD deletion and fadR overexpression resulted in a production titer of 255.6 mg/L in E. coli, and heptadecene was the most abundant product.

  2. Integrated process for preparing a carboxylic acid from an alkane

    Energy Technology Data Exchange (ETDEWEB)

    Benderly, Abraham (Elkins Park, PA); Chadda, Nitin (Radnor, PA); Sevon, Douglass (Fairless Hills, PA)

    2011-12-20

    The present invention relates to an integrated process for producing unsaturated carboxylic acids from the corresponding C.sub.2-C.sub.4 alkane. The process begins with performance of thermally integrated dehydrogenation reactions which convert a C.sub.2-C.sub.4 alkane to its corresponding C.sub.2-C.sub.4 alkene, and which involve exothermically converting a portion of an alkane to its corresponding alkene by oxidative dehydrogenation in an exothermic reaction zone, in the presence of oxygen and a suitable catalyst, and then feeding the products of the exothermic reaction zone to an endothermic reaction zone wherein at least a portion of the remaining unconverted alkane is endothermically dehydrogenated to form an additional quantity of the same corresponding alkene, in the presence of carbon dioxide and an other suitable catalyst. The alkene products of the thermally integrated dehydrogenation reactions are then provided to a catalytic vapor phase partial oxidation process for conversion of the alkene to the corresponding unsaturated carboxylic acid or nitrile. Unreacted alkene and carbon dioxide are recovered from the oxidation product stream and recycled back to the thermally integrated dehydrogenation reactions.

  3. A superoleophobic textile repellent towards impacting drops of alkanes

    Science.gov (United States)

    Artus, Georg R. J.; Zimmermann, Jan; Reifler, Felix A.; Brewer, Stuart A.; Seeger, Stefan

    2012-02-01

    A commercially available polyester fabric has been rendered superoleophobic by coating with silicone nanofilaments and subsequent plasma fluorination. The treated samples show outstanding oil-repellency. They achieve the highest possible oil-repellency grade of 8, repel impacting drops of alkanes and show a plastron layer in hexadecane. The oil repellency is shown to depend on the topography of the silicone nanofilament coating.

  4. Confined thin films of linear and branched alkanes

    NARCIS (Netherlands)

    Dijkstra, Marjolein

    1997-01-01

    We report computer simulations in the Grand canonical ensemble of a system of several alkanes between two solid surfaces. We computed the solvation force exerted by the fluid on the plates. The solvation force for linear decane oscillates with distance with a periodicity close to the width of the mo

  5. A comparative study of structural and electronic properties of formaldehyde molecule on monolayer honeycomb structures based on vdW-DF prospective

    Science.gov (United States)

    Ganji, M. D.; Jameh-Bozorgi, S.; Rezvani, M.

    2016-10-01

    In order to develop the potential applications of monolayer sheets as gas sensors, the adsorption of formaldehyde (H2CO) molecule on graphene, hexagonal silicon carbide (h-SiC) as well as hexagonal aluminum nitride (h-AlN) monolayer sheets have been investigated. In this work we have used the so-called van der Waals density functional (vdW-DF) method. It was found that H2CO molecule adsorption on h-AlN nanosheet had relatively higher adsorption energy and shorter binding distance and finally much more reactive in the adsorption of H2CO compared with the h-SiC and graphene sheets. The density of states (DOS) was calculated and the results show that the highest occupied molecular orbital (HOMO)-lowest unoccupied molecular orbital (LUMO) energy gap of h-AlN and h-SiC sheets is significantly reduced upon the H2CO adsorption compared to the graphene which leads to an enhancement in the electrical conductivity of respective systems. We have evaluated these findings by well-known Mulliken as well as Hirshfeld and Voronoi charges analyses for aforementioned systems. The purpose of this work is to achieve deep insights into the influence of H2CO molecule on the electronic properties of h-AlN and h-SiC monolayer sheets, and how these effects could be used to design more sensitive gas sensing devices. Based on the DFT calculation results, the h-AlN and also h-h-SiC sheets are anticipated to be potential novel sensor for detecting the presence of H2CO toxic gas.

  6. Use of the N-alkanes to Estimate Intake, Apparent Digestibility and Diet Composition in Sheep Grazing on Stipa brevilfora Desert Steppe

    Institute of Scientific and Technical Information of China (English)

    HU Hong-lian; LIU Yong-zhi; LI Ya-kui; LU De-xun; GAO Min

    2014-01-01

    The application of n-alkane as markers to estimate herbage intake, apparent digestibility and species composition of diet consumed by grazing sheep was studied. Six local Mongolian sheep were used to determine dry matter (DM) intake, apparent DM digestibility and species composition of diet during summer, autumn and winter. Animals were orally dosed twice daily with n-alkane gelatin capsules containing 60 mg C32-alkane as an external marker. Diet composition was estimated by comparing the odd-chain n-alkanes pattern profile (C27-C31) of the consumed plant species with the n-alkanes fecal concentrations of grazing animals, using a non-negative least squares algorithm called EATWHAT software package. The alkane pair C32:C33 and C33 alkane were used to estimate DM intake and diet apparent DM digestibility, respectively. The results showed that daily dry matter intake of the sheep were 1.77, 1.61 and 1.18 kg d-1 in summer, autumn and winter, respectively. Apparent DM digestibility, crude protein (CP), metabolizable energy (ME) and neutral detergent ifber (NDF) intake of diet consumed by sheep decreased signiifcantly (P<0.01) from summer to winter, with no evident changes in ADF and ADL intake. Diet composition indicated Artemisia frigida Willd was the most dominant diet component, contributed 79.68, 68.12 and 86.26% of sheep’s diets in summer, autumn and winter, respectively. Cleistogenes songorica Ohwi and Convolvulus ammannii Desr were the important components of the diet. Although Stipa brevilfora Griseb is one of the main plant species in the study area, the sheep rarely choosed it. The study indicated that CP and ME in diet consumed by sheep were deifcient in winter. Therefore, appropriate supplementation strategies should be indispensable during this period.

  7. Dislocations in Monolayers and Semiconductors.

    Science.gov (United States)

    Ren, Qiang

    1995-01-01

    Four different aspects of the properties of dislocations in monolayer and semiconductors have been investigated: (i) Using atomic relaxation techniques, dislocation dipoles of various sizes and orientations have been studied for monolayers with the Lennard-Jones potential (LJP) and the nearest-neighbour piecewise linear force (PLF) interactions. In the WP system the lower energy vacancy dipoles have over a wide range of angles an energy which is mainly a function of the vacancy content of the dipole. There is a competition between the elastic forces and the topological constraints which favour a five-fold coordinate vacancy (FCV) at the centre of each core. For the short range PLF system the lattice usually compresses upon the introduction of a dislocation, a consequence of the soft core of the interaction potential, and interstitial dipoles are lower in energy. For the long range LJP system the dislocations are mobile whereas for the PLF system they are pinned. The relevance of these results to existing theories of melting are discussed. (ii) Using generalized stacking-fault (GSF) energies obtained from first-principles density-functional calculations, a zero-temperature model for dislocations in silicon is constructed within the framework of a Peierls-Nabarro (PN) model. Core widths, core energies, PN pinning energies, and stresses are calculated for various possible perfect and imperfect dislocations. Both shuffle and glide sets are considered. 90^circ partials are shown to have a lower Peierls stress (PS) than 30 ^circ partials in accord with experiment. (iii) We have also studied by atomic relaxation techniques the properties of dislocations in silicon, modelled by the empirical potential of Stillinger and Weber. In order to compare with the preceding calculation no reconstruction is allowed. We find no evidence of dissociation in the shuffle dislocations. Within this model shuffle dislocations glide along their slipping planes. On the other hand, glide sets

  8. What makes the T c of monolayer FeSe on SrTiO3 so high: a sign-problem-free quantum Monte Carlo study

    OpenAIRE

    Li, Zi-Xiang; Wang, Fa; Yao, Hong; Lee, Dung-Hai

    2016-01-01

    Monolayer FeSe films grown on SrTiO3 (STO) substrate show superconducting gap-opening temperatures ( \\documentclass[12pt]{minimal} \\usepackage{amsmath} \\usepackage{wasysym} \\usepackage{amsfonts} \\usepackage{amssymb} \\usepackage{amsbsy} \\usepackage{mathrsfs} \\usepackage{upgreek} \\setlength{\\oddsidemargin}{-69pt} \\begin{document}$$T_{\\mathrm{c}}$$\\end{document} T c ) which are almost an order of magnitude higher than those of the bulk FeSe and are highest among all known Fe-based superconductor...

  9. Scanning tunneling microscopy study of the c(4x4) structure formation in the sub-monolayer Sb/Si(100) system

    International Nuclear Information System (INIS)

    Upon Sb desorption from a Sb-saturated Si(100) surface, the c(4x4) structure formed at about 0.25 monolayer Sb coverage. The c(4x4) reconstruction has been found to develop best when the surface is slightly contaminated, plausibly, by carbon. The Si(100)-c(4x4)-Sb surface shows up in the high-resolution filled state scanning tunneling microscopy images as being very similar to that of the recently reported c(4x4)-Si reconstruction. Here the main features of the Si(100)-c(4x4)-Sb structure are identified and the possible atomic arrangement is discussed. (author)

  10. Secondary organic aerosol composition from C12 alkanes.

    Science.gov (United States)

    Schilling Fahnestock, Katherine A; Yee, Lindsay D; Loza, Christine L; Coggon, Matthew M; Schwantes, Rebecca; Zhang, Xuan; Dalleska, Nathan F; Seinfeld, John H

    2015-05-14

    The effects of structure, NOx conditions, relative humidity, and aerosol acidity on the chemical composition of secondary organic aerosol (SOA) are reported for the photooxidation of three C12 alkanes: n-dodecane, cyclododecane, and hexylcyclohexane. Acidity was modified through seed particle composition: NaCl, (NH4)2SO4, and (NH4)2SO4 + H2SO4. Off-line analysis of SOA was carried out by solvent extraction and gas chromatography-mass spectrometry (GC/MS) and direct analysis in real-time mass spectrometry. We report here 750 individual masses of SOA products identified from these three alkane systems and 324 isomers resolved by GC/MS analysis. The chemical compositions for each alkane system provide compelling evidence of particle-phase chemistry, including reactions leading to oligomer formation. Major oligomeric species for alkane SOA are peroxyhemiacetals, hemiacetals, esters, and aldol condensation products. Furans, dihydrofurans, hydroxycarbonyls, and their corresponding imine analogues are important participants in these oligomer-producing reactions. Imines are formed in the particle phase from the reaction of the ammonium sulfate seed aerosol with carbonyl-bearing compounds present in all the SOA systems. Under high-NO conditions, organonitrate products can lead to an increase of aerosol volume concentration by up to a factor of 5 over that in low-NO conditions. Structure was found to play a key role in determining the degree of functionalization and fragmentation of the parent alkane, influencing the mean molecular weight of the SOA produced and the mean atomic O:C ratio. PMID:24814371

  11. Progressive degradation of crude oil n-alkanes coupled to methane production under mesophilic and thermophilic conditions.

    Directory of Open Access Journals (Sweden)

    Lei Cheng

    Full Text Available Although methanogenic degradation of hydrocarbons has become a well-known process, little is known about which crude oil tend to be degraded at different temperatures and how the microbial community is responded. In this study, we assessed the methanogenic crude oil degradation capacity of oily sludge microbes enriched from the Shengli oilfield under mesophilic and thermophilic conditions. The microbial communities were investigated by terminal restriction fragment length polymorphism (T-RFLP analysis of 16S rRNA genes combined with cloning and sequencing. Enrichment incubation demonstrated the microbial oxidation of crude oil coupled to methane production at 35 and 55°C, which generated 3.7±0.3 and 2.8±0.3 mmol of methane per gram oil, respectively. Gas chromatography-mass spectrometry (GC-MS analysis revealed that crude oil n-alkanes were obviously degraded, and high molecular weight n-alkanes were preferentially removed over relatively shorter-chain n-alkanes. Phylogenetic analysis revealed the concurrence of acetoclastic Methanosaeta and hydrogenotrophic methanogens but different methanogenic community structures under the two temperature conditions. Candidate divisions of JS1 and WWE 1, Proteobacteria (mainly consisting of Syntrophaceae, Desulfobacteraceae and Syntrophorhabdus and Firmicutes (mainly consisting of Desulfotomaculum were supposed to be involved with n-alkane degradation in the mesophilic conditions. By contrast, the different bacterial phylotypes affiliated with Caldisericales, "Shengli Cluster" and Synergistetes dominated the thermophilic consortium, which was most likely to be associated with thermophilic crude oil degradation. This study revealed that the oily sludge in Shengli oilfield harbors diverse uncultured microbes with great potential in methanogenic crude oil degradation over a wide temperature range, which extend our previous understanding of methanogenic degradation of crude oil alkanes.

  12. Progressive degradation of crude oil n-alkanes coupled to methane production under mesophilic and thermophilic conditions.

    Science.gov (United States)

    Cheng, Lei; Shi, Shengbao; Li, Qiang; Chen, Jianfa; Zhang, Hui; Lu, Yahai

    2014-01-01

    Although methanogenic degradation of hydrocarbons has become a well-known process, little is known about which crude oil tend to be degraded at different temperatures and how the microbial community is responded. In this study, we assessed the methanogenic crude oil degradation capacity of oily sludge microbes enriched from the Shengli oilfield under mesophilic and thermophilic conditions. The microbial communities were investigated by terminal restriction fragment length polymorphism (T-RFLP) analysis of 16S rRNA genes combined with cloning and sequencing. Enrichment incubation demonstrated the microbial oxidation of crude oil coupled to methane production at 35 and 55°C, which generated 3.7±0.3 and 2.8±0.3 mmol of methane per gram oil, respectively. Gas chromatography-mass spectrometry (GC-MS) analysis revealed that crude oil n-alkanes were obviously degraded, and high molecular weight n-alkanes were preferentially removed over relatively shorter-chain n-alkanes. Phylogenetic analysis revealed the concurrence of acetoclastic Methanosaeta and hydrogenotrophic methanogens but different methanogenic community structures under the two temperature conditions. Candidate divisions of JS1 and WWE 1, Proteobacteria (mainly consisting of Syntrophaceae, Desulfobacteraceae and Syntrophorhabdus) and Firmicutes (mainly consisting of Desulfotomaculum) were supposed to be involved with n-alkane degradation in the mesophilic conditions. By contrast, the different bacterial phylotypes affiliated with Caldisericales, "Shengli Cluster" and Synergistetes dominated the thermophilic consortium, which was most likely to be associated with thermophilic crude oil degradation. This study revealed that the oily sludge in Shengli oilfield harbors diverse uncultured microbes with great potential in methanogenic crude oil degradation over a wide temperature range, which extend our previous understanding of methanogenic degradation of crude oil alkanes.

  13. Compositional characteristics of n-alkanes of the glaciers over the Tibetan Plateau and their environmental and climatic significances

    Institute of Scientific and Technical Information of China (English)

    2009-01-01

    We report on the concentration and compositional features of n-alkanes of natural and anthropogenic origins in the snow samples collected from the Qiyi glacier in the Qilian Mountains, the Yuzhufeng glacier in eastern Kunlun Mountains, the Xiaodongkemadi glacier in the Tanggula Mountains, and the Gurenhekou glacier in the Nyainqêntanglha Range. The results indicate a decrease in the total n-alkane concentration (T-HCs) from the northeast to the south over the Tibetan Plateau. The T-HCs in these studied areas were close to those in the Belukha and Sofiyskiy glacier, Russian Alati Mountains and the Dasuopu glacier in the Himalaya but were much higher than those in the Greenland ice sheet, suggesting that the mountain glaciers in the Asian continent may receive a higher loading of n-alkanes than the Greenland ice core. Moreover, the compositional characteristics of n-alkanes indicated that the n-alkanes in the studied areas were probably originated from the plant waxes as well as the fossil-fuel combustion exhaust, whereas the contribution from the lower organisms was small. In addition, the plant wax (Cn(wax)) and anthropogenic (non-Cn(wax)) contributions revealed that fast industrialization may have significant effects on the organic pollutant composition in glacier over the Tibetan Plateau and its circumference environment. Particularly, except for the Yuzhufeng glacier, the ΣnC21-/ΣnC22+ and (nC15+nC17+nC19)/(nC27+nC29+nC31) ratio decreased from the Qiyi glacier to the Gurenhekou glacier over the Tibetan Plateau, while the carbon preference index (CPI) values increased. These results indicate a decrease in terrigenous input while an increase in marine input from the northeast to the south over the Tibetan Plateau. These two ratios can be used as the climatic and environmental change indicators.

  14. Use of self assembled monolayers at variable coverage to control interface bonding in a model study of interfacial fracture: Pure shear loading

    Energy Technology Data Exchange (ETDEWEB)

    KENT,MICHAEL S.; YIM,HYUN; MATHESON,AARON J.; COGDILL,C.; NELSON,GERALD C.; REEDY JR.,EARL DAVID

    2000-05-16

    The relationships between fundamental interfacial interactions, energy dissipation mechanisms, and fracture stress or fracture toughness in a glassy thermoset/inorganic solid joint are not well understood. This subject is addressed with a model system involving an epoxy adhesive on a polished silicon wafer containing its native oxide. The proportions of physical and chemical interactions at the interface, and the in-plane distribution, are varied using self-assembling monolayers of octadecyltrichlorosilane (ODTS). The epoxy interacts strongly with the bare silicon oxide surface, but forms only a very weak interface with the methylated tails of the ODTS monolayer. The fracture stress is examined as a function of ODTS coverage in the napkin-ring (pure shear) loading geometry. The relationship between fracture stress and ODTS coverage is catastrophic, with a large change in fracture stress occurring over a narrow range of ODTS coverage. This transition in fracture stress does not correspond to a wetting transition of the epoxy. Rather, the transition in fracture stress corresponds to the onset of deformation in the epoxy, or the transition from brittle to ductile fracture. The authors postulate that the transition in fracture stress occurs when the local stress that the interface can support becomes comparable to the yield stress of the epoxy. The fracture results are independent of whether the ODTS deposition occurs by island growth (T{sub dep} = 10 C) or by homogeneous growth (T{sub dep} = 24 C).

  15. The influence of chromatin structure on the frequency of radiation-induced DNA strand breaks: a study using nuclear and nucleoid monolayers

    International Nuclear Information System (INIS)

    To assess the influence of chromatin structure on the frequency of radiation-induced DNA strand breaks, the alkaline unwinding technique was applied to nuclear and nucleoid monolayers. These chromatin substrates were prepared by treating human fibroblasts grown as monolayers with the nonionic detergent Triton X-100 and varying concentrations of cations. The chromatin structure was modified either by a stepwise removal of DNA-bound proteins by extraction in increasing concentrations of monovalent salt, or by the addition or deletion of mono- and divalent cations to condense or decondense the chromatin, respectively. It was found that the stepwise removal of DNA-bound proteins from the chromatin dramatically increased the frequency of radiation-induced DNA strand breaks. The DNA-bound proteins showed a qualitative difference in their ability to protect the DNA where proteins removed by salt concentrations above 1.0 M exerted the greatest protection. Furthermore, the frequency of radiation-induced DNA strand breaks was found to be 6 times lower in condensed chromatin than in decondensed chromatin and about 80 times lower than in protein-depleted chromatin. It is concluded that the presence of DNA-bound proteins and the folding of the chromatin into higher-order structures protect the DNA against radiation-induced strand breaks

  16. Structural Effects on the Langmuir Monolayers of Calix[4]arene Induced by Lower Rim Aromatic Substitution

    Institute of Scientific and Technical Information of China (English)

    HE Wei-Jiang; QIU Lin; LI Jun-Bai; ZHANG Yu; GUO Zi-Jian; ZHU Long-Gen

    2006-01-01

    The Langmuir monolayer properties of lower rim aromatically substituted calix[4]arenes, 5,11,17,23-tetra-tertbutyl-25,27-bis(2-naphth-1'-ylacetylaminoethoxy)-26,28-dihydroxylcalix[4]arene (BNAEC), 5,11,17,23-tetra-tertbutyl-25,27-bis(2-benzoylamino ethoxy)-26,28-dihydroxylcalix[4]arene (BBAEC) and 5,11,17,23-tetra-tert-butyl-25,27-bis(2-cinnamoylaminoethoxy)-26,28-dihydroxylcalix[4]arene (BCAEC), have been studied. Film balance measurements and Brewster angle microscopy (BAM) observation demonstrate that all the compounds can form Langmuir monolayers with different molecular limiting areas. BNAEC or BBAEC monolayer is able to form condensed domains during compression, while BCAEC monolayer can never form condensed domain. BNAEC monolayer is more readily to form condensed domain than BBAEC monolayer. Moreover, BNAEC monolayer can form the total condensed phase during compression even when T=28 ℃, while BBAEC monolayer can not when T> 10 ℃. The results imply that different lower rim aromatic substitutions affect essentially the intermolecular interaction and molecular packing in the monolayer at air/water interface.

  17. Critical wetting of n-alkanes on water; Mouillage critique des alcanes sur l`eau

    Energy Technology Data Exchange (ETDEWEB)

    Ragil, K.

    1996-10-18

    This study concerns the wetting properties of n-alkanes on water under thermodynamic equilibrium conditions, a problem that is interesting for the petroleum industry as well as for the fundamental understanding of wetting phenomena. An experimental study using ellipsometry reveals that pentane on water undergoes a continuous or critical wetting transition at a temperature equal to 53.1 deg. C. This is the first experimental observation of such a transition, confirming theoretical predictions made on this subject over ten years. This transition is characterized by a continuous and reversible evolution of the thickness of the film of pentane with temperature from a thick (but finite film) to a macroscopic film. The critical wetting transition occurs when the Hamaker constant of the system, which gives the net interaction between the two interfaces bounding the wetting layer of pentane in terms of the van der Waals forces, changes sign. A theoretical approach based on the Cahn-Landau theory, which takes into account long range forces (van der Waals forces), enables us to explain the mechanism of the critical wetting transition and to show that a first-order wetting transition should precede it. Because of their similar dispersive properties, linear alkanes could all be able to show such a succession of transitions. An ellipsometry study performed on a brine/hexane/vapor system confirms that a discontinuous transition from a thin microscopic film to a thick but finite adsorbed film takes place. THis study demonstrates that the wetting of alkanes on water is determined by subtle interplay between short range and long range forces, which can lead to an intermediary state between partial and complete wetting. (author)

  18. Ultralow effective work function surfaces using diamondoid monolayers

    Science.gov (United States)

    Narasimha, Karthik Thimmavajjula; Ge, Chenhao; Fabbri, Jason D.; Clay, William; Tkachenko, Boryslav A.; Fokin, Andrey A.; Schreiner, Peter R.; Dahl, Jeremy E.; Carlson, Robert M. K.; Shen, Z. X.; Melosh, Nicholas A.

    2016-03-01

    Electron emission is critical for a host of modern fabrication and analysis applications including mass spectrometry, electron imaging and nanopatterning. Here, we report that monolayers of diamondoids effectively confer dramatically enhanced field emission properties to metal surfaces. We attribute the improved emission to a significant reduction of the work function rather than a geometric enhancement. This effect depends on the particular diamondoid isomer, with [121]tetramantane-2-thiol reducing gold's work function from ∼5.1 eV to 1.60 ± 0.3 eV, corresponding to an increase in current by a factor of over 13,000. This reduction in work function is the largest reported for any organic species and also the largest for any air-stable compound. This effect was not observed for sp3-hybridized alkanes, nor for smaller diamondoid molecules. The magnitude of the enhancement, molecule specificity and elimination of gold metal rearrangement precludes geometric factors as the dominant contribution. Instead, we attribute this effect to the stable radical cation of diamondoids. Our computed enhancement due to a positively charged radical cation was in agreement with the measured work functions to within ±0.3 eV, suggesting a new paradigm for low-work-function coatings based on the design of nanoparticles with stable radical cations.

  19. Transfer of CVD-grown monolayer graphene onto arbitrary substrates.

    Science.gov (United States)

    Suk, Ji Won; Kitt, Alexander; Magnuson, Carl W; Hao, Yufeng; Ahmed, Samir; An, Jinho; Swan, Anna K; Goldberg, Bennett B; Ruoff, Rodney S

    2011-09-27

    Reproducible dry and wet transfer techniques were developed to improve the transfer of large-area monolayer graphene grown on copper foils by chemical vapor deposition (CVD). The techniques reported here allow transfer onto three different classes of substrates: substrates covered with shallow depressions, perforated substrates, and flat substrates. A novel dry transfer technique was used to make graphene-sealed microchambers without trapping liquid inside. The dry transfer technique utilizes a polydimethylsiloxane frame that attaches to the poly(methyl methacrylate) spun over the graphene film, and the monolayer graphene was transferred onto shallow depressions with 300 nm depth. The improved wet transfer onto perforated substrates with 2.7 μm diameter holes yields 98% coverage of holes covered with continuous films, allowing the ready use of Raman spectroscopy and transmission electron microscopy to study the intrinsic properties of CVD-grown monolayer graphene. Additionally, monolayer graphene transferred onto flat substrates has fewer cracks and tears, as well as lower sheet resistance than previous transfer techniques. Monolayer graphene films transferred onto glass had a sheet resistance of ∼980 Ω/sq and a transmittance of 97.6%. These transfer techniques open up possibilities for the fabrication of various graphene devices with unique configurations and enhanced performance. PMID:21894965

  20. Magnetic and Structural Phases of Monolayer 02 on Graphite

    DEFF Research Database (Denmark)

    McTague, J. P.; Nielsen, Mourits

    1976-01-01

    Neutron diffraction studies of O2 thin films physisorbed on the basal plane of graphite show three distinct two-dimensional crystalline phases, all incommensurate with the substrate lattice. The low-temperature monolayer phase has a distorted triangular structure analogous to the closest-packed p......Neutron diffraction studies of O2 thin films physisorbed on the basal plane of graphite show three distinct two-dimensional crystalline phases, all incommensurate with the substrate lattice. The low-temperature monolayer phase has a distorted triangular structure analogous to the closest...

  1. Resonance Raman spectra of phthalocyanine monolayers on different supports. A normal mode analysis of zinc phthalocyanine by means of the MNDO method

    NARCIS (Netherlands)

    Palys, Barbara J.; Ham, van den Dirk M.W.; Briels, Wim; Feil, Dirk

    1995-01-01

    Resonance Raman spectra of monolayers of transition metal phthalocyanines reveal specific interaction with the support. To elucidate its mechanism, Raman spectra of zinc phthalocyanine monolayers were studied. The analysis was based largely on the results of MNDO calculations. Calculated wavenumbers

  2. SYNCHROTRON X-RAY OBSERVATIONS OF A MONOLAYER TEMPLATE FOR MINERALIZATION

    International Nuclear Information System (INIS)

    Mineral nucleation at a Langmuir film interface has been studied by synchrotron x-ray scattering. Diluted calcium bicarbonate solutions were used as subphases for arachidic and stearic acid monolayers, compressed in a Langmuir trough. Self-assembly of the monolayer template is observed directly, and subsequent crystal growth monitored in-situ

  3. The effect of gauche molecular conformations on the phase diagram of a Langmuir monolayer

    NARCIS (Netherlands)

    Zangi, R; Rice, SA

    2003-01-01

    Experimental and simulation studies have shown that the gauche conformational degrees of freedom of long-chain amphiphile molecules assembled in a dense Langmuir monolayer play an important role in determining the structures of the several phases that the monolayer supports. Nevertheless, for simpli

  4. Flash Points of Secondary Alcohol and n-Alkane Mixtures.

    Science.gov (United States)

    Esina, Zoya N; Miroshnikov, Alexander M; Korchuganova, Margarita R

    2015-11-19

    The flash point is one of the most important characteristics used to assess the ignition hazard of mixtures of flammable liquids. To determine the flash points of mixtures of secondary alcohols with n-alkanes, it is necessary to calculate the activity coefficients. In this paper, we use a model that allows us to obtain enthalpy of fusion and enthalpy of vaporization data of the pure components to calculate the liquid-solid equilibrium (LSE) and vapor-liquid equilibrium (VLE). Enthalpy of fusion and enthalpy of vaporization data of secondary alcohols in the literature are limited; thus, the prediction of these characteristics was performed using the method of thermodynamic similarity. Additionally, the empirical models provided the critical temperatures and boiling temperatures of the secondary alcohols. The modeled melting enthalpy and enthalpy of vaporization as well as the calculated LSE and VLE flash points were determined for the secondary alcohol and n-alkane mixtures. PMID:26491811

  5. Chromium oxide catalysts in the dehydrogenation of alkanes

    OpenAIRE

    Airaksinen, Sanna

    2005-01-01

    Light alkenes, such as propene and butenes, are important intermediates in the manufacture of fuel components and chemicals. The direct catalytic dehydrogenation of the corresponding alkanes is a selective way to produce these alkenes and is frequently carried out using chromia/alumina catalysts. The aim of this work was to obtain structure–activity information, which could be utilised in the optimisation of this catalytic system. The properties of chromia/alumina catalysts were investigated ...

  6. Alkane biosynthesis genes in cyanobacteria and their transcriptional organization

    Directory of Open Access Journals (Sweden)

    Stephan eKlähn

    2014-07-01

    Full Text Available In cyanobacteria, alkanes are synthesized from a fatty acyl-ACP by two enzymes, acyl-acyl carrier protein reductase (AAR and aldehyde deformylating oxygenase (ADO. Despite the great interest in the exploitation for biofuel production, nothing is known about the transcriptional organization of their genes or the physiological function of alkane synthesis. The comparison of 115 microarray datasets indicates the relatively constitutive expression of aar and ado genes. The analysis of 181 available genomes showed that in 90% of the genomes both genes are present, likely indicating their physiological relevance. In 61% of them they cluster together with genes encoding acetyl-CoA carboxyl transferase and a short chain dehydrogenase, strengthening the link to fatty acid metabolism and in 76% of the genomes they are located in tandem, suggesting constraints on the gene arrangement. However, contrary to the expectations for an operon, we found in Synechocystis sp. PCC 6803 specific promoters for the two genes, sll0208 (ado and sll0209 (aar, that give rise to monocistronic transcripts. Moreover, the upstream located ado gene is driven by a proximal as well as a second, distal, promoter, from which a third transcript, the ~160 nt sRNA SyR9 is transcribed. Thus, the transcriptional organization of the alkane biosynthesis genes in Synechocystis sp. PCC 6803 is of substantial complexity. We verified all three promoters to function independently from each other and show a similar promoter arrangement also in the more distant Nodularia spumigena, Trichodesmium erythraeum, Anabaena sp. PCC 7120, Prochlorococcus MIT9313 and MED4. The presence of separate regulatory elements and the dominance of monocistronic mRNAs suggest the possible autonomous regulation of ado and aar. The complex transcriptional organization of the alkane synthesis gene cluster has possible metabolic implications and should be considered when manipulating the expression of these genes in

  7. Active coke: Carbonaceous materials as catalysts for alkane dehydrogenation

    OpenAIRE

    McGregor, J.; Huang, Z; Parrott, E.; Zeitler, J.; Nguyen, K.; Rawson, J.; Carley, A; Hansen, T.; Tessonnier, J.; Su, D.; Teschner, D; Vass, E.; Knop-Gericke, A.; Schlögl, R.; Gladden, L.

    2010-01-01

    The catalytic dehydrogenation (DH) and oxidative dehydrogenation (ODH) of light alkanes are of significant industrial importance. In this work both carbonaceous materials deposited on VOx/Al2O3 catalysts during reaction and unsupported carbon nanofibres (CNFs) are shown to be active for the dehydrogenation of butane in the absence of gas-phase oxygen. Their activity in these reactions is shown to be dependent upon their structure, with different reaction temperatures yielding structurally dif...

  8. Direct hydrodeoxygenation of raw woody biomass into liquid alkanes

    OpenAIRE

    Qineng Xia, Zongjia Chen, Yi Shao, Xueqing Gong, Haifeng Wang, Xiaohui Liu, Stewart F. Parker, Xue Han, Sihai Yang & Yanqin Wang

    2016-01-01

    Being the only sustainable source of organic carbon, biomass is playing an ever-increasingly important role in our energy landscape. The conversion of renewable lignocellulosic biomass into liquid fuels is particularly attractive but extremely challenging due to the inertness and complexity of lignocellulose. Here we describe the direct hydrodeoxygenation of raw woods into liquid alkanes with mass yields up to 28.1 wt% over a multifunctional Pt/NbOPO4 catalyst in cyclohexane. T...

  9. Pairwise-additive hydrophobic effect for alkanes in water

    OpenAIRE

    Wu, Jianzhong; Prausnitz, John M.

    2008-01-01

    Pairwise additivity of the hydrophobic effect is indicated by reliable experimental Henry's constants for a large number of linear and branched low-molecular-weight alkanes in water. Pairwise additivity suggests that the hydrophobic effect is primarily a local phenomenon and that the hydrophobic interaction may be represented by a semiempirical force field. By representing the hydrophobic potential between two methane molecules as a linear function of the overlap volume of the hydration layer...

  10. Influence of compost amendments on the diversity of alkane degrading bacteria in hydrocarbon contaminated soils

    Directory of Open Access Journals (Sweden)

    Michael eSchloter

    2014-03-01

    Full Text Available Alkane degrading microorganisms play an important role for bioremediation of petrogenic contaminated environments. In this study, we investigated the effects of compost addition on the diversity of alkane monooxygenase gene (alkB harboring bacteria in oil-contaminated soil originated from an industrial zone in Celje, Slovenia, to improve our understanding about the bacterial community involved in alkane degradation and the effects of amendments. Soil without any amendments (control soil and soil amended with compost of different maturation stages, i 1 year and ii 2 weeks, were incubated under controlled conditions in a microcosm experiment and sampled after 0, 6, 12 and 36 weeks of incubation. By using quantitative real-time PCR higher number of alkB genes could be detected in soil samples with compost compared to the control soil after 6, 12 and 36 weeks mainly if the less maturated compost was added. To get an insight into the composition of the alkB harboring microbial communities, we performed next generation sequencing of alkB gene fragment amplicons. Richness and diversity of alkB gene harboring prokaryotes was higher in soil mixed with compost compared to control soil after 6, 12 and 36 weeks again with stronger effects of the less maturated compost. Comparison of communities detected in different samples and time points based on principle component analysis revealed that the addition of compost in general stimulated the abundance of alkB harboring Actinobacteria during the experiment independent from the maturation stage of the compost compared to the control soils. In addition alkB harboring proteobacteria like Shewanella or Hydrocarboniphaga as well as proteobacteria of the genus Agrobacterium responded positively to the addition of compost to soil The amendment of the less maturated compost resulted in addition in a large increase of alkB harboring bacteria of the Cytophaga group (Microscilla mainly at the early sampling

  11. C60 fullerene promotes lung monolayer collapse

    OpenAIRE

    Barnoud, Jonathan; Urbini, Laura; Monticelli, Luca

    2015-01-01

    Airborne nanometre-sized pollutants are responsible for various respiratory diseases. Such pollutants can reach the gas-exchange surface in the alveoli, which is lined with a monolayer of lung surfactant. The relationship between physiological effects of pollutants and molecular-level interactions is largely unknown. Here, we determine the effects of carbon nanoparticles on the properties of a model of lung monolayer using molecular simulations. We simulate phase-separated lipid monolayers in...

  12. Predicting Two-Dimensional Silicon Carbide Monolayers.

    Science.gov (United States)

    Shi, Zhiming; Zhang, Zhuhua; Kutana, Alex; Yakobson, Boris I

    2015-10-27

    Intrinsic semimetallicity of graphene and silicene largely limits their applications in functional devices. Mixing carbon and silicon atoms to form two-dimensional (2D) silicon carbide (SixC1-x) sheets is promising to overcome this issue. Using first-principles calculations combined with the cluster expansion method, we perform a comprehensive study on the thermodynamic stability and electronic properties of 2D SixC1-x monolayers with 0 ≤ x ≤ 1. Upon varying the silicon concentration, the 2D SixC1-x presents two distinct structural phases, a homogeneous phase with well dispersed Si (or C) atoms and an in-plane hybrid phase rich in SiC domains. While the in-plane hybrid structure shows uniform semiconducting properties with widely tunable band gap from 0 to 2.87 eV due to quantum confinement effect imposed by the SiC domains, the homogeneous structures can be semiconducting or remain semimetallic depending on a superlattice vector which dictates whether the sublattice symmetry is topologically broken. Moreover, we reveal a universal rule for describing the electronic properties of the homogeneous SixC1-x structures. These findings suggest that the 2D SixC1-x monolayers may present a new "family" of 2D materials, with a rich variety of properties for applications in electronics and optoelectronics. PMID:26394207

  13. Predicting Two-Dimensional Silicon Carbide Monolayers.

    Science.gov (United States)

    Shi, Zhiming; Zhang, Zhuhua; Kutana, Alex; Yakobson, Boris I

    2015-10-27

    Intrinsic semimetallicity of graphene and silicene largely limits their applications in functional devices. Mixing carbon and silicon atoms to form two-dimensional (2D) silicon carbide (SixC1-x) sheets is promising to overcome this issue. Using first-principles calculations combined with the cluster expansion method, we perform a comprehensive study on the thermodynamic stability and electronic properties of 2D SixC1-x monolayers with 0 ≤ x ≤ 1. Upon varying the silicon concentration, the 2D SixC1-x presents two distinct structural phases, a homogeneous phase with well dispersed Si (or C) atoms and an in-plane hybrid phase rich in SiC domains. While the in-plane hybrid structure shows uniform semiconducting properties with widely tunable band gap from 0 to 2.87 eV due to quantum confinement effect imposed by the SiC domains, the homogeneous structures can be semiconducting or remain semimetallic depending on a superlattice vector which dictates whether the sublattice symmetry is topologically broken. Moreover, we reveal a universal rule for describing the electronic properties of the homogeneous SixC1-x structures. These findings suggest that the 2D SixC1-x monolayers may present a new "family" of 2D materials, with a rich variety of properties for applications in electronics and optoelectronics.

  14. Equilibrating nanoparticle monolayers using wetting films.

    Science.gov (United States)

    Pontoni, Diego; Alvine, Kyle J; Checco, Antonio; Gang, Oleg; Ocko, Benjamin M; Pershan, Peter S

    2009-01-01

    Monolayers of bimodal gold nanoparticles on silicon are investigated by a combination of microscopy (dry monolayers) and x-ray diffraction (dry and wet monolayers). In the presence of an excess of small particles, the nanoscale packing structure closely resembles the small-particle-rich scenario of the structural crossover transition that has been predicted and also observed with micron-scale hard-sphere colloids. Structural morphology is monitored in situ during monolayer dissolution and reassembly within the thin liquid wetting film. This approach allows investigation of size and solvent effects on nanoparticles in quasi-two-dimensional confinement. PMID:19257214

  15. Utilização dos componentes da cera das plantas, em especial os n-alcanos, em estudos de nutrição de ruminantes The utilization of plant wax components, especially n-alkanes, in ruminants nutrition studies

    Directory of Open Access Journals (Sweden)

    Dimas Estrásulas de Oliveira

    2000-06-01

    Full Text Available A utilização de métodos indiretos para estimar o consumo e a digestibilidade dos alimentos por ruminantes é bastante importante, porque pode representar uma economia de tempo, dinheiro e trabalho em relação aos experimentos convencionais e, também, por permitir tais estimativas sob condições extensivas de pastejo. Dentre esses métodos, sobressai-se o dos indicadores fecais. Várias substâncias têm sido utilizadas para esse fim. Este artigo é uma revisão de alguns aspectos sobre o uso de n-alcanos como indicadores em estudos de nutrição de ruminantes.The indirect methods used to estimate the intake and digestibility of feedstuffs by ruminants are very important because these methods represent an economy of time, money and work, in relation to conventional trials. Also, they permit estimates in grazing conditions. Among these methods, the faecal markers stand out and lots of substances have been used. This paper is a review about the use of n-alkanes as markers in ruminant nutrition studies.

  16. Citrate-reduced silver hydrosol modified with omega-mercaptoalkanoic acids self-assembled monolayers as a substrate for surface-enhanced resonance Raman scattering. A study with cytochrome c

    NARCIS (Netherlands)

    Bonifacio, A.; Sneppen, van der L.; Gooijer, C.; Zwan, van der G.

    2004-01-01

    A new citrate-reduced silver hydrosol coated with omega-mercaptoalkanoic acids (mercaptopropionic and mercaptoundecanoic acids) self-assembled monolayers was prepared and characterized with surface-enhanced Raman spectroscopy. The structure and the quality of the coating monolayers are discussed and

  17. Chemical characterization of organosulfates in secondary organic aerosol derived from the photooxidation of alkanes

    Science.gov (United States)

    Riva, Matthieu; Da Silva Barbosa, Thais; Lin, Ying-Hsuan; Stone, Elizabeth A.; Gold, Avram; Surratt, Jason D.

    2016-09-01

    We report the formation of aliphatic organosulfates (OSs) in secondary organic aerosol (SOA) from the photooxidation of C10-C12 alkanes. The results complement those from our laboratories reporting the formation of OSs and sulfonates from gas-phase oxidation of polycyclic aromatic hydrocarbons (PAHs). Both studies strongly support the formation of OSs from the gas-phase oxidation of anthropogenic precursors, as hypothesized on the basis of recent field studies in which aromatic and aliphatic OSs were detected in fine aerosol collected from several major urban locations. In this study, dodecane, cyclodecane and decalin, considered to be important SOA precursors in urban areas, were photochemically oxidized in an outdoor smog chamber in the presence of either non-acidified or acidified ammonium sulfate seed aerosol. Effects of acidity and relative humidity on OS formation were examined. Aerosols collected from all experiments were characterized by ultra performance liquid chromatography coupled to electrospray ionization high-resolution quadrupole time-of-flight mass spectrometry (UPLC/ESI-HR-QTOFMS). Most of the OSs identified could be explained by formation of gaseous epoxide precursors with subsequent acid-catalyzed reactive uptake onto sulfate aerosol and/or heterogeneous reactions of hydroperoxides. The OSs identified here were also observed and quantified in fine urban aerosol samples collected in Lahore, Pakistan, and Pasadena, CA, USA. Several OSs identified from the photooxidation of decalin and cyclodecane are isobars of known monoterpene organosulfates, and thus care must be taken in the analysis of alkane-derived organosulfates in urban aerosol.

  18. Multi-origin alkanes related to CO2-rich, mantle-derived fluid in Dongying Sag, Bohai Bay Basin

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    With the newly obtained carbon isotope data for the natural gas, a pilot study of multiple-sourced alkanes related to the mantled-derived fluid is presented. The carbon isotope values of alkanes in the Dongying Sag possess thefea tures indicating a general organic origin. However, there are two sub-populations in the isotopic data set, which reflect two specific types of origins. In gene ral, the sub-population with high δ13CCH4 values is related to the CO2-rich, mantle-derived fluid, and it is distributed in the belts where mantle-derived fluid flow and basic volcanic activities have occurred. Geological and geochemical studies demonstrate that this variation of methane carbon isotope values in the Dongying Sag is unrelated with the basin bury and thermal histories, types of source rocks, and reactions between basin fluid and rocks. Mixing of mantle-derived fluid and organic sourced hydrocarbons is probably the cause for the variation .

  19. Ionic channels and nerve membrane constituents. Tetrodotoxin-like interaction of saxitoxin with cholesterol monolayers.

    Science.gov (United States)

    Villegas, R; Barnola, F V

    1972-01-01

    Saxitoxin (STX) and tetrodotoxin (TTX) have the same striking property of blocking the Na(+) channels in the axolemma. Experiments with nerve plasma membrane components of the squid Dosidicus gigas have shown that TTX interacts with cholesterol monolayers. Similar experiments were carried out with STX. The effect of STX on the surface pressure-area diagrams of lipid monolayers and on the fluorescence emission spectra of sonicated nerve membranes was studied. The results indicate a TTX-like interaction of STX with cholesterol monolayers. The expansion of the monolayers caused by 10(-6)M STX was 2.2 A(2)/cholesterol molecule at 25 degrees C. From surface pressure measurements at constant cholesterol area (39 A(2)/molecule) in media with various STX concentrations, it was calculated that the STX/cholesterol surface concentration ratio is 0.54. The apparent dissociation constant of the STX-cholesterol monolayer complex is 4.0 x 10(-7)M. The STX/cholesterol ratio and the apparent dissociation constant are similar to those determined for TTX. The presence of other lipids in the monolayers affects the STX-cholesterol association. The interactions of STX and TTX with cholesterol monolayers suggest (a) that cholesterol molecules may be part of the nerve membrane Na(+) channels, or (b) that the toxin receptor at the nerve membrane shares similar chemical features with the cholesterol monolayers. PMID:5007264

  20. Self-Assembled Monolayers deposition in Supercritical Carbon Dioxide

    OpenAIRE

    Rabbia, Laurent; Perrut, Vincent; Pons, Patrick; Lellouchi, Djemel

    2009-01-01

    Self-Assembled Monolayers of organic molecules have been successfully deposited onto wafer surface in supercritical carbon dioxide. Deposition method and apparatus are described. The layers are characterized by AFM and water droplet contact angle. Interest of this technique compared to liquid and vapor phase is discussed and studied for surface conversion from hydrophilic to hydrophobic for different materials.

  1. Melting mechanism in monolayers of flexible rod-shaped molecules

    DEFF Research Database (Denmark)

    Hansen, Flemming Yssing; Taub, H.

    1992-01-01

    The melting of butane and hexane monolayers adsorbed on a graphite basal-plane surface has been studied by molecular-dynamics simulations and experimentally by neutron diffraction. The simulation results are qualitatively consistent with the observed diffraction patterns and suggest a general...

  2. STM visualisation of counterions and the effect of charges on self-assembled monolayers of macrocycles

    Directory of Open Access Journals (Sweden)

    Tibor Kudernac

    2011-10-01

    Full Text Available Despite their importance in self-assembly processes, the influence of charged counterions on the geometry of self-assembled organic monolayers and their direct localisation within the monolayers has been given little attention. Recently, various examples of self-assembled monolayers composed of charged molecules on surfaces have been reported, but no effort has been made to prove the presence of counterions within the monolayer. Here we show that visualisation and exact localisation of counterions within self-assembled monolayers can be achieved with scanning tunnelling microscopy (STM. The presence of charges on the studied shape-persistent macrocycles is shown to have a profound effect on the self-assembly process at the liquid–solid interface. Furthermore, preferential adsorption was observed for the uncharged analogue of the macrocycle on a surface.

  3. Characterization of Particulate Matter Transport across the Lung-Surfactant Barrier using Langmuir Monolayers

    Science.gov (United States)

    Eaton, Jeremy; Dennin, Michael; Levine, Alex; George, Steven

    2014-03-01

    We investigate the transport of particulate matter acros the lung using a monolayer of bovine lung surfactant tagged with NBD in conjunction with alveolar lung cells below the air-water interface. The monolaye dynamically compressed and expanded to induce phase transitions as well as buckling and folding. Polystyrene spheres ranging from 20 to 500 nm in diameter were tagged with fluorescent molecules and deposited on the monolayer. We will present results of preliminary studies of the transport of beads from the air-water surface to the lung cells through the monolayer. Characterization of the transfer will focus on differential fluorescence microscopy to distinguish uncoated beads from beads from beads coated with surfactant monolayers. The presence or absence of surfactant associated with the beads provides insight into potential transfer mechanisms and will serve as an input into models of the bead transfer. We gladly acknowledge the support of NSF grant DMR-1309402.

  4. Nd-doped ZnO monolayer: High Curie temperature and large magnetic moment

    Science.gov (United States)

    Tan, Changlong; Sun, Dan; Zhou, Long; Tian, Xiaohua; Huang, Yuewu

    2016-10-01

    We performed first-principles calculations within density-functional theory to study the structural, electronic, and magnetic properties of Nd-doped ZnO monolayer. The calculated results reveal that Nd-doped ZnO monolayer exhibits stable room temperature ferromagnetism with a large saturation magnetic moment of 3.99 μB per unit in ZnO monolayer. The magnetic property is contributed to the localized f sates of Nd atoms. When two Zn atoms are substituted by two Nd dopants, they tend to form ferromagnetic (FM) coupling and the estimated Curie temperature is higher than room temperature. More interesting, the impurity bands appear within the band gap of ZnO monolayer due to the introduction of Nd dopant. Our results may provide a reference for modifying the material property of ZnO monolayer and are promising as nanoscale building block in spintronic devices.

  5. In situ and real-time atomic force microscopy studies of the stability of oligothiophene langmuir-blodgett monolayers in liquid

    KAUST Repository

    Yin, Naining

    2014-03-20

    Oligothiophene thin films have been considered as promising material for molecular electronics due to their desirable electronic properties and high structural stability under ambient conditions. To ensure performance in devices the functional structures, such as individual ordered domains, must be stable under practical and operational conditions or environments including exposure to various media. This work investigates the structure of oligothiophene Langmuir-Blodgett (LB) films upon exposure to liquid media such as water, ethanol (EtOH), and mixed tetrahydrofuran (THF)/EtOH solutions. The LB films form islands ranging from 500 nm up to 1 μm consisting of densely packed oligothiophene molecules. These islands are surrounded by bare substrate and loosely packed adsorbates. In situ and time-dependent AFM images were acquired to reveal the structural evolution, from which degradation pathways and kinetics are extracted. Degradation of these LB films initiates and propagates from intraisland defect sites, such as cracks and pin holes, whereas the edges of islands remain intact on the surface. The observations appear to be in contrast to the known degradation mechanism among self-assembled monolayers, such as alkanethiols on gold, which initiates and progresses at domain boundaries. Rationale for the observed degradation processes will also be discussed. © 2014 American Chemical Society.

  6. Growth and ordering of Ni(II) diphenylporphyrin monolayers on Ag(111) and Ag/Si(111) studied by STM and LEED

    International Nuclear Information System (INIS)

    The room temperature self-assembly and ordering of (5,15-diphenylporphyrinato)nickel(II) (NiDPP) on the Ag(111) and Ag/Si(111)-(√3 × √3)R30° surfaces have been investigated using scanning tunnelling microscopy and low-energy electron diffraction. The self-assembled structures and lattice parameters of the NiDPP monolayer are shown to be extremely dependent on the reactivity of the substrate, and probable molecular binding sites are proposed. The NiDPP overlayer on Ag(111) grows from the substrate step edges, which results in a single-domain structure. This close-packed structure has an oblique unit cell and consists of molecular rows. The molecules in adjacent rows are rotated by approximately 17° with respect to each other. In turn, the NiDPP molecules form three equivalent domains on the Ag/Si(111)-(√3 × √3)R30° surface, which follow the three-fold symmetry of the substrate. The molecules adopt one of three equivalent orientations on the surface, acting as nucleation sites for these domains, due to the stronger molecule-substrate interaction compared to the case of the Ag(111). The results are explained in terms of the substrate reactivity and the lattice mismatch between the substrate and the molecular overlayer. (paper)

  7. First-principles study of the structural and electronic properties of MoS2-WS2 and MoS2-MoTe2 monolayer heterostructures

    Science.gov (United States)

    Wang, Qianwen; Wu, Ping; Cao, Gengyu; Huang, Min

    2013-12-01

    Using first-principles calculations, we have systematically investigated the geometric and electronic structure of MoS2-WS2 and MoS2-MoTe2 monolayer (ML) heterostructures. Analysis of the variation of the total density of states and partial density of states of the specific atoms in the interfaces demonstrates that the two heterostructures show rather different properties and different changes from the initial MoS2 ML. The MoS2-WS2 ML heterostructure is still a semiconductor with a band gap of 1.58 eV, which is smaller than that of MoS2 and WS2 MLs. However, the strong interactions between MoS2and MoTe2 at the interfacial sites induce the MoS2-MoTe2 ML heterostructure to display metallic characteristics. Our results indicate that the ML heterostructures of MoS2-WS2 and MoS2-MoTe2 are expected to be a possible way to extend the application of the transition-metal dichalcogenides.

  8. Multifunctional self-assembled monolayers

    Energy Technology Data Exchange (ETDEWEB)

    Zawodzinski, T.; Bar, G.; Rubin, S.; Uribe, F. [Los Alamos National Lab., NM (United States); Ferrais, J. [Texas Univ., Dallas, TX (United States)

    1996-06-01

    This is the final report of at three year, Laboratory-Directed Research and Development (LDRD) project at the Los Alamos National Laboratory (LANL). The specific goals of this research project were threefold: to develop multifunctional self-assembled monolayers, to understand the role of monolayer structure on the functioning of such systems, and to apply this knowledge to the development of electrochemical enzyme sensors. An array of molecules that can be used to attach electrochemically active biomolecules to gold surfaces has been synthesized. Several members of a class of electroactive compounds have been characterized and the factors controlling surface modification are beginning to be characterized. Enzymes have been attached to self-assembled molecules arranged on the gold surface, a critical step toward the ultimate goal of this project. Several alternative enzyme attachment strategies to achieve robust enzyme- modified surfaces have been explored. Several means of juxtaposing enzymes and mediators, electroactive compounds through which the enzyme can exchange electrons with the electrode surface, have also been investigated. Finally, the development of sensitive biosensors based on films loaded with nanoscale-supported gold particles that have surface modified with the self-assembled enzyme and mediator have been explored.

  9. Ultrafast shock compression of self-assembled monolayers: a molecular picture.

    Science.gov (United States)

    Patterson, James E; Dlott, Dana D

    2005-03-24

    Simulations of self-assembled monolayers (SAMs) are performed to interpret experimental measurements of ultrafast approximately 1 GPa (volume compression deltaV approximately 0.1) planar shock compression dynamics probed by vibrational sum-frequency generation (SFG) spectroscopy (Lagutchev, A. S.; Patterson, J. E.; Huang, W.; Dlott, D. D. J. Phys. Chem. B 2005, 109, XXXX). The SAMs investigated are octadecanethiol (ODT) and pentadecanethiol (PDT) on Au(111) and Ag(111) substrates, and benzyl mercaptan (BMT) on Au(111). In the alkane SAMs, SFG is sensitive to the instantaneous orientation of the terminal methyl; in BMT it is sensitive to the phenyl orientation. Computed structures of alkane SAMs are in good agreement with experiment. In alkanes, the energies of gauche defects increase with increasing number and depth below the methyl plane, with the exception of ODT/Au where both single and double gauche defects at the two uppermost dihedrals have similar energies. Simulations of isothermal uniaxial compression of SAM lattices show that chain and methyl tilting is predominant in PDT/Au, ODT/Ag and PDT/Ag, whereas single and double gauche defect formation is predominant in ODT/Au. Time-resolved shock data showing transient SFG signal loss of ODT/Au and PDT/Au are fit by calculations of the terminal group orientations as a function of deltaV and their contributions to the SFG hyperpolarizability. The highly elastic response of PDT/Au results from shock-generated methyl and chain tilting. The viscoelastic response of ODT/Au results from shock generation of single and double gauche defects. Isothermal compression simulations help explain and fit the time dependence of shock spectra but generally underestimate the magnitude of SFG signal loss because they do not include effects of high-strain-rate dynamics and shock front and surface irregularities. PMID:16863164

  10. Processing and Quality Evaluation of Additive Manufacturing Monolayer Specimens

    Directory of Open Access Journals (Sweden)

    Christiane Wendt

    2016-01-01

    Full Text Available Although its importance has increased significantly, Additive Manufacturing is not yet a fully accepted industrial manufacturing process for load-carrying parts. The future success of the process group depends on its standardization. This work proposes a methodology for the design, manufacturing, and quality evaluation of specimens manufactured by Fused Layer Modeling that are composed of only one layer (so-called monolayers. The processing methodology and properties of monolayers have not been studied systematically yet. A first systematic design of monolayers for mechanical testing is presented. Rectangular and circular monolayers adapted to the loads of tensile and compression testing are manufactured using different trajectory strategies. Frequently occurring macro- and microgeometrical defects are evaluated and categorized in order to optimize the part quality. This work also studies the effect of some manufacturing parameters such as the gap between print head and machine bed, trajectory strategy, bed leveling, and temperatures on part quality. The most suitable specimens are tested mechanically in tensile or compression tests. In the case of study, tensile strength values are only 8.6% lower than the values for reference tests on the unextruded filament. However, the properties deviate more strongly for compression tests which may be due to the selected specimen geometry.

  11. 单双层结构的石墨烯纳米带边界态的第一原理研究%First-principles studies on edge states of zigzag graphene nanoribbons with monolayer and bilayer structures

    Institute of Scientific and Technical Information of China (English)

    陆肖励; 张燕娜; 姚志东

    2011-01-01

    This paper studies the stable structure and electronic structure of monolayer and bilayer zigzag graphene nanoribbons based on the first-principle calculation of density functional theory. The result shows that the bilayer with a-alignment edge attracts e%利用基于密度泛函理论的第一性计算,对单双层结构的石墨烯纳米带的稳态结构和电子结构进行了研究。研究表明:α型的边界层的吸引使体系发生边界弯曲并存在非零能量边界态,届型的边界体系保持结构平整。它们都在单双层边界存在零能量的边界态。

  12. Dehydrogenation of light alkanes over zeolites

    NARCIS (Netherlands)

    Narbeshuber, Thomas F.; Brait, Axel; Seshan, Kulathuiyer; Lercher, Johannes A.

    1997-01-01

    The conversion of light paraffins to olefins and the secondary reactions of the unsaturated compounds were investigated on H-ZSM5 and H-Y zeolites between 733 and 823 K. Steady state- and transient response-isotope tracing studies revealed that two mechanisms of dehydrogenation are operative. The ma

  13. Stilling Waves with Ordered Molecular Monolayers

    Science.gov (United States)

    Vitz, Ed

    2008-01-01

    A demonstration of the damping effect of an oil monolayer on water waves is described. The history of this remarkable demonstration--with a 2000 (or more) year span--and a brief explanation in terms of the properties of water and the monolayer are presented. If a layer of olive oil, one molecule thick (about one-ten millionth of a centimeter), is…

  14. The anesthetic effect of alcohols and alkanes in caenorhabditis elegans (C. E. )

    Energy Technology Data Exchange (ETDEWEB)

    Anton, A.H.; Berk, A.I.; Nicholls, C.H. (Case Western Reserve Univ., Cleveland, OH (United States))

    1991-03-11

    The authors colleagues reported that the non-parasitic roundworm, C.E., was reversibly immobilized by volatile anesthetics, whose potencies were directly related to their lipid solubilities as in other animals. In further studies on this phenomenon, they tested a homologous series of organic solvents, to determine whether they also had a reversible anesthetic effect in C.E. as in other animals. Synchronized 3-1/2 day-old cultures of about 100 worms each were exposed to increasing concentrations of the alcohols (C{sub 1} - C{sub 14}) and alkanes (C{sub 5} -C{sub 10}) in 15 ml sealed bottles in a volume of 0.5 ml. The dose that reversibly immobilized 50% of the worms was determined and a straight line was plotted against the octanol/water partition coefficient (K) of each series. As with other animals, potency was directly related to the lipid solubility of these agents so that, for example, the ID{sub 50} for methanol was 1,000 mmol (K=0.12) whereas it was 0.17 mmol for heptanol (K=3,000). The alcohols were about 20 times more potent than the alkanes even though the latter were about 10 times more lipid soluble than the alcohols. In spite of these differences, the cut-off point was at C{sub 9} in the two series.

  15. The structure of n-alkane binary mixtures adsorbed on graphite

    Energy Technology Data Exchange (ETDEWEB)

    Espeau, Philippe [Laboratoire de Chimie Physique et Minerale, Faculte de Pharmacie, Universite Rene Descartes-Paris V, F-75006 Paris (France)]. E-mail: philippe.espeau@univ-paris5.fr; White, John W. [Research School of Chemistry, Australian National University, Canberra, ACT 0200 (Australia); Papoular, Robert J. [Laboratoire Leon Brillouin, CEA-CEN Saclay, F-91191 Gif-sur-Yvette Cedex (France)

    2005-12-15

    The thermodynamics and structure of the surface adsorbed phase in binary C15-C16 and C15-C17 n-alkane mixtures confined in graphite pores have been studied by differential scanning calorimetry and small-angle X-ray scattering. The previously observed selective adsorption of the longer alkane for chain length differences greater than five carbon atoms is verified but reduced for chain length differences less than or equal to two. With a difference in chain length of one carbon atom, Vegard's law is followed for the melting points of the adsorbed mixture and the (0 2) d-spacing is a continuous function of the mole fraction x. With a two-carbon atom difference, samples aged for 1 week have a lamellar structure for which the entities A{sub 1-x}B {sub x} try to be commensurate with the substrate. The same samples aged for 1 month show a continuous parabolic x-dependence for both the melting points and the d-spacings. An explanation in terms of selective probability of adsorption is proposed based on crystallographic considerations.

  16. Ignition of alkane-rich FACE gasoline fuels and their surrogate mixtures

    KAUST Repository

    Sarathy, Mani

    2015-01-01

    Petroleum derived gasoline is the most used transportation fuel for light-duty vehicles. In order to better understand gasoline combustion, this study investigated the ignition propensity of two alkane-rich FACE (Fuels for Advanced Combustion Engines) gasoline test fuels and their corresponding PRF (primary reference fuel) blend in fundamental combustion experiments. Shock tube ignition delay times were measured in two separate facilities at pressures of 10, 20, and 40 bar, temperatures from 715 to 1500 K, and two equivalence ratios. Rapid compression machine ignition delay times were measured for fuel/air mixtures at pressures of 20 and 40 bar, temperatures from 632 to 745 K, and two equivalence ratios. Detailed hydrocarbon analysis was also performed on the FACE gasoline fuels, and the results were used to formulate multi-component gasoline surrogate mixtures. Detailed chemical kinetic modeling results are presented herein to provide insights into the relevance of utilizing PRF and multi-component surrogate mixtures to reproduce the ignition behavior of the alkane-rich FACE gasoline fuels. The two FACE gasoline fuels and their corresponding PRF mixture displayed similar ignition behavior at intermediate and high temperatures, but differences were observed at low temperatures. These trends were mimicked by corresponding surrogate mixture models, except for the amount of heat release in the first stage of a two-stage ignition events, when observed. © 2014 The Combustion Institute.

  17. The structure of percolating lipid monolayers.

    Science.gov (United States)

    Risović, D; Frka, S; Kozarac, Z

    2012-05-01

    The lattice structure and in plane molecular organization of Langmuir monolayer of amphiphilic material is usually determined from grazing incidence X-ray diffraction (GIXD) or neutron reflectivity. Here we present results of a different approach for determination of monolayer lattice structure based on application of fractal analysis and percolation theory in combination with Brewster angle microscopy. The considerations of compressibility modulus and fractal dimension dynamics provide information on percolation threshold and consequently by application of percolation theory on the lattice structure of a monolayer. We have applied this approach to determine the monolayer lattice structures of single chain and double chain lipids. The compressibility moduli were determined from measured π-A isotherms and fractal dimensions from corresponding BAM images. The monolayer lattice structures of stearic acid, 1-hexadecanol, DPPC and DPPA, obtained in this way conform to the corresponding lattice structures determined previously by other authors using GIXD. PMID:22209411

  18. A compound-specific n-alkane δ 13C and δD approach for assessing source and delivery processes of terrestrial organic matter within a forested watershed in northern Japan

    Science.gov (United States)

    Seki, Osamu; Nakatsuka, Takeshi; Shibata, Hideaki; Kawamura, Kimitaka

    2010-01-01

    We measured molecular distributions and compound-specific hydrogen (δD) and stable carbon isotopic ratios (δ 13C) of mid- and long-chain n-alkanes in forest soils, wetland peats and lake sediments within the Dorokawa watershed, Hokkaido, Japan, to better understand sources and processes associate with delivery of terrestrial organic matter into the lake sediments. δ 13C values of odd carbon numbered C 23-C 33n-alkanes ranged from -37.2‰ to -31.5‰, while δD values of these alkanes showed a large degree of variability that ranged from -244‰ to -180‰. Molecular distributions in combination with stable carbon isotopic compositions indicate a large contribution of C3 trees as the main source of n-alkanes in forested soils whereas n-alkanes in wetland soil are exclusively derived from marsh grass and/or moss. We found that the n-alkane δD values are much higher in forest soils than wetland peat. The higher δD values in forest samples could be explained by the enrichment of deuterium in leaf and soil waters due to increased evapotranspiration in the forest or differences in physiology of source plants between wetland and forest. A δ 13C vs. δD diagram of n-alkanes among forest, wetland and lake samples showed that C 25-C 31n-alkanes deposited in lake sediments are mainly derived from tree leaves due to the preferential transport of the forest soil organic matter over the wetland or an increased contribution of atmospheric input of tree leaf wax in the offshore sites. This study demonstrates that compound-specific δD analysis provides a useful approach for better understanding source and transport of terrestrial biomarkers in a C3 plant-dominated catchment.

  19. The Tunable Hybrid Surface Phonon and Plasmon Polariton Modes in Boron Nitride Nanotube and Graphene Monolayer Heterostructures

    OpenAIRE

    SUN, Yu; Zheng, Zheng; Cheng, Jiangtao; Liu, Jiansheng

    2014-01-01

    The hybrid modes incorporating surface phonon polariton (SPhP) modes in boron nitride nanotubes (BNNTs) and surface plasmon polariton (SPP) modes in graphene monolayers are theoretically studied. The combination of the 1D BNNTs and 2D graphene monolayer further improves the modal characteristics with electrical tunability. Superior to the graphene monolayers, the proposed heterostructures supports single mode transmission with lateral optical confinement. The modal characteristics can be shif...

  20. Switchable polarization in an unzipped graphene oxide monolayer.

    Science.gov (United States)

    Noor-A-Alam, Mohammad; Shin, Young-Han

    2016-08-14

    Ferroelectricity in low-dimensional oxide materials is generally suppressed at the scale of a few nanometers, and has attracted considerable attention from both fundamental and technological aspects. Graphene is one of the thinnest materials (one atom thick). Therefore, engineering switchable polarization in non-polar pristine graphene could potentially lead to two-dimensional (2D) ferroelectric materials. In the present study, based on density functional theory, we show that an unzipped graphene oxide (UGO) monolayer can exhibit switchable polarization due to its foldable bonds between the oxygen atom and two carbon atoms underneath the oxygen. We find that a free standing UGO monolayer exhibits antiferroelectric switchable polarization. A UGO monolayer can be obtained as an intermediate product during the chemical exfoliation process of graphene. Interestingly, despite its dimensionality, our estimated polarization in a UGO monolayer is comparable to that in bulk ferroelectric materials (e.g., ferroelectric polymers). Our calculations could help realize antiferroelectric switchable polarization in 2D materials, which could find various potential applications in nanoscale devices such as sensors, actuators, and capacitors with high energy-storage density. PMID:27401944

  1. Topography and instability of monolayers near domain boundaries

    International Nuclear Information System (INIS)

    We theoretically study the topography of a biphasic surfactant monolayer in the vicinity of domain boundaries. The differing elastic properties of the two phases generally lead to a nonflat topography of 'mesas,' where domains of one phase are elevated with respect to the other phase. The mesas are steep but low, having heights of up to 10 nm. As the monolayer is laterally compressed, the mesas develop overhangs and eventually become unstable at a surface tension of about K(δc0)2 (δc0 being the difference in spontaneous curvature and K a bending modulus). In addition, the boundary is found to undergo a topography-induced rippling instability upon compression, if its line tension is smaller than about Kδc0. The effect of diffuse boundaries on these features and the topographic behavior near a critical point are also examined. We discuss the relevance of our findings to several experimental observations related to surfactant monolayers: (i) small topographic features recently found near domain boundaries; (ii) folding behavior observed in mixed phospholipid monolayers and model lung surfactants; (iii) roughening of domain boundaries seen under lateral compression; (iv) the absence of biphasic structures in tensionless surfactant films

  2. Omeprazole decreases magnesium transport across Caco-2 monolayers

    Institute of Scientific and Technical Information of China (English)

    Narongrit Thongon; Nateetip Krishnamra

    2011-01-01

    AIM: To elucidate the effect and underlying mechanisms of omeprazole action on Mg2+ transport across the intestinal epithelium. METHODS: Caco-2 monolayers were cultured in various dose omeprazole-containing media for 14 or 21 d before being inserted into a modified Ussing chamber apparatus to investigate the bi-directional Mg2+ transport and electrical parameters. Paracellular permeability of the monolayer was also observed by the dilution potential technique and a cation permeability study. An Arrhenius plot was performed to elucidate the activation energy of passive Mg2+ transport across the Caco-2 monolayers. RESULTS: Both apical to basolateral and basolateral to apical passive Mg2+ fluxes of omeprazole-treated epithelium were decreased in a dose- and time-dependent manner. Omeprazole also decreased the paracellular cation selectivity and changed the paracellular selective permeability profile of Caco-2 epithelium to Li+, Na+, K+, Rb+, and Cs+ from series Ⅶ to series Ⅵ of the Eisenman sequence. The Arrhenius plot revealed the higher activation energy for passive Mg2+ transport in omeprazoletreated epithelium than that of control epithelium, indicating that omeprazole affected the paracellular channel of Caco-2 epithelium in such a way that Mg2+ movement was impeded. CONCLUSION: Omeprazole decreased paracellular cation permeability and increased the activation energy for passive Mg2+ transport of Caco-2 monolayers that led to the suppression of passive Mg2+ absorption.

  3. Coulomb excitations of monolayer germanene

    CERN Document Server

    Shih, Po-Hsin; Wu, Jhao-Ying; Shyu, Feng-Lin; Lin, Ming-Fa

    2016-01-01

    The feature-rich electronic excitations of monolayer germanene lie in the significant spin-orbital coupling and the buckled structure. The collective and single- particle excitations are diversified by the magnitude and direction of transferred momentum, the Fermi energy and the gate voltage. There are four kinds of plasmon modes, according to the unique frequency- and momentum-dependent phase diagrams. They behave as two-dimensional acoustic modes at long wavelength. However, for the larger momenta, they might change into another kind of undamped plasmons, become the seriously suppressed modes in the heavy intraband e-h excitations, keep the same undamped plasmons, or decline and then vanish in the strong interband e-h excitations. Germanene, silicene and graphene are quite different from one another in the main features of the diverse plasmon modes.

  4. Free exciton emission and vibrations in pentacene monolayers

    Science.gov (United States)

    He, Rui

    2011-03-01

    Pentacene is a benchmark organic semiconductor material because of its potential applications in electronic and optoelectronic devices. Recently we demonstrated that optical and vibrational characterizations of pentacene films can be carried out down to the sub-monolayer limit. These milestones were achieved in highly uniform pentacene films that were grown on a compliant polymeric substrate. Films with thickness ranging from sub- monolayer to tens of monolayers were studied at low temperatures. The intensity of the free exciton (FE) luminescence band increases quadratically with the number of layers N when N is small. This quadratic dependence is explained as arising from the linear dependence of the intensity of absorption and the probability of emission on the number of layers N. Large enhancements of Raman scattering intensities at the FE resonance enable the first observations of low-lying lattice modes in the monolayers. The measured low- lying modes (in the 20 to 100 cm-1 range) display characteristic changes when going from a single monolayer to two layers. The Raman intensities by high frequency intra-molecular vibrations display resonance enhancement double-peaks when incident or scattered photon energies overlap the FE optical emission. The double resonances are about the same strength which suggests that Franck-Condon overlap integrals for the respective vibronic transitions have the same magnitude. The interference between scattering amplitudes in the Raman resonance reveals quantum coherence of the symmetry-split states (Davydov doublet) of the lowest intrinsic singlet exciton. These results demonstrate novel venues for ultra-thin film characterization and studies of fundamental physics in organic semiconductor structures. In collaboration with Nancy G. Tassi (Dupont), Graciela B. Blanchet (Nanoterra, Cambridge, MA), and Aron Pinczuk (Columbia University).

  5. Utilization of carbon isotope enrichments (ð¹³C) of alkanes as faecal markers to estimate diet composition of goats fed with heathland vegetation

    NARCIS (Netherlands)

    Ferreira, L.M.M.; Daniel, J.B.; Celaya, R.; Santos, A.S.; Osoro, K.; Rodrigues, M.A.M.; Pellikaan, W.F.

    2014-01-01

    This study aimed to evaluate the possible utilization of carbon isotope enrichments (d13C) of n-alkanes as faecal markers for estimating diet composition of goats fed with diets composed of different proportions of browse (Erica umbellata, Erica cinerea, Calluna vulgaris, Erica arborea, and Ulex gal

  6. Direct hydrodeoxygenation of raw woody biomass into liquid alkanes.

    Science.gov (United States)

    Xia, Qineng; Chen, Zongjia; Shao, Yi; Gong, Xueqing; Wang, Haifeng; Liu, Xiaohui; Parker, Stewart F; Han, Xue; Yang, Sihai; Wang, Yanqin

    2016-01-01

    Being the only sustainable source of organic carbon, biomass is playing an ever-increasingly important role in our energy landscape. The conversion of renewable lignocellulosic biomass into liquid fuels is particularly attractive but extremely challenging due to the inertness and complexity of lignocellulose. Here we describe the direct hydrodeoxygenation of raw woods into liquid alkanes with mass yields up to 28.1 wt% over a multifunctional Pt/NbOPO4 catalyst in cyclohexane. The superior performance of this catalyst allows simultaneous conversion of cellulose, hemicellulose and, more significantly, lignin fractions in the wood sawdust into hexane, pentane and alkylcyclohexanes, respectively. Investigation on the molecular mechanism reveals that a synergistic effect between Pt, NbOx species and acidic sites promotes this highly efficient hydrodeoxygenation of bulk lignocellulose. No chemical pretreatment of the raw woody biomass or separation is required for this one-pot process, which opens a general and energy-efficient route for converting raw lignocellulose into valuable alkanes. PMID:27025898

  7. Measurement of n-alkanals and hydroxyalkenals in biological samples.

    Science.gov (United States)

    Holley, A E; Walker, M K; Cheeseman, K H; Slater, T F

    1993-09-01

    A modified method was developed to measure nM levels of a range of n-alkanals and hydroxyalkenals in biological samples such as blood plasma and tissue homogenates and also in Folch lipid extracts of these samples. Butylated hydroxytoluene (BHT) and desferrioxamine (Desferal) were added to samples to prevent artifactual peroxidation. Aldehydes were reacted with 1,3-cyclohexanedione (CHD), cleaned up by solid-phase extraction on a Sep-Pak C18 cartridge and the fluorescent decahydroacridine derivatives resolved by reverse-phase high-performance liquid chromatography (HPLC) with gradient elution. A wider range of aldehydes was detected in lipid extracts of plasma and liver homogenate compared to whole (unextracted) samples. Human plasma contained nM levels of acetaldehyde, propanal, butanal, pentanal, hexanal, and heptanal. 4-Hydroxynonenal (0.93 nmol/g) and alkanals with two to six carbons (up to 7.36 nmol/g) were detected in rat liver. Recovery of aldehydes added to whole plasma or to lipid extracts of plasma was dependent on carbon chain length, varying from 95% for acetaldehyde to 8% for decanal. Recovery from biological samples was significantly less than that of standards taken through the Sep-Pak clean-up procedure, suggesting that aldehydes can bind to plasma protein and lipid components. PMID:8406128

  8. Broadband ultra-high transmission of terahertz radiation through monolayer MoS{sub 2}

    Energy Technology Data Exchange (ETDEWEB)

    Deng, Xue-Yong [Nanoscale Science and Technology Laboratory, Institute for Advanced Study, Nanchang University, Nanchang 330031 (China); Materials Science and Engineering, Nanchang University, Nanchang 330031 (China); Deng, Xin-Hua [Department of Physics, Nanchang University, Nanchang 330031 (China); Su, Fu-Hai [Key Laboratory of Materials Physics, Institute of Solid State Physics, Chinese Academy of Sciences, Hefei 230031 (China); Liu, Nian-Hua; Liu, Jiang-Tao, E-mail: jtliu@semi.ac.cn [Nanoscale Science and Technology Laboratory, Institute for Advanced Study, Nanchang University, Nanchang 330031 (China); Department of Physics, Nanchang University, Nanchang 330031 (China)

    2015-12-14

    In this study, the terahertz (THz) absorption and transmission of monolayer MoS{sub 2} with different carrier concentrations were investigated theoretically. The calculation shows that the THz absorption of monolayer MoS{sub 2} is very low even under high carrier concentrations and large incident angles. The sum of reflection and absorption losses of monolayer MoS{sub 2} is lower than that of graphene by one to three orders of magnitude. The transmission of monolayer MoS{sub 2} is higher than that of two-dimensional electron gases in traditional GaAs and InAs. The field-effect tube structure formed by monolayer MoS{sub 2}-insulation-layer-graphene is also studied. The THz absorption of graphene can reach saturation under low voltage by tuning the voltage between MoS{sub 2} and graphene layers in the structure. The maximum THz absorption of monolayer MoS{sub 2} is approximately 5%. Thus, monolayer MoS{sub 2} is a promising candidate for THz transparent electrodes.

  9. Morphological transitions in polymer monolayers under compression.

    Science.gov (United States)

    Srivastava, S; Basu, J K; Sprung, M; Wang, J

    2009-05-01

    We present a systematic investigation of morphological transitions in poly vinylacetate Langmuir monolayers. On compression, the polymer monolayer is converted to a continuous membrane with a thickness of approximately 2-3 nm. Above a certain surface concentration the monolayer, on water, undergoes a morphological transition-buckling, leading to formation of striped patterns of period of lambda(b) approximately 160 nm, as determined from in situ grazing incidence small angle x-ray scattering measurements. The obtained value is much smaller than what has been typically observed for Langmuir monolayers on water or thin films on soft substrates. Using existing theories for buckling of fluidlike films on fluid substrates, we obtain very low values of bending rigidity and Young's modulus of the polymer monolayer compared to that observed earlier for lipid or polymeric monolayers. Since buckling in these monolayers occurs only above a certain surface concentration, we have looked at the possibility that the buckling in these films occurs due to changes in their mechanical properties under compression. Using the model of Huang and Suo of buckling of solidlike films on viscoelastic substrates, we find values of the mechanical properties, which are much closer to the bulk values but still significantly lower. Although the reduction could be along the lines of what has been observed earlier for ultrathin polymer film or surface layers of polymers, the possibility of micromechanical effects also determining the buckling in such polymer monolayers cannot be ruled out. We have provided possible explanation of the buckling of the poly vinylacetate monolayers in terms of the change in isothermal compression modulus with surface concentration. PMID:19425809

  10. Electrochemical Deposition Of Thiolate Monolayers On Metals

    Science.gov (United States)

    Porter, Marc D.; Weissharr, Duane E.

    1995-01-01

    Electrochemical method devised for coating metal (usually, gold) surfaces with adherent thiolate monolayers. Affords greater control over location and amount of material deposited and makes it easier to control chemical composition of deposits. One important potential use for this method lies in fabrication of chemically selective thin-film resonators for microwave oscillators used to detect pollutants: monolayer formulated to bind selectively pollutant chemical species of interest, causing increase in mass of monolayer and corresponding decrease in frequency of resonance. Another important potential use lies in selective chemical derivatization for purposes of improving adhesion, lubrication, protection against corrosion, electrocatalysis, and electroanalysis.

  11. Geomicrobiological linkages between short-chain alkane consumption and sulfate reduction rates in seep sediments.

    Directory of Open Access Journals (Sweden)

    Arpita eBose

    2013-12-01

    Full Text Available Marine hydrocarbon seeps are ecosystems that are rich in methane, and, in some cases, short-chain (C2-C5 and longer alkanes. C2-C4 alkanes such as ethane, propane and butane can be significant components of seeping fluids. Some sulfate-reducing microbes oxidize short-chain alkanes anaerobically, and may play an important role in both the competition for sulfate and the local carbon budget. To better understand the anaerobic oxidation of short-chain n-alkanes coupled with sulfate-reduction, hydrocarbon-rich sediments from the Gulf of Mexico were amended with artificial, sulfate-replete seawater and one of four n-alkanes (C1-C4 then incubated under strict anaerobic conditions. Measured rates of alkane oxidation and sulfate reduction closely follow stoichiometric predictions that assume the complete oxidation of alkanes to CO2 (though other sinks for alkane carbon likely exist. Changes in the δ13C of all the alkanes in the reactors show enrichment over the course of the incubation, with the C3 and C4 incubations showing the greatest enrichment (4.4‰ and 4.5‰ respectively. The concurrent depletion in the δ13C of dissolved inorganic carbon (DIC implies a transfer of carbon from the alkane to the DIC pool (-3.5 and -6.7‰ for C3 and C4 incubations, respectively. Microbial community analyses reveal that certain members of the class Deltaproteobacteria are selectively enriched as the incubations degrade C1-C4 alkanes. Phylogenetic analyses indicate that distinct phylotypes are enriched in the ethane reactors, while phylotypes in the propane and butane reactors align with previously identified C3-C4 alkane-oxidizing sulfate-reducers. These data further constrain the potential influence of alkane oxidation on sulfate reduction rates in cold hydrocarbon-rich sediments, provide insight into their contribution to local carbon cycling, and illustrate the extent to which short-chain alkanes can serve as electron donors and govern microbial community

  12. Near-Edge X-ray Absorption Fine Structure Spectroscopy of Diamondoid Thiol Monolayers on Gold

    Energy Technology Data Exchange (ETDEWEB)

    Willey, T M; Fabbri, J; Lee, J I; Schreiner, P; Fokin, A A; Tkachenko, B A; Fokina, N A; Dahl, J; Carlson, B; Vance, A L; Yang, W; Terminello, L J; van Buuren, T; Melosh, N

    2007-11-27

    Diamondoids, hydrocarbon molecules with cubic-diamond-cage structures, have unique properties with potential value for nanotechnology. The availability and ability to selectively functionalize this special class of nanodiamond materials opens new possibilities for surface-modification, for high-efficiency field emitters in molecular electronics, as seed crystals for diamond growth, or as robust mechanical coatings. The properties of self-assembled monolayers (SAMs) of diamondoids are thus of fundamental interest for a variety of emerging applications. This paper presents the effects of thiol substitution position and polymantane order on diamondoid SAMs on gold using near-edge X-ray absorption fine structure spectroscopy (NEXAFS) and X-ray photoelectron spectroscopy (XPS). A framework to determine both molecular tilt and twist through NEXAFS is presented and reveals highly ordered diamondoid SAMs, with the molecular orientation controlled by the thiol location. C 1s and S 2p binding energies are lower in adamantane thiol than alkane thiols on gold by 0.67 {+-} 0.05 eV and 0.16 {+-} 0.04 eV respectively. These binding energies vary with diamondoid monolayer structure and thiol substitution position, consistent with different amounts of steric strain and electronic interaction with the substrate. This work demonstrates control over the assembly, in particular the orientational and electronic structure, providing a flexible design of surface properties with this exciting new class of diamond clusters.

  13. Chain length dependent alkane/β-cyclodextrin nonamphiphilic supramolecular building blocks.

    Science.gov (United States)

    Zhou, Chengcheng; Huang, Jianbin; Yan, Yun

    2016-02-01

    In this work we report the chain length dependent behavior of the nonamphiphilic supramolecular building blocks based on the host-guest inclusion complexes of alkanes and β-cyclodextrins (β-CD). (1)H NMR, ESI-MS, and SAXS measurements verified that upon increasing the chain length of alkanes, the building blocks for vesicle formation changed from channel type 2alkane@2β-CD via channel type alkane@2β-CD to non-channel type 2alkane@2β-CD. FT-IR and TGA experiments indicated that hydrogen bonding is the extensive driving force for vesicle formation. It revealed that water molecules are involved in vesicle formation in the form of structural water. Upon changing the chain length, the average number of water molecules associated with per building block is about 16-21, depending on the chain length. PMID:26660592

  14. Molecular simulation of the adsorption of linear alkane mixtures in pillared layered materials

    Institute of Scientific and Technical Information of China (English)

    LI Wen-zhuo; CHE Yu-liang; LIU Zi-yang; ZHANG Dan

    2007-01-01

    The adsorption isotherms of mixtures of linear alkanes, involving n-pentane, n-hexane, and n-heptane in pillared layered materials (PLMs) with three different porosities ψ=0.98, 0.94 and 0.87, and three pore widths H=1.02, 1.70 and 2.38 nm attemperature T=300 K were simulated by using configurational-bias Monte Carlo (CBMC) techniques in grand canonical ensemble. A grid model was employed to calculate the interaction between a fluid molecule and two layered boards here. For alkane mixtures, the n-heptane, the longest chain component in alkane mixtures, is preferentially adsorbed at low pressures, with its adsorption increasing and then decreasing as the pressure increases continuously while the n-pentane, the shortest chain component in alkane mixtures, is still adsorbed at high pressures; the adsorption of the longest chain component of alkane mixtures increases as the pore width and the porosity of PLMs increase.

  15. Possible origin of n -alkanes with a remarkable even-to-odd predominance in recent marine sediments

    Science.gov (United States)

    Nishimura, Mitsugu; Baker, Earl W.

    1986-02-01

    N- alkane distributions with a remarkable even-to-odd predominance (C 16-C 24) were found in marine surface sediments. The previously proposed diagenetic reduction of the corresponding n- fatty acids could not be considered as a source for these N- alkane. Based on a comparison of compositional features of n- alkane, n- fatty acid and n- alcohol distributions, carbon isotope analyses, and other geochemical parameters, the data indicate that the even-predominant n- alkanes were derived directly from marine bacteria.

  16. Nonequilibrium molecular dynamics simulation of the rheology of linear and branched alkanes

    Energy Technology Data Exchange (ETDEWEB)

    Cui, S.T.; Cummings, P.T.; Cochran, H.D.; Moore, J.D.; Gupta, S.A. [Univ. of Tennessee, Knoxville, TN (United States). Dept. of Chemical Engineering]|[Oak Ridge National Lab., TN (United States). Chemical Technology Div.

    1998-03-01

    Liquid alkanes in the molecular weight range of C{sub 20}-C{sub 40} are the main constituents of lubricant basestocks, and their rheological properties are therefore of great concern in industrial lubricant applications. Using massively parallel supercomputers and an efficient parallel algorithm, the authors have carried out systematic studies of the rheological properties of a variety of model liquid alkanes ranging from linear to singly branched and multiply branched alkanes. They aim to elucidate the relationship between the molecular architecture and the viscous behavior. Nonequilibrium molecular dynamics simulations have been carried out for n-decane (C{sub 10}H{sub 22}), n-hexadecane (C{sub 16}H{sub 34}), n-tetracosane (C{sub 24}H{sub 50}), 10-n-hexylnonadecane (C{sub 25}H{sub 52}), and squalane (2, 6, 10, 15, 19, 23-hexamethyltetracosane, C{sub 30}H{sub 62}). At a high strain rate, the viscosity shows a power-law shear thinning behavior over several orders of magnitude in strain rate, with exponents ranging from {minus}0.33 to {minus}0.59. The power-law shear thinning is shown to be closely related to the ordering of the molecules. The molecular architecture is shown to have a significant influence on the power-law exponent. At a low strain rate, the viscosity behavior changes to a Newtonian plateau, whose accurate determination has been elusive in previous studies. The molecular order in this regime is essentially that of the equilibrium system, a signature of the linear response. The Newtonian plateau is verified by independent equilibrium molecular dynamics simulations using the Green-Kubo method. The reliable determination of the Newtonian viscosity from nonequilibrium molecular simulation permits us to calculate the viscosity index for squalane. The viscosity index is a widely used property to characterize the lubricant`s temperature performance, and the studies represent the first approach toward its determination by molecular simulation.

  17. Topological Phase Diagrams of Bulk and Monolayer TiS2−xTex

    KAUST Repository

    Zhu, Zhiyong

    2013-02-12

    With the use of ab initio calculations, the topological phase diagrams of bulk and monolayer TiS2−xTex are established. Whereas bulk TiS2−xTex shows two strong topological phases [1;(000)] and [1;(001)] for 0.44monolayer is topologically nontrivial for 0.48monolayer, TiS2−xTex is a unique system for studying topological phases in three and two dimensions simultaneously.

  18. Genes involved in alkane degradation in the Alcanivorax hongdengensis strain A-11-3

    Energy Technology Data Exchange (ETDEWEB)

    Wang, Wanpeng [State Oceanic Administration, Xiamen (China). Key Lab. of Marine Biogenetic Resources; Xiamen Univ. (China). School of Life Sciences; Shao, Zongze [State Oceanic Administration, Xiamen (China). Key Lab. of Marine Biogenetic Resources

    2012-04-15

    Alcanivorax hongdengensis A-11-3 is a newly identified type strain isolated from the surface water of the Malacca and Singapore Straits that can degrade a wide range of alkanes. To understand the degradation mechanism of this strain, the genes encoding alkane hydroxylases were obtained by PCR screening and shotgun sequencing of a genomic fosmid library. Six genes involved in alkane degradation were found, including alkB1, alkB2, p450-1, p450-2, p450-3 and almA. Heterogeneous expression analysis confirmed their functions as alkane oxidases in Pseudomonas putida GPo12 (pGEc47{delta}B) or Pseudomonas fluorescens KOB2{delta}1. Q-PCR revealed that the transcription of alkB1 and alkB2 was enhanced in the presence of n-alkanes C{sub 12} to C{sub 24}; three p450 genes were up-regulated by C{sub 8}-C{sub 16} n-alkanes at different levels, whereas enhanced expression of almA was observed when strain A-11-3 grew with long-chain alkanes (C{sub 24} to C{sub 36}). In the case of branched alkanes, pristane significantly enhanced the expression of alkB1, p450-3 and almA. The six genes enable strain A-11-3 to degrade short (C{sub 8}) to long (C{sub 36}) alkanes that are straight or branched. The ability of A. hongdengensis A-11-3 to thrive in oil-polluted marine environments may be due to this strain's multiple systems for alkane degradation and its range of substrates. (orig.)

  19. Heterointerface Screening Effects between Organic Monolayers and Monolayer Transition Metal Dichalcogenides.

    Science.gov (United States)

    Zheng, Yu Jie; Huang, Yu Li; Chen, Yifeng; Zhao, Weijie; Eda, Goki; Spataru, Catalin D; Zhang, Wenjing; Chang, Yung-Huang; Li, Lain-Jong; Chi, Dongzhi; Quek, Su Ying; Wee, Andrew Thye Shen

    2016-02-23

    The nature and extent of electronic screening at heterointerfaces and their consequences on energy level alignment are of profound importance in numerous applications, such as solar cells, electronics etc. The increasing availability of two-dimensional (2D) transition metal dichalcogenides (TMDs) brings additional opportunities for them to be used as interlayers in "van der Waals (vdW) heterostructures" and organic/inorganic flexible devices. These innovations raise the question of the extent to which the 2D TMDs participate actively in dielectric screening at the interface. Here we study perylene-3,4,9,10-tetracarboxylic dianhydride (PTCDA) monolayers adsorbed on single-layer tungsten diselenide (WSe2), bare graphite, and Au(111) surfaces, revealing a strong dependence of the PTCDA HOMO-LUMO gap on the electronic screening effects from the substrate. The monolayer WSe2 interlayer provides substantial, but not complete, screening at the organic/inorganic interface. Our results lay a foundation for the exploitation of the complex interfacial properties of hybrid systems based on TMD materials. PMID:26792247

  20. Heterointerface Screening Effects between Organic Monolayers and Monolayer Transition Metal Dichalcogenides

    KAUST Repository

    Zheng, Yu Jie

    2016-01-21

    © 2016 American Chemical Society. The nature and extent of electronic screening at heterointerfaces and their consequences on energy level alignment are of profound importance in numerous applications, such as solar cells, electronics etc. The increasing availability of two-dimensional (2D) transition metal dichalcogenides (TMDs) brings additional opportunities for them to be used as interlayers in "van der Waals (vdW) heterostructures" and organic/inorganic flexible devices. These innovations raise the question of the extent to which the 2D TMDs participate actively in dielectric screening at the interface. Here we study perylene-3,4,9,10-tetracarboxylic dianhydride (PTCDA) monolayers adsorbed on single-layer tungsten diselenide (WSe2), bare graphite, and Au(111) surfaces, revealing a strong dependence of the PTCDA HOMO-LUMO gap on the electronic screening effects from the substrate. The monolayer WSe2 interlayer provides substantial, but not complete, screening at the organic/inorganic interface. Our results lay a foundation for the exploitation of the complex interfacial properties of hybrid systems based on TMD materials.

  1. Accurate Molecular Dimensions from Stearic Acid Monolayers.

    Science.gov (United States)

    Lane, Charles A.; And Others

    1984-01-01

    Discusses modifications in the fatty acid monolayer experiment to reduce the inaccurate moleculary data students usually obtain. Copies of the experimental procedure used and a Pascal computer program to work up the data are available from the authors. (JN)

  2. Large Friction Anisotropy of a Polydiacetylene Monolayer

    International Nuclear Information System (INIS)

    Friction force microscopy measurements of a polydiacetylene monolayer film reveal a 300% friction anisotropy that is correlated with the film structure. The film consists of a monolayer of the red form of N-(2-ethanol)- 10,12 pentacosadiynamide, prepared on a Langmuir trough and deposited on a mica substrate. As confirmed by atomic force microscopy and fluorescence microscopy, the monolayer consists of domains of linearly oriented conjugated backbones with pendant hydrocarbon side chains above and below the backbones. Maximum friction occurs when the sliding direction is perpendicular to the backbone. We propose that the backbones impose anisotropic packing of the hydrocarbon side chains which leads to the observed friction anisotropy. Friction anisotropy is therefore a sensitive, optically-independent indicator of polymer backbone direction and monolayer structural properties

  3. Mediated Electron Transfer at Redox Active Monolayers. Part 4: Kinetics of Redox Enzymes Coupled With Electron Mediators

    Directory of Open Access Journals (Sweden)

    Michael E.G. Lyons

    2003-01-01

    Full Text Available A detailed kinetic analysis of the pertinent physical processes underlying the operation of enzyme electrodes immobilized within alkane thiol self assembled monolayers is developed. These electrodes utilize a soluble mediator, which partitions into the monolayer, regenerates the active catalytic form of the enzyme and is re-oxidized at the underlying support electrode surface giving rise to a current which reflects kinetic events at the enzyme surface. Both the enzyme/substrate and enzyme mediator kinetics have been quantified fully in terms of a ping-pong mechanism for the former and Michaelis-Menten kinetics for the latter. The effect of substrate and mediator diffusion in solution have also been specifically considered and the latter processes have been shown to result in a complex expression for the reaction flux. Four limiting kinetic cases have been enumerated and simple expressions for the reaction flux in each of these rate limiting situations have been developed. Kinetic case diagrams have been presented as an aid to mechanistic diagnosis. The complicating effects of diffusive loss of reduced mediator from the enzyme layer have also been examined and the relation between the observed flux corresponding to reduced mediator oxidation at the support electrode and the substrate reaction flux in the enzyme layer have been quantified in terms of an efficiency factor. Results extracted from recently published practical realizations of immobilized monolayer enzyme systems have been discussed in the context of the proposed model analysis.

  4. Diversity and abundance of n-alkane degrading bacteria in the near surface soils of a Chinese onshore oil and gas field

    Science.gov (United States)

    Xu, K.; Tang, Y.; Ren, C.; Zhao, K.; Sun, Y.

    2012-10-01

    Alkane degrading bacteria have long been used as an important biological indicator for oil and gas prospecting, but their ecological characteristics in hydrocarbon microseep habitats are still poorly understood. In this study, the diversity and abundance of n-alkane degrading bacterial community in the near surface soils of a Chinese onshore oil and gas field were investigated using molecular techniques. Terminal restriction fragment length polymorphism (T-RFLP) analyses in combination with cloning and sequencing of alkB genes revealed that trace amount of volatile hydrocarbons migrated from oil and gas reservoirs caused a shift of the n-alkane degrading bacterial community from Gram-positive bacteria (Mycobacterium and Rhodococcus) to Gram-negative genotypes (Alcanivorax and Acinetobacter). Real-time PCR results furthermore showed that the abundance of alkB genes increased substantially in the surface soils underlying oil and gas reservoirs even though only low or undetectable concentrations of hydrocarbons were measured in these soils due to efficient microbial degradation. Our findings broadened the knowledge on the ecological characteristics of alkane degrading community in hydrocarbon microseeps and may provide a new approach for microbial prospecting for oil and gas (MPOG).

  5. Whole-cell bio-oxidation of n-dodecane using the alkane hydroxylase system of P. putida GPo1 expressed in E. coli

    DEFF Research Database (Denmark)

    Grant, Chris; Woodley, John; Baganz, Frank

    2011-01-01

    The alkane-1-monoxygenase (alkB) complex of Pseudomonas putida GPo1 has been extensively studied in the past and shown to be capable of oxidising aliphatic C5–C12 alkanes to primary alcohols both in the wild-type organism by growth on C5–C12 alkanes as sole carbon source and in vitro. Despite this......, successful n-dodecane oxidation for the production of 1-dodecanol or dodecanoic acid has proven elusive in the past when using alkB-expressing recombinants. This article demonstrates, for the first time in vivo, by using the Escherichia coli GEC137 pGEc47ΔJ strain, that n-dodecane oxidation using this enzyme......-octane (21μmol/min/gdcw); similar to the 5-fold difference observed between wild-type growth rates using the two respective alkanes as sole carbon source. Despite this, both total volumetric rate and final yield exceeded n-octane oxidation by 3.5-fold under the same conditions, due to the lower toxicity of n...

  6. Diversity and abundance of n-alkane degrading bacteria in the near surface soils of a Chinese onshore oil and gas field

    Directory of Open Access Journals (Sweden)

    K. Zhao

    2012-10-01

    Full Text Available Alkane degrading bacteria have long been used as an important biological indicator for oil and gas prospecting, but their ecological characteristics in hydrocarbon microseep habitats are still poorly understood. In this study, the diversity and abundance of n-alkane degrading bacterial community in the near surface soils of a Chinese onshore oil and gas field were investigated using molecular techniques. Terminal restriction fragment length polymorphism (T-RFLP analyses in combination with cloning and sequencing of alkB genes revealed that trace amount of volatile hydrocarbons migrated from oil and gas reservoirs caused a shift of the n-alkane degrading bacterial community from Gram-positive bacteria (Mycobacterium and Rhodococcus to Gram-negative genotypes (Alcanivorax and Acinetobacter. Real-time PCR results furthermore showed that the abundance of alkB genes increased substantially in the surface soils underlying oil and gas reservoirs even though only low or undetectable concentrations of hydrocarbons were measured in these soils due to efficient microbial degradation. Our findings broadened the knowledge on the ecological characteristics of alkane degrading community in hydrocarbon microseeps and may provide a new approach for microbial prospecting for oil and gas (MPOG.

  7. Mass spectrometric analysis of monolayer protected nanoparticles

    Science.gov (United States)

    Zhu, Zhengjiang

    Monolayer protected nanoparticles (NPs) include an inorganic core and a monolayer of organic ligands. The wide variety of core materials and the tunable surface monolayers make NPs promising materials for numerous applications. Concerns related to unforeseen human health and environmental impacts of NPs have also been raised. In this thesis, new analytical methods based on mass spectrometry are developed to understand the fate, transport, and biodistributions of NPs in the complex biological systems. A laser desorption/ionization mass spectrometry (LDI-MS) method has been developed to characterize the monolayers on NP surface. LDI-MS allows multiple NPs taken up by cells to be measured and quantified in a multiplexed fashion. The correlations between surface properties of NPs and cellular uptake have also been explored. LDI-MS is further coupled with inductively coupled plasma mass spectrometry (ICP-MS) to quantitatively measure monolayer stability of gold NPs (AuNPs) and quantum dots (QDs), respectively, in live cells. This label-free approach allows correlating monolayer structure and particle size with NP stability in various cellular environments. Finally, uptake, distribution, accumulation, and excretion of NPs in higher order organisms, such as fish and plants, have been investigated to understand the environmental impact of nanomaterials. The results indicate that surface chemistry is a primary determinant. NPs with hydrophilic surfaces are substantially less toxic and present a lower degree of bioaccumulation, making these nanomaterials attractive for sustainable nanotechnology.

  8. Shock tube measurements of the rate constants for seven large alkanes+OH

    KAUST Repository

    Badra, Jihad

    2015-01-01

    Reaction rate constants for seven large alkanes + hydroxyl (OH) radicals were measured behind reflected shock waves using OH laser absorption. The alkanes, n-hexane, 2-methyl-pentane, 3-methyl-pentane, 2,2-dimethyl-butane, 2,3-dimethyl-butane, 2-methyl-heptane, and 4-methyl-heptane, were selected to investigate the rates of site-specific H-abstraction by OH at secondary and tertiary carbons. Hydroxyl radicals were monitored using narrow-line-width ring-dye laser absorption of the R1(5) transition of the OH spectrum near 306.7 nm. The high sensitivity of the diagnostic enabled the use of low reactant concentrations and pseudo-first-order kinetics. Rate constants were measured at temperatures ranging from 880 K to 1440 K and pressures near 1.5 atm. High-temperature measurements of the rate constants for OH + n-hexane and OH + 2,2-dimethyl-butane are in agreement with earlier studies, and the rate constants of the five other alkanes with OH, we believe, are the first direct measurements at combustion temperatures. Using these measurements and the site-specific H-abstraction measurements of Sivaramakrishnan and Michael (2009) [1,2], general expressions for three secondary and two tertiary abstraction rates were determined as follows (the subscripts indicate the number of carbon atoms bonded to the next-nearest-neighbor carbon): S20=1.58×10-11exp(-1550K/T)cm3molecule-1s-1(887-1327K)S30=2.37×10-11exp(-1850K/T)cm3molecule-1s-1(887-1327K)S21=4.5×10-12exp(-793.7K/T)cm3molecule-1s-1(833-1440K)T100=2.85×10-11exp(-1138.3K/T)cm3molecule-1s-1(878-1375K)T101=7.16×10-12exp(-993K/T)cm3molecule-1s-1(883-1362K) © 2014 The Combustion Institute.

  9. The Effect of Terminal Substitution on the Helical Carbon Structure of Fluoro-Alkane Chains: a Pure Rotational Study of CH2OH-Cn-1F2n-1 (n = 4, 5,& 6)

    Science.gov (United States)

    Schwartz, Aaron Z. A.; Maturo, Mark P.; Obenchain, Daniel A.; Cooke, S. A.

    2016-06-01

    Continuing a series of studies to investigate the change in structure of hydrocarbons as the amount of fluorination is increased to varying degrees of substitution, we present a survey on the change in the helical nature of the fluorinated carbon backbone when a -CH2OH group is substituted for a terminal - CF3 group. Spectra for 1H,1H-heptafluorobutan-1-ol, 1H,1H-nonafluoropentan-1-ol, and 1H,1H-undecafluorohexan-1-ol were collected separately using a chirped-pulse FTMW spectrometer in the range of 7-13 GHz. Only one conformation was observed for each molecule. Additional measurements of the 1H,1H-heptafluorobutan-1-ol were completed using a Balle-Flygare cavity instrument. Assignments of the singly-substituted 13C isotopologues of the 1H,1H-heptafluorobutan-1-ol were also measured. A comparison of both ab initio and experimental structures will be presented.

  10. A Quantitative Structure Property Relationship for Prediction of Flash Point of Alkanes Using Molecular Connectivity Indices

    Institute of Scientific and Technical Information of China (English)

    Morteza Atabati; Reza Emamalizadeh

    2013-01-01

    Many structure-property/activity studies use graph theoretical indices,which are based on the topological properties of a molecule viewed as a graph.Since topological indices can be derived directly from the molecular structure without any experimental effort,they provide a simple and straightforward method for property prediction.In this work the flash point of alkanes was modeled by a set of molecular connectivity indices (x),modified molecular connectivity indices (mx(1)h) and valance molecular connectivity indices (mxv),with mxv calculated using the hydrogen perturbation.A stepwise Multiple Linear Regression (MLR) method was used to select the best indices.The predicted flash points are in good agreement with the experimental data,with the average absolute deviation 4.3 K.

  11. Mass transfer and adsorption equilibrium for low volatility alkanes in BPL activated carbon.

    Science.gov (United States)

    Wang, Yu; Mahle, John J; Furtado, Amanda M B; Glover, T Grant; Buchanan, James H; Peterson, Gregory W; LeVan, M Douglas

    2013-03-01

    The structure of a molecule and its concentration can strongly influence diffusional properties for transport in nanoporous materials. We study mass transfer of alkanes in BPL activated carbon using the concentration-swing frequency response method, which can easily discriminate among mass transfer mechanisms. We measure concentration-dependent diffusion rates for n-hexane, n-octane, n-decane, 2,7-dimethyloctane, and cyclodecane, which have different carbon numbers and geometries: straight chain, branched chain, and cyclic. Micropore diffusion is determined to be the controlling mass transfer resistance except at low relative saturation for n-decane, where an external mass transfer resistance also becomes important, showing that the controlling mass transfer mechanism can change with system concentration. Micropore diffusion coefficients are found to be strongly concentration dependent. Adsorption isotherm slopes obtained from measured isotherms, the concentration-swing frequency response method, and a predictive method show reasonably good agreement.

  12. ELECTROCATALYSIS ON SURFACES MODIFIED BY METAL MONOLAYERS DEPOSITED AT UNDERPOTENTIALS.

    Energy Technology Data Exchange (ETDEWEB)

    ADZIC,R.

    2000-12-01

    The remarkable catalytic properties of electrode surfaces modified by monolayer amounts of metal adatoms obtained by underpotential deposition (UPD) have been the subject of a large number of studies during the last couple of decades. This interest stems from the possibility of implementing strictly surface modifications of electrocatalysts in an elegant, well-controlled way, and these bi-metallic surfaces can serve as models for the design of new catalysts. In addition, some of these systems may have potential for practical applications. The UPD of metals, which in general involves the deposition of up to a monolayer of metal on a foreign substrate at potentials positive to the reversible thermodynamic potential, facilitates this type of surface modification, which can be performed repeatedly by potential control. Recent studies of these surfaces and their catalytic properties by new in situ surface structure sensitive techniques have greatly improved the understanding of these systems.

  13. Photoluminescence and photocurrent measurement in monolayer MoTe2

    Science.gov (United States)

    Bie, Ya-Qing; Grosso, Gabriele; Efetov, Dmitri; Navarro-Moratalla, Efren; Englund, Dirk; Jarillo-Herrero, Pablo

    2015-03-01

    2D transition metal dichalcogenides (2D-TMD), such as MoS2, WS2, WSe2, MoSe2, have been verified with many remarkable physical properties including the indirect to direct band transition and valley dependent spin polarization. As one of the 2D-TMD family member, monolayer 2H-MoTe2 is proved to be a direct bandgap semicoductor with strong spin orbital interaction and a significantly low bandgap ~ 1.10eV. However, the effect of the enhanced coulomb interaction arising from reduced dielectric screening in monolayer MoTe2 has yet to be experimentally demonstrated. Here we employ the near infrared (NIR) photoluminescence and photocurrent measurement to study the quasi-particle interactions at different carrier concentration. This study sheds light on manipulating excitons in MoTe2 and designing highly efficient NIR optoelectronic devices.

  14. Soil n-alkane δD and Branched GDGTs Distributions Track Elevation-induced Precipitation and Temperature Changes along the South Central Andes (Argentina)

    Science.gov (United States)

    Nieto-Moreno, V.; Rohrmann, A.; van der Meer, M.; S Sinninghe Damsté, J.; Sachse, D.; Tofelde, S.; Niedermeyer, E. M.; Strecker, M. R.; Mulch, A.

    2015-12-01

    Orogenic surface uplift and topographic evolution of tectonically active mountain belts exert a strong impact on climatic teleconnections and Earth surface processes, including changes in global atmospheric circulation patterns, erosion rates, distribution of biomes, and precipitation patterns. Hence, quantifying the driving processes shaping the evolution of topography in ancient and active orogens is required in order to disentangle the dynamic interactions and feedbacks among surface uplift, climate, erosion and sedimentation. The south central Andes of Argentina provide a particularly suitable setting to study the interplay between the tectonic and climatic evolution of an actively subduction orogen over short and long time-scales. We present δD values of soil-derived n-alkane and brGDGTs distributions to assess their suitability for paleoelevation reconstructions in the southern central Andes. We collected soil samples from two different environmental and hydrological gradients, across the hillslope (26-28°S) and along a river-valley (22-24°S) of two individual mountain ranges. δD n-alkane and brGDGTs distributions are both linearly related with elevation and may be used for paleoaltimetry studies along the windward flanks of the south central Andes. δD n-alkane and brGDGT-derived temperature lapse rates broadly follow regional lapse rates along steep orographic fronts. The observed lapse rates are lower than the annual mean values of satellite-derived temperatures but approach those of temperature loggers along each transect. Instead, δD n-alkane lapse rates are in line with regional stream-water data. These linear relationships along the windward slopes break down when entering the internally drained part of the Puna plateau. Our data document that δD n-alkane and brGDGTs distributions can be used over time scales relevant for paleoclimate/-altimetry reconstructions but also stress that such reconstructions require knowledge of the depositional

  15. Combined atomic force microscopy (AFM), X-ray photoelectron spectroscopy (XPS) and quartz crystal microbalance (QCM) studies of glucose oxidase (GOx) immobilised onto self-assembled monolayer on the gold film

    International Nuclear Information System (INIS)

    In fabrication of biosensors, self-assembled monolayers (SAM) are an attractive method of immobilising enzymes at electrode surface since it allows precise control over the amount and spatial distribution of the immobilized enzyme. The covalent attachment of glucose oxidase (GOx) to a carboxylic terminated SAM chemisorbed onto gold films was achieved via carbodiimide activation of the carboxylic acids to a reactive intermediate susceptible to nucleophilic attack by amines on free lysine chains of the enzyme. Atomic force microscopy (AFM), X-ray photoelectron spectroscopy (XPS) and quartz crystal microbalance (QCM) measurements were used for characterisation of GOx modified gold surfaces. Tapping mode AFM studies have revealed that GOx molecules form slightly disordered arrays of pentagonal or hexagonal clusters. Observed features of immobilised GOx are distributed as a submonolayer on the SAM surface which has allowed visualisation of native and unfolded enzyme structure. The presence of the SAM and enzyme on the gold surface was detected by XPS spectroscopy. Spectra show typical peaks for the C 1s, O 1s and N 1s regions. A kinetic study of the adsorption of GOx onto activated SAM using in-situ QCM allowed determination the amount of immobilised GOx on the layer and consequently the optimal immobilisation conditions. Performance parameters of the biosensor such as sensitivity to glucose concentration as a function of enzyme loading were evaluated amperometrically using the redox mediator p-benzoquinone

  16. Elucidating electronic transitions from σ orbitals of liquid n- and branched alkanes by far-ultraviolet spectroscopy and quantum chemical calculations.

    Science.gov (United States)

    Morisawa, Yusuke; Tachibana, Shin; Ehara, Masahiro; Ozaki, Yukihiro

    2012-12-01

    Attenuated total reflection far-ultraviolet (ATR-FUV) spectra containing Rydberg states of n-alkanes (C(m)H(2m+2); m varies in the range 5-9) and branched alkanes observed in the liquid phase were investigated by quantum chemical calculations with the aim of elucidating electronic transitions from σ orbitals of liquid n- and branched alkanes. New assignments are proposed based on the time-dependent density functional theory (TD-DFT) and symmetry-adapted cluster configuration interaction (SAC-CI) calculations, and the differences in these spectra are analyzed in detail. The FUV spectra of n-alkanes show a broad asymmetric feature near 8.3 eV. The strong band at ∼8.3 eV shows a red shift with a significant increase in intensity as the carbon chain length increases, which is attributed to the overlapping transitions from the third (or fourth) highest occupied molecular orbitals HOMO-2 (or HOMO-3) and HOMO-1 to Rydberg 3p(y) by the TD-DFT and SAC-CI calculations. This band was previously assigned to the overlap of two peaks arising from the transition from the HOMO to 3p and from the HOMO-1 to 3s based on their term values. Although the most intense transition, T1, is from HOMO-2 for m = 5 and 6 and HOMO-3 for m varying in the range of 7-9, the shape of Kohn-Sham molecular orbital for T1 is similar among the all-alkanes investigated. The theoretical result also has demonstrated that the red shift originates in both stabilization of the Rydberg 3p(y) and destabilization of the occupied orbitals. The intensity of the shoulder at 7.7 eV drastically increases in the spectra of the branched alkanes, especially for those with quaternary carbon atoms such as 2,2-dimethyl butane. This increase in intensity is caused by a reduction in symmetry in the branched alkanes, which leads the forbidden transitions to Rydberg 3s to allowed transitions. In this way, the present study has provided new insight into the existence of their Rydberg transitions and the shape of the relevant

  17. Chiral Discrimination in N-(O, O-dialkyl)phosphoamino Acid Monolayers at the Air-water Interface

    Institute of Scientific and Technical Information of China (English)

    2000-01-01

    In this paper, chiral discrimination in N-(O,O-dialkyl)phosphoamino acid monolayers at the air/water interface was studied and it was revealed that the D:L=1:1 racemic monolayer of N-(O, O-dihexadecyl)phosphoalanine is packed more densely in solid phase while shows a higher LE to LC transition pressure than the enantiomeric ones.

  18. Fluorescently labeled pulmonary surfactant protein C in spread phospholipid monolayers.

    OpenAIRE

    Nag, K.; Perez-Gil, J.; Cruz, A; Keough, K M

    1996-01-01

    Pulmonary surfactant, a lipid-protein complex, secreted into the fluid lining of lungs prevents alveolar collapse at low lung volumes. Pulmonary surfactant protein C (SP-C), an acylated, hydrophobic, alpha-helical peptide, enhances the surface activity of pulmonary surfactant lipids. Fluorescein-labeled SP-C (F-SP-C) (3, 6, 12 wt%) in dipalmitoylphosphatidylcholine (DPPC), and DPPC:dipalmitoylphosphatidylglycerol (DPPG) [DPPC:DPPG 7:3 mol/mol] in spread monolayers was studied by epifluorescen...

  19. Spin-orbital effects in metal-dichalcogenide semiconducting monolayers

    OpenAIRE

    Reyes-Retana, J. A.; F. Cervantes-Sodi

    2016-01-01

    Metal-dioxide & metal-dichalcogenide monolayers are studied by means of Density Functional Theory. For an accurate reproduction of the electronic structure of transition metal systems, the spin orbit interaction is considered by using fully relativistic pseudopotentials (FRUP). The electronic and spin properties of MX2 (M = Sc, Cr, Mn, Ni, Mo & W and X = O, S, Se & Te) were obtained with FRUP, compared with the scalar relativistic pseudopotentials (SRUP) and with the available experimental re...

  20. Performance Analysis of Strained Monolayer MoS$_{2}$ MOSFET

    OpenAIRE

    Sengupta, Amretashis; Ghosh, Ram Krishna; Mahapatra, Santanu

    2013-01-01

    We present a computational study on the impact of tensile/compressive uniaxial ($\\varepsilon_{xx}$) and biaxial ($\\varepsilon_{xx}=\\varepsilon_{yy}$) strain on monolayer MoS$_{2}$ NMOS and PMOS FETs. The material properties like band structure, carrier effective mass and the multi-band Hamiltonian of the channel, are evaluated using the Density Functional Theory (DFT). Using these parameters, self-consistent Poisson-Schr\\"{o}dinger solution under the Non-Equilibrium Green's Function (NEGF) fo...

  1. Effect of Impurity Concentration on the Depth Profile of the Electric Field within Monolayer Thin Film

    Directory of Open Access Journals (Sweden)

    N.F. Habubi

    2012-06-01

    Full Text Available The effect of impurity concentration ratios on the depth profile of electric field within monolayer film is presented. SnO2 monolayer thin film material was prepared and doped with Co using spray chemical pyrolysis. The concentration ratios of impurity were 1 %, 3 %, 5 % and 7 %. The analysis utilizes matrix formulas based on Abele's formulas from the calculation of reflectance and transmittance. Present study gives an information to contamination sensitivity in optical coating issue.

  2. Compound-specific hydrogen isotope composition of n-alkanes in combustion residuals of fossil fuels

    Science.gov (United States)

    Bai, Huiling; Peng, Lin; Li, Zhongping; Liu, Xiaofeng; Song, Chongfang; Mu, Ling

    2014-11-01

    The hydrogen isotope compositions (δD) of n-alkanes present in the combustion residuals of fossil fuels (coal, gasoline, and diesel) were measured using GC-IRMS to distinguish between coal soot and vehicle exhaust. The n-alkane δD values of industrial and domestic coal soot ranged from -95.3‰ to -219.6‰ and -128.1‰ to -188.6‰, respectively, exhibiting similar tendencies. The δD values of the C15-C18n-alkanes in both types of coal soot were nearly consistent, and the δD values of the C19-C24n-alkanes exhibited a zigzag profile. The δD values of C16-C22n-alkanes in gasoline exhaust exhibited a saw-tooth distribution, decreased with the carbon number, and were more positive than the δD values of C16-C22n-alkanes in diesel exhaust, which increased with the carbon number. However, the δD values of the C23-C29n-alkanes in gasoline and diesel vehicle exhaust were mostly consistent. The weighted average δD values of the C16-C19n-alkanes in industrial and domestic coal soot were similar to the average δD values in gasoline and diesel vehicle exhausts; however, the average δD values of the C21-C29n-alkanes in vehicle exhausts were richer in D than those in coal soot.

  3. Alkane, terpene and polycyclic aromatic hydrocarbon geochemistry of the Mackenzie River and Mackenzie shelf: Riverine contributions to Beaufort Sea coastal sediment

    Science.gov (United States)

    Yunker, Mark B.; Macdonald, Robie W.; Cretney, Walter J.; Fowler, Brian R.; McLaughlin, Fiona A.

    1993-07-01

    To study the largest source of river sediment to the Arctic Ocean, we have collected suspended particulates from the Mackenzie River in all seasons and sediments from the Mackenzie shelf between the river mouth and the shelf edge. These samples have been analyzed for alkanes, triterpenes and polycyclic aromatic hydrocarbons (PAHs). We found that naturally occurring hydrocarbons predominate in the river and on the shelf. These hydrocarbons include biogenic alkanes and triterpenes with a higher plant/peat origin, diagenetic PAHs from peat and plant detritus, petrogenic alkanes, triterpenes and PAHs from oil seeps and/or bitumens and combustion PAHs that are likely relict in peat deposits. Because these components vary independently, the season is found to strongly influence the concentration and composition of hydrocarbons in the Mackenzie River. While essentially the same pattern of alkanes, diagenetic hopanes and alkyl PAHs is observed in all river and most shelf sediment samples, alkane and triterpene concentration variations are strongly linked to the relative amount of higher plant/peat material. Polycyclic aromatic hydrocarbon molecular-mass profiles also appear to be tied primarily to varying proportions of peat, with an additional petrogenic component which is most likely associated with lithic material mobilized by the Mackenzie River at freshet. Consistent with the general lack of alkyl PAHs in peat, the higher PAHs found in the river are probably derived from forest and tundra fires. A few anthropogenic/pyrogenic compounds are manifest only at the shelf edge, probably due to a weakening of the river influence. We take this observation of pyrogenic PAHs and the pronounced source differences between two sediment samples collected at the shelf edge as evidence of a transition from dominance by the Mackenzie River to the geochemistry prevalent in Arctic regions far removed from major rivers.

  4. Interaction of curcumin with lipid monolayers and liposomal bilayers.

    Science.gov (United States)

    Karewicz, Anna; Bielska, Dorota; Gzyl-Malcher, Barbara; Kepczynski, Mariusz; Lach, Radosław; Nowakowska, Maria

    2011-11-01

    Curcumin shows huge potential as an anticancer and anti-inflammatory agent. However, to achieve a satisfactory bioavailability and stability of this compound, its liposomal form is preferable. Our detailed studies on the curcumin interaction with lipid membranes are aimed to obtain better understanding of the mechanism and eventually to improve the efficiency of curcumin delivery to cells. Egg yolk phosphatidylcholine (EYPC) one-component monolayers and bilayers, as well as mixed systems containing additionally dihexadecyl phosphate (DHP) and cholesterol, were studied. Curcumin binding constant to EYPC liposomes was determined based on two different methods: UV/Vis absorption and fluorescence measurements to be 4.26×10(4)M(-1) and 3.79×10(4)M(-1), respectively. The fluorescence quenching experiment revealed that curcumin locates in the hydrophobic region of EYPC liposomal bilayer. It was shown that curcumin impacts the size and stability of the liposomal carriers significantly. Loaded into the EYPC/DPH/cholesterol liposomal bilayer curcumin stabilizes the system proportionally to its content, while the EYPC/DPH system is destabilized upon drug loading. The three-component lipid composition of the liposome seems to be the most promising system for curcumin delivery. An interaction of free and liposomal curcumin with EYPC and mixed monolayers was also studied using Langmuir balance measurements. Monolayer systems were treated as a simple model of cell membrane. Condensing effect of curcumin on EYPC and EYPC/DHP monolayers and loosening influence on EYPC/DHP/chol ones were observed. It was also demonstrated that curcumin-loaded EYPC liposomes are more stable upon interaction with the model lipid membrane than the unloaded ones.

  5. Structures and thermal properties of the N2 monolayer on Pb(1 1 1)

    International Nuclear Information System (INIS)

    The physisorption of N2 molecules has long been a model system of molecular adsorption. We present a low-energy electron diffraction (LEED) study of the adsorption structures and thermodynamics of monolayer N2 on Pb(1 1 1). The results indicate that the monolayer structure has a triangular incommensurate center-of-mass lattice, and that the N2-substrate interaction is weaker than that observed on other metal surfaces. The N2 monolayer undergoes a phase transition between an orientationally ordered phase (low-temperature) and an orientationally disordered phase at a temperature of 20 K. Potential energy and quasiharmonic calculations indicate that the weak N2-Pb(1 1 1) interaction is the main contributing factor for the difference in orientational order of incommensurate N2 monolayers on Pb(1 1 1) and other similar metal surfaces. (paper)

  6. Platinum monolayer electrocatalysts for oxygen reduction: effect of substrates, and long-term stability

    Directory of Open Access Journals (Sweden)

    J. ZHANG

    2005-03-01

    Full Text Available We describe a novel concept for a Ptmonolayer electrocatalyst and present the results of our electrochemical, X-ray absorption spectroscopy, and scanning tunneling microscopy studies. The electrocatalysts were prepared by a new method for depositing Pt monolayers involving the galvanic displacement by Pt of an underpotentially deposited Cu monolayer on substrates of Au (111, Ir(111, Pd(111, Rh(111 and Ru(0001 single crylstals, and Pd nanoparticles. The kinetics of O2 reduction showed significant enhancement with Pt monolayers on Pd(111 and Pd nanoparticle surfaces in comparisonwith the reaction on Pt(111 and Pt nanoparticles, respectively. This increase in catalytic activity is attributed partly to the decreased formation of PtOH, as shown by in situ X-ray absorption spectroscopy. The results illustrate that placing a Pt monolayer on a suitable substrate of metal nanoparticles is an attractive way of designing better O2 reduction electrocatalysts with very low Pt contents.

  7. Inter-domain dipolar repulsion in lipid monolayers with phase coexistence

    CERN Document Server

    Fiori, Elena Rufeil; Banchio, Adolfo J

    2015-01-01

    A great variety of biologically relevant monolayers present phase coexistence characterized by domains formed by lipids in a long-range ordered phase state dispersed in a continuous, disordered phase. Because of the difference in surface densities the domains possess an excess dipolar density with respect to the surrounding liquid phase. In this work we propose an alternative method to measure the dipolar repulsion for neutral lipid monolayers. The procedure is based on the comparison of the radial distribution function, g(r), from experiments and Brownian dynamic (BD) simulations. The domains were modeled as disks with surface dipolar density, whose strength was varied to best describe the experimentally determined monolayer structure. For comparison, the point dipole approximation was also studied. As an example, we applied the method for mixed monolayers with different proportions of distearoylphosphatidylcholine (DSPC) and dimyristoylphosphatidylcholine (DMPC) and obtained the excess dipolar density, whic...

  8. Kinetic and Mechanistic Assessment of Alkanol/Alkanal Decarbonylation and Deoxygenation Pathways on Metal Catalysts.

    Science.gov (United States)

    Gürbüz, Elif I; Hibbitts, David D; Iglesia, Enrique

    2015-09-23

    This study combines theory and experiment to determine the kinetically relevant steps and site requirements for deoxygenation of alkanols and alkanals. These reactants deoxygenate predominantly via decarbonylation (C-C cleavage) instead of C-O hydrogenolysis on Ir, Pt, and Ru, leading to strong inhibition effects by chemisorbed CO (CO*). C-C cleavage occurs via unsaturated species formed in sequential quasi-equilibrated dehydrogenation steps, which replace C-H with C-metal bonds, resulting in strong inhibition by H2, also observed in alkane hydrogenolysis. C-C cleavage occurs in oxygenates only at locations vicinal to the C═O group in RCCO* intermediates, because such adjacency weakens C-C bonds, which also leads to much lower activation enthalpies for oxygenates than hydrocarbons. C-O hydrogenolysis rates are independent of H2 pressure and limited by H*-assisted C-O cleavage in RCHOH* intermediates on surfaces with significant coverages of CO* formed in decarbonylation events. The ratio of C-O hydrogenolysis to decarbonylation rates increased almost 100-fold as the Ir cluster size increased from 0.7 to 7 nm; these trends reflect C-O hydrogenolysis reactions favored on terrace sites, while C-C hydrogenolysis prefers sites with lower coordination, because of the relative size of their transition states and the crowded nature of CO*-covered surfaces. C-O hydrogenolysis becomes the preferred deoxygenation route on Cu-based catalysts, thus avoiding CO inhibition effects. The relative rates of C-O and C-C cleavage on these metals depend on their relative ability to bind C atoms, because C-C cleavage transitions states require an additional M-C attachment.

  9. Raman analysis of first monolayers of PTCDA on Ag(111)

    International Nuclear Information System (INIS)

    We present a Raman spectroscopic analysis of the bonding properties of organic molecules on Ag(111) surfaces as a model system for organic semiconductor/metal contacts. The planar molecule 3,4,9,10-perylene-tetracarboxylicacid-dianhydride (PTCDA) is used in the present study due to its high electronic mobility and thermal stability. Vibrational signatures of the first monolayer in direct contact with the metal, especially the modes at 1310 and 1575 cm-1, are found to be shifted to lower frequencies. First principles calculations result in corresponding mode patterns, which are essentially located in the centre of the molecule thus indicating the area, where major metal interaction takes place. Furthermore, upon annealing at 450 K the vibrational frequencies of the second monolayer are modified with respect to bulk PTCDA, which reflect particular changes of the bonding situation of this layer. For subsequent layers bulk-like behaviour is observed

  10. Electronic structure of graphene oxide and reduced graphene oxide monolayers

    Energy Technology Data Exchange (ETDEWEB)

    Sutar, D. S. [Department of Physics, Indian Institute of Technology Bombay, Mumbai 400076 (India); Central Surface Analytical Facility, Indian Institute of Technology Bombay, Mumbai 400076 (India); Singh, Gulbagh; Divakar Botcha, V. [Department of Physics, Indian Institute of Technology Bombay, Mumbai 400076 (India)

    2012-09-03

    Graphene oxide (GO) monolayers obtained by Langmuir Blodgett route and suitably treated to obtain reduced graphene oxide (RGO) monolayers were studied by photoelectron spectroscopy. Upon reduction of GO to form RGO C1s x-ray photoelectron spectra showed increase in graphitic carbon content, while ultraviolet photoelectron spectra showed increase in intensity corresponding to C2p-{pi} electrons ({approx}3.5 eV). X-ray excited Auger transitions C(KVV) and plasmon energy loss of C1s photoelectrons have been analyzed to elucidate the valence band structure. The effective number of ({pi}+{sigma}) electrons as obtained from energy loss spectra was found to increase by {approx}28% on reduction of GO.

  11. Surface investigation of chitosan film with fatty acid monolayers

    Directory of Open Access Journals (Sweden)

    Esam A. El-hefian

    2009-05-01

    Full Text Available The surface pressure- molecular area (-A isotherm curves of two fatty acids of different chain lengths, i.e. stearic (C18 and arachidic (C20 acids, were obtained by using Langmuir-Blodgett (LB technique. Results showed clear isotherm plots with limiting mean molecular area around 21 Å2 for both acids. However, the monolayer was found to collapse at higher than 33 mN m-1 and 21 mN m-1 for stearic acid and arachidic acid respectively. The effect of Langmuir-Blodgett monolayers of the acids was investigated by atomic force microscopy (AFM. Chitosan film, before and after dipping in water, was also studied by means of AFM so that it could be used for comparison. It was found that the surface of chitosan was more homogeneous and smoother after dipping in water. In addition, more homogeneous surfaces were achieved after transferring a layer of the fatty acid onto the substrate.

  12. Microscopic dynamics of nanoparticle monolayers at air-water interface.

    Science.gov (United States)

    Bhattacharya, R; Basu, J K

    2013-04-15

    We present results of surface mechanical and particle tracking measurements of nanoparticles trapped at the air-water interface as a function of their areal density. We monitor both the surface pressure (Π) and isothermal compression modulus (ϵ) as well as the dynamics of nanoparticle clusters, using fluorescence confocal microscopy while they are compressed to very high density near the two dimensional close packing density Φ∼0.82. We observe non-monotonic variation in both ϵ and the dynamic heterogeneity, characterized by the dynamical susceptibility χ4 with Φ, in such high density monolayers. We provide insight into the underlying nature of such transitions in close packed high density nanoparticle monolayers in terms of the morphology and flexibility of these soft colloidal particles. We discuss the significance our results in the context of related studies on two dimensional granular or colloidal systems. PMID:23411354

  13. Large Range Manipulation of Exciton Species in Monolayer WS2

    CERN Document Server

    Wei, Ke; Yang, Hang; Cheng, Xiangai; Jiang, Tian

    2016-01-01

    Unconventional emissions from exciton and trion in monolayer WS2 are studied by photoexcitation. Excited by 532nm laser beam, the carrier species in the monolayer WS2 are affected by the excess electrons escaping from photoionization of donor impurity, the concentration of which varies with different locations of the sample. Simply increasing the excitation power at room temperature, the excess electron and thus the intensity ratio of excited trion and exciton can be continuously tuned over a large range from 0.1 to 7.7. Furthermore, this intensity ratio can also be manipulated by varying temperature. However, in this way the resonance energy of the exciton and trion show red-shifts with increasing temperature due to electron-phonon coupling. The binding energy of the trion is determined to be ~23meV and independent to temperature, indicating strong Coulomb interaction of carriers in such 2D materials.

  14. Neutral amino acid transport across brain microvessel endothelial cell monolayers

    International Nuclear Information System (INIS)

    Brain microvessel endothelial cells (BMEC) which form the blood-brain barrier (BBB) possess an amino acid carrier specific for large neutral amino acids (LNAA). The carrier is important for facilitating the delivery of nutrient LNAA's and centrally acting drugs that are LNAA's, to the brain. Bovine BMEC's were isolated and grown up to complete monolayers on regenerated cellulose-membranes in primary culture. To study the transendothelial transport of leucine, the monolayers were placed in a side-by-side diffusion cell, and transport across the monolayers followed with [3H]-leucine. The transendothelial transport of leucine in this in vitro model was determined to be bidirectional, and time-, temperature-, and concentration-dependent. The transport of leucine was saturable and the apparent K/sub m/ and V/sub max/, 0.18 mM and 6.3 nmol/mg/min, respectively. Other LNAA's, including the centrally acting drugs, α-methyldopa, L-DOPA, α-methyl-tyrosine, and baclofen, inhibited leucine transport. The leucine carrier was also found to be stereospecific and not sensitive to inhibitors of active transport. These results are consistent with previous in vitro and in vivo studies. Primary cultures of BMEC's appear to be a potentially important tool for investigating at the cellular level, the transport mechanisms of the BBB

  15. Neutral amino acid transport across brain microvessel endothelial cell monolayers

    Energy Technology Data Exchange (ETDEWEB)

    Audus, K.L.; Borchardt, R.T.

    1986-03-01

    Brain microvessel endothelial cells (BMEC) which form the blood-brain barrier (BBB) possess an amino acid carrier specific for large neutral amino acids (LNAA). The carrier is important for facilitating the delivery of nutrient LNAA's and centrally acting drugs that are LNAA's, to the brain. Bovine BMEC's were isolated and grown up to complete monolayers on regenerated cellulose-membranes in primary culture. To study the transendothelial transport of leucine, the monolayers were placed in a side-by-side diffusion cell, and transport across the monolayers followed with (/sup 3/H)-leucine. The transendothelial transport of leucine in this in vitro model was determined to be bidirectional, and time-, temperature-, and concentration-dependent. The transport of leucine was saturable and the apparent K/sub m/ and V/sub max/, 0.18 mM and 6.3 nmol/mg/min, respectively. Other LNAA's, including the centrally acting drugs, ..cap alpha..-methyldopa, L-DOPA, ..cap alpha..-methyl-tyrosine, and baclofen, inhibited leucine transport. The leucine carrier was also found to be stereospecific and not sensitive to inhibitors of active transport. These results are consistent with previous in vitro and in vivo studies. Primary cultures of BMEC's appear to be a potentially important tool for investigating at the cellular level, the transport mechanisms of the BBB.

  16. Wrinkle to fold transitions: Stress relaxation in lipid monolayers and other elastic thin films

    Science.gov (United States)

    Lee, Ka Yee C.

    2009-03-01

    Surfactants at air/water interfaces are often subjected to mechanical stresses as the interfaces they occupy are reduced in area. The most well characterized forms of stress relaxation in these systems are first order phase transitions. However, once chemical phase transitions have been exhausted, the monolayer undergoes global mechanical relaxations termed collapse. We have previously demonstrated that for lung surfactants, a mixture of lipids and proteins that coats the alveoli to reduce the work of breathing, collapse manifests itself as protrusions of folds into the subphase. These folds remain attached to the monolayer and reversibly reincorporated upon expansion. By studying different types of monolayers, we have shown that this folding transition in monolayers is not limited to lung surfactant films, but rather represents a much more general type of stress relaxation mechanism. Our study indicates that collapse modes are found most closely linked to in-plane rigidity. We characterize the rigidity of the monolayer by analyzing in-plane morphology on numerous length scales. More rigid monolayers collapse out-of-plane via a hard elastic mode similar to an elastic membrane, with the folded state being the final collapse state, while softer monolayers relax in-plane by shearing. For the hard elastic mode of collapse, we have further demonstrated experimentally and theoretically that the folded state is preceded by a wrinkled state, and similar wrinkle to fold transitions has been observed in elastic thin films ranging from 2 nm to 10 μm in thickness of completely different chemical nature (lung surfactant lipid monolayers, gold nanoparticle trilayers, and polyester sheets).

  17. CO catalytic oxidation on iron-embedded monolayer MoS{sub 2}

    Energy Technology Data Exchange (ETDEWEB)

    Ma, Dongwei, E-mail: dwmachina@126.com [School of Physics, Anyang Normal University, Anyang, Henan 455000 (China); Tang, Yanan [Department of Physics and Electronic Science, Zhengzhou Normal University, Zhengzhou, Henan 450044 (China); Yang, Gui; Zeng, Jun [School of Physics, Anyang Normal University, Anyang, Henan 455000 (China); He, Chaozheng [Physics and Electronic Engineering College, Nanyang Normal University, Nanyang 473061 (China); Lu, Zhansheng [College of Physics and Electronic Engineering, Henan Normal University, Xinxiang, Henan 453007 (China)

    2015-02-15

    Highlights: • CO catalytic oxidation on the Fe-embedded monolayer MoS{sub 2} has been studied. • Fe atom can be strongly constrained at the S vacancy of monolayer MoS{sub 2}. • Fe-embedded monolayer MoS{sub 2} shows high catalytic activity toward CO oxidation. - Abstract: Based on first-principles calculations, the CO catalytic oxidation on the Fe-embedded monolayer MoS{sub 2} (Fe-MoS{sub 2}) was investigated. It is found that Fe atom can be strongly constrained at the S vacancy of monolayer MoS{sub 2} with a high diffusion barrier. The CO oxidation reaction proceeds via a two-step mechanism with the highest energy barrier of 0.51 eV, which is started by the Langmuir–Hinshelwood reaction and ended by the Eley–Rideal reaction. The high catalytic activity of the Fe-MoS{sub 2} system may be attributed to the charge transfer and the orbital hybridization between the adsorbates and the Fe atom. This study proposes that embedding transition-metals is a promising way for making the basal plane of monolayer MoS{sub 2} catalytically active.

  18. Oriented cell division affects the global stress and cell packing geometry of a monolayer under stretch.

    Science.gov (United States)

    Xu, Guang-Kui; Liu, Yang; Zheng, Zhaoliang

    2016-02-01

    Cell division plays a vital role in tissue morphogenesis and homeostasis, and the division plane is crucial for cell fate. For isolated cells, extensive studies show that the orientation of divisions is sensitive to cell shape and the direction of extrinsic mechanical forces. However, it is poorly understood that how the cell divides within a cell monolayer and how the local stress change, due to the division, affects the global stress of epithelial monolayers. Here, we use the vertex dynamics models to investigate the effects of division orientation on the configurations and mechanics of a cell monolayer under stretch. We examine three scenarios of the divisions: dividing along the stretch axis, dividing along the geometric long axis of cells, and dividing at a random angle. It is found that the division along the long cell axis can induce the minimal energy difference, and the global stress of the monolayer after stretch releases more rapidly in this case. Moreover, the long-axis division can result in more random cell orientations and more isotropic cell shapes within the monolayer, comparing with other two cases. This study helps understand the division orientation of cells within a monolayer under mechanical stimuli, and may shed light on linking individual cell's behaviors to the global mechanics and patterns of tissues.

  19. Aging of Transition Metal Dichalcogenide Monolayers.

    Science.gov (United States)

    Gao, Jian; Li, Baichang; Tan, Jiawei; Chow, Phil; Lu, Toh-Ming; Koratkar, Nikhil

    2016-02-23

    Two-dimensional sheets of transition metal dichalcogenides are an emerging class of atomically thin semiconductors that are considered to be "air-stable", similar to graphene. Here we report that, contrary to current understanding, chemical vapor deposited transition metal dichalcogenide monolayers exhibit poor long-term stability in air. After room-temperature exposure to the environment for several months, monolayers of molybdenum disulfide and tungsten disulfide undergo dramatic aging effects including extensive cracking, changes in morphology, and severe quenching of the direct gap photoluminescence. X-ray photoelectron and Auger electron spectroscopy reveal that this effect is related to gradual oxidation along the grain boundaries and the adsorption of organic contaminants. These results highlight important challenges associated with the utilization of transition metal dichalcogenide monolayers in electronic and optoelectronic devices. We also demonstrate a potential solution to this problem, featuring encapsulation of the monolayer sheet by a 10-20 nm thick optically transparent polymer (parylene C). This strategy is shown to successfully prevent the degradation of the monolayer material under accelerated aging (i.e., high-temperature, oxygen-rich) conditions. PMID:26808328

  20. The electronic structure and elastic property of monolayer and bilayer transition metal dichalcogenides MX$_2$ (M=Mo,W;X=O,S,Se,Te): A comparative first-principles study

    OpenAIRE

    Zeng, Fan; Zhang, Wei-Bing; Tang, Bi-Yu

    2015-01-01

    First-principle calculations with different exchange-correlation functionals, including LDA, PBE and vdW-DF functional in form of optB88-vdW, have been performed to investigate the electronic and elastic properties of two dimensional transition metal dichalcogenides(TMDCs) with the formula of MX$_2$(M=Mo,W; X=O,S,Se,Te) in both monolayer and bilayer structures. The calculated band structures show a direct band gap for monolayer TMDCs at the K point except for MoO$_2$ and WO$_2$. When the mono...

  1. 单层二硫化钼多相性质及相变的第一性原理研究∗%First-principles study on multiphase prop erty and phase transition of monolayer MoS2

    Institute of Scientific and Technical Information of China (English)

    张理勇; 方粮; 彭向阳

    2016-01-01

    rises to 104 cm2·V−1·s−1. The great carrier mobility of ZT-MoS2 covers the shortage of 2H-MoS2 and expands the applications of monolayer MoS2. After obtaining the intrinsic properties of three phases, we investigate the phase transition of monolayer MoS2. Adsorption energy becomes more accurate with van der Waals corrections. Through comparing the adsorption energy, we conclude that the stabilities of Li absorbed on the surfaces of three phases are in the following order: 1T-MoS2>ZT-MoS2>2H-MoS2, which is opposite to the stability order of the three phases. It means that 1T-MoS2 absorbs Li more easily than 2H-MoS2. Finally we compute the energy pathways of the phase transition from 2H-MoS2 to 1T-MoS2. Introducing an electron makes the energy barrier of 2H-1T transition change from 1.85 eV to 1.49 eV. Increasing electron concentration reduces the difficulty in producing phase transition. Li intercalation plays the same role as an electron and the energy barrier drops to 1.24 eV. In conclusion, the MoS2 electron concentration change is the key reason for phase transition. The study results may provide guidance for the preparation and characterization of monolayer MoS2.

  2. Islet amyloid polypeptide inserts into phospholipid monolayers as monomer.

    Science.gov (United States)

    Engel, Maarten F M; Yigittop, HaciAli; Elgersma, Ronald C; Rijkers, Dirk T S; Liskamp, Rob M J; de Kruijff, Ben; Höppener, Jo W M; Antoinette Killian, J

    2006-02-24

    Amyloid deposits in the pancreatic islets of Langerhans are thought to be a main factor responsible for death of the insulin-producing islet beta-cells in type 2 diabetes. It is hypothesized that beta-cell death is related to interaction of the 37 amino acid residue human islet amyloid polypeptide (hIAPP), the major constituent of islet amyloid, with cellular membranes. However, the mechanism of hIAPP-membrane interactions is largely unknown. Here, we study the nature and the molecular details of the initial step of hIAPP-membrane interactions by using the monolayer technique. It is shown that both freshly dissolved hIAPP and the non-amyloidogenic mouse IAPP (mIAPP) have a pronounced ability to insert into phospholipid monolayers, even at lipid packing conditions that exceed the conditions that occur in biological membranes. In contrast, the fibrillar form of hIAPP has lost the ability to insert. These results, combined with the observations that both the insertion kinetics and the dependence of insertion on the initial surface pressure are similar for freshly dissolved hIAPP and mIAPP, indicate that hIAPP inserts into phospholipid monolayers most likely as a monomer. In addition, our results suggest that the N-terminal part of hIAPP, which is nearly identical with that of mIAPP, is largely responsible for insertion. This is supported by experiments with hIAPP fragments, which show that a peptide consisting of the 19 N-terminal residues of hIAPP efficiently inserts into phospholipid monolayers, whereas an amyloidogenic decapeptide, consisting of residues 20-29 of hIAPP, inserts much less efficiently. The results obtained here suggest that hIAPP monomers might insert with high efficiency in biological membranes in vivo. This process could play an important role as a first step in hIAPP-induced membrane damage in type 2 diabetes. PMID:16403520

  3. Binary functionalization of H:Si(111) surfaces by alkyl monolayers with different linker atoms enhances monolayer stability and packing.

    Science.gov (United States)

    Arefi, Hadi H; Nolan, Michael; Fagas, Giorgos

    2016-05-14

    Alkyl monolayer modified Si forms a class of inorganic-organic hybrid materials with applications across many technologies such as thin-films, fuel/solar-cells and biosensors. Previous studies have shown that the linker atom, through which the monolayer binds to the Si substrate, and any tail group in the alkyl chain, can tune the monolayer stability and electronic properties. In this paper we study the H:Si(111) surface functionalized with binary SAMs: these are composed of alkyl chains that are linked to the surface by two different linker groups. Aiming to enhance SAM stability and increase coverage over singly functionalized Si, we examine with density functional theory simulations that incorporate vdW interactions, a range of linker groups which we denote as -X-(alkyl) with X = CH2, O(H), S(H) or NH(2) (alkyl = C6 and C12 chains). We show how the stability of the SAM can be enhanced by adsorbing alkyl chains with two different linkers, e.g. Si-[C, NH]-alkyl, through which the adsorption energy is increased compared to functionalization with the individual -X-alkyl chains. Our results show that it is possible to improve stability and optimum coverage of alkyl functionalized SAMs linked through a direct Si-C bond by incorporating alkyl chains linked to Si through a different linker group, while preserving the interface electronic structure that determines key electronic properties. This is important since any enhancement in stability and coverage to give more densely packed monolayers will result in fewer defects. We also show that the work function can be tuned within the interval of 3.65-4.94 eV (4.55 eV for bare H:Si(111)).

  4. Formation and stability of point defects in monolayer rhenium disulfide

    Science.gov (United States)

    Horzum, S.; ćakır, D.; Suh, J.; Tongay, S.; Huang, Y.-S.; Ho, C.-H.; Wu, J.; Sahin, H.; Peeters, F. M.

    2014-04-01

    Recently, rhenium disulfide (ReS2) monolayers were experimentally extracted by conventional mechanical exfoliation technique from as-grown ReS2 crystals. Unlike the well-known members of transition metal dichalcogenides (TMDs), ReS2 crystallizes in a stable distorted-1T structure and lacks an indirect to direct gap crossover. Here we present an experimental and theoretical study of the formation, energetics, and stability of the most prominent lattice defects in monolayer ReS2. Experimentally, irradiation with 3-MeV He+2 ions was used to break the strong covalent bonds in ReS2 flakes. Photoluminescence measurements showed that the luminescence from monolayers is mostly unchanged after highly energetic α particle irradiation. In order to understand the energetics of possible vacancies in ReS2 we performed systematic first-principles calculations. Our calculations revealed that the formation of a single sulfur vacancy has the lowest formation energy in both Re and S rich conditions and a random distribution of such defects are energetically more preferable. Sulfur point defects do not result in any spin polarization whereas the creation of Re-containing point defects induce magnetization with a net magnetic moment of 1-3μB. Experimentally observed easy formation of sulfur vacancies is in good agreement with first-principles calculations.

  5. Top-grid monolayer graphene/Si Schottkey solar cell

    International Nuclear Information System (INIS)

    Monolayer graphene/Si Schottkey solar cell was fabricated using a top-grid structure. In comparison with the prevailing “top-window” structure, the newly-designed device structure has simplified the fabrication procedures to avoid ultraviolet (UV) photolithography and SiO2-eching. We systematically investigated the effect of chemical doping as well as device area on the device performance. It was found that a power conversion efficiency (PCE) of 5.9% can be achieved by engineering the work function of graphene through chemical doping. Our study indicates that top grid structure is suitable to make low-cost, large area and high efficiency graphene/Si Schottkey solar cell. - Graphical abstract: The engineering of the work function of graphene through chemical doping is an effective approach to improve the performance of monolayer graphene/Si Schottky solar cell. - Highlights: • Monolayer graphene/Si Schottkey solar cell was fabricated. • Chemical doping can effectively tune the work function of graphene film. • Chemical doping has significant effect on the device performance. • The top-grid device structure with graphene is promising with low-cost and high efficiency

  6. Immobilization of Colloidal Monolayers at Fluid–Fluid Interfaces

    Directory of Open Access Journals (Sweden)

    Peter T. Bähler

    2016-07-01

    Full Text Available Monolayers of colloidal particles trapped at an interface between two immiscible fluids play a pivotal role in many applications and act as essential models in fundamental studies. One of the main advantages of these systems is that non-close packed monolayers with tunable inter-particle spacing can be formed, as required, for instance, in surface patterning and sensing applications. At the same time, the immobilization of particles locked into desired structures to be transferred to solid substrates remains challenging. Here, we describe three different strategies to immobilize monolayers of polystyrene microparticles at water–decane interfaces. The first route is based on the leaking of polystyrene oligomers from the particles themselves, which leads to the formation of a rigid interfacial film. The other two rely on in situ interfacial polymerization routes that embed the particles into a polymer membrane. By tracking the motion of the colloids at the interface, we can follow in real-time the formation of the polymer membranes and we interestingly find that the onset of the polymerization reaction is accompanied by an increase in particle mobility determined by Marangoni flows at the interface. These results pave the way for future developments in the realization of thin tailored composite polymer-particle membranes.

  7. Specific Ion Effects in Cholesterol Monolayers

    Directory of Open Access Journals (Sweden)

    Teresa Del Castillo-Santaella

    2016-05-01

    Full Text Available The interaction of ions with interfaces and, in particular, the high specificity of these interactions to the particular ions considered, are central questions in the field of surface forces. Here we study the effect of different salts (NaI, NaCl, CaCl2 and MgCl2 on monolayers made of cholesterol molecules, both experimentally (surface area vs. lateral pressure isotherms measured by a Langmuir Film Balance and theoretically (molecular dynamics (MD all-atomic simulations. We found that surface isotherms depend, both quantitatively and qualitatively, on the nature of the ions by altering the shape and features of the isotherm. In line with the experiments, MD simulations show clear evidences of specific ionic effects and also provide molecular level details on ion specific interactions with cholesterol. More importantly, MD simulations show that the interaction of a particular ion with the surface depends strongly on its counterion, a feature ignored so far in most theories of specific ionic effects in surface forces.

  8. Recent Results on Fast Flow Gas-Phase Partial Oxidation of Lower Alkanes

    Institute of Scientific and Technical Information of China (English)

    Vladimir S. Arutyunov

    2004-01-01

    Recent experimental results and kinetic modeling of fast flow gas-phase oxidation of methane and other lower alkanes to methanol and other oxygenates are discussed, alongside with prospects and possible areas for applications of the processes.

  9. Oxidation of alkanes with m-chloroperbenzoic acid catalyzed by iron(III) chloride and a polydentate amine

    OpenAIRE

    Shul’pin, Georgiy B.; Stoeckli-Evans, Helen; Mandelli, Dalmo; Kozlov, Yuriy N.; Tesouro Vallina, Ana; Woitiski, Camile B.; Jimenez, Ricardo S.; Carvalho, Wagner A.

    2009-01-01

    Tetradentate amine N,N′-bis(2-pyridylmethylene)-1,4-diaminodiphenyl ether (compound 1) dramatically accelerates the oxidation of alkanes with MCPBA in acetonitrile catalyzed by FeCl3, whereas N,N′-bis(2-pyrrolidinmethylene)-1,4-diaminodiphenyl ether (2) does not affect the reaction. The selectivity of the reaction in the presence of 1 is noticeably higher than that in its absence. On the basis of the kinetic study and selectivity parameters a mechanism has been proposed which includes the for...

  10. Giant piezoelectricity of monolayer group IV monochalcogenides

    Science.gov (United States)

    Fei, Ruixiang; Li, Wenbin; Li, Ju; Yang, Li

    We predict enormous, anisotropic piezoelectric effects in intrinsic monolayer group IV monochalcogenides (MX, M =Sn or Ge, X =Se or S), including SnSe, SnS, GeSe, and GeS. Using first-principle simulations based on the modern theory of polarization, we find that their piezoelectric coefficients are about one to two orders of magnitude larger than those of other 2D materials, such as MoS2 and GaSe, and bulk quartz and AlN which are widely used in industry. This enhancement is a result of the unique ``puckered'' C2v symmetry and electronic structure of monolayer group IV monochalcogenides. Given the achieved experimental advances in the fabrication of monolayers, their flexible character, and ability to withstand enormous strain, these 2D structures with giant piezoelectric effects may be promising for a broad range of applications such as nano-sized sensors, piezotronics, and energy harvesting in portable electronic devices.

  11. Electromagnetic interference shielding effectiveness of monolayer graphene.

    Science.gov (United States)

    Hong, Seul Ki; Kim, Ki Yeong; Kim, Taek Yong; Kim, Jong Hoon; Park, Seong Wook; Kim, Joung Ho; Cho, Byung Jin

    2012-11-16

    We report the first experimental results on the electromagnetic interference (EMI) shielding effectiveness (SE) of monolayer graphene. The monolayer CVD graphene has an average SE value of 2.27 dB, corresponding to ~40% shielding of incident waves. CVD graphene shows more than seven times (in terms of dB) greater SE than gold film. The dominant mechanism is absorption rather than reflection, and the portion of absorption decreases with an increase in the number of graphene layers. Our modeling work shows that plane-wave theory for metal shielding is also applicable to graphene. The model predicts that ideal monolayer graphene can shield as much as 97.8% of EMI. This suggests the feasibility of manufacturing an ultrathin, transparent, and flexible EMI shield by single or few-layer graphene. PMID:23085718

  12. Characterization and Two-Dimensional Crystallization of Membrane Component AlkB of the Medium-Chain Alkane Hydroxylase System from Pseudomonas putida GPo1

    OpenAIRE

    Alonso, Hernan; Roujeinikova, Anna

    2012-01-01

    The alkane hydroxylase system of Pseudomonas putida GPo1 allows it to use alkanes as the sole source of carbon and energy. Bacterial alkane hydroxylases have tremendous potential as biocatalysts for the stereo- and regioselective transformation of a wide range of chemically inert unreactive alkanes into valuable reactive chemical precursors. We have produced and characterized the first 2-dimensional crystals of the integral membrane component of the P. putida alkane hydroxylase system, the no...

  13. Monolayers of poly-L-lysine on mica--Electrokinetic characteristics.

    Science.gov (United States)

    Morga, Maria; Adamczyk, Zbigniew; Gödrich, Sebastian; Oćwieja, Magdalena; Papastavrou, Georg

    2015-10-15

    Physicochemical properties of poly-l-lysine and its monolayers on mica were thoroughly investigated by dynamic light scattering, electrokinetic methods and atomic force microscopy. The hydrodynamic diameter of PLL was equal to 25.5 nm within a wide range of pH and ionic strength. The electrophoretic measurements revealed that the molecules are positively charged for pHmica under diffusion-controlled conditions by varying PLL bulk concentration and adsorption time. The electrokinetic characteristics of the monolayers were acquired in situ via streaming potential measurements. These studies allowed to uniquely determine the zeta potential of the monolayers as a function of pH and ionic strength. In this way the isoelectric point of the monolayers can be determined in a more convenient way compared to bulk measurements disturbed by the PLL molecule interactions. The stability of the monolayers under flow conditions was quantitatively evaluated via streaming potential measurements. The adsorption constant and the binding energy depth of PLL molecules were determined for different ionic strengths. These parameters indicate that the PLL monolayers remain stable over prolonged times.

  14. The stability of aluminium oxide monolayer and its interface with two-dimensional materials.

    Science.gov (United States)

    Song, Ting Ting; Yang, Ming; Chai, Jian Wei; Callsen, Martin; Zhou, Jun; Yang, Tong; Zhang, Zheng; Pan, Ji Sheng; Chi, Dong Zhi; Feng, Yuan Ping; Wang, Shi Jie

    2016-01-01

    The miniaturization of future electronic devices requires the knowledge of interfacial properties between two-dimensional channel materials and high-κ dielectrics in the limit of one atomic layer thickness. In this report, by combining particle-swarm optimization method with first-principles calculations, we present a detailed study of structural, electronic, mechanical, and dielectric properties of Al2O3 monolayer. We predict that planar Al2O3 monolayer is globally stable with a direct band gap of 5.99 eV and thermal stability up to 1100 K. The stability of this high-κ oxide monolayer can be enhanced by substrates such as graphene, for which the interfacial interaction is found to be weak. The band offsets between the Al2O3 monolayer and graphene are large enough for electronic applications. Our results not only predict a stable high-κ oxide monolayer, but also improve the understanding of interfacial properties between a high-κ dielectric monolayer and two-dimensional material. PMID:27381580

  15. The stability of aluminium oxide monolayer and its interface with two-dimensional materials

    Science.gov (United States)

    Song, Ting Ting; Yang, Ming; Chai, Jian Wei; Callsen, Martin; Zhou, Jun; Yang, Tong; Zhang, Zheng; Pan, Ji Sheng; Chi, Dong Zhi; Feng, Yuan Ping; Wang, Shi Jie

    2016-07-01

    The miniaturization of future electronic devices requires the knowledge of interfacial properties between two-dimensional channel materials and high-κ dielectrics in the limit of one atomic layer thickness. In this report, by combining particle-swarm optimization method with first-principles calculations, we present a detailed study of structural, electronic, mechanical, and dielectric properties of Al2O3 monolayer. We predict that planar Al2O3 monolayer is globally stable with a direct band gap of 5.99 eV and thermal stability up to 1100 K. The stability of this high-κ oxide monolayer can be enhanced by substrates such as graphene, for which the interfacial interaction is found to be weak. The band offsets between the Al2O3 monolayer and graphene are large enough for electronic applications. Our results not only predict a stable high-κ oxide monolayer, but also improve the understanding of interfacial properties between a high-κ dielectric monolayer and two-dimensional material.

  16. Multifunctional Self-Assembled Monolayers for Organic Field-Effect Transistors

    Science.gov (United States)

    Cernetic, Nathan

    Organic field effect transistors (OFETs) have the potential to reach commercialization for a wide variety of applications such as active matrix display circuitry, chemical and biological sensing, radio-frequency identification devices and flexible electronics. In order to be commercially competitive with already at-market amorphous silicon devices, OFETs need to approach similar performance levels. Significant progress has been made in developing high performance organic semiconductors and dielectric materials. Additionally, a common route to improve the performance metric of OFETs is via interface modification at the critical dielectric/semiconductor and electrode/semiconductor interface which often play a significant role in charge transport properties. These metal oxide interfaces are typically modified with rationally designed multifunctional self-assembled monolayers. As means toward improving the performance metrics of OFETs, rationally designed multifunctional self-assembled monolayers are used to explore the relationship between surface energy, SAM order, and SAM dipole on OFET performance. The studies presented within are (1) development of a multifunctional SAM capable of simultaneously modifying dielectric and metal surface while maintaining compatibility with solution processed techniques (2) exploration of the relationship between SAM dipole and anchor group on graphene transistors, and (3) development of self-assembled monolayer field-effect transistor in which the traditional thick organic semiconductor is replaced by a rationally designed self-assembled monolayer semiconductor. The findings presented within represent advancement in the understanding of the influence of self-assembled monolayers on OFETs as well as progress towards rationally designed monolayer transistors.

  17. Sub-THz Characterisation of Monolayer Graphene

    Directory of Open Access Journals (Sweden)

    Ehsan Dadrasnia

    2014-01-01

    Full Text Available We explore the optical and electrical characteristics of monolayer graphene by using pulsed optoelectronic terahertz time-domain spectroscopy in the frequency range of 325–500 GHz based on fast direct measurements of phase and amplitude. We also show that these parameters can, however, be measured with higher resolution using a free space continuous wave measurement technique associated with a vector network analyzer that offers a good dynamic range. All the scattering parameters (both magnitude and phase are measured simultaneously. The Nicholson-Ross-Weir method is implemented to extract the monolayer graphene parameters at the aforementioned frequency range.

  18. Primary monolayer culture of adult mouse hepatocytes

    International Nuclear Information System (INIS)

    Primary monolayer cultures of adult mouse hepatocytes isolated by collagenase perfusion of the liver in situ were exposed to 2 hepatotropic viruses, an avian influenza A virus adapted to grow in mouse liver in vivo and a herpes simplex type I virus. Influenza virus infection led to lysis of individual hepatocytes and total monolayer destruction within 18 to 120 hours after infection according to the virus dose used. Virus replication was evidenced by assaying hepatocyte supernates for hemagglutinin and infectivity, immunofluorescent staining and by electron microscopy. Herpes virus infection resulted in polykaryocyte formation followed by nuclear pycnosis and cell lysis. Virus replication was assayed by titration of supernate infectivity. (auth.)

  19. Bidirectional gene sequences with similar homology to functional proteins of alkane degrading bacterium pseudomonas fredriksbergensis DNA

    International Nuclear Information System (INIS)

    The potential for two overlapping fragments of DNA from a clone of newly isolated alkanes degrading bacterium Pseudomonas frederiksbergensis encoding sequences with similar homology to two parts of functional proteins is described. One strand contains a sequence with high homology to alkanes monooxygenase (alkB), a member of the alkanes hydroxylase family, and the other strand contains a sequence with some homology to alcohol dehydrogenase gene (alkJ). Overlapping of the genes on opposite strands has been reported in eukaryotic species, and is now reported in a bacterial species. The sequence comparisons and ORFS results revealed that the regulation and the genes organization involved in alkane oxidation represented in Pseudomonas frederiksberghensis varies among the different known alkane degrading bacteria. The alk gene cluster containing homologues to the known alkane monooxygenase (alkB), and rubredoxin (alkG) are oriented in the same direction, whereas alcohol dehydrogenase (alkJ) is oriented in the opposite direction. Such genomes encode messages on both strands of the DNA, or in an overlapping but different reading frames, of the same strand of DNA. The possibility of creating novel genes from pre-existing sequences, known as overprinting, which is a widespread phenomenon in small viruses. Here, the origin and evolution of the gene overlap to bacteriophages belonging to the family Microviridae have been investigated. Such a phenomenon is most widely described in extremely small genomes such as those of viruses or small plasmids, yet here is a unique phenomenon. (author)

  20. Distribution and stable isotope composition of leaf wax n-alkanes as tracers for organic matter transport along hydrological transects in the NW Argentine Andes

    Science.gov (United States)

    Tofelde, Stefanie; Sachse, Dirk; Schildgen, Taylor; Strecker, Manfred R.

    2015-04-01

    The burial of organic matter in marine sediments represents the main long-term sink for reduced carbon in the global carbon cycle, with the fluvial system being the predominant transport mechanism. Organic matter deposited in marine and continental sediments contains valuable information on ecological and climatic conditions, and organic proxy data is thus often used in paleoclimate research. To use sedimentary records to investigate past environmental conditions in the terrestrial realm, processes dictating the transport of organic matter, including spatial and temporal resolution as well as the influence of climatic and tectonic processes, have to be understood. In this study, we test if a lipid biomarker based approach can be used to trace present-day organic matter sources in a fluvial watershed draining two intermontane basins in the southern-central Andes of NW Argentina, a tectonically active region with pronounced topographic, rainfall, and vegetation gradients. We investigated the distribution of long-chain leaf-wax n-alkanes, a terrestrial plant biomarker (and as such representative of terrestrially sourced carbon), in river sediments and coarse particulate organic matter (CPOM) along two altitudinal and hydrological gradients. We used n-alkane abundances and their stable carbon and hydrogen isotopic values as three independent parameters for source discrimination. Additionally, we analyzed the control of environmental parameters on the isotopic signatures in leaf-wax n-alkanes. The general pattern of n-alkane distribution in river sediments and CPOM samples in our study area suggest that vascular plants are the major source of riverine organic matter. The stable carbon isotopic composition of nC29 alkanes suggests a nearly exclusive input of C3 vegetation. Although C4 plants are present in the lower catchment areas, the total percentage is too low to have a detectable influence on the carbon isotopic composition in river sediment and CPOM samples

  1. The detection and phylogenetic analysis of the alkane 1-monooxygenase gene of members of the genus Rhodococcus.

    Science.gov (United States)

    Táncsics, András; Benedek, Tibor; Szoboszlay, Sándor; Veres, Péter G; Farkas, Milán; Máthé, István; Márialigeti, Károly; Kukolya, József; Lányi, Szabolcs; Kriszt, Balázs

    2015-02-01

    Naturally occurring and anthropogenic petroleum hydrocarbons are potential carbon sources for many bacteria. The AlkB-related alkane hydroxylases, which are integral membrane non-heme iron enzymes, play a key role in the microbial degradation of many of these hydrocarbons. Several members of the genus Rhodococcus are well-known alkane degraders and are known to harbor multiple alkB genes encoding for different alkane 1-monooxygenases. In the present study, 48 Rhodococcus strains, representing 35 species of the genus, were investigated to find out whether there was a dominant type of alkB gene widespread among species of the genus that could be used as a phylogenetic marker. Phylogenetic analysis of rhodococcal alkB gene sequences indicated that a certain type of alkB gene was present in almost every member of the genus Rhodococcus. These alkB genes were common in a unique nucleotide sequence stretch absent from other types of rhodococcal alkB genes that encoded a conserved amino acid motif: WLG(I/V/L)D(G/D)GL. The sequence identity of the targeted alkB gene in Rhodococcus ranged from 78.5 to 99.2% and showed higher nucleotide sequence variation at the inter-species level compared to the 16S rRNA gene (93.9-99.8%). The results indicated that the alkB gene type investigated might be applicable for: (i) differentiating closely related Rhodococcus species, (ii) properly assigning environmental isolates to existing Rhodococcus species, and finally (iii) assessing whether a new Rhodococcus isolate represents a novel species of the genus.

  2. Mononuclear Nonheme High-Spin Iron(III)-Acylperoxo Complexes in Olefin Epoxidation and Alkane Hydroxylation Reactions.

    Science.gov (United States)

    Wang, Bin; Lee, Yong-Min; Clémancey, Martin; Seo, Mi Sook; Sarangi, Ritimukta; Latour, Jean-Marc; Nam, Wonwoo

    2016-02-24

    Mononuclear nonheme high-spin iron(III)-acylperoxo complexes bearing an N-methylated cyclam ligand were synthesized, spectroscopically characterized, and investigated in olefin epoxidation and alkane hydroxylation reactions. In the epoxidation of olefins, epoxides were yielded as the major products with high stereo-, chemo-, and enantioselectivities; cis- and trans-stilbenes were oxidized to cis- and trans-stilbene oxides, respectively. In the epoxidation of cyclohexene, cyclohexene oxide was formed as the major product with a kinetic isotope effect (KIE) value of 1.0, indicating that nonheme iron(III)-acylperoxo complexes prefer C═C epoxidation to allylic C-H bond activation. Olefin epoxidation by chiral iron(III)-acylperoxo complexes afforded epoxides with high enantioselectivity, suggesting that iron(III)-acylperoxo species, not high-valent iron-oxo species, are the epoxidizing agent. In alkane hydroxylation reactions, iron(III)-acylperoxo complexes hydroxylated C-H bonds as strong as those in cyclohexane at -40 °C, wherein (a) alcohols were yielded as the major products with high regio- and stereoselectivities, (b) activation of C-H bonds by the iron(III)-acylperoxo species was the rate-determining step with a large KIE value and good correlation between reaction rates and bond dissociation energies of alkanes, and (c) the oxygen atom in the alcohol product was from the iron(III)-acylperoxo species, not from molecular oxygen. In isotopically labeled water (H2(18)O) experiments, incorporation of (18)O from H2(18)O into oxygenated products was not observed in the epoxidation and hydroxylation reactions. On the basis of mechanistic studies, we conclude that mononuclear nonheme high-spin iron(III)-acylperoxo complexes are strong oxidants capable of oxygenating hydrocarbons prior to their conversion into iron-oxo species via O-O bond cleavage. PMID:26816269

  3. Compositional characteristics of n-alkanes of the glaciers over the Tibetan Plateau and their environmental and climatic significances

    Institute of Scientific and Technical Information of China (English)

    LI QuanLian; WANG NingLian; WU XiaoBo; PU JianChen; HE JianQiao; XIE Jun

    2009-01-01

    State Key Laboratory of Cryospheric Science,Cold and Arid Regions Environmental and Engineering Research Institute,Chinese Academy of Sciences,Lanzhou 730000,ChinaWe report on the concentration and compositional features of n-alkanes of natural and anthropogenic origins in the snow samples collected from the Qiyi glacier in the Qilian Mountains,the Yuzhufeng glacier in eastern Kunlun Mountains,the Xiaodongkemadi glacier in the Tanggula Mountains,and the concentration (T-HCs) from the northeast to the south over the Tibetan Plateau.The T-HCs in these studied areas were close to those in the Belukha and Sofiyskiy glacier,Russian Alati Mountains and the Dasuopu glacier in the Himalaya but were much higher than those in the Greenland ice sheet,suggesting that the mountain glaciers in the Asian continent may receive a higher loading of n-alkanes than the Greenland ice core.Moreover,the compositional characteristics of n-alkanes indicated that the n-alkanes in the studied areas were probably originated from the plant waxes as well as the fossil-fuel combustion exhaust,whereas the contribution from the lower organisms was small.In addition,the plant wax (C_n(wax)) and anthropogenic (non-C_n(wax)) contributions revealed that fast industrialization may have significant effects on the organic pollutant composition in glacier over the Tibetan Plateau and its circumference environment.Particularly,except for the Yuzhufeng glacier,the ∑nC_(21)~-/∑nC_(22)~+ and (nC_(15) +nC_(17)+nC_(19))/(nC_(27)+nC_(29)+nC_(31)) ratio decreased from the Qiyi glacier to the Gurenhekou glacier over the Tibetan Plateau,while the carbon preference index (CPI) values increased.These results indicate a decrease in terrigenous input while an increase in marine input from the northeast to the south over the Tibetan Plateau.These two ratios can be used as the climatic and environmental change indicators.

  4. Untypical even-to-odd predominance in the low-molecular n-alkanes of water, suspended matter, and bottom sediments in some regions of the Arctic Basin

    Science.gov (United States)

    Drozdova, Anastasia; Belyaev, Nikolay; Ponyaev, Mikhail

    2014-05-01

    Over the years, several studies have shown an unusual predominance of even-carbon number n-alkanes in dissolved and particulate phase samples and sediment samples from various regions of the World Ocean [Nachman, 1985; Nishimura and Baker, 1985; Elias et al., 1997]. Different possible sources were proposed such as diagenesis (diagenetic origin from co-occurring fatty acids and alcohols), direct microbial input, microbial degradation of algal detritus, etc. Some researchers, however, are incredulous about this phenomenon and consider relatively high content of even-carbon number n-alkanes as contamination during the experiments. We report here the results of GC and GC-MS analysis of water, suspended particulate matter and sediment samples collected during 7 marine and coastal scientific expeditions to the White and Kara Seas, and to the central Arctic Basin (2004-2013). Many of the above samples (more than 30) present n-alkane distribution with a strong even-carbon number predominance of n-C14H30, and n-C16H34. Maximum enrichment was observed in some suspended matter samples with predominance of n-C16H34. The origin of even-carbon number n-alkanes in marine ecosystems is still not clear. In Antarctic region n-C16 and n-C18 and other even chain n-alkanes were reported to be dominant in the samples of the sea-ice algae, zooplankton and fish [Green et al. 1997] however in the Arctic region this phenomenon has not been demonstrated yet. Increasing of bacteria number and δ13C values observed in course of the accompanying studies [Lein et al., 2013] suggest existence of mechanism of phytoplankton bacterial destruction in the Arctic ecosystems, leading to formation of even-carbon number n-alkanes. R.J. Nachman - Lipids, Vol. 20, No 9, pp. 629-633 (1985). M. Nishimura, E.W. Baker - Geochim. et Cosmochim. Acta, Vol. 50, pp. 299-305 (1986). V.O. Elias, B.R.T. Simoneit, J.N. Cardoso - Naturwissenschaften, Vol. 84, pp. 415-420 (1997). G. Green et al. - Marine Pollution

  5. Glitter in a 2D monolayer.

    Science.gov (United States)

    Yang, Li-Ming; Dornfeld, Matthew; Frauenheim, Thomas; Ganz, Eric

    2015-10-21

    We predict a highly stable and robust atomically thin gold monolayer with a hexagonal close packed lattice stabilized by metallic bonding with contributions from strong relativistic effects and aurophilic interactions. We have shown that the framework of the Au monolayer can survive 10 ps MD annealing simulations up to 1400 K. The framework is also able to survive large motions out of the plane. Due to the smaller number of bonds per atom in the 2D layer compared to the 3D bulk we observe significantly enhanced energy per bond (0.94 vs. 0.52 eV per bond). This is similar to the increase in bond strength going from 3D diamond to 2D graphene. It is a non-magnetic metal, and was found to be the global minima in the 2D space. Phonon dispersion calculations demonstrate high kinetic stability with no negative modes. This 2D gold monolayer corresponds to the top monolayer of the bulk Au(111) face-centered cubic lattice. The close-packed lattice maximizes the aurophilic interactions. We find that the electrons are completely delocalized in the plane and behave as 2D nearly free electron gas. We hope that the present work can inspire the experimental fabrication of novel free standing 2D metal systems.

  6. Rheological behavior of precursor PPV monolayers

    NARCIS (Netherlands)

    Luinge, JW; Nijboer, GW; Hagting, JG; Vorenkamp, EJ; Fuller, GG; Schouten, AJ

    2004-01-01

    The rheological behavior of different precursor poly(p-phenylene vinylene) (prec-PPV) monolayers at the air-water interface was investigated using an interfacial stress rheometer (ISR). This device nicely reveals a transition of the precursor poly(2,5-dimethoxy-1,4 phenylene vinylene) (prec-DMePPV)

  7. Penetration of lipid monolayers by psychoactive drugs

    NARCIS (Netherlands)

    Demel, R.A.; Deenen, L.L.M. van

    1966-01-01

    The ability of a number of psychoactive drugs to penetrate lipid monolayers of varying composition was examined, and the following observation were made: (1) The increase in surface pressure of a monomolecular film appeared to depend on the chemical nature of the lipid as well as on the initial film

  8. Nanotubes based on monolayer blue phosphorus

    KAUST Repository

    Montes, E.

    2016-07-08

    We demonstrate structural stability of monolayer zigzag and armchair blue phosphorus nanotubes by means of molecular dynamics simulations. The vibrational spectrum and electronic band structure are determined and analyzed as functions of the tube diameter and axial strain. The nanotubes are found to be semiconductors with a sensitive indirect band gap that allows flexible tuning.

  9. Quantum capacitance of the monolayer graphene

    OpenAIRE

    Cheremisin, M. V.

    2012-01-01

    The quantum capacitance of the monolayer graphene for arbitrary carrier density, magnetic field and temperature is found. The density dependence of the quantum capacitance is analyzed for magnetic field(temperature) is fixed(varied) and vice versa. The theory is compared with the experimental data.

  10. Semiconductor monolayer assemblies with oriented crystal faces

    KAUST Repository

    Ma, Guijun

    2012-01-01

    Fabrication of two-dimensional monolayers of crystalline oxide and oxynitride particles was attempted on glass plate substrates. X-Ray diffraction patterns of the assemblies show only specific crystal facets, indicative of the uniform orientation of the particles on the substrate. The selectivity afforded by this immobilization technique enables the organization of randomly distributed polycrystalline powders in a controlled manner.

  11. Elasticity of a quantum monolayer solid

    DEFF Research Database (Denmark)

    Bruch, Ludwig Walter

    1992-01-01

    A perturbation-theory formulation of the zero-temperature elastic constants is used to verify symmetry relations for a (monolayer) triangluar lattice. A generalization of the Cauchy relation between the two elastic constants of the triangular lattice with central-pair-potential interactions...

  12. Adsorption of Ions at Uncharged Insoluble Monolayers

    Science.gov (United States)

    Peshkova, T. V.; Minkov, I. L.; Tsekov, R.; Slavchov, R. I.

    2016-08-01

    A method is proposed for the experimental determination of the adsorption of inorganic electrolytes at a surface covered with insoluble surfactant monolayer. This task is complicated by the fact that the change of the salt concentration alters both chemical potentials of the electrolyte and the surfactant. Our method resolves the question by combining data for the surface pressure versus area of the monolayer at several salt concentrations with data for the equilibrium spreading pressure of crystals of the surfactant (used to fix a standard state). We applied the method to alcohols spread at the surface of concentrated halide solutions. The measured salt adsorption is positive and has nonmonotonic dependence on the area per surfactant molecule. For the liquid expanded film, depending on the concentration, there is one couple of ions adsorbed per each 3–30 surfactant molecules. We analyzed which ion, the positive or the negative, stands closer to the surface, by measuring the effect of NaCl on the Volta potential of the monolayer. The potentiometric data suggest that Na+ is specifically adsorbed, while Cl– remains in the diffuse layer, i.e., the surface is positively charged. The observed reverse Hofmeister series of the adsorptions of NaF, NaCl, and NaBr suggests the same conclusion holds for all these salts. The force that causes the adsorption of Na+ seems to be the interaction of the ion with the dipole moment of the monolayer.

  13. Alkane Hydroxylase Gene (alkB Phylotype Composition and Diversity in Northern Gulf of Mexico Bacterioplankton

    Directory of Open Access Journals (Sweden)

    Conor Blake Smith

    2013-12-01

    Full Text Available Natural and anthropogenic activities introduce alkanes into marine systems where they are degraded by alkane hydroxylases expressed by phylogenetically diverse bacteria. Partial sequences for alkB, one of the structural genes of alkane hydroxylase, have been used to assess the composition of alkane-degrading communities, and to determine their responses to hydrocarbon inputs. We present here the first spatially extensive analysis of alkB in bacterioplankton of the northern Gulf of Mexico (nGoM, a region that experiences numerous hydrocarbon inputs. We have analyzed 401 partial alkB gene sequences amplified from genomic extracts collected during March 2010 from 17 water column samples that included surface waters and bathypelagic depths. Previous analyses of 16S rRNA gene sequences for these and related samples have shown that nGoM bacterial community composition and structure stratify strongly with depth, with distinctly different communities above and below 100 m. Although we hypothesized that alkB gene sequences would exhibit a similar pattern, PCA analyses of operational protein units (OPU indicated that community composition did not vary consistently with depth or other major physical-chemical variables. We observed 22 distinct OPUs, one of which was ubiquitous and accounted for 57% of all sequences. This OPU clustered with alkB sequences from known hydrocarbon oxidizers (e.g., Alcanivorax and Marinobacter. Some OPUs could not be associated with known alkane degraders, however, and perhaps represent novel hydrocarbon-oxidizing populations or genes. These results indicate that the capacity for alkane hydrolysis occurs widely in the nGoM, but that alkane degrader diversity varies substantially among sites and responds differently than bulk communities to physical-chemical variables.

  14. Thermal analysis as an aid to forensics: Alkane melting and oxidative stability of wool

    International Nuclear Information System (INIS)

    Interdisciplinary methods and thermal analytical techniques in particular are effective tools in aiding the identification and characterization of materials in question involved in civil or criminal law. Forensic material science uses systematic knowledge of the physical or material world gained through analysis, observation and experimentation. Thermal analytical data can be used to aid the legal system in interpreting technical variations in quite often a complex system.Calorimetry and thermal microscopic methods helped define a commercial product composed of alkanes that was involved in a major law suit. The solid-state structures of a number of normal alkanes have unique crystal structures. These alkanes melt and freeze below room temperature to more than 60C below zero. Mixtures of specific alkanes have attributes of pure chemicals. The X-ray diffraction structure of a mixture of alkanes is the same as a pure alkane, but the melting and freezing temperature are significantly lower than predicted. The jury ruled that the product containing n-alkanes had the appropriate melting characteristics. The thermal-physical properties made a commercial fluid truly unique and there was no advertising infringement according to the law and the jury trialA combination of thermogravimetry, differential thermal analysis, infrared spectroscopy and macrophotography were used to conduct an extensive modeling and analysis of physical evidence obtained in a mobile home fire and explosion. A person's death was allegedly linked to the misuse of a kerosene space heater. The thermal analytical techniques showed that external heating was the cause of the space heater's deformation, not a firing of the heater with gasoline and kerosene. (Copyright (c) 1998 Elsevier Science B.V., Amsterdam. All rights reserved.)

  15. Effect of Structure on the Interactions between Five Natural Antimicrobial Compounds and Phospholipids of Bacterial Cell Membrane on Model Monolayers

    Directory of Open Access Journals (Sweden)

    Stella W. Nowotarska

    2014-06-01

    Full Text Available Monolayers composed of bacterial phospholipids were used as model membranes to study interactions of the naturally occurring phenolic compounds 2,5-dihydroxybenzaldehyde and 2-hydroxy-5-methoxybenzaldehyde, and the plant essential oil compounds carvacrol, cinnamaldehyde, and geraniol, previously found to be active against both Gram-positive and Gram-negative pathogenic microorganisms. The lipid monolayers consist of 1,2-dihexadecanoyl-sn-glycero-3-phosphoethanolamine (DPPE, 1,2-dihexa- decanoyl-sn-glycero-3-phospho-(1'-rac-glycerol (DPPG, and 1,1',2,2'-tetratetradecanoyl cardiolipin (cardiolipin. Surface pressure–area (π-A and surface potential–area (Δψ-A isotherms were measured to monitor changes in the thermodynamic and physical properties of the lipid monolayers. Results of the study indicated that the five compounds modified the three lipid monolayer structures by integrating into the monolayer, forming aggregates of antimicrobial –lipid complexes, reducing the packing effectiveness of the lipids, increasing the membrane fluidity, and altering the total dipole moment in the monolayer membrane model. The interactions of the five antimicrobial compounds with bacterial phospholipids depended on both the structure of the antimicrobials and the composition of the monolayers. The observed experimental results provide insight into the mechanism of the molecular interactions between naturally-occurring antimicrobial compounds and phospholipids of the bacterial cell membrane that govern activities.

  16. Cyclooctane metathesis catalyzed by silica-supported tungsten pentamethyl [(ΞSiO)W(Me)5]: Distribution of macrocyclic alkanes

    KAUST Repository

    Riache, Nassima

    2014-10-03

    Metathesis of cyclic alkanes catalyzed by the new surface complex [(ΞSiO)W(Me)5] affords a wide distribution of cyclic and macrocyclic alkanes. The major products with the formula CnH2n are the result of either a ring contraction or ring expansion of cyclooctane leading to lower unsubstituted cyclic alkanes (5≤n≤7) and to an unprecedented distribution of unsubstituted macrocyclic alkanes (12≤n≤40), respectively, identified by GC/MS and by NMR spectroscopies.

  17. Anaerobic n-Alkane Metabolism by a Sulfate-Reducing Bacterium, Desulfatibacillum aliphaticivorans Strain CV2803T

    OpenAIRE

    Cravo-Laureau, Cristiana; Grossi, Vincent; Raphel, Danielle; Matheron, Robert; Hirschler-Réa, Agnès

    2005-01-01

    The alkane-degrading, sulfate-reducing bacterium Desulfatibacillum aliphaticivorans strain CV2803T, recently isolated from marine sediments, was investigated for n-alkane metabolism. The total cellular fatty acids of this strain had predominantly odd numbers of carbon atoms (C odd) when the strain was grown on a C-odd alkane (pentadecane) and even numbers of carbon atoms (C even) when it was grown on a C-even alkane (hexadecane). Detailed analyses of those fatty acids by gas chromatography/ma...

  18. Strain engineering the magnetic states of vacancy-doped monolayer MoSe2

    International Nuclear Information System (INIS)

    Highlights: • The effects of vacancy defects and biaxial strain on the magnetic property of MoSe2 were investigated. • VSe, VSe2 and VMoSe3 vacancy doped MoSe2 monolayer are nonmagnetic, while VMoSe6 vacancy geometry shows magnetic moment. • The combined vacancy doping and tensile strain can effectively tune the magnetism in MoSe2 monolayer. - Abstract: The effect of vacancy defect and strain on the magnetic property of monolayer MoSe2 was investigated by the first-principles calculation. Firstly, the most stable structure of monolayer MoSe2 and four kinds of vacancy, VSe, VSe2, VMoSe3 and VMoSe6 geometries were systematically studied. Our calculations show that 1H-MoSe2, as well as VSe, VSe2 and VMoSe3 vacancy doped MoSe2 monolayer are nonmagnetic, while VMoSe6 vacancy geometry shows magnetism and the magnetic moment mainly comes from the six Mo atoms around the vacancy although it is most difficult to form. Meanwhile, our calculations indicate that MoSe2 monolayer under tensile strain ranging from 0% to 10% does not show any magnetism. However, it is found that the combined tensile strain and VSe, or VSe2 and VMoSe3 vacancy indeed induce magnetism in MoSe2 monolayer by breaking the Mo–Mo metallic bonds. As for VMoSe6 vacancy geometry, the vacancy induced magnetic moment decrease under the imposed tensile strain

  19. Third O2 addition reactions promote the low-temperature auto-ignition of n-alkanes

    KAUST Repository

    Wang, Zhandong

    2016-01-20

    Comprehensive low-temperature oxidation mechanisms are needed to accurately predict fuel auto-ignition properties. This paper studies the effects of a previously unconsidered third O2 addition reaction scheme on the simulated auto-ignition of n-alkanes. We demonstrate that this extended low-temperature oxidation scheme has a minor effect on the simulation of n-pentane ignition; however, its addition significantly improves the prediction of n-hexane auto-ignition under low-temperature rapid compression machine conditions. Additional simulations of n-hexane in a homogeneous charge compression ignition engine show that engine-operating parameters (e.g., intake temperature and combustion phasing) are significantly altered when the third O2 addition kinetic mechanism is considered. The advanced combustion phasing is initiated by the formation and destruction of additional radical chain-branching intermediates produced in the third O2 addition process, e.g. keto-dihydroperoxides and/or keto-hydroperoxy cyclic ethers. Our results indicate that third O2 addition reactions accelerate low-temperature radical chain branching at conditions of relevance to advance engine technologies, and therefore these chemical pathways should also be considered for n-alkanes with 6 or more carbon atoms. © 2015 The Combustion Institute.

  20. First application of simultaneous SANS and differential scanning calorimetry: Microphase separated alkane blends

    International Nuclear Information System (INIS)

    For almost 30 years, it has been possible at synchrotron facilities to perform small-angle x-ray scattering experiments whilst simultaneously measuring phase transitions using differential scanning calorimetry (DSC). However, a range of challenges exist to enable the collection of simultaneous small-angle neutron scattering (SANS) and DSC data associated not only with intrinsic flux limitations but also scattering geometry and thermal control. The development of a DSC (temperature range ca. −150 C to 500 C) suitable for SANS is detailed here which, to our knowledge, is the first and only one of its kind. An example study is presented from the 40 m SANS instrument, QUOKKA, at the OPAL reactor at ANSTO (Figure 1), concerned with phase transitions in a binary blend of normal alkanes in which one component has been deuterium labelled[1]. The ability to conduct simultaneous DSC and neutron scattering studies allows investigators to use these two complementary techniques to provide insight into structural and thermal changes and opens up the opportunity for SANS to make significant new contributions to a range of systems in which either scattering contrast is insufficient for SAXS studies or where neutron scattering is essential or inherently desirable (e.g. isotope effects).